BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028315
(210 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224113131|ref|XP_002316401.1| predicted protein [Populus trichocarpa]
gi|118482557|gb|ABK93199.1| unknown [Populus trichocarpa]
gi|222865441|gb|EEF02572.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 345 bits (884), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 170/208 (81%), Positives = 184/208 (88%), Gaps = 1/208 (0%)
Query: 3 SKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLK 62
SK NNSYDYSFKILLIGDSGVGKSS+LLS ISNSV D SPTIGVDFKIK+LT+GGKRLK
Sbjct: 6 SKGWNNSYDYSFKILLIGDSGVGKSSLLLSFISNSVRDLSPTIGVDFKIKVLTLGGKRLK 65
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETF NLS +WA+EVELY TNQ C+K
Sbjct: 66 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFENLSDIWAEEVELY-TNQKCIK 124
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
ILVGNKVDRDSER V+REEGM LAQEHKC FLECSAK E+V QCFK+L KI EVPSLL
Sbjct: 125 ILVGNKVDRDSERVVSREEGMALAQEHKCSFLECSAKTRENVLQCFKELTLKISEVPSLL 184
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCCS 210
E GS VV+ QILK+K+V ++ RGG CCS
Sbjct: 185 ENGSVVVRQQILKEKQVYQAPRGGGCCS 212
>gi|359486861|ref|XP_002265762.2| PREDICTED: ras-related protein RABC2a-like [Vitis vinifera]
Length = 215
Score = 335 bits (859), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 167/205 (81%), Positives = 180/205 (87%), Gaps = 3/205 (1%)
Query: 6 GNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
G NSYD SFKILLIGDSGVGKSS+LLS IS SVHD SPTIGVDFKI LLT+GGKRLKLTI
Sbjct: 12 GKNSYDCSFKILLIGDSGVGKSSLLLSFISGSVHDLSPTIGVDFKIMLLTIGGKRLKLTI 71
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERFGTLT+SYYRGAHGIILVYDVTRRE+FTNL VWAKEVELYSTN +C+K LV
Sbjct: 72 WDTAGQERFGTLTNSYYRGAHGIILVYDVTRRESFTNLLDVWAKEVELYSTNHECIKFLV 131
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNKVDRD ERAVTREEGM LAQEHKC FLECSAK E+V+QCFK+L KIL+VPSLLEQG
Sbjct: 132 GNKVDRDCERAVTREEGMSLAQEHKCSFLECSAKTRENVQQCFKELTLKILQVPSLLEQG 191
Query: 186 SAVVKNQILKQKEV-QESARGGNCC 209
S VV+ Q L QKE+ QES R +CC
Sbjct: 192 SRVVERQTLMQKELYQESPR--SCC 214
>gi|296085951|emb|CBI31392.3| unnamed protein product [Vitis vinifera]
Length = 212
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/205 (81%), Positives = 180/205 (87%), Gaps = 3/205 (1%)
Query: 6 GNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
G NSYD SFKILLIGDSGVGKSS+LLS IS SVHD SPTIGVDFKI LLT+GGKRLKLTI
Sbjct: 9 GKNSYDCSFKILLIGDSGVGKSSLLLSFISGSVHDLSPTIGVDFKIMLLTIGGKRLKLTI 68
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERFGTLT+SYYRGAHGIILVYDVTRRE+FTNL VWAKEVELYSTN +C+K LV
Sbjct: 69 WDTAGQERFGTLTNSYYRGAHGIILVYDVTRRESFTNLLDVWAKEVELYSTNHECIKFLV 128
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNKVDRD ERAVTREEGM LAQEHKC FLECSAK E+V+QCFK+L KIL+VPSLLEQG
Sbjct: 129 GNKVDRDCERAVTREEGMSLAQEHKCSFLECSAKTRENVQQCFKELTLKILQVPSLLEQG 188
Query: 186 SAVVKNQILKQKEV-QESARGGNCC 209
S VV+ Q L QKE+ QES R +CC
Sbjct: 189 SRVVERQTLMQKELYQESPR--SCC 211
>gi|224097728|ref|XP_002311057.1| predicted protein [Populus trichocarpa]
gi|222850877|gb|EEE88424.1| predicted protein [Populus trichocarpa]
Length = 214
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/209 (81%), Positives = 186/209 (88%), Gaps = 1/209 (0%)
Query: 3 SKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLK 62
SK GNNSYDYSFKILLIGDSGVGKSS+LLS IS+SV D SPTIGVDFK+K+LTVGGKRLK
Sbjct: 6 SKGGNNSYDYSFKILLIGDSGVGKSSLLLSFISSSVRDLSPTIGVDFKVKMLTVGGKRLK 65
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
LTIWDTAGQERFGTL SSYYRGAHGIILVYDVTRRETF NLS +WAKEVELYSTN D +K
Sbjct: 66 LTIWDTAGQERFGTLISSYYRGAHGIILVYDVTRRETFENLSDIWAKEVELYSTNHDGIK 125
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
ILVGNKVDRDSERAV+REEGM LAQ+HKC F ECSAK +E+V QCFK+L KILEVPSLL
Sbjct: 126 ILVGNKVDRDSERAVSREEGMALAQQHKCSFFECSAKTSENVLQCFKELTLKILEVPSLL 185
Query: 183 EQGSAVVKNQILKQKEVQESAR-GGNCCS 210
E GS VVK QI+K K+V ++ R GG+CCS
Sbjct: 186 ENGSVVVKQQIMKDKQVYQAPRGGGSCCS 214
>gi|255584090|ref|XP_002532788.1| protein with unknown function [Ricinus communis]
gi|223527476|gb|EEF29607.1| protein with unknown function [Ricinus communis]
Length = 251
Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/251 (66%), Positives = 183/251 (72%), Gaps = 47/251 (18%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIW 66
NNSYDYSFKILLIGDSGVGKSSILLS ISNSVHD SPTIGVDFKIK+L+ GGKRLKLTIW
Sbjct: 1 NNSYDYSFKILLIGDSGVGKSSILLSFISNSVHDLSPTIGVDFKIKMLSAGGKRLKLTIW 60
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERFGTL SSYYRGAHGIILVYDVTRRETFTNLS WAKEVELYSTN++C+K+LVG
Sbjct: 61 DTAGQERFGTLISSYYRGAHGIILVYDVTRRETFTNLSDTWAKEVELYSTNKECIKVLVG 120
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDL--------------- 171
NKVDRDSERAV++EEGM LA+EHKC FLECSAK E+V QCFK+L
Sbjct: 121 NKVDRDSERAVSKEEGMALAEEHKCSFLECSAKTRENVLQCFKELSLKISNIVPFYEYVY 180
Query: 172 --------------------------------LYKILEVPSLLEQGSAVVKNQILKQKEV 199
L +ILEVPSLLE GSA VK +LKQK+
Sbjct: 181 CRYVNHTLHAILPYYQRGNFKENFELPEAALILEQILEVPSLLENGSAAVKQHVLKQKQE 240
Query: 200 QESARGGNCCS 210
++ GG CCS
Sbjct: 241 YKALHGGGCCS 251
>gi|356576370|ref|XP_003556305.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 212
Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/210 (74%), Positives = 182/210 (86%), Gaps = 4/210 (1%)
Query: 3 SKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNS--VHDPSPTIGVDFKIKLLTVGGKR 60
S+VG+++YDYSFK+LL+GDSGVGKSS+LLS ISNS ++ SPTIGVDFKIKL TVGGKR
Sbjct: 5 SRVGSSNYDYSFKVLLVGDSGVGKSSLLLSFISNSNSINHLSPTIGVDFKIKLFTVGGKR 64
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKLTIWDTAGQERFGT+ SYYRGAHGIILVYDVTRRETFTNL +WAKEVELYSTN D
Sbjct: 65 LKLTIWDTAGQERFGTVIGSYYRGAHGIILVYDVTRRETFTNLIDIWAKEVELYSTNHDS 124
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+KILVGNKVD++SERAV++EEGM LAQ+H+CLFLECSAK E+V+QCF DL KIL+VPS
Sbjct: 125 IKILVGNKVDKESERAVSKEEGMALAQQHRCLFLECSAKTRENVQQCFNDLTLKILDVPS 184
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCCS 210
L E+GS VK Q KQK + E+++ G CCS
Sbjct: 185 LRERGSVAVKRQ--KQKHIYETSKSGGCCS 212
>gi|217069806|gb|ACJ83263.1| unknown [Medicago truncatula]
gi|388498948|gb|AFK37540.1| unknown [Medicago truncatula]
Length = 212
Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 159/210 (75%), Positives = 180/210 (85%), Gaps = 4/210 (1%)
Query: 3 SKVGNNSYDYSFKILLIGDSGVGKSSILLSLISN--SVHDPSPTIGVDFKIKLLTVGGKR 60
SKVGN++YDYSFK+LLIGDSGVGKSS+LLS ISN S+ D SPTIGVDFKIKL T+G KR
Sbjct: 5 SKVGNSNYDYSFKVLLIGDSGVGKSSLLLSFISNANSLDDLSPTIGVDFKIKLFTIGDKR 64
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKLTIWDTAGQERFGT+ SYYRGAHGI+LVYDVTRRETFTNL WAKEV LYSTN DC
Sbjct: 65 LKLTIWDTAGQERFGTVICSYYRGAHGIVLVYDVTRRETFTNLVGTWAKEVGLYSTNHDC 124
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+KILVGNKVD++SERAV++EEGM LA+EH+CLFLECSAK E+V+QCFKDL KILEVPS
Sbjct: 125 IKILVGNKVDKESERAVSKEEGMALAKEHRCLFLECSAKTKENVQQCFKDLTLKILEVPS 184
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCCS 210
L E+GS VK Q KQK E+++ G CCS
Sbjct: 185 LREKGSVEVKRQ--KQKRFYETSQRGGCCS 212
>gi|356535505|ref|XP_003536285.1| PREDICTED: ras-related protein RABC2a [Glycine max]
gi|255629553|gb|ACU15124.1| unknown [Glycine max]
Length = 212
Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 155/211 (73%), Positives = 179/211 (84%), Gaps = 4/211 (1%)
Query: 2 GSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNS--VHDPSPTIGVDFKIKLLTVGGK 59
S+V +++YDYSFK+LLIGDSGVGKSS+LLS ISNS ++D SPTIGVDFKIKL TVGGK
Sbjct: 4 ASRVESSNYDYSFKVLLIGDSGVGKSSLLLSFISNSNSINDLSPTIGVDFKIKLFTVGGK 63
Query: 60 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQD 119
RLKLTIWDTAGQERFGT+ SSYYRGAHGIILVYDVTRRETFTNL +WAKEVE YSTN
Sbjct: 64 RLKLTIWDTAGQERFGTVISSYYRGAHGIILVYDVTRRETFTNLIDIWAKEVERYSTNHG 123
Query: 120 CVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVP 179
+KILVGNKVD+DSERAV++EEGM LAQ+H+CLFLECSAK E+V+QCF DL KIL+VP
Sbjct: 124 SIKILVGNKVDKDSERAVSKEEGMALAQQHRCLFLECSAKTRENVQQCFNDLTLKILDVP 183
Query: 180 SLLEQGSAVVKNQILKQKEVQESARGGNCCS 210
L E+GS VK Q KQK + E+++ CCS
Sbjct: 184 GLREKGSVAVKRQ--KQKHIYETSQSAGCCS 212
>gi|224138818|ref|XP_002322909.1| predicted protein [Populus trichocarpa]
gi|222867539|gb|EEF04670.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 158/210 (75%), Positives = 176/210 (83%), Gaps = 2/210 (0%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
MGS G SYD SFKILLIGDSGVGKSS+L+S IS+SV D +PTIGVDFKIK LTVGGKR
Sbjct: 1 MGSSSG--SYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKR 58
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKLTIWDTAGQERF TLTSSYYR A GIILVYDVTRRETFTNLS VW KEVEL+STNQDC
Sbjct: 59 LKLTIWDTAGQERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWGKEVELFSTNQDC 118
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
VK+LVGNKVD++S R VT++EGM LA++H CLFLECSAK E+V+QCF++L KI+EVPS
Sbjct: 119 VKMLVGNKVDKESGRDVTKDEGMALAKQHGCLFLECSAKTRENVEQCFEELALKIMEVPS 178
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCCS 210
LLE+GS VK ILKQK A G CCS
Sbjct: 179 LLEEGSTAVKRNILKQKPEHHVASNGGCCS 208
>gi|18414255|ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana]
gi|297810433|ref|XP_002873100.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75098916|sp|O49841.1|RAC2A_ARATH RecName: Full=Ras-related protein RABC2a; Short=AtRABC2a; AltName:
Full=Ras-related protein Rab18B; Short=AtRab18B
gi|2723477|dbj|BAA24074.1| GTP-binding protein [Arabidopsis thaliana]
gi|7378638|emb|CAB83314.1| AtRab GTP-binding protein [Arabidopsis thaliana]
gi|26453054|dbj|BAC43603.1| putative AtRab GTP-binding protein [Arabidopsis thaliana]
gi|29824251|gb|AAP04086.1| unknown protein [Arabidopsis thaliana]
gi|297318937|gb|EFH49359.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332003236|gb|AED90619.1| RAB GTPase-C2A [Arabidopsis thaliana]
Length = 210
Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/210 (72%), Positives = 177/210 (84%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
MGS G + YD SFKILLIGDSGVGKSS+L+S IS+SV D +PTIGVDFKIK LTVGGKR
Sbjct: 1 MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKR 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNL VW KE+ELYSTNQ+C
Sbjct: 61 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQEC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
V++LVGNKVDR+SER V+REEG+ LA+E C+FLECSA+ ++V+QCF++L KI+EVPS
Sbjct: 121 VRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPS 180
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCCS 210
LLE+GS+ VK ILKQK ++ CCS
Sbjct: 181 LLEEGSSAVKRNILKQKPEHQTNTQSGCCS 210
>gi|356505277|ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 211
Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 153/201 (76%), Positives = 173/201 (86%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
YD SFKILLIGDSGVGKSS+L+S IS+SV D SPTIGVDFKIK LTVGGKRLKLTIWDTA
Sbjct: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLSPTIGVDFKIKTLTVGGKRLKLTIWDTA 70
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TL SSYYR A GIILVYDVTRRETFTNLS VW+KEVELYSTNQDCVKILVGNKV
Sbjct: 71 GQERFRTLNSSYYRKAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCVKILVGNKV 130
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
DRD+ERAV+REEG+ LA+E CL LECSAK E+V+QCF++L KI+E PSLLE+GS V
Sbjct: 131 DRDTERAVSREEGLALAKELGCLLLECSAKTRENVEQCFEELALKIMEAPSLLEEGSTAV 190
Query: 190 KNQILKQKEVQESARGGNCCS 210
K +LK K+ ++++ G CCS
Sbjct: 191 KRSVLKPKQESQASQNGGCCS 211
>gi|1370172|emb|CAA98163.1| RAB1X [Lotus japonicus]
Length = 208
Score = 316 bits (810), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 150/201 (74%), Positives = 175/201 (87%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
YD SFKILLIGDSGVGKSS+L+S IS+SV D SPTIGVDFKIK+LTVGGKRLKLT+WDTA
Sbjct: 8 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDQSPTIGVDFKIKMLTVGGKRLKLTLWDTA 67
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GIILVYDVT+RETFTNLS VW+KE+ELYS NQDCVK+LVGNKV
Sbjct: 68 GQERFRTLTSSYYRGAQGIILVYDVTKRETFTNLSEVWSKELELYSNNQDCVKMLVGNKV 127
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
DRD+ RAV+REEG+ LA+E CL +ECSAK E+V+QCF++L KI+E PSLLE+GS V
Sbjct: 128 DRDAARAVSREEGLALAKELGCLLIECSAKTRENVEQCFEELALKIMEAPSLLEEGSTAV 187
Query: 190 KNQILKQKEVQESARGGNCCS 210
K ILKQK+ ++++ G CCS
Sbjct: 188 KRNILKQKQEPQASQHGGCCS 208
>gi|224069599|ref|XP_002326383.1| predicted protein [Populus trichocarpa]
gi|222833576|gb|EEE72053.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 155/202 (76%), Positives = 173/202 (85%), Gaps = 1/202 (0%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
YD SFKILLIGDSGVGKSS+L+S IS+SV D +PTIGVDFKIK LTVGGKRLKLTIWDTA
Sbjct: 12 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDIAPTIGVDFKIKQLTVGGKRLKLTIWDTA 71
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYR A GIILVYDVTRRETFTNLS VW KEV+LYSTNQDCVK+LVGNKV
Sbjct: 72 GQERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWTKEVDLYSTNQDCVKMLVGNKV 131
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D+DSER VTR+EGM LA+EH C FLECSAK ++V+QCF++L KI+EVPSL+E+GS V
Sbjct: 132 DKDSERDVTRDEGMSLAKEHGCTFLECSAKTRQNVEQCFEELALKIMEVPSLMEEGSTAV 191
Query: 190 KNQILKQKEVQE-SARGGNCCS 210
K ILKQK Q + GG CCS
Sbjct: 192 KRNILKQKPDQHPPSSGGGCCS 213
>gi|449465314|ref|XP_004150373.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
gi|449513018|ref|XP_004164205.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
Length = 215
Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 158/205 (77%), Positives = 179/205 (87%), Gaps = 6/205 (2%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDT 68
SYDYSFKILLIGDSGVGKSSILLS ISN VHD SPTIGVDFKIK++TVGGK+LKLTIWDT
Sbjct: 12 SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGGKKLKLTIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL +VWAKEVELY TN++C+KILVGNK
Sbjct: 72 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNRECIKILVGNK 131
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
VDR S+RAVT EEGM +A++HK LFLECSA+ E+V +CFK+L K++EVPSLLE GS V
Sbjct: 132 VDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEVPSLLENGSVV 191
Query: 189 VKNQIL----KQKEVQESARGGNCC 209
VK +IL +KEV+ + RG CC
Sbjct: 192 VKQKILDKTQARKEVEVNDRG--CC 214
>gi|356533295|ref|XP_003535201.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 212
Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 155/212 (73%), Positives = 180/212 (84%), Gaps = 2/212 (0%)
Query: 1 MGSKVGNNS-YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGK 59
M S G +S YD SFKILLIGDS VGKSS+L+S ISNS D +PTIGVDFKIK+LTVGGK
Sbjct: 1 MNSSSGQSSGYDLSFKILLIGDSAVGKSSLLVSFISNSAEDIAPTIGVDFKIKMLTVGGK 60
Query: 60 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQD 119
RLKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRR+TFTNLS VW+KEVELYSTNQ+
Sbjct: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSEVWSKEVELYSTNQN 120
Query: 120 CVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVP 179
CVK+LVGNKVDRDSER V++EEG+ LA+E CLF ECSAK E+V++CF++L KI+EVP
Sbjct: 121 CVKMLVGNKVDRDSERVVSKEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVP 180
Query: 180 SLLEQGSAVVKNQILKQKEVQ-ESARGGNCCS 210
SLLE+GS VK ILKQ++ Q +++ G CCS
Sbjct: 181 SLLEEGSTAVKRNILKQQQEQPQASEFGGCCS 212
>gi|356548355|ref|XP_003542568.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 211
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 150/201 (74%), Positives = 174/201 (86%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
YD SFKILLIGDS VGKSS+L+S ISNS D +PTIGVDFKIK+LTVGGKRLKLTIWDTA
Sbjct: 11 YDLSFKILLIGDSAVGKSSLLVSFISNSAEDIAPTIGVDFKIKMLTVGGKRLKLTIWDTA 70
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GIILVYDVTRR+TFTNLS VW+KEVELYSTNQ+CVK+LVGNKV
Sbjct: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSLVWSKEVELYSTNQNCVKMLVGNKV 130
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
DRDSER V++EEG+ LA+E CLF ECSAK E+V++CF++L KI+EVPSLLE+GS V
Sbjct: 131 DRDSERVVSKEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVPSLLEEGSTAV 190
Query: 190 KNQILKQKEVQESARGGNCCS 210
K ILKQ++ +++ G CCS
Sbjct: 191 KRNILKQQQQPQASEFGGCCS 211
>gi|225441147|ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis vinifera]
gi|297739985|emb|CBI30167.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/201 (76%), Positives = 171/201 (85%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
YD SFKILLIGDS VGKSS+L+S IS+SV D +PTIGVDFKIK LTVGGKRLKLTIWDTA
Sbjct: 11 YDLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTA 70
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GIILVYDVTRRE+FTNLS VWAKEVELYSTNQDCVK+LVGNKV
Sbjct: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRESFTNLSDVWAKEVELYSTNQDCVKMLVGNKV 130
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
DR+SER V+REEG+ LA+EH CLF ECSAK E+V++CF++L KI+EVPSLLE+GS V
Sbjct: 131 DRESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVPSLLEEGSTVG 190
Query: 190 KNQILKQKEVQESARGGNCCS 210
K ILK K + G CCS
Sbjct: 191 KRNILKPKPENQPPPTGGCCS 211
>gi|388503938|gb|AFK40035.1| unknown [Medicago truncatula]
Length = 214
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 151/202 (74%), Positives = 176/202 (87%), Gaps = 1/202 (0%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTIWDT 68
+D SFKILLIGDSGVGKS +L++ ISNS V D SPTIGVDFKIK+LTVGGKRLKLTIWDT
Sbjct: 13 HDLSFKILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGGKRLKLTIWDT 72
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF TLTSSYYRGA GIILVYDVTRRETFTNLS VW+KE+ELYSTNQ+CVK+LVGNK
Sbjct: 73 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQECVKMLVGNK 132
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
VD+DSERAV+REEG+ LA+E CL LECSAK E+V++CF++L KI+E PSLLE+GSA
Sbjct: 133 VDKDSERAVSREEGLSLAKELGCLLLECSAKTRENVEKCFEELALKIMEAPSLLEEGSAA 192
Query: 189 VKNQILKQKEVQESARGGNCCS 210
K +LKQK+ +S++ G CCS
Sbjct: 193 TKRNVLKQKQEPQSSQNGGCCS 214
>gi|255645626|gb|ACU23307.1| unknown [Glycine max]
Length = 211
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/201 (74%), Positives = 173/201 (86%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
YD SFKILLIGDS VGKSS+L+S ISNS +PTIGVDFKIK+LTVGGKRLKLTIWDTA
Sbjct: 11 YDLSFKILLIGDSAVGKSSLLVSFISNSAEGIAPTIGVDFKIKMLTVGGKRLKLTIWDTA 70
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GIILVYDVTRR+TFTNLS VW+KEVELYSTNQ+CVK+LVGNKV
Sbjct: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSLVWSKEVELYSTNQNCVKMLVGNKV 130
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
DRDSER V++EEG+ LA+E CLF ECSAK E+V++CF++L KI+EVPSLLE+GS V
Sbjct: 131 DRDSERVVSKEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVPSLLEEGSTAV 190
Query: 190 KNQILKQKEVQESARGGNCCS 210
K ILKQ++ +++ G CCS
Sbjct: 191 KRNILKQQQQPQASEFGGCCS 211
>gi|449440149|ref|XP_004137847.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
gi|449501036|ref|XP_004161260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABC2a-like
[Cucumis sativus]
Length = 210
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/210 (73%), Positives = 176/210 (83%), Gaps = 2/210 (0%)
Query: 1 MGSKVGNNS-YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGK 59
MGS G +S YD SFK+LLIGDSGVGKSS+LLS IS + + +PTIGVDFKIKLL VGGK
Sbjct: 1 MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
Query: 60 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQD 119
RLKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNLS VWAKEVELYSTN+D
Sbjct: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
Query: 120 CVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVP 179
CVK+L+GNKVDR+SERAV+REEG+ LA+ FLECSAK E+V++CF+DL KI+E P
Sbjct: 121 CVKMLIGNKVDRESERAVSREEGIALAKVLGSYFLECSAKTRENVEKCFEDLALKIMEAP 180
Query: 180 SLLEQGSAVVKNQILKQKEVQESARGGNCC 209
SL+E+GS VVK ILKQ+E Q A +CC
Sbjct: 181 SLIEEGSTVVKRNILKQQEFQ-PASTTSCC 209
>gi|255556838|ref|XP_002519452.1| protein with unknown function [Ricinus communis]
gi|223541315|gb|EEF42866.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/204 (74%), Positives = 170/204 (83%), Gaps = 3/204 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
YD SFKILLIGDSGVGKSS+L+S IS+SV D +PTIGVDFKIK LTV GKRLKLTIWDTA
Sbjct: 13 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVDGKRLKLTIWDTA 72
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYR A GIILVYDVTRRETFTNLS VWAKEV+LY TN+DCVK+LVGNK+
Sbjct: 73 GQERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWAKEVDLYCTNKDCVKMLVGNKL 132
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D DSERAV+REEGM LA+EH C FLECSAK E+V++CF++L KI+EVPSLLE+GS V
Sbjct: 133 DIDSERAVSREEGMALAKEHGCAFLECSAKTRENVEKCFEELALKIMEVPSLLEEGSTAV 192
Query: 190 KNQILKQK---EVQESARGGNCCS 210
K +IL QK + S CCS
Sbjct: 193 KKKILNQKQENQAPPSRANTGCCS 216
>gi|357114065|ref|XP_003558821.1| PREDICTED: ras-related protein RABC2a-like [Brachypodium
distachyon]
Length = 212
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 175/211 (82%), Gaps = 2/211 (0%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSV--HDPSPTIGVDFKIKLLTVGG 58
MG+ G +SYD SFKILLIGDS VGKSS+L+S +S S HD SPTIGVDFKIK LTVG
Sbjct: 1 MGTSPGTSSYDCSFKILLIGDSAVGKSSLLVSFVSASPTDHDISPTIGVDFKIKFLTVGE 60
Query: 59 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQ 118
K+LKLTIWDTAGQERF T+TSSYYRGAHGIILVYDVT+R++FTNL+ VWAKE+EL+STN+
Sbjct: 61 KKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNK 120
Query: 119 DCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV 178
+CVK+LVGNKVD+D ER VTREEG+ AQE CLFLE SAK E+V++CF++L KILEV
Sbjct: 121 ECVKMLVGNKVDKDEERMVTREEGLAFAQECGCLFLESSAKTRENVEKCFEELALKILEV 180
Query: 179 PSLLEQGSAVVKNQILKQKEVQESARGGNCC 209
PSL E+GS+VVK LKQK+ + GG CC
Sbjct: 181 PSLSEEGSSVVKRNSLKQKQENNAKHGGGCC 211
>gi|226503041|ref|NP_001149268.1| ras-related protein Rab-18 [Zea mays]
gi|195625924|gb|ACG34792.1| ras-related protein Rab-18 [Zea mays]
gi|223972897|gb|ACN30636.1| unknown [Zea mays]
gi|413920116|gb|AFW60048.1| Ras protein Rab-18 [Zea mays]
Length = 215
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 133/200 (66%), Positives = 166/200 (83%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DY FK+LLIGDSGVGKSS+LL ++S D SPTIGVDFK+K++T+GGK+LKL IWDTA
Sbjct: 16 FDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVTIGGKKLKLAIWDTA 75
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA G+I+VYDVTRRETFTNLS +WAKE++LYSTNQDC+K+LVGNKV
Sbjct: 76 GQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 135
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D++SERAVT++EG+ A+E+ CLFLECSAK +V+QCF++L+ KIL+ PSLL S+
Sbjct: 136 DKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADASSGA 195
Query: 190 KNQILKQKEVQESARGGNCC 209
K I KQK + A +CC
Sbjct: 196 KKNIFKQKPPEADAAASSCC 215
>gi|351723071|ref|NP_001236498.1| uncharacterized protein LOC100527726 [Glycine max]
gi|255633056|gb|ACU16883.1| unknown [Glycine max]
Length = 194
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/181 (78%), Positives = 158/181 (87%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
YD SFKILLIGDSGVGKSS+L+S IS+SV D SPTIGVDFKIK LTVGGKRLKLTIWDTA
Sbjct: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLSPTIGVDFKIKTLTVGGKRLKLTIWDTA 70
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TL SSYYR A GIILVYDVTRRETFTNLS VW+KEVELYSTNQDCVKILVGNKV
Sbjct: 71 GQERFRTLNSSYYRKAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCVKILVGNKV 130
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
DRD+ERAV+REEG+ LA++ CL LECSAK E+V+QCF++L KI+E PSLLE+ +
Sbjct: 131 DRDTERAVSREEGLALAKDLGCLLLECSAKTRENVEQCFEELALKIMEAPSLLEEDQQQL 190
Query: 190 K 190
K
Sbjct: 191 K 191
>gi|225457841|ref|XP_002267387.1| PREDICTED: ras-related protein RABC1 isoform 1 [Vitis vinifera]
gi|359492296|ref|XP_003634396.1| PREDICTED: ras-related protein RABC1 [Vitis vinifera]
Length = 211
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/200 (67%), Positives = 166/200 (83%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DY FK+LLIGDSGVGKS++LLS SN+ D SPTIGVDFK+K + +GGK+LKL IWDTA
Sbjct: 12 FDYLFKLLLIGDSGVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGKKLKLAIWDTA 71
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA G+I+VYDVTRRETFTNLS +WAKE++LYSTNQDC+K+LVGNKV
Sbjct: 72 GQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 131
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D++SER VT++EG+ A+E+ CLFLECSAK +V+QCF++L+ KILE PSLL +GS+ V
Sbjct: 132 DKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLLAEGSSGV 191
Query: 190 KNQILKQKEVQESARGGNCC 209
+ I KQK + A CC
Sbjct: 192 RKNIFKQKPPESDASTSGCC 211
>gi|302142732|emb|CBI19935.3| unnamed protein product [Vitis vinifera]
Length = 307
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/200 (67%), Positives = 166/200 (83%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DY FK+LLIGDSGVGKS++LLS SN+ D SPTIGVDFK+K + +GGK+LKL IWDTA
Sbjct: 108 FDYLFKLLLIGDSGVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGKKLKLAIWDTA 167
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA G+I+VYDVTRRETFTNLS +WAKE++LYSTNQDC+K+LVGNKV
Sbjct: 168 GQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 227
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D++SER VT++EG+ A+E+ CLFLECSAK +V+QCF++L+ KILE PSLL +GS+ V
Sbjct: 228 DKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLLAEGSSGV 287
Query: 190 KNQILKQKEVQESARGGNCC 209
+ I KQK + A CC
Sbjct: 288 RKNIFKQKPPESDASTSGCC 307
>gi|357166898|ref|XP_003580906.1| PREDICTED: ras-related protein RABC1-like [Brachypodium distachyon]
Length = 215
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 133/200 (66%), Positives = 164/200 (82%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DY FK+LLIGDSGVGKSS+LL ++S D SPTIGVDFK+K++ + GK+LKL IWDTA
Sbjct: 16 FDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVNIAGKKLKLAIWDTA 75
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GII+VYDVTRRETFTNLS +WAKE++LYSTNQDC+K+LVGNKV
Sbjct: 76 GQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 135
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D++SERAVT++EG+ A+E+ CLFLECSAK +V+QCF++L+ KIL+ PSLL S+
Sbjct: 136 DKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADASSGA 195
Query: 190 KNQILKQKEVQESARGGNCC 209
K I KQK + A G CC
Sbjct: 196 KKNIFKQKAPEADAAAGGCC 215
>gi|115450707|ref|NP_001048954.1| Os03g0146000 [Oryza sativa Japonica Group]
gi|15451614|gb|AAK98738.1|AC090485_17 Putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108706165|gb|ABF93960.1| Ras family protein, expressed [Oryza sativa Japonica Group]
gi|113547425|dbj|BAF10868.1| Os03g0146000 [Oryza sativa Japonica Group]
gi|125542397|gb|EAY88536.1| hypothetical protein OsI_10009 [Oryza sativa Indica Group]
gi|125584909|gb|EAZ25573.1| hypothetical protein OsJ_09398 [Oryza sativa Japonica Group]
gi|215692396|dbj|BAG87816.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 210
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/204 (69%), Positives = 170/204 (83%), Gaps = 3/204 (1%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTI 65
+SYD SFKILLIGDS VGKSS+L+S +S S D +PTIGVDFKIK LTV GK+LKLTI
Sbjct: 7 SSYDCSFKILLIGDSAVGKSSLLVSFVSASHIDDEIAPTIGVDFKIKFLTVNGKKLKLTI 66
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF +TSSYYRGAHGIILVYDVT+RE+FTNL+ VWAKE+EL+STN++C+K+LV
Sbjct: 67 WDTAGQERFRGITSSYYRGAHGIILVYDVTKRESFTNLADVWAKEIELHSTNKECIKMLV 126
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNKVD++ ER VTREEG+ AQE CLFLE SAK E+V++CF++L KILEVPSLLE+G
Sbjct: 127 GNKVDKNEERMVTREEGLAFAQESGCLFLESSAKTRENVEKCFEELALKILEVPSLLEEG 186
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
S+VVK LKQK + A+ G CC
Sbjct: 187 SSVVKRNSLKQKH-ENKAKNGGCC 209
>gi|297852170|ref|XP_002893966.1| hypothetical protein ARALYDRAFT_473785 [Arabidopsis lyrata subsp.
lyrata]
gi|297339808|gb|EFH70225.1| hypothetical protein ARALYDRAFT_473785 [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 136/200 (68%), Positives = 165/200 (82%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
MGS G +DY FK+LLIGDSGVGKSS+LLS SN+ D SPTIGVDFK+K LT+G K+
Sbjct: 1 MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNLS +WAKE++LYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K+LVGNKVD++SERAV+++EG+ A+E+ CLFLECSAK +V+QCF++L+ KILE PS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180
Query: 181 LLEQGSAVVKNQILKQKEVQ 200
L +GS+ K I KQ Q
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQ 200
>gi|15218575|ref|NP_175056.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|145324172|ref|NP_001077675.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|186488925|ref|NP_001117435.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|75097949|sp|O23657.1|RABC1_ARATH RecName: Full=Ras-related protein RABC1; Short=AtRABC1; AltName:
Full=Ras-related protein Rab18; Short=AtRab18
gi|7523663|gb|AAF63103.1|AC006423_4 AtRab18 [Arabidopsis thaliana]
gi|13878001|gb|AAK44078.1|AF370263_1 putative GTP-binding protein RAB1Y [Arabidopsis thaliana]
gi|2231312|gb|AAB61997.1| AtRab18 [Arabidopsis thaliana]
gi|17104731|gb|AAL34254.1| putative GTP-binding protein RAB1Y [Arabidopsis thaliana]
gi|21555736|gb|AAM63924.1| GTP-binding protein(RAB1Y), putative [Arabidopsis thaliana]
gi|110743628|dbj|BAE99651.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332193882|gb|AEE32003.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|332193883|gb|AEE32004.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|332193884|gb|AEE32005.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
Length = 212
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 136/200 (68%), Positives = 165/200 (82%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
MGS G +DY FK+LLIGDSGVGKSS+LLS SN+ D SPTIGVDFK+K LT+G K+
Sbjct: 1 MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNLS +WAKE++LYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K+LVGNKVD++SERAV+++EG+ A+E+ CLFLECSAK +V+QCF++L+ KILE PS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180
Query: 181 LLEQGSAVVKNQILKQKEVQ 200
L +GS+ K I KQ Q
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQ 200
>gi|223947433|gb|ACN27800.1| unknown [Zea mays]
gi|413957007|gb|AFW89656.1| hypothetical protein ZEAMMB73_805451 [Zea mays]
Length = 309
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/206 (66%), Positives = 172/206 (83%), Gaps = 5/206 (2%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVH---DPSPTIGVDFKIKLLTVGGKRLKLT 64
+SYD SFK+LLIGDS VGKSS+L+S +S + H D +PTIGVDFKI L+VGGK+LKLT
Sbjct: 104 SSYDCSFKVLLIGDSAVGKSSLLVSFVS-AAHIDDDIAPTIGVDFKINFLSVGGKKLKLT 162
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+TSSYYRGAHGIILVYDVT+RE+FTNL+ VW KE+EL+STN++C+K+L
Sbjct: 163 IWDTAGQERFRTITSSYYRGAHGIILVYDVTKRESFTNLADVWTKEIELHSTNKECIKML 222
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
VGNKVD+D +R VT+EEG+ AQE CLF+E SAK E+V++CF++L KIL+VPSLLE+
Sbjct: 223 VGNKVDKDEDRMVTKEEGLAFAQERGCLFVESSAKTRENVEKCFEELALKILQVPSLLEE 282
Query: 185 GSAVVKNQILKQKEVQESA-RGGNCC 209
GS+VVK L K+ QE+A R G CC
Sbjct: 283 GSSVVKRNTLTLKQKQENANRSGGCC 308
>gi|255558462|ref|XP_002520256.1| protein phosphatase 2c, putative [Ricinus communis]
gi|223540475|gb|EEF42042.1| protein phosphatase 2c, putative [Ricinus communis]
Length = 571
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/210 (65%), Positives = 170/210 (80%), Gaps = 1/210 (0%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
M S +DY FK+LLIGDSGVGKSS+LLS SN+ D SPTIGVDFK+K +T+GGK+
Sbjct: 1 MESSSSQPEFDYLFKLLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKHVTIGGKK 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNLS +WAKE++LYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K+LVGNKVD++SE VT++EG+ A+++ CLFLECSAK +V+QCF++L+ KILE PS
Sbjct: 121 IKMLVGNKVDKESEIVVTKKEGIEFARQYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCCS 210
LL +GS+ VK I KQK Q+ +CC+
Sbjct: 181 LLAEGSSGVKRNIFKQKPPQD-VPTSSCCT 209
>gi|242077810|ref|XP_002448841.1| hypothetical protein SORBIDRAFT_06g034200 [Sorghum bicolor]
gi|241940024|gb|EES13169.1| hypothetical protein SORBIDRAFT_06g034200 [Sorghum bicolor]
Length = 215
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 132/200 (66%), Positives = 165/200 (82%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DY FK+LLIGDSGVGKSS+LL ++S D SPTIGVDFK+K++++GGK+LKL IWDTA
Sbjct: 16 FDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVSIGGKKLKLAIWDTA 75
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GII+VYDVTRRETFTNLS +WAKE++LYSTNQDC+K+LVGNKV
Sbjct: 76 GQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 135
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D++SER VT++EG+ A+E+ CLFLECSAK +V+QCF++L+ KIL+ PSLL S+
Sbjct: 136 DKESERCVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADASSGA 195
Query: 190 KNQILKQKEVQESARGGNCC 209
K I KQK + A +CC
Sbjct: 196 KKNIFKQKPPEADAAASSCC 215
>gi|242042233|ref|XP_002468511.1| hypothetical protein SORBIDRAFT_01g047150 [Sorghum bicolor]
gi|241922365|gb|EER95509.1| hypothetical protein SORBIDRAFT_01g047150 [Sorghum bicolor]
Length = 210
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/205 (68%), Positives = 173/205 (84%), Gaps = 5/205 (2%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVH---DPSPTIGVDFKIKLLTVGGKRLKLT 64
+SYD SFK+LLIGDS VGKSS+L+S +S + H D +PTIGVDFKIK L+VGGK+LKLT
Sbjct: 7 SSYDCSFKVLLIGDSAVGKSSLLVSFVS-AAHIDDDIAPTIGVDFKIKFLSVGGKKLKLT 65
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+TSSYYRGAHGIILVYDVT+RE+FTNL+ VW KE+EL+STN++CVK+L
Sbjct: 66 IWDTAGQERFRTITSSYYRGAHGIILVYDVTKRESFTNLAEVWTKEIELHSTNKECVKML 125
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
VGNKVD+D +R VT+EEG+ AQE CLF+E SAK E+V++CF++L KILEVPSLLE+
Sbjct: 126 VGNKVDKDEDRMVTKEEGLAFAQECGCLFVESSAKTRENVEKCFEELALKILEVPSLLEE 185
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
GS+VVK LKQK+ + S + G CC
Sbjct: 186 GSSVVKRNTLKQKQ-ENSNQSGGCC 209
>gi|308080195|ref|NP_001183679.1| putative NAC domain transcription factor superfamily protein [Zea
mays]
gi|238013812|gb|ACR37941.1| unknown [Zea mays]
gi|414586248|tpg|DAA36819.1| TPA: putative NAC domain transcription factor superfamily protein
[Zea mays]
Length = 215
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/202 (66%), Positives = 168/202 (83%), Gaps = 2/202 (0%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DY FK+LLIGDSGVGKSS+LL ++S D SPTIGVDFK+K++++GGK+LKL IWDTA
Sbjct: 14 FDYLFKLLLIGDSGVGKSSLLLRFTADSFDDLSPTIGVDFKVKMVSIGGKKLKLAIWDTA 73
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GII+VYDV+RRETFTNLS +WAKE++LYSTNQDCVK+LVGNKV
Sbjct: 74 GQERFRTLTSSYYRGAQGIIMVYDVSRRETFTNLSDIWAKEIDLYSTNQDCVKMLVGNKV 133
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA-- 187
D++SERAVT++EG+ A+E+ CLFLECSAK +V+QCF++L+ KIL+ PSLL S+
Sbjct: 134 DKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADASSAG 193
Query: 188 VVKNQILKQKEVQESARGGNCC 209
V K I KQK + A G+CC
Sbjct: 194 VSKKNIFKQKAPEADAATGSCC 215
>gi|351725909|ref|NP_001235829.1| uncharacterized protein LOC100499773 [Glycine max]
gi|255626443|gb|ACU13566.1| unknown [Glycine max]
Length = 215
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 134/201 (66%), Positives = 164/201 (81%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DY FK+LLIGDSGVGKS++LLS S++ D SPTIGVDFK+K +T+GGK+ KL IWDTA
Sbjct: 14 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTMGGKKSKLAIWDTA 73
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GII+VYDVTRRETFTNLS +WAKE++LYSTNQDC+K+LVGNKV
Sbjct: 74 GQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 133
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D++SER V+++EG+ A+E+ CL+ ECSAK +V QCF +L+ KILE PSLL +GS+ V
Sbjct: 134 DKESERVVSKKEGIDFAREYGCLYTECSAKTRVNVAQCFDELVMKILETPSLLAEGSSGV 193
Query: 190 KNQILKQKEVQESARGGNCCS 210
K I KQK Q A CCS
Sbjct: 194 KKNIFKQKPPQSDASSSGCCS 214
>gi|388517279|gb|AFK46701.1| unknown [Lotus japonicus]
Length = 209
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 167/209 (79%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
M S +DY FK+L+IGDSGVGKSS+LLS S+ D SPTIGVDFK+K + +GGK+
Sbjct: 1 MDSSSAPQEFDYLFKLLMIGDSGVGKSSLLLSFTSDEFQDMSPTIGVDFKVKYVAIGGKK 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNLS +WAKE++LYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K+LVGNKVD++S+R V+++EG+ A+E+ CLF+ECSAK +V+QCF++L+ KIL+ PS
Sbjct: 121 IKMLVGNKVDKESDRVVSKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
LL +GS VK I K K+ Q A +CC
Sbjct: 181 LLAEGSKGVKKNIFKDKQPQADASTSSCC 209
>gi|224080973|ref|XP_002306250.1| predicted protein [Populus trichocarpa]
gi|222855699|gb|EEE93246.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 133/209 (63%), Positives = 167/209 (79%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
M S +DY FK+L+IGDSGVGKSS+LLS S++ D SPTIGVDFK+K + +GGK
Sbjct: 1 MDSSSNAPEFDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLSPTIGVDFKVKFVNIGGKN 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNLS +WAKE++LYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K+LVGNKVD++S+RAVT++EG+ A+E+ CLF+ECSAK +V+QCF++L+ KIL+ PS
Sbjct: 121 IKMLVGNKVDKESDRAVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
LL +GS VK I +K Q A +CC
Sbjct: 181 LLAEGSKGVKKNIFSEKRPQPDASTSSCC 209
>gi|449459232|ref|XP_004147350.1| PREDICTED: ras-related protein RABC1-like [Cucumis sativus]
gi|449513301|ref|XP_004164289.1| PREDICTED: ras-related protein RABC1-like [Cucumis sativus]
Length = 209
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/209 (64%), Positives = 167/209 (79%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
M S +DY FK+L+IGDSGVGKSS+LLS S++ D SPTIGVDFK+K +T GGK+
Sbjct: 1 MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNLS VWAKE++LYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K+LVGNKVD++S R VT++EG+ +A+E+ CLF ECSAK +V+QCF++L+ KIL+ PS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
LL +GS V+ I K+K Q A +CC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209
>gi|359806090|ref|NP_001241441.1| uncharacterized protein LOC100794330 [Glycine max]
gi|255645015|gb|ACU23007.1| unknown [Glycine max]
Length = 214
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/201 (66%), Positives = 164/201 (81%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DY FK+LLIGDSGVGKS++LLS S++ D SPTIGVDFK+K +T+GGK+LKL IWDTA
Sbjct: 13 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTIGGKKLKLAIWDTA 72
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GII+VYDVTRRETFTNLS +WAKE++LYSTNQDC+K+LVGNKV
Sbjct: 73 GQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 132
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D++SER V+++EG+ A+E+ CL+ ECSAK +V QCF +L+ KILE PSLL +GS+ V
Sbjct: 133 DKESERVVSKKEGIDFAREYGCLYTECSAKTRVNVTQCFDELVMKILETPSLLAEGSSGV 192
Query: 190 KNQILKQKEVQESARGGNCCS 210
K I KQK A CCS
Sbjct: 193 KKNIFKQKPPLSDASSSGCCS 213
>gi|116781187|gb|ABK21996.1| unknown [Picea sitchensis]
gi|116784353|gb|ABK23312.1| unknown [Picea sitchensis]
Length = 208
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 133/209 (63%), Positives = 166/209 (79%), Gaps = 1/209 (0%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
M S +D+ FK+L+IGDSGVGKSS+LL S+S D SPTIGVDFK+KL+T+ GKR
Sbjct: 1 MASSTSQGDFDHVFKLLMIGDSGVGKSSLLLRFTSDSFDDLSPTIGVDFKLKLMTIAGKR 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKLTIWDTAGQERF TLTSSYYRGA GII VYDVTRRETFTNLS VWAKEV+LYSTNQDC
Sbjct: 61 LKLTIWDTAGQERFRTLTSSYYRGAQGIIFVYDVTRRETFTNLSEVWAKEVDLYSTNQDC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K+LVGNKVDR++ER V+++EG+ LA++ CLFLECSAK +V+ CF++L+ KIL+ P+
Sbjct: 121 IKMLVGNKVDRETERVVSKKEGIALARQMGCLFLECSAKTHVNVENCFEELVLKILDTPN 180
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
LL+ + + I KQ + + A G+CC
Sbjct: 181 LLQDSATAARKNIFKQNQAND-ANSGSCC 208
>gi|449458101|ref|XP_004146786.1| PREDICTED: ras-related protein RABC1-like isoform 1 [Cucumis
sativus]
gi|449458103|ref|XP_004146787.1| PREDICTED: ras-related protein RABC1-like isoform 2 [Cucumis
sativus]
gi|449529576|ref|XP_004171774.1| PREDICTED: ras-related protein RABC1-like isoform 1 [Cucumis
sativus]
gi|449529578|ref|XP_004171775.1| PREDICTED: ras-related protein RABC1-like isoform 2 [Cucumis
sativus]
Length = 213
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/201 (66%), Positives = 164/201 (81%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DY FK+LLIGDSGVGKS++LL S+S D SPTIGVDFKIK +TVGGK+LKL IWDTA
Sbjct: 12 FDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKLAIWDTA 71
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLT SYYRGA GII+VYDVTRRETFTNLS +WAKE++LYSTNQDC+K+LVGNKV
Sbjct: 72 GQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 131
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D++SER V+++EG+ A+E+ CLFLECSAK +V+QCF +L+ KIL+ PSLL GS +
Sbjct: 132 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGSTGL 191
Query: 190 KNQILKQKEVQESARGGNCCS 210
K I K+K + + G CCS
Sbjct: 192 KKNIFKEKPPETTTSAGGCCS 212
>gi|226529379|ref|NP_001150695.1| ras-related protein Rab-18 [Zea mays]
gi|195641120|gb|ACG40028.1| ras-related protein Rab-18 [Zea mays]
Length = 212
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/206 (67%), Positives = 173/206 (83%), Gaps = 5/206 (2%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVH---DPSPTIGVDFKIKLLTVGGKRLKLT 64
+SYD SFK+LLIGDS VGKSS+L+S +S + H D +PTIGVDFKIK L+VGGK+LKLT
Sbjct: 7 SSYDCSFKVLLIGDSAVGKSSLLVSFVS-AAHIDDDIAPTIGVDFKIKFLSVGGKKLKLT 65
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+TSSYYRGAHGIILVYDVT+RE+FTNL+ VW KE+EL+STN++C+K+L
Sbjct: 66 IWDTAGQERFRTITSSYYRGAHGIILVYDVTKRESFTNLADVWTKEIELHSTNKECIKML 125
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
VGNKVD+D +R VT+EEG+ AQE CLF+E SAK E+V++CF++L KIL+VPSLLE+
Sbjct: 126 VGNKVDKDEDRMVTKEEGLEFAQERGCLFVESSAKTRENVEKCFEELALKILQVPSLLEE 185
Query: 185 GSAVVKNQILKQKEVQESA-RGGNCC 209
GS+VVK L K+ QE+A R G CC
Sbjct: 186 GSSVVKRNTLTLKQKQENANRSGGCC 211
>gi|224062966|ref|XP_002300952.1| predicted protein [Populus trichocarpa]
gi|222842678|gb|EEE80225.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/201 (67%), Positives = 167/201 (83%), Gaps = 1/201 (0%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
++Y FK+LLIGDSGVGKS++LLS S + D SPTIGVDFK+K +T+GGK+LKL IWDTA
Sbjct: 11 FEYLFKLLLIGDSGVGKSTLLLSFTSKNFEDLSPTIGVDFKVKHVTIGGKKLKLAIWDTA 70
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GII+VYDVTRRETFTNLS +WAKE++LYSTNQDC+K+LVGNKV
Sbjct: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQDCIKMLVGNKV 130
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D++SER VT++EG+ A+E+ CLFLECSAK +V+QCF++L+ KILE PSLL +GS+ V
Sbjct: 131 DKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLLAEGSSGV 190
Query: 190 KNQILKQKEVQESARGGNCCS 210
K + KQK E +CCS
Sbjct: 191 KKNVFKQKP-PEDVTTSSCCS 210
>gi|255558460|ref|XP_002520255.1| protein with unknown function [Ricinus communis]
gi|223540474|gb|EEF42041.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 133/203 (65%), Positives = 170/203 (83%), Gaps = 1/203 (0%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIW 66
+ ++Y FK+LLIGDSGVGKSS+LLS SN+ D SPTIGVDFK++ +T+GGK+LKL IW
Sbjct: 7 QSDFEYLFKLLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVQYVTIGGKKLKLAIW 66
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNLS +WAKE++LYSTNQDC+K+LVG
Sbjct: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVG 126
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
NKVD++SER V+++EG+ A+++ CLF+ECSAK +V+QCF++L+ KILE PSLL +GS
Sbjct: 127 NKVDKESERVVSKKEGIDFARQYGCLFIECSAKTRANVEQCFEELVLKILETPSLLAEGS 186
Query: 187 AVVKNQILKQKEVQESARGGNCC 209
+ VK I KQK Q+ A +CC
Sbjct: 187 SGVKKNIFKQKPPQDVAT-SSCC 208
>gi|224093425|ref|XP_002309918.1| predicted protein [Populus trichocarpa]
gi|222852821|gb|EEE90368.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 130/209 (62%), Positives = 168/209 (80%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
M S + +DY FK+L+IGDSGVGKSS+LLS S++ D SPTIGVDFK+K + +GGK+
Sbjct: 1 MDSSSSSPEFDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLSPTIGVDFKVKFVNIGGKK 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKL IWDTAGQERF TLTSSYYRGA GI++VYDVTRR+TFTNLS +WAKE++LYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIVMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K+LVGNKVD++S+R VT++EG+ A+E+ CLF+ECSAK +V+QCF++L+ K+L+ PS
Sbjct: 121 IKLLVGNKVDKESDRVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKVLDTPS 180
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
LL +GS VK I +K Q A +CC
Sbjct: 181 LLAEGSKGVKKNIFNEKRPQPDASTSSCC 209
>gi|449441211|ref|XP_004138376.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
gi|449503760|ref|XP_004162163.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
Length = 208
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 169/210 (80%), Gaps = 2/210 (0%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
MGS + + SFK+LLIGDS VGKSS+L + IS S+HD SPTIGVDFKIK LTV GKR
Sbjct: 1 MGSP--SPHLNLSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKR 58
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKLTIWDTAGQERF +LTSSYYRGA GIILVYDVTRRETF NL VWA EVELY T+QDC
Sbjct: 59 LKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDC 118
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
VK+LVGNKVDR+SER V+RE+G+ LA + LF ECSAK E+V++CF++L KI+EVPS
Sbjct: 119 VKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPS 178
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCCS 210
LE+ S++VK IL+QK+ ++ + G CCS
Sbjct: 179 FLEERSSLVKRNILRQKQEGQAQQSGGCCS 208
>gi|1370174|emb|CAA98164.1| RAB1Y [Lotus japonicus]
Length = 207
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 131/207 (63%), Positives = 166/207 (80%)
Query: 3 SKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLK 62
S +DY FK+L+IGDSGVGKSS+LLS S+ D SPTIGVDFK+K + +GGK+LK
Sbjct: 1 SSSAPQEFDYLFKLLMIGDSGVGKSSLLLSFTSDEFQDMSPTIGVDFKVKYVAIGGKKLK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNLS +WAKE++LYSTNQDC+K
Sbjct: 61 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDCIK 120
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
+LVGNKVD++S+R V+++EG+ A+E+ CLF+ECSAK +V+QCF++L+ KIL+ PSLL
Sbjct: 121 MLVGNKVDKESDRVVSKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 180
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
+GS VK I K K+ Q A +CC
Sbjct: 181 AEGSKGVKKNIFKDKQPQADASTSSCC 207
>gi|351721968|ref|NP_001235436.1| uncharacterized protein LOC100526880 [Glycine max]
gi|255631052|gb|ACU15890.1| unknown [Glycine max]
Length = 209
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 129/209 (61%), Positives = 166/209 (79%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
M S G+ +DY FK+L+IGDSGVGKSS+LLS S++ D SPTIGVD K+K + +GGK+
Sbjct: 1 MDSSSGHQEFDYLFKLLMIGDSGVGKSSLLLSFTSDAFEDLSPTIGVDIKVKYVMMGGKK 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNLS +WAKE++LYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K+L GNK+D+D +R VT++EG+ A+E+ CLF+ECSAK +V+QCF++L+ KIL+ PS
Sbjct: 121 IKMLAGNKLDKDGDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
L+ +GS VK I K + Q A +CC
Sbjct: 181 LIAEGSKGVKKNIFKDRPPQSDASASSCC 209
>gi|363808158|ref|NP_001242481.1| uncharacterized protein LOC100787603 [Glycine max]
gi|255639535|gb|ACU20062.1| unknown [Glycine max]
gi|255639578|gb|ACU20083.1| unknown [Glycine max]
Length = 209
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 130/209 (62%), Positives = 168/209 (80%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
M S + +DY FK+L+IGDSGVGKSS+LLS S++ D SPTIGVDFK+K +T+GGK+
Sbjct: 1 MDSSSEHQEFDYLFKLLMIGDSGVGKSSLLLSFTSDAFEDLSPTIGVDFKVKYVTMGGKK 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKL IWDTAGQERF TLT+SYYRGA GII+VYDVTRR TFTNLS +WAKE++LYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTNSYYRGAQGIIMVYDVTRRGTFTNLSEIWAKEIDLYSTNQDC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K+LVGNKVD++ +R VT++EG+ A+E+ CLF+ECSAK +V+QCF++L+ KIL+ PS
Sbjct: 121 IKMLVGNKVDKEGDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
L+ +GS VK I K++ Q A +CC
Sbjct: 181 LIAEGSKGVKKNIFKERPPQSDASTSSCC 209
>gi|357519975|ref|XP_003630276.1| Ras-related protein Rab-18-B [Medicago truncatula]
gi|355524298|gb|AET04752.1| Ras-related protein Rab-18-B [Medicago truncatula]
gi|388503306|gb|AFK39719.1| unknown [Medicago truncatula]
Length = 208
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 164/209 (78%), Gaps = 1/209 (0%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
M S G +DY FK+L+IGDSGVGKSS+LL S+ D SPTIGVDFK+K +T+ GK+
Sbjct: 1 MDSSSGQQEFDYMFKLLMIGDSGVGKSSLLLRFTSDDFDDLSPTIGVDFKVKYVTIEGKK 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRRETFTNLS +WAKE++LYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQDC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K+LVGNKVD++ +R VT++EG+ A+E+ CLF+ECSAK +V+QCF++L+ K+L+ PS
Sbjct: 121 MKMLVGNKVDKEGDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKVLDTPS 180
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
LL +GS VK I K K Q A CC
Sbjct: 181 LLAEGSKGVKKNIFKDKP-QSDASASGCC 208
>gi|326515390|dbj|BAK03608.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 207
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 172/211 (81%), Gaps = 7/211 (3%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGG 58
MGS G+ SYD SFK+LLIGDS VGKSS+L+S +S + D SPTIGVDFKIK LTVG
Sbjct: 1 MGSTPGS-SYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGD 59
Query: 59 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQ 118
K+LKLTIWDTAGQERF T+TSSYYRGAHGIILVYDVT+R++FTNL+ VWAKE+EL+STN+
Sbjct: 60 KKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNK 119
Query: 119 DCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV 178
+CVK+LVGNK+D+D +R VT EEG+ AQ+ CLFLE SAK E+V++CF++L+ KILEV
Sbjct: 120 ECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESSAKTRENVEKCFEELVLKILEV 179
Query: 179 PSLLEQGSAVVKNQILKQKEVQESARGGNCC 209
PSL E+GS+VVK LKQK + G CC
Sbjct: 180 PSLSEEGSSVVKRNSLKQKH----EKSGGCC 206
>gi|242034275|ref|XP_002464532.1| hypothetical protein SORBIDRAFT_01g020220 [Sorghum bicolor]
gi|241918386|gb|EER91530.1| hypothetical protein SORBIDRAFT_01g020220 [Sorghum bicolor]
Length = 217
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/203 (68%), Positives = 166/203 (81%), Gaps = 3/203 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLI--SNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWD 67
++ SFKILLIGDSGVGKSS+L+S + SN D +PTIGVDFKIK LTVGGK+LKLTIWD
Sbjct: 14 HECSFKILLIGDSGVGKSSLLVSFVAASNLDADIAPTIGVDFKIKFLTVGGKKLKLTIWD 73
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+TSSYYRGA GIILVYDVT+RE+F+NLS VW KE+E STN+DC+K+LVGN
Sbjct: 74 TAGQERFRTITSSYYRGAQGIILVYDVTKRESFSNLSDVWTKEIEANSTNKDCIKMLVGN 133
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG-S 186
KVD+D ER VT+EEG+ A+E CLFLE SAK E+V+QCF++L KILEVPSLLE+G S
Sbjct: 134 KVDKDDERMVTKEEGLAFAEESGCLFLESSAKTRENVEQCFEELALKILEVPSLLEEGSS 193
Query: 187 AVVKNQILKQKEVQESARGGNCC 209
+VVK ILKQK+ + CC
Sbjct: 194 SVVKRNILKQKQESHAKNSSGCC 216
>gi|357146466|ref|XP_003574002.1| PREDICTED: ras-related protein RABC2a-like [Brachypodium
distachyon]
Length = 217
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/211 (64%), Positives = 170/211 (80%), Gaps = 3/211 (1%)
Query: 2 GSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSV--HDPSPTIGVDFKIKLLTVGGK 59
G+ G+++Y+ SFKILLIGDSGVGKSS+L+S ++ + D +PTIGVDFKIK LTVGGK
Sbjct: 6 GTAGGSSAYECSFKILLIGDSGVGKSSLLVSFVAAATLDDDITPTIGVDFKIKFLTVGGK 65
Query: 60 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQD 119
+LKLTIWDTAGQERF T+T SYYRGA GIILVYDV +RE+FTNL+ VW KE++ S+N+D
Sbjct: 66 KLKLTIWDTAGQERFRTITGSYYRGAQGIILVYDVAKRESFTNLADVWTKEIDSNSSNKD 125
Query: 120 CVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVP 179
C+K+LVGNKVD+D ER VTREEG+ A+E CLFLE SAK E+V+ CF+ L KILEVP
Sbjct: 126 CIKMLVGNKVDKDDERTVTREEGLAFAEESGCLFLESSAKTRENVENCFEQLTLKILEVP 185
Query: 180 SLLEQG-SAVVKNQILKQKEVQESARGGNCC 209
SLLE+G S+VVK ILKQ++ + GG CC
Sbjct: 186 SLLEEGCSSVVKRNILKQQQESHAKYGGRCC 216
>gi|226502426|ref|NP_001150036.1| ras-related protein Rab-18 [Zea mays]
gi|226958554|ref|NP_001152900.1| uncharacterized protein LOC100272640 [Zea mays]
gi|194700036|gb|ACF84102.1| unknown [Zea mays]
gi|195636232|gb|ACG37584.1| ras-related protein Rab-18 [Zea mays]
gi|413934110|gb|AFW68661.1| Ras protein Rab-18 [Zea mays]
Length = 215
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 168/203 (82%), Gaps = 3/203 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSV--HDPSPTIGVDFKIKLLTVGGKRLKLTIWD 67
++ SFK LLIGDSGVGKSS+L+S ++ S D +PTIGVDFKIK LTVGGK+LKLTIWD
Sbjct: 12 HECSFKFLLIGDSGVGKSSLLVSFVAASYLDGDIAPTIGVDFKIKFLTVGGKKLKLTIWD 71
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+TSSYYRGA GIILVYDVT+RE+F+NL+ VW KE+E STN+DC+K+LVGN
Sbjct: 72 TAGQERFRTITSSYYRGAQGIILVYDVTKRESFSNLADVWTKEIEANSTNKDCIKMLVGN 131
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG-S 186
KVD+D ER VT+EEG+ A+E+ CLFLE SAK E+V++CF++L KILEVPSLLE+G S
Sbjct: 132 KVDKDDERMVTKEEGLAFAEEYGCLFLESSAKTRENVEKCFEELALKILEVPSLLEEGSS 191
Query: 187 AVVKNQILKQKEVQESARGGNCC 209
+VVK ILKQK+ ++ G CC
Sbjct: 192 SVVKRNILKQKQESDAKNGSGCC 214
>gi|195628816|gb|ACG36230.1| ras-related protein Rab-18 [Zea mays]
Length = 215
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/204 (67%), Positives = 168/204 (82%), Gaps = 5/204 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVH---DPSPTIGVDFKIKLLTVGGKRLKLTIW 66
++ SFKILLIGDSGVGKSS+L+S ++ S H D +PTIGVDFKIK LTVGGK+LKLTIW
Sbjct: 12 HECSFKILLIGDSGVGKSSLLVSFVAAS-HLDGDIAPTIGVDFKIKFLTVGGKKLKLTIW 70
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+TSSYYRGA GIILVYDVT+RE+F+NL+ VW KE+E STN+DC+K+LVG
Sbjct: 71 DTAGQERFRTITSSYYRGAQGIILVYDVTKRESFSNLADVWTKEIEANSTNKDCIKMLVG 130
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG- 185
NKVD+D ER VT EEG+ A+E CLFLE SAK E+V++CF++L KILEVPSLLE+G
Sbjct: 131 NKVDKDDERMVTEEEGLAFAEESGCLFLESSAKTRENVEKCFEELALKILEVPSLLEEGS 190
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
S+VVK +ILKQK+ + G CC
Sbjct: 191 SSVVKRKILKQKQESHAKNGSGCC 214
>gi|226506700|ref|NP_001152280.1| ras-related protein Rab-18 [Zea mays]
gi|195654619|gb|ACG46777.1| ras-related protein Rab-18 [Zea mays]
gi|414871235|tpg|DAA49792.1| TPA: ras protein Rab-18 [Zea mays]
Length = 215
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 138/204 (67%), Positives = 167/204 (81%), Gaps = 5/204 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVH---DPSPTIGVDFKIKLLTVGGKRLKLTIW 66
++ SFKILLIGDSGVGKSS+L+S ++ S H D +PTIGVDFKIK LTVGGK+LKLTIW
Sbjct: 12 HECSFKILLIGDSGVGKSSLLVSFVAAS-HLDGDIAPTIGVDFKIKFLTVGGKKLKLTIW 70
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+TSSYYRGA GIILVYDVT+RE+F+NL+ VW KE+E STN+DC+K+LVG
Sbjct: 71 DTAGQERFRTITSSYYRGAQGIILVYDVTKRESFSNLADVWTKEIEANSTNKDCIKMLVG 130
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG- 185
NKVD+D ER VT EEG+ A+E CLFLE SAK E+V++CF++L KILEVPSLLE+G
Sbjct: 131 NKVDKDDERMVTEEEGLAFAEESGCLFLESSAKTRENVEKCFEELALKILEVPSLLEEGS 190
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
S+VVK ILKQK+ + G CC
Sbjct: 191 SSVVKRNILKQKQESHAKNGSGCC 214
>gi|218195901|gb|EEC78328.1| hypothetical protein OsI_18064 [Oryza sativa Indica Group]
Length = 213
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 130/200 (65%), Positives = 160/200 (80%), Gaps = 4/200 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DY FK+LLIGDSGVGKSS+LL S++ D SPTIGVDFK+K++ GGK+LKL IWDTA
Sbjct: 18 FDYLFKLLLIGDSGVGKSSLLLRFTSDAFEDLSPTIGVDFKVKMVNTGGKKLKLAIWDTA 77
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA VYDVTRRETFTNLS +WAKE++LYSTNQDC+K+LVGNKV
Sbjct: 78 GQERFRTLTSSYYRGAQ----VYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 133
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D++SERAVT++EG+ A+E+ CLFLECSAK +V+QCF++L+ KIL+ PSLL S+
Sbjct: 134 DKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADASSGA 193
Query: 190 KNQILKQKEVQESARGGNCC 209
K I KQK + A +CC
Sbjct: 194 KKNIFKQKPPEADAAASSCC 213
>gi|8778652|gb|AAF79660.1|AC022314_1 F9C16.3 [Arabidopsis thaliana]
Length = 233
Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 165/221 (74%), Gaps = 21/221 (9%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
MGS G +DY FK+LLIGDSGVGKSS+LLS SN+ D SPTIGVDFK+K LT+G K+
Sbjct: 1 MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60
Query: 61 LKLTIWDT---------------------AGQERFGTLTSSYYRGAHGIILVYDVTRRET 99
LKL IWDT AGQERF TLTSSYYRGA GII+VYDVTRR+T
Sbjct: 61 LKLAIWDTVSHCCLSSNVTGEEEESWICNAGQERFRTLTSSYYRGAQGIIMVYDVTRRDT 120
Query: 100 FTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAK 159
FTNLS +WAKE++LYSTNQDC+K+LVGNKVD++SERAV+++EG+ A+E+ CLFLECSAK
Sbjct: 121 FTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAK 180
Query: 160 NTEDVKQCFKDLLYKILEVPSLLEQGSAVVKNQILKQKEVQ 200
+V+QCF++L+ KILE PSL +GS+ K I KQ Q
Sbjct: 181 TRVNVEQCFEELVLKILETPSLTAEGSSGGKKNIFKQNPAQ 221
>gi|115482326|ref|NP_001064756.1| Os10g0456600 [Oryza sativa Japonica Group]
gi|31432458|gb|AAP54088.1| Ras-related protein Rab-18, putative, expressed [Oryza sativa
Japonica Group]
gi|113639365|dbj|BAF26670.1| Os10g0456600 [Oryza sativa Japonica Group]
gi|125532213|gb|EAY78778.1| hypothetical protein OsI_33880 [Oryza sativa Indica Group]
gi|125575025|gb|EAZ16309.1| hypothetical protein OsJ_31770 [Oryza sativa Japonica Group]
gi|215736815|dbj|BAG95744.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 222
Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 132/206 (64%), Positives = 170/206 (82%), Gaps = 6/206 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSV-----HDPSPTIGVDFKIKLLTVGGKRLKLT 64
++ SFKILLIGDSGVGKSS+L+S + + D +PTIGVDFKIK LT+GGK+LKLT
Sbjct: 16 HECSFKILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFKIKFLTIGGKKLKLT 75
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+TSSYYRGA GIILVYDVT+RE+FTNL+ VW+KE+E +S+N+DC+K+L
Sbjct: 76 IWDTAGQERFRTITSSYYRGAQGIILVYDVTKRESFTNLAEVWSKEIESHSSNKDCIKML 135
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
VGNK+D++ ER VTREEG+ A+E CLFLE SAK ++V++CF++L KI++VPSLLE+
Sbjct: 136 VGNKIDKEDERTVTREEGLAFAEESGCLFLESSAKTRDNVEKCFEELALKIMDVPSLLEE 195
Query: 185 G-SAVVKNQILKQKEVQESARGGNCC 209
G S+VVK ILKQK+ ++ GG CC
Sbjct: 196 GSSSVVKRNILKQKQESQAKHGGGCC 221
>gi|302782571|ref|XP_002973059.1| rab family GTPase [Selaginella moellendorffii]
gi|302805556|ref|XP_002984529.1| rab family GTPase [Selaginella moellendorffii]
gi|300147917|gb|EFJ14579.1| rab family GTPase [Selaginella moellendorffii]
gi|300159660|gb|EFJ26280.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 133/201 (66%), Positives = 161/201 (80%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWD 67
N +D+ FKILLIGDSGVGKSS+LL +++ D SPTIGVDFK+KL+T+ GKRLKLTIWD
Sbjct: 13 NEFDHLFKILLIGDSGVGKSSLLLRFTADTFDDLSPTIGVDFKLKLMTLEGKRLKLTIWD 72
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF TLTSSYYRGA G+ILVYDVTRR+TFTNL VW KEVELYSTNQDCVK+LVGN
Sbjct: 73 TAGQERFRTLTSSYYRGAQGVILVYDVTRRDTFTNLQDVWLKEVELYSTNQDCVKLLVGN 132
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
KVDRDSERAV++ EG+ A+++ CLFLE SAK +V+QCF++L+ KILE PSL+ + +
Sbjct: 133 KVDRDSERAVSQHEGIAFARKYGCLFLESSAKTRINVQQCFEELVRKILETPSLVAEAKS 192
Query: 188 VVKNQILKQKEVQESARGGNC 208
V KN + E G+C
Sbjct: 193 VKKNILRPGNEPPPPENAGSC 213
>gi|357464685|ref|XP_003602624.1| GTP-binding protein yptV3 [Medicago truncatula]
gi|355491672|gb|AES72875.1| GTP-binding protein yptV3 [Medicago truncatula]
gi|388519551|gb|AFK47837.1| unknown [Medicago truncatula]
Length = 207
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 127/199 (63%), Positives = 160/199 (80%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DY FK+L+IGDSGVGKSS+LL S+S + SPTIGVDFK+K T+ GK+LKL IWDTA
Sbjct: 9 FDYVFKLLMIGDSGVGKSSLLLCFTSDSFENLSPTIGVDFKVKYFTIDGKKLKLAIWDTA 68
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GII+ YDVTRR+TFTNLS VWAKEV+LYSTNQDC+K+LVGNKV
Sbjct: 69 GQERFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQDCIKMLVGNKV 128
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D++S+R VT++EG+ A+E+ CLF+ECSAK +V+ CF++L+ KIL+ PSLL +GS
Sbjct: 129 DKESDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQHCFEELVLKILDTPSLLAEGSKGN 188
Query: 190 KNQILKQKEVQESARGGNC 208
K I K K +++ G C
Sbjct: 189 KKNIFKDKPQSDASTSGCC 207
>gi|15232785|ref|NP_187602.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|334185198|ref|NP_001189850.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|334185200|ref|NP_001189851.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|75204354|sp|Q9SF92.1|RAC2B_ARATH RecName: Full=Ras-related protein RABC2b; Short=AtRABC2b; AltName:
Full=Ras-related protein Rab18C; Short=AtRab18C
gi|6681328|gb|AAF23245.1|AC015985_3 putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|45773784|gb|AAS76696.1| At3g09910 [Arabidopsis thaliana]
gi|46359845|gb|AAS88786.1| At3g09910 [Arabidopsis thaliana]
gi|332641308|gb|AEE74829.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|332641309|gb|AEE74830.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|332641310|gb|AEE74831.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
Length = 205
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 169/210 (80%), Gaps = 6/210 (2%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
MGS G + YD SFKILLIGDSGVGKSS+LLS IS+SV D +PTIGVDFKIK + V GKR
Sbjct: 1 MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKR 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL+ +WAKE+ELYSTN DC
Sbjct: 61 LKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K+LVGNKVDR+SER V+REEGM LA++ CLF ECSA+ E+V CF++L KI+EVPS
Sbjct: 121 IKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPS 180
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCCS 210
LLE+GS+ VK ++ A G CCS
Sbjct: 181 LLEEGSSSVK------RKPDYRAHQGRCCS 204
>gi|297833756|ref|XP_002884760.1| hypothetical protein ARALYDRAFT_478315 [Arabidopsis lyrata subsp.
lyrata]
gi|297330600|gb|EFH61019.1| hypothetical protein ARALYDRAFT_478315 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 170/210 (80%), Gaps = 6/210 (2%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
MGS G + YD SFKILLIGDSGVGKSS+LLS IS+SV D +PTIGVDFKIK + V GKR
Sbjct: 1 MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKR 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL+ VWAKE+ELYSTN DC
Sbjct: 61 LKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFMNLADVWAKEIELYSTNHDC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K+LVGNKVDR+SER V++EEGM LA++ KCLF ECSA+ ++V CF++L KI+EVPS
Sbjct: 121 IKMLVGNKVDRESERKVSQEEGMALAKDLKCLFHECSARTRDNVNWCFEELALKIMEVPS 180
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCCS 210
LLE+GS+ VK ++ + G CCS
Sbjct: 181 LLEEGSSSVK------RKPDYRSHQGRCCS 204
>gi|217075322|gb|ACJ86021.1| unknown [Medicago truncatula]
Length = 207
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/199 (63%), Positives = 159/199 (79%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DY FK+L+IGDSGVGKSS+LL S+S + SPTIGVDFK+K T+ GK+LKL IWDTA
Sbjct: 9 FDYVFKLLMIGDSGVGKSSLLLCFTSDSFENLSPTIGVDFKVKYFTIDGKKLKLAIWDTA 68
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GII+ YDVTRR+TFTNLS VWAKEV+LYSTNQDC+K+LVGNKV
Sbjct: 69 GQERFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQDCIKMLVGNKV 128
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D++S+R VT++EG+ A+E+ CLF+ECSAK +V+ CF++L+ KIL+ PSLL + S
Sbjct: 129 DKESDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQHCFEELVLKILDTPSLLAESSKGN 188
Query: 190 KNQILKQKEVQESARGGNC 208
K I K K +++ G C
Sbjct: 189 KKNIFKDKPQSDASTSGCC 207
>gi|356516366|ref|XP_003526866.1| PREDICTED: ras-related protein RABC1-like [Glycine max]
Length = 207
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 129/200 (64%), Positives = 159/200 (79%), Gaps = 1/200 (0%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
++Y FK+L+IGDSGVGKSS+LL S+S D SPTIGVDFK+K LT+ GK+LKL IWDTA
Sbjct: 9 FEYLFKLLMIGDSGVGKSSLLLCFTSDSFEDLSPTIGVDFKVKYLTMEGKKLKLAIWDTA 68
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GII+ YDVTRRETFTNLS +WAKE++LYSTN +CVK+LVGNKV
Sbjct: 69 GQERFRTLTSSYYRGAQGIIMAYDVTRRETFTNLSEIWAKEIDLYSTNPECVKMLVGNKV 128
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D++S+R VT++EG+ A+E CLF ECSAK +V+QCF++L+ KIL+ PSLL +GS
Sbjct: 129 DKESDRVVTKKEGIDFARECGCLFTECSAKTRANVQQCFEELVLKILDTPSLLAEGSKGN 188
Query: 190 KNQILKQKEVQESARGGNCC 209
K I K K Q A +CC
Sbjct: 189 KKNIFKDKPSQSDAT-SSCC 207
>gi|356508969|ref|XP_003523225.1| PREDICTED: ras-related protein RABC1-like [Glycine max]
Length = 207
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/200 (63%), Positives = 160/200 (80%), Gaps = 1/200 (0%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
++Y FK+L+IGDSGVGKSS+LL S+S D SPTIGVDFK+K LT+ GK+LKL IWDTA
Sbjct: 9 FEYLFKLLMIGDSGVGKSSLLLCFTSDSFEDLSPTIGVDFKVKYLTMEGKKLKLAIWDTA 68
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GII+ YDVTRRETFTNLS +WAKE++LYSTN +C+K+LVGNKV
Sbjct: 69 GQERFRTLTSSYYRGAQGIIMAYDVTRRETFTNLSEIWAKEIDLYSTNPECIKMLVGNKV 128
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D++ +R VT++EG+ A+E CLF+ECSAK +V+QCF++L+ KIL+ PSLL +GS
Sbjct: 129 DKEGDRVVTKKEGVDFARECGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGN 188
Query: 190 KNQILKQKEVQESARGGNCC 209
K I K K Q +A +CC
Sbjct: 189 KKNIFKDKPSQTNAT-SSCC 207
>gi|116786676|gb|ABK24198.1| unknown [Picea sitchensis]
Length = 222
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 131/204 (64%), Positives = 159/204 (77%), Gaps = 7/204 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DYSFK+LL GDSGVGKSS+LL S+S D TIGVDFK KL+TVG KRLKLTIWDTA
Sbjct: 22 FDYSFKLLLAGDSGVGKSSLLLRFTSDSFDDAIATIGVDFKQKLMTVGDKRLKLTIWDTA 81
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQE+F TLT+SYYRGAHG I VYDVTRRETFTNL +VW +E +YSTNQDC+K++VGNKV
Sbjct: 82 GQEKFRTLTNSYYRGAHGFIFVYDVTRRETFTNLKNVWLEEALIYSTNQDCIKMVVGNKV 141
Query: 130 DR--DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
DR DSE V++EEG+ A++H CLF+ECSAK +V+QCF++LL KIL+ PSLLE S+
Sbjct: 142 DRAMDSESVVSKEEGIEFAKQHGCLFIECSAKTRLNVEQCFEELLLKILDTPSLLEGSSS 201
Query: 188 VVKNQILKQKEVQESARGGN--CC 209
V KN I + ++ G N CC
Sbjct: 202 VEKNNIF---DYEQPTLGANDPCC 222
>gi|147809843|emb|CAN76031.1| hypothetical protein VITISV_027716 [Vitis vinifera]
Length = 197
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/200 (63%), Positives = 157/200 (78%), Gaps = 14/200 (7%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DY FK+LLIGDSGVGKS++LLS VDFK+K + +GGK+LKL IWDTA
Sbjct: 12 FDYLFKLLLIGDSGVGKSTLLLS--------------VDFKVKHVNIGGKKLKLAIWDTA 57
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA G+I+VYDVTRRETFTNLS +WAKE++LYSTNQDC+K+LVGNKV
Sbjct: 58 GQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 117
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D++SER VT++EG+ A+E+ CLFLECSAK +V+QCF++L+ KILE PSLL +GS+ V
Sbjct: 118 DKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLLAEGSSGV 177
Query: 190 KNQILKQKEVQESARGGNCC 209
+ I KQK + A CC
Sbjct: 178 RKNIFKQKPPESDASTSGCC 197
>gi|168004225|ref|XP_001754812.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162693916|gb|EDQ80266.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 122/203 (60%), Positives = 158/203 (77%), Gaps = 5/203 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+D+ FKILLIGDSGVGKSS+L+ +++ D SPTIGVDFK+K++T+GGK+LKLTIWDTA
Sbjct: 8 FDHLFKILLIGDSGVGKSSLLVRFTADTFDDLSPTIGVDFKVKMMTLGGKKLKLTIWDTA 67
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GIILVYDV+RR TFTNLS +W KEV+ YSTN DC+K+L+GNKV
Sbjct: 68 GQERFRTLTSSYYRGAQGIILVYDVSRRATFTNLSDIWLKEVDRYSTNPDCIKMLIGNKV 127
Query: 130 D-RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D + ER VT++EG+ A++H CLFLE SAK + +V++CF +L+ KIL+ PSL +A
Sbjct: 128 DLEEHERVVTKKEGIAFARQHGCLFLEASAKTSVNVQRCFDELVQKILDTPSLTAD-TAQ 186
Query: 189 VKNQILKQKEVQE---SARGGNC 208
+K +L+ E + GG C
Sbjct: 187 LKKNVLRPGETADLPAPDAGGAC 209
>gi|168019492|ref|XP_001762278.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162686356|gb|EDQ72745.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 160/203 (78%), Gaps = 5/203 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+D+ FK+LLIGDSGVGKSS+LL +++ D SPTIGVDFK+K++T+GGKRLKLTIWDTA
Sbjct: 8 FDHLFKVLLIGDSGVGKSSLLLRFTADTFDDLSPTIGVDFKVKMMTLGGKRLKLTIWDTA 67
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GIILVYDV+RR TFT+LS +W KEV+ +ST DC+K+L+GNKV
Sbjct: 68 GQERFRTLTSSYYRGAQGIILVYDVSRRATFTDLSDIWLKEVDRFSTKPDCIKMLIGNKV 127
Query: 130 D-RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D + ER VT++EG+ A++H CLFLE SAK + +V++CF +L+ KIL+ PSL++ + +
Sbjct: 128 DLEERERVVTKKEGIAFARQHGCLFLEASAKTSINVQRCFDELVQKILDTPSLIDNVAQL 187
Query: 189 VKNQILKQKEVQE---SARGGNC 208
KN +L+ E + A GG C
Sbjct: 188 KKN-VLRPGETADLPSPAAGGAC 209
>gi|255556840|ref|XP_002519453.1| protein with unknown function [Ricinus communis]
gi|223541316|gb|EEF42867.1| protein with unknown function [Ricinus communis]
Length = 325
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/178 (68%), Positives = 150/178 (84%), Gaps = 1/178 (0%)
Query: 1 MGSKVGNNS-YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGK 59
MGS G S YD+SFKI+LIGDS VGKSS+++S IS +V + TIG+D K+K +TVGGK
Sbjct: 101 MGSPSGKGSDYDHSFKIVLIGDSNVGKSSLIVSFISGAVTELPNTIGMDIKMKQITVGGK 160
Query: 60 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQD 119
RLKLTIWDTAGQERF TLTSSYYR AHGIILVYDVT++++FTNL ++W KEVELYSTN+D
Sbjct: 161 RLKLTIWDTAGQERFRTLTSSYYRDAHGIILVYDVTQKQSFTNLENLWTKEVELYSTNKD 220
Query: 120 CVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
C+K+LVGNKVDR+SERAV+REEGM LA++ LFLE SAK E+V++CF DL K+L+
Sbjct: 221 CIKMLVGNKVDRESERAVSREEGMDLAKQQGFLFLESSAKTRENVEKCFDDLALKMLQ 278
>gi|388521533|gb|AFK48828.1| unknown [Medicago truncatula]
Length = 158
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 117/158 (74%), Positives = 138/158 (87%)
Query: 53 LLTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVE 112
+LTVGGKRLKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNLS VW+KE+E
Sbjct: 1 MLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELE 60
Query: 113 LYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLL 172
LYSTNQ+CVK+LVGNKVD+DSERAV+REEG+ LA+E CL LECSAK E+V++CF++L
Sbjct: 61 LYSTNQECVKMLVGNKVDKDSERAVSREEGLSLAKELGCLLLECSAKTRENVEKCFEELA 120
Query: 173 YKILEVPSLLEQGSAVVKNQILKQKEVQESARGGNCCS 210
KI+E PSLLE+GSA K +LKQK+ +S++ G CCS
Sbjct: 121 LKIMEAPSLLEEGSAATKRNVLKQKQEPQSSQNGGCCS 158
>gi|168006773|ref|XP_001756083.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692593|gb|EDQ78949.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 161/205 (78%), Gaps = 5/205 (2%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWD 67
N +D+ FKILL+G+SGVGKSS+LL ++ D SPTIGVDFK+K++++ GKRLKLTIWD
Sbjct: 6 NDFDHLFKILLVGNSGVGKSSLLLRFTASKFDDLSPTIGVDFKVKMVSLQGKRLKLTIWD 65
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF TLTS+YYRGA GIILVYDVTRR TFT+LS VW KEV+ +STN+DC+K+L+GN
Sbjct: 66 TAGQERFRTLTSTYYRGAQGIILVYDVTRRATFTDLSDVWLKEVDRFSTNKDCIKMLIGN 125
Query: 128 KVD-RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
KVD +SER V ++EG+ A++H CLFLE SAK + +V++CF +L++KIL+ PSL +
Sbjct: 126 KVDLEESERVVAKKEGIAFARQHGCLFLEASAKTSINVQRCFDELVHKILDTPSLTAD-T 184
Query: 187 AVVKNQILKQKEVQES---ARGGNC 208
A ++ +L+ ++ + A GG C
Sbjct: 185 AQLETNLLRSDQMWDQGYLALGGVC 209
>gi|168025036|ref|XP_001765041.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162683850|gb|EDQ70257.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 208
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 117/187 (62%), Positives = 148/187 (79%), Gaps = 1/187 (0%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+D+ FK+LLIGDSGVGKSS+LL ++ D SPTIGVDFK++++ +G KRLKLTIWDTA
Sbjct: 8 FDHLFKVLLIGDSGVGKSSLLLRFTADKFDDLSPTIGVDFKVEMMILGTKRLKLTIWDTA 67
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGAHGIILVYDV+RR TFT+ S VW KEVE +STN+DC+K+LVGNKV
Sbjct: 68 GQERFRTLTSSYYRGAHGIILVYDVSRRTTFTDFSDVWLKEVEWFSTNKDCIKVLVGNKV 127
Query: 130 D-RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D + ER V ++EG+ A++H CLFLE SAK +V++CF +L+ KIL+ PSL + +
Sbjct: 128 DLEERERVVAKKEGVAFARQHGCLFLEASAKTCVNVQRCFDELVQKILDTPSLHANTAQL 187
Query: 189 VKNQILK 195
KN I K
Sbjct: 188 RKNVIYK 194
>gi|168018849|ref|XP_001761958.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162687013|gb|EDQ73399.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 213
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 120/208 (57%), Positives = 155/208 (74%), Gaps = 4/208 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLT 64
+G+ +D FKILLIG+SGVGKSS+LL + D SPTIGVDFK+K+L + GKRLKLT
Sbjct: 4 LGDVDFDNLFKILLIGNSGVGKSSLLLRFTAGKFDDLSPTIGVDFKVKMLNLQGKRLKLT 63
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF TLTSSYYRGA GIILVYDVTRR TFT+LS VW KEV+ YSTN+DC+ +L
Sbjct: 64 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRATFTDLSDVWLKEVDRYSTNKDCIMML 123
Query: 125 VGNKVD-RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
VG+KVD +S R VT++EG+ A++H CLFLE SAK + +V++CF +L++KI++ PSL
Sbjct: 124 VGSKVDLEESGRVVTKKEGIAFARQHGCLFLEASAKTSINVQRCFDELVHKIIDTPSLTA 183
Query: 184 QGSAVVKNQILKQKEVQE---SARGGNC 208
+ +L+ + + S GG C
Sbjct: 184 DTGKLKPTNLLRPDKASDQGTSTPGGIC 211
>gi|303276288|ref|XP_003057438.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461790|gb|EEH59083.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 218
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 152/205 (74%), Gaps = 11/205 (5%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+D+ K+LL+GDSGVGKSS+L+ + D SPTIGVDFK+K L GKRLKLT+WDTA
Sbjct: 19 HDHVIKLLLVGDSGVGKSSLLVRFTDDVFEDQSPTIGVDFKLKYLNARGKRLKLTVWDTA 78
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA GI+ VYD+T+RE+F N+S +WAKEV+LY+T +DCVKI++GNK+
Sbjct: 79 GQERFRTLTSSYYRGAQGIVFVYDITKRESFENVSEIWAKEVDLYATVEDCVKIVIGNKI 138
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ----- 184
D++ R V+R+EG A+++ CLFLE SAK+ +VK+ F +L+ ++L+ PSLL +
Sbjct: 139 DKEKAREVSRKEGEAFAEDNGCLFLETSAKSRRNVKEAFDELVSRVLDTPSLLTEHDPGG 198
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G V N+++ +SAR G C
Sbjct: 199 GGRVRLNRLV------DSARSGCAC 217
>gi|413920113|gb|AFW60045.1| hypothetical protein ZEAMMB73_972006 [Zea mays]
Length = 157
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 130/157 (82%)
Query: 53 LLTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVE 112
++T+GGK+LKL IWDTAGQERF TLTSSYYRGA G+I+VYDVTRRETFTNLS +WAKE++
Sbjct: 1 MVTIGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEID 60
Query: 113 LYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLL 172
LYSTNQDC+K+LVGNKVD++SERAVT++EG+ A+E+ CLFLECSAK +V+QCF++L+
Sbjct: 61 LYSTNQDCIKMLVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELV 120
Query: 173 YKILEVPSLLEQGSAVVKNQILKQKEVQESARGGNCC 209
KIL+ PSLL S+ K I KQK + A +CC
Sbjct: 121 LKILDTPSLLADASSGAKKNIFKQKPPEADAAASSCC 157
>gi|308803965|ref|XP_003079295.1| putative GTP-binding protein RAB1Y (ISS) [Ostreococcus tauri]
gi|116057750|emb|CAL53953.1| putative GTP-binding protein RAB1Y (ISS) [Ostreococcus tauri]
Length = 204
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 133/173 (76%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
YD+ KILL+GDSGVGKSSI+ +S+S + SPT+GVDFK+K L V GKRLKLT+WDTA
Sbjct: 8 YDHLVKILLVGDSGVGKSSIVTRFVSDSFEELSPTVGVDFKLKRLDVDGKRLKLTVWDTA 67
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGAHG++ VYDVT +F L W KEV++Y T + VKI++GNK+
Sbjct: 68 GQERFRTLTSSYYRGAHGVVFVYDVTSAASFAALRETWLKEVDMYGTIESSVKIVIGNKI 127
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
D+DSERAVTREEG+ A+E+ CLFLECSAK V + F +L+ ILE P LL
Sbjct: 128 DKDSERAVTREEGVAFAKENGCLFLECSAKTKVRVAEAFDELVKGILETPGLL 180
>gi|168061333|ref|XP_001782644.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665877|gb|EDQ52547.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 152/206 (73%), Gaps = 4/206 (1%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWD 67
+ +D KI ++G+SGVGKSS+LL + + PTIGVDFK+K++ + GKRLKLTIWD
Sbjct: 6 DDFDILLKIPVVGNSGVGKSSLLLRFAAGKFDELWPTIGVDFKVKMMNLQGKRLKLTIWD 65
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF TLTS+YYRGA GIILVYDVTRR TFT+L++VW KEVE +STN+DC+K+L+GN
Sbjct: 66 TAGQERFRTLTSTYYRGAQGIILVYDVTRRATFTDLTNVWLKEVERFSTNKDCIKMLIGN 125
Query: 128 KVD-RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
KVD +SER VT++E + A++H CLFLE SAK + +V++CF +L+ KIL+ P+L S
Sbjct: 126 KVDLEESERMVTKKEAIAFAKQHGCLFLEASAKTSINVQRCFNELVLKILDTPNLTAD-S 184
Query: 187 AVVKNQILK--QKEVQESARGGNCCS 210
+K + K K + S G CS
Sbjct: 185 VQLKPNLFKPNPKWDRGSLTPGGVCS 210
>gi|384250747|gb|EIE24226.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 200
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 135/177 (76%), Gaps = 1/177 (0%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTI 65
N +DY K+LL+GDS VGKSS+LL +++ D +PTIGVDF++K LTV KRLKLTI
Sbjct: 2 NEPFDYLLKVLLVGDSNVGKSSLLLRFTADTFEDSVAPTIGVDFRLKFLTVNAKRLKLTI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF TLTSSYYRGA GI+ YDVTRRETF ++ +W +EV++YST + VK++V
Sbjct: 62 WDTAGQERFRTLTSSYYRGAQGIVFAYDVTRRETFESIEDIWMREVDMYSTVDNAVKMIV 121
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
NKVD+++ER V+R EG A++H CLF+E SAK V Q F++L+ KIL+ PSLL
Sbjct: 122 ANKVDKEAEREVSRAEGAAFARKHGCLFVETSAKANMAVGQAFEELVMKILDTPSLL 178
>gi|145346519|ref|XP_001417734.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577962|gb|ABO96027.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 131/175 (74%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWD 67
+YD+ KILL+GDSGVGKSS+L IS+S + PT+GVDFK+K + V G RLKLT+WD
Sbjct: 7 RAYDHLVKILLVGDSGVGKSSLLARFISDSFDEQGPTVGVDFKLKHVDVDGTRLKLTVWD 66
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF TLTSSYYRGAHG++ VYDVT RE+F N W KEVE+Y T + VKI++GN
Sbjct: 67 TAGQERFRTLTSSYYRGAHGVVFVYDVTSRESFENARETWRKEVEMYGTIANSVKIVIGN 126
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
K+DR+ ER V R+EG+ A+E+ CLFLECSAK V + F +L+ IL+ P LL
Sbjct: 127 KIDREDERTVARKEGVAFAKEYGCLFLECSAKTKVRVAEAFDELVKGILDAPGLL 181
>gi|255076861|ref|XP_002502096.1| predicted protein [Micromonas sp. RCC299]
gi|226517361|gb|ACO63354.1| predicted protein [Micromonas sp. RCC299]
Length = 210
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 140/182 (76%), Gaps = 4/182 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIW 66
+ +D++ K+LL+GDSGVGKSS+LL +++ + SPTIGVDFK+K + + GKRLKLT+W
Sbjct: 9 TSHFDHTIKLLLVGDSGVGKSSLLLRFCNDTFEELSPTIGVDFKLKYMDMAGKRLKLTVW 68
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF TLTS+YYRGA GI+ VYD+TRR+TF L+ VW+KEVE+YST +CVKI++G
Sbjct: 69 DTAGQERFRTLTSAYYRGAQGIVYVYDITRRDTFEALAEVWSKEVEMYSTVDECVKIVIG 128
Query: 127 NKVDR----DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
NKVD+ E VTREEG A+E LFLECSAK V++ F++L+ ++E PSL+
Sbjct: 129 NKVDKAKGGREEGWVTREEGETFARESGSLFLECSAKTKVSVREAFEELVKGVMETPSLM 188
Query: 183 EQ 184
E+
Sbjct: 189 EE 190
>gi|326529385|dbj|BAK01086.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 155
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 104/154 (67%), Positives = 126/154 (81%), Gaps = 1/154 (0%)
Query: 57 GGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYST 116
GGK+LKLTIWDTAGQERF T+TSSYYRGA GIILVYDV +RE+FTNL VW KE++ S+
Sbjct: 1 GGKKLKLTIWDTAGQERFRTITSSYYRGAQGIILVYDVAKRESFTNLGDVWTKEIDSNSS 60
Query: 117 NQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL 176
N+DC+K+LVGNKVD+D ER VTREEG+ AQE CLFLE SAK E+V+ CF++L+ KIL
Sbjct: 61 NKDCIKMLVGNKVDKDDERTVTREEGLAFAQESGCLFLESSAKTRENVENCFEELVLKIL 120
Query: 177 EVPSLLEQG-SAVVKNQILKQKEVQESARGGNCC 209
EVPSLLE+G S+VVK ILKQ++ + GG CC
Sbjct: 121 EVPSLLEEGSSSVVKRNILKQQQESHAKYGGRCC 154
>gi|307111814|gb|EFN60048.1| hypothetical protein CHLNCDRAFT_133281 [Chlorella variabilis]
Length = 202
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/199 (53%), Positives = 142/199 (71%), Gaps = 7/199 (3%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
D++FKILL+GDSGVGKSS+LL + + PTIGVDFK K++ +GGKR++LT+WDTAG
Sbjct: 11 DHTFKILLVGDSGVGKSSLLLRFATGGFEELVPTIGVDFKAKIIELGGKRIRLTVWDTAG 70
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLTSSYYRGA GIILVYDV+R ETF +L+ +W +EV++Y T ++ VK++V NK D
Sbjct: 71 QERFRTLTSSYYRGAQGIILVYDVSRAETFDSLADIWLREVDMYGTVEESVKMVVANKTD 130
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
R V+ + G+ A+ H CLF+E SAK V+Q F++L++KILE PSLL +
Sbjct: 131 LAETREVSTDMGVAFARAHGCLFVETSAKGNVAVEQAFEELVHKILETPSLLASSGSTFG 190
Query: 191 NQILKQKEVQESARGGNCC 209
LK K+ Q S +CC
Sbjct: 191 ---LKTKQPQSS----SCC 202
>gi|302855274|ref|XP_002959134.1| RabC/Rab18 [Volvox carteri f. nagariensis]
gi|549810|sp|P36862.1|YPTV3_VOLCA RecName: Full=GTP-binding protein yptV3
gi|409164|gb|AAA34252.1| GTP-binding protein [Volvox carteri]
gi|300255496|gb|EFJ39798.1| RabC/Rab18 [Volvox carteri f. nagariensis]
Length = 203
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 130/177 (73%), Gaps = 1/177 (0%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIW 66
+S+DY+FK+LL+GDSGVGKS IL S + + TIGVDFK+K LT GKR KLTIW
Sbjct: 4 DSHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIW 63
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF TLTSSYYRGA GII VYDVTRR+TF +L + W +E ++YST + +K++V
Sbjct: 64 DTAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVA 123
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
NKVD ++R V+ EEG A+ H CLF+E SA+ V Q F++LL KIL+ P LLE
Sbjct: 124 NKVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLE 180
>gi|159478503|ref|XP_001697342.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158274500|gb|EDP00282.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 202
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/177 (57%), Positives = 127/177 (71%), Gaps = 1/177 (0%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHD-PSPTIGVDFKIKLLTVGGKRLKLTIW 66
+++DY+FK+LL+GDSGVGKS IL S S + + TIGVDFK+K L GKR KLT+W
Sbjct: 3 DTHDYTFKVLLVGDSGVGKSCILTRFTSGSFEENTTSTIGVDFKVKYLEAEGKRCKLTVW 62
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF TLTSSYYRGA GII VYDVTRRETF L W +E ++YST + ++++V
Sbjct: 63 DTAGQERFRTLTSSYYRGAQGIIFVYDVTRRETFEALEGAWMREWDMYSTVEGAIQMVVA 122
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
NK D DS R V +EG A+ H CLF+E SAK V Q F++LL KIL+ P+LLE
Sbjct: 123 NKTDLDSARQVATQEGHDFARRHGCLFVETSAKGNVAVGQAFEELLAKILDTPALLE 179
>gi|223973143|gb|ACN30759.1| unknown [Zea mays]
gi|413920115|gb|AFW60047.1| hypothetical protein ZEAMMB73_972006 [Zea mays]
Length = 173
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/122 (76%), Positives = 111/122 (90%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DY FK+LLIGDSGVGKSS+LL ++S D SPTIGVDFK+K++T+GGK+LKL IWDTA
Sbjct: 16 FDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVTIGGKKLKLAIWDTA 75
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA G+I+VYDVTRRETFTNLS +WAKE++LYSTNQDC+K+LVGNKV
Sbjct: 76 GQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 135
Query: 130 DR 131
D+
Sbjct: 136 DK 137
>gi|422295322|gb|EKU22621.1| rab18 -family small gtpase, partial [Nannochloropsis gaditana
CCMP526]
Length = 244
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 111/203 (54%), Positives = 141/203 (69%), Gaps = 7/203 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHD-PSPTIGVDFKIKLLTVGGKRLKLTIWDT 68
YD+ FK+LLIGD+GVGKSSILL ++ D TIGVDFK+K++ V KR+K+TIWDT
Sbjct: 46 YDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVDHKRIKMTIWDT 105
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYST--NQDCVKILVG 126
AGQERF TLTSSYYRGA GIILVYDV RRE+F NL+ W +EVE+YST ++ VK+LVG
Sbjct: 106 AGQERFRTLTSSYYRGAQGIILVYDVNRRESFENLNH-WLQEVEVYSTGGGREIVKVLVG 164
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
NKVD+ ER V REE A+ LFLE SAK ++Q F +++ KIL+ PSLL +
Sbjct: 165 NKVDK--ERMVPREEAEAWARSKGMLFLEASAKTRTGIRQVFLEVVQKILDNPSLL-TNT 221
Query: 187 AVVKNQILKQKEVQESARGGNCC 209
A + ++ Q + GG CC
Sbjct: 222 APGRPRVNLQADAAAKGSGGYCC 244
>gi|356514705|ref|XP_003526044.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABC1-like
[Glycine max]
Length = 137
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/137 (68%), Positives = 116/137 (84%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
M S G+ +DY FK+L+IGDSGVGKSS+LLS S++ D SPTIGVDFK+K +T+GGK+
Sbjct: 1 MDSSXGHQEFDYLFKLLMIGDSGVGKSSLLLSFTSDAFEDLSPTIGVDFKVKYVTMGGKK 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNL +WAKE++LYSTNQD
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLFEIWAKEIDLYSTNQDY 120
Query: 121 VKILVGNKVDRDSERAV 137
+K+LVGNK+D+ S ++
Sbjct: 121 IKMLVGNKLDKVSGTSI 137
>gi|428165742|gb|EKX34731.1| hypothetical protein GUITHDRAFT_175416 [Guillardia theta CCMP2712]
Length = 201
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 106/205 (51%), Positives = 140/205 (68%), Gaps = 10/205 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSP-TIGVDFKIKLLTVGGKRLKLTI 65
++++D+ FK+LL GDSGVGKSSILL +S P TIGVDFK+K + V GK++KLTI
Sbjct: 5 SDAFDHRFKLLLTGDSGVGKSSILLRFTDDSFATDQPATIGVDFKVKSIDVEGKKVKLTI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF TLTSSYYRGA G+ILVYDVTR+ETF NL W KEV++Y+ VK+LV
Sbjct: 65 WDTAGQERFRTLTSSYYRGAQGVILVYDVTRKETFENLEQ-WLKEVDMYTNRDGVVKLLV 123
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK+D+ + R VTR +G+ A+ LF+ECSAK ++Q F++L+ KIL+ P L
Sbjct: 124 GNKIDK-ANREVTRADGIEFARNRGMLFIECSAKAKTGIQQAFEELVQKILDSPHL---- 178
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
V N++ +G + CS
Sbjct: 179 ---VNNEVSGLNLASRGTQGASNCS 200
>gi|440797100|gb|ELR18195.1| rasrelated protein Rab-18-like, putative [Acanthamoeba castellanii
str. Neff]
Length = 209
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 100/184 (54%), Positives = 132/184 (71%), Gaps = 3/184 (1%)
Query: 2 GSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSP-TIGVDFKIKLLTVGGKR 60
G+ + +D+ FK+L+IGDS VGKSSILL + D P TIGVDFK+K + +G KR
Sbjct: 3 GTTGSASHFDHLFKLLIIGDSSVGKSSILLRFTEDEFDDEHPVTIGVDFKVKTIQLGAKR 62
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
+ LTIWDTAGQE+F +LTSSYYRG GIILVYDV+ RE+F +L SVW E+E+Y N D
Sbjct: 63 INLTIWDTAGQEKFRSLTSSYYRGTQGIILVYDVSSRESFQHL-SVWLNEIEMYCNNSDV 121
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
VK+LV NK+D +R V+REEG+ A+ +F+ECSAK ++Q F++L+ KILE PS
Sbjct: 122 VKLLVANKIDL-GDRQVSREEGLAFAKSKAMVFIECSAKTKLGIQQAFEELVTKILETPS 180
Query: 181 LLEQ 184
L E+
Sbjct: 181 LYEK 184
>gi|301100814|ref|XP_002899496.1| Rab18 family GTPase, putative [Phytophthora infestans T30-4]
gi|262103804|gb|EEY61856.1| Rab18 family GTPase, putative [Phytophthora infestans T30-4]
Length = 202
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/205 (51%), Positives = 142/205 (69%), Gaps = 7/205 (3%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIW 66
+ YD+ FK+LLIGD+GVGKSS+LL ++ D TIGVDFK+K++ V GK++K+TIW
Sbjct: 2 DGYDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIW 61
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYST--NQDCVKIL 124
DTAGQERF TLTSSYYRGA GI+LVYDV RR+TF NL +W +EVE+YS +D VK+L
Sbjct: 62 DTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENL-DLWLQEVEVYSPAGGRDVVKLL 120
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
VGNK+D+ ER V+R E A+ LF+E SAK ++Q F +++ KILE P+LL
Sbjct: 121 VGNKIDK--ERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSN 178
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
+ + + L K ++S G CC
Sbjct: 179 TAPRSRGRKLDAK-AEKSGGGNGCC 202
>gi|348677906|gb|EGZ17723.1| hypothetical protein PHYSODRAFT_314944 [Phytophthora sojae]
Length = 202
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/205 (51%), Positives = 142/205 (69%), Gaps = 7/205 (3%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIW 66
+ YD+ FK+LLIGD+GVGKSS+LL ++ D TIGVDFK+K++ V GK++K+TIW
Sbjct: 2 DGYDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIW 61
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYST--NQDCVKIL 124
DTAGQERF TLTSSYYRGA GI+LVYDV RR+TF NL +W +EVE+YS +D VK+L
Sbjct: 62 DTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENL-DLWLQEVEVYSPAGGRDVVKLL 120
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
VGNK+D+ ER V+R E A+ LF+E SAK ++Q F +++ KILE P+LL
Sbjct: 121 VGNKIDK--ERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSN 178
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
+ + + L K ++S G CC
Sbjct: 179 TAPRSRGRKLDGK-AEKSGGGSGCC 202
>gi|412988755|emb|CCO15346.1| unknown [Bathycoccus prasinos]
Length = 225
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 132/182 (72%), Gaps = 4/182 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLIS--NSVHDPSPTIGVDFKIKL--LTVGGKRLKLTI 65
Y + K+LL+GDSGVGKSS+L I + D S TIGVDFK+K L + +KLT+
Sbjct: 14 YSHLIKVLLVGDSGVGKSSLLSRFIDPDTDLEDISTTIGVDFKLKYVKLKQTNETVKLTV 73
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF TLTSSYYRGA GI+ VYD++ +E+F ++ +VW KEV++YST D +KI+V
Sbjct: 74 WDTAGQERFRTLTSSYYRGAQGIVFVYDISSKESFESVENVWQKEVDMYSTIPDAIKIVV 133
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNKVD+++ER V +E+ + A+ + CLFLECSAK VK+ F +LL I+E PSLL+ G
Sbjct: 134 GNKVDKENERKVKKEDAIAFARRNGCLFLECSAKTRVSVKEIFDELLQAIVETPSLLKDG 193
Query: 186 SA 187
+
Sbjct: 194 PS 195
>gi|298712751|emb|CBJ33348.1| Rab18, RAB family GTPase [Ectocarpus siliculosus]
Length = 210
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 137/205 (66%), Gaps = 7/205 (3%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWD 67
YD+ FK+LL+GD+ VGKSSI+L ++ D TIGVDFK+K++ GGKR+K+TIWD
Sbjct: 8 PYDHLFKLLLVGDAAVGKSSIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWD 67
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYST--NQDCVKILV 125
TAGQERF TLTSSYYRGA GI+LVYDVTR ETF NLS W +EVE Y ++ VK+LV
Sbjct: 68 TAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSK-WLEEVETYHPGRGREVVKLLV 126
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ- 184
GNKVD+ ER VTR + A+ LFLE SAK VKQ F++++ KIL+ PSLL
Sbjct: 127 GNKVDK--ERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVVQKILDNPSLLANT 184
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
++ + + A GG CC
Sbjct: 185 APGRPRDTVDPSRPNPNQAGGGLCC 209
>gi|414586250|tpg|DAA36821.1| TPA: putative NAC domain transcription factor superfamily protein
[Zea mays]
Length = 160
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/133 (69%), Positives = 115/133 (86%), Gaps = 4/133 (3%)
Query: 53 LLTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVE 112
++++GGK+LKL IWDTAGQERF TLTSSYYRGA GII+VYDV+RRETFTNLS +WAKE++
Sbjct: 1 MVSIGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVSRRETFTNLSDIWAKEID 60
Query: 113 LYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLL 172
LYSTNQDCVK+LVGNKVD++SERAVT++EG+ A+E+ CLFLECSAK +V+QCF++L+
Sbjct: 61 LYSTNQDCVKMLVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELV 120
Query: 173 YK----ILEVPSL 181
K I VP L
Sbjct: 121 LKVCIYIFAVPYL 133
>gi|325186904|emb|CCA21448.1| Rab18 family GTPase putative [Albugo laibachii Nc14]
Length = 201
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 138/204 (67%), Gaps = 8/204 (3%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTIWD 67
SYD+ FKILLIGD+GVGKSSILL + + TIGVDFK+K++ V R+K+TIWD
Sbjct: 3 SYDHLFKILLIGDAGVGKSSILLRFTDDKFDGNLQSTIGVDFKVKMMQVDSSRIKVTIWD 62
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYST--NQDCVKILV 125
TAGQERF TLTSSYYRGA GI+LVYDV+RRETF +L + W +E+E+YS +D VK+LV
Sbjct: 63 TAGQERFRTLTSSYYRGAQGIVLVYDVSRRETFESLDT-WLREIEIYSPAGGRDVVKLLV 121
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNKVD+ ER+V+R+E A+ LFLE SAK + Q F +++ KILE PSLL
Sbjct: 122 GNKVDK-QERSVSRKEAEDWARNKGMLFLESSAKTRIGILQVFDEVVQKILENPSLLAST 180
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+ V+ Q L G CC
Sbjct: 181 APRVRGQKLSN---HTEPAGSVCC 201
>gi|320167405|gb|EFW44304.1| GTP-binding protein yptV3 [Capsaspora owczarzaki ATCC 30864]
Length = 205
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 123/174 (70%), Gaps = 2/174 (1%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSV-HDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+FK+LL+G+S GKSS+++ N D S TIGVDFK+K + + +KLTIWDTAGQ
Sbjct: 10 TFKLLLVGESNTGKSSLIMRFTDNVFDEDLSATIGVDFKVKQMFLNDTTIKLTIWDTAGQ 69
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TLTSS+YRGAHG+I VYDVTRRETF W EV+ Y+TN D VK+L+GNK+D+
Sbjct: 70 ERFRTLTSSFYRGAHGVIFVYDVTRRETFDTALDTWLTEVDTYATN-DVVKMLIGNKIDQ 128
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
ER V+R EG+ AQ H LF+ECSA+ V+Q F++L+ K+ + P+L G
Sbjct: 129 TEERQVSRAEGLAFAQRHSMLFIECSARTRVGVEQAFEELVQKMYDTPALWRTG 182
>gi|45592944|ref|NP_996661.1| RAB18A, member RAS oncogene family [Danio rerio]
gi|40807131|gb|AAH65318.1| RAB18A, member RAS oncogene family [Danio rerio]
gi|157422871|gb|AAI53661.1| RAB18A, member RAS oncogene family [Danio rerio]
Length = 205
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 140/201 (69%), Gaps = 6/201 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ + KIL+IG+SGVGKSS+LL ++ + TIGVDFK+K L V G R KL I
Sbjct: 2 NDDILTTLKILIIGESGVGKSSLLLRFTDDTFDAEIGATIGVDFKVKTLAVDGNRAKLAI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF TLT SYYRGA G+ILVYDV+RRETF L + W E+E Y T D VK+LV
Sbjct: 62 WDTAGQERFRTLTPSYYRGAQGVILVYDVSRRETFAKLDN-WLSELETYCTRNDLVKMLV 120
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK+D+D +R + REEG+ A++H LF+E SAK + V+ F++L+ KIL+ P L E
Sbjct: 121 GNKIDKD-DREIEREEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKILQTPGLWE-- 177
Query: 186 SAVVKNQILKQKEVQESARGG 206
++ K++ + E+ ES++GG
Sbjct: 178 -SMHKSRGVALSELSESSQGG 197
>gi|348531663|ref|XP_003453328.1| PREDICTED: ras-related protein Rab-18-B-like [Oreochromis
niloticus]
Length = 205
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 137/198 (69%), Gaps = 5/198 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ K+L+IG+SGVGKSS+LL ++ DP S TIGVDFK+K L + G + KL IWDTAG
Sbjct: 8 TLKLLIIGESGVGKSSLLLRFTEDTF-DPEQSATIGVDFKVKTLAIDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVT+R+TFT L + W E+E Y+T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYTTRNDIVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+D +R V R EG+ A++H LF+E SAK + V+ F++L+ KIL+ P L E + K
Sbjct: 126 KD-DREVDRNEGLKFARKHSMLFIEASAKTKDGVQCAFEELVEKILQTPGLWESENQGQK 184
Query: 191 NQILKQKEVQESARGGNC 208
++ Q+ + GG C
Sbjct: 185 VRLGDQEHARPGVCGGYC 202
>gi|410933135|ref|XP_003979947.1| PREDICTED: ras-related protein Rab-18-like isoform 2 [Takifugu
rubripes]
Length = 205
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 132/197 (67%), Gaps = 7/197 (3%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+ KIL+IG+SGVGKSS+LL ++ D + TIGVDFK+K +TV G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPDQAATIGVDFKVKTITVDGNKAKLAIWDTAGQ 67
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TLT SYYRGA G+ILVYDVTR+ETFT L + W E+E Y T D VK+LVGNK+DR
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRQETFTKLDN-WLNELETYCTRNDLVKMLVGNKIDR 126
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVKN 191
+ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L +
Sbjct: 127 EENREVERPEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKIIQTPGLWQSEKHGRGV 186
Query: 192 QILKQKEVQESARGGNC 208
Q+ E A GG C
Sbjct: 187 QL-----TDEDAGGGTC 198
>gi|213515510|ref|NP_001133260.1| Ras-related protein Rab-18 [Salmo salar]
gi|209148105|gb|ACI32921.1| Ras-related protein Rab-18 [Salmo salar]
Length = 206
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 133/198 (67%), Gaps = 4/198 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K + V G KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTIAVDGNSAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVT+R+TFT L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTKRDTFTRLEN-WLNELETYCTRNDLVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
++ R V R EG+ A++H LF+E SAK + V+ F++L+ KIL+ P L E +
Sbjct: 126 KEENRVVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWESNAQPRG 185
Query: 191 NQILKQKEVQESARGGNC 208
Q+ Q++ GG C
Sbjct: 186 VQLGDQEQRGAGGCGGYC 203
>gi|387017928|gb|AFJ51082.1| ras-related protein Rab-18-like [Crotalus adamanteus]
Length = 205
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 140/202 (69%), Gaps = 10/202 (4%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL N+ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDNT-FDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TFT L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFTKLDN-WLTELETYCTRYDIVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E S +
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESES---Q 181
Query: 191 NQILKQKEVQESARG--GNCCS 210
N+ +K +E RG G CS
Sbjct: 182 NRGVKLSNTEEGYRGACGGYCS 203
>gi|198429489|ref|XP_002131370.1| PREDICTED: similar to RAB18, member RAS oncogene family isoform 2
[Ciona intestinalis]
gi|198429491|ref|XP_002131333.1| PREDICTED: similar to RAB18, member RAS oncogene family isoform 1
[Ciona intestinalis]
Length = 200
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 137/197 (69%), Gaps = 7/197 (3%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+ KIL+IGDSGVGKSS+LL + D S TIGVDFK+K LTV G +KL IWDTAGQ
Sbjct: 8 TLKILIIGDSGVGKSSLLLRFTDDRFDPDQSATIGVDFKVKSLTVEGNTVKLAIWDTAGQ 67
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TLT SYYRGA G+I VYD TR+++F++LS+ W EVE YST + VK+LVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVIFVYDCTRKDSFSHLST-WLTEVETYSTKPNIVKMLVGNKIDK 126
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVKN 191
++ R VTREEG+ A++H LF+E SAK + V+ F++L+ KI++ P L E +
Sbjct: 127 EN-RVVTREEGLKFARKHSMLFIEASAKTRDGVECAFEELVEKIIQTPGLWENDGTSNRG 185
Query: 192 QILKQKEVQESARGGNC 208
L ++++GG C
Sbjct: 186 TKLS----MDTSQGGGC 198
>gi|294888082|ref|XP_002772341.1| Rab18 GTPase, putative [Perkinsus marinus ATCC 50983]
gi|239876460|gb|EER04157.1| Rab18 GTPase, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 128/181 (70%), Gaps = 2/181 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
+YD+ FK+L+IGDSGVGKS +LL + +D TIGVDFK+K L++ GKRLKL IWD
Sbjct: 5 NYDHLFKLLIIGDSGVGKSCLLLRFCDDEFNDKQLATIGVDFKVKYLSLMGKRLKLAIWD 64
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF TLTSSYYRGA GI+LVYDVT RE+F NL W +EV Y+T++ VK+LV N
Sbjct: 65 TAGQERFRTLTSSYYRGAQGIVLVYDVTSRESFENL-EYWLEEVRKYATSRSSVKMLVAN 123
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
KVD + VTR EG A EH LF+E SAK VK+ F+ L+ KIL+ P LL+ +
Sbjct: 124 KVDEVNGGDVTRREGEKFAIEHDMLFIESSAKLKVGVKEIFQQLVLKILDTPDLLQNTTP 183
Query: 188 V 188
+
Sbjct: 184 L 184
>gi|47228002|emb|CAF97631.1| unnamed protein product [Tetraodon nigroviridis]
Length = 205
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 138/200 (69%), Gaps = 5/200 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ K+L+IG+SGVGKSS+LL ++ + DP + TIGVDFK+K L + G R KL IWDTAG
Sbjct: 8 TLKLLIIGESGVGKSSLLLRF-TDDMFDPELAATIGVDFKVKTLAIDGNRAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVT+R+TF L + W E+E Y++ + VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTKRDTFAKLEN-WLNELETYTSRNNLVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+D +R V R EG+ A++H LF+E SAK + V+ F++L+ KIL+ P L E S +
Sbjct: 126 KD-DREVDRHEGLKFARKHSMLFIEASAKTKDGVQCAFEELVEKILQTPGLWESDSPGQR 184
Query: 191 NQILKQKEVQESARGGNCCS 210
Q+ +Q++ G CS
Sbjct: 185 LQLTEQQQQGGGRACGGYCS 204
>gi|51010979|ref|NP_001003449.1| ras-related protein Rab-18-B [Danio rerio]
gi|82183235|sp|Q6DHC1.1|RB18B_DANRE RecName: Full=Ras-related protein Rab-18-B; Flags: Precursor
gi|50370256|gb|AAH76054.1| RAB18B, member RAS oncogene family [Danio rerio]
Length = 205
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 135/198 (68%), Gaps = 5/198 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K + + G R KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVT+R+TFT L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+D+ R V R EG+ A++H LF+E SAK + V+ F++L+ KIL+ P L E
Sbjct: 126 KDN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWESSIQNHG 184
Query: 191 NQILKQKEVQESARGGNC 208
Q+ + ++ A GG C
Sbjct: 185 VQLSDNEPQRQGACGGYC 202
>gi|225711468|gb|ACO11580.1| Ras-related protein Rab-18 [Caligus rogercresseyi]
Length = 211
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 129/178 (72%), Gaps = 4/178 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
S K+L+IG+SGVGKSS+LL ++ DP S TIGVDFK+K +TV G R+KL IWDTAG
Sbjct: 9 SLKLLIIGESGVGKSSLLLRFTEDAF-DPEHSATIGVDFKVKTITVQGNRVKLAIWDTAG 67
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRG G ILVYDVT RE+F+N+ + W E++ Y+TN D VK+LVGNK D
Sbjct: 68 QERFRTLTPSYYRGGQGAILVYDVTSRESFSNVEN-WLNELDTYTTNHDIVKMLVGNKCD 126
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
+ +R V++EEG A++H+ +F+E SAK E V+ F++L+ I++ P L E ++
Sbjct: 127 LEDKRVVSKEEGQKCARKHRMMFIEASAKTREGVQLAFEELVENIIQTPELWEAANSA 184
>gi|225712132|gb|ACO11912.1| Ras-related protein Rab-18 [Lepeophtheirus salmonis]
gi|290462753|gb|ADD24424.1| Ras-related protein Rab-18-B [Lepeophtheirus salmonis]
Length = 204
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 134/197 (68%), Gaps = 2/197 (1%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
S K+L+IG+SGVGKSS+LL ++ D S TIGVDFK+K LTV G R+KL IWDTAGQ
Sbjct: 9 SLKLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTAGQ 68
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TLT SYYRG G ILVYDVT R++F+N+ + W E++ Y+TN D VK+LVGNK D
Sbjct: 69 ERFRTLTPSYYRGGQGAILVYDVTNRDSFSNVEN-WLNELDTYATNHDIVKMLVGNKCDL 127
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVKN 191
+ +RA+++EEG A++H+ +F+E SAK E V+ F++L+ I++ P L E S N
Sbjct: 128 EEKRAISKEEGQKCARKHRMMFIESSAKTREGVQLAFEELVENIIQTPELWEASSNNRIN 187
Query: 192 QILKQKEVQESARGGNC 208
+Q + G C
Sbjct: 188 VNSNNNNIQPGSCTGYC 204
>gi|432913216|ref|XP_004078963.1| PREDICTED: ras-related protein Rab-18-B-like [Oryzias latipes]
Length = 205
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 135/198 (68%), Gaps = 5/198 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ K+L+IG+SGVGKSS+LL ++ DP S TIGVDFK+K L + G + KL IWDTAG
Sbjct: 8 TLKLLIIGESGVGKSSLLLRFTEDTF-DPEQSATIGVDFKVKTLAIEGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDV+RR++FT L + W E+E Y+T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVSRRDSFTKLEN-WLNELETYTTRNDIVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+D +R V R EG+ A++H LF+E SAK + V+ F++L+ KIL+ P L E +
Sbjct: 126 KD-DREVDRNEGLKFARKHSMLFIEASAKTKDGVQCAFEELVEKILQTPGLWESEGPGHR 184
Query: 191 NQILKQKEVQESARGGNC 208
Q+ + A GG C
Sbjct: 185 VQLGSPDQAGGRACGGYC 202
>gi|401411617|ref|XP_003885256.1| Rab1-prov protein, related [Neospora caninum Liverpool]
gi|325119675|emb|CBZ55228.1| Rab1-prov protein, related [Neospora caninum Liverpool]
Length = 212
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
SYD+ K+LLIGDSGVGKSSILL + ++ TIGVDFK+K +TVG RLKL IWD
Sbjct: 10 SYDHLLKLLLIGDSGVGKSSILLRFSEDVFNEKQLSTIGVDFKVKAITVGDARLKLAIWD 69
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF TLTSSYYRGA GII+VYDV+ R++F +L S W E+ YSTN D V +LV N
Sbjct: 70 TAGQERFRTLTSSYYRGAQGIIMVYDVSNRQSFLDLQS-WLDEIYRYSTNADAVIMLVAN 128
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
K+D+ + V R EG A + LF+E SAK + V F++L+ KIL+ PSLLE S
Sbjct: 129 KIDKRTVE-VERREGEAFAYQKGMLFVETSAKTRQGVDHAFEELVQKILDTPSLLENTSP 187
Query: 188 V 188
V
Sbjct: 188 V 188
>gi|221487606|gb|EEE25838.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 212
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
SYD+ K+LLIGDSGVGKSSILL + ++ TIGVDFK+K +TVG RLKL IWD
Sbjct: 10 SYDHLLKLLLIGDSGVGKSSILLRFAEDVFNEKQLSTIGVDFKVKAMTVGDMRLKLAIWD 69
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF TLTSSYYRGA GII+VYDV+ R++F NL S W E+ YSTN D V +LV N
Sbjct: 70 TAGQERFRTLTSSYYRGAQGIIMVYDVSNRQSFLNLQS-WLDEIYRYSTNADAVLMLVAN 128
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
KVD+ + + V R EG A + LF+E SAK + V F++L+ KIL+ PSLL S
Sbjct: 129 KVDKRTVQ-VERREGEAFAFQKGMLFVETSAKTRQGVDHAFEELVQKILDTPSLLVNTSP 187
Query: 188 V 188
+
Sbjct: 188 I 188
>gi|89258427|gb|ABD65437.1| Rab18 [Suberites domuncula]
Length = 202
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 126/171 (73%), Gaps = 4/171 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
S K+L+IGDSG GKSS+LL +N DP S TIGVDFK+K L + KR KL+IWDTAG
Sbjct: 5 SLKLLIIGDSGAGKSSLLLRF-TNDTFDPDVSATIGVDFKVKTLVLDEKRTKLSIWDTAG 63
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYD + RE+F L VW E++ Y+T +D +K+LV NK+D
Sbjct: 64 QERFRTLTPSYYRGAQGVILVYDASSRESFEGL-EVWLNELDTYATKKDLIKMLVANKID 122
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL 181
+ SER V+R +G+ A+ + LF+E SAK + V++ F++L++KIL+ PSL
Sbjct: 123 KTSERQVSRSDGLQFARRNSMLFIEASAKTRDGVQEAFEELVHKILQTPSL 173
>gi|290561625|gb|ADD38212.1| Ras-related protein Rab-18-B [Lepeophtheirus salmonis]
Length = 204
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 127/172 (73%), Gaps = 2/172 (1%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
S K+L+IG+SGVGKSS+LL ++ D S TIGVDFK+K LTV G R+KL IWDTAGQ
Sbjct: 9 SLKLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTAGQ 68
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TLT SYYRG G ILVYDVT R++F+N+ + W E++ Y+TN D VK+LVGNK D
Sbjct: 69 ERFRTLTPSYYRGGQGAILVYDVTNRDSFSNVEN-WLNELDTYATNHDIVKMLVGNKCDL 127
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+ +RA+++EEG A++H+ +F+E SAK E V+ F++L+ I++ P L E
Sbjct: 128 EEKRAISKEEGQKCARKHRMMFIESSAKTREGVQLAFEELVENIIQTPELWE 179
>gi|290997916|ref|XP_002681527.1| rab family small GTPase [Naegleria gruberi]
gi|284095151|gb|EFC48783.1| rab family small GTPase [Naegleria gruberi]
Length = 197
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 131/197 (66%), Gaps = 6/197 (3%)
Query: 18 LIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDTAGQERFGT 76
L+GDS GKSSI+ + + SPTIGVDFK+K + V K++KLTI+DTAGQERF T
Sbjct: 1 LVGDSATGKSSIITQFTEDEFKEQMSPTIGVDFKVKFMNVNRKKVKLTIFDTAGQERFRT 60
Query: 77 LTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERA 136
LTSSYYR AHGIILVYDVTR ETF N+ + W KE +LYST ++CVK+L+GNK+D ER
Sbjct: 61 LTSSYYRNAHGIILVYDVTREETFNNIKN-WLKECDLYSTFEECVKLLIGNKIDLKEERK 119
Query: 137 VTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV----VKNQ 192
V+ ++ A+ + +++E SAK E+V + F++++Y+IL +LLE V N
Sbjct: 120 VSLQDAQNFAKSNNMVYIETSAKTKENVDKAFEEVVYQILNTTNLLESTEPVRNKPTDNV 179
Query: 193 ILKQKEVQESARGGNCC 209
+ E ES G CC
Sbjct: 180 NISTSEPNESEGGSGCC 196
>gi|410924888|ref|XP_003975913.1| PREDICTED: ras-related protein Rab-18-B-like [Takifugu rubripes]
Length = 205
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 138/198 (69%), Gaps = 5/198 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ K+L+IG+SGVGKSS+LL ++ DP + TIGVDFK+K L + G R KL IWDTAG
Sbjct: 8 TLKLLIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTLAIDGNRAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDV+RR+TF L + W E+E Y+T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVSRRDTFVKLEN-WLNELETYTTRMDLVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+D +R V R EG+ A++H LF+E SAK + V+ F++L+ KIL+ P L E + +
Sbjct: 126 KD-DREVDRNEGLKFARKHSMLFIEASAKTKDGVQCAFEELVEKILQTPGLWESDNTGQR 184
Query: 191 NQILKQKEVQESARGGNC 208
Q+ +Q++ A GG C
Sbjct: 185 LQLGEQQQGGGRACGGYC 202
>gi|237830465|ref|XP_002364530.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211962194|gb|EEA97389.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221507403|gb|EEE33007.1| rab5, putative [Toxoplasma gondii VEG]
Length = 212
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
SYD+ K+LLIGDSGVGKSSILL + ++ TIGVDFK+K +TVG RLKL IWD
Sbjct: 10 SYDHLLKLLLIGDSGVGKSSILLRFAEDVFNEKQLSTIGVDFKVKAMTVGDMRLKLAIWD 69
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF TLTSSYYRGA GII+VYDV+ R++F NL S W E+ YSTN D V +LV N
Sbjct: 70 TAGQERFRTLTSSYYRGAQGIIMVYDVSNRQSFLNLQS-WLDEIYRYSTNADAVLMLVSN 128
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
KVD+ + + V R EG A + LF+E SAK + V F++L+ KIL+ PSLL S
Sbjct: 129 KVDKRTVQ-VERREGEAFAFQKGMLFVETSAKTRQGVDHAFEELVQKILDTPSLLVNTSP 187
Query: 188 V 188
+
Sbjct: 188 I 188
>gi|397635930|gb|EJK72074.1| hypothetical protein THAOC_06432 [Thalassiosira oceanica]
Length = 224
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 140/216 (64%), Gaps = 16/216 (7%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWD 67
YD+ FK+L+IGD+ VGKSS+L+ ++ + TIGVDFK+K L + KR+KLT+WD
Sbjct: 10 PYDHLFKLLMIGDAAVGKSSMLIRFTDDAFDEHIQSTIGVDFKVKHLELNSKRIKLTVWD 69
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTN--QDCVKILV 125
TAGQERF TLTSSYYRGA G+++VYDVTRR++F NL W KE++LYS N + VK+LV
Sbjct: 70 TAGQERFRTLTSSYYRGAQGVVMVYDVTRRDSFDNLDH-WLKEIQLYSPNSGEGVVKLLV 128
Query: 126 GNKVDR-----DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
GNK+D + ER V R+E A+EH LFLE SAK +++ F +++YKILE P
Sbjct: 129 GNKIDLPEMGGEHERQVDRDEAEEWAREHGMLFLEASAKTKAGIQESFMEVVYKILEDPD 188
Query: 181 LL-------EQGSAVVKNQILKQKEVQESARGGNCC 209
LL + S V ++ + E GG CC
Sbjct: 189 LLLNTVPGQPKKSKVDLSKNSGYRAGVEDDEGGYCC 224
>gi|384485982|gb|EIE78162.1| hypothetical protein RO3G_02866 [Rhizopus delemar RA 99-880]
Length = 203
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 129/178 (72%), Gaps = 4/178 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSV---HDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+ K+LLIG+S VGKSS+LL ++ + S TIGVDFK+ ++ V K KLTIWDTA
Sbjct: 7 TLKLLLIGNSNVGKSSLLLRFTDDTFLPQEEVSATIGVDFKVSMMDVNDKTYKLTIWDTA 66
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA G+ILVYDV+ RETF L++ W EV Y ++ D VK++VGNKV
Sbjct: 67 GQERFRTLTSSYYRGAQGVILVYDVSNRETFDALNN-WWNEVNTYCSSPDVVKMIVGNKV 125
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
D++S R V+ EEG+ A++ + LF+ECSAK VKQ F++L+ KI+E PSL ++ +
Sbjct: 126 DKESSRVVSYEEGLNFARKLQTLFVECSAKTKVGVKQAFEELVEKIIETPSLWQKNTT 183
>gi|294931937|ref|XP_002780061.1| GTP-binding protein yptV3, putative [Perkinsus marinus ATCC 50983]
gi|239889905|gb|EER11856.1| GTP-binding protein yptV3, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/181 (55%), Positives = 126/181 (69%), Gaps = 2/181 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
+YD+ FK+L+IGDSGVGKS +LL + +D TIGVDFK+K ++ GKRLKL IWD
Sbjct: 5 NYDHLFKLLIIGDSGVGKSCLLLRFCDDEFNDKQLATIGVDFKVKYISSMGKRLKLAIWD 64
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF TLTSSYYRGA GI+LVYDV RE+F NL W +EV Y+T++ VK+LV N
Sbjct: 65 TAGQERFRTLTSSYYRGAQGIVLVYDVNSRESFENL-EYWLEEVRKYATSRSSVKMLVAN 123
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
KVD + VTR EG A EH LF+E SAK VK+ F+ L+ KIL+ P LLE +
Sbjct: 124 KVDEVNGGDVTRREGEKFAIEHDMLFIESSAKLKVGVKEIFQQLVLKILDTPDLLENTTP 183
Query: 188 V 188
+
Sbjct: 184 L 184
>gi|348565773|ref|XP_003468677.1| PREDICTED: ras-related protein Rab-18-like [Cavia porcellus]
Length = 206
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 138/198 (69%), Gaps = 8/198 (4%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E + +
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN---Q 181
Query: 191 NQILKQKEVQESARGGNC 208
N+ +K ++ES GG C
Sbjct: 182 NKGVKLSHMEESHGGGAC 199
>gi|329756970|gb|AEC04741.1| rab18 [Oryza sativa]
Length = 246
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 121/167 (72%), Gaps = 1/167 (0%)
Query: 43 PTIGVDFKIKLLTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTN 102
PT+GVD K K + GK+ K TIW+ AGQER SSY RGA +I VYDVT+RE+ N
Sbjct: 8 PTVGVDCKYKSVRCNGKKRKRTIWEPAGQERCRGGPSSYDRGADAMIAVYDVTKRESVAN 67
Query: 103 LSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTE 162
++ VWAKE+E+ +TN++C K+LVGNKVD++ ER VTREEG+ AQE CLFLE SAK E
Sbjct: 68 VADVWAKEIEVLATNKECDKMLVGNKVDKNEERMVTREEGLAFAQEAGCLFLESSAKTRE 127
Query: 163 DVKQCFKDLLYKILEVPSLLEQGSAVVKNQILKQKEVQESARGGNCC 209
+V++CF++L K +E PSLLE+GS+V K LKQK + A+ G CC
Sbjct: 128 NVEKCFEELAVKYVESPSLLEEGSSVCKRNALKQKH-ENKAKNGGCC 173
>gi|410933133|ref|XP_003979946.1| PREDICTED: ras-related protein Rab-18-like isoform 1 [Takifugu
rubripes]
Length = 204
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 133/197 (67%), Gaps = 8/197 (4%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+ KIL+IG+SGVGKSS+LL ++ D + TIGVDFK+K +TV G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPDQAATIGVDFKVKTITVDGNKAKLAIWDTAGQ 67
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TLT SYYRGA G+ILVYDVTR+ETFT L + W E+E Y T D VK+LVGNK+DR
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRQETFTKLDN-WLNELETYCTRNDLVKMLVGNKIDR 126
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVKN 191
++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L +
Sbjct: 127 EN-REVERPEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKIIQTPGLWQSEKHGRGV 185
Query: 192 QILKQKEVQESARGGNC 208
Q+ E A GG C
Sbjct: 186 QL-----TDEDAGGGTC 197
>gi|340375152|ref|XP_003386101.1| PREDICTED: ras-related protein Rab-18-B-like [Amphimedon
queenslandica]
Length = 201
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 132/180 (73%), Gaps = 3/180 (1%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
D S KIL+IGDSGVGKSS+LL ++N+ D + TIGVDFK+K + + GKR+KL IWDTA
Sbjct: 3 DVSLKILIIGDSGVGKSSLLLRFVNNTFDPDQASTIGVDFKVKTVQLAGKRVKLAIWDTA 62
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLT +YYRGA G+ILVYDV +TF L VW E++ Y+T +D VK+LVGNK+
Sbjct: 63 GQERFRTLTPAYYRGAQGVILVYDVCLPDTFEGL-EVWLNELDTYATKKDLVKMLVGNKI 121
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D+ +ER ++R +G+ A+ + LF+E SAK + V++ F++L+ KIL+ P L + ++ V
Sbjct: 122 DK-TERKISRADGLQFARRNSMLFIESSAKTRDGVQEAFEELVQKILQNPDLYTENTSTV 180
>gi|302828392|ref|XP_002945763.1| RabC/Rab18 [Volvox carteri f. nagariensis]
gi|300268578|gb|EFJ52758.1| RabC/Rab18 [Volvox carteri f. nagariensis]
Length = 212
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
D++ KILL+GDSGVGK+S+L +S + + TIGVDF +K L+V KR+KLT+WDTA
Sbjct: 13 DFTIKILLLGDSGVGKTSLLTRFAHDSFDEKVASTIGVDFAVKKLSVYDKRVKLTVWDTA 72
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQE+F TLTS++YRGA GIILVYDV+R +T +L W +E+ELY T D V+++V NKV
Sbjct: 73 GQEKFRTLTSTFYRGAKGIILVYDVSRPDTLRHLEEQWMRELELYGTEADAVRMVVANKV 132
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
D R V+ EG A+ H CLF+E SAK V F++L+ KILE PSLLE A
Sbjct: 133 DVGDARRVSWHEGSDFARRHGCLFVETSAKTNIAVANAFEELVLKILETPSLLEDAGA 190
>gi|30841008|ref|NP_851415.1| ras-related protein Rab-18 [Mus musculus]
gi|1710017|sp|P35293.2|RAB18_MOUSE RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|388325|gb|AAC37632.1| Rab18 [Mus musculus]
gi|515041|emb|CAA56583.1| rab18 [Mus musculus]
gi|26337433|dbj|BAC32402.1| unnamed protein product [Mus musculus]
gi|33604086|gb|AAH56351.1| RAB18, member RAS oncogene family [Mus musculus]
gi|74138639|dbj|BAE27140.1| unnamed protein product [Mus musculus]
gi|74150708|dbj|BAE25489.1| unnamed protein product [Mus musculus]
gi|74183892|dbj|BAE24512.1| unnamed protein product [Mus musculus]
gi|74191971|dbj|BAE32926.1| unnamed protein product [Mus musculus]
gi|74222309|dbj|BAE26955.1| unnamed protein product [Mus musculus]
gi|112292993|dbj|BAF02874.1| Rab18 [Mus musculus]
gi|148691081|gb|EDL23028.1| RAB18, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 206
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 137/198 (69%), Gaps = 8/198 (4%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E + +
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN---Q 181
Query: 191 NQILKQKEVQESARGGNC 208
N+ +K +ES GG C
Sbjct: 182 NKGVKLSHREESRGGGAC 199
>gi|354473456|ref|XP_003498951.1| PREDICTED: ras-related protein Rab-18-like [Cricetulus griseus]
gi|344249075|gb|EGW05179.1| Ras-related protein Rab-18 [Cricetulus griseus]
Length = 206
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 137/198 (69%), Gaps = 8/198 (4%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E + +
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN---Q 181
Query: 191 NQILKQKEVQESARGGNC 208
N+ +K +ES GG C
Sbjct: 182 NKGVKLSHREESHGGGAC 199
>gi|60223069|ref|NP_001012486.1| ras-related protein Rab-18 [Rattus norvegicus]
gi|81909560|sp|Q5EB77.1|RAB18_RAT RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|59808259|gb|AAH89957.1| RAB18, member RAS oncogene family [Rattus norvegicus]
Length = 206
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 137/198 (69%), Gaps = 8/198 (4%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E + +
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN---Q 181
Query: 191 NQILKQKEVQESARGGNC 208
N+ +K +ES GG C
Sbjct: 182 NKGVKLSPREESHGGGAC 199
>gi|388854821|emb|CCF51502.1| probable Ras-related protein Rab-18 [Ustilago hordei]
Length = 232
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 124/175 (70%), Gaps = 4/175 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP---SPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+ KILLIG S VGKSS+LL + P + TIGVD++IK + VGGKR KL+IWDTA
Sbjct: 8 TLKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTA 67
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA G+I+ YDVT+R+TF L + W E+E ++T++D VKI+VGNKV
Sbjct: 68 GQERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALPT-WFNELETFTTSEDVVKIIVGNKV 126
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
D++ R VT EEG A + CLF+ECSAK V F +L+ +I+ PSL ++
Sbjct: 127 DKEFSRVVTTEEGQGFADKMGCLFVECSAKKGVGVNGAFDELVNRIISTPSLWQK 181
>gi|395539893|ref|XP_003771898.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Sarcophilus
harrisii]
Length = 205
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 136/198 (68%), Gaps = 5/198 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E +
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKG 184
Query: 191 NQILKQKEVQESARGGNC 208
++ ++E A GG C
Sbjct: 185 VRLSHREESHGGACGGYC 202
>gi|47225130|emb|CAF98757.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 132/197 (67%), Gaps = 8/197 (4%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+ KIL+IG+SGVGKSS+LL ++ D + TIGVDFK+K LTV G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPDQAATIGVDFKVKTLTVDGNKAKLAIWDTAGQ 67
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TLT SYYRGA G+ILVYDVTRRETFT L + W E+E Y T D VK+LVGNK+DR
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRETFTKLDN-WLNELETYCTRNDLVKMLVGNKIDR 126
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVKN 191
++ V + EG+ A++H LF+E SAK + V+ F++L+ KI++ P L +
Sbjct: 127 ENHE-VEKPEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKIIQTPGLWQSEKHGRGV 185
Query: 192 QILKQKEVQESARGGNC 208
Q+ E A GG C
Sbjct: 186 QL-----SDEDAGGGTC 197
>gi|317419712|emb|CBN81748.1| Ras-related protein Rab-18 [Dicentrarchus labrax]
Length = 204
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 134/198 (67%), Gaps = 10/198 (5%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K +TV G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPEQAATIGVDFKVKTITVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRRETF L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRETFAKLDN-WLNELETYCTRNDLVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
R++ + R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L + S
Sbjct: 126 RENHE-LDRAEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWQSESHGRG 184
Query: 191 NQILKQKEVQESARGGNC 208
Q+ E A GG+C
Sbjct: 185 VQL-----TDEDAGGGSC 197
>gi|62859745|ref|NP_001017281.1| RAB18, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267454|emb|CAJ81541.1| RAB18, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134026214|gb|AAI35987.1| RAB18, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 206
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/173 (55%), Positives = 127/173 (73%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TFT L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFTRLDN-WLNELETYCTRNDIVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWE 177
>gi|126341216|ref|XP_001367066.1| PREDICTED: ras-related protein Rab-18-like [Monodelphis domestica]
Length = 205
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 136/198 (68%), Gaps = 5/198 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLSELETYCTRNDIVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E +
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKG 184
Query: 191 NQILKQKEVQESARGGNC 208
++ ++E A GG C
Sbjct: 185 VRLSHREESHGGACGGYC 202
>gi|443895663|dbj|GAC73008.1| GTPase Rab18 [Pseudozyma antarctica T-34]
Length = 233
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 124/175 (70%), Gaps = 4/175 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP---SPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+ KILLIG S VGKSS+LL + P + TIGVD++IK + VGGKR KL+IWDTA
Sbjct: 9 TLKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTA 68
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA G+I+ YDVT+R+TF L + W E+E ++T++D VKI+VGNKV
Sbjct: 69 GQERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALPT-WFNELETFTTSEDVVKIIVGNKV 127
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
D++ R VT +EG A + CLF+ECSAK V F +L+ +I+ PSL ++
Sbjct: 128 DKEFSRVVTTDEGQAFADKMGCLFVECSAKKGVGVNGAFDELVNRIISTPSLWQK 182
>gi|327271994|ref|XP_003220771.1| PREDICTED: ras-related protein Rab-18-like [Anolis carolinensis]
Length = 205
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 135/198 (68%), Gaps = 5/198 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFAKLDN-WLTELETYCTRNDIVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E S
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESESQNRG 184
Query: 191 NQILKQKEVQESARGGNC 208
++ ++ A GG C
Sbjct: 185 VKLSNDEDGHRGACGGYC 202
>gi|319411948|emb|CBQ73991.1| probable Ras-related protein Rab-18 [Sporisorium reilianum SRZ2]
Length = 233
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 123/175 (70%), Gaps = 4/175 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP---SPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+ KILLIG S VGKSS+LL + P + TIGVD++IK + VGGKR KL+IWDTA
Sbjct: 9 TLKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTA 68
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA G+I+ YDVT+R+TF L + W E+E ++T+ D VKI+VGNKV
Sbjct: 69 GQERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALPT-WFNELETFTTSDDVVKIIVGNKV 127
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
D++ R VT +EG A + CLF+ECSAK V F +L+ +I+ PSL ++
Sbjct: 128 DKEFSRVVTTQEGQAFADKMGCLFVECSAKKGVGVNGAFDELVNRIISTPSLWQK 182
>gi|156388137|ref|XP_001634558.1| predicted protein [Nematostella vectensis]
gi|156221642|gb|EDO42495.1| predicted protein [Nematostella vectensis]
Length = 204
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 124/173 (71%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL++G+SGVGKSS+LL ++ DP TIGVDFK+K LTV G + KL IWDTAG
Sbjct: 8 TLKILIVGESGVGKSSLLLRF-TDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYD RETF L W EVE+YST +D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEE-WLNEVEMYSTKKDIVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R++G+ A+ H LF+E SA+ E V+ F++L+ KI++ P L E
Sbjct: 126 KNN-REVDRKQGLQFARRHSMLFIEASARTKEGVQLAFEELVEKIIQTPGLWE 177
>gi|348525554|ref|XP_003450287.1| PREDICTED: ras-related protein Rab-18-like [Oreochromis niloticus]
Length = 204
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 134/198 (67%), Gaps = 10/198 (5%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP S TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTEDTF-DPEQSATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRRETFT L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRETFTKLDN-WLSELETYCTRNDLVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+++ + R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L + +
Sbjct: 126 KENHE-LDRAEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWQS-----E 179
Query: 191 NQILKQKEVQESARGGNC 208
N + E A GG C
Sbjct: 180 NHGRAVQLTDEDAGGGTC 197
>gi|34068436|gb|AAQ56773.1| ras-related GTP-binding protein Rab18 [Pelophylax ridibundus]
Length = 205
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 126/176 (71%), Gaps = 5/176 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKAKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFARLDN-WLNELETYCTRNDIVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
+D+ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E S
Sbjct: 126 KDN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWESES 180
>gi|159479896|ref|XP_001698022.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158273821|gb|EDO99607.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 210
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 125/184 (67%), Gaps = 1/184 (0%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGK 59
M ++ S D + KILL+GDSGVGK+ +L +S D + TIGVDF +K ++V K
Sbjct: 1 MAVEMQEGSVDLTLKILLLGDSGVGKTCLLTRFAHDSFDDKVASTIGVDFAVKRMSVYDK 60
Query: 60 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQD 119
R+KLT+WDTAGQE+F TLTS++YRGA GIILVYDV+R +T +L W +E+E+Y T D
Sbjct: 61 RVKLTVWDTAGQEKFRTLTSTFYRGAKGIILVYDVSRPDTLRHLEEQWMRELEMYGTESD 120
Query: 120 CVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVP 179
V+++V NKVD R V+ EG A+ H CLF+E SAK V F++L+ KILE P
Sbjct: 121 AVRMVVANKVDVGEARRVSWHEGSDFARRHGCLFVETSAKTNVAVANAFEELVLKILETP 180
Query: 180 SLLE 183
SLLE
Sbjct: 181 SLLE 184
>gi|432926809|ref|XP_004080935.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-18-like
[Oryzias latipes]
Length = 204
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 124/169 (73%), Gaps = 5/169 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP S TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTEDTF-DPEQSATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRRETFT L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRETFTKLDN-WLNELETYCTRNDLVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVP 179
++S V R EG+ A++H LF+E SAK + V+ F++L+ K+++ P
Sbjct: 126 KESHE-VDRAEGLKFARKHSTLFIEASAKTKDGVQCAFEELVEKVIQTP 173
>gi|57530682|ref|NP_001006355.1| ras-related protein Rab-18 [Gallus gallus]
gi|82233892|sp|Q5ZLG1.1|RAB18_CHICK RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|53129987|emb|CAG31432.1| hypothetical protein RCJMB04_6g4 [Gallus gallus]
Length = 206
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/176 (54%), Positives = 127/176 (72%), Gaps = 5/176 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E S
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESES 180
>gi|149028369|gb|EDL83766.1| rCG40811, isoform CRA_b [Rattus norvegicus]
Length = 206
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 136/198 (68%), Gaps = 8/198 (4%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E + +
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN---Q 181
Query: 191 NQILKQKEVQESARGGNC 208
N+ +K +E GG C
Sbjct: 182 NKGVKLSPREECHGGGAC 199
>gi|221127104|ref|XP_002163996.1| PREDICTED: ras-related protein Rab-18-like [Hydra magnipapillata]
Length = 204
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 125/175 (71%), Gaps = 3/175 (1%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSV-HDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+ KIL+IG+SGVGKSS+L+ ++ D TIGVDFK+K + V G R+KL +WDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLIRFTDDTFDQDIGATIGVDFKVKTVEVDGNRMKLALWDTAGQ 67
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TLT SYYRGA G+ILVYDV+ R+TF L+ W E E Y+T QD VK+LVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVSVRQTFDKLND-WLNECETYATKQDIVKMLVGNKIDK 126
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
R VTR+EG+ A+ H LF+E SAK + V+ F++L+ KIL+ P L E+ S
Sbjct: 127 PG-RQVTRQEGLQFARRHSMLFIEASAKTKDGVECAFEELVEKILQTPGLWEKES 180
>gi|148224120|ref|NP_001079868.1| uncharacterized protein LOC379558 [Xenopus laevis]
gi|33416686|gb|AAH56054.1| MGC69017 protein [Xenopus laevis]
Length = 205
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 127/173 (73%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TFT L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFTRLDN-WLNELETYCTRNDIVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H L++E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLYIEASAKTRDGVQCAFEELVEKIIQTPGLWE 177
>gi|71019037|ref|XP_759749.1| hypothetical protein UM03602.1 [Ustilago maydis 521]
gi|46099272|gb|EAK84505.1| hypothetical protein UM03602.1 [Ustilago maydis 521]
Length = 233
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 124/175 (70%), Gaps = 4/175 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP---SPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+ KILLIG S VGKSS+LL + P + TIGVD++IK + VGGKR KL+IWDTA
Sbjct: 9 TLKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTA 68
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA G+I+ YDVT+R+TF L + W E+E ++T+ D VK++VGNKV
Sbjct: 69 GQERFRTLTSSYYRGAQGVIITYDVTQRDTFDALPT-WFNELETFTTSDDVVKVIVGNKV 127
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
D++ R VT +EG A++ CLF+ECSAK V F +L+ +I+ PSL ++
Sbjct: 128 DKEFSRVVTTKEGQEFAEKMGCLFVECSAKKGVGVNGAFDELVNRIISTPSLWQK 182
>gi|296531381|ref|NP_001171837.1| ras-related protein Rab-18-like [Saccoglossus kowalevskii]
Length = 207
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 124/175 (70%), Gaps = 3/175 (1%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDPSP-TIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+ KIL+IG+SGVGKSS+LL ++ P TIGVDFK+K L+V G KL IWDTAGQ
Sbjct: 10 TLKILIIGESGVGKSSLLLRFTDDTFDPEQPATIGVDFKVKTLSVEGNTTKLAIWDTAGQ 69
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TLT SYYRGA G+ILVYDV+ R++F L +W E+E +ST D VK+LVGNK+D
Sbjct: 70 ERFRTLTPSYYRGAQGVILVYDVSNRKSFQKL-DMWLNELETFSTKSDIVKMLVGNKIDM 128
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
D +R V R+EG+ A++H LF+E SAK E V+ F++L+ K+++ P L E S
Sbjct: 129 D-KREVDRQEGLKFARKHAMLFIEASAKTKEGVQVAFEELVEKVIQTPGLWENDS 182
>gi|149634680|ref|XP_001506607.1| PREDICTED: ras-related protein Rab-18-like [Ornithorhynchus
anatinus]
Length = 206
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 126/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|291401957|ref|XP_002717338.1| PREDICTED: RAB18, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 206
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 99/198 (50%), Positives = 135/198 (68%), Gaps = 8/198 (4%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E + +
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESET---Q 181
Query: 191 NQILKQKEVQESARGGNC 208
N+ +K +E G C
Sbjct: 182 NKGVKLSHREEGHGAGAC 199
>gi|224044745|ref|XP_002187766.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Taeniopygia
guttata]
Length = 207
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 127/176 (72%), Gaps = 5/176 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V++LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVQMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E S
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESES 180
>gi|147900430|ref|NP_001084300.1| RAB18, member RAS oncogene family [Xenopus laevis]
gi|49256207|gb|AAH74233.1| RAB18 protein [Xenopus laevis]
Length = 206
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNNAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDV RR+TFT L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVARRDTFTRLDN-WLNELETYCTRNDIVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWE 177
>gi|260794026|ref|XP_002592011.1| hypothetical protein BRAFLDRAFT_122387 [Branchiostoma floridae]
gi|229277224|gb|EEN48022.1| hypothetical protein BRAFLDRAFT_122387 [Branchiostoma floridae]
Length = 213
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 127/183 (69%), Gaps = 11/183 (6%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K LTV G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPEIAATIGVDFKVKTLTVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDV+ R +F L W E+E +ST QD VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVSSRNSFNRLEQ-WLSELETFSTKQDIVKMLVGNKID 125
Query: 131 RDS-------ERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+ S ++ V R EG+ A++H+ LF+E SAK E V+ F++L+ KI++ P L E
Sbjct: 126 KASTLSSVQDKKEVDRNEGLKFARKHQMLFIEASAKTREGVQCAFEELVEKIIQTPGLWE 185
Query: 184 QGS 186
S
Sbjct: 186 SDS 188
>gi|27882648|gb|AAH43996.1| RAB18 protein, partial [Xenopus laevis]
Length = 212
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G KL IWDTAG
Sbjct: 14 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNNAKLAIWDTAG 72
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDV RR+TFT L + W E+E Y T D VK+LVGNK+D
Sbjct: 73 QERFRTLTPSYYRGAQGVILVYDVARRDTFTRLDN-WLNELETYCTRNDIVKMLVGNKID 131
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 132 KEN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWE 183
>gi|147788167|emb|CAN64836.1| hypothetical protein VITISV_030374 [Vitis vinifera]
Length = 240
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 106/201 (52%), Positives = 130/201 (64%), Gaps = 13/201 (6%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
YD SFKILLIGDS VGKSS+L+S IS+SV D +PTIGVDFKIK LTVGGKRLKLTIWDT
Sbjct: 53 YDLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTG 112
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
+ T S ++ + V+ T LS W ++E V K+
Sbjct: 113 AKL---THLSKFFIFDGAMRFVH--TSGNFVPRLSIHWKFDLEEGGE--------VFYKL 159
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D +SER V+REEG+ LA+EH CLF ECSAK E+V++CF++L KI+EVPSLLE+GS V
Sbjct: 160 DLESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVPSLLEEGSTVG 219
Query: 190 KNQILKQKEVQESARGGNCCS 210
K ILK K + G CCS
Sbjct: 220 KRNILKPKPENQPPPTGGCCS 240
>gi|402587142|gb|EJW81078.1| member Ras oncogene family RAB18A [Wuchereria bancrofti]
Length = 200
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS++L + ++ DP + TIGVDF++ + V R+KL IWDTAG
Sbjct: 10 TLKILIIGESGVGKSSLMLRFVDDT-FDPEIAATIGVDFRVTTMMVDQNRVKLAIWDTAG 68
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+I VYDV+ R+TF LS W EV+ YST D VK+L+GNK+D
Sbjct: 69 QERFRTLTPSYYRGAQGVICVYDVSNRQTFERLSH-WMNEVDTYSTKTDAVKMLIGNKID 127
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
S R VTREEG+ A++H+ LF+E SAK E V+ F++L+ K+L+ P L +
Sbjct: 128 I-SNREVTREEGLQFAKKHRMLFIEASAKTREGVQCAFEELIEKVLQTPGLWD 179
>gi|395827177|ref|XP_003786782.1| PREDICTED: ras-related protein Rab-18 [Otolemur garnettii]
Length = 206
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|301788416|ref|XP_002929624.1| PREDICTED: ras-related protein Rab-18-like [Ailuropoda melanoleuca]
Length = 206
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|355714854|gb|AES05139.1| RAB18, member RAS oncoprotein family [Mustela putorius furo]
Length = 205
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|149016250|gb|EDL75496.1| rCG62892 [Rattus norvegicus]
Length = 206
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 124/173 (71%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG SGVGKSS+LL N+ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGKSGVGKSSLLLRFTDNT-FDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLYN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|335775453|gb|AEH58577.1| Ras-related protein Rab-18-like protein [Equus caballus]
Length = 206
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|115495023|ref|NP_001068967.1| ras-related protein Rab-18 [Bos taurus]
gi|335296519|ref|XP_003357800.1| PREDICTED: ras-related protein Rab-18-like [Sus scrofa]
gi|426240891|ref|XP_004014327.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Ovis aries]
gi|122142144|sp|Q0IIG8.1|RAB18_BOVIN RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|113911817|gb|AAI22651.1| RAB18, member RAS oncogene family [Bos taurus]
gi|296481383|tpg|DAA23498.1| TPA: ras-related protein Rab-18 [Bos taurus]
gi|385281370|gb|AFI57837.1| ras-related protein Rab-18 [Capra hircus]
Length = 206
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|10880989|ref|NP_067075.1| ras-related protein Rab-18 isoform 1 [Homo sapiens]
gi|197102556|ref|NP_001127616.1| ras-related protein Rab-18 [Pongo abelii]
gi|388452921|ref|NP_001253719.1| RAB18, member RAS oncogene family [Macaca mulatta]
gi|332240536|ref|XP_003269443.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Nomascus
leucogenys]
gi|332833815|ref|XP_003312545.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Pan troglodytes]
gi|397501611|ref|XP_003821474.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Pan paniscus]
gi|397501613|ref|XP_003821475.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Pan paniscus]
gi|402879861|ref|XP_003903543.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Papio anubis]
gi|403295005|ref|XP_003938447.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Saimiri
boliviensis boliviensis]
gi|410043688|ref|XP_003951660.1| PREDICTED: ras-related protein Rab-18 [Pan troglodytes]
gi|426364298|ref|XP_004049255.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Gorilla gorilla
gorilla]
gi|12230528|sp|Q9NP72.1|RAB18_HUMAN RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|75070476|sp|Q5R5H5.1|RAB18_PONAB RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|7381201|gb|AAF61433.1|AF137372_1 ras-related protein RAB18 [Homo sapiens]
gi|12239330|gb|AAG49435.1|AF136974_1 ras-related protein 18 [Homo sapiens]
gi|20379076|gb|AAM21098.1|AF498950_1 small GTP binding protein RAB18 [Homo sapiens]
gi|33150584|gb|AAP97170.1|AF087860_1 rab18 [Homo sapiens]
gi|7531023|emb|CAB86486.1| ras-related small GTPase RAB18 [Homo sapiens]
gi|12052987|emb|CAB66668.1| hypothetical protein [Homo sapiens]
gi|15929113|gb|AAH15014.1| RAB18, member RAS oncogene family [Homo sapiens]
gi|20809384|gb|AAH29350.1| RAB18, member RAS oncogene family [Homo sapiens]
gi|32880023|gb|AAP88842.1| RAB18, member RAS oncogene family [Homo sapiens]
gi|49065336|emb|CAG38486.1| RAB18 [Homo sapiens]
gi|55732582|emb|CAH92991.1| hypothetical protein [Pongo abelii]
gi|61360907|gb|AAX41949.1| RAB18 member RAS oncogene family [synthetic construct]
gi|61360911|gb|AAX41950.1| RAB18 member RAS oncogene family [synthetic construct]
gi|90076230|dbj|BAE87795.1| unnamed protein product [Macaca fascicularis]
gi|90086345|dbj|BAE91725.1| unnamed protein product [Macaca fascicularis]
gi|117645108|emb|CAL38020.1| hypothetical protein [synthetic construct]
gi|119606460|gb|EAW86054.1| RAB18, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119606461|gb|EAW86055.1| RAB18, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|193786050|dbj|BAG50939.1| unnamed protein product [Homo sapiens]
gi|208967232|dbj|BAG73630.1| RAB18, member RAS oncogene family [synthetic construct]
gi|380810740|gb|AFE77245.1| ras-related protein Rab-18 [Macaca mulatta]
gi|383411947|gb|AFH29187.1| ras-related protein Rab-18 [Macaca mulatta]
gi|384945898|gb|AFI36554.1| ras-related protein Rab-18 [Macaca mulatta]
gi|410209604|gb|JAA02021.1| RAB18, member RAS oncogene family [Pan troglodytes]
gi|410260764|gb|JAA18348.1| RAB18, member RAS oncogene family [Pan troglodytes]
gi|410305300|gb|JAA31250.1| RAB18, member RAS oncogene family [Pan troglodytes]
gi|410332701|gb|JAA35297.1| RAB18, member RAS oncogene family [Pan troglodytes]
Length = 206
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|417397093|gb|JAA45580.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 206
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRSEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|324523684|gb|ADY48284.1| Ras-related protein Rab-18 [Ascaris suum]
Length = 200
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 124/173 (71%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS++L + ++ DP S TIGVDF++ TV G R+KL IWDTAG
Sbjct: 11 TLKILIIGESGVGKSSLMLRFVDDT-FDPEISATIGVDFRVTSRTVDGNRVKLAIWDTAG 69
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+I VYDVT R +F L W EV+ YST + +K+LVGNK+D
Sbjct: 70 QERFRTLTPSYYRGAQGVICVYDVTNRCSFERLDH-WMNEVDTYSTKNNAIKMLVGNKID 128
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+ S R +TREEG+ A+ H+ LF+E SAK E V+ F++L+ K+++ P L E
Sbjct: 129 KTS-RVITREEGLQFAKRHRMLFIEASAKTREGVQCAFEELIEKVIQTPGLWE 180
>gi|410963376|ref|XP_003988241.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Felis catus]
Length = 206
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|344277582|ref|XP_003410579.1| PREDICTED: ras-related protein Rab-18-like [Loxodonta africana]
Length = 206
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFLKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|221052060|ref|XP_002257606.1| Rab18 GTPase [Plasmodium knowlesi strain H]
gi|193807436|emb|CAQ37942.1| Rab18 GTPase, putative [Plasmodium knowlesi strain H]
Length = 201
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/196 (52%), Positives = 132/196 (67%), Gaps = 4/196 (2%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIW 66
N YDY K+LL+GDS VGKSSIL N + TIG+DFK+K L + K +K+ IW
Sbjct: 5 NKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIW 64
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF TLTS+YYR AH IILVYD T RE+F NL VW E++ YSTN++ +K+LV
Sbjct: 65 DTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKMLVA 123
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
NK+D+ + VT++EG A E+ LF E SAKN ++ CF++L+ +IL PSLLE S
Sbjct: 124 NKIDK-ANHEVTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLEL-S 181
Query: 187 AVVKNQILKQKEVQES 202
V KN L +KE S
Sbjct: 182 VVTKNLKLSKKEENRS 197
>gi|219116893|ref|XP_002179241.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409132|gb|EEC49064.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 213
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 122/177 (68%), Gaps = 6/177 (3%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWD 67
YDY FK+L+IGD+ VGKSS+LL +S + TIGVDFK+K L V GKR+KLTIWD
Sbjct: 10 PYDYLFKVLIIGDASVGKSSMLLRFTDDSFDEHIQSTIGVDFKVKHLEVEGKRVKLTIWD 69
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYST--NQDCVKILV 125
TAGQERF TLTSSYYRGAHG++LVYDVTR ++F NL W KEV++YS + VK+LV
Sbjct: 70 TAGQERFRTLTSSYYRGAHGVVLVYDVTRTDSFENLQQ-WLKEVQMYSPGNGESVVKLLV 128
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
GNK D ER V EE A+ LFLE SAK ++Q F +++ K+LE P L
Sbjct: 129 GNKCDL--ERQVPFEEADAWARSQGMLFLEASAKTRLGIRQVFTEVVKKMLENPETL 183
>gi|405970601|gb|EKC35494.1| Ras-related protein Rab-18-B [Crassostrea gigas]
Length = 203
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 127/181 (70%), Gaps = 5/181 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLK 62
+G+ + KIL+IG+S VGKSS+LL ++ DP + TIGVDFK+K L V G R K
Sbjct: 1 MGDTEVLTTLKILIIGESSVGKSSLLLRF-TDDTFDPEQAATIGVDFKVKTLQVDGNRAK 59
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF TLT SYYRGA G ILVYDVT R +F L VW E+E +ST D +K
Sbjct: 60 LAIWDTAGQERFRTLTPSYYRGAQGAILVYDVTNRASFQKL-DVWLNELETFSTKHDLIK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
+LVGNK+D+++ R V++E+G+ A++H LF+E SAK E V+ F++L+ KI++ P L
Sbjct: 119 MLVGNKIDQEN-REVSKEDGLKFARKHHMLFIEASAKTREGVQCAFEELVEKIIQTPGLW 177
Query: 183 E 183
E
Sbjct: 178 E 178
>gi|223996783|ref|XP_002288065.1| at-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220977181|gb|EED95508.1| at-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 197
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 129/190 (67%), Gaps = 11/190 (5%)
Query: 2 GSKVGNN-SYDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGK 59
GS G + YD+ FK+L+IGD+GVGKSS+L+ ++ + TIGVDFK+K L + K
Sbjct: 9 GSSKGQSFPYDHLFKLLMIGDAGVGKSSMLIRFTDDAFDEHIQSTIGVDFKVKHLELNNK 68
Query: 60 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTN-- 117
R+KLT+WDTAGQERF TLTSSYYRGA G+++VYDVTRR++F NL W KEV+LYS N
Sbjct: 69 RIKLTVWDTAGQERFRTLTSSYYRGAQGVVMVYDVTRRDSFDNLEQ-WLKEVKLYSPNNG 127
Query: 118 QDCVKILVGNKVD------RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDL 171
+ VK+LVGNK+D ER V R E A+ LFLE SAK V++ F ++
Sbjct: 128 EGVVKLLVGNKIDLADGDGSGYERQVDRHEAEEWARNQGMLFLEASAKTRMGVQESFMEV 187
Query: 172 LYKILEVPSL 181
++KILE P L
Sbjct: 188 VHKILEDPDL 197
>gi|156094918|ref|XP_001613495.1| small GTPase Rab18 [Plasmodium vivax Sal-1]
gi|148802369|gb|EDL43768.1| small GTPase Rab18, putative [Plasmodium vivax]
Length = 201
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 131/192 (68%), Gaps = 4/192 (2%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIW 66
N YDY K+LL+GDS VGKSSIL N + TIG+DFK+K L + K +K+ IW
Sbjct: 5 NKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIW 64
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF TLTS+YYR AH IILVYD T RE+F NL VW E++ YSTN++ +K+LV
Sbjct: 65 DTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENLD-VWIHEIDKYSTNKNAIKMLVA 123
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
NK+D+ + VT++EG A E+ LF E SAKN ++ CF++L+ +IL PSLLE S
Sbjct: 124 NKIDK-ANHEVTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLEL-S 181
Query: 187 AVVKNQILKQKE 198
V KN L +KE
Sbjct: 182 IVTKNLKLSKKE 193
>gi|389582066|dbj|GAB64466.1| small GTPase Rab18 [Plasmodium cynomolgi strain B]
Length = 201
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 131/192 (68%), Gaps = 4/192 (2%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIW 66
N YDY K+LL+GDS VGKSSIL N + TIG+DFK+K L + K +K+ IW
Sbjct: 5 NKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIW 64
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF TLTS+YYR AH IILVYD T RE+F NL VW E++ YSTN++ +K+LV
Sbjct: 65 DTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENLD-VWIHEIDKYSTNKNAIKMLVA 123
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
NK+D+ + VT++EG A E+ LF E SAKN ++ CF++L+ +IL PSLLE S
Sbjct: 124 NKIDK-ANHEVTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLEL-S 181
Query: 187 AVVKNQILKQKE 198
V KN L +KE
Sbjct: 182 IVTKNLKLSKKE 193
>gi|62897867|dbj|BAD96873.1| RAB18, member RAS oncogene family variant [Homo sapiens]
Length = 206
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL +WDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLALWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|83753568|pdb|1X3S|A Chain A, Crystal Structure Of Human Rab18 In Complex With Gppnhp
Length = 195
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 124/173 (71%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 15 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 73
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V LVGNK+D
Sbjct: 74 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNXLVGNKID 132
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 133 KEN-REVDRNEGLKFARKHSXLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 184
>gi|281207535|gb|EFA81718.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 202
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 131/198 (66%), Gaps = 4/198 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSV-HDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
++K+LLIGDS VGK+SI+ + ++ D TIGV+FK+K + V GK + L IWDTAGQ
Sbjct: 6 NYKVLLIGDSDVGKTSIVKRFLDDTFDEDLLCTIGVEFKMKAVEVDGKSVTLCIWDTAGQ 65
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
E+F L SSYYRGAHGIIL YDVT+RETF NL W E+E +S + VK+LVGNK+D+
Sbjct: 66 EKFRALISSYYRGAHGIILTYDVTKRETFKNL-QYWLNEIETFSNRANVVKLLVGNKIDK 124
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVKN 191
++ R VTREEG+ A+ F+ECSAK ++Q F++L +KI+E PSL E K
Sbjct: 125 EN-REVTREEGLEFAKSKAMFFIECSAKTKIGIQQAFEELAHKIIETPSLSEDNEN-KKK 182
Query: 192 QILKQKEVQESARGGNCC 209
+I ES + G C
Sbjct: 183 KIKATVSADESNQQGGYC 200
>gi|296206366|ref|XP_002750219.1| PREDICTED: uncharacterized protein LOC100402013 isoform 1
[Callithrix jacchus]
Length = 206
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 124/173 (71%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ K L+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKFLIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|124512632|ref|XP_001349449.1| PfRab18, GTPase [Plasmodium falciparum 3D7]
gi|19310063|emb|CAD27350.1| Rab18 GTPase [Plasmodium falciparum]
gi|23499218|emb|CAD51298.1| PfRab18, GTPase [Plasmodium falciparum 3D7]
Length = 201
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/196 (52%), Positives = 132/196 (67%), Gaps = 4/196 (2%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIW 66
N YDY K+LL+GDS VGKSSIL N + TIG+DFK+K L + K +K+ IW
Sbjct: 5 NKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIW 64
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF TLTS+YYR AH IILVYD T RE+F NL VW E++ YSTN++ +K+LV
Sbjct: 65 DTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWINEIDKYSTNKNAIKMLVA 123
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
NK+D+ + VT++EG A E+ LF E SAKN ++ CF++L+ +IL PSLLE S
Sbjct: 124 NKIDKPNHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLEL-S 181
Query: 187 AVVKNQILKQKEVQES 202
V KN L +KE S
Sbjct: 182 IVTKNLKLGKKEESRS 197
>gi|158287951|ref|XP_309827.4| AGAP010875-PA [Anopheles gambiae str. PEST]
gi|157019435|gb|EAA05523.4| AGAP010875-PA [Anopheles gambiae str. PEST]
Length = 203
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+FKIL+IG+SGVGKSS++L N D + TIGVDFK K+L + G ++KL IWDTAGQ
Sbjct: 9 TFKILIIGESGVGKSSLMLRFTENDFDSDQALTIGVDFKTKMLDLDGVKVKLAIWDTAGQ 68
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TLT SYYR A G ILVYDVT+ +TF L S W E+E+Y T + K++VGNK+D
Sbjct: 69 ERFRTLTPSYYRDAQGAILVYDVTKPDTFQKLES-WLNELEIYGTRNNMAKMVVGNKIDH 127
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
RA+ REEG A++H+ +F+E SAK +E VK F++++ KI+E L E+
Sbjct: 128 -PNRAIGREEGFRFAKKHRMMFIETSAKTSEGVKDAFEEVVRKIMETDGLWER 179
>gi|145508820|ref|XP_001440354.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833819|emb|CAI39368.1| rab_A22 [Paramecium tetraurelia]
gi|124407571|emb|CAK72957.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FKILLIG+S VGKSS+LL N ++ PTIGVDFKI+ + GK +KL IWDT
Sbjct: 7 YDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQIWDT 66
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T+SYY+GAHGIILVYDVT +++F ++ + W EVE Y+ N++ V++LVGNK
Sbjct: 67 AGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVEN-WLAEVEKYA-NENVVRVLVGNK 124
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
VD +S+R VT EEG LA F+E SAKN+ +V++ F L +I + + V
Sbjct: 125 VDLESKREVTSEEGKELADSLNIRFIETSAKNSSNVEKAFITLANEIKAKVAKSSEAIPV 184
Query: 189 VKNQILKQKEVQESARGGNCC 209
+ + Q + + CC
Sbjct: 185 KTGPRITPDQQQNTVKDTGCC 205
>gi|312084876|ref|XP_003144454.1| rab family protein 18 [Loa loa]
gi|307760381|gb|EFO19615.1| Ras-like protein Rab-18 [Loa loa]
Length = 200
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 124/173 (71%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL++G+SGVGKSS++L + ++ DP + TIG+DF++ + V R+KL IWDTAG
Sbjct: 10 TLKILIVGESGVGKSSLMLRFVDDT-FDPEIAATIGIDFRVTSMMVDQNRVKLAIWDTAG 68
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+I VYDV+ R+TF L W EV+ YST D VK+LVGNK+D
Sbjct: 69 QERFRTLTPSYYRGAQGVICVYDVSNRQTFEKLGH-WMNEVDTYSTKMDAVKMLVGNKID 127
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
S R VTREEG+ A++++ LF+E SAK E V+ F++L+ KIL+ P L +
Sbjct: 128 M-SNREVTREEGLEFAKKYRMLFIEASAKTREGVQCAFEELIEKILQTPGLWD 179
>gi|321457240|gb|EFX68330.1| hypothetical protein DAPPUDRAFT_301483 [Daphnia pulex]
Length = 207
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 125/172 (72%), Gaps = 3/172 (1%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSV-HDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+ KIL+ G+SGVGKSS+LL ++ ++ + TIGVDFK+KL+ + G +KL IWDTAGQ
Sbjct: 8 TLKILITGESGVGKSSLLLRFTDDTFDNEQAATIGVDFKVKLINIDGNNVKLAIWDTAGQ 67
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TLT SYYR A G ILVYDV R++F+ L + W E+E Y+TN + VK+L+GNK+D+
Sbjct: 68 ERFRTLTPSYYRNAQGAILVYDVCSRQSFSRLDA-WFDELETYATNTNIVKMLIGNKIDK 126
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+ R V+REEG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 127 E-RREVSREEGLKFAKKHSMLFIEASAKTKDGVQMAFEELVQKIIQTPGLWE 177
>gi|145535548|ref|XP_001453507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833747|emb|CAI39343.1| rab_B22 [Paramecium tetraurelia]
gi|124421229|emb|CAK86110.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 136/204 (66%), Gaps = 9/204 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FKILLIG+S VGKSS+LL N ++ PTIGVDFKI+ + GK +KL IWDT
Sbjct: 7 YDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQIWDT 66
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T+SYY+GAHGIILVYDVT +++F ++ + W EVE Y+ N++ V++LVGNK
Sbjct: 67 AGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVEN-WLAEVEKYA-NENVVRVLVGNK 124
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
VD +S+R VT EEG LA F+E SAKN+ +V++ F L E+ + + +GS
Sbjct: 125 VDLESKREVTFEEGKELADSLNIRFIETSAKNSSNVEKAFITLAN---EIKAKVAKGSEA 181
Query: 189 VKNQI---LKQKEVQESARGGNCC 209
V + + + Q + + CC
Sbjct: 182 VPIKTGPRITPDQQQNTVKDTGCC 205
>gi|268575806|ref|XP_002642883.1| C. briggsae CBR-RAB-18 protein [Caenorhabditis briggsae]
gi|74765201|sp|P90726.1|RAB18_CAEBR RecName: Full=Ras-related protein Rab-18
gi|1710360|gb|AAB38279.1| membrane associated GTP binding protein RAB18 [Caenorhabditis
briggsae]
Length = 202
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 123/180 (68%), Gaps = 5/180 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS++L + + V DP + TIGVDF++ +T+ G R+KL IWDTAG
Sbjct: 11 TLKILIIGESGVGKSSLMLRFVDD-VFDPEQAATIGVDFRVTSMTIDGNRVKLAIWDTAG 69
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+I VYDVT R +F L W EV+ Y TN + +K++V NK+D
Sbjct: 70 QERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLKH-WMTEVDTYCTNDNVIKMMVANKID 128
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
R VTREEG+ A+ H+ LF+E SAK E V+ F++L+ KI++ P L + +
Sbjct: 129 M-PNRTVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLWDNDRPTFR 187
>gi|25151658|ref|NP_741092.1| Protein RAB-18, isoform b [Caenorhabditis elegans]
gi|75017365|sp|Q8MXS1.1|RAB18_CAEEL RecName: Full=Ras-related protein Rab-18
gi|351018339|emb|CCD62283.1| Protein RAB-18, isoform b [Caenorhabditis elegans]
Length = 203
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 123/173 (71%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS++L + + V DP + TIGVDF++ + + G R+KL IWDTAG
Sbjct: 11 TLKILIIGESGVGKSSLMLRFVDD-VFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAG 69
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+I VYDVT R +F L+ W +EV+ Y TN + +K++V NK+D
Sbjct: 70 QERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNH-WMQEVDTYCTNDNIIKMMVANKID 128
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
R VTREEG+ A+ H+ LF+E SAK E V+ F++L+ KI++ P L +
Sbjct: 129 M-PNRVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLWD 180
>gi|225719394|gb|ACO15543.1| Ras-related protein Rab-18 [Caligus clemensi]
Length = 212
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 125/176 (71%), Gaps = 4/176 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
S K+L+IG+S VGKSS+ L ++ DP S TIGVDFK+K +TV G R+KL IWDTAG
Sbjct: 11 SLKLLIIGESCVGKSSLQLRFTEDAF-DPEHSATIGVDFKVKTITVQGNRVKLAIWDTAG 69
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRG G ILVYDVT R++F+N+ + W E++ Y+T D VK+LVGNK D
Sbjct: 70 QERFRTLTPSYYRGGQGAILVYDVTNRDSFSNVEN-WLNELDTYATIHDIVKMLVGNKCD 128
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
+ +R +++EEG A++H+ +F+E SAK E V+ F++L+ I++ P L E S
Sbjct: 129 LEEKRVISKEEGQKCARKHRMMFIEASAKTREGVQLAFEELVENIIQTPELWEASS 184
>gi|296085943|emb|CBI31384.3| unnamed protein product [Vitis vinifera]
Length = 165
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/113 (76%), Positives = 93/113 (82%), Gaps = 1/113 (0%)
Query: 47 VDFKIKLLTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSV 106
VDFKI LLT+GGK+LKLTIWDTAGQERFGTLT++YYRG HGIILVYDVTR+ETFTNLS V
Sbjct: 41 VDFKIILLTIGGKKLKLTIWDTAGQERFGTLTNTYYRGVHGIILVYDVTRQETFTNLSDV 100
Query: 107 WAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAK 159
W KEVE YSTN C+ VGNKVDRDSER VTR EGM LAQEH FL K
Sbjct: 101 WEKEVEFYSTNHKCIDFFVGNKVDRDSERNVTR-EGMSLAQEHNVHFLNVVLK 152
>gi|118102871|ref|XP_423284.2| PREDICTED: ras-related protein Rab-18-B-like [Gallus gallus]
Length = 204
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 125/176 (71%), Gaps = 5/176 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ K++LIGDS VGKSS+LL S +PS PTI VDFK+K + V G ++L IWDTAG
Sbjct: 7 TVKLILIGDSAVGKSSLLLRFAEGS-FEPSLKPTICVDFKVKKMVVDGHTVQLAIWDTAG 65
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TL SYYRG GI+LVYDVTR++TFT L S W E+E+Y+T + VK+LVGNK D
Sbjct: 66 QERFRTLNPSYYRGTQGIVLVYDVTRKDTFTGLDS-WLNELEIYNTKSNTVKMLVGNKTD 124
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
+ +R V R EG+ A++ LF+E SAK + V+ F++L+ KIL+ P+LL++ +
Sbjct: 125 K-PDREVERREGLQFAKKRSLLFIETSAKTEDGVQHAFEELVIKILQTPNLLDKST 179
>gi|327275917|ref|XP_003222718.1| PREDICTED: ras-related protein Rab-18-B-like [Anolis carolinensis]
Length = 212
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 129/189 (68%), Gaps = 9/189 (4%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ K+LLIGDSGVGKSS+LL + +P PTIGVDFKIK + VG L++ IWDTAG
Sbjct: 16 TLKLLLIGDSGVGKSSLLLRFTEDQ-FEPYRKPTIGVDFKIKKVIVGDLPLQVAIWDTAG 74
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA GIILVYDVTRRETF L S W +E+E++ T ++ VKILVGNK+D
Sbjct: 75 QERFRTLTPSYYRGAQGIILVYDVTRRETFLGLES-WLQELEVF-TKKEVVKILVGNKID 132
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL---EQGSA 187
++ V R EG+ A+ H LF E SAK V+ F +++ +IL+ P L QG
Sbjct: 133 -ETRHEVERREGLRFARRHSLLFAEASAKMKYGVQNIFDEVVIRILQTPGLWNIKRQGLR 191
Query: 188 VVKNQILKQ 196
+ ++Q LK+
Sbjct: 192 LTESQTLKE 200
>gi|68075529|ref|XP_679683.1| Rab18 GTPase [Plasmodium berghei strain ANKA]
gi|56500482|emb|CAH95262.1| Rab18 GTPase, putative [Plasmodium berghei]
Length = 201
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 131/192 (68%), Gaps = 4/192 (2%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIW 66
N YDY K+LL+GDS VGKSSIL N + TIG+DFK+K L + K +K+ IW
Sbjct: 5 NKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIW 64
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF TLTS+YYR AH IILVYD T RE+F NL VW E++ YSTN++ +K+LV
Sbjct: 65 DTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKMLVA 123
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
NK+D+ + VT++EG A E+ LF E SAKN ++ CF++L+ +IL PSLLE S
Sbjct: 124 NKIDKPNHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLEL-S 181
Query: 187 AVVKNQILKQKE 198
V KN L +K+
Sbjct: 182 VVTKNLKLGKKD 193
>gi|70947149|ref|XP_743217.1| Rab18 GTPase [Plasmodium chabaudi chabaudi]
gi|56522611|emb|CAH89069.1| Rab18 GTPase, putative [Plasmodium chabaudi chabaudi]
Length = 200
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 130/192 (67%), Gaps = 5/192 (2%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIW 66
N YDY K+LL+GDS VGKSSIL N TIG+DFK+K L + K +K+ IW
Sbjct: 5 NKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEKKVLSTIGIDFKVKYLKIDNKTIKVGIW 64
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF TLTS+YYR AH IILVYD T RE+F NL VW E++ YSTN++ +K+LV
Sbjct: 65 DTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKMLVA 123
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
NK+D+ + VT++EG A E+ LF E SAKN ++ CF++L+ +IL PSLLE S
Sbjct: 124 NKIDKPNHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLE--S 180
Query: 187 AVVKNQILKQKE 198
V KN L +K+
Sbjct: 181 VVTKNLKLGKKD 192
>gi|341891892|gb|EGT47827.1| hypothetical protein CAEBREN_03430 [Caenorhabditis brenneri]
Length = 202
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 131/199 (65%), Gaps = 11/199 (5%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS++L + + V DP + TIGVDF++ + + G R+KL IWDTAG
Sbjct: 11 TLKILIIGESGVGKSSLMLRFVDD-VFDPEQAATIGVDFRVTSMVIDGNRVKLAIWDTAG 69
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+I VYDVT R +F L+ W EV+ Y TN++ +K++V NK+D
Sbjct: 70 QERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNH-WMTEVDTYCTNENIIKMMVANKID 128
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
R V+REEG+ A+ H+ LF+E SAK E V+ F++L+ KI++ P L + +
Sbjct: 129 M-PNRVVSREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLWDNDRPTFR 187
Query: 191 NQILKQKEVQESARGGNCC 209
L Q A GG+ C
Sbjct: 188 ---LGQ---STDASGGSLC 200
>gi|241068895|ref|XP_002408522.1| RAB-18, putative [Ixodes scapularis]
gi|215492508|gb|EEC02149.1| RAB-18, putative [Ixodes scapularis]
Length = 201
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 120/174 (68%), Gaps = 4/174 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+S VGKSS+LL ++ V DPS TIGVDFK+K +TV G + KL IWDTAG
Sbjct: 9 TLKILIIGESNVGKSSLLLRF-TDDVFDPSLAATIGVDFKVKTVTVDGNKAKLAIWDTAG 67
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
ERF TLT SYYRGA G ILVYDV+ TF L W E+E Y T + VK+LVGNK+D
Sbjct: 68 SERFRTLTPSYYRGAQGAILVYDVSNHNTFLKLDH-WLAELETYCTRSNVVKMLVGNKID 126
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
R R V++E+GM A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 127 RHESRVVSKEQGMNYARKHSMLFIEASAKTKDGVQCAFEELVEKIIQTPGLWEN 180
>gi|328870650|gb|EGG19023.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 201
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 129/197 (65%), Gaps = 7/197 (3%)
Query: 14 FKILLIGDSGVGKSSILLSLISNSVHDPSP--TIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+KILLIGDS VGK+SI+ S+ + D TIGV++K+K L V K + IWDTAGQ
Sbjct: 8 YKILLIGDSDVGKTSIV-KRFSDDIFDEDLLCTIGVEYKVKTLKVDDKEVTFNIWDTAGQ 66
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
E+F L SSYYRGAHGIIL YDVT+RETF NL W E+E +ST + VK+LVGNK+D+
Sbjct: 67 EKFRALISSYYRGAHGIILTYDVTKRETFKNL-QYWLNEIETFSTRSNVVKLLVGNKIDK 125
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVKN 191
++ R VTREEG+ A+ LF+ECSAK ++Q F++L +KILE P E+ K+
Sbjct: 126 EN-REVTREEGLEFARSKAMLFIECSAKTKVGIQQAFEELAHKILETPD--EEPQKKKKS 182
Query: 192 QILKQKEVQESARGGNC 208
L Q + Q+ C
Sbjct: 183 TNLVQPDEQDQNMDSYC 199
>gi|328861035|gb|EGG10139.1| hypothetical protein MELLADRAFT_71064 [Melampsora larici-populina
98AG31]
Length = 228
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 128/186 (68%), Gaps = 5/186 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISN---SVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+ K+LLIG S VGKSS+LL S + S TIGVDFK+KL++ GKR KL+IWDTA
Sbjct: 22 TLKLLLIGSSSVGKSSLLLRFTDEVFLSAEEASATIGVDFKVKLMSRRGKRYKLSIWDTA 81
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYS-TNQDCVKILVGNK 128
GQERF TLTSSYYRGA G++LVYDVT RE+F +L S W E++ ++ + +D V+I+VGNK
Sbjct: 82 GQERFRTLTSSYYRGAQGVVLVYDVTSRESFESLPS-WFSELDTFTHSPRDVVRIVVGNK 140
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D+D R V+ EEG A ++ LF+E SAK V++ F+ ++ KI++ PSL +G +
Sbjct: 141 TDKDYSREVSIEEGRAFAADNNALFVETSAKTMRGVEEVFEAVVDKIIDTPSLHNKGLNL 200
Query: 189 VKNQIL 194
N L
Sbjct: 201 RSNNRL 206
>gi|427787123|gb|JAA59013.1| Putative rab18a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 201
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 131/199 (65%), Gaps = 10/199 (5%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+S VGKSS+LL ++ V DP + TIGVDFK+K LTV G + KL IWDTAG
Sbjct: 9 TLKILIIGESNVGKSSLLLRF-TDDVFDPNLAATIGVDFKVKTLTVDGNKAKLAIWDTAG 67
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
ERF TLT SYYRGA G ILVYDV TF L W E+E Y T + VK+LVGNK+D
Sbjct: 68 SERFRTLTPSYYRGAQGAILVYDVCNYSTFQKLDH-WLAELETYCTRNNVVKMLVGNKID 126
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+ R VT+E+GM A++H LF+E SAK + V+ F++L+ KI++ P L E ++
Sbjct: 127 KHENRVVTKEQGMNYARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWEN----LR 182
Query: 191 NQILKQKEVQESARGGNCC 209
++ E ++++ G+ C
Sbjct: 183 TDAIRLSE--QASKAGSWC 199
>gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502]
gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium parvum]
gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis]
Length = 203
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 136/208 (65%), Gaps = 10/208 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ +++ K +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT R++F N+ W +E++ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAM-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDL---LYKILEVPSLL 182
GNK D S+R VT +EG LA H F+E SAKN +V+Q F + + K ++V S
Sbjct: 120 GNKCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQVNSQN 179
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCCS 210
+GSA ++ + + R G CCS
Sbjct: 180 TRGSAQQGPKLAGAQPI----RQGGCCS 203
>gi|443683130|gb|ELT87498.1| hypothetical protein CAPTEDRAFT_21334 [Capitella teleta]
gi|443728770|gb|ELU14963.1| hypothetical protein CAPTEDRAFT_21450 [Capitella teleta]
Length = 204
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 122/173 (70%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ K+L+IG++GVGKSS+LL ++ DP S TIGVDFK+K + V G R KL IWDTAG
Sbjct: 9 TLKLLIIGETGVGKSSLLLRF-TDDTFDPEQSATIGVDFKVKTIQVDGNRAKLAIWDTAG 67
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G ILVYDV + +F L + W E+E +ST D VK+LVGNK+D
Sbjct: 68 QERFRTLTPSYYRGAQGCILVYDVCSQASFAKLDN-WLNELETFSTKHDIVKMLVGNKID 126
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++ R V+REEG+ A+ + LF+E SAK E V+ F++L+ KIL+ P L E
Sbjct: 127 KEP-REVSREEGLKFARRYHMLFIEASAKTKEGVQCAFEELVEKILQTPGLWE 178
>gi|209881799|ref|XP_002142337.1| Ras small GTPase RIC1/ypt1 protein [Cryptosporidium muris RN66]
gi|209557943|gb|EEA07988.1| Ras small GTPase RIC1/ypt1 protein, putative [Cryptosporidium muris
RN66]
Length = 203
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 133/205 (64%), Gaps = 4/205 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ +T+ K +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTITLENKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT R++F N+ W +E++ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAM-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D S+R VT +EG LA + F+E SAKN +V+Q F + +I + L Q
Sbjct: 120 GNKCDLVSKRVVTSDEGKELADSYGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQLNNQN 179
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+ V Q K Q +GG CC+
Sbjct: 180 TKGVTQQGPKLAGAQPIRQGG-CCA 203
>gi|403358406|gb|EJY78849.1| RAS small GTpases RIC1/ypt1, putative [Oxytricha trifallax]
Length = 208
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 139/212 (65%), Gaps = 14/212 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIG+SGVGKSS+LL + D PTIGVDFKI+ + V GK +KL I
Sbjct: 2 NPEYDYLFKVLLIGNSGVGKSSLLLRFADDVFTDNFMPTIGVDFKIRTIEVDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYY+GAHGII+ YD+T RE+F+ + + W EVE ++++ + +ILV
Sbjct: 62 WDTAGQERFKTITSSYYKGAHGIIVTYDITDRESFSAIEN-WMNEVEKHASD-NISRILV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE-- 183
GNK D + R V+ +EG LA+ + FLE SAK+ ++V++ F + +I ++ +
Sbjct: 120 GNKSDMEDARQVSTDEGKELAEHYNVRFLETSAKDCKNVEEAFTMMTREIKSRVAITQPK 179
Query: 184 ------QGSAVVKNQILKQKEVQESARGGNCC 209
Q + KNQ + K++QE + G CC
Sbjct: 180 KATEQTQAQRINKNQ-HQTKKIQE--KKGGCC 208
>gi|308477314|ref|XP_003100871.1| CRE-RAB-18 protein [Caenorhabditis remanei]
gi|308264445|gb|EFP08398.1| CRE-RAB-18 protein [Caenorhabditis remanei]
Length = 202
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 123/180 (68%), Gaps = 5/180 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS++L + + V DP + TIGVDF++ + + G R+KL IWDTAG
Sbjct: 11 TLKILIIGESGVGKSSLMLRFVDD-VFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAG 69
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+I VYDVT R +F L+ W EV+ Y TN + +K++V NK+D
Sbjct: 70 QERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNH-WMTEVDTYCTNDNIIKMMVANKID 128
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
R V+REEG+ A+ H+ LF+E SAK E V+ F++L+ KI++ P L + +
Sbjct: 129 M-PNRVVSREEGLKFAKRHRTLFIEASAKTREGVQCTFEELIEKIIQTPDLWDNDRPTFR 187
>gi|325303040|tpg|DAA34577.1| TPA_exp: GTPase Rab18 [Amblyomma variegatum]
Length = 201
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 119/174 (68%), Gaps = 4/174 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+S VGKSS+LL ++ V DP + TIGVDFK+K LTV G + KL IWDTAG
Sbjct: 9 TLKILIIGESNVGKSSLLLRF-TDDVFDPNLAATIGVDFKVKTLTVDGNKAKLAIWDTAG 67
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
ERF TLT SYYRGA G ILVYDV TF L W E+E Y T + VK+LVGNK+D
Sbjct: 68 SERFRTLTPSYYRGAQGAILVYDVCNHSTFQKLDH-WLAELETYCTRNNVVKMLVGNKID 126
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
+ R VT+E+GM A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 127 KLENREVTKEQGMNYARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWEN 180
>gi|464565|sp|Q05976.1|RB18A_LYMST RecName: Full=Ras-related protein Rab-18A
gi|288936|emb|CAA51235.1| RAB18a [Lymnaea stagnalis]
Length = 202
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 121/169 (71%), Gaps = 5/169 (2%)
Query: 20 GDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAGQERFGTL 77
G+SGVGKSS+LL ++ DP + TIGVDFK+K LTV G + KL IWDTAGQERF TL
Sbjct: 16 GESGVGKSSLLLRFTEDTF-DPEQAATIGVDFKVKTLTVEGNKTKLAIWDTAGQERFRTL 74
Query: 78 TSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAV 137
T SYYRGA G+ILVYDV+ +++F L + W E+E +ST D VK+LVGNK+DR + V
Sbjct: 75 TPSYYRGAQGVILVYDVSSKQSFNKLDA-WLNELETFSTKHDMVKMLVGNKIDR-ANHEV 132
Query: 138 TREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
T++EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E S
Sbjct: 133 TKDEGLKFARKHHMLFIEASAKTNDGVQCAFEELVEKIIQTPGLWETSS 181
>gi|406695666|gb|EKC98968.1| putative Ras-related protein Rab-18 [Trichosporon asahii var.
asahii CBS 8904]
Length = 222
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 131/209 (62%), Gaps = 21/209 (10%)
Query: 13 SFKILLIGDSGVGKSSILLSLISN---SVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+ K+LLIG+S VGKSS+LL + S + + TIGVDFK+K + V G+R KL+IWDTA
Sbjct: 12 NLKLLLIGNSSVGKSSLLLRFTDDDFLSEEETAATIGVDFKVKSVEVDGRRYKLSIWDTA 71
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA G+ILVYDV++R TF L W +E+E Y +D VKI+VGNKV
Sbjct: 72 GQERFRTLTSSYYRGAQGVILVYDVSQRNTFDELIK-WFREIETYCA-EDVVKIIVGNKV 129
Query: 130 DR-------------DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL 176
D+ + R VT EEG A LF+ECSAK V F++L+ +IL
Sbjct: 130 DKVTLVAMRRADESQEFTRQVTTEEGQAFADRMGTLFMECSAKTRVGVNDAFQELVRRIL 189
Query: 177 EVPSLLEQGSAVVKNQILKQKEVQESARG 205
E PSL +G V+ + ++QE A G
Sbjct: 190 ETPSLWTRGPQPVRTPNV---QLQEDAPG 215
>gi|66804573|ref|XP_636019.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74896885|sp|Q54GY8.1|RAB18_DICDI RecName: Full=Ras-related protein Rab-18
gi|60464366|gb|EAL62514.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 123/170 (72%), Gaps = 3/170 (1%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSV-HDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
D +K+LLIGDS VGK+SI+ ++ D TIGV+FK+K + V GK++ L IWDTA
Sbjct: 4 DKQYKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWDTA 63
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQE+F L SSYYRGAHGIIL YDVT+RE+F NL + W EVE ++ + VK+LVGNK+
Sbjct: 64 GQEKFRALISSYYRGAHGIILTYDVTKRESFDNL-NYWLNEVENFANRSNLVKLLVGNKI 122
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVP 179
D+++ R VTREEG A++ LF+ECSAK+ ++Q F++L KI+E+P
Sbjct: 123 DKEN-REVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIP 171
>gi|351712339|gb|EHB15258.1| Ras-related protein Rab-18 [Heterocephalus glaber]
Length = 205
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/198 (48%), Positives = 136/198 (68%), Gaps = 9/198 (4%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+++ R V R EG+ A++H LF+ +AK + V+ F++L+ KI++ P L E + +
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFI-GNAKTCDGVQCAFEELVEKIIQTPGLWESEN---Q 180
Query: 191 NQILKQKEVQESARGGNC 208
N+ ++ +++S G C
Sbjct: 181 NKGVRLSHMEDSHGRGAC 198
>gi|328770926|gb|EGF80967.1| hypothetical protein BATDEDRAFT_11061 [Batrachochytrium
dendrobatidis JAM81]
Length = 227
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 128/189 (67%), Gaps = 7/189 (3%)
Query: 2 GSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDP---SPTIGVDFKIKLLTVGG 58
G+ V + +FK+LLIGDSG GKSS+LL + P S TIGVDFK+K++ +
Sbjct: 14 GTTVSDRDIVSTFKLLLIGDSGTGKSSLLLQFTDDLWLQPDEVSATIGVDFKVKVIDIDS 73
Query: 59 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELY-STN 117
K+ KLTIWDTAGQERF TLTSSYYRGA G+ILVYDV+ R +F +L + W E++ Y S+N
Sbjct: 74 KKYKLTIWDTAGQERFRTLTSSYYRGAQGVILVYDVSNRGSFDHLQT-WFNELDTYTSSN 132
Query: 118 QDCVKILVGNKVDRDSE--RAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
VKI+VGNK D+D R V R+EG A++ LF+E SAK T V+ F +++ +I
Sbjct: 133 NSVVKIIVGNKSDKDVSGGREVPRKEGEAFAKKMGTLFIETSAKTTMGVRDAFVEVVRRI 192
Query: 176 LEVPSLLEQ 184
++ PSL ++
Sbjct: 193 IDTPSLWQR 201
>gi|170036368|ref|XP_001846036.1| GTP-binding protein yptV3 [Culex quinquefasciatus]
gi|167879008|gb|EDS42391.1| GTP-binding protein yptV3 [Culex quinquefasciatus]
Length = 200
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 123/173 (71%), Gaps = 3/173 (1%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+FKIL+IG+SGVGKSS++L + D + TIGVDFK K++ + ++KL IWDTAGQ
Sbjct: 9 TFKILIIGESGVGKSSLMLRFTEDDFDKDQALTIGVDFKTKIVEIDNVKVKLAIWDTAGQ 68
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TLT SYYR A G ILVYDVT+++TF L S W E+E+Y T + K++VGNK+D
Sbjct: 69 ERFRTLTPSYYRDAQGAILVYDVTKKDTFQKLES-WLNELEIYGTRNNMAKMIVGNKID- 126
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
++R +TR++G A++H+ +F+E SA+ E V+ F++++ KI+E L E+
Sbjct: 127 STDRTITRDDGFRFAKKHRTMFIETSARTNEGVRDAFEEVVRKIMETDGLWER 179
>gi|343172006|gb|AEL98707.1| Ras-like protein, partial [Silene latifolia]
Length = 110
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 81/108 (75%), Positives = 95/108 (87%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DY FK+L+IGDSGVGKSS+LLS S++ D SPTIGVDFK+K + +GGK+LKL IWDTA
Sbjct: 3 FDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLSPTIGVDFKVKYVNMGGKKLKLAIWDTA 62
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTN 117
GQERF TLTSSYYRGA GII+VYDVTRR+TFTNL VWAKE++LYSTN
Sbjct: 63 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLRDVWAKEIDLYSTN 110
>gi|294949450|ref|XP_002786203.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239900360|gb|EER17999.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 205
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 134/209 (64%), Gaps = 11/209 (5%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT RE+F N+ W +E++ Y+T ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKH-WVQEIDKYAT-ENVSKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSL 181
GNK D S++ VT +EG LA + FLE SAKN+ +V+Q F ++ ++ P
Sbjct: 120 GNKTDLTSKKVVTYDEGKELADQLGVPFLETSAKNSHNVEQAFIEMSSEIKSRVKTAPQP 179
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCCS 210
G+ + L+ + + G CCS
Sbjct: 180 NRSGAGAAR---LRPGQPAHGNQSG-CCS 204
>gi|91082425|ref|XP_970378.1| PREDICTED: similar to RAB18, member RAS oncogene family [Tribolium
castaneum]
gi|270007517|gb|EFA03965.1| hypothetical protein TcasGA2_TC014110 [Tribolium castaneum]
Length = 204
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 120/172 (69%), Gaps = 3/172 (1%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+ KIL+IG+SGVGKSSIL+ ++ D + TIGVDFK K LTV +KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSILVRFTEDNFDPDQTLTIGVDFKTKKLTVDDNTVKLAIWDTAGQ 67
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TLT SYYR A G ILVYDVT TF L + W E+E YST + VK++VGNK+D+
Sbjct: 68 ERFRTLTPSYYRDAQGAILVYDVTNYSTFAKLET-WLNELETYSTKANIVKMIVGNKIDK 126
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++ R V REE M A+ H+ L++E SAK + V+ F++L++KI++ P L E
Sbjct: 127 EN-REVNREEAMKFARRHQTLYIEASAKTRDGVQCAFEELVHKIIQTPGLWE 177
>gi|343172008|gb|AEL98708.1| Ras-like protein, partial [Silene latifolia]
Length = 110
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 81/108 (75%), Positives = 95/108 (87%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+DY FK+L+IGDSGVGKSS+LLS S++ D SPTIGVDFK+K + +GGK+LKL IWDTA
Sbjct: 3 FDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLSPTIGVDFKVKYVNMGGKKLKLAIWDTA 62
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTN 117
GQERF TLTSSYYRGA GII+VYDVTRR+TFTNL VWAKE++LYSTN
Sbjct: 63 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLRGVWAKEIDLYSTN 110
>gi|196001837|ref|XP_002110786.1| hypothetical protein TRIADDRAFT_49948 [Trichoplax adhaerens]
gi|190586737|gb|EDV26790.1| hypothetical protein TRIADDRAFT_49948 [Trichoplax adhaerens]
Length = 205
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 129/198 (65%), Gaps = 8/198 (4%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG++GVGKSS+LL + DP S TIGVDFKIK + V G R+KL IWDTAG
Sbjct: 7 TLKILIIGEAGVGKSSLLLRFTDDQ-FDPEQSATIGVDFKIKTVNVEGNRVKLAIWDTAG 65
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYD ++R +F L + W E+ Y T +D +K+LVGNK+D
Sbjct: 66 QERFRTLTPSYYRGAQGVILVYDTSKRTSFDKLEN-WLTELRTYCTKRDVIKMLVGNKID 124
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+D +R V G A+ ++ LF ECSAK + V+ F +L++KI++ P L + +
Sbjct: 125 KD-QREVDTLTGTNFARRYQMLFTECSAKTCDHVQDAFDELVHKIIQTPGLWDTEKS--- 180
Query: 191 NQILKQKEVQESARGGNC 208
N LK E A+ +C
Sbjct: 181 NSGLKIGERDGEAKASSC 198
>gi|156095590|ref|XP_001613830.1| small GTPase Rab1A [Plasmodium vivax Sal-1]
gi|148802704|gb|EDL44103.1| small GTPase Rab1A, putative [Plasmodium vivax]
Length = 200
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 133/204 (65%), Gaps = 6/204 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N+SYD FKILLIGDSGVGKS +LL ++ D TIGVDFKIK + + K +KL I
Sbjct: 2 NDSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGA GII+VYDVT R++F N+ + W E+E Y++ +D K+L+
Sbjct: 62 WDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKN-WIIEIEKYAS-EDVQKVLI 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK+D ++R V+ EEG LA FLE SAK +V+Q FK + ++I L Q
Sbjct: 120 GNKIDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHEIKNKSQLENQQ 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
V N L K ++++ + CC
Sbjct: 180 KGRV-NINLNAKPIKDNKK--KCC 200
>gi|124506171|ref|XP_001351683.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
gi|13375179|emb|CAC34553.1| putative GTPase [Plasmodium falciparum 3D7]
gi|23504611|emb|CAD51490.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
Length = 200
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N+SYD FKILLIGDSGVGKS +LL ++ D TIGVDFKIK + + K +KL I
Sbjct: 2 NDSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGA GII+VYDVT R++F N+ + W E+E Y++ +D KIL+
Sbjct: 62 WDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKN-WIIEIEKYAS-EDVQKILI 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK+D ++R V+ EEG LA FLE SAK +V+Q FK + Y+I
Sbjct: 120 GNKIDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAYEI 169
>gi|156402311|ref|XP_001639534.1| predicted protein [Nematostella vectensis]
gi|156226663|gb|EDO47471.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 134/206 (65%), Gaps = 8/206 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ SYDY FK+LLIGDSGVGK+ IL ++ + TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKSYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIEMQGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T+ +TF N+S W + +E ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNISK-WLRNIEEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++GNK D D R V+RE G +A+EH FLE SAK +++Q F+ L IL+ L
Sbjct: 119 ILGNKCDMDDRRIVSRERGEQIAREHGIRFLETSAKTNINIEQAFQYLAQDILKKE--LN 176
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ S N I Q+ +GG CC
Sbjct: 177 KDSEEPSNNI--HVHDQKDKKGG-CC 199
>gi|221057099|ref|XP_002259687.1| GTPase [Plasmodium knowlesi strain H]
gi|193809759|emb|CAQ40461.1| GTPase, putative [Plasmodium knowlesi strain H]
Length = 200
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 134/204 (65%), Gaps = 6/204 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N+SYD FKILLIGDSGVGKS +LL ++ D TIGVDFKIK + + K +KL I
Sbjct: 2 NDSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGA GII+VYDVT R++F N+ + W E+E Y++ +D KIL+
Sbjct: 62 WDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKN-WIIEIEKYAS-EDVQKILI 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK+D ++R V+ EEG LA FLE SAK +V+Q FK + ++I + S LE
Sbjct: 120 GNKIDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHEI-KNKSQLENQ 178
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
N L K ++++ + CC
Sbjct: 179 QKGRANINLNAKPIKDNRK--KCC 200
>gi|401885802|gb|EJT49887.1| putative Ras-related protein Rab-18 [Trichosporon asahii var.
asahii CBS 2479]
Length = 222
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 129/209 (61%), Gaps = 21/209 (10%)
Query: 13 SFKILLIGDSGVGKSSILLSLISN---SVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+ K+LLIG+S VGKSS+LL + S + + TIGVDFK+K + V G+R KL+IWDTA
Sbjct: 12 NLKLLLIGNSSVGKSSLLLRFTDDDFLSEEETAATIGVDFKVKSVEVDGRRYKLSIWDTA 71
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGA G+ILVYDVT+R TF L W +E++ Y +D VKI+VGNKV
Sbjct: 72 GQERFRTLTSSYYRGAQGVILVYDVTQRNTFDELIK-WFREIDTYCA-EDVVKIIVGNKV 129
Query: 130 DR-------------DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL 176
D+ + R VT EEG A LF+ECSAK V F+ L+ +IL
Sbjct: 130 DKVTLVAIRRADESQEFTRQVTTEEGQAFADRMGTLFMECSAKTRVGVNDAFQVLVRRIL 189
Query: 177 EVPSLLEQGSAVVKNQILKQKEVQESARG 205
E PSL +G V+ ++QE A G
Sbjct: 190 ETPSLWTRGPQPVRT---PNVQLQEDAPG 215
>gi|126326099|ref|XP_001363346.1| PREDICTED: ras-related protein Rab-18-like [Monodelphis domestica]
Length = 208
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 129/199 (64%), Gaps = 10/199 (5%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL I++ DP S TIGVDFK+K ++ G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLR-ITDDTFDPNISATIGVDFKVKTISFDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT +YYRGA G+ILVYDVTRR+TF L + W E+ + D K+LVGNK+D
Sbjct: 67 QERFRTLTPNYYRGAQGVILVYDVTRRDTFVKLDN-WLIELNTHCMGNDITKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+++ V R EG+ A++H LF+E SAK + V+ F++L+ KI + P + E +K
Sbjct: 126 KENHE-VDRNEGLKFARKHSMLFIEVSAKTCDGVRCAFEELVEKIFQTPGVWE-----IK 179
Query: 191 NQILKQKEVQESARGGNCC 209
NQ + Q G C
Sbjct: 180 NQKKGVRLSQNEESPGRVC 198
>gi|326430486|gb|EGD76056.1| GTP-binding protein yptV3 [Salpingoeca sp. ATCC 50818]
Length = 199
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 123/178 (69%), Gaps = 5/178 (2%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
D KIL+IGDS GKS +L+ ++ + PTIGVDFK K+LT+ G+++KLT+WDTA
Sbjct: 5 DAELKILIIGDSNCGKSCLLMRFTDDTFDEHMGPTIGVDFKNKMLTLNGQQVKLTVWDTA 64
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQ+RF TLT+SYYRGAHG+ILVYDVTRR TF ++ W E +Y + + VK+LV NK+
Sbjct: 65 GQDRFKTLTASYYRGAHGVILVYDVTRRATFEHIIP-WLNEANVYC-DDNVVKMLVANKI 122
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
D R V+ +EG LA+E LF+ECSAK V+Q F++L ++L+ P L + S+
Sbjct: 123 DE--PRQVSTDEGRALAREKNMLFIECSAKTKVGVQQAFEELAQQVLDTPELYQSPSS 178
>gi|353239644|emb|CCA71547.1| probable Ras-related protein Rab-18 [Piriformospora indica DSM
11827]
Length = 218
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 120/172 (69%), Gaps = 5/172 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSV---HDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+ K+LLIG+S VGKSS+L+ + S TIGVDF++ + +GG+R+KL+IWDTA
Sbjct: 9 NLKLLLIGNSSVGKSSLLMRFTDAQFLPEDESSATIGVDFRVCKMEIGGRRVKLSIWDTA 68
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGA GII+ YD++ RETF L W E++ Y T VK+LVGNK+
Sbjct: 69 GQERFRTITSSYYRGAQGIIVAYDISNRETFDALPR-WFTELDTYVT-PSVVKMLVGNKL 126
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL 181
D++ RAV+ +EG AQ + CLFLE SAK V++ F++L+ KIL+ P L
Sbjct: 127 DKEFSRAVSEDEGRKFAQRNGCLFLEASAKTNVGVREAFQELVEKILDTPEL 178
>gi|294883408|ref|XP_002770925.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239874051|gb|EER02741.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 211
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 120/166 (72%), Gaps = 3/166 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 7 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 66
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT RE+F N+ W +E++ Y+T ++ K+LV
Sbjct: 67 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKH-WVQEIDKYAT-ENVSKLLV 124
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDL 171
GNK D S++ VT +EG LA + FLE SAKN+ +V+Q F ++
Sbjct: 125 GNKSDLTSKKVVTYDEGKELADQLGISFLETSAKNSHNVEQAFIEM 170
>gi|391341575|ref|XP_003745104.1| PREDICTED: ras-related protein Rab-18-like [Metaseiulus
occidentalis]
Length = 203
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 124/170 (72%), Gaps = 2/170 (1%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+ K+L+IG++ VGKS +LL + ++ + TIG D K K++TV ++KL++WDTAG
Sbjct: 7 TLKVLIIGEADVGKSCLLLRFVEDTFDTQLTSTIGFDHKSKVITVFDNKVKLSLWDTAGS 66
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TLT+SYYRGA G +LVYDVT RE+F L S W E+E Y+T+++ VK+LVGNKVD+
Sbjct: 67 ERFRTLTASYYRGAQGAVLVYDVTCRESFEKLDS-WLIELETYATHKNIVKMLVGNKVDK 125
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL 181
+R VT++EG+ A+ H+ LF+E SA+ +E+V CF++L+ KIL P L
Sbjct: 126 HEQRQVTKQEGISYARRHQMLFVEASARTSENVTGCFEELVAKILHTPGL 175
>gi|332372776|gb|AEE61530.1| unknown [Dendroctonus ponderosae]
Length = 204
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 119/177 (67%), Gaps = 5/177 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDPSPT--IGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP T IGVDFK K L V G +KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTEDNF-DPEQTLTIGVDFKTKKLNVEGNTVKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYR A G ILV+DV + TF L + W E+E YST + VK+++GNK+D
Sbjct: 67 QERFRTLTPSYYRDAQGAILVFDVGSQATFAKLET-WLNELETYSTKNNIVKMIIGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
D R V+RE+ M A+ H+ L++E SAK V+ F++L++KI++ P L E A
Sbjct: 126 VD-HREVSREQAMAFARRHQTLYIEASAKTKHGVQAAFEELVHKIIQTPGLWESYDA 181
>gi|159795493|pdb|2RHD|A Chain A, Crystal Structure Of Cryptosporidium Parvum Small Gtpase
Rab1a
Length = 175
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 117/166 (70%), Gaps = 3/166 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ +++ K +KL I
Sbjct: 3 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQI 62
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT R++F N+ W +E++ Y+ ++ K+LV
Sbjct: 63 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAM-ENVNKLLV 120
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDL 171
GNK D S+R VT +EG LA H F+E SAKN +V+Q F +
Sbjct: 121 GNKCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTM 166
>gi|255634935|gb|ACU17826.1| unknown [Glycine max]
Length = 121
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/107 (81%), Positives = 93/107 (86%), Gaps = 1/107 (0%)
Query: 1 MGSKVGNNS-YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGK 59
M S G +S YD SFKILLIGDS VGKSS+L+S ISNS D +PTIGVDFKIK+LTVGGK
Sbjct: 1 MNSSSGQSSGYDLSFKILLIGDSAVGKSSLLVSFISNSAEDIAPTIGVDFKIKMLTVGGK 60
Query: 60 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSV 106
RLKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRR+TFTNLS V
Sbjct: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSEV 107
>gi|358253006|dbj|GAA51290.1| Ras-related protein Rab-18 [Clonorchis sinensis]
Length = 215
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 131/201 (65%), Gaps = 6/201 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVG-GKRLKLTIWDTAG 70
+FK+L+IGDSGVGKSS+LL I++S S TIGVD+++K+ TV G +KL+IWDTAG
Sbjct: 16 NFKLLVIGDSGVGKSSLLLRYINDSFEARVSATIGVDYRVKVTTVPDGTMIKLSIWDTAG 75
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT ++YRGAHG I+VYDV+ R +F LS+ W +E++ +S++ D V++LVGNK+D
Sbjct: 76 QERFRTLTPNFYRGAHGAIIVYDVSNRGSFDRLSN-WMEELKTFSSHHDMVRMLVGNKID 134
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
R VTREEG+ A+ + E SAK +E V F DL+ +I +P L + S
Sbjct: 135 H-IPRQVTREEGLRYARMFNMPYAETSAKTSEGVNSVFSDLVQRIYTIPHLWDPDSRHRP 193
Query: 191 NQILKQKEVQ--ESARGGNCC 209
+Q + R GN C
Sbjct: 194 GMRHASSRLQLNHNRRSGNGC 214
>gi|242020978|ref|XP_002430924.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212516142|gb|EEB18186.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 206
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 130/198 (65%), Gaps = 4/198 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDPSP-TIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+ KIL+IG+SGVGKSS+LL I + P TIGVDFK K +TV G R+KL +WDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFIDDKFDPDQPLTIGVDFKTKEMTVDGNRVKLALWDTAGQ 67
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TL SYYR AHG ILVYDV+ TF + W E+++Y+T + +KI+VGNK+D
Sbjct: 68 ERFRTLIPSYYRDAHGAILVYDVSNYITFRKIED-WLNELDVYATKPNLIKIIVGNKIDL 126
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK- 190
+ +R VT+EEG+ LA+ H LF+E S K + V+ ++L+ KI++ P L + S ++
Sbjct: 127 E-KREVTKEEGIKLAKRHATLFIESSVKTKDGVQTAMQELVQKIIQTPGLWDPISHNLRL 185
Query: 191 NQILKQKEVQESARGGNC 208
+Q + E + + G C
Sbjct: 186 DQNHYEPEYKYNCSGYRC 203
>gi|393244988|gb|EJD52499.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 228
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 123/192 (64%), Gaps = 12/192 (6%)
Query: 15 KILLIGDSGVGKSSILLSLISN---SVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
K+L+IG+S VGKSS+LL + S TIGVDF++ + V GK++KL+IWDTAGQ
Sbjct: 17 KLLIIGNSSVGKSSLLLRFTDEQWLPEDESSATIGVDFRVCKMEVKGKKVKLSIWDTAGQ 76
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF T+TSSYYRGA GI LVYDV+ RE+F L W E+E Y + VK+LVGNK+D+
Sbjct: 77 ERFRTITSSYYRGAQGIFLVYDVSNRESFDALPR-WFSELETY-VSSSVVKMLVGNKLDK 134
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG------ 185
+ R V+REEG A CLF+E SAK +V++ F +++ KIL+ P L + G
Sbjct: 135 EFSRTVSREEGQKFADRMGCLFVESSAKTAANVREAFVEMVEKILDTPELWQPGGGARVG 194
Query: 186 -SAVVKNQILKQ 196
SA NQ Q
Sbjct: 195 ASAAAGNQTQSQ 206
>gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta vulgaris]
Length = 202
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 126/205 (61%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S V TIGVDFKI+ + GK +KL I
Sbjct: 2 NQDYDYLFKLLLIGDSGVGKSCLLLRFADDSYVESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +++F N+ W E++ Y+++ + VKILV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQQSFDNVKQ-WLNEIDRYASD-NVVKILV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D S + V+ E A E FLE SAKN+ +V+Q F + +I + + Q
Sbjct: 120 GNKSDLTSNKVVSSETAKAFADEIGIPFLETSAKNSTNVEQAFMTMAAEIKK--RVASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
++ + NCCS
Sbjct: 178 ASNATRPTTVPXRXXXXXQKSNCCS 202
>gi|156390266|ref|XP_001635192.1| predicted protein [Nematostella vectensis]
gi|156222283|gb|EDO43129.1| predicted protein [Nematostella vectensis]
Length = 204
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 113/160 (70%), Gaps = 3/160 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FKILLIGDSGVGKS +LL + +S + TIGVDFKIK + V GK +KL IWDT
Sbjct: 13 YDYLFKILLIGDSGVGKSCLLLRFVDDSHRESYQTTIGVDFKIKTMRVDGKVVKLQIWDT 72
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHG+++VYD+T+RE++ NL W EVE Y++ + ILVGNK
Sbjct: 73 AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHK-WLMEVETYAS-EGVHMILVGNK 130
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
+D D++R V + A H F+E SAK ++VK+ F
Sbjct: 131 IDLDTDREVQPDAAQEWAALHDMPFVETSAKGAKNVKEAF 170
>gi|56753826|gb|AAW25110.1| SJCHGC06157 protein [Schistosoma japonicum]
Length = 211
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 129/203 (63%), Gaps = 7/203 (3%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVG-GKRLKLTIWDTAG 70
+FK+LLIGDSGVGKSS+L+ ++ S TIGVDFK+KL+TV G ++KL+IWDTAG
Sbjct: 11 NFKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKLVTVPDGTKIKLSIWDTAG 70
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT + YRG+H + VYDV RE+F NL +W +E++ YS N + +K+LVGNK+D
Sbjct: 71 QERFRTLTPNVYRGSHAAVFVYDVANRESFDNL-KIWMEELKTYSDNPNMIKLLVGNKID 129
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA-VV 189
R ++REEG+ A+ + + E SAK +E V Q F D++ KI L QG +
Sbjct: 130 -SVPRLISREEGLRFARLYNMPYAETSAKTSEGVNQLFSDIVTKIFNHSELWNQGKKRAL 188
Query: 190 KNQILKQK--EVQESARGGNCCS 210
N+ + QE CCS
Sbjct: 189 SNESNRANLTSSQEMQSHSGCCS 211
>gi|237843001|ref|XP_002370798.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|211968462|gb|EEB03658.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|221502504|gb|EEE28231.1| Rab family protein [Toxoplasma gondii VEG]
Length = 202
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 126/201 (62%), Gaps = 4/201 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT RE+F N+ + W E++ Y+ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKN-WMMEIDKYAM-EGVSKLLVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D S+R VT EEG A F+E SAKN +V+Q F + +I + +Q S
Sbjct: 123 CDLTSKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARVQVNQQQSRP 182
Query: 189 VKNQILKQKEVQESARGGNCC 209
N L + S G CC
Sbjct: 183 NANVRLGPSQPVRSVSSG-CC 202
>gi|240849344|ref|NP_001155696.1| RAB18B, member RAS oncogene family-like [Acyrthosiphon pisum]
gi|328718584|ref|XP_003246519.1| PREDICTED: ras-related protein Rab-18-B-like [Acyrthosiphon pisum]
gi|328718586|ref|XP_003246520.1| PREDICTED: ras-related protein Rab-18-B-like [Acyrthosiphon pisum]
gi|239789319|dbj|BAH71290.1| ACYPI007125 [Acyrthosiphon pisum]
Length = 200
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 119/173 (68%), Gaps = 4/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+ KILLIG SGVGKS +L ++ + D + TIGVDFK++ +TV +KL +WDTAGQ
Sbjct: 8 TLKILLIGQSGVGKSCLLCRFTDDTFNVDNAVTIGVDFKMRKITVDNNNIKLALWDTAGQ 67
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TLT +YYR G +LVYDV+ R++FT L + W E+ YST + +K++VGNK+
Sbjct: 68 ERFRTLTPNYYRDGQGAVLVYDVSNRDSFTCLET-WINELNRYSTKTNIIKMVVGNKI-- 124
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
D ER VTREEG+ A+ H+ LF+E SAK E V F++L+ KI+ PSL E+
Sbjct: 125 DMERQVTREEGIAFARRHQTLFIETSAKTKEGVYMAFEELVRKIINTPSLWEK 177
>gi|357135226|ref|XP_003569212.1| PREDICTED: ras-related protein RIC1-like [Brachypodium distachyon]
Length = 203
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 126/205 (61%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D R V+ E G LA E FLE SAK+ +V++ F + +I + Q
Sbjct: 120 GNKCDLAESRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKN--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A Q Q A+ CCS
Sbjct: 178 AANASKPATVQMRGQPVAQQNGCCS 202
>gi|432607|gb|AAB28535.1| ras-related GTP binding protein possessing GTPase activity [Oryza
sativa]
Length = 202
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 126/205 (61%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D R V+ E G LA E FLE SAK+ +V++ F + +I + QG
Sbjct: 120 GNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKN--RMASQG 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
Q Q A+ +CCS
Sbjct: 178 RTNASKPATVQMPRQPVAQQSSCCS 202
>gi|395328454|gb|EJF60846.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 227
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 117/176 (66%), Gaps = 5/176 (2%)
Query: 15 KILLIGDSGVGKSSILLSLISN---SVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
K+LLIG+S VGKSS+LL + S TIGVDF++ + V GK++KL+IWDTAGQ
Sbjct: 15 KLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMDVKGKKVKLSIWDTAGQ 74
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF T+TSSYYRGA GIILVYDV RE+F L W E+E Y + VKI+VGNKVD+
Sbjct: 75 ERFRTITSSYYRGAQGIILVYDVANRESFDALPK-WFSELETY-VSSSVVKIIVGNKVDK 132
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
+ R V+ EG A LF+E SAK V++ F+D++ +I++ P L + G+A
Sbjct: 133 EYSRQVSASEGQAFAARMDALFVEASAKTAVGVQEAFRDVVERIMDTPELWQTGAA 188
>gi|393214870|gb|EJD00362.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 234
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 124/197 (62%), Gaps = 7/197 (3%)
Query: 4 KVGNNSYDYSFKILLIGDSGVGKSSILLSLISN---SVHDPSPTIGVDFKIKLLTVGGKR 60
+ ++S + K+LLIG+S VGKSS+LL + S TIGVDF++ + + GK+
Sbjct: 8 RTTSDSSPINVKLLLIGNSSVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEINGKK 67
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
+KL+IWDTAGQERF T+TSSYYRGA GIILVYDV RE+F L W E+ Y ++
Sbjct: 68 VKLSIWDTAGQERFRTITSSYYRGAQGIILVYDVANRESFAALPR-WYSELGTYVSDS-V 125
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
VKILVGNKVD++ R V EG AQ LF+E SAK V++ F D++ +IL+ P
Sbjct: 126 VKILVGNKVDKEFSRQVPTSEGAAFAQRMGSLFVEASAKTAVGVREAFTDVVERILDTPE 185
Query: 181 LLEQGSAVV--KNQILK 195
L S V +N ILK
Sbjct: 186 LWAPVSNVTPDRNAILK 202
>gi|162458854|ref|NP_001105441.1| GTP-binding protein YPTM2 [Zea mays]
gi|466172|sp|Q05737.1|YPTM2_MAIZE RecName: Full=GTP-binding protein YPTM2
gi|287835|emb|CAA44919.1| yptm2 [Zea mays]
Length = 203
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 124/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + + V E A E F+E SAKN +V+Q F + I + + Q
Sbjct: 120 GNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A Q Q + +CCS
Sbjct: 178 AAANARPATVQIRGQPVNQKTSCCS 202
>gi|356568583|ref|XP_003552490.1| PREDICTED: ras-related protein RABD2a-like [Glycine max]
Length = 202
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 128/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ RAV+ E A E F+E SAK+ +V+Q F + I + + Q
Sbjct: 120 GNKCDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+ + + Q Q A+ G CCS
Sbjct: 178 ANNARPPTV-QIRGQPVAQKGGCCS 201
>gi|56754975|gb|AAW25670.1| SJCHGC06150 protein [Schistosoma japonicum]
gi|226470410|emb|CAX70485.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485751|emb|CAX75295.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485753|emb|CAX75296.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485755|emb|CAX75297.1| Rab-protein 10 [Schistosoma japonicum]
Length = 205
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/193 (47%), Positives = 131/193 (67%), Gaps = 6/193 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
+ SYD FK+LLIGDSGVGK+ +L+ + S + PS TIG+DFKIK + + GK++K
Sbjct: 1 MAKKSYDALFKLLLIGDSGVGKTCLLIRYVDGS-YSPSFISTIGIDFKIKTIELEGKKIK 59
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T+SYYRGA GI+++YD+T R TF N+ + W K + Y++ +D K
Sbjct: 60 LQIWDTAGQERFHTITTSYYRGAMGIMMIYDITNRRTFDNIQT-WMKNICDYAS-EDVEK 117
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL-EVPSL 181
++VGNK D D+ RAV+ EEG A+ H+ FLE SA E+V + F++L IL + P+
Sbjct: 118 LVVGNKCDFDNRRAVSYEEGSEKARLHRIKFLETSAMTGENVNKAFEELTLAILRKTPTR 177
Query: 182 LEQGSAVVKNQIL 194
+ S V ++ L
Sbjct: 178 GHEPSTVTQSHRL 190
>gi|297599697|ref|NP_001047606.2| Os02g0653800 [Oryza sativa Japonica Group]
gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza sativa]
gi|49387522|dbj|BAD24987.1| putative GTP-binding protein YPTM2 [Oryza sativa Japonica Group]
gi|215769313|dbj|BAH01542.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623360|gb|EEE57492.1| hypothetical protein OsJ_07768 [Oryza sativa Japonica Group]
gi|255671140|dbj|BAF09520.2| Os02g0653800 [Oryza sativa Japonica Group]
Length = 203
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 125/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + + V+ E A E F+E SAKN +V+Q F + I + + Q
Sbjct: 120 GNKSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A Q Q + +CCS
Sbjct: 178 AAANARPPTVQIRGQPVNQKTSCCS 202
>gi|242066528|ref|XP_002454553.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|194691170|gb|ACF79669.1| unknown [Zea mays]
gi|219887101|gb|ACL53925.1| unknown [Zea mays]
gi|241934384|gb|EES07529.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|413938047|gb|AFW72598.1| GTP-binding protein YPTM2 isoform 1 [Zea mays]
gi|413938048|gb|AFW72599.1| GTP-binding protein YPTM2 isoform 2 [Zea mays]
Length = 203
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 124/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + + V E A E F+E SAKN +V+Q F + I + + Q
Sbjct: 120 GNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A Q Q + +CCS
Sbjct: 178 AAANARPATVQIRGQPVNQKTSCCS 202
>gi|156555777|ref|XP_001602999.1| PREDICTED: ras-related protein Rab-18-B-like [Nasonia vitripennis]
Length = 223
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 117/179 (65%), Gaps = 3/179 (1%)
Query: 14 FKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDTAGQE 72
KIL+IG++ VGKSSILL + HD T+G+D+K K +T+ G +KL IWDTAGQE
Sbjct: 10 LKILMIGETNVGKSSILLRFTEDEFHDNIQNTVGMDYKSKKVTIDGNTVKLAIWDTAGQE 69
Query: 73 RFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRD 132
RF TLT +YYR G ILVYDVT R TFT L +W E+ Y D VK++VGNK+D
Sbjct: 70 RFRTLTPNYYRDGQGAILVYDVTDRSTFTKL-DMWLNELHTYCNKTDIVKMVVGNKIDL- 127
Query: 133 SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVKN 191
+R VT EEG+ A+ H+ L++E SAK + VK CF++L+ KI++ P L + S N
Sbjct: 128 PDRQVTTEEGLQFARRHQTLYIESSAKTADGVKCCFEELVQKIIQTPGLWDTYSYKTYN 186
>gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis]
gi|116784933|gb|ABK23527.1| unknown [Picea sitchensis]
gi|224284724|gb|ACN40093.1| unknown [Picea sitchensis]
Length = 202
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 129/209 (61%), Gaps = 13/209 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI----LEVPSL 181
GNK D + RAV + A E FLE SAKN +V+Q F + +I P++
Sbjct: 120 GNKCDLTANRAVDYDTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPAM 179
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCCS 210
A V Q+ Q VQ+S CCS
Sbjct: 180 NSSRPATV--QMKGQPVVQKSG----CCS 202
>gi|29841143|gb|AAP06156.1| SJCHGC02833 protein [Schistosoma japonicum]
gi|226468172|emb|CAX76313.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468174|emb|CAX76314.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468176|emb|CAX76315.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468178|emb|CAX76316.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472646|emb|CAX71009.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472648|emb|CAX71010.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472650|emb|CAX71011.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 125/204 (61%), Gaps = 8/204 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +L+ S + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPDYDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGA GII+VYDVT + +F N+ S W +E+E Y+ N ++LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKS-WLQEIEHYA-NSTVNRLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D RAV + M A+EH+ FLE SAK +V+ F ++ +I + ++
Sbjct: 120 GNKCDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTAPMQSM 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
S+ V Q + G CC
Sbjct: 180 SSNV-----TVNSTQPVTKSGGCC 198
>gi|409075969|gb|EKM76344.1| hypothetical protein AGABI1DRAFT_115896 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426192906|gb|EKV42841.1| hypothetical protein AGABI2DRAFT_195613 [Agaricus bisporus var.
bisporus H97]
Length = 220
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 117/176 (66%), Gaps = 5/176 (2%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISN---SVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
S + K+LLIG+S VGKSS+LL + S TIGVDF++ + V GK++KL+I
Sbjct: 8 SQPMNVKLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMEVKGKKIKLSI 67
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGA GIILVYDV+ RETF L W E+E Y + +KILV
Sbjct: 68 WDTAGQERFRTITSSYYRGAQGIILVYDVSNRETFEALPR-WYSELETY-VSSSVIKILV 125
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL 181
GNK+D++ R VT EG A+ LF+E SAK + VK+ F +++ KILE P L
Sbjct: 126 GNKLDKEFSRQVTAAEGQQFAERMGSLFIEASAKTSVGVKEVFTEVVEKILETPEL 181
>gi|374081854|ref|NP_001243339.1| ras-related protein Rab-18 isoform 2 [Homo sapiens]
gi|332240538|ref|XP_003269444.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Nomascus
leucogenys]
gi|332833817|ref|XP_507716.2| PREDICTED: ras-related protein Rab-18 isoform 2 [Pan troglodytes]
gi|397501615|ref|XP_003821476.1| PREDICTED: ras-related protein Rab-18 isoform 3 [Pan paniscus]
gi|51599149|gb|AAU08232.1| RAB18 long isoform 1 [Homo sapiens]
Length = 235
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 125/202 (61%), Gaps = 34/202 (16%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIW---- 66
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IW
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVTLH 66
Query: 67 -------------------------DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFT 101
DTAGQERF TLT SYYRGA G+ILVYDVTRR+TF
Sbjct: 67 QQTANFFLKSQIGNSPILKWAMWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFV 126
Query: 102 NLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNT 161
L + W E+E Y T D V +LVGNK+D+++ R V R EG+ A++H LF+E SAK
Sbjct: 127 KLDN-WLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTC 184
Query: 162 EDVKQCFKDLLYKILEVPSLLE 183
+ V+ F++L+ KI++ P L E
Sbjct: 185 DGVQCAFEELVEKIIQTPGLWE 206
>gi|166235969|gb|ABY85791.1| GTPase Rab1 [Larix kaempferi]
Length = 203
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 129/203 (63%), Gaps = 6/203 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT ++F N+ W E++ Y+++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQ-WLSEIDKYASDS-VSKLLVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQGSA 187
D +R V ++ A E FLE SAK+ +V+Q F + ++ + S L +G+
Sbjct: 123 CDMTEKRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQLTEGNR 182
Query: 188 VVKNQILKQKEVQESARGGNCCS 210
K ++ K RGG+CCS
Sbjct: 183 --KANTIEMKGQPLPQRGGSCCS 203
>gi|426364300|ref|XP_004049256.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Gorilla gorilla
gorilla]
Length = 235
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 125/202 (61%), Gaps = 34/202 (16%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIW---- 66
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IW
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVTLH 66
Query: 67 -------------------------DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFT 101
DTAGQERF TLT SYYRGA G+ILVYDVTRR+TF
Sbjct: 67 QQTANFFLKSQIGNSPILKWAIWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFV 126
Query: 102 NLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNT 161
L + W E+E Y T D V +LVGNK+D+++ R V R EG+ A++H LF+E SAK
Sbjct: 127 KLDN-WLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTC 184
Query: 162 EDVKQCFKDLLYKILEVPSLLE 183
+ V+ F++L+ KI++ P L E
Sbjct: 185 DGVQCAFEELVEKIIQTPGLWE 206
>gi|393220275|gb|EJD05761.1| GTP-binding protein ypt1 [Fomitiporia mediterranea MF3/22]
Length = 202
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 131/204 (64%), Gaps = 11/204 (5%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +T+ N+ W +E++ Y+++ + K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTYKNVKQ-WLQEIDRYASD-NVNKLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
DR +E+ V A++ FLE SAK +V+Q F + +I E G+A
Sbjct: 124 SDRTNEKVVEYAVASEFAKQLGIPFLETSAKTALNVEQAFLTMAREIKE-----RTGTAT 178
Query: 189 VKNQ---ILKQKEVQESARGGNCC 209
N+ + K+ + +S GGNCC
Sbjct: 179 KANKDTVVPKEGQALQSNSGGNCC 202
>gi|388582980|gb|EIM23283.1| hypothetical protein WALSEDRAFT_15609 [Wallemia sebi CBS 633.66]
Length = 202
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 117/177 (66%), Gaps = 16/177 (9%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSV---HDPSPTIGVDFKIKLLTVGGKRLKLTIW--- 66
+FK+LLIG+S VGKSS+LL N D + TIGVDFK+K + + KR KL+IW
Sbjct: 19 AFKLLLIGNSSVGKSSLLLRFTENDFLPEEDANATIGVDFKVKYIQIKDKRYKLSIWCVF 78
Query: 67 --------DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQ 118
+TAGQERF +L SSYYRGA G+ILVYDVT RETF L VW +E++ YST+
Sbjct: 79 ATHTHANFNTAGQERFRSLVSSYYRGAQGVILVYDVTNRETFDKL-RVWFQELDTYSTD- 136
Query: 119 DCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
D VKI+VGNK D + +RAV+ EE LA+ H +F+ECSAK + V F +L K+
Sbjct: 137 DAVKIVVGNKTDVNHQRAVSIEEAKELAELHNAMFVECSAKTSTGVNHLFYELAQKV 193
>gi|403372916|gb|EJY86368.1| Rab A61 [Oxytricha trifallax]
Length = 248
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 90/159 (56%), Positives = 114/159 (71%), Gaps = 3/159 (1%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIG+SGVGKS +LL NS ++ TIGVDFKIK + + + +KL IWDTA
Sbjct: 30 DYLFKLLLIGNSGVGKSCLLLRYAENSFNENFFNTIGVDFKIKTIMLDEQIVKLQIWDTA 89
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TLTSSYYRGAHGII+VYDVT R++F N+ W E+E ++ N KILVGNK
Sbjct: 90 GQERFRTLTSSYYRGAHGIIIVYDVTDRDSFENVRQ-WMHEIERFA-NAGVCKILVGNKC 147
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D + R V+ EEGM LA+ ++ FLE SAKN+ +V+ F
Sbjct: 148 DMEESRKVSHEEGMELAKHYEIPFLETSAKNSINVETSF 186
>gi|300175138|emb|CBK20449.2| unnamed protein product [Blastocystis hominis]
Length = 202
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 130/204 (63%), Gaps = 6/204 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIGDSGVGKS +LL + D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGDSGVGKSCLLLRFADDQYSDCYITTIGVDFKIRTVDLDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT ++F N+ + W E++ Y+ N++ VK+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDLDSFNNVKT-WLHEIDRYA-NENVVKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V+ E A F+E SAKN+ +V+ F + +I++ + ++ G
Sbjct: 120 GNKADLTAKKVVSYETAKEFADSLGIEFVETSAKNSTNVETAFMTMAREIMQKNASVQSG 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
K ++ +ES CC
Sbjct: 180 PKGAKPTVVPSAAKKESK---GCC 200
>gi|340506305|gb|EGR32473.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 211
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 123/184 (66%), Gaps = 8/184 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIG+SGVGKS +L+ N ++ TIGVDFKIK + + GK +KL IWDT
Sbjct: 9 YDYLFKLLLIGNSGVGKSCMLMRFSENQFTNNFYNTIGVDFKIKTIQLNGKNIKLQIWDT 68
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQ+RF T+T SYYRGAHGI +V+D+T +++F N+ W E+E Y+ C +ILVGNK
Sbjct: 69 AGQDRFKTITCSYYRGAHGIAVVFDITDKQSFENVKG-WMVEIEKYAQENVC-RILVGNK 126
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D + R V +EG LAQ + ++E SAK+ E+V Q F + +I+E +QG ++
Sbjct: 127 TDMNENRQVQYQEGQELAQMYNLNYIEVSAKSGENVDQVFTQMAKQIME-----KQGDSL 181
Query: 189 VKNQ 192
+K Q
Sbjct: 182 LKKQ 185
>gi|167521531|ref|XP_001745104.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776718|gb|EDQ90337.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 118/170 (69%), Gaps = 4/170 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+FK+L+IGDS GKSS+L++ + + PTIGVDFK K L + G ++ LT+WDTAGQ
Sbjct: 8 TFKVLIIGDSNCGKSSLLMAFTEGTFDESIGPTIGVDFKQKSLMLDGNKVNLTLWDTAGQ 67
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF TLT+SYYRGAH +IL+YDV+R ETF ++ +W EV +Y + VK+L+ NK+D
Sbjct: 68 ERFRTLTASYYRGAHAVILLYDVSRPETFEHI-DMWLNEVNVYCPEKKIVKLLIANKIDL 126
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL 181
ER V+ E G A++ + +F+ECSAK V+Q F++L K+L+ P L
Sbjct: 127 --ERRVSTEVGRDFARDKQMMFIECSAKTKAGVQQAFEELAQKVLDTPEL 174
>gi|89258421|gb|ABD65434.1| Rab10 [Suberites domuncula]
Length = 208
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 135/207 (65%), Gaps = 6/207 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
V +YD FK+LLIGDSGVGK+ +L ++ + TIG+DFKIK + + GKR+KL
Sbjct: 6 VPKKAYDLLFKLLLIGDSGVGKTCVLFRYADDTFNTTFISTIGIDFKIKTIELEGKRIKL 65
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GIILVYD+T +++F N++ W + +E++++ D +I
Sbjct: 66 QIWDTAGQERFHTITTSYYRGAMGIILVYDITNQKSFDNITK-WLQNIEMHAS-ADVERI 123
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL-EVPSLL 182
L+GNK D ++ R V ++ G LA FLE SAK ++++ F+ L +IL +VP+
Sbjct: 124 LIGNKCDWEARRVVPKDRGNALAHNQGISFLETSAKTNYNIEEAFEQLAKQILRKVPAKK 183
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
E + + N+ +K ++S + CC
Sbjct: 184 EDETVLDLNR--SKKSTEDSDKSSKCC 208
>gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|113531733|dbj|BAF04116.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|125524668|gb|EAY72782.1| hypothetical protein OsI_00645 [Oryza sativa Indica Group]
gi|125569264|gb|EAZ10779.1| hypothetical protein OsJ_00614 [Oryza sativa Japonica Group]
gi|215697672|dbj|BAG91666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765495|dbj|BAG87192.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 125/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + + V+ E A E F+E SAKN +V+Q F + I + + Q
Sbjct: 120 GNKSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A Q Q + +CCS
Sbjct: 178 AASNARPPTVQIRGQPVNQKTSCCS 202
>gi|146180701|ref|XP_001021320.2| Ras family protein [Tetrahymena thermophila]
gi|146144411|gb|EAS01075.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777750|dbj|BAJ21271.1| Rab-family small GTPase Rab1A [Tetrahymena thermophila]
Length = 211
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 128/200 (64%), Gaps = 19/200 (9%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIG+S VGKSS+LL N +D PTIGVDFKI+ + GK +KL IWDT
Sbjct: 7 YDYLFKLLLIGNSAVGKSSLLLRFSDNIFNDCFLPTIGVDFKIRTFDIQGKAVKLQIWDT 66
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYY+GAHGIILVYD+T ++TF ++ + W E + + N++ +K+LVGNK
Sbjct: 67 AGQERFKTITSSYYKGAHGIILVYDITDKQTFKDIDN-WLAEAD-KNANENVIKLLVGNK 124
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D +S+R VT EEG LA F+E SA N+ +V+ F L +I
Sbjct: 125 ADLESKRQVTFEEGKELADSLGIKFIETSALNSNNVETAFITLATEI------------- 171
Query: 189 VKNQILKQKEVQESARGGNC 208
K+++ QK + + RG N
Sbjct: 172 -KSRV--QKNTETAPRGANA 188
>gi|443710459|gb|ELU04712.1| hypothetical protein CAPTEDRAFT_155110 [Capitella teleta]
Length = 198
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 133/207 (64%), Gaps = 11/207 (5%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ +L ++ + TIG+DFKIK + +GGK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVELGGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T +TF N+S W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKTFDNISK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL-EVPSLL 182
++GNK D + +R V ++ G +A+EH FLE SAK+ +V++ F DL IL + PS
Sbjct: 119 ILGNKCDIEDKRQVPKQRGESIAREHGIPFLETSAKSNVNVEKAFMDLAQAILNKTPSKD 178
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
G K ++ +S G CC
Sbjct: 179 ADGHN-------KAVDIHKSESKGRCC 198
>gi|198418247|ref|XP_002129883.1| PREDICTED: similar to Ras-related protein Rab-10 [Ciona
intestinalis]
Length = 202
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 133/207 (64%), Gaps = 8/207 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ +L ++ + TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA+GI+LVYD+T ++F N+S W + +E +++ +D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGANGIMLVYDITNTKSFENISK-WLRNIEEHAS-EDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
L+GNK D + +R +++E G ++A+EH F E SAKN +++ F L IL + E
Sbjct: 119 LLGNKCDMEDKRMISKERGEMIAKEHGIKFYETSAKNNINIETAFIALATDILHKTPVKE 178
Query: 184 QGSAVVKNQILKQKEVQESARGGNCCS 210
G+ + +Q++ S CCS
Sbjct: 179 TGAGSAGVDVTQQRQSSRS-----CCS 200
>gi|403295007|ref|XP_003938448.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 235
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 125/202 (61%), Gaps = 34/202 (16%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIW---- 66
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IW
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVTLH 66
Query: 67 -------------------------DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFT 101
DTAGQERF TLT SYYRGA G+ILVYDVTRR+TF
Sbjct: 67 WQTENFFLKGQIGFSPDLKWPIWQSDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFV 126
Query: 102 NLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNT 161
L + W E+E Y T D V +LVGNK+D+++ R V R EG+ A++H LF+E SAK
Sbjct: 127 KLDN-WLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTC 184
Query: 162 EDVKQCFKDLLYKILEVPSLLE 183
+ V+ F++L+ KI++ P L E
Sbjct: 185 DGVQCAFEELVEKIIQTPGLWE 206
>gi|290970854|ref|XP_002668282.1| rab family small GTPase [Naegleria gruberi]
gi|284081592|gb|EFC35538.1| rab family small GTPase [Naegleria gruberi]
Length = 197
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 128/206 (62%), Gaps = 19/206 (9%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWD 67
++D++FK++L+GDS GKSSI+ + + SPTIGVDFK+K + V K++KLTI+D
Sbjct: 5 AFDHNFKLVLVGDSATGKSSIITQFTEDEFKEQMSPTIGVDFKVKFMNVNRKKVKLTIFD 64
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAG AHGIILVYDVTR ETF N+ + W KE +LYST ++CVK+L+GN
Sbjct: 65 TAG-------------NAHGIILVYDVTREETFNNIKN-WLKECDLYSTFEECVKLLIGN 110
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
K+D ER V+ ++ A+ + +++E SAK E+V + F++++Y+IL +LLE
Sbjct: 111 KIDLKEERKVSLQDAQNFAKSNNMVYIETSAKTKENVDKAFEEVVYQILNTTNLLESTEP 170
Query: 188 V----VKNQILKQKEVQESARGGNCC 209
V N + E ES G CC
Sbjct: 171 VRNKPTDNVNISTSEPNESEGGSGCC 196
>gi|183235021|ref|XP_649033.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169800780|gb|EAL43647.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709560|gb|EMD48804.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 199
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 131/201 (65%), Gaps = 7/201 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
+DY FKIL+IGDSGVGKS +LL + D TIGVDFKIK L + G+ +KL IWDT
Sbjct: 5 FDYLFKILMIGDSGVGKSCLLLRFSDDVFSDTYITTIGVDFKIKTLKINGRDIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT ++F ++ W E+E + + + VK+L+GNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDVQSFNHIRQ-WLNEIE-GNASPNVVKMLIGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D+D+ +AV+ E+ A++ F E SAK + +V+ F +L ++ + +++ V
Sbjct: 123 ADKDATKAVSTEQAAEFAKQEGMKFFETSAKQSINVEAAFLELAQ---DIKNQMKETPRV 179
Query: 189 VKNQILKQKEVQESARGGNCC 209
+ + + EVQ+ + G CC
Sbjct: 180 TPDNVAIKPEVQQEPQPG-CC 199
>gi|170579409|ref|XP_001894818.1| Ras-related protein Rab-18A [Brugia malayi]
gi|158598441|gb|EDP36329.1| Ras-related protein Rab-18A, putative [Brugia malayi]
Length = 194
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 120/173 (69%), Gaps = 11/173 (6%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS++L + ++ DP + TIGVDF++ + V R DTAG
Sbjct: 10 TLKILIIGESGVGKSSLMLRFVDDT-FDPEIAATIGVDFRVTSMMVNQNR------DTAG 62
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+I VYDV+ R+TF LS W EV+ YST D VK+L+GNK+D
Sbjct: 63 QERFRTLTPSYYRGAQGVICVYDVSNRQTFERLSH-WMNEVDTYSTKTDAVKMLIGNKID 121
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
S R VTREEG+ A++H+ LF+E SAK E V+ F++L+ K+L+ P L +
Sbjct: 122 I-SSREVTREEGLEFAKKHRMLFIEASAKTREGVQCAFEELIEKVLQTPGLWD 173
>gi|449016131|dbj|BAM79533.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 209
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 130/206 (63%), Gaps = 8/206 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTV-GGKRLKLTIWD 67
+DY FK+LLIGDSGVGKS +LL S D TIGVDFKIK L GK +KL IWD
Sbjct: 6 FDYLFKLLLIGDSGVGKSCLLLRFAEGSFSDSFMSTIGVDFKIKSLQFEDGKVVKLQIWD 65
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+TSSYYRGAHGII+V+DVT E+F N++S W E+E Y++ C K+LVGN
Sbjct: 66 TAGQERFRTITSSYYRGAHGIIIVFDVTDEESFKNVTS-WISEIENYASESVC-KLLVGN 123
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
K D +R VTR++ LAQ ++E SAK + V++ F K++ + +
Sbjct: 124 KTDLTEQRVVTRQQAEELAQRLGIPYIETSAKTADHVEEAFVMMTKEIRNRTGNLALAKG 183
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
G+ ++ + + E ++ ++ G CC
Sbjct: 184 SGAGTSRSGVDVRAETEQVSQSGGCC 209
>gi|330806499|ref|XP_003291206.1| Rab GTPase [Dictyostelium purpureum]
gi|325078628|gb|EGC32269.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 119/166 (71%), Gaps = 3/166 (1%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
+K+LLIGDS VGK+SI+ ++ + TIGV+FK+K + V GK++ L IWDTAGQ
Sbjct: 6 QYKVLLIGDSDVGKTSIVKRFSDDTFDEEVLTTIGVEFKMKEVKVDGKKVDLCIWDTAGQ 65
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
E+F L SSYYRGAHGIIL YDVT+R+TF NL + W EVE ++ + VK+LVGNK+D+
Sbjct: 66 EKFRALISSYYRGAHGIILTYDVTKRDTFENL-NYWLNEVENFANRSNLVKLLVGNKIDK 124
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
++ R ++REEG A++ LF+ECSAK ++Q F++L KI+E
Sbjct: 125 EN-REISREEGAEFAKKKAMLFIECSAKTKIGIQQAFEELAQKIIE 169
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 115/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ N++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQ-WLNEIDRYA-NENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++RAV E A E FLE SAKN +V+Q F + +I
Sbjct: 120 GNKSDLTAKRAVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|326493844|dbj|BAJ85384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 127/205 (61%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D R V+ E G LA E FLE SAK+ +V++ F + +I + G
Sbjct: 120 GNKCDLAESRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMASQPAG 179
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A + Q Q A+ CCS
Sbjct: 180 NASKPATV--QMRGQPVAQQNGCCS 202
>gi|89257579|gb|ABD65068.1| GTP-binding protein, putative [Brassica oleracea]
Length = 202
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 126/206 (61%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+ YDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQ 184
GNK D S++ V+ E A E FLE SAKN +V++ F + I + S
Sbjct: 120 GNKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAG 179
Query: 185 GSAVVKNQILKQKEVQESARGGNCCS 210
GS QI Q Q+S CCS
Sbjct: 180 GSKPSTVQIRGQPVNQQSG----CCS 201
>gi|357508061|ref|XP_003624319.1| Ras-like protein [Medicago truncatula]
gi|355499334|gb|AES80537.1| Ras-like protein [Medicago truncatula]
Length = 202
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 128/206 (62%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D SERAV+ + A E F+E SAK++ +V+Q F + I + + S
Sbjct: 120 GNKCDLTSERAVSYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDRMASQPTN 179
Query: 185 GSAVVKNQILKQKEVQESARGGNCCS 210
+ QI Q Q+S CCS
Sbjct: 180 NARPPTVQIRGQPVGQKSG----CCS 201
>gi|308081088|ref|NP_001183566.1| uncharacterized protein LOC100502159 [Zea mays]
gi|194700886|gb|ACF84527.1| unknown [Zea mays]
gi|238013122|gb|ACR37596.1| unknown [Zea mays]
gi|413923310|gb|AFW63242.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
gi|413938043|gb|AFW72594.1| hypothetical protein ZEAMMB73_730860 [Zea mays]
Length = 203
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 124/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + + V E A E F+E SAKN +V+Q F + I + + Q
Sbjct: 120 GNKSDLTANKVVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A Q Q + +CCS
Sbjct: 178 AAANARPATVQIRGQPVNQKTSCCS 202
>gi|331234359|ref|XP_003329839.1| hypothetical protein PGTG_11776 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308829|gb|EFP85420.1| hypothetical protein PGTG_11776 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 236
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 118/173 (68%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISN---SVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+ K+LLIG S VGKSS+LL S + S TIGVDFK KL+ GKR KL+IWDTA
Sbjct: 30 TLKLLLIGSSSVGKSSLLLRFTDQVFLSAEESSATIGVDFKFKLIDHKGKRYKLSIWDTA 89
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYS-TNQDCVKILVGNK 128
GQERF TLTSSYYRGA G++LVYDVT R +F +L S W E++ ++ + QD V+++VGNK
Sbjct: 90 GQERFRTLTSSYYRGAQGVLLVYDVTNRASFESLPS-WFSELDTFAHSPQDVVRVIVGNK 148
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL 181
VD+D R V+ +EG A ++ +F E S K + V + F+ ++ KI++ SL
Sbjct: 149 VDKDESRTVSTDEGRAFASDNHAMFFETSVKTRKGVDEVFEAVVDKIIDSISL 201
>gi|89257443|gb|ABD64935.1| GTP-binding protein, putative [Brassica oleracea]
Length = 203
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 125/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+ YDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D S++ V+ E A E FLE SAKN +V++ F + I + G
Sbjct: 120 GNKNDLTSQKVVSTETAQAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPSG 179
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
A ++ + V + G CCS
Sbjct: 180 GAKPPTVQIRGQPVNQQQSG--CCS 202
>gi|388506692|gb|AFK41412.1| unknown [Medicago truncatula]
Length = 202
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 126/205 (61%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V+ E A E F+E SAKN +V+Q F + +I +
Sbjct: 120 GNKSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPAN 179
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
SA ++ + V + A CCS
Sbjct: 180 SARPATVQIRGQPVNQKA---GCCS 201
>gi|255637404|gb|ACU19030.1| unknown [Glycine max]
Length = 202
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 127/205 (61%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+ LIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLFLIGDSGVGKSCLLLRFADDSYIESYINTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ RAV+ E A E F+E SAK+ +V+Q F + I + + Q
Sbjct: 120 GNKCDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+ + + Q Q A+ G CCS
Sbjct: 178 ANNARPPTV-QIRGQPVAQKGGCCS 201
>gi|388500972|gb|AFK38552.1| unknown [Medicago truncatula]
Length = 202
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 128/206 (62%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D SERAV+ + A E F+E SAK++ +V+Q F + I + + S
Sbjct: 120 GNKCDLTSERAVSYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDRMASQPTN 179
Query: 185 GSAVVKNQILKQKEVQESARGGNCCS 210
+ QI Q Q+S CCS
Sbjct: 180 NARPPTVQIRGQPVGQKSG----CCS 201
>gi|217071342|gb|ACJ84031.1| unknown [Medicago truncatula]
Length = 202
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 126/205 (61%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V+ E A E F+E SAKN +V+Q F + +I +
Sbjct: 120 GNKSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPAN 179
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
SA ++ + V + A CCS
Sbjct: 180 SARPATVQIRGQPVNQKA---GCCS 201
>gi|226468180|emb|CAX76317.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 123/205 (60%), Gaps = 10/205 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +L+ S + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPDYDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGA GII+VYDVT + +F N+ S W +E+E Y+ N ++LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKS-WLQEIEHYA-NSTVNRLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQ 184
GNK D RAV + M A+EH+ FLE SAK +V+ F ++ +I +
Sbjct: 120 GNKCDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTAPMQSM 179
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
S V N Q + G CC
Sbjct: 180 PSNVTVN------STQPVTKSGGCC 198
>gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|109940139|sp|P40392.2|RIC1_ORYSJ RecName: Full=Ras-related protein RIC1
gi|57899331|dbj|BAD87942.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|57900421|dbj|BAD87657.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|113532867|dbj|BAF05250.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|125526416|gb|EAY74530.1| hypothetical protein OsI_02420 [Oryza sativa Indica Group]
gi|125570818|gb|EAZ12333.1| hypothetical protein OsJ_02222 [Oryza sativa Japonica Group]
gi|215769435|dbj|BAH01664.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 202
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 126/205 (61%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D R V+ E G LA E FLE SAK+ +V++ F + +I + Q
Sbjct: 120 GNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKN--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+ Q Q A+ +CCS
Sbjct: 178 ATNASKPATVQMRGQPVAQQSSCCS 202
>gi|2317906|gb|AAC24370.1| ARA-5 [Arabidopsis thaliana]
Length = 258
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 125/209 (59%), Gaps = 5/209 (2%)
Query: 3 SKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRL 61
SK N YDY FK+LLIGDSGVGKS +LL +S V TIGVDFKI+ + GK +
Sbjct: 53 SKTMNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTI 112
Query: 62 KLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCV 121
KL IWDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ +
Sbjct: 113 KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVN 170
Query: 122 KILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL 181
K+LVGNK D RA+ E A E F+E SAK+ +V+Q F + I E +
Sbjct: 171 KLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMAS 230
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCCS 210
G+ + Q Q A+ CCS
Sbjct: 231 QPAGNNARPPTV--QIRGQPVAQKNGCCS 257
>gi|392574050|gb|EIW67187.1| hypothetical protein TREMEDRAFT_40402 [Tremella mesenterica DSM
1558]
Length = 205
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 127/203 (62%), Gaps = 6/203 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT R+TFTN+ W +E++ Y+ + K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDRDTFTNVKQ-WLQEIDRYAV-EGVNKLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLEQGS 186
D +++ V E A E FLE SAKN +V+Q F + +I + + + GS
Sbjct: 124 SDLTTKKVVEHNEAKSFADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGSTSMASGS 183
Query: 187 AVVKNQILKQKEVQESARGGNCC 209
K+ I + E G CC
Sbjct: 184 G-GKSTIKGLGQTVEQKTAGGCC 205
>gi|326506468|dbj|BAJ86552.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516366|dbj|BAJ92338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 126/205 (61%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +++F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +RAV+ E A E F+E SAKN +V+Q F + I + + Q
Sbjct: 120 GNKCDLADKRAVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMAASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A Q Q + +CCS
Sbjct: 178 AANNARPATVQIRGQPVDQKTSCCS 202
>gi|145477777|ref|XP_001424911.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833757|emb|CAI39348.1| rab_B10 [Paramecium tetraurelia]
gi|124391978|emb|CAK57513.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 130/203 (64%), Gaps = 6/203 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIWD 67
YDY FKILLIG+S VGKSS+LL S+ + S PTIGVDFKI+ + GK +K+ IWD
Sbjct: 7 YDYLFKILLIGNSAVGKSSLLLRF-SDQIFSESFLPTIGVDFKIRTFDMQGKSVKMQIWD 65
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T+SYY+GAHGIIL YD+T +++F ++ + W EVE +++ ++ V++LVGN
Sbjct: 66 TAGQERFKTITASYYKGAHGIILTYDITDKQSFKDIEN-WLAEVEKHAS-ENVVRLLVGN 123
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQGS 186
K D +S+R VT EEG LA F+E SAK +V Q F L I ++ ++ +
Sbjct: 124 KADLESKRQVTYEEGKELADSLGIKFIEASAKANTNVDQAFMTLANNIKAKIGKSEDKPT 183
Query: 187 AVVKNQILKQKEVQESARGGNCC 209
K K Q + + G CC
Sbjct: 184 PGGKTPTGGLKNPQPTKKEGTCC 206
>gi|302794149|ref|XP_002978839.1| rab family GTPase [Selaginella moellendorffii]
gi|300153648|gb|EFJ20286.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 129/211 (61%), Gaps = 17/211 (8%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI----LEVPSL 181
GNK D +++ V + A E FLE SAKN +V+Q F + +I PS+
Sbjct: 120 GNKCDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPSM 179
Query: 182 LEQGSAVV--KNQILKQKEVQESARGGNCCS 210
+ + Q+L+ K NCCS
Sbjct: 180 SSAKPTTIPLRGQVLQHKP--------NCCS 202
>gi|217073632|gb|ACJ85176.1| unknown [Medicago truncatula]
Length = 207
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/163 (53%), Positives = 112/163 (68%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D SERA + + A E F+E SAK++ +V+Q F
Sbjct: 120 GNKCDLTSERAASYDTAKAFADEIGIPFMETSAKDSTNVEQAF 162
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 204
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 126/202 (62%), Gaps = 17/202 (8%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D S++ V E A E FLE SAKN +V+Q F +
Sbjct: 120 GNKSDLASKKVVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTM-------------- 165
Query: 186 SAVVKNQILKQKEVQESARGGN 207
+A +KN++ Q + +++ N
Sbjct: 166 AAEIKNRMASQPALSSTSKPNN 187
>gi|168027123|ref|XP_001766080.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682723|gb|EDQ69139.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 128/215 (59%), Gaps = 8/215 (3%)
Query: 2 GSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKR 60
G YDY K+LLIGDSGVGKS +LL +S TIG+DFKI+ + + GKR
Sbjct: 4 GGSRARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKR 63
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
+KL IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ +
Sbjct: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NV 121
Query: 121 VKILVGNKVDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKI 175
KILVGNK D D S+RAV +G LA E F E SAK +V+ F +D+ ++
Sbjct: 122 NKILVGNKADMDESKRAVPTAKGQALADEFGIKFFETSAKTNMNVEDVFFTIARDIKQRL 181
Query: 176 LEVPSLLEQGSAVVKNQILKQKEVQESARGGNCCS 210
E S EQ + L Q A G +CCS
Sbjct: 182 AETDSKPEQPAKAAPGVKLSAGGAQPKAAGSSCCS 216
>gi|225454983|ref|XP_002281150.1| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
gi|297744977|emb|CBI38569.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 128/211 (60%), Gaps = 17/211 (8%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NQEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSL 181
GNK D + + V+ E A E F+E SAKN +V+Q F D+ ++ P++
Sbjct: 120 GNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAADIKTRMASQPAM 179
Query: 182 --LEQGSAVVKNQILKQKEVQESARGGNCCS 210
S ++ Q + QK CCS
Sbjct: 180 NNARPPSVQLQGQPVNQK--------SGCCS 202
>gi|302787773|ref|XP_002975656.1| rab family GTPase [Selaginella moellendorffii]
gi|300156657|gb|EFJ23285.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 129/211 (61%), Gaps = 17/211 (8%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI----LEVPSL 181
GNK D +++ V + A E FLE SAKN +V+Q F + +I PS+
Sbjct: 120 GNKCDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPSM 179
Query: 182 LEQGSAVV--KNQILKQKEVQESARGGNCCS 210
+ + Q+L+ K NCCS
Sbjct: 180 SAAKPTTIPLRGQVLQHKP--------NCCS 202
>gi|255539911|ref|XP_002511020.1| protein with unknown function [Ricinus communis]
gi|223550135|gb|EEF51622.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 127/209 (60%), Gaps = 13/209 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSL 181
GNK D + + V+ E A E F+E SAKN +V+Q F D+ ++ P+
Sbjct: 120 GNKSDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAADIKNRMASQPAA 179
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCCS 210
V QI Q Q+S CCS
Sbjct: 180 NNARPPTV--QIRGQPVNQKSG----CCS 202
>gi|255634140|gb|ACU17433.1| unknown [Glycine max]
Length = 212
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/163 (53%), Positives = 112/163 (68%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D ++ RAV+ E A E F+E SAK+ +V+Q F
Sbjct: 120 GNKCDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAF 162
>gi|224136446|ref|XP_002326862.1| predicted protein [Populus trichocarpa]
gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa]
gi|222835177|gb|EEE73612.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 130/211 (61%), Gaps = 17/211 (8%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE----VPSL 181
GNK D S + V+ E+ A E F+E SAK+ +V+Q F + I + P++
Sbjct: 120 GNKSDLTSNKVVSYEQAKAFADEIGIPFMETSAKDATNVEQAFMAMSAAIKDRMASQPAM 179
Query: 182 LEQGSAVV--KNQILKQKEVQESARGGNCCS 210
+ V K Q ++QK G CCS
Sbjct: 180 NNAKPSTVQFKGQPVEQK--------GGCCS 202
>gi|225465202|ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis vinifera]
gi|297739505|emb|CBI29687.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 126/204 (61%), Gaps = 5/204 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YDY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNDYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + V E A E FLE SAK++ +V+Q F + +I + + Q
Sbjct: 120 GNKCDLVENKVVDTETAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKK--KMGNQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+A ++ Q + Q + NCC
Sbjct: 178 NATARSSSTVQMKGQPIQQNSNCC 201
>gi|221482114|gb|EEE20475.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 230
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 124/199 (62%), Gaps = 3/199 (1%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 34 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTA 93
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT RE+F N+ + W E++ Y+ + K+LVGNK
Sbjct: 94 GQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKN-WMMEIDKYAM-EGVSKLLVGNKC 151
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D S+R VT EEG A F+E SAKN +V+Q F + +I + +Q S
Sbjct: 152 DLTSKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARVQVNQQQSRPN 211
Query: 190 KNQILKQKEVQESARGGNC 208
N L + S G C
Sbjct: 212 ANVRLGPSQPVRSVSSGCC 230
>gi|164658714|ref|XP_001730482.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
gi|159104378|gb|EDP43268.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
Length = 212
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 130/207 (62%), Gaps = 9/207 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 67
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT TF N+ W +E+E Y+ + K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDESTFANVKQ-WLQEIERYAC-EGVNKLLVGNK 125
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVP--SLLEQGS 186
D + +AV E LA E FL+ SAK+ +V+Q F + +I + S ++ GS
Sbjct: 126 ADLTNSKAVDFESAKQLADELGIAFLDTSAKDATNVEQAFLTMAKQIKDRMGVSAMQNGS 185
Query: 187 AVVKN----QILKQKEVQESARGGNCC 209
A ++ + + VQ S+ G CC
Sbjct: 186 AGGAGKSTLKVGQGQNVQASSNSGGCC 212
>gi|226470408|emb|CAX70484.1| Rab-protein 10 [Schistosoma japonicum]
Length = 205
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 130/193 (67%), Gaps = 6/193 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
+ SYD FK+LLIGDSGVGK+ +L+ + S + PS TIG+DFKIK + + GK++K
Sbjct: 1 MAKKSYDALFKLLLIGDSGVGKTCLLIRYVDGS-YSPSFISTIGIDFKIKTIELEGKKIK 59
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T+SYYRGA G +++YD+T R TF N+ + W K + Y++ +D K
Sbjct: 60 LQIWDTAGQERFHTITTSYYRGAMGRMMIYDITNRRTFDNIQT-WMKNICDYAS-EDVEK 117
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL-EVPSL 181
++VGNK D D+ RAV+ EEG A+ H+ FLE SA E+V + F++L IL + P+
Sbjct: 118 LVVGNKCDFDNRRAVSYEEGSEKARLHRIKFLETSAMTGENVNKAFEELTLAILRKTPTR 177
Query: 182 LEQGSAVVKNQIL 194
+ S V ++ L
Sbjct: 178 GHEPSTVTQSHRL 190
>gi|17558550|ref|NP_503397.1| Protein RAB-1 [Caenorhabditis elegans]
gi|351059221|emb|CCD67094.1| Protein RAB-1 [Caenorhabditis elegans]
Length = 205
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 129/204 (63%), Gaps = 4/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD+T +ETF N+ W +E++ Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ-WLQEIDRYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++RAV + A + FLE SAK++ +V+Q F + +I ++
Sbjct: 123 GNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGA 182
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+I + VQ+ GG CC
Sbjct: 183 GGAPGVRITGSQPVQDKKSGG-CC 205
>gi|313231127|emb|CBY19125.1| unnamed protein product [Oikopleura dioica]
Length = 220
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 122/175 (69%), Gaps = 5/175 (2%)
Query: 3 SKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKR 60
S +YDY FK+LLIGDSGVGK+ +L NS +P+ TIG+DFKI+ + + GKR
Sbjct: 12 SIAAQKAYDYLFKLLLIGDSGVGKTCLLFRFAENSF-NPTFISTIGIDFKIQTVEIDGKR 70
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
+KL +WDTAGQERF T+T++YYRGA GI+LVYDVT ++TF N+++ W K +E ++ +
Sbjct: 71 IKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTSKKTFENITN-WLKNIEEHAA-EGV 128
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
++LV NK D++ +R ++ E+G +LA H F+ECSA E+V++ F + ++
Sbjct: 129 EQLLVANKCDQEDKRVISEEQGQLLAVHHGIDFIECSAMTGENVREAFYRMARRV 183
>gi|15236555|ref|NP_193486.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
gi|297800342|ref|XP_002868055.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|75204021|sp|Q9SEH3.1|RAD2C_ARATH RecName: Full=Ras-related protein RABD2c; Short=AtRABD2c; AltName:
Full=Ras-related protein Rab1C; Short=AtRab1C
gi|6651023|gb|AAF22133.1|AF127134_1 ras-related small GTP-binding protein [Arabidopsis thaliana]
gi|7268505|emb|CAB78756.1| ras-related small GTP-binding protein RAB1c [Arabidopsis thaliana]
gi|15529161|gb|AAK97675.1| AT4g17530/dl4800c [Arabidopsis thaliana]
gi|110742819|dbj|BAE99310.1| ras-related small GTP-binding protein RAB1c [Arabidopsis thaliana]
gi|297313891|gb|EFH44314.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|332658507|gb|AEE83907.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
Length = 202
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 125/206 (60%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+ YDVT E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQ 184
GNK D S++ V+ E A E FLE SAKN +V++ F + I + S
Sbjct: 120 GNKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAG 179
Query: 185 GSAVVKNQILKQKEVQESARGGNCCS 210
GS QI Q Q+S CCS
Sbjct: 180 GSKPPTVQIRGQPVNQQSG----CCS 201
>gi|399163137|gb|AFP33144.1| rab-1, partial [Caenorhabditis elegans]
Length = 204
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 129/204 (63%), Gaps = 4/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 4 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 63
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD+T +ETF N+ W +E++ Y+ ++ K+LV
Sbjct: 64 WDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ-WLQEIDRYAC-ENVNKLLV 121
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++RAV + A + FLE SAK++ +V+Q F + +I ++
Sbjct: 122 GNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGA 181
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+I + VQ+ GG CC
Sbjct: 182 GGAPGVRITGSQPVQDKKSGG-CC 204
>gi|256071955|ref|XP_002572303.1| rab-18 [Schistosoma mansoni]
gi|353229802|emb|CCD75973.1| putative rab-18 [Schistosoma mansoni]
Length = 211
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 131/203 (64%), Gaps = 7/203 (3%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTV-GGKRLKLTIWDTAG 70
+FK+LLIGDSGVGKSS+L+ ++ S TIGVDFK+K +TV G ++KL+IWDTAG
Sbjct: 11 NFKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKHVTVPDGTKIKLSIWDTAG 70
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT + YRG+H + V+DV+ RE+F +L+S W +E++ YS N D +K+LVGNK+D
Sbjct: 71 QERFRTLTPNVYRGSHAAVFVFDVSNRESFDHLNS-WMEELKTYSDNPDMIKLLVGNKID 129
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
S R ++REEG+ ++ + + E SAK +E V Q F D++ +I L QG
Sbjct: 130 NIS-REISREEGLRFSRLYNMPYAETSAKTSEGVNQLFSDVVTRIYNHSELWNQGKKRAN 188
Query: 191 NQILKQK---EVQESARGGNCCS 210
+ E+++ +CCS
Sbjct: 189 TNSSSRAHLTELEDKQTRSSCCS 211
>gi|168030217|ref|XP_001767620.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681149|gb|EDQ67579.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 203
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 125/202 (61%), Gaps = 17/202 (8%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D S++ V A E FLE SAKN +V+Q F +
Sbjct: 120 GNKSDLASKKVVDYATAKAFADEIGIPFLETSAKNATNVEQAFMTM-------------- 165
Query: 186 SAVVKNQILKQKEVQESARGGN 207
+A +KN++ Q + ++R N
Sbjct: 166 AAEIKNRMASQPALSSTSRPNN 187
>gi|390465163|ref|XP_003733352.1| PREDICTED: uncharacterized protein LOC100402013 [Callithrix
jacchus]
Length = 235
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 124/202 (61%), Gaps = 34/202 (16%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIW---- 66
+ K L+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IW
Sbjct: 8 TLKFLIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVSLH 66
Query: 67 -------------------------DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFT 101
DTAGQERF TLT SYYRGA G+ILVYDVTRR+TF
Sbjct: 67 QHTKNFFLKGQIGFRPTLKWPIWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFV 126
Query: 102 NLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNT 161
L + W E+E Y T D V +LVGNK+D+++ R V R EG+ A++H LF+E SAK
Sbjct: 127 KLDN-WLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTC 184
Query: 162 EDVKQCFKDLLYKILEVPSLLE 183
+ V+ F++L+ KI++ P L E
Sbjct: 185 DGVQCAFEELVEKIIQTPGLWE 206
>gi|260804583|ref|XP_002597167.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
gi|229282430|gb|EEN53179.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
Length = 204
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 127/207 (61%), Gaps = 11/207 (5%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A + FLE SAKN +V+Q F + +I G
Sbjct: 123 GNKSDLTTKKVVDYTTAKEFADQLHIPFLETSAKNATNVEQAFMTMAAEIKN-----RMG 177
Query: 186 SAVVKNQILKQKEVQESA---RGGNCC 209
V N+ + ++Q + GG CC
Sbjct: 178 PGAVTNETKQNVKIQSTPVKQSGGGCC 204
>gi|192910784|gb|ACF06500.1| Ras-related protein RIC1 [Elaeis guineensis]
Length = 202
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 130/209 (62%), Gaps = 13/209 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI----LEVPSL 181
GNK D + R V+ E G A E FLE SAK+ +V++ F + +I P++
Sbjct: 120 GNKCDLAANRVVSYETGKAFADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMASQPAM 179
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCCS 210
A V Q+ Q Q+S+ CCS
Sbjct: 180 NASRPATV--QMRGQPVTQKSS----CCS 202
>gi|56753633|gb|AAW25019.1| SJCHGC09359 protein [Schistosoma japonicum]
gi|226466726|emb|CAX69498.1| Rab-protein 8 [Schistosoma japonicum]
Length = 205
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 117/163 (71%), Gaps = 3/163 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGK+SILL N + TIG+DFKI+ + + GK++KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTSILLRFSDNLFNQTFISTIGIDFKIRTVDIDGKKIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYD+T + +F N+ + W + ++ ++ N D K+L+GNK
Sbjct: 65 AGQERFKTITTAYYRGAMGIMLVYDITNQHSFNNIKT-WMQNIDEHANN-DVEKMLLGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDL 171
D D +R ++ ++G+ LA H LF+E SAK+ ++ + F+ L
Sbjct: 123 CDVDEKRQISFQQGLQLANSHNILFMETSAKSNINITEAFEAL 165
>gi|350538481|ref|NP_001233833.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053067|gb|AAA80680.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 115/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD+T +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQ-WLSEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D + RAV+ + A E F+E SAK+ +V+Q F + +I
Sbjct: 120 GNKSDLNDNRAVSYDTAKAFADEIGIPFMEASAKSATNVEQAFMAMAAEI 169
>gi|350538375|ref|NP_001233828.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053065|gb|AAA80679.1| small GTP-binding protein [Solanum lycopersicum]
Length = 202
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 132/210 (62%), Gaps = 17/210 (8%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YDY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ N+ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYA-NESVCKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSL 181
GNK D + V + G LA E FLE SAK++ +V+Q F ++ K+ P+
Sbjct: 120 GNKCDLVENKVVDTQMGKALADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQPAG 179
Query: 182 LEQ-GSAV-VKNQILKQKEVQESARGGNCC 209
++ GS V +K Q ++QK GNCC
Sbjct: 180 AKRTGSTVQIKGQPIEQK--------GNCC 201
>gi|389584207|dbj|GAB66940.1| small GTPase Rab1A [Plasmodium cynomolgi strain B]
Length = 221
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 137/225 (60%), Gaps = 27/225 (12%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLI----------------SNSVHDPS------PT 44
N+SYD FKILLIGDSGVGKS +LL ++ ++D + T
Sbjct: 2 NDSYDSLFKILLIGDSGVGKSCLLLRFARKRGRQTYLINRFETENDQINDDTYTDSYIST 61
Query: 45 IGVDFKIKLLTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLS 104
IGVDFKIK + + K +KL IWDTAGQERF T+TSSYYRGA GII+VYDVT R++F N+
Sbjct: 62 IGVDFKIKTIEIEDKIIKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVK 121
Query: 105 SVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDV 164
+ W E+E Y++ +D KIL+GNK+D ++R V+ EEG LA FLE SAK +V
Sbjct: 122 N-WIIEIEKYAS-EDVQKILIGNKIDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNV 179
Query: 165 KQCFKDLLYKILEVPSLLEQGSAVVKNQILKQKEVQESARGGNCC 209
+Q FK + ++I + S LE N L K ++++ + CC
Sbjct: 180 EQAFKTMAHEI-KNKSQLENQQKGRANINLNAKPIKDNKK--KCC 221
>gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum annuum]
Length = 203
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 115/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD+T +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQ-WLSEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D + RAV+ + A E F+E SAK+ +V+Q F + +I
Sbjct: 120 GNKSDLNDNRAVSYDTAKAFADEIGIPFMEASAKSATNVEQAFMAMAAEI 169
>gi|116782376|gb|ABK22484.1| unknown [Picea sitchensis]
Length = 202
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 130/203 (64%), Gaps = 7/203 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT ++F N+ W E++ Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQ-WLSEIDKYASD-NVSKLLVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQGSA 187
D +R V ++ A E FLE SAK+ +V+Q F + ++ + S L +G+
Sbjct: 123 CDMAEKRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFITMAGEVKRRMASQLTEGNR 182
Query: 188 VVKNQILKQKEVQESARGGNCCS 210
+K + +Q+ G+CCS
Sbjct: 183 KTNTVEMKGQPLQQK---GSCCS 202
>gi|449544952|gb|EMD35924.1| hypothetical protein CERSUDRAFT_53067 [Ceriporiopsis subvermispora
B]
Length = 223
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 115/170 (67%), Gaps = 5/170 (2%)
Query: 15 KILLIGDSGVGKSSILLSLISNSV---HDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
K+LLIG+S VGKSS+LL + S TIGVDF++ + V GK++KL+IWDTAGQ
Sbjct: 13 KLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMEVNGKKVKLSIWDTAGQ 72
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF T+TSSYYRGA GIILVYDV RE+F L W E+E Y + VKI+VGNKVD+
Sbjct: 73 ERFRTITSSYYRGAQGIILVYDVANRESFDALPR-WYSELETY-VSSSVVKIIVGNKVDK 130
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL 181
+ R V+ EG AQ LF+E SAK + V++ F++++ KI++ P L
Sbjct: 131 EFSRQVSYSEGQQFAQRMGSLFVEASAKTSVGVREAFQEVVEKIIDTPEL 180
>gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum]
gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738942|prf||2001457K GTP-binding protein
gi|1098293|prf||2115367A small GTP-binding protein
Length = 202
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 125/206 (60%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D RAV E A E F+E SAK++ +V+Q F + I E + S
Sbjct: 120 GNKCDLTENRAVPYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKERMASQPTN 179
Query: 185 GSAVVKNQILKQKEVQESARGGNCCS 210
+ QI Q Q+S CCS
Sbjct: 180 NARPPTVQIRGQPVGQKSG----CCS 201
>gi|82541361|ref|XP_724926.1| GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23479748|gb|EAA16491.1| putative GTPase [Plasmodium yoelii yoelii]
Length = 225
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 135/215 (62%), Gaps = 20/215 (9%)
Query: 10 YDYSFKILLIGDSGVGKSSILL----------SLISNSVHDPS-----PTIGVDFKIKLL 54
+D FKILLIGDSGVGKS +LL L +N D TIGVDFKIK +
Sbjct: 16 FDSLFKILLIGDSGVGKSCLLLRFAGLLKLFYKLRNNDTDDTYTDSYISTIGVDFKIKTI 75
Query: 55 TVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELY 114
+ K +KL IWDTAGQERF T+TSSYYRGA GII+VYDVT R++F N+ + W E+E Y
Sbjct: 76 EIDDKIIKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKN-WIIEIEKY 134
Query: 115 STNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYK 174
++ +D KIL+GNK+D ++R+V+ EEG LA+ FLE SAK + +V+Q FK + Y+
Sbjct: 135 AS-EDVQKILIGNKIDLKNDRSVSYEEGKELAESCNIQFLETSAKISHNVEQAFKTMAYE 193
Query: 175 ILEVPSLLEQGSAVVKNQILKQKEVQESARGGNCC 209
I + S LE N L K ++++ + CC
Sbjct: 194 I-KNKSQLENQQKGRANINLNAKPIKDNKK--KCC 225
>gi|298707797|emb|CBJ30228.1| Rab1B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/163 (53%), Positives = 113/163 (69%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + K +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQ-WLHEIDRYAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D +++RAVT EE A FLE SAKN +V++ F
Sbjct: 120 GNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAF 162
>gi|356563370|ref|XP_003549937.1| PREDICTED: GTP-binding protein YPTM2-like isoform 1 [Glycine max]
Length = 202
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D + + V+ E A E F+E SAKN +V+Q F + +I
Sbjct: 120 GNKCDLTANKVVSSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 169
>gi|355783089|gb|EHH65010.1| hypothetical protein EGM_18349 [Macaca fascicularis]
Length = 205
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 130/205 (63%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A LFLE SAKN +V+Q F + +I + +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGILFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 182
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S GG CC
Sbjct: 183 GGAEKSNVKIQSTPVKQS--GGGCC 205
>gi|145484709|ref|XP_001428364.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833834|emb|CAI39372.1| rab_A10 [Paramecium tetraurelia]
gi|124395449|emb|CAK60966.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 129/203 (63%), Gaps = 6/203 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIWD 67
YDY FKILLIG+S VGKSS+LL S+ + S PTIGVDFKI+ + GK +K+ IWD
Sbjct: 7 YDYLFKILLIGNSAVGKSSLLLRF-SDQIFSESFLPTIGVDFKIRTFDMQGKSVKMQIWD 65
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T+SYY+GAHGIIL YD+T +++F ++ + W EVE +++ ++ V++LVGN
Sbjct: 66 TAGQERFKTITASYYKGAHGIILTYDITDKQSFKDIEN-WLAEVEKHAS-ENVVRLLVGN 123
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQGS 186
K D +S+R VT EEG LA F+E SAK +V Q F L I ++ ++ +
Sbjct: 124 KADLESKRQVTYEEGKELADSLGIKFIEASAKANTNVDQAFMTLANNIKAKIGKSEDKPT 183
Query: 187 AVVKNQILKQKEVQESARGGNCC 209
K K + + G CC
Sbjct: 184 PGGKTPAGNLKNTSPAKKEGGCC 206
>gi|297814341|ref|XP_002875054.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297320891|gb|EFH51313.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 122/205 (59%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASDS-VNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + RAV E A E F+E SAK+ +V+Q F + I + + Q
Sbjct: 120 GNKCDLAANRAVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A Q Q + CCS
Sbjct: 178 AANNARPPTVQIRGQPVPQKNGCCS 202
>gi|15217622|ref|NP_171715.1| Ras-related protein RABD2A [Arabidopsis thaliana]
gi|205371858|sp|P28188.3|RAD2A_ARATH RecName: Full=Ras-related protein RABD2a; Short=AtRABD2a; AltName:
Full=Ras-related protein Ara-5; AltName:
Full=Ras-related protein Rab1B; Short=AtRab1B
gi|15450465|gb|AAK96526.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|16974457|gb|AAL31232.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|332189266|gb|AEE27387.1| Ras-related protein RABD2A [Arabidopsis thaliana]
Length = 203
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 123/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S V TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D RA+ E A E F+E SAK+ +V+Q F + I E + G
Sbjct: 120 GNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAG 179
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+ + Q Q A+ CCS
Sbjct: 180 NNARPPTV--QIRGQPVAQKNGCCS 202
>gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [Cicer arietinum]
Length = 202
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D + + V+ E A E F+E SAKN +V+Q F + +I
Sbjct: 120 GNKCDLAANKVVSSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 169
>gi|412986893|emb|CCO15319.1| predicted protein [Bathycoccus prasinos]
Length = 204
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 126/205 (61%), Gaps = 4/205 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +L ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLFRFADDTYQESYISTIGVDFKIRTVELEGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ + W E++ Y+ N++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKT-WLSEIDRYA-NENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQ 184
GNK D S++ V A E F+E SAKN +V+Q F + +I + S +
Sbjct: 120 GNKSDLTSKKVVDYATAKAFADEIGIPFMETSAKNATNVEQAFVTMANEIKTRMASQPQA 179
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
S + ++ E + +CC
Sbjct: 180 ASGASRGATIRPGEGRPVNAKSSCC 204
>gi|388502282|gb|AFK39207.1| unknown [Lotus japonicus]
Length = 209
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D + + V+ E A E F+E SAKN +V+Q F + +I
Sbjct: 120 GNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 169
>gi|401410672|ref|XP_003884784.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
gi|325119202|emb|CBZ54756.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
Length = 202
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 129/202 (63%), Gaps = 6/202 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT R++F N+ + W E++ Y+ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDRDSFNNVKN-WMMEIDKYAM-EGVSKLLVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D S+R V+ EEG A F+E SAKN +V+Q F + +I + +Q S
Sbjct: 123 CDLTSKRVVSFEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARVQVNQQQSRP 182
Query: 189 VKN-QILKQKEVQESARGGNCC 209
N +I + V+ + G CC
Sbjct: 183 NANVRIGPSQPVRNVSSG--CC 202
>gi|405976260|gb|EKC40773.1| Ras-related protein Rab-10 [Crassostrea gigas]
Length = 212
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 123/173 (71%), Gaps = 3/173 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ +L ++ + TIG+DFKIK + +GGK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVELGGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T +TF N+S W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNPKTFENISK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL 176
++GNK D +++R V+++ G +A+EH+ FLE SAK +V++ F DL IL
Sbjct: 119 ILGNKCDMENKRQVSKDRGEAIAKEHEIPFLETSAKANINVEKAFMDLAQAIL 171
>gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum]
gi|738940|prf||2001457H GTP-binding protein
Length = 202
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D + V+ E A E F+E SAKN +V+Q F + +I
Sbjct: 120 GNKSDLADNKVVSSETAKAFADEIGIPFMETSAKNANNVEQAFMAMAAEI 169
>gi|256073243|ref|XP_002572941.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|1016750|gb|AAA79138.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|353230960|emb|CCD77377.1| rab-related GTP-binding protein [Schistosoma mansoni]
Length = 205
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 129/207 (62%), Gaps = 5/207 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKL 63
+ SYD FKILLIGDSGVGK+ +L+ + S V TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKSYDALFKILLIGDSGVGKTCLLVRYVEESFVPTFISTIGIDFKIKTIELEGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+TSSYYRGA GI+L+YD+T R+TF N+ + + L S + K+
Sbjct: 61 QIWDTAGQERFHTITSSYYRGAMGIMLIYDITSRQTFDNVQTWMNRTFSLAS--NEVEKL 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
L+ NK D R V+ EEG A+E+ FLE SAK++ +V + F++L IL S+
Sbjct: 119 LIANKCDMAHNRVVSYEEGRQKAEEYGIGFLETSAKSSTNVHKAFEELTRAILHNSSIRR 178
Query: 184 QGSAVVKNQILKQKEVQESARGGNCCS 210
S+ V Q+ + E S G CCS
Sbjct: 179 HESSTV-TQVHRLAEPPNSI-SGTCCS 203
>gi|388520849|gb|AFK48486.1| unknown [Lotus japonicus]
Length = 202
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D + + V+ E A E F+E SAKN +V+Q F + +I
Sbjct: 120 GNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 169
>gi|413938044|gb|AFW72595.1| hypothetical protein ZEAMMB73_730860, partial [Zea mays]
Length = 207
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 124/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N +DY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 6 NQIFDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 65
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ + K+LV
Sbjct: 66 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLV 123
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + + V E A E F+E SAKN +V+Q F + I + + Q
Sbjct: 124 GNKSDLTANKVVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASIKD--RMASQP 181
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A Q Q + +CCS
Sbjct: 182 AAANARPATVQIRGQPVNQKTSCCS 206
>gi|359806422|ref|NP_001241498.1| uncharacterized protein LOC100783333 [Glycine max]
gi|255636244|gb|ACU18462.1| unknown [Glycine max]
Length = 202
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D + + V+ E A E F+E SAKN +V+Q F + +I
Sbjct: 120 GNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 169
>gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max]
Length = 202
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 127/205 (61%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ RAV+ E A F+E SAK+ +V+Q F + I + + Q
Sbjct: 120 GNKCDLEANRAVSYETAKAFADGIGIPFMETSAKDATNVEQAFMAMTASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+ + + Q Q A+ G CCS
Sbjct: 178 ANNARPPTV-QIRGQPVAQKGGCCS 201
>gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Solanum tuberosum]
Length = 203
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 127/206 (61%), Gaps = 7/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLRI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ + KILV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYASD-NVNKILV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL-EVPSLLEQ 184
GNK D + R V+ E A E FLE SAK+ +V+Q F + I + S
Sbjct: 120 GNKADLTANRVVSYETAKAFADEIGIPFLETSAKDATNVEQAFMAMTGAIKNRMASQPAS 179
Query: 185 GSAVVKNQILKQKEVQESARGGNCCS 210
SA ++ + V +S G CCS
Sbjct: 180 NSAKPPTVNIRGQPVTQS---GGCCS 202
>gi|18422766|ref|NP_568678.1| RAB GTPase-1A [Arabidopsis thaliana]
gi|297794499|ref|XP_002865134.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|75172011|sp|Q9FPJ4.1|RAD2B_ARATH RecName: Full=Ras-related protein RABD2b; Short=AtRABD2b; AltName:
Full=Ras-related protein Rab1A; Short=AtRab1A
gi|11762128|gb|AAG40342.1|AF324990_1 AT5g47200 [Arabidopsis thaliana]
gi|19347885|gb|AAL85999.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21281060|gb|AAM45061.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21553520|gb|AAM62613.1| ras-related small GTP-binding protein-like protein [Arabidopsis
thaliana]
gi|71143080|gb|AAZ23931.1| At5g47200 [Arabidopsis thaliana]
gi|107738243|gb|ABF83667.1| At5g47200 [Arabidopsis thaliana]
gi|110742473|dbj|BAE99155.1| ras-related small GTP-binding protein-like [Arabidopsis thaliana]
gi|297310969|gb|EFH41393.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|332008100|gb|AED95483.1| RAB GTPase-1A [Arabidopsis thaliana]
Length = 202
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 125/206 (60%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+ YDVT E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQ 184
GNK D S++ V+ E A E FLE SAKN +V++ F + I + S
Sbjct: 120 GNKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAG 179
Query: 185 GSAVVKNQILKQKEVQESARGGNCCS 210
G+ QI Q Q+S CCS
Sbjct: 180 GAKPPTVQIRGQPVNQQSG----CCS 201
>gi|403413519|emb|CCM00219.1| predicted protein [Fibroporia radiculosa]
Length = 224
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 114/170 (67%), Gaps = 5/170 (2%)
Query: 15 KILLIGDSGVGKSSILLSLISNSV---HDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
K+LLIG+S VGKSS+LL + S TIGVDF++ + V GK++KL+IWDTAGQ
Sbjct: 14 KLLLIGNSSVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEVKGKKVKLSIWDTAGQ 73
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF T+TSSYYRGA GIILVYDV RE+F L W E+E Y + VKI+VGNKVD+
Sbjct: 74 ERFRTITSSYYRGAQGIILVYDVANRESFDALPR-WYSELETY-VSPSVVKIIVGNKVDK 131
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL 181
+ R V+ EG A+ LF E SAK + V++ F++++ KIL+ P L
Sbjct: 132 EFSRQVSHSEGQHFAERMNSLFFEASAKTSIGVREAFQEVVEKILDTPEL 181
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 128/201 (63%), Gaps = 6/201 (2%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKSS+LL ++ + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 35 DYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 94
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ ++ K+LVGNK
Sbjct: 95 GQERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQ-WLHEIDRYAA-ENVNKLLVGNKC 152
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D + +R VT E+G A FLE SAK + +V+Q F + +I +
Sbjct: 153 DLEGKRVVTTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQIKARMKNQPSAAPAT 212
Query: 190 KNQI-LKQKEVQESARGGNCC 209
K + L+ ++V++ GG CC
Sbjct: 213 KPGVNLRSQQVKK--EGGGCC 231
>gi|242057717|ref|XP_002458004.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
gi|241929979|gb|EES03124.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
Length = 203
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 127/205 (61%), Gaps = 4/205 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D R V+ E G LA E FLE SAK+ +V++ F + +I +
Sbjct: 120 GNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPAA 179
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
S + + Q Q ++ +CCS
Sbjct: 180 SGASRPATV-QMRGQPVSQQSSCCS 203
>gi|224138704|ref|XP_002326669.1| predicted protein [Populus trichocarpa]
gi|222833991|gb|EEE72468.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 126/209 (60%), Gaps = 13/209 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADGSYLDSYISTIGVDFKIRTVEQDGKTMKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI----LEVPSL 181
GNK D + + V+ E A E F+E SAKN+ +V+Q F + +I P++
Sbjct: 120 GNKSDLTANKVVSYETAKAFADEIGIPFIETSAKNSTNVEQAFMAMAAEIKNRMASQPAM 179
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCCS 210
V QI Q Q S CCS
Sbjct: 180 NNARPPTV--QIRGQPVNQNSG----CCS 202
>gi|50550177|ref|XP_502561.1| YALI0D08162p [Yarrowia lipolytica]
gi|49648429|emb|CAG80749.1| YALI0D08162p [Yarrowia lipolytica CLIB122]
Length = 202
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 126/204 (61%), Gaps = 4/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ L + GK +KL I
Sbjct: 2 NTEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTLELEGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT ++TF N+ + W E++ Y+T + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFNNVKT-WFHEIDRYAT-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V A FLE SAKN +V+Q F + +I E +
Sbjct: 120 GNKSDITDKKVVEYTVAKEFADSLGIPFLETSAKNATNVEQAFLTMARQIKERMGGAAEN 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+A N L+ + V + + +CC
Sbjct: 180 TAAKANVNLRGQNVSQGS-SSSCC 202
>gi|392588635|gb|EIW77967.1| ras-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 229
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 114/170 (67%), Gaps = 5/170 (2%)
Query: 15 KILLIGDSGVGKSSILLSLISN---SVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
K+LLIG++ VGKSS+LL + + TIGVDF++ + V G+++KL+IWDTAGQ
Sbjct: 20 KLLLIGNASVGKSSLLLRFSDEQWLPEDEATATIGVDFRVHKMEVNGRKVKLSIWDTAGQ 79
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF T+TSSYYRGA GIILVYDV+ RETF L W E+E Y + V+I+VGNK+D+
Sbjct: 80 ERFRTITSSYYRGAQGIILVYDVSNRETFEALPR-WFSEIETY-VSPTVVRIIVGNKLDK 137
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL 181
++ R V EG A+ LFLE SAK V++ F+D++ IL+ P L
Sbjct: 138 ENSRQVPTSEGAAFAERQDALFLEASAKTAVGVRETFEDVVRHILDTPEL 187
>gi|350538277|ref|NP_001233823.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053063|gb|AAA80678.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSRLLLRFADDSYLESYISTIGVDFKIRTVDQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V+ E A E F+E SAKN +V+Q F + I
Sbjct: 120 GNKCDLTAQKVVSTETAQAFADEIGIPFMETSAKNATNVEQAFMAMAASI 169
>gi|390979747|gb|AFM30910.1| small GTPase [Hevea brasiliensis]
Length = 203
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 127/209 (60%), Gaps = 13/209 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSL 181
GNK D + + V+ E A E F+E SAKN +V++ F D+ ++ P+
Sbjct: 120 GNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEEAFMAMAADIKNRMASQPAA 179
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCCS 210
V QI Q Q+S CCS
Sbjct: 180 NNARPPTV--QIRGQPVNQKSG----CCS 202
>gi|339237905|ref|XP_003380507.1| GTP-binding protein YPTC1 [Trichinella spiralis]
gi|316976620|gb|EFV59875.1| GTP-binding protein YPTC1 [Trichinella spiralis]
Length = 200
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 114/161 (70%), Gaps = 3/161 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
S+DY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL IWD
Sbjct: 2 SFDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIDLDGKTIKLQIWD 61
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+TSSYYRGAHGII+VYD++ +E+F N+ W E+E Y+ ++ K+LVGN
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIVVYDISDQESFNNVKQ-WLLEIERYAC-ENVNKLLVGN 119
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
K DR +ERAV + A + FLE SAKN+ +V+Q F
Sbjct: 120 KSDRTAERAVEYDTAKEYADQLGIPFLETSAKNSTNVEQAF 160
>gi|324506590|gb|ADY42810.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 202
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 128/204 (62%), Gaps = 4/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD+T +E+F N+ W +E++ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQ-WLQEIDRYAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D S+RAV A + FLE SAK++ +V+Q F + +I ++Q
Sbjct: 120 GNKCDLTSKRAVEYNSAKEYADQLGIPFLETSAKSSTNVEQAFLTMAAEIKNRMGPVQQA 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+I + V E GG CC
Sbjct: 180 GTGPSVRIGGSQPVNEKKTGG-CC 202
>gi|224001286|ref|XP_002290315.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220973737|gb|EED92067.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 127/204 (62%), Gaps = 5/204 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKSS+LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQ-WLHEIDRYAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + +R V+ E+G A FLE SAK + +V+Q F + +I + Q
Sbjct: 120 GNKCDLEGKRVVSTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQI--KARMKNQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
SA + Q+ + +CC
Sbjct: 178 SAAPATKPGVSLRSQQVKKDSSCC 201
>gi|260949313|ref|XP_002618953.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
gi|238846525|gb|EEQ35989.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
Length = 206
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
NN YDY FK+LLIGDSGVGKS +LL N+ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADNTYTQDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ V A+ FLE SA ++ +V+Q F + +I
Sbjct: 120 GNKADLSDKKVVEYTTAKEFAEALDIPFLETSALSSSNVEQAFYTMARQI 169
>gi|329185063|ref|NP_001002129.2| ras-related protein-like [Danio rerio]
gi|66911050|gb|AAH97013.1| Zgc:86773 protein [Danio rerio]
Length = 201
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS ILL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W KE++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQ-WLKEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + +I + G
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAEEIKKRMRPGASG 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+ + ++ VQ+S GG CC
Sbjct: 180 GSEKPDLKIESTPVQQS--GGGCC 201
>gi|4096662|gb|AAD10389.1| Rab1-like small GTP-binding protein [Petunia x hybrida]
Length = 202
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 132/210 (62%), Gaps = 17/210 (8%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YDY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ N+ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLSEIDRYA-NESVCKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSL 181
GNK D + V + G LA E FLE SAK++ +V+Q F ++ K+ P+
Sbjct: 120 GNKCDLVENKVVDTQTGKALADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQPAG 179
Query: 182 LEQ-GSAV-VKNQILKQKEVQESARGGNCC 209
++ GS V +K Q ++QK NCC
Sbjct: 180 AKKTGSTVQIKGQPIEQKS--------NCC 201
>gi|71019563|ref|XP_760012.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
gi|46099538|gb|EAK84771.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
Length = 209
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 136/210 (64%), Gaps = 9/210 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLT 64
N YD+ K+LLIGDSGVGKS +LL ++ PS TIG+DFKI+ + + GKR+KL
Sbjct: 3 NPHYDFLIKLLLIGDSGVGKSCLLLRFCDDA-WTPSFITTIGIDFKIRTIELDGKRIKLQ 61
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+T++YYRGA GI+LV+DVT +++F N+ + W +E +++ + KIL
Sbjct: 62 IWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRT-WHANIEQHAS-EGVSKIL 119
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPS 180
+GNK D + +RAVT E+G LA+E ++E SAK+ +V++ F +++ ++++ +
Sbjct: 120 IGNKSDWEEKRAVTTEQGEELAKELGIPYIETSAKSNSNVEEAFFNLAREVKTRLIDTAA 179
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCCS 210
+ + A + + A GG CCS
Sbjct: 180 VTQASPAAAAGNVNVNSAPKSGAAGGGCCS 209
>gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus]
Length = 202
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D + V+ E A E F+E SAKN +V+Q F + +I
Sbjct: 120 GNKCDLTENKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 169
>gi|299753665|ref|XP_001833414.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
gi|298410405|gb|EAU88348.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
Length = 204
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 123/201 (61%), Gaps = 3/201 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +TF+N+ W E++ Y++ + K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQ-WLSEIDRYAS-EGVNKLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D ++ V A + FLE SAKN +V+Q F + +I + S
Sbjct: 124 SDLTGKKVVEYSVAKEFADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPSGA 183
Query: 189 VKNQILKQKEVQESARGGNCC 209
K+ + + +S GG CC
Sbjct: 184 AKSSTVTPGQTVQSQTGGGCC 204
>gi|91079074|ref|XP_975225.1| PREDICTED: similar to Rab-protein 10 CG17060-PA [Tribolium
castaneum]
gi|270003655|gb|EFA00103.1| hypothetical protein TcasGA2_TC002919 [Tribolium castaneum]
Length = 203
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 134/207 (64%), Gaps = 6/207 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++GNK D +R V++E G +A+EH F+E SAK ++ + F DL IL+ + E
Sbjct: 119 ILGNKCDMSDKRTVSKERGETIAREHGIRFMETSAKANINIDKAFNDLAEAILDKTAGRE 178
Query: 184 QGSAVVKNQILKQKEVQESARGGNCCS 210
G V +++L ++ Q+S +CC+
Sbjct: 179 PGDHV--DRVLVDRK-QQSNTSRSCCN 202
>gi|1448941|gb|AAB04618.1| ypt-related protein [Brassica rapa subsp. campestris]
Length = 206
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 130/209 (62%), Gaps = 12/209 (5%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YDY FK+LLIGDS VGKS +LL ++ D TIGVDFKI+ + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T E+F N+ W E++ Y+ + C K+L+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQ-WLSEIDRYANDSVC-KLLI 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-----VPS 180
GNK D + V+ E G LA E FLE SAK++ +V+Q F + +I + +
Sbjct: 120 GNKNDMVESKVVSTETGKALADELGIPFLETSAKDSTNVEQAFLTIAGEIKKKMGSHTNA 179
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
GS V+ +K + +Q++ GG CC
Sbjct: 180 NKTSGSGTVQ---MKGQPIQQN-NGGGCC 204
>gi|297842904|ref|XP_002889333.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297335175|gb|EFH65592.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 123/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S V TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D R V E A E F+E SAK+ +V+Q F + I E + G
Sbjct: 120 GNKSDLTENRDVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAG 179
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+ + Q Q A+ CCS
Sbjct: 180 NNARPPTV--QIRGQPMAQKNGCCS 202
>gi|390339812|ref|XP_003725089.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Strongylocentrotus
purpuratus]
Length = 201
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 131/206 (63%), Gaps = 7/206 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ +L ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCLLFRFSDDTFSTTFISTIGIDFKIKTVELNGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T+ +TF N++ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAK-WLRNIQEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
L+GNK D D +R + ++ G +A+E+ F+E SAK +V+Q F L IL+ +
Sbjct: 119 LLGNKCDMDDKRMINKDRGETIAKENGIKFMETSAKANINVEQAFMTLAADILKKYPQRD 178
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
GS V +K+ S+ G CC
Sbjct: 179 TGSPGVVKPDMKEG----SSSGSKCC 200
>gi|115916189|ref|XP_788933.2| PREDICTED: ras-related protein Rab-10 isoform 2 [Strongylocentrotus
purpuratus]
Length = 224
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 132/205 (64%), Gaps = 11/205 (5%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDP----SPTIGVDFKIKLLTVGGKRLKLTI 65
YDY FK+L+IGDS VGK++ L+++ S P TIG+DFKIK + + GK++KL I
Sbjct: 27 YDYIFKVLVIGDSYVGKTA-LITIFSTGRASPYRDYQTTIGIDFKIKTVELNGKKIKLQI 85
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+T+SYYRGA GI+LVYD+T+ +TF N++ W + ++ ++ N+D K+L+
Sbjct: 86 WDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAK-WLRNIQEHA-NEDVEKMLL 143
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D D +R + ++ G +A+E+ F+E SAK +V+Q F L IL+ + G
Sbjct: 144 GNKCDMDDKRMINKDRGETIAKENGIKFMETSAKANINVEQAFMTLAADILKKYPQRDTG 203
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
S V +K+ S+ G CC
Sbjct: 204 SPGVVKPDMKEG----SSSGSKCCP 224
>gi|117939063|dbj|BAF36685.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 190
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 125/195 (64%), Gaps = 6/195 (3%)
Query: 16 ILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTAGQERF 74
+LLIGDSGVGKS +LL ++ TIGVDFKI+ + +GGK +KL IWDTAGQ+RF
Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYSGTYIATIGVDFKIRTIQIGGKVIKLQIWDTAGQDRF 60
Query: 75 GTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSE 134
T+TSSYYRGA+GII+VYDVT R++F N+ +W KE+E Y+T C ++LVGNK D ++
Sbjct: 61 RTITSSYYRGANGIIIVYDVTNRDSFNNV-QMWVKEIESYATEGVC-RLLVGNKCDLVNK 118
Query: 135 RAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVKNQIL 194
+ V G LA FLE SAKN +V+Q F+ + +I++ + G K ++L
Sbjct: 119 KVVDYNTGKQLADSFGISFLETSAKNATNVEQAFQTMATEIMKHTAPRNDGPIGTKVEVL 178
Query: 195 KQKEVQESARGGNCC 209
EV+ G CC
Sbjct: 179 PPSEVKSE---GGCC 190
>gi|224063625|ref|XP_002301234.1| predicted protein [Populus trichocarpa]
gi|222842960|gb|EEE80507.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 130/209 (62%), Gaps = 13/209 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE----VPSL 181
GNK D + + V+ E A E F+E SAK+ +V+Q F + I + P++
Sbjct: 120 GNKSDLTANKVVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAAAIKDRMASQPAM 179
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCCS 210
+ V+ L+ + V++ G CCS
Sbjct: 180 NNAKPSTVQ---LRGQPVEQK---GGCCS 202
>gi|346467655|gb|AEO33672.1| hypothetical protein [Amblyomma maculatum]
Length = 235
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 111/163 (68%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 57 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 116
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 117 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 174
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D + + V+ E G A E F+E AKN +V+Q F
Sbjct: 175 GNKSDLTANKVVSYETGKAFADEIGIPFMETGAKNATNVEQAF 217
>gi|321457381|gb|EFX68468.1| hypothetical protein DAPPUDRAFT_301441 [Daphnia pulex]
Length = 201
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 134/206 (65%), Gaps = 6/206 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ SYD FK+LLIGDSGVGK+ IL ++ + TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKSYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIELQGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T +TF N++ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITSVKTFDNIAK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++GNK D + +RAV++E+G ++A+EH F+E SAK +++ F +L IL E
Sbjct: 119 ILGNKCDVEDKRAVSKEKGEMIAREHGIRFMETSAKANINIESAFYELAQAILTKTCGRE 178
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
Q + + + + ++S R CC
Sbjct: 179 QAEPLDRVPLEGSRNDRQSNR---CC 201
>gi|440802525|gb|ELR23454.1| Rasrelated protein ORAB-1, putative [Acanthamoeba castellanii str.
Neff]
Length = 210
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 116/169 (68%), Gaps = 3/169 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YD+ FKIL++GDSGVGKSS+LL ++ D TIGVDFKI+ + + GK +K+ IWDT
Sbjct: 4 YDHLFKILMVGDSGVGKSSLLLRFTDDTFTDNFISTIGVDFKIRTVNLDGKVIKMQIWDT 63
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHG+ILVYDVT + +F N + W E+E Y+ + VK+LVGNK
Sbjct: 64 AGQERFRTITSSYYRGAHGVILVYDVTDQVSFNN-ARQWLTEIERYACG-NVVKLLVGNK 121
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
D S+R V+ G A + F+E SAK+ +VKQ F L+ ++ E
Sbjct: 122 SDLVSKRVVSTATGKEFADQFHLPFIEASAKDGSNVKQAFMTLVKEVYE 170
>gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 203
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 126/206 (61%), Gaps = 7/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ KILV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYASD-GVNKILV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL-EVPSLLEQ 184
GNK D + R V+ E A E FLE SAK+ +V+Q F + I + S
Sbjct: 120 GNKSDLTANRVVSYETAKAFADEIGIPFLETSAKDATNVEQAFMAMTSAIKNRMASQPAN 179
Query: 185 GSAVVKNQILKQKEVQESARGGNCCS 210
SA ++ + V +S G CCS
Sbjct: 180 NSAKPPTVNIRGQPVTQS---GGCCS 202
>gi|449431876|ref|XP_004133726.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 201
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 126/205 (61%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YDY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + V + A E FLE SAK++ +V+Q F + +I +
Sbjct: 120 GNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKKMGSQPTS 179
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
S N +K + +Q+ + +CCS
Sbjct: 180 SKSSGNVQMKGQPIQQKS---SCCS 201
>gi|391337937|ref|XP_003743320.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 131/206 (63%), Gaps = 6/206 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+ YDVT +E+F N+ W +E++ Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLE 183
GNK D +++ V A++ FLE SAK++ +V+Q FK + I+ P+ E
Sbjct: 123 GNKCDLTTKKVVDHSTAAEFAKQLDIPFLETSAKDSTNVEQAFKKMAEDIMARMGPAGGE 182
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
Q + + +I + V E +G CC
Sbjct: 183 QIKSQGEGKINPSRPV-EPNKGSGCC 207
>gi|302782443|ref|XP_002972995.1| rab family GTPase [Selaginella moellendorffii]
gi|302805428|ref|XP_002984465.1| rab family GTPase [Selaginella moellendorffii]
gi|300147853|gb|EFJ14515.1| rab family GTPase [Selaginella moellendorffii]
gi|300159596|gb|EFJ26216.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 115/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELEGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V + A E FLE SAKN +V+Q F + +I
Sbjct: 120 GNKADLTAKKVVDTQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|449458327|ref|XP_004146899.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
gi|449519234|ref|XP_004166640.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
Length = 201
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 17/210 (8%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSL 181
GNK D RAV+ E A E F+E SAK+ +V+Q F D+ ++ P+
Sbjct: 120 GNKCDL-PNRAVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASQPAN 178
Query: 182 LEQGSAV-VKNQILKQKEVQESARGGNCCS 210
+ V ++ Q + QK G CCS
Sbjct: 179 NARPPTVQLQGQPVNQK--------GGCCS 200
>gi|167524781|ref|XP_001746726.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774996|gb|EDQ88622.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 123/204 (60%), Gaps = 3/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYSETYISTIGVDFKIRTIELEGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E+E Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFDNVKQ-WLTEIERYAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D S++ V A E FLE SAK+ +V+Q F + +I
Sbjct: 120 GNKSDLQSKKQVDYTTAKAFADERGIPFLETSAKSATNVEQAFMTMASEIKARMGPAGAS 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+ K + + S+ GG CC
Sbjct: 180 NDTSKGTVSMKAGKPVSSGGGGCC 203
>gi|390594811|gb|EIN04220.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 272
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 114/179 (63%), Gaps = 5/179 (2%)
Query: 6 GNNSYDYSFKILLIGDSGVGKSSILLSLISN---SVHDPSPTIGVDFKIKLLTVGGKRLK 62
G+ + K+LLIG+S VGKSS LL + S TIGVDF++ + V GK++K
Sbjct: 5 GSGDAPINVKLLLIGNSSVGKSSFLLRFSDEQWLPEEEASATIGVDFRVHKMEVKGKKVK 64
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L+IWDTAGQERF T+TSSYYRGA GIIL+YDV+ RE+F L W E+E Y + K
Sbjct: 65 LSIWDTAGQERFRTITSSYYRGAQGIILMYDVSNRESFDALPR-WFSELETY-VSPSVAK 122
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL 181
I+VGNKVD++ R V EG AQ LF+E SAK V + F++L+ +I++ P L
Sbjct: 123 IIVGNKVDKEFSRQVATGEGAAFAQRMDSLFIEASAKTAVGVSEAFEELVERIMDTPEL 181
>gi|384247689|gb|EIE21175.1| GTP-binding protein YPTC1 [Coccomyxa subellipsoidea C-169]
Length = 202
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 115/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+ N++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYA-NENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V + A E FLE SAKN +V+Q F + +I
Sbjct: 120 GNKSDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|389743618|gb|EIM84802.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 228
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 114/174 (65%), Gaps = 5/174 (2%)
Query: 15 KILLIGDSGVGKSSILLSLISNSV---HDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
K+LLIG+S VGKSS+LL + S TIGVDF++ + V GK++KL+IWDTAGQ
Sbjct: 13 KLLLIGNSSVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMDVKGKKVKLSIWDTAGQ 72
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF T+TSSYYRGA GIILVYDV+ RE+F L W E+E Y + VKI+VGNKVD+
Sbjct: 73 ERFRTITSSYYRGAQGIILVYDVSNRESFDALPR-WFSELETY-VSSSVVKIIVGNKVDK 130
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
+ R V E A CLF+E SAK + V+ F++++ +IL+ P L +
Sbjct: 131 EYSRQVPTAEAEQFAARQNCLFVEASAKTSVGVRDAFRNVVAQILDTPELWDSA 184
>gi|218191283|gb|EEC73710.1| hypothetical protein OsI_08312 [Oryza sativa Indica Group]
Length = 206
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 123/201 (61%), Gaps = 5/201 (2%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL IWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 68
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ + K+LVGNK
Sbjct: 69 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNKS 126
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D + + V+ E A E F+E SAKN +V+Q F + I + + Q +A
Sbjct: 127 DLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKD--RMASQPAAAN 184
Query: 190 KNQILKQKEVQESARGGNCCS 210
Q Q + +CCS
Sbjct: 185 ARPPTVQIRGQPVNQKTSCCS 205
>gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti]
gi|108879268|gb|EAT43493.1| AAEL005069-PA [Aedes aegypti]
Length = 206
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 133/213 (62%), Gaps = 11/213 (5%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGK 59
M + + YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK
Sbjct: 1 MSASAMSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGK 60
Query: 60 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQD 119
+KL IWDTAGQERF T+TSSYYRGAHGII+VYD T +E+F N+ + W +E+E Y+ ++
Sbjct: 61 TIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKT-WLEEIERYAC-EN 118
Query: 120 CVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---L 176
K+LVGNK D +++ V M A + FLE SAKN +V+Q F + +I +
Sbjct: 119 VNKLLVGNKCDLQTKKVVDTTTAMEYANQLGIPFLETSAKNATNVEQAFMTMAAEIKNRV 178
Query: 177 EVPSLLEQGSAVVKNQILKQKEVQESARGGNCC 209
PS + + VK I K + V ES G CC
Sbjct: 179 GPPSSAAEAPSAVK--IDKSRSV-ESKSG--CC 206
>gi|340509040|gb|EGR34616.1| hypothetical protein IMG5_005710 [Ichthyophthirius multifiliis]
Length = 210
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 132/206 (64%), Gaps = 8/206 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIG+S VGKSS+LL N ++ PTIGVDFKI+ + GK +KL IWDT
Sbjct: 7 YDYLFKLLLIGNSSVGKSSLLLRFSDNIFNECFLPTIGVDFKIRTFDIQGKAVKLQIWDT 66
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYY+GAHGIILVYD+T R+TF ++ + W E + + N++ +K+LVGNK
Sbjct: 67 AGQERFKTITSSYYKGAHGIILVYDITDRQTFKDIDN-WLAEAD-KNANENVIKLLVGNK 124
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL---EVPSLLEQG 185
+D +++R V+ +EG LA F+E SA +V+ F L +I+ + S +G
Sbjct: 125 IDLENKRQVSFDEGKELADSLGIKFIETSALTASNVENAFVTLATEIISRVQKSSDNNKG 184
Query: 186 --SAVVKNQILKQKEVQESARGGNCC 209
A K +I +++ + G CC
Sbjct: 185 GNQASGKTRIRAGEDINNIKKQGGCC 210
>gi|87295018|gb|ABD36921.1| Rab1 [Pinus pinaster]
Length = 202
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 130/203 (64%), Gaps = 7/203 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL +S V TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYVGSYISTIGVDFKIRTIELDGKAIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT ++F N+ W E++ Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQ-WLSEIDKYASD-NVSKLLVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQGSA 187
D ++AV ++ A E FLE SAK+ +V+Q F + ++ + S L +G+
Sbjct: 123 CDLTEKQAVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQLTEGNR 182
Query: 188 VVKNQILKQKEVQESARGGNCCS 210
+K + +Q+ G CCS
Sbjct: 183 KANTVEMKGQPLQQK---GGCCS 202
>gi|16974365|gb|AAL31108.1| AT4g17530/dl4800c [Arabidopsis thaliana]
Length = 202
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/198 (48%), Positives = 122/198 (61%), Gaps = 4/198 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+ YDVT E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQ 184
GNK D S++ V+ E A E FLE SAKN +V++ F + I + S
Sbjct: 120 GNKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAG 179
Query: 185 GSAVVKNQILKQKEVQES 202
GS QI Q Q+S
Sbjct: 180 GSKPPTVQIRGQPVNQQS 197
>gi|168033669|ref|XP_001769337.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679443|gb|EDQ65891.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 134/217 (61%), Gaps = 9/217 (4%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGK 59
M ++ ++YDY K+LLIGDSGVGKS +LL +S TIG+DFKI+ + + K
Sbjct: 1 MATRARADNYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDNK 60
Query: 60 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQD 119
R+KL IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ +
Sbjct: 61 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-N 118
Query: 120 CVKILVGNKVDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYK 174
KILVGNK D D S+RAV +G LA E+ F E SAK +V+ F +D+ +
Sbjct: 119 VNKILVGNKADMDPSKRAVPFAKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKTR 178
Query: 175 ILEVPSLLEQGSAVVKNQI-LKQKEVQESARGGNCCS 210
+ E S E +A K + LK Q G+CCS
Sbjct: 179 LAESDSKPEAKNAGGKPDVTLKSGGAQPKPASGSCCS 215
>gi|452819428|gb|EME26487.1| Rab family, other [Galdieria sulphuraria]
Length = 203
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 127/205 (61%), Gaps = 4/205 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ ++ TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYNESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ + W E++ Y+ N+ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKT-WLHEIDRYA-NESVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAK +E+V+Q F + +I E + Q
Sbjct: 120 GNKNDLTTKKVVDTATAKEFADSLGIKFLETSAKTSENVEQAFITMAQEIKERMASQPQ- 178
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+ + I QE +CCS
Sbjct: 179 TQKTSSGIHVGANAQEVKESSSCCS 203
>gi|212275502|ref|NP_001130744.1| Ras protein RIC1 [Zea mays]
gi|194690000|gb|ACF79084.1| unknown [Zea mays]
gi|195605598|gb|ACG24629.1| ras-related protein RIC1 [Zea mays]
gi|195606872|gb|ACG25266.1| ras-related protein RIC1 [Zea mays]
gi|223942789|gb|ACN25478.1| unknown [Zea mays]
gi|413950363|gb|AFW83012.1| Ras protein RIC1 [Zea mays]
Length = 203
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 128/205 (62%), Gaps = 4/205 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D R V+ E G LA + FLE SAK+ +V++ F + +I +
Sbjct: 120 GNKCDLAENRVVSYEAGKALADDIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPAA 179
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
S + ++ + Q ++ +CCS
Sbjct: 180 SGASRPATVQMRG-QPVSQQSSCCS 203
>gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana plumbaginifolia]
Length = 203
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYASDS-VNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V+ E A E F+E SAKN +V+Q F + I
Sbjct: 120 GNKCDLTAQKVVSTETAQAFADEIGIPFMETSAKNATNVEQAFMAMAASI 169
>gi|225710014|gb|ACO10853.1| Ras-related protein ORAB-1 [Caligus rogercresseyi]
Length = 201
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 126/206 (61%), Gaps = 9/206 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +++F NL VW +E++ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNL-KVWLQEIDRYAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLE 183
GNK D +++ V A + FLE SAKN +V+Q F + +I P
Sbjct: 120 GNKCDLTTKKVVDYTTAKEYADQSSMPFLEASAKNATNVEQAFMTMAAEIKNTVGPPAPS 179
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
S VK + VQ S G CC
Sbjct: 180 GASGQVK---IDSTPVQ-SKSGSGCC 201
>gi|255581964|ref|XP_002531780.1| protein with unknown function [Ricinus communis]
gi|223528573|gb|EEF30594.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 127/209 (60%), Gaps = 13/209 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI----LEVPSL 181
GNK D + + V+ E A E F+E SAKN +V+Q F + +I P++
Sbjct: 120 GNKNDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAM 179
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCCS 210
V QI Q Q+S CCS
Sbjct: 180 NNARPPTV--QIRGQPVNQKSG----CCS 202
>gi|224074217|ref|XP_002304305.1| predicted protein [Populus trichocarpa]
gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa]
gi|222841737|gb|EEE79284.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 127/209 (60%), Gaps = 13/209 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI----LEVPSL 181
GNK D + + V+ E A E F+E SAKN +V+Q F + +I P++
Sbjct: 120 GNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAM 179
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCCS 210
V QI Q Q+S CCS
Sbjct: 180 NNARPPTV--QIRGQPVNQKSG----CCS 202
>gi|29841055|gb|AAP06068.1| similar to GenBank Accession Number S38340 membrane associated GTP
binding protein RAB18 in Caenorhabditis briggsae
[Schistosoma japonicum]
Length = 189
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 119/175 (68%), Gaps = 4/175 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVG-GKRLKLTIWDTAG 70
+FK+LLIGDSGVGKSS+L+ ++ S TIGVDFK+KL+TV G ++KL+IWDTAG
Sbjct: 11 NFKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKLVTVPDGTKIKLSIWDTAG 70
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT + YRG+H + VYDV RE+F NL + +E++ YS N + +K+LVGNK+D
Sbjct: 71 QERFRTLTPNVYRGSHAAVFVYDVANRESFDNL-KIRMEELKTYSDNPNMIKLLVGNKID 129
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
R ++REEG+ A+ + + E SAK +E V Q F D++ KI L QG
Sbjct: 130 -SVPRLISREEGLRFARLYNMPYAETSAKTSEGVNQLFSDIVTKIFNHSELWNQG 183
>gi|307105958|gb|EFN54205.1| GTP-binding protein yptV1 [Chlorella variabilis]
Length = 204
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 124/195 (63%), Gaps = 17/195 (8%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YD+ FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 7 YDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDT 66
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+V+DVT +E+F N+ W E++ Y+ N++ K+LVGNK
Sbjct: 67 AGQERFRTITSSYYRGAHGIIVVFDVTDQESFNNVKQ-WLNEIDRYA-NENVNKLLVGNK 124
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D S+R V A E F+E SAKN +V+Q F + +A
Sbjct: 125 TDLTSKRVVDFNTAKAFADEIGIPFIETSAKNASNVEQAFMTM--------------AAE 170
Query: 189 VKNQILKQKEVQESA 203
+KN++ ++ V +SA
Sbjct: 171 IKNRMAREPAVNKSA 185
>gi|367461227|gb|AEX14567.1| small GTP-binding protein [Dunaliella salina]
Length = 203
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 116/170 (68%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLDGKVVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TS YYRGAHGII+VYDVT E+F N+ + W E++ Y+ N++ K+LV
Sbjct: 62 WDTAGQERFRTITSGYYRGAHGIIVVYDVTDMESFNNVKT-WLNEIDRYA-NENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D S+RAV + A E FLE SAK++ +V+Q F + +I
Sbjct: 120 GNKNDLTSKRAVDYQTAKAFADEIGIPFLETSAKSSTNVEQAFMTMAAEI 169
>gi|268555746|ref|XP_002635862.1| C. briggsae CBR-RAB-1 protein [Caenorhabditis briggsae]
gi|308488626|ref|XP_003106507.1| CRE-RAB-1 protein [Caenorhabditis remanei]
gi|308253857|gb|EFO97809.1| CRE-RAB-1 protein [Caenorhabditis remanei]
Length = 205
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 128/204 (62%), Gaps = 4/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD+T +ETF N+ W +E++ Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ-WLQEIDRYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++RAV + A + FLE SAK++ +V+Q F + +I ++
Sbjct: 123 GNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGA 182
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+I + VQ+ G CC
Sbjct: 183 GGAPGVRITGSQPVQDKKSSG-CC 205
>gi|390598341|gb|EIN07739.1| GTP-binding protein ypt1 [Punctularia strigosozonata HHB-11173 SS5]
Length = 204
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 127/202 (62%), Gaps = 5/202 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +TFTN+ W +E++ Y++ + K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D S++ V A + FLE SAKN +V+Q F + +I + S
Sbjct: 124 SDLTSKKVVEYSVAKDFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTASGP 183
Query: 189 VK-NQILKQKEVQESARGGNCC 209
K + + + VQ+ A GG CC
Sbjct: 184 GKTSTVTPGQSVQQQASGG-CC 204
>gi|403222703|dbj|BAM40834.1| Ras-related protein Rab-1 [Theileria orientalis strain Shintoku]
Length = 220
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 119/176 (67%), Gaps = 6/176 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FKI++IGDSG GKSS+LL N+ + TIGVDFKIK + + +KL IWDT
Sbjct: 4 YDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDT 63
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TS+YYRGAHGII VYDVT + +F +++ W ++++ Y+T+ C K+L+GNK
Sbjct: 64 AGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITQTWLQDIDKYATSNVC-KLLIGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPS 180
+D R V+ EE +A+++ ++E SAK +V++ F K L ++ + PS
Sbjct: 123 IDLAENRVVSTEEAKHVAEQNNMNYIEASAKTDSNVEKAFITIAKALKDRVTQYPS 178
>gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500073|sp|Q39571.1|YPTC1_CHLRE RecName: Full=GTP-binding protein YPTC1
gi|806724|gb|AAA82727.1| YptC1 [Chlamydomonas reinhardtii]
gi|78522571|gb|ABB46195.1| YptC1 [Chlamydomonas incerta]
gi|158270765|gb|EDO96600.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 203
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 130/208 (62%), Gaps = 11/208 (5%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI----LEVPSL 181
GNK D S++ V A E FLE SAKN +V+Q F + +I P
Sbjct: 120 GNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIP 179
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCC 209
+ G VV+ Q + K + +++ +CC
Sbjct: 180 TKAGGPVVRPQ--EGKPI--NSKSSSCC 203
>gi|15233367|ref|NP_195311.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|75281787|sp|Q38922.1|RAB1B_ARATH RecName: Full=Ras-related protein RABB1b; Short=AtRABB1b; AltName:
Full=Ras-related protein GB2; Short=AtGB2; AltName:
Full=Ras-related protein Rab2C; Short=AtRab2C
gi|1184983|gb|AAA87883.1| ATGB2 [Arabidopsis thaliana]
gi|3805852|emb|CAA21472.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|7270538|emb|CAB81495.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|17529056|gb|AAL38738.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21436445|gb|AAM51423.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21553875|gb|AAM62968.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|332661181|gb|AEE86581.1| GTP-binding protein GB2 [Arabidopsis thaliana]
Length = 211
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 119/172 (69%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SYDY FK ++IGD+GVGKS +LL VHD TIGV+F +++TV G+ +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTVDGRPIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++ ++ N + +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMSIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +RAV++EEG A+EH LFLE SA+ ++V++ F + KIL+
Sbjct: 118 GNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQ 169
>gi|290980783|ref|XP_002673111.1| rab family small GTPase [Naegleria gruberi]
gi|284086692|gb|EFC40367.1| rab family small GTPase [Naegleria gruberi]
Length = 212
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 123/188 (65%), Gaps = 10/188 (5%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++ + GK++KL I
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIDGKQVKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L++ W ++ +S N +LV
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFHHLTT-WLEDARRHS-NSTMTIMLV 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D DS RAV+ EEG AQ+H +FLE SAKN E+V++ F Y + +E+G
Sbjct: 118 GNKCDLDSRRAVSYEEGKKFAQQHDLIFLETSAKNDENVEEAFN---YTARIINEKIEKG 174
Query: 186 SAVVKNQI 193
V N++
Sbjct: 175 IIDVTNEM 182
>gi|170094132|ref|XP_001878287.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646741|gb|EDR10986.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 204
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 126/201 (62%), Gaps = 3/201 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YD+ FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT E+FT++ W +E++ Y++ + K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDNESFTHVKQ-WLQEIDRYAS-EGVNKLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D S++ V A + FLE SAKN +V+Q F + +I + S
Sbjct: 124 SDLTSKKVVEYSVAKEFADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMGSSSTPSGA 183
Query: 189 VKNQILKQKEVQESARGGNCC 209
K+ + + +S + G+CC
Sbjct: 184 AKSSTVTPGQTVQSQQSGSCC 204
>gi|340374081|ref|XP_003385567.1| PREDICTED: ras-related protein Rab-1A-like [Amphimedon
queenslandica]
Length = 209
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 131/208 (62%), Gaps = 9/208 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 4 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVELDGKTIKLQI 63
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGA+GII+V+DVT +E+F+N+ VW +E++ Y++ C K++V
Sbjct: 64 WDTAGQERFRTITSSYYRGANGIIIVFDVTDQESFSNV-KVWLQEIDRYASTNVC-KLMV 121
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV----PSL 181
GNK D +++ V A + FLE SAKN +V+Q F + +I +V P+
Sbjct: 122 GNKCDLTNKKVVDFTTAKEFADQLSIPFLETSAKNATNVEQAFMTMAAEIKKVQGNEPAP 181
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCC 209
G VK I + + +++ G C
Sbjct: 182 GGGGGTNVK--ITQSQPIKDKPNSGGGC 207
>gi|357122771|ref|XP_003563088.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 125/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +++F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +R V+ E A E F+E SAKN +V+Q F + I + + Q
Sbjct: 120 GNKCDLTDKRVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A Q Q + +CCS
Sbjct: 178 AANNARPATVQIRGQPVEQKTSCCS 202
>gi|359318893|ref|XP_848769.2| PREDICTED: ras-related protein Rab-18 isoform 2 [Canis lupus
familiaris]
Length = 236
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 124/203 (61%), Gaps = 35/203 (17%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIW---- 66
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IW
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWFLFW 66
Query: 67 --------------------------DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETF 100
TAGQERF TLT SYYRGA G+ILVYDVTRR+TF
Sbjct: 67 GCKLLIYSTYSSSYYSSLYFGQEKKVGTAGQERFRTLTPSYYRGAPGVILVYDVTRRDTF 126
Query: 101 TNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKN 160
L + W E+E Y T D V +LVGNK+D+++ R V R EG+ A++H LF+E SAK
Sbjct: 127 VKLDN-WLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKT 184
Query: 161 TEDVKQCFKDLLYKILEVPSLLE 183
+ V+ F++L+ KI++ P L E
Sbjct: 185 CDGVQCAFEELVEKIIQTPGLWE 207
>gi|321256350|ref|XP_003193368.1| ras-related protein ypt1 [Cryptococcus gattii WM276]
gi|317459838|gb|ADV21581.1| ras-related protein ypt1, putative [Cryptococcus gattii WM276]
gi|405119560|gb|AFR94332.1| GTP-binding protein ypt1 [Cryptococcus neoformans var. grubii H99]
Length = 205
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 126/203 (62%), Gaps = 6/203 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT R+T+TN+ W +E++ Y+ + K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQ-WLQEIDRYAV-EGVNKLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLEQGS 186
D +++ V E A E FLE SAKN +V+Q F + +I + S + G
Sbjct: 124 SDLATKKVVEYAEAKAFADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGSSTMASGP 183
Query: 187 AVVKNQILKQKEVQESARGGNCC 209
K+ I + E G CC
Sbjct: 184 G-AKSTIKGLGQNVEQKTAGGCC 205
>gi|255730689|ref|XP_002550269.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
gi|240132226|gb|EER31784.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
Length = 207
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
NN YDY FK+LLIGDSGVGKSS+LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSSLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ V A FLE SA ++ +V+Q F + +I
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|1370162|emb|CAA66447.1| RAB1A [Lotus japonicus]
gi|388504068|gb|AFK40100.1| unknown [Lotus japonicus]
Length = 201
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 125/204 (61%), Gaps = 6/204 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YDY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELQGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + V + A E FLE SAK++ +V+Q F + +I + G
Sbjct: 120 GNKSDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTG 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
S + +K + + + + NCC
Sbjct: 180 SKSAETVQMKGQPIPQKS---NCC 200
>gi|206553|gb|AAA42006.1| ras protein [Rattus norvegicus]
Length = 205
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 130/205 (63%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN ++V+Q F + +I + +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNEKNVEQSFMTMAAEIKKRMGPGATA 182
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S GG CC
Sbjct: 183 GGAEKSNVKIQSTPVKQS--GGGCC 205
>gi|4758988|ref|NP_004152.1| ras-related protein Rab-1A isoform 1 [Homo sapiens]
gi|6679587|ref|NP_033022.1| ras-related protein Rab-1A [Mus musculus]
gi|45433570|ref|NP_112352.2| ras-related protein Rab-1A [Rattus norvegicus]
gi|55741705|ref|NP_001003153.1| ras-related protein Rab-1A [Canis lupus familiaris]
gi|381140057|ref|NP_001244201.1| RAB1A, member RAS oncogene family [Macaca mulatta]
gi|149727528|ref|XP_001493347.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Equus
caballus]
gi|291386694|ref|XP_002709883.1| PREDICTED: RAB1A, member RAS oncogene family isoform 1 [Oryctolagus
cuniculus]
gi|296223703|ref|XP_002757737.1| PREDICTED: ras-related protein Rab-1A-like [Callithrix jacchus]
gi|301784597|ref|XP_002927708.1| PREDICTED: ras-related protein Rab-1A-like [Ailuropoda melanoleuca]
gi|332813296|ref|XP_530454.3| PREDICTED: ras-related protein Rab-1A isoform 3 [Pan troglodytes]
gi|344283860|ref|XP_003413689.1| PREDICTED: ras-related protein Rab-1A-like [Loxodonta africana]
gi|348563536|ref|XP_003467563.1| PREDICTED: ras-related protein Rab-1A-like [Cavia porcellus]
gi|354471845|ref|XP_003498151.1| PREDICTED: ras-related protein Rab-1A-like [Cricetulus griseus]
gi|395731755|ref|XP_002812010.2| PREDICTED: ras-related protein Rab-1A [Pongo abelii]
gi|395829763|ref|XP_003788014.1| PREDICTED: ras-related protein Rab-1A [Otolemur garnettii]
gi|397521755|ref|XP_003830953.1| PREDICTED: ras-related protein Rab-1A [Pan paniscus]
gi|402891075|ref|XP_003908785.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|402891077|ref|XP_003908786.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|403260564|ref|XP_003922736.1| PREDICTED: ras-related protein Rab-1A [Saimiri boliviensis
boliviensis]
gi|410954918|ref|XP_003984106.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Felis catus]
gi|51338603|sp|P62820.3|RAB1A_HUMAN RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338604|sp|P62821.3|RAB1A_MOUSE RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338716|sp|Q6NYB7.3|RAB1A_RAT RecName: Full=Ras-related protein Rab-1A
gi|51338790|sp|P62822.3|RAB1A_CANFA RecName: Full=Ras-related protein Rab-1A
gi|2144600|pir||TVDGYP GTP-binding protein Rab1 - dog
gi|6969622|gb|AAF33844.1|AF226873_1 small GTP-binding protein RAB1A [Mus musculus]
gi|20379034|gb|AAM21077.1|AF498929_1 small GTP binding protein RAB1A [Homo sapiens]
gi|55457|emb|CAA68284.1| unnamed protein product [Mus musculus]
gi|550060|gb|AAA60240.1| GTP-binding protein [Homo sapiens]
gi|763158|emb|CAA33760.1| GTP-binding protein [Mus musculus]
gi|6006435|emb|CAB56775.1| rab1 [Canis lupus familiaris]
gi|12654175|gb|AAH00905.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|26329917|dbj|BAC28697.1| unnamed protein product [Mus musculus]
gi|33096735|emb|CAE11872.1| hypothetical protein [Homo sapiens]
gi|37515280|gb|AAH02077.3| RAB1, member RAS oncogene family [Mus musculus]
gi|44890248|gb|AAH66662.1| RAB1, member RAS oncogene family [Rattus norvegicus]
gi|49168464|emb|CAG38727.1| RAB1A [Homo sapiens]
gi|54695926|gb|AAV38335.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|54695928|gb|AAV38336.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|61355917|gb|AAX41190.1| RAB1A member RAS oncogene family [synthetic construct]
gi|61355926|gb|AAX41191.1| RAB1A member RAS oncogene family [synthetic construct]
gi|74147521|dbj|BAE38660.1| unnamed protein product [Mus musculus]
gi|74189058|dbj|BAE39292.1| unnamed protein product [Mus musculus]
gi|74197039|dbj|BAE35072.1| unnamed protein product [Mus musculus]
gi|112292935|dbj|BAF02845.1| Rab1A [Mus musculus]
gi|119620324|gb|EAW99918.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119620328|gb|EAW99922.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|120419448|gb|ABM21543.1| RAB1A, member RAS oncogene family [Bos taurus]
gi|123994817|gb|ABM85010.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|148675882|gb|EDL07829.1| RAB1, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149044748|gb|EDL97934.1| rCG23301, isoform CRA_b [Rattus norvegicus]
gi|159906367|gb|ABX10872.1| RAB1A [Capra hircus]
gi|189054895|dbj|BAG37879.1| unnamed protein product [Homo sapiens]
gi|190689469|gb|ACE86509.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|190690831|gb|ACE87190.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|307685159|dbj|BAJ20510.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|355562769|gb|EHH19363.1| hypothetical protein EGK_20053 [Macaca mulatta]
gi|380783935|gb|AFE63843.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|380783937|gb|AFE63844.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|383420425|gb|AFH33426.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|384948550|gb|AFI37880.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|410220890|gb|JAA07664.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410220892|gb|JAA07665.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308940|gb|JAA33070.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308942|gb|JAA33071.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308944|gb|JAA33072.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410350819|gb|JAA42013.1| RAB1A, member RAS oncogene family [Pan troglodytes]
Length = 205
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 182
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S GG CC
Sbjct: 183 GGAEKSNVKIQSTPVKQS--GGGCC 205
>gi|388511969|gb|AFK44046.1| unknown [Lotus japonicus]
Length = 202
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 124/205 (60%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + K +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + RAV+ E A E F+E SAK+ +V+Q F + I +
Sbjct: 120 GNKSDLTANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKNRMASQPAN 179
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A + K V +S+ CCS
Sbjct: 180 NARPPTVNISGKPVGQSS---GCCS 201
>gi|417408915|gb|JAA50989.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 237
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 37 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 96
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 97 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 154
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 155 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 214
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S GG CC
Sbjct: 215 GGAEKSNVKIQSTPVKQS--GGGCC 237
>gi|67470746|ref|XP_651336.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537429|dbj|BAB40669.1| small GTPase Rab1A [Entamoeba histolytica]
gi|56468058|gb|EAL45948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449708204|gb|EMD47708.1| small GTPase Rab1A, putative [Entamoeba histolytica KU27]
Length = 205
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 110/159 (69%), Gaps = 3/159 (1%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL ++ D TIGVDFKIK + + GK +KL IWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNVKLQIWDTA 65
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGA GII+VY V +TF N+ W +E+E Y++ + +K+L+GNK
Sbjct: 66 GQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQ-WLQEIERYAS-ETVIKLLIGNKC 123
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D D ERAVT E+G LA F+E SAK + +V + F
Sbjct: 124 DLDDERAVTVEQGQELANSLNVSFMEASAKKSLNVDELF 162
>gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene family [synthetic construct]
Length = 206
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 182
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S GG CC
Sbjct: 183 GGAEKSNVKIQSTPVKQS--GGGCC 205
>gi|74826761|sp|Q9TVU5.1|RAB1_THEPA RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1; Short=TpRab1
gi|5764095|gb|AAD51132.1|AF107762_1 small GTP-binding protein rab1 [Theileria parva]
gi|5764097|gb|AAD51133.1|AF107763_1 small GTP-binding protein rab1 [Theileria parva]
Length = 220
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 119/176 (67%), Gaps = 6/176 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FKI++IGDSG GKSS+LL N+ + TIGVDFKIK + + +KL IWDT
Sbjct: 4 YDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDT 63
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TS+YYRGAHGII VYDVT + +F +++ W ++++ Y+T+ C K+L+GNK
Sbjct: 64 AGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPS 180
+D R V+ +E +A+++ ++E SAK +V++ F K L K+ + PS
Sbjct: 123 IDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPS 178
>gi|440907831|gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos grunniens mutus]
Length = 246
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 46 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 105
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 106 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 163
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 164 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 223
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S GG CC
Sbjct: 224 GGAEKSNVKIQSTPVKQS--GGGCC 246
>gi|392567328|gb|EIW60503.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 204
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 128/205 (62%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+ YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 3 TSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQI 62
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +TFTN+ W +E++ Y++ + K+LV
Sbjct: 63 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLV 120
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D S++ V A + FLE SAKN +V+Q F + +I +
Sbjct: 121 GNKSDLTSKKVVEYSVAKEFADQLGIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTTTA 180
Query: 186 SAVVKNQ-ILKQKEVQESARGGNCC 209
+ K+ I + VQ+ A GG CC
Sbjct: 181 AGTGKSSTITPGQTVQQQAAGG-CC 204
>gi|410077807|ref|XP_003956485.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS 2517]
gi|372463069|emb|CCF57350.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS 2517]
Length = 212
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 133/213 (62%), Gaps = 12/213 (5%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIG+SGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRG+HGII+VYDVT +E+F N +W +E++ Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATSA-VLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE--VPSLLE 183
GNK D D +R V + A+ + FLE SA ++ +V++ F + +I E ++
Sbjct: 120 GNKCDLDGKRMVEYDVAKEFAESNNMPFLETSALDSTNVEEAFLTMARQIKESFAQQKIQ 179
Query: 184 QGSAVVKNQILKQKEVQESARG-------GNCC 209
GS N L+ + + G NCC
Sbjct: 180 DGSNANANSNLQNDKSNVNLNGQSLTNATNNCC 212
>gi|307214891|gb|EFN89759.1| Ras-related protein Rab-18 [Harpegnathos saltator]
Length = 223
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 115/175 (65%), Gaps = 3/175 (1%)
Query: 14 FKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDTAGQE 72
KIL+IG+S VGKSSILL + ++ T+G+D+K K +++ G +KL IWDTAGQE
Sbjct: 10 LKILMIGESNVGKSSILLRFTEDEFYENMQSTVGMDYKTKQISIDGNIVKLAIWDTAGQE 69
Query: 73 RFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRD 132
RF TLT SYYR G IL+YDVT R TF L + W E+ Y D VK++VGNK+D
Sbjct: 70 RFRTLTPSYYRDGQGAILMYDVTDRNTFVKLET-WLNELNTYCNKTDIVKMVVGNKIDL- 127
Query: 133 SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
R V+ EEG+ A+ H+ L++E SAK + VK CF++L+ KI++ P L + SA
Sbjct: 128 PNREVSTEEGLQFARRHQTLYIESSAKTADGVKCCFEELVQKIIQTPGLWDTHSA 182
>gi|338721465|ref|XP_001494344.3| PREDICTED: ras-related protein Rab-18-like [Equus caballus]
Length = 248
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 113/168 (67%), Gaps = 4/168 (2%)
Query: 18 LIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAGQERFG 75
L G++ LL ++ DP + TIGVDFK+K ++V G + KL IWDTAGQERF
Sbjct: 54 LPGEACSSSEEGLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFR 113
Query: 76 TLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSER 135
TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D+++ R
Sbjct: 114 TLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKIDKEN-R 171
Query: 136 AVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 172 EVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 219
>gi|357122765|ref|XP_003563085.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 125/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +++F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V+ E A E F+E SAKN +V+Q F + I + + Q
Sbjct: 120 GNKSDLTDKKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A Q Q + +CCS
Sbjct: 178 AANNARPATVQIRGQPVEQKASCCS 202
>gi|242794469|ref|XP_002482380.1| Rab GTPase SrgA, putative [Talaromyces stipitatus ATCC 10500]
gi|218718968|gb|EED18388.1| Rab GTPase SrgA, putative [Talaromyces stipitatus ATCC 10500]
Length = 206
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 128/208 (61%), Gaps = 6/208 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSF-TPSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
IL+GNK D + +RAVT E+G LA E FLE SAKN +V + F L +I +V
Sbjct: 119 ILIGNKCDWEEKRAVTTEQGQKLADELGIPFLEVSAKNNINVDKAFYSLASEIKKVMDST 178
Query: 183 EQGSAVVKNQILKQKEVQESAR-GGNCC 209
+ A + + Q + GG CC
Sbjct: 179 KSEQAGTQGVNIDQHNAGSNGNLGGKCC 206
>gi|261188123|ref|XP_002620478.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
gi|239593353|gb|EEQ75934.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
Length = 205
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 128/207 (61%), Gaps = 5/207 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSF-TPSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
+L+GNK D + +RAV+ E+G LA E FLE SAKN +V++ F L I +V
Sbjct: 119 MLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTT 178
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
+ A + + + + GG CC
Sbjct: 179 KSEQAGSQGVTIDHQGAGQGNLGGKCC 205
>gi|367000740|ref|XP_003685105.1| hypothetical protein TPHA_0D00270 [Tetrapisispora phaffii CBS 4417]
gi|357523403|emb|CCE62671.1| hypothetical protein TPHA_0D00270 [Tetrapisispora phaffii CBS 4417]
Length = 207
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 124/179 (69%), Gaps = 3/179 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIG+SGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRG+HGII+VYDVT +E+F N +W +E++ Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NSVKMWLQEIDRYATST-VLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
GNK D +R V + A+++K FLE SA ++ +V++ F + +I E S +Q
Sbjct: 120 GNKSDMTDKRVVEYDVAKEFAEQNKMPFLETSALDSTNVEEAFLTMARQIKESISHQQQ 178
>gi|115464323|ref|NP_001055761.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|47900325|gb|AAT39172.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579312|dbj|BAF17675.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|215767251|dbj|BAG99479.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767268|dbj|BAG99496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767288|dbj|BAG99516.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196931|gb|EEC79358.1| hypothetical protein OsI_20237 [Oryza sativa Indica Group]
gi|222631859|gb|EEE63991.1| hypothetical protein OsJ_18820 [Oryza sativa Japonica Group]
Length = 216
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 129/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V+Q F +D+ ++ E S E
Sbjct: 130 ADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKPE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + N+ Q + +A G CC
Sbjct: 190 DKTIKINNKT-DQGADKPAASGSACC 214
>gi|168049674|ref|XP_001777287.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162671389|gb|EDQ57942.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 134/217 (61%), Gaps = 9/217 (4%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGK 59
M ++ ++YDY K+LLIGDSGVGKS +LL +S TIG+DFKI+ + + K
Sbjct: 1 MATRARADNYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDNK 60
Query: 60 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQD 119
R+KL IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ +
Sbjct: 61 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-N 118
Query: 120 CVKILVGNKVDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYK 174
KILVGNK D D S+RAV +G LA E+ F E SAK +V+ F +D+ +
Sbjct: 119 VNKILVGNKADMDPSKRAVPFAKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKTR 178
Query: 175 ILEVPSLLEQGSAVVKNQI-LKQKEVQESARGGNCCS 210
+ E S + +A K + L Q+ G+CCS
Sbjct: 179 LAESDSKPDAKNAAGKPDVKLTPGGAQQKPASGSCCS 215
>gi|340503618|gb|EGR30169.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 210
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 131/209 (62%), Gaps = 14/209 (6%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIG+S VGKSS+LL N ++ PTIGVDFKI+ + GK +KL IWDT
Sbjct: 7 YDYLFKLLLIGNSSVGKSSLLLRFSDNIFNECFLPTIGVDFKIRTFDIQGKAVKLQIWDT 66
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYY+GAHGIILVYD+T R+TF ++ + W E + + N++ VK+LVGNK
Sbjct: 67 AGQERFKTITSSYYKGAHGIILVYDITDRQTFKDIDN-WLAEAD-KNANENVVKLLVGNK 124
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ---- 184
+D +++R V+ +EG LA F+E SA +V+ F L E+ S +++
Sbjct: 125 IDLENKRQVSFDEGKELADSLGIKFIETSALTANNVENAFVTL---ATEIKSRVQKTTDN 181
Query: 185 ----GSAVVKNQILKQKEVQESARGGNCC 209
+ K +I +++ + G CC
Sbjct: 182 KNNNAAGQGKTKIKAGEDINKKKSQGGCC 210
>gi|17737369|ref|NP_523419.1| Rab10 [Drosophila melanogaster]
gi|194893373|ref|XP_001977864.1| GG19277 [Drosophila erecta]
gi|195345923|ref|XP_002039518.1| GM23016 [Drosophila sechellia]
gi|195482026|ref|XP_002101878.1| GE17866 [Drosophila yakuba]
gi|2317272|dbj|BAA21744.1| Rab10 [Drosophila melanogaster]
gi|7295615|gb|AAF50924.1| Rab10 [Drosophila melanogaster]
gi|16648398|gb|AAL25464.1| LD39986p [Drosophila melanogaster]
gi|190649513|gb|EDV46791.1| GG19277 [Drosophila erecta]
gi|194134744|gb|EDW56260.1| GM23016 [Drosophila sechellia]
gi|194189402|gb|EDX02986.1| GE17866 [Drosophila yakuba]
gi|220946172|gb|ACL85629.1| Rab10-PA [synthetic construct]
gi|220955946|gb|ACL90516.1| Rab10-PA [synthetic construct]
Length = 204
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/208 (42%), Positives = 134/208 (64%), Gaps = 6/208 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++GNK D +R V +E G +A+EH F+E SAK+ ++++ F +L IL+ S E
Sbjct: 119 ILGNKCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRE 178
Query: 184 QGSAVVKNQILKQKEVQESARG-GNCCS 210
SA + +++ + QE A G CC+
Sbjct: 179 --SAENQERVIIDRRNQEKAPGYSKCCA 204
>gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens]
Length = 257
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 57 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 116
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 117 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 174
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 175 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 234
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S GG CC
Sbjct: 235 GGAEKSNVKIQSTPVKQS--GGGCC 257
>gi|341885115|gb|EGT41050.1| hypothetical protein CAEBREN_19821 [Caenorhabditis brenneri]
gi|341885137|gb|EGT41072.1| hypothetical protein CAEBREN_20077 [Caenorhabditis brenneri]
Length = 201
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 128/207 (61%), Gaps = 8/207 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ YD FK+LLIGDSGVGK+ IL ++ + TIG+DFKIK + + GK++KL
Sbjct: 1 MARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + ++ +++ +D VK+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL-EVPSLL 182
++GNK D R V+RE G +AQ+H F E SAK V F DL IL ++P
Sbjct: 119 ILGNKCDMSDRRVVSRERGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAILAKMPDST 178
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
E+ S N + + Q + G CC
Sbjct: 179 EEQSRDTVNPV----QPQRTGGSGGCC 201
>gi|194762816|ref|XP_001963530.1| GF20241 [Drosophila ananassae]
gi|190629189|gb|EDV44606.1| GF20241 [Drosophila ananassae]
Length = 204
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 134/208 (64%), Gaps = 6/208 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELQGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++GNK D +R V +E G +A+EH F+E SAK+ ++++ F +L IL+ S E
Sbjct: 119 ILGNKCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNTNIEEAFCELAQAILDKTSGRE 178
Query: 184 QGSAVVKNQILKQKEVQESARGGN-CCS 210
SA + +++ + + A G N CC+
Sbjct: 179 --SAENQERVIIDRRNNDKAPGYNKCCA 204
>gi|66811592|ref|XP_639975.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74854016|sp|Q54NU2.1|RAB1D_DICDI RecName: Full=Ras-related protein Rab-1D
gi|60466912|gb|EAL64956.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 204
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 117/178 (65%), Gaps = 10/178 (5%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
+D+ FKILLIGDSGVGKS +LL +S D TIGVDFKIK L + GK +KL IWDT
Sbjct: 7 HDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDT 66
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGA GIILVYD T +++FTN+ W E++ Y+ ++ K+LVGNK
Sbjct: 67 AGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQ-WMGEIDRYAC-ENVNKLLVGNK 124
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF-------KDLLYKILEVP 179
D +E+ V + A+ + F+E SAKN +V++CF K+ L I E P
Sbjct: 125 TDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLADIQETP 182
>gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148230336|ref|NP_001080138.1| RAB1A, member RAS oncogene family [Xenopus laevis]
gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus laevis]
gi|49250530|gb|AAH74522.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 204
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 127/204 (62%), Gaps = 5/204 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + +I +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATA 182
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
KN ++ V++S+ G CC
Sbjct: 183 GGQEKNVKIQSTPVKQSS--GGCC 204
>gi|413923309|gb|AFW63241.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
Length = 272
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 122/201 (60%), Gaps = 5/201 (2%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL IWDTA
Sbjct: 75 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 134
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ + K+LVGNK
Sbjct: 135 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNKS 192
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D + + V E A E F+E SAKN +V+Q F + I + + Q +A
Sbjct: 193 DLTANKVVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASIKD--RMASQPAAAN 250
Query: 190 KNQILKQKEVQESARGGNCCS 210
Q Q + +CCS
Sbjct: 251 ARPATVQIRGQPVNQKTSCCS 271
>gi|392579393|gb|EIW72520.1| hypothetical protein TREMEDRAFT_26769 [Tremella mesenterica DSM
1558]
Length = 187
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 115/177 (64%), Gaps = 5/177 (2%)
Query: 6 GNNSYDYSFKILLIGDSGVGKSSILLSLISNSV---HDPSPTIGVDFKIKLLTVGGKRLK 62
G+ S KILL+G+S VGKSS+LL + D TIGVDFK+ L V K+ K
Sbjct: 7 GDEESPISIKILLVGNSSVGKSSLLLRFTEDDFLADEDTIATIGVDFKVTRLEVDEKKYK 66
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF TLT+SYYRGA G++LVYD+T R+TF L W +E++ Y + VK
Sbjct: 67 LAIWDTAGQERFRTLTASYYRGAQGVVLVYDMTSRKTFDELLR-WDRELDTYCGDS-IVK 124
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVP 179
+++GNK D+ R VT EEG A+ LF+ECSAK E +++ F++L+ K+ +P
Sbjct: 125 LILGNKADKSLARQVTTEEGKAFAESLGALFMECSAKTNEGIEEAFRELVRKVSGIP 181
>gi|156087613|ref|XP_001611213.1| Rab1b [Babesia bovis]
gi|32492050|gb|AAP85297.1| Rab1b [Babesia bovis]
gi|154798467|gb|EDO07645.1| Rab1b [Babesia bovis]
Length = 221
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 113/163 (69%), Gaps = 2/163 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FKI++IGDSG GKSS+LL ++ + TIGVDFKIK + + +KL IWDT
Sbjct: 4 YDYLFKIIIIGDSGAGKSSLLLRFADDTYSESYMSTIGVDFKIKTVKIDNVTIKLQIWDT 63
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TS+YYRGAHGII VYDVT R +F ++ W ++E YS+ + K+L+GNK
Sbjct: 64 AGQERFRTITSTYYRGAHGIITVYDVTSRVSFESVKKTWLVDIEKYSS-ANISKLLIGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDL 171
VD + RAVT +E A+++ ++E SAK ++V++ F+ +
Sbjct: 123 VDLEDSRAVTYDEAREFAEQNNMDYIEASAKTAQNVEKAFESI 165
>gi|389749024|gb|EIM90201.1| GTP-binding protein ypt1 [Stereum hirsutum FP-91666 SS1]
Length = 204
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 127/207 (61%), Gaps = 15/207 (7%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +TFTN+ W +E++ Y++ + K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE------VPSLL 182
D S++ V A + FLE SAKN +V+Q F + +I + PS
Sbjct: 124 SDLTSKKVVEYSVAKEFADQLTIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPSGT 183
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
+ S + Q ++Q++ CC
Sbjct: 184 GKSSTITPGQTVQQQQ------ASGCC 204
>gi|58261356|ref|XP_568088.1| ras-related protein ypt1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115607|ref|XP_773517.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256143|gb|EAL18870.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230170|gb|AAW46571.1| ras-related protein ypt1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 205
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 126/203 (62%), Gaps = 6/203 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT R+T+TN+ W +E++ Y+ + K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQ-WLQEIDRYAV-EGVNKLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLEQGS 186
D +++ V E A E FLE SAKN +V+Q F + +I + S + G
Sbjct: 124 SDLATKKVVEYAEAKSFADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGSSTMASGP 183
Query: 187 AVVKNQILKQKEVQESARGGNCC 209
K+ I + E G CC
Sbjct: 184 G-AKSTIKGLGQNVEQKTAGGCC 205
>gi|340502771|gb|EGR29423.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 207
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 130/203 (64%), Gaps = 5/203 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTIWDT 68
YD + KIL+IG+S VGK+ +++ N ++ TIGVDFK K L + K +KL IWDT
Sbjct: 6 YDITLKILIIGNSNVGKTCMVMRYCENQFTNEFYATIGVDFKTKNLQIDDKIIKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQ+RF T+T++YYRGA+GI++VYD+T R++F N+ W E+E + ++ KILVGNK
Sbjct: 66 AGQDRFRTITNNYYRGANGILIVYDITDRDSFQNVKQ-WMYEIEK-NAKENVQKILVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE--QGS 186
D++ +R V EEG+ L+Q++ F E SAKN+ +++ F+ L+ I+E + QG
Sbjct: 124 CDQNDQRQVDYEEGLHLSQQYNLTFFEASAKNSHNIELSFQTLVKNIVEKGGFPQKHQGL 183
Query: 187 AVVKNQILKQKEVQESARGGNCC 209
+ +N KQ E+ NCC
Sbjct: 184 KIGRNYNQKQVEINRPQTQKNCC 206
>gi|391337939|ref|XP_003743321.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 131/205 (63%), Gaps = 6/205 (2%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIW 66
+ YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IW
Sbjct: 6 DQYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVKLQIW 65
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+TSSYYRGAHGII+ YDVT +E+F N+ W +E++ Y+ ++ K+LVG
Sbjct: 66 DTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVG 123
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLEQ 184
NK D +++ V A++ FLE SAK++ +V+Q FK + I+ P+ EQ
Sbjct: 124 NKCDLTTKKVVDHSTAAEFAKQLDIPFLETSAKDSTNVEQAFKKMAEDIMARMGPAGGEQ 183
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
+ + +I + V E +G CC
Sbjct: 184 IKSQGEGKINPSRPV-EPNKGSGCC 207
>gi|213401875|ref|XP_002171710.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
gi|211999757|gb|EEB05417.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
Length = 200
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 130/207 (62%), Gaps = 9/207 (4%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
+ SYDY K+LLIGDSGVGKS +LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 1 MATKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRIK 59
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+L+YDVT ++F N+ + W VE +++ ++ K
Sbjct: 60 LQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDEKSFENIRT-WFSNVEQHAS-ENVFK 117
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
IL+GNK D + +R VT E+G LA+E FLE SAK +V + F L +I +
Sbjct: 118 ILIGNKCDCEEQRQVTYEQGQALAEELGIKFLEASAKTNVNVDEAFFTLAREIKKQKIDA 177
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
EQ S+ + I ++ S CC
Sbjct: 178 EQESSAQASNI----DLSSSRNSKRCC 200
>gi|167391072|ref|XP_001739628.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896634|gb|EDR23985.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 206
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 114/168 (67%), Gaps = 3/168 (1%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL ++ D TIGVDFKIK + + GK +KL IWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNVKLQIWDTA 65
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGA GII+VY V +TF N+ W +E+E Y++ + +K+L+GNK
Sbjct: 66 GQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQ-WLQEIERYAS-ETVIKLLIGNKC 123
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
D + ERAVT E+G LA F+E SAK + +V + F + I++
Sbjct: 124 DLEDERAVTVEQGQELANSLNVSFMEASAKKSLNVDELFNKIATDIMK 171
>gi|229596300|ref|XP_001011511.3| Ras family protein [Tetrahymena thermophila]
gi|225565488|gb|EAR91266.3| Ras family protein [Tetrahymena thermophila SB210]
gi|307777758|dbj|BAJ21275.1| Rab-family small GTPase Rab1B [Tetrahymena thermophila]
Length = 212
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTIWDT 68
YD+ FK++LIG+SGVGKS +L+ N+ + TIGVDFKIK + + GK++KL IWDT
Sbjct: 13 YDHLFKLVLIGNSGVGKSCMLMRYAENTFTQNFYNTIGVDFKIKTINLQGKQIKLQIWDT 72
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQ+RF T+T++YYRGAHGI++VYDVT + +F N+ + W E+E Y+ C K+L+GNK
Sbjct: 73 AGQDRFKTITTNYYRGAHGIVVVYDVTDKLSFENVKT-WMSEIEKYAQENVC-KLLIGNK 130
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL 176
D +R V+ EEG LA K F+E SAKN+ ++ F+ + +L
Sbjct: 131 SDLSDKRVVSTEEGQQLASSLKIKFIETSAKNSNNIDSAFESMAQDVL 178
>gi|391343074|ref|XP_003745839.1| PREDICTED: ras-related protein Rab-10-like [Metaseiulus
occidentalis]
Length = 204
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 130/206 (63%), Gaps = 4/206 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ H TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELHGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T + +F N++ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNQRSFENIAK-WLRYIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++GNK D + +R +++++G +A++H FLE SAK ++++ F L IL+ +
Sbjct: 119 ILGNKCDMELKRVISKDKGEAIARDHNISFLETSAKANINIEEAFTQLAEAILQKQTSGR 178
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
A I + A G NCC
Sbjct: 179 AVDAATSGGI-NVGPRERPALGANCC 203
>gi|75077202|sp|Q4R8X3.1|RAB1B_MACFA RecName: Full=Ras-related protein Rab-1B
gi|67967932|dbj|BAE00448.1| unnamed protein product [Macaca fascicularis]
Length = 201
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT RE++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM---AAEIKKRMGPG 176
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+A + LK GG CC
Sbjct: 177 AASGGERPNLKIDSTPVKPAGGGCC 201
>gi|17509233|ref|NP_491857.1| Protein RAB-10 [Caenorhabditis elegans]
gi|351062741|emb|CCD70773.1| Protein RAB-10 [Caenorhabditis elegans]
Length = 201
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 129/207 (62%), Gaps = 8/207 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ YD FK+LLIGDSGVGK+ IL ++ + TIG+DFKIK + + GK++KL
Sbjct: 1 MARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + ++ +++ +D VK+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL-EVPSLL 182
++GNK D R V+RE G +AQ+H F E SAK V F DL IL ++P
Sbjct: 119 ILGNKCDMSDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILAKMPDST 178
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
++ S N + Q++ + G CC
Sbjct: 179 DEQSRDTVNPVQPQRQ----SSSGGCC 201
>gi|346467487|gb|AEO33588.1| hypothetical protein [Amblyomma maculatum]
Length = 228
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 111/167 (66%), Gaps = 3/167 (1%)
Query: 3 SKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRL 61
S N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +
Sbjct: 35 SPAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTI 94
Query: 62 KLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCV 121
KL IWDTAGQERF T+TSSYYRGAHGII+VYDVT +++F N+ W E++ Y++ ++
Sbjct: 95 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVN 152
Query: 122 KILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
K+LVGNK D + + V+ E G A E F+E SAKN +V F
Sbjct: 153 KLLVGNKCDLTANKVVSYETGKAFADEIGIPFMETSAKNATNVXHAF 199
>gi|303748|dbj|BAA02115.1| GTP-binding protein [Pisum sativum]
gi|738939|prf||2001457G GTP-binding protein
Length = 201
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 126/204 (61%), Gaps = 6/204 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YDY FK+L+IGDS VGKS +LL +S D TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEYDYLFKLLIIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQ-WLHEIDRYANDSVC-KLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + V + A E FLE SAK++ +V+Q F + +I + G
Sbjct: 120 GNKCDLTENKVVQTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSG 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
S ++ +K + + ++ NCC
Sbjct: 180 SKSAESVQMKGQPIPQN---NNCC 200
>gi|145248582|ref|XP_001400630.1| GTP-binding protein ypt2 [Aspergillus niger CBS 513.88]
gi|11558647|emb|CAC17832.1| secretion related GTPase, (SrgA) [Aspergillus niger]
gi|134081297|emb|CAK41800.1| secretion related GTPase srgA-Aspergillus niger
gi|350639164|gb|EHA27518.1| hypothetical protein ASPNIDRAFT_210814 [Aspergillus niger ATCC
1015]
Length = 206
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 10/210 (4%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDL---LYKILEVP 179
IL+GNK D + +RAV+ E+G LA E FLE SAKN ++++ F DL + K ++
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINIEKAFYDLASDIKKGMDTS 178
Query: 180 SLLEQGSAVVKNQILKQKEVQESARGGNCC 209
+ GS V I +Q + GG CC
Sbjct: 179 KSEQVGSQGVS--IDQQGSGLNGSAGGKCC 206
>gi|440911147|gb|ELR60860.1| Ras-related protein Rab-18, partial [Bos grunniens mutus]
Length = 174
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 118/178 (66%), Gaps = 7/178 (3%)
Query: 33 LISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIIL 90
+ ++ DP + TIGVDFK+K ++V G + KL IWDTAGQERF TLT SYYRGA G+IL
Sbjct: 1 MFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVIL 60
Query: 91 VYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHK 150
VYDVTRR+TF L + W E+E Y T D V +LVGNK+D+++ V R EG+ A++H
Sbjct: 61 VYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKIDKENHE-VDRNEGLKFARKHS 118
Query: 151 CLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVKNQILKQKEVQESARGGNC 208
LF+E SAK + V+ F++L+ KI++ P L E + +N+ +K +E GG C
Sbjct: 119 MLFIEESAKTCDGVQCAFEELVEKIIQTPGLWESEN---QNKGVKLTHREEGQGGGAC 173
>gi|428672259|gb|EKX73173.1| Ras-related protein Rab1b small GTP-binding protein [Babesia equi]
Length = 220
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 110/160 (68%), Gaps = 2/160 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FKI++IGDSG GKSS+LL N+ + TIGVDFKIK + + +KL IWDT
Sbjct: 4 YDYLFKIIVIGDSGCGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNITIKLQIWDT 63
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TS+YYRGAHGII VYDVT + +F +++ W ++E Y+T+ + K+L+GNK
Sbjct: 64 AGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLTDIERYATS-NVSKLLIGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
+D R VT EE +A+ H ++E SAK +V++ F
Sbjct: 123 IDLADNRVVTSEEAKQVAEAHNMNYIEASAKTDSNVEKAF 162
>gi|209882520|ref|XP_002142696.1| Ras family protein SEC4 [Cryptosporidium muris RN66]
gi|209558302|gb|EEA08347.1| Ras family protein SEC4, putative [Cryptosporidium muris RN66]
Length = 215
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 109/160 (68%), Gaps = 3/160 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSP-TIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LL+GDS VGKSS+LL N + TIGVDFK K++ + GK+LKL +WDT
Sbjct: 9 YDYLIKLLLLGDSAVGKSSLLLRFCENKFENSFVLTIGVDFKSKIIELNGKKLKLQVWDT 68
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T +Y+R A G+ILVYD+T ETF NL S W K +E Y+ N + KILVGNK
Sbjct: 69 AGQERFRTITPAYFRSAMGVILVYDITNIETFNNL-SYWMKNLEEYA-NINVQKILVGNK 126
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D +S+R V+ + G LAQE+K F E SAK V + F
Sbjct: 127 CDLNSQRQVSEQRGKELAQEYKIPFFETSAKLDSSVTEAF 166
>gi|428184966|gb|EKX53820.1| hypothetical protein GUITHDRAFT_150303 [Guillardia theta CCMP2712]
Length = 200
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 131/208 (62%), Gaps = 14/208 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
++ YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ L + GK +KL I
Sbjct: 2 SSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+ N K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WMNEIDRYA-NDKVNKMLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSL 181
GNK D S+RAV A FLE SAK++ +V+Q F ++ ++ + P+
Sbjct: 120 GNKSDLASKRAVDTSVAKEYADSLGIPFLETSAKDSTNVEQAFITMAAEIKARMAQAPAG 179
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCC 209
E GSA + Q+ K EV + CC
Sbjct: 180 KE-GSASI--QVGKGSEVTKKG----CC 200
>gi|350418387|ref|XP_003491843.1| PREDICTED: ras-related protein Rab-18-like [Bombus impatiens]
Length = 223
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 115/172 (66%), Gaps = 3/172 (1%)
Query: 14 FKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDTAGQE 72
K+L+IG+S VGKSSILL + H+ T+G+D++ K +T+ G +KL IWDTAGQE
Sbjct: 9 LKLLMIGESNVGKSSILLRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLAIWDTAGQE 68
Query: 73 RFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRD 132
RF TLT SYYR G ILVYDVT R TF L + W E+ Y D +K++VGNK+D
Sbjct: 69 RFRTLTPSYYRDGQGAILVYDVTDRVTFMKLET-WLNELNTYCNKTDIIKMVVGNKIDLP 127
Query: 133 SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
+ R V+ EEG+ A+ H+ L++E SAK + +K CF++L+ KI++ P L ++
Sbjct: 128 N-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGLWDR 178
>gi|239609095|gb|EEQ86082.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis ER-3]
gi|327356417|gb|EGE85274.1| GTP-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 205
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 128/207 (61%), Gaps = 5/207 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSF-TPSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
+L+GNK D + +RAV+ E+G LA E FLE SAKN +V++ F L I +V
Sbjct: 119 MLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTN 178
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
+ A + + + + GG CC
Sbjct: 179 KSEQAGSQGVTIDHQGAGQGNLGGKCC 205
>gi|169784109|ref|XP_001826516.1| GTP-binding protein ypt2 [Aspergillus oryzae RIB40]
gi|83775261|dbj|BAE65383.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868528|gb|EIT77742.1| GTP-binding protein [Aspergillus oryzae 3.042]
Length = 206
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 132/210 (62%), Gaps = 10/210 (4%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVP 179
IL+GNK D + +RAV+ E+G LA E FLE SAKN ++++ F +L +I ++
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEIKKGMDTS 178
Query: 180 SLLEQGSAVVKNQILKQKEVQESARGGNCC 209
+ GS V I +Q + GG CC
Sbjct: 179 KSEQPGSQGVS--IDQQGPGPNGSTGGKCC 206
>gi|340726562|ref|XP_003401625.1| PREDICTED: ras-related protein Rab-18-like [Bombus terrestris]
Length = 223
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 115/172 (66%), Gaps = 3/172 (1%)
Query: 14 FKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDTAGQE 72
K+L+IG+S VGKSSILL + H+ T+G+D++ K +T+ G +KL IWDTAGQE
Sbjct: 9 LKLLMIGESNVGKSSILLRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLAIWDTAGQE 68
Query: 73 RFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRD 132
RF TLT SYYR G ILVYDVT R TF L + W E+ Y D +K++VGNK+D
Sbjct: 69 RFRTLTPSYYRDGQGAILVYDVTDRVTFMKLET-WLNELNTYCNKTDIIKMVVGNKIDLP 127
Query: 133 SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
+ R V+ EEG+ A+ H+ L++E SAK + +K CF++L+ KI++ P L ++
Sbjct: 128 N-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGLWDR 178
>gi|154272996|ref|XP_001537350.1| GTP-binding protein SAS1 [Ajellomyces capsulatus NAm1]
gi|150415862|gb|EDN11206.1| GTP-binding protein SAS1 [Ajellomyces capsulatus NAm1]
gi|225555103|gb|EEH03396.1| GTP-binding protein SAS1 [Ajellomyces capsulatus G186AR]
Length = 205
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 127/207 (61%), Gaps = 5/207 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSF-TPSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
+L+GNK D + +RAVT E+G LA E FLE SAKN +V++ F L I +V
Sbjct: 119 MLIGNKCDWEEKRAVTTEQGQKLADELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTT 178
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
+ A + + + GG CC
Sbjct: 179 KSEQAGSQGVTIDHQGSGAGNLGGKCC 205
>gi|399163153|gb|AFP33152.1| rab-10, partial [Caenorhabditis elegans]
Length = 200
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 128/202 (63%), Gaps = 8/202 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YD FK+LLIGDSGVGK+ IL ++ + TIG+DFKIK + + GK++KL IWDT
Sbjct: 5 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + ++ +++ +D VK+++GNK
Sbjct: 65 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKMILGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL-EVPSLLEQGSA 187
D R V+RE G +AQ+H F E SAK V F DL IL ++P ++ S
Sbjct: 123 CDMSDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILAKMPDSTDEQSR 182
Query: 188 VVKNQILKQKEVQESARGGNCC 209
N + Q++ + G CC
Sbjct: 183 DTVNPVQPQRQ----SSSGGCC 200
>gi|167536047|ref|XP_001749696.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771844|gb|EDQ85505.1| predicted protein [Monosiga brevicollis MX1]
Length = 219
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 134/220 (60%), Gaps = 24/220 (10%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTIW 66
Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++++ K++KL IW
Sbjct: 4 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVSIDNKQIKLQIW 61
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V IL+G
Sbjct: 62 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARSHS-NPNMVIILIG 119
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILE----- 177
NK D DS+RAVTREEG A+E+ +F+E SAKN +V++ F + + KI E
Sbjct: 120 NKTDLDSKRAVTREEGEQFARENGLIFMETSAKNATNVEEAFIQTAQAIYSKIQENVFDI 179
Query: 178 --------VPSLLEQGSAVVKNQILKQKEVQESARGGNCC 209
V L G+ + + ++ ++ GG CC
Sbjct: 180 KNEMNGIKVGPQLAGGAGSTRLDLRAPQQKPTNSEGGGCC 219
>gi|154416464|ref|XP_001581254.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736312|gb|AAX97485.1| small Rab GTPase RabX8 [Trichomonas vaginalis]
gi|121915480|gb|EAY20268.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 207
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 129/205 (62%), Gaps = 11/205 (5%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
YD+ FKI+L+GDSGVGK++I+ H+ PTIGV+F+ K + + K++KL IWDTA
Sbjct: 8 YDFQFKIILLGDSGVGKTAIITRYCKELFHEQDPTIGVNFQQKYIEINNKKIKLAIWDTA 67
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQE+F T+T +YR G ILVYD+T +++ +L S+W E+ T+ DC ++VGNK
Sbjct: 68 GQEKFRTITRQFYRKVDGAILVYDLTDKKSLEDLESLWIPELNSNVTS-DCQMLIVGNKC 126
Query: 130 D--RDSE---RAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
D D E + VT+EE +A++H LF+E SAK+ E V+Q F++L+ +++E P E+
Sbjct: 127 DLKEDPEYKDKIVTKEEAENVARKHATLFVESSAKSNEGVQQAFEELVTRLVEKPRTHEE 186
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
+A Q + + S G CC
Sbjct: 187 DAAET-----VQIDPKNSPSQGWCC 206
>gi|307189424|gb|EFN73834.1| Ras-related protein Rab-18 [Camponotus floridanus]
Length = 224
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 114/175 (65%), Gaps = 3/175 (1%)
Query: 14 FKILLIGDSGVGKSSILLSLISNSV-HDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQE 72
KIL+IG+S VGKSSILL + + T+G+D+K K +T+ G +KL IWDTAGQE
Sbjct: 10 LKILIIGESNVGKSSILLRFTEDEFCENMQSTVGMDYKTKQITIDGNTVKLAIWDTAGQE 69
Query: 73 RFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRD 132
RF TLT SYYR G IL+YDVT R TF L + W E+ Y D VK++VGNK+D
Sbjct: 70 RFRTLTPSYYRDGQGAILMYDVTDRNTFVKLET-WLNELNTYCNRTDIVKMVVGNKIDLP 128
Query: 133 SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
+ R V+ EEG+ A+ H+ L++E SAK + VK CF++L+ KI++ P L + S
Sbjct: 129 N-REVSTEEGLQFARRHQTLYIESSAKTADGVKCCFEELVQKIIQTPGLWDTHST 182
>gi|393231749|gb|EJD39338.1| GTP-binding protein ypt1 [Auricularia delicata TFB-10046 SS5]
Length = 204
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 123/203 (60%), Gaps = 3/203 (1%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIW 66
+ YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IW
Sbjct: 4 SEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIW 63
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+TSSYYRGAHGII+VYDVT +TFTN+ W +E++ Y++ + K+LVG
Sbjct: 64 DTAGQERFRTITSSYYRGAHGIIVVYDVTDMDTFTNVKQ-WLQEIDRYAS-EGVNKLLVG 121
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
NK D +++ V A + FLE SAKN +V+Q F + +I +
Sbjct: 122 NKSDLTAKKVVEYGAAKEFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGATSTSQ 181
Query: 187 AVVKNQILKQKEVQESARGGNCC 209
K + + + GG CC
Sbjct: 182 GTGKGVTVTAGQSVQQQSGGGCC 204
>gi|51468996|emb|CAH17998.1| RAB1-like [Poa pratensis]
Length = 203
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 125/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +++F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V+ E A E F+E SAKN +V+Q F + I + + Q
Sbjct: 120 GNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A Q Q + +CCS
Sbjct: 178 AANNARPATVQIRGQPVEQKTSCCS 202
>gi|327505561|gb|AEA92308.1| Rab4 [Hevea brasiliensis]
Length = 202
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 124/204 (60%), Gaps = 5/204 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YDY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + V + A E FLE SAK++ +V+Q F + +I + + Q
Sbjct: 120 GNKCDLVDNKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKK--KMGSQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+A Q + Q + NCC
Sbjct: 178 AASKSTGTTVQMKGQPIQQKNNCC 201
>gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus]
Length = 205
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAG+ERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGEERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 182
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S GG CC
Sbjct: 183 GGAEKSNVKIQSTPVKQS--GGGCC 205
>gi|407039382|gb|EKE39614.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 205
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 110/159 (69%), Gaps = 3/159 (1%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL ++ D TIGVDFKIK + + GK +KL IWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNIKLQIWDTA 65
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGA GII+VY V +TF N+ W +E+E Y++ + +K+L+GNK
Sbjct: 66 GQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQ-WLQEIERYAS-ETVIKLLIGNKC 123
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D + ERAVT E+G LA F+E SAK + +V + F
Sbjct: 124 DLEDERAVTVEQGQELANSLNVSFMEASAKKSLNVDELF 162
>gi|303272717|ref|XP_003055720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463694|gb|EEH60972.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 123/201 (61%), Gaps = 17/201 (8%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLEGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+ N++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYA-NENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V + A E FLE SAKN +V++ F +
Sbjct: 120 GNKSDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEEAFMKM-------------- 165
Query: 186 SAVVKNQILKQKEVQESARGG 206
+ +KN++ Q + +G
Sbjct: 166 AGEIKNRMASQPALNNGPKGA 186
>gi|24306110|gb|AAN52527.1|AF454544_2 GTP-binding protein [Ogataea angusta]
gi|24795513|gb|AAN64444.1|AF346820_1 GTP-binding protein [Ogataea angusta]
gi|320583918|gb|EFW98131.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 203
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 111/163 (68%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
NN YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N++ W +E++ Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVNQ-WLQEIDRYATS-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D ++ V A FLE SA + +V+Q F
Sbjct: 120 GNKCDLTDKKVVDYAVAKEFADSRGIKFLETSASQSTNVEQAF 162
>gi|145515201|ref|XP_001443500.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834479|emb|CAI44558.1| rab_A52 [Paramecium tetraurelia]
gi|124410889|emb|CAK76103.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 128/210 (60%), Gaps = 3/210 (1%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGK 59
M + + YD+ K+++IGDSGVGK++IL T+GVDFKIK + V GK
Sbjct: 1 MSKQANSQDYDWLVKVIVIGDSGVGKTNILSQFCDAKFSITHMATLGVDFKIKTIDVDGK 60
Query: 60 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQD 119
+LKL IWDTAGQERF +T +YY+GA G+IL Y V R++F N+ W + ++ + + D
Sbjct: 61 KLKLQIWDTAGQERFRNITKTYYKGAQGVILTYSVIDRQSFQNVDG-WLRSIQENTNSSD 119
Query: 120 CVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVP 179
+LVGNK D +ER VT EEG ++Q++ F E SAK+ ++ + F +L ++I++
Sbjct: 120 VQLVLVGNKADMSAERQVTLEEGKKMSQQYNIPFFETSAKSNMNINEAFNNLAFRIIQTL 179
Query: 180 SLLEQGSAVVKNQILKQKEVQESARGGNCC 209
S + Q + +N LK E ++ + +CC
Sbjct: 180 SKM-QTNEEKQNLNLKPSEGKDKPKSESCC 208
>gi|226472644|emb|CAX71008.1| Rab-protein 8 [Schistosoma japonicum]
Length = 197
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 124/204 (60%), Gaps = 9/204 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +L+ S + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPDYDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGA GII+VY VT + +F N+ S W +E+E Y+ N ++LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAQGIIIVY-VTDKTSFINVKS-WLQEIEHYA-NSTVNRLLV 118
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D RAV + M A+EH+ FLE SAK +V+ F ++ +I + ++
Sbjct: 119 GNKCDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTAPMQSM 178
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
S+ V Q + G CC
Sbjct: 179 SSNV-----TVNSTQPVTKSGGCC 197
>gi|119179533|ref|XP_001241343.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303320893|ref|XP_003070441.1| Ras family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240110137|gb|EER28296.1| Ras family protein [Coccidioides posadasii C735 delta SOWgp]
gi|320033061|gb|EFW15010.1| GTP-binding protein SAS1 [Coccidioides posadasii str. Silveira]
gi|392866739|gb|EAS30086.2| GTP-binding protein ypt2 [Coccidioides immitis RS]
Length = 205
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 127/207 (61%), Gaps = 5/207 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + +GGKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSF-TPSFITTIGIDFKIRTIDLGGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
+L+GNK D + +RAV+ E+G LA E FLE SAKN +V + F L +I +V
Sbjct: 119 MLIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINVDKAFYTLASEIKKVMDTS 178
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
+ + N + Q + CC
Sbjct: 179 KAEQSASHNVSIDQGTGSGTGLANKCC 205
>gi|197127906|gb|ACH44404.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 130/205 (63%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 182
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ +V++S+ G CC
Sbjct: 183 GGAEKSNVKIQSTKVKQSS--GGCC 205
>gi|195331895|ref|XP_002032634.1| GM20894 [Drosophila sechellia]
gi|194124604|gb|EDW46647.1| GM20894 [Drosophila sechellia]
Length = 200
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 127/191 (66%), Gaps = 10/191 (5%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D DS R V +EEG A+EH +F+E SA+ +V++ F + +I E +++G
Sbjct: 118 GNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEK---IQEG 174
Query: 186 SAVVKNQILKQ 196
+ N++ K+
Sbjct: 175 VFDINNEVRKK 185
>gi|326914865|ref|XP_003203743.1| PREDICTED: ras-related protein Rab-1A-like [Meleagris gallopavo]
Length = 231
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 131/209 (62%), Gaps = 6/209 (2%)
Query: 3 SKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRL 61
++ G YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +
Sbjct: 27 TEAGKGFYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI 86
Query: 62 KLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCV 121
KL IWDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++
Sbjct: 87 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVN 144
Query: 122 KILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPS 180
K+LVGNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 145 KLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGP 204
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S+ G CC
Sbjct: 205 GATAGGAEKSNVKIQSTPVKQSS--GGCC 231
>gi|290982368|ref|XP_002673902.1| rab family small GTPase [Naegleria gruberi]
gi|284087489|gb|EFC41158.1| rab family small GTPase [Naegleria gruberi]
Length = 203
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 116/170 (68%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +++F+N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTMTSSYYRGAHGIIIVYDVTDQDSFSNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D S++ V R A+ FLE SAK + +V+Q F + +I
Sbjct: 120 GNKCDLTSKKQVDRSTAEEFAKSLNIPFLETSAKISTNVEQAFMTMAAEI 169
>gi|302692268|ref|XP_003035813.1| small GTP-binding protein [Schizophyllum commune H4-8]
gi|300109509|gb|EFJ00911.1| small GTP-binding protein [Schizophyllum commune H4-8]
Length = 203
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 123/204 (60%), Gaps = 3/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+ YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 HTEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +TFTN+ W +E++ Y++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V A + FLE SAKN +V+Q F + +I +
Sbjct: 120 GNKSDLTGKKVVEYTVAKEFADQLAIPFLETSAKNATNVEQAFLTMAKQIKDRMGSSSAA 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
K+ + + +GG CC
Sbjct: 180 PGAGKSSTITPGQSVNQQQGGGCC 203
>gi|297798332|ref|XP_002867050.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
gi|297312886|gb|EFH43309.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 118/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SYDY FK ++IGD+GVGKS +LL VHD TIGV+F +++TV G+ +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTVDGRPIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++ ++ N + +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMSIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +RAV++EEG A+EH LFLE SA+ ++V++ F KIL+
Sbjct: 118 GNKCDLAHKRAVSKEEGEQFAKEHGLLFLEASARTAQNVEEAFIKTAAKILQ 169
>gi|224057960|ref|XP_002299410.1| predicted protein [Populus trichocarpa]
gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa]
gi|222846668|gb|EEE84215.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 122/202 (60%), Gaps = 5/202 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D + + V+ E A E F+E SAKN +V+Q F + I + Q +A
Sbjct: 123 SDLTANKVVSYETAKAFADEIGIPFMETSAKNAINVEQAFMAMAADIKN--RMASQPAAN 180
Query: 189 VKNQILKQKEVQESARGGNCCS 210
Q Q + CCS
Sbjct: 181 NARPPTVQIRGQPVNQNTGCCS 202
>gi|325092195|gb|EGC45505.1| GTP-binding protein [Ajellomyces capsulatus H88]
Length = 205
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 127/207 (61%), Gaps = 5/207 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSF-TPSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
+L+GNK D + +RAVT E+G LA E FLE SAKN +V++ F L I +V
Sbjct: 119 MLIGNKCDWEEKRAVTTEQGQKLADELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTT 178
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
+ A + + + GG CC
Sbjct: 179 KSEQAGSQGVTIDHQGSGVGNLGGKCC 205
>gi|85001490|ref|XP_955461.1| small GTP-binding protein Rab1 [Theileria annulata strain Ankara]
gi|74951238|sp|Q4UB16.1|RAB1_THEAN RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1
gi|65303607|emb|CAI75985.1| small GTP-binding protein Rab1, putative [Theileria annulata]
Length = 220
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 118/176 (67%), Gaps = 6/176 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FKI++IGDSG GKSS+LL N+ + TIGVDFKIK + + +KL IWDT
Sbjct: 4 YDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDT 63
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TS+YYRGAHGII VYDVT + +F +++ W ++++ Y+T+ C K+L+GNK
Sbjct: 64 AGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPS 180
+D R V +E +A+++ ++E SAK +V++ F K L K+ + PS
Sbjct: 123 IDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPS 178
>gi|341886829|gb|EGT42764.1| hypothetical protein CAEBREN_29398 [Caenorhabditis brenneri]
Length = 201
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 127/200 (63%), Gaps = 4/200 (2%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 5 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 64
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYD+T +ETF N+ W +E++ Y+ ++ K+LVGNK
Sbjct: 65 GQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ-WLQEIDRYAC-ENVNKLLVGNKC 122
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D ++RAV + A + FLE SAK++ +V+Q F + +I ++
Sbjct: 123 DLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGAGGAP 182
Query: 190 KNQILKQKEVQESARGGNCC 209
+I + VQ+ GG CC
Sbjct: 183 GVRITGSQPVQDKKSGG-CC 201
>gi|340380157|ref|XP_003388590.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
gi|340386342|ref|XP_003391667.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
Length = 205
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
+YD+ FK+LLIGDSGVGK+ IL+ ++ + TIG+DFKI+ + + GK++KL IWD
Sbjct: 4 TYDFLFKLLLIGDSGVGKTCILVRFSEDAFNSTFISTIGIDFKIRTVDIEGKKIKLQIWD 63
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRGA GI+LVYDVT ++F N+ + W + +E + D K+++GN
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFDNIRN-WIRNIE-ENAAADVEKMILGN 121
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
K D + R V+RE G +LA+EH+ F+E SAK+ ++V+ F +L I
Sbjct: 122 KCDLEESRVVSRERGQLLAEEHQVKFMETSAKSGQNVETAFLNLAKDI 169
>gi|449461253|ref|XP_004148356.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
gi|449505222|ref|XP_004162409.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
Length = 202
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D + + V+ E A E F+E SAK+ +V++ F + +I
Sbjct: 120 GNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEI 169
>gi|162463546|ref|NP_001105546.1| GTP-binding protein YPTM1 [Zea mays]
gi|466170|sp|P16976.2|YPTM1_MAIZE RecName: Full=GTP-binding protein YPTM1
gi|287833|emb|CAA44918.1| yptm1 [Zea mays]
Length = 208
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 127/211 (60%), Gaps = 12/211 (5%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N +DY FK+LLIGDS VGKS LL +S D TIGVDFKI+ + V GK +KL I
Sbjct: 2 SNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD+T E+F N+ W E++ Y+ N K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLDEIDRYA-NDSVRKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV-----PS 180
GNK D RAV AQE FLE SAK + +V++ F + I + +
Sbjct: 120 GNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAA 179
Query: 181 LLEQGSAVVKNQILKQKEV-QESARGGNCCS 210
L + S VV+ +K + + QE + CCS
Sbjct: 180 LERKPSNVVQ---MKGRPIQQEQQKSSRCCS 207
>gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum]
gi|738941|prf||2001457J GTP-binding protein
Length = 203
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 123/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + R V+ + A + F+E SAK+ +V+ F + I + + Q
Sbjct: 120 GNKSDLTANRVVSYDTAKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
SA Q Q + G CCS
Sbjct: 178 SANNARPPTVQIRGQPVGQKGGCCS 202
>gi|449530083|ref|XP_004172026.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 187
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 109/163 (66%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YDY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D + V + A E FLE SAK++ +V+Q F
Sbjct: 120 GNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAF 162
>gi|358370660|dbj|GAA87271.1| secretion related GTPase (SrgA) [Aspergillus kawachii IFO 4308]
Length = 206
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 131/210 (62%), Gaps = 10/210 (4%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDL---LYKILEVP 179
IL+GNK D + +RAV+ E+G LA E FLE SAKN ++++ F DL + K ++
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINIEKAFYDLASDIKKGMDTS 178
Query: 180 SLLEQGSAVVKNQILKQKEVQESARGGNCC 209
+ GS V I +Q GG CC
Sbjct: 179 KSEQVGSQGVS--IDQQGSGLNGNAGGKCC 206
>gi|156555012|ref|XP_001603108.1| PREDICTED: ras-related protein Rab-2-like [Nasonia vitripennis]
Length = 214
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D D+ R V REEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLDARREVKREEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYE 169
>gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella vectensis]
gi|156219283|gb|EDO40167.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 128/206 (62%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLE 183
GNK D +++ V A+ FLE SAKN +V+Q F + +I PS
Sbjct: 123 GNKCDLTTKKVVDFTTAKEYAESLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPSPAP 182
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
QG+ +I V++ GG CC
Sbjct: 183 QGAG-SNVKINSSTPVKQG--GGGCC 205
>gi|131785|sp|P22125.1|RAB1_DISOM RecName: Full=Ras-related protein ORAB-1
gi|213123|gb|AAA49234.1| GTP-binding protein [Discopyge ommata]
Length = 202
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 128/206 (62%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLE 183
GNK D +++ V A FLE SAKN +V+Q F + +I + P
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATS 179
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
GS N ++ V+ S GG CC
Sbjct: 180 GGSE-KSNVNIQSTPVKSS--GGGCC 202
>gi|45185452|ref|NP_983169.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|44981141|gb|AAS50993.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|374106372|gb|AEY95282.1| FABR220Wp [Ashbya gossypii FDAG1]
Length = 204
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 130/207 (62%), Gaps = 8/207 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIGDSGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ + W +E++ Y T VK+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFDNMKT-WLQEIDRYGT-AGVVKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V E A LE SA ++ +V++ F + +I E S ++
Sbjct: 120 GNKNDLKDKKVVDFEVAREFADSLNIPVLETSALDSSNVEEAFLTMARQIKETMSHQQKE 179
Query: 186 SAVVKNQI---LKQKEVQESARGGNCC 209
S ++ LK + + S GG CC
Sbjct: 180 SGKKDDKSGVNLKGQSLANS--GGGCC 204
>gi|308475031|ref|XP_003099735.1| CRE-RAB-10 protein [Caenorhabditis remanei]
gi|308266390|gb|EFP10343.1| CRE-RAB-10 protein [Caenorhabditis remanei]
Length = 201
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 127/207 (61%), Gaps = 8/207 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ YD FK+LLIGDSGVGK+ IL ++ + TIG+DFKIK + + GK++KL
Sbjct: 1 MARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + ++ +++ +D VK+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL-EVPSLL 182
++GNK D R V+RE G +AQ+H F E SAK V F DL IL ++P
Sbjct: 119 ILGNKCDMSDRRVVSRERGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAILAKMPEST 178
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
++ S N + + Q G CC
Sbjct: 179 DEQSRDTVNPV----QPQRPGSSGGCC 201
>gi|307111274|gb|EFN59509.1| hypothetical protein CHLNCDRAFT_33935 [Chlorella variabilis]
Length = 209
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/219 (44%), Positives = 134/219 (61%), Gaps = 20/219 (9%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGK 59
MGS+ YDY K+LLIGDSGVGKS +LL +S TIG+DFKIK + + GK
Sbjct: 1 MGSR--RQDYDYLIKLLLIGDSGVGKSCLLLRFAEDSFTSSFITTIGIDFKIKKVLIDGK 58
Query: 60 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQD 119
+KL IWDTAGQERF T+TS+YYRGA GI+LVYDVT +FTN+ + W K +E ++++
Sbjct: 59 WVKLQIWDTAGQERFRTITSAYYRGAMGILLVYDVTDEASFTNIRN-WMKNIEQHASDN- 116
Query: 120 CVKILVGNKVDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYK 174
+LVGNK D D S+RAV G LA E + F E SAKN +V + F +D++ +
Sbjct: 117 ---VLVGNKSDMDESKRAVAYSRGQALADEFRMQFFETSAKNNTNVDEVFQSVARDIMLR 173
Query: 175 ILEVPSLLEQGSAVVKNQILK----QKEVQESARGGNCC 209
+ + + GS L+ Q++ S++GG CC
Sbjct: 174 LKDTQP--DAGSGAGSGPSLRVGAGQRKAVASSKGG-CC 209
>gi|324518786|gb|ADY47204.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 200
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 131/204 (64%), Gaps = 8/204 (3%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTI 65
+ YD+ FK+LLIGDSGVGK+SI+ ++ P+ TIG+DFKIK + V GKR+KL I
Sbjct: 3 HKYDFLFKLLLIGDSGVGKTSIIHRFTEDAF-SPTYISTIGIDFKIKTIEVRGKRIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + +EL+++ +D KIL+
Sbjct: 62 WDTAGQERFHTITTSYYRGAMGIVVVYDITDEGSFDNIAK-WLRYIELHAS-EDVQKILL 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
NK D RAV+ E G +A+ H FLE SA++ ++++ F DL IL + EQ
Sbjct: 120 ANKCDVIERRAVSSERGEKIAKAHGIKFLETSARSNINIQKAFGDLAEAILNKVTGDEQ- 178
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
V K ++ + S + CC
Sbjct: 179 --VEKTATVRPGISRTSTKRIGCC 200
>gi|358058905|dbj|GAA95303.1| hypothetical protein E5Q_01960 [Mixia osmundae IAM 14324]
Length = 218
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 117/177 (66%), Gaps = 11/177 (6%)
Query: 14 FKILLIGDSGVGKSSILLSL---ISNSVHDPSPTIGVDFKIKLL--TVGG----KRLKLT 64
K+LLIG S VGKSS+L + S + + T+GVD K+KL+ T G K KL
Sbjct: 11 LKLLLIGSSSVGKSSLLTRFTDEVFASDGESAATVGVDMKVKLVKRTPPGQSTAKTYKLA 70
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
+WDTAGQERF TLTSSYYRGAHG+I+VYDV RETF NL + W +E+E + N D V+I+
Sbjct: 71 LWDTAGQERFRTLTSSYYRGAHGVIVVYDVANRETFVNLDT-WFQELETFCHN-DIVRIV 128
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL 181
VGNK D++ R VT EEG + CLF+ECSAK ++V+ F ++ KI+E P L
Sbjct: 129 VGNKTDKEFARMVTAEEGQAWSDSRGCLFMECSAKQGKNVESLFDTVIDKIIENPRL 185
>gi|449458992|ref|XP_004147230.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
gi|449517559|ref|XP_004165813.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
Length = 202
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +++F N+ W E++ Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
D + + V+ E A E F+E SAK+ +V+Q F + +I
Sbjct: 123 SDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEI 169
>gi|291220707|ref|XP_002730366.1| PREDICTED: RAB10, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 200
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 133/210 (63%), Gaps = 15/210 (7%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ + TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T+ +TF N++ W + ++ ++ N+D ++
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITQPKTFDNITK-WLRNIDEHA-NEDVERM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVP 179
L+GNK D + +R + +E G +A+EH FLE SAK+ +V++ F +D+L K +
Sbjct: 119 LLGNKCDMEDKRMIPKERGESIAREHGIKFLETSAKSNVNVEKAFMTLAEDILRKTPQKD 178
Query: 180 SLLEQGSAVVKNQILKQKEVQESARGGNCC 209
S + S V + S+R CC
Sbjct: 179 SNPDSSSVSVHKET--------SSRKSGCC 200
>gi|147902722|ref|NP_001085321.1| rab2b, member RAS oncogene family [Xenopus laevis]
gi|49257196|gb|AAH71068.1| MGC78967 protein [Xenopus laevis]
gi|83318342|gb|AAI08769.1| MGC78967 protein [Xenopus laevis]
Length = 215
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 126/187 (67%), Gaps = 10/187 (5%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++ + GK +KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIDGKPIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF++L+S W ++ +S++ + V IL+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFSHLTS-WLEDARQHSSS-NMVIILI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +S R V+REEG A+EH +F+E SAK + +V++ F D +I + ++QG
Sbjct: 118 GNKSDLESRRDVSREEGEAFAREHGLIFMETSAKTSANVEEAFIDTAKEIYKK---IQQG 174
Query: 186 SAVVKNQ 192
V N+
Sbjct: 175 LFDVNNE 181
>gi|383852551|ref|XP_003701790.1| PREDICTED: ras-related protein Rab-18-like [Megachile rotundata]
Length = 219
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 118/177 (66%), Gaps = 3/177 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWD 67
++ + K+L+IG+S VGKSSI+L + ++ T+G+D+K K +T+ G +KL IWD
Sbjct: 2 TFYFVLKLLMIGESNVGKSSIILRFTEDEFYENMQSTVGMDYKTKQITIDGNMVKLAIWD 61
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF TLT SYYR G ILVYDVT R TF L + W E+ Y D VK++VGN
Sbjct: 62 TAGQERFRTLTPSYYRDGQGAILVYDVTDRVTFVKLET-WLNELNTYCNKTDIVKMVVGN 120
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
K+D + R V+ EEG+ A+ H+ L++E SAK + +K CF++L+ KI++ P L ++
Sbjct: 121 KIDLPN-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGLWDR 176
>gi|387017956|gb|AFJ51096.1| ras-related protein Rab-1A [Crotalus adamanteus]
Length = 205
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATS 182
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S+ G CC
Sbjct: 183 GGAEKSNVKIQSTPVKQSS--GGCC 205
>gi|390346094|ref|XP_003726477.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Strongylocentrotus
purpuratus]
Length = 206
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 127/207 (61%), Gaps = 8/207 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLE 183
GNK D +++ V A + + FLE SAKN +V+Q F + +I P +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAEIKNRMGPGSVP 182
Query: 184 QGSAVVKNQILKQKEVQESARGGNCCS 210
GS+ K + G CCS
Sbjct: 183 SGSSHDK---INPSTTPVKPSGSGCCS 206
>gi|89258407|gb|ABD65427.1| Rab1 [Suberites domuncula]
Length = 205
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGA+GII+VYDVT +E+FTN+ + W +E++ Y++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGANGIIIVYDVTDQESFTNVKT-WLQEIDRYAST-NVSKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A + + FLE SAKN +V+Q F + +I
Sbjct: 120 GNKCDLTNKKVVDFTTAKEFADQLQIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|326433258|gb|EGD78828.1| Rab1/RabD-family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 128/207 (61%), Gaps = 8/207 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +++F N+ W +E++ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKDSFENVKQ-WLQEIDRYAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLE 183
GNK D +++ V A FLE SAKN +V+Q F + +I P++
Sbjct: 120 GNKSDLAAKKQVDYTTAKEFADSIGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPTMAS 179
Query: 184 QGSAVVKNQILKQKEVQESARGGNCCS 210
G+ K L K S+ GG CCS
Sbjct: 180 GGAK--KKDTLDIKAKPASSSGG-CCS 203
>gi|302787058|ref|XP_002975299.1| rab family GTPase [Selaginella moellendorffii]
gi|302822855|ref|XP_002993083.1| rab family GTPase [Selaginella moellendorffii]
gi|300139083|gb|EFJ05831.1| rab family GTPase [Selaginella moellendorffii]
gi|300156873|gb|EFJ23500.1| rab family GTPase [Selaginella moellendorffii]
Length = 212
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 123/191 (64%), Gaps = 8/191 (4%)
Query: 2 GSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKR 60
GS YDY K+LLIGDSGVGKS +LL NS TIG+DFKI+ + + GKR
Sbjct: 4 GSGRARADYDYLIKLLLIGDSGVGKSCLLLRFSDNSFTTSFITTIGIDFKIRTIELDGKR 63
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
+KL IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ +
Sbjct: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NV 121
Query: 121 VKILVGNKVDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKI 175
KILVGNK D D S+RAV E+G LA E F E SAK ++V+ F +D+ ++
Sbjct: 122 NKILVGNKADMDESKRAVPTEKGQALADEFGIKFFETSAKTNQNVEDVFFTIARDIKQRL 181
Query: 176 LEVPSLLEQGS 186
E + E G+
Sbjct: 182 AESDAKAEPGN 192
>gi|442755753|gb|JAA70036.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 222
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 112/163 (68%), Gaps = 2/163 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YD+ FKI++IGDSG GKSS+LL ++ + + TIGVDFKIK + + +KL IWDT
Sbjct: 4 YDHLFKIIIIGDSGAGKSSLLLRFADDTYSESNMSTIGVDFKIKTVKIDNVTIKLQIWDT 63
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TS+YYRGAHGII VYDVT R +F ++ W ++E YS+ + K+L+GNK
Sbjct: 64 AGQERFRTITSTYYRGAHGIITVYDVTNRVSFESVKKTWLTDIEKYSS-ANISKLLIGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDL 171
VD + RAVT E A ++ ++E SAK ++V++ F+ +
Sbjct: 123 VDLEENRAVTSVEAREFAMQNNMDYIEASAKTAQNVEKAFESI 165
>gi|387914198|gb|AFK10708.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392881360|gb|AFM89512.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392884280|gb|AFM90972.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 129/206 (62%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLE 183
GNK D +++ V A FLE SAKN +V+Q F + +I + P
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATS 182
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
GS K+ + Q +S+ GG CC
Sbjct: 183 GGSE--KSNVNIQSTPVKSSSGG-CC 205
>gi|206725460|ref|NP_001128655.1| RAB1A, member RAS oncogene family [Taeniopygia guttata]
gi|397529551|ref|NP_001257591.1| ras-related protein Rab-1A [Gallus gallus]
gi|345329074|ref|XP_001513393.2| PREDICTED: ras-related protein Rab-1A-like [Ornithorhynchus
anatinus]
gi|197127903|gb|ACH44401.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197127905|gb|ACH44403.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 182
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S+ G CC
Sbjct: 183 GGAEKSNVKIQSTPVKQSS--GGCC 205
>gi|224129738|ref|XP_002328790.1| predicted protein [Populus trichocarpa]
gi|222839088|gb|EEE77439.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 127/209 (60%), Gaps = 16/209 (7%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YDY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSL 181
GNK D + V + A E FLE SAK++ +V+Q F ++ K+ P+
Sbjct: 120 GNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQPTA 179
Query: 182 LEQ-GSAVVKNQILKQKEVQESARGGNCC 209
+ G+ +K Q ++QK NCC
Sbjct: 180 SKSTGTVQMKGQPIEQK--------NNCC 200
>gi|145503838|ref|XP_001437891.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834329|emb|CAI44518.1| rab_B61 [Paramecium tetraurelia]
gi|124405052|emb|CAK70494.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 120/169 (71%), Gaps = 3/169 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPT-IGVDFKIKLLTVGGKRLKLTIWDT 68
YD+ FK+LLIG SGVGKS +L+ + N+ + IGVDFKIK + + K +KL IWDT
Sbjct: 9 YDHLFKLLLIGTSGVGKSCMLMRYVDNNFTNNFYNTIGVDFKIKSIFLENKNIKLQIWDT 68
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQ+RF T+T SYYRGAHGII+VYD+T RE+F ++ +W E++ Y+ +D +++LVGNK
Sbjct: 69 AGQDRFRTITCSYYRGAHGIIIVYDITDRESFDSV-KMWMSEIDKYA-QEDVIRMLVGNK 126
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
D D +RAV+ EEG LA++ K F+E SAK + +++Q F + +LE
Sbjct: 127 CDMDDKRAVSYEEGEALAKQLKLQFIETSAKLSTNIEQSFLTIAKNVLE 175
>gi|392559791|gb|EIW52975.1| ras-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 227
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 113/172 (65%), Gaps = 5/172 (2%)
Query: 15 KILLIGDSGVGKSSILLSLISNSV---HDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
K+LLIG+S VGKSS+LL + + TIGVDF++ + V KR+KL+IWDTAGQ
Sbjct: 15 KLLLIGNSSVGKSSLLLRFSDEQWLPEDESNATIGVDFRVHKMEVKSKRVKLSIWDTAGQ 74
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF T+TSSYYRGA GIILVYDV RE+F L W E+E Y ++ VKI+VGNKVD+
Sbjct: 75 ERFRTITSSYYRGAQGIILVYDVANRESFEALPR-WFSELETYVSSS-VVKIIVGNKVDK 132
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+ R V+ EG A LF+E SAK V+ F+D++ +I++ P L +
Sbjct: 133 EYSRQVSTAEGQAFATRMGALFIEASAKTAVGVEDAFRDVVARIIDTPELWQ 184
>gi|255549670|ref|XP_002515886.1| protein with unknown function [Ricinus communis]
gi|223544791|gb|EEF46306.1| protein with unknown function [Ricinus communis]
Length = 219
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 7/208 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKL 63
+ N DY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL
Sbjct: 16 IANCRRDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKL 75
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+TSSYYRGAHGII+V+DVT E+F N+ W E++ ++T+ + K+
Sbjct: 76 QIWDTAGQERFRTITSSYYRGAHGIIIVFDVTDEESFRNVKG-WLTEIDKFATD-NINKL 133
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
LVGNK D ++R V+ E A E FLE SAKN +V+ F + +I + +
Sbjct: 134 LVGNKCDVTNKRVVSNETAKAFADEIGIPFLETSAKNATNVEDAFMTMAAEIKKRMASQP 193
Query: 184 QGSAVVKNQI-LKQKEVQESARGGNCCS 210
+AV + ++ K V +S CCS
Sbjct: 194 AANAVRPTTVPIRGKPVNQST---TCCS 218
>gi|451996574|gb|EMD89040.1| hypothetical protein COCHEDRAFT_1140780 [Cochliobolus
heterostrophus C5]
Length = 206
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 131/209 (62%), Gaps = 8/209 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G+ +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +FTN+ + W VE ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRT-WFANVEQHAT-EGVNK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE--VPS 180
IL+GNK D + +RAV+ E+G LA E FLE SAK+ +V + F L I + + +
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSLAGDIKKRLIDT 178
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
SA K + Q + + GG CC
Sbjct: 179 ARTDQSATPKVDVSGQ-DGGNAGMGGKCC 206
>gi|302835618|ref|XP_002949370.1| RabD/Rab1 [Volvox carteri f. nagariensis]
gi|401686|sp|P31584.1|YPTV1_VOLCA RecName: Full=GTP-binding protein yptV1
gi|170661|gb|AAA34255.1| small G protein [Volvox carteri]
gi|300265197|gb|EFJ49389.1| RabD/Rab1 [Volvox carteri f. nagariensis]
Length = 203
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLAEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ V + A E FLE SAKN +V+Q F + +I
Sbjct: 120 GNKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|336270604|ref|XP_003350061.1| hypothetical protein SMAC_00950 [Sordaria macrospora k-hell]
gi|380095453|emb|CCC06926.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 205
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 130/209 (62%), Gaps = 13/209 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLT 64
N +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+KL
Sbjct: 4 NRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE ++T + KIL
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFANVEQHAT-EGVNKIL 120
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPS 180
+GNK D + +RAV++E+G LA E FLE SAK ++++ F D+ +I++ S
Sbjct: 121 IGNKCDWEEKRAVSKEQGQALADELGIPFLEVSAKANINIEEAFFSLANDIKKRIIDTSS 180
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
G + N + S GG CC
Sbjct: 181 KEASGGSSGVN----VADNSGSGSGGKCC 205
>gi|387202244|gb|AFJ68941.1| gtp-binding protein gb2, partial [Nannochloropsis gaditana CCMP526]
Length = 206
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 112/172 (65%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISN---SVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGDSGVGKS +LL VHD TIGV+F +L+ + GK +KL I
Sbjct: 2 SYAYLFKSIVIGDSGVGKSCLLLQFTDRRFVQVHDL--TIGVEFGARLVHIDGKAIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+ W +E +LYS+ + V +LV
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAR-WLEEAKLYSS-PNMVIMLV 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D D RAV+ EG A+ H LFLE SA+ +V+ F KI E
Sbjct: 118 GNKCDADGRRAVSTAEGQAFAEAHGLLFLETSARTGHNVEAAFSHTAEKIYE 169
>gi|402591657|gb|EJW85586.1| member Ras oncogene family RAB1A [Wuchereria bancrofti]
Length = 205
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 126/204 (61%), Gaps = 4/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD+T +E+F N+ W +E++ Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQ-WLQEIDRYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D RAV A + FLE SAK++ +V+Q F + +I ++Q
Sbjct: 123 GNKCDLIIRRAVEHSAAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRMGPIQQV 182
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+I + V E GG CC
Sbjct: 183 GTGPSVRIGGSQPVNEKKSGG-CC 205
>gi|51468998|emb|CAH17999.1| RAB1-like [Poa pratensis]
Length = 203
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 124/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +++F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V+ E A E F+E S KN +V Q F + I + + Q
Sbjct: 120 GNKCDLTDKKVVSYETAKAFADEIGIPFMETSLKNALNVGQAFMAMSASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A Q Q + G+CCS
Sbjct: 178 AANNARPATVQIRGQPVEQKGSCCS 202
>gi|50413456|ref|XP_457265.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
gi|49652930|emb|CAG85266.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
Length = 208
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
NN YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ V A FLE SA ++ +V+Q F + +I
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|54020781|ref|NP_001005636.1| rab2b, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49257826|gb|AAH74632.1| rab2b, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89269892|emb|CAJ83496.1| RAB2B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 215
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 125/187 (66%), Gaps = 10/187 (5%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++ + GK +KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIDGKPIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF++L+S W ++ +S++ + V IL+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFSHLTS-WLEDARQHSSS-NMVIILI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +S R V+REEG A+EH +F+E SAK +V++ F D +I + ++QG
Sbjct: 118 GNKSDLESRRDVSREEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEIYKK---IQQG 174
Query: 186 SAVVKNQ 192
V N+
Sbjct: 175 LFDVNNE 181
>gi|326506496|dbj|BAJ86566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 124/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT ++F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDLDSFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V+ E A E F+E SAKN +V+Q F + I + + Q
Sbjct: 120 GNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A Q Q + +CCS
Sbjct: 178 AANSARPATVQIRGQPVEQKTSCCS 202
>gi|427787177|gb|JAA59040.1| Putative rab-protein 10 [Rhipicephalus pulchellus]
Length = 200
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 119/173 (68%), Gaps = 3/173 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ H TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNTKSFDNIAK-WLRYIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL 176
++GNK D + +R ++RE G +A +H F+E SAK ++++ F +L IL
Sbjct: 119 ILGNKCDMEDKRLISRERGEAVAIDHNIRFMETSAKTNVNIERAFTELAEAIL 171
>gi|464524|sp|Q05974.1|RAB1A_LYMST RecName: Full=Ras-related protein Rab-1A
gi|288934|emb|CAA51233.1| RAB1 [Lymnaea stagnalis]
Length = 205
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 124/204 (60%), Gaps = 4/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A + FLE SAKN +V+Q F + +I +
Sbjct: 123 GNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAA 182
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
S K + SA G CC
Sbjct: 183 SD-SKPSVKINSSTPVSANKGGCC 205
>gi|406604644|emb|CCH43902.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 203
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 118/179 (65%), Gaps = 5/179 (2%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGG 58
M ++ + +YD K+LL+GDSGVGKS +LL + + + PS TIG+DFKI+ + + G
Sbjct: 1 MATRTPSRAYDSILKLLLVGDSGVGKSCLLLRFVEDKFN-PSFITTIGIDFKIRTIEIDG 59
Query: 59 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQ 118
KR+KL +WDTAGQERF T+T++YYRGA GIILVYDVT TF N+ + W + V ++ N+
Sbjct: 60 KRIKLQVWDTAGQERFRTITTAYYRGATGIILVYDVTDERTFENVRN-WFQTVHQHA-NE 117
Query: 119 DCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
D ILVGNK D RAV+ E G LAQE FLE SAK ++V + F L I E
Sbjct: 118 DTQLILVGNKNDEKDLRAVSSERGESLAQELGIPFLEASAKTNDNVDELFFKLAKIIQE 176
>gi|346472349|gb|AEO36019.1| hypothetical protein [Amblyomma maculatum]
Length = 200
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 119/173 (68%), Gaps = 3/173 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ H TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNTKSFDNIAK-WLRYIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL 176
++GNK D + +R ++RE G +A +H F+E SAK ++++ F +L IL
Sbjct: 119 ILGNKCDMEDKRLISRERGEAVAIDHNIRFMETSAKTNVNIERAFTELAEAIL 171
>gi|195028532|ref|XP_001987130.1| GH21751 [Drosophila grimshawi]
gi|195383514|ref|XP_002050471.1| GJ22175 [Drosophila virilis]
gi|193903130|gb|EDW01997.1| GH21751 [Drosophila grimshawi]
gi|194145268|gb|EDW61664.1| GJ22175 [Drosophila virilis]
Length = 213
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D DS R V +EEG A+EH +F+E SA+ +V++ F + +I E
Sbjct: 118 GNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYE 169
>gi|229593818|ref|XP_001026663.2| Ras family protein [Tetrahymena thermophila]
gi|225567282|gb|EAS06418.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777760|dbj|BAJ21276.1| Rab-family small GTPase Rab1D [Tetrahymena thermophila]
Length = 223
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 135/210 (64%), Gaps = 14/210 (6%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
D+ FKILLIG+SGVGK+ +L+ N ++ TIGVDFKIK L + K +KL IWDTA
Sbjct: 17 DHLFKILLIGNSGVGKTCMLMRYSENQFTYNFYNTIGVDFKIKALRLEDKNIKLQIWDTA 76
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQ+RF T+T SYYRGAHGI++VYD+T RE+F N+ + W E+E ++ + K+L+GNK
Sbjct: 77 GQDRFRTITCSYYRGAHGILIVYDITERESFDNVKT-WMVEIEKHAK-KGVQKMLIGNKS 134
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE----QG 185
D S RAV+ EEG LA++++ F E SAKN ++ F +L IL +L QG
Sbjct: 135 DC-SNRAVSYEEGFELAKQYQIPFAETSAKNASNIDLAFTNLAKNILGSGQVLNTAPSQG 193
Query: 186 SAVVKNQILKQ----KEVQESAR--GGNCC 209
+ +N+ Q ++VQ++ + G +CC
Sbjct: 194 MKIQQNKYNTQQSGSRQVQQNQKNQGDDCC 223
>gi|198415359|ref|XP_002126732.1| PREDICTED: similar to Ras-related protein ORAB-1 [Ciona
intestinalis]
Length = 204
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 126/206 (61%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 4 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 63
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 64 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 121
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A K FLE SAK +V+Q F + E+ + + G
Sbjct: 122 GNKCDLTTKKVVDYTTAKEYADTLKIPFLETSAKTANNVEQAFMTMA---AEIKNRMGPG 178
Query: 186 SAVVKNQILKQKEVQESARG--GNCC 209
+A Q K + G G CC
Sbjct: 179 TAASPGQSNKVDISSKPVDGKQGGCC 204
>gi|405964668|gb|EKC30125.1| Ras-related protein Rab-8A [Crassostrea gigas]
Length = 207
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 126/185 (68%), Gaps = 4/185 (2%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
+YDY FK+LLIGDSGVGK+ +L ++ + TIG+DFKI+ + + GK++KL IWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRGA GI+LVYD+T ++F N+ + W + +E +++ QD K+++GN
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRN-WIRNIEEHAS-QDVDKMILGN 121
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQGS 186
K D + +R V++E+G LA EH F+E SAK + +V+ F L I ++ LE +
Sbjct: 122 KCDMNDKRVVSKEKGEALAIEHGIKFMETSAKASINVEDAFFTLARDIKAKMDRKLESSN 181
Query: 187 AVVKN 191
A KN
Sbjct: 182 AQAKN 186
>gi|348538098|ref|XP_003456529.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 202
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAK+ +V+Q F + +I + +
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATA 179
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G+A N ++ K V S+ G CC
Sbjct: 180 GAAEKSNVKIQSKPVNTSS--GGCC 202
>gi|291237662|ref|XP_002738747.1| PREDICTED: RAB1A, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 206
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 128/207 (61%), Gaps = 9/207 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFHNVKQ-WLQEIDRYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVPSLL 182
GNK D +++ V A + + FLE SAKN +V+Q F + +I + S+
Sbjct: 123 GNKCDLTTKKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAEIKNRMGPGSMP 182
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
+ G VK Q Q S G CC
Sbjct: 183 QDGKQNVKIQGASTPVKQSS---GGCC 206
>gi|170594385|ref|XP_001901944.1| Ras-related protein Rab-1A [Brugia malayi]
gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative [Brugia malayi]
Length = 205
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 126/204 (61%), Gaps = 4/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD+T +E+F N+ W +E++ Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQ-WLQEIDRYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D RAV A + FLE SAK++ +V+Q F + +I ++Q
Sbjct: 123 GNKCDLIIRRAVEHSAAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRMGPIQQV 182
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+I + V E GG CC
Sbjct: 183 GTGPSVRIGGSQPVNEKKSGG-CC 205
>gi|158294114|ref|XP_556035.3| AGAP005393-PA [Anopheles gambiae str. PEST]
gi|157015414|gb|EAL39812.3| AGAP005393-PA [Anopheles gambiae str. PEST]
Length = 213
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D DS R V +EEG A+EH +F+E SA+ +V++ F + +I E
Sbjct: 118 GNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYE 169
>gi|345569442|gb|EGX52308.1| hypothetical protein AOL_s00043g97 [Arthrobotrys oligospora ATCC
24927]
Length = 203
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 132/213 (61%), Gaps = 19/213 (8%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G+ +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIDLDGKRIK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + VE ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIQT-WFQNVEQHAT-EGVNK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEV 178
IL+GNK D + +R V+ E G LA E F+E SAK +V++ F +D+ +I++
Sbjct: 119 ILIGNKCDWEEKRVVSTERGQALANELGIPFMEVSAKANINVEEAFLLLARDIKKRIMDS 178
Query: 179 PSLLEQGSAVVKNQILKQKEVQE--SARGGNCC 209
S + VV V E SA GG CC
Sbjct: 179 SSGEKNQPGVVN--------VNETSSAAGGKCC 203
>gi|48103887|ref|XP_392903.1| PREDICTED: ras-related protein Rab-18-B [Apis mellifera]
Length = 223
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 115/172 (66%), Gaps = 3/172 (1%)
Query: 14 FKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDTAGQE 72
K+L+IG+S VGKSSI+L + H+ T+G+D++ K +T+ G +KL IWDTAGQE
Sbjct: 11 LKLLMIGESNVGKSSIILRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLAIWDTAGQE 70
Query: 73 RFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRD 132
RF TLT SYYR G ILVYDVT R TF L + W E+ Y D +K++VGNK+D
Sbjct: 71 RFRTLTPSYYRDGQGAILVYDVTDRVTFMKLET-WLNELNTYCNKTDIIKMVVGNKIDLP 129
Query: 133 SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
+ R V+ EEG+ A+ H+ L++E SAK + +K CF++L+ KI++ P L ++
Sbjct: 130 N-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGLWDR 180
>gi|242073190|ref|XP_002446531.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
gi|241937714|gb|EES10859.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
Length = 207
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 126/209 (60%), Gaps = 11/209 (5%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIW 66
N +DY FK+LLIGDS VGKS LL +S D TIGVDFKI+ + + GK +KL IW
Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIW 62
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+TSSYYRGAHGII+VYD+T E+F N+ W E++ Y+ + C K+LVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLSEIDRYANDTVC-KLLVG 120
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-----LEVPSL 181
NK D R V A+E FLE SAK++ +V++ F + I +L
Sbjct: 121 NKCDLAESRTVDTSVAQAYAEEIGIPFLETSAKDSINVEEAFLAMSAAIKNSKARSQAAL 180
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCCS 210
+ S +V+ +K + +Q+ + CCS
Sbjct: 181 ERKPSNIVQ---MKGQPIQQEQQKSRCCS 206
>gi|440548634|gb|AGC10822.1| Rab-1 [Eriocheir sinensis]
Length = 204
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 126/207 (60%), Gaps = 11/207 (5%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +E+F N+ W +E++ Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDTTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVPSLL 182
GN+ D ++ V + A FLE SAKN +V+Q F + +I + PS
Sbjct: 123 GNQCDLTHKKVVDYQTAKEYADSLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPPS-- 180
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
GSA VK + E GG CC
Sbjct: 181 APGSAGVK---INPSVPVEPQPGGGCC 204
>gi|224012645|ref|XP_002294975.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220969414|gb|EED87755.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
Length = 213
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 125/199 (62%), Gaps = 21/199 (10%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK++LIGDSGVGKS +LL ++ + TIGVDF+ + + +G K +KL IWDT
Sbjct: 12 YDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKMGKKTVKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TS+YYRGA GII+VYD T ++F +++ W KEV Y++ C K+LVGNK
Sbjct: 72 AGQERFRTITSAYYRGADGIIMVYDTTSSDSFDHVND-WLKEVNRYASEGTC-KLLVGNK 129
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
DR ++RAVT E+ A + FLE SAK ++V++ F
Sbjct: 130 SDRTADRAVTTEQAKEFADDLGVAFLETSAKTAKNVEEAF------------------LT 171
Query: 189 VKNQILKQKEVQESARGGN 207
+ +++KQ+E + +A GG+
Sbjct: 172 MAGELIKQREAKIAANGGD 190
>gi|195998505|ref|XP_002109121.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
gi|190589897|gb|EDV29919.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
Length = 202
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 126/204 (61%), Gaps = 4/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YD+ FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT + +F N+ W +E++ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQVSFNNVKQ-WLQEIDRYAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D S++ + A FLE SAKN +V+Q F + +I +
Sbjct: 120 GNKCDLTSKKVIDYVTAKEYADALDIPFLETSAKNATNVEQAFLTMAAEIKKRMGPSSAA 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
SA N ++ K V ++ GG CC
Sbjct: 180 SAPTGNVKIQSKPVADNKSGG-CC 202
>gi|384253262|gb|EIE26737.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 213
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 121/187 (64%), Gaps = 10/187 (5%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++ + GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++ ++ N + +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMTIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D RAVT EEG A+EH +FLE SAK +V++ F + KI E +EQG
Sbjct: 118 GNKSDLTHRRAVTTEEGEQFAKEHGLVFLETSAKTAHNVEEAFINTARKIYEK---IEQG 174
Query: 186 SAVVKNQ 192
V N+
Sbjct: 175 VFDVSNE 181
>gi|225435058|ref|XP_002284365.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297746128|emb|CBI16184.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 131/206 (63%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F +D+ ++ + S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+A+ NQ + V ++A+ CC
Sbjct: 190 P-TAIRINQPDQASGVGQTAQKSACC 214
>gi|156847653|ref|XP_001646710.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156117390|gb|EDO18852.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 207
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 124/179 (69%), Gaps = 3/179 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIG+SGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVQLDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRG+HGII+VYD+T +E+F N +W +E++ Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDITDQESF-NGVKMWLQEIDRYATST-VLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
GNK D + +R V + A+ +K FLE SA ++ +V++ F + +I E S +Q
Sbjct: 120 GNKCDLNDKRVVEYDVAKEFAEANKMPFLETSALDSTNVEEAFLTMARQIKESISQQQQ 178
>gi|442756017|gb|JAA70168.1| Putative gtp-binding protein [Ixodes ricinus]
Length = 200
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 130/206 (63%), Gaps = 7/206 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ H TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNSKSFDNIAK-WLRYIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++GNK D + +R V+RE G +A +H F+E SAK +++ F +L IL
Sbjct: 119 ILGNKCDMEDKRLVSRERGNAVAIDHGIRFMETSAKTNVNIEFAFTELAEAILNKQM--- 175
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
G + +NQ + + + R NCC
Sbjct: 176 AGKDLAENQD-RLRVLPPEKRVMNCC 200
>gi|157107937|ref|XP_001650005.1| ras-related protein Rab-2A, putative [Aedes aegypti]
gi|170056253|ref|XP_001863947.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|108879444|gb|EAT43669.1| AAEL004902-PA [Aedes aegypti]
gi|167876016|gb|EDS39399.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 213
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D DS R V +EEG A+EH +F+E SA+ +V++ F + +I E
Sbjct: 118 GNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYE 169
>gi|367011297|ref|XP_003680149.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
gi|359747808|emb|CCE90938.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
Length = 208
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 138/212 (65%), Gaps = 14/212 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIG+SGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRG+HGII+VYDVT +E+F N +W +E++ Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATST-VLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ- 184
GNK D + +R V + A+ +K FLE SA ++ +V+Q F + +I + S+ +Q
Sbjct: 120 GNKCDLEDKRVVEYDVAREFAEANKMPFLETSALDSTNVEQAFLTMAKQIKD--SMAQQH 177
Query: 185 ----GSAVVKNQ---ILKQKEVQESARGGNCC 209
GS +Q LK + + +A G CC
Sbjct: 178 ARDGGSNAKDDQGNVNLKGQSLTNNA-GNGCC 208
>gi|74834459|emb|CAI44552.1| rab_A61 [Paramecium tetraurelia]
Length = 211
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 120/169 (71%), Gaps = 3/169 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPT-IGVDFKIKLLTVGGKRLKLTIWDT 68
YD+ FK+LLIG SGVGKS +L+ + N+ + IGVDFKIK + + K +KL IWDT
Sbjct: 9 YDHLFKLLLIGTSGVGKSCMLMRYVDNNFTNNFYNTIGVDFKIKSIFLENKNIKLQIWDT 68
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQ+RF T+T SYYRGAHGII+VYD+T RE+F ++ +W E++ Y+ +D +++LVGNK
Sbjct: 69 AGQDRFRTITCSYYRGAHGIIIVYDITDRESFDSV-KMWMSEIDKYA-QEDVIRMLVGNK 126
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
D D +RAV+ EEG LA++ K F+E SAK + +++Q F + +LE
Sbjct: 127 CDVDDKRAVSYEEGEALAKQLKLQFIETSAKLSTNIEQSFLTIAKNVLE 175
>gi|312382073|gb|EFR27648.1| hypothetical protein AND_05520 [Anopheles darlingi]
Length = 182
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 125/188 (66%), Gaps = 10/188 (5%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D DS R V +EEG A+EH +F+E SA+ +V++ F + +I E +++G
Sbjct: 118 GNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEK---IQEG 174
Query: 186 SAVVKNQI 193
+ N++
Sbjct: 175 VFDINNEV 182
>gi|168027125|ref|XP_001766081.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682724|gb|EDQ69140.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 126/207 (60%), Gaps = 8/207 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL +S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V+ F +D+ ++ E S E
Sbjct: 130 ADMDESKRAVPTAKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKQRLAETDSKPE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCCS 210
+ L Q+ +CCS
Sbjct: 190 AAKNAKPDVKLLAGNSQQKPASSSCCS 216
>gi|344234197|gb|EGV66067.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 205
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
NN YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ V A FLE SA ++ +V+Q F + +I
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|147783308|emb|CAN64127.1| hypothetical protein VITISV_022421 [Vitis vinifera]
Length = 216
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 131/206 (63%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F +D+ ++ + S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+A+ NQ + V ++A+ CC
Sbjct: 190 P-TAIRINQPDQAXGVGQTAQKSACC 214
>gi|13569962|ref|NP_112243.1| ras-related protein Rab-1B [Homo sapiens]
gi|197100392|ref|NP_001127221.1| ras-related protein Rab-1B [Pongo abelii]
gi|388490382|ref|NP_001253093.1| ras-related protein Rab-1B [Macaca mulatta]
gi|73983002|ref|XP_852545.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Canis lupus
familiaris]
gi|194218484|ref|XP_001491236.2| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Equus
caballus]
gi|301762492|ref|XP_002916663.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Ailuropoda
melanoleuca]
gi|332250270|ref|XP_003274276.1| PREDICTED: ras-related protein Rab-1B [Nomascus leucogenys]
gi|344295844|ref|XP_003419620.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Loxodonta
africana]
gi|348565037|ref|XP_003468310.1| PREDICTED: ras-related protein Rab-1B-like [Cavia porcellus]
gi|395851731|ref|XP_003798406.1| PREDICTED: ras-related protein Rab-1B [Otolemur garnettii]
gi|397517009|ref|XP_003828712.1| PREDICTED: ras-related protein Rab-1B [Pan paniscus]
gi|403293572|ref|XP_003937787.1| PREDICTED: ras-related protein Rab-1B [Saimiri boliviensis
boliviensis]
gi|410974562|ref|XP_003993713.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Felis catus]
gi|23396834|sp|Q9H0U4.1|RAB1B_HUMAN RecName: Full=Ras-related protein Rab-1B
gi|75070920|sp|Q5RE13.1|RAB1B_PONAB RecName: Full=Ras-related protein Rab-1B
gi|33150668|gb|AAP97212.1|AF092437_1 rab1B [Homo sapiens]
gi|12052796|emb|CAB66570.1| hypothetical protein [Homo sapiens]
gi|49522855|gb|AAH71169.1| RAB1B, member RAS oncogene family [Homo sapiens]
gi|55726450|emb|CAH89994.1| hypothetical protein [Pongo abelii]
gi|117645214|emb|CAL38073.1| hypothetical protein [synthetic construct]
gi|158257604|dbj|BAF84775.1| unnamed protein product [Homo sapiens]
gi|189067518|dbj|BAG37733.1| unnamed protein product [Homo sapiens]
gi|208967236|dbj|BAG73632.1| RAB1B, member RAS oncogene family [synthetic construct]
gi|351710863|gb|EHB13782.1| Ras-related protein Rab-1B [Heterocephalus glaber]
gi|380785433|gb|AFE64592.1| ras-related protein Rab-1B [Macaca mulatta]
gi|384949652|gb|AFI38431.1| ras-related protein Rab-1B [Macaca mulatta]
gi|410214286|gb|JAA04362.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410266454|gb|JAA21193.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410305364|gb|JAA31282.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410336325|gb|JAA37109.1| RAB1B, member RAS oncogene family [Pan troglodytes]
Length = 201
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM---AAEIKKRMGPG 176
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+A + LK GG CC
Sbjct: 177 AASGGERPNLKIDSTPVKPAGGGCC 201
>gi|448081057|ref|XP_004194794.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359376216|emb|CCE86798.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
NN YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ V A FLE SA ++ +V+Q F + +I
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|195120996|ref|XP_002005007.1| GI19298 [Drosophila mojavensis]
gi|193910075|gb|EDW08942.1| GI19298 [Drosophila mojavensis]
Length = 213
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D DS R V +EEG A+EH +F+E SA+ +V++ F + +I E
Sbjct: 118 GNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYE 169
>gi|72535190|ref|NP_001026957.1| ras-related protein Rab-1A [Sus scrofa]
gi|75056559|sp|Q52NJ2.3|RAB1A_PIG RecName: Full=Ras-related protein Rab-1A
gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa]
Length = 205
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 128/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT + +F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 182
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S GG CC
Sbjct: 183 GGAEKSNVKIQSTPVKQS--GGGCC 205
>gi|49065350|emb|CAG38493.1| RAB1B [Homo sapiens]
Length = 201
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTENYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM---AAEIKKRMGPG 176
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+A + LK GG CC
Sbjct: 177 AASGGERPNLKIDSTPVKPAGGGCC 201
>gi|344304693|gb|EGW34925.1| hypothetical protein SPAPADRAFT_133146 [Spathaspora passalidarum
NRRL Y-27907]
Length = 207
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 129/208 (62%), Gaps = 7/208 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
NN YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQ 184
GNK D ++ V A FLE SA ++ +V+Q F + +I ++ S
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMTSNTNS 179
Query: 185 ---GSAVVKNQILKQKEVQESARGGNCC 209
G+A K+ + + E S + +CC
Sbjct: 180 GNAGNAKGKSNVNLRGESLTSNQSNSCC 207
>gi|297833958|ref|XP_002884861.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
gi|297330701|gb|EFH61120.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 110/163 (67%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YDY FK+LLIGDS VGKS +LL ++ D TIGVDFKI+ + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T E+F N+ W E++ Y+ N+ K+L+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQ-WLSEIDRYA-NESVCKLLI 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D + V+ E G LA E FLE SAK++ +V+Q F
Sbjct: 120 GNKNDMVENKVVSTETGKALADELGIPFLETSAKDSINVEQAF 162
>gi|409082456|gb|EKM82814.1| hypothetical protein AGABI1DRAFT_111382 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200290|gb|EKV50214.1| hypothetical protein AGABI2DRAFT_190604 [Agaricus bisporus var.
bisporus H97]
Length = 204
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 123/201 (61%), Gaps = 3/201 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +TFTN+ W +E++ Y++ + K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D ++ V A + FLE SAKN +V+Q F + +I + +
Sbjct: 124 SDLTGKKVVEYTVAKEFADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMGSATAPTGA 183
Query: 189 VKNQILKQKEVQESARGGNCC 209
K+ + + +S + CC
Sbjct: 184 AKSSTVTPGQSVQSQQSNGCC 204
>gi|402892814|ref|XP_003909603.1| PREDICTED: ras-related protein Rab-1B [Papio anubis]
Length = 264
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 65 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 124
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 125 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 182
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 183 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM---AAEIKKRMGPG 239
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+A + LK GG CC
Sbjct: 240 AASGGERPNLKIDSTPVKPAGGGCC 264
>gi|149244388|ref|XP_001526737.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449131|gb|EDK43387.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 207
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 7/208 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
NN YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQ 184
GNK D ++ V A FLE SA ++ +V+Q F + +I ++ S
Sbjct: 120 GNKADLADKKIVEYTAAKEFADALNIPFLETSALSSTNVEQAFYTMARQIKAQMTSNANV 179
Query: 185 GSAV---VKNQILKQKEVQESARGGNCC 209
G A K+ + + E S + +CC
Sbjct: 180 GGAAGNKGKSNVNLRGESLTSTQSNSCC 207
>gi|357631253|gb|EHJ78843.1| small GTP-binding protein Rab10 [Danaus plexippus]
Length = 206
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 119/174 (68%), Gaps = 3/174 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL N TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T +TF ++ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
++GNK D + +R V++E G +A+EH F+E SAK+ ++++ F +L IL+
Sbjct: 119 ILGNKCDMEDKRVVSKERGEAIAREHGIRFMETSAKSNTNIERAFSELAEAILD 172
>gi|15229836|ref|NP_187779.1| Ras-related protein RABD1 [Arabidopsis thaliana]
gi|75338904|sp|Q9ZRE2.1|RABD1_ARATH RecName: Full=Ras-related protein RABD1; Short=AtRABD1; AltName:
Full=Ras-related protein ATFP8
gi|6671929|gb|AAF23189.1|AC016795_2 putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|4097557|gb|AAD00111.1| ATFP8 [Arabidopsis thaliana]
gi|26451349|dbj|BAC42775.1| putative GTP-binding protein ATFP8 [Arabidopsis thaliana]
gi|28973343|gb|AAO63996.1| putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|332641569|gb|AEE75090.1| Ras-related protein RABD1 [Arabidopsis thaliana]
Length = 205
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 110/163 (67%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YDY FK+LLIGDS VGKS +LL ++ D TIGVDFKI+ + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T E+F N+ W E++ Y+ N+ K+L+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQ-WLSEIDRYA-NESVCKLLI 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D + V+ E G LA E FLE SAK++ +V+Q F
Sbjct: 120 GNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAF 162
>gi|212535970|ref|XP_002148141.1| Rab GTPase SrgA, putative [Talaromyces marneffei ATCC 18224]
gi|210070540|gb|EEA24630.1| Rab GTPase SrgA, putative [Talaromyces marneffei ATCC 18224]
Length = 206
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 128/208 (61%), Gaps = 6/208 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
IL+GNK D + +RAV+ E+G LA E FLE SAKN +V + F L +I +V
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQKLADELGIPFLEVSAKNNINVDKAFYSLASEIKKVMDST 178
Query: 183 EQGSAVVKNQILKQKEVQESAR-GGNCC 209
+ A + + Q + GG CC
Sbjct: 179 KSEQAGGQGVNIDQNNAGSNGNLGGKCC 206
>gi|241948557|ref|XP_002417001.1| RAB-family small GTP-binding protein, putative; YPT1-like RAB
GTPase, putative; transport GTPase, putative [Candida
dubliniensis CD36]
gi|223640339|emb|CAX44589.1| RAB-family small GTP-binding protein, putative [Candida
dubliniensis CD36]
Length = 207
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
NN YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ V A FLE SA ++ +V+Q F + +I
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|145348815|ref|XP_001418839.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|308805733|ref|XP_003080178.1| YptC1 (ISS) [Ostreococcus tauri]
gi|116058638|emb|CAL54345.1| YptC1 (ISS) [Ostreococcus tauri]
gi|144579069|gb|ABO97132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 123/204 (60%), Gaps = 3/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTGTYISTIGVDFKIRTVELEGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F + W E++ Y+ N++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDMESFEAVKG-WLNEIDRYA-NENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D S++ V A E F+E SAKN +V+Q F + +I + Q
Sbjct: 120 GNKSDLTSQKVVDYATAKAFADEIGIPFIETSAKNATNVEQAFMTMANEIKNRMASQPQM 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+A + ++ E + +CC
Sbjct: 180 NAGPRGNTVRPGEGRSVNAKSSCC 203
>gi|392876316|gb|AFM86990.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 129/206 (62%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGI++VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIMVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLE 183
GNK D +++ V A FLE SAKN +V+Q F + +I + P
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATS 182
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
GS K+ + Q +S+ GG CC
Sbjct: 183 GGSE--KSNVNIQSTPVKSSSGG-CC 205
>gi|402079275|gb|EJT74540.1| GTP-binding protein ypt2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 203
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 128/217 (58%), Gaps = 29/217 (13%)
Query: 6 GNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKL 63
GN +YD K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+KL
Sbjct: 3 GNRNYDVLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVKL 61
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + KI
Sbjct: 62 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFANVEQHAS-EGVNKI 119
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
L+GNK D + +RAV+ E+G LA E FLE SAK ++ + F L
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKGNINIDKAFYSL------------ 167
Query: 184 QGSAVVKNQILKQKEVQ-----------ESARGGNCC 209
S + K I KE Q E++R GNCC
Sbjct: 168 -ASDIKKRTIDTAKEYQNPSSVNVGANTEASRTGNCC 203
>gi|330797350|ref|XP_003286724.1| Rab GTPase [Dictyostelium purpureum]
gi|325083322|gb|EGC36778.1| Rab GTPase [Dictyostelium purpureum]
Length = 205
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 116/179 (64%), Gaps = 10/179 (5%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
+D+ FKILLIGDSGVGKS +LL +S D TIGVDFKIK L + GK +KL IWDT
Sbjct: 7 HDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDT 66
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGA GIILVYD T +++F N+ W E+E Y+ ++ K+LVGNK
Sbjct: 67 AGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQ-WMGEIERYAC-ENVNKLLVGNK 124
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF-------KDLLYKILEVPS 180
D +E+ V + A+ F+E SAKN +V++CF K+ L I + PS
Sbjct: 125 TDLVNEKVVDSNQAKSFAESMGIPFIETSAKNATNVEECFISMARDIKNRLADIQDSPS 183
>gi|17137088|ref|NP_477090.1| Rab2, isoform A [Drosophila melanogaster]
gi|442622498|ref|NP_001260732.1| Rab2, isoform B [Drosophila melanogaster]
gi|194758098|ref|XP_001961299.1| GF11067 [Drosophila ananassae]
gi|194864038|ref|XP_001970739.1| GG23219 [Drosophila erecta]
gi|195474169|ref|XP_002089364.1| GE19072 [Drosophila yakuba]
gi|195580994|ref|XP_002080319.1| GD10420 [Drosophila simulans]
gi|2313035|dbj|BAA21706.1| rab2 [Drosophila melanogaster]
gi|21645117|gb|AAM70817.1| Rab2, isoform A [Drosophila melanogaster]
gi|27820101|gb|AAO25075.1| GH01619p [Drosophila melanogaster]
gi|190622597|gb|EDV38121.1| GF11067 [Drosophila ananassae]
gi|190662606|gb|EDV59798.1| GG23219 [Drosophila erecta]
gi|194175465|gb|EDW89076.1| GE19072 [Drosophila yakuba]
gi|194192328|gb|EDX05904.1| GD10420 [Drosophila simulans]
gi|220944512|gb|ACL84799.1| Rab2-PA [synthetic construct]
gi|220954388|gb|ACL89737.1| Rab2-PA [synthetic construct]
gi|440214116|gb|AGB93265.1| Rab2, isoform B [Drosophila melanogaster]
Length = 213
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D DS R V +EEG A+EH +F+E SA+ +V++ F + +I E
Sbjct: 118 GNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYE 169
>gi|410045431|ref|XP_003313192.2| PREDICTED: ras-related protein Rab-1B isoform 2 [Pan troglodytes]
Length = 269
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 70 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 129
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 130 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 187
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 188 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM---AAEIKKRMGPG 244
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+A + LK GG CC
Sbjct: 245 AASGGERPNLKIDSTPVKPAGGGCC 269
>gi|125806738|ref|XP_001360146.1| GA17076 [Drosophila pseudoobscura pseudoobscura]
gi|195149123|ref|XP_002015507.1| GL11116 [Drosophila persimilis]
gi|195455130|ref|XP_002074572.1| GK23088 [Drosophila willistoni]
gi|54635317|gb|EAL24720.1| GA17076 [Drosophila pseudoobscura pseudoobscura]
gi|194109354|gb|EDW31397.1| GL11116 [Drosophila persimilis]
gi|194170657|gb|EDW85558.1| GK23088 [Drosophila willistoni]
Length = 213
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D DS R V +EEG A+EH +F+E SA+ +V++ F + +I E
Sbjct: 118 GNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYE 169
>gi|402218107|gb|EJT98185.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 215
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 115/187 (61%), Gaps = 5/187 (2%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSV---HDPSPTIGVDFKIKLLTVGGKRLKLT 64
S + KILLIGDS VGKSS+LL S + S TIGVDFK++ + V G + KL+
Sbjct: 7 TSAPANLKILLIGDSSVGKSSLLLRFSDQSFLSEEESSATIGVDFKVQRIEVDGVKYKLS 66
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+TSSYYRGA G+ILVYDV+ RE+F +L W E+E Y K++
Sbjct: 67 IWDTAGQERFRTITSSYYRGAQGVILVYDVSSRESFDDLPR-WFTELETY-CGPSVAKVI 124
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
VGNK+D++ R V EG A+ LFLE SAK V + F+ ++ KI+ P L ++
Sbjct: 125 VGNKIDKEFSRRVPTAEGQAYAERMGALFLESSAKRGIHVDEVFQTIVRKIVATPELWQK 184
Query: 185 GSAVVKN 191
N
Sbjct: 185 NKPGTAN 191
>gi|380023930|ref|XP_003695762.1| PREDICTED: ras-related protein Rab-18-B-like [Apis florea]
Length = 223
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 115/172 (66%), Gaps = 3/172 (1%)
Query: 14 FKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDTAGQE 72
K+L+IG+S VGKSSI+L + H+ T+G+D++ K +T+ G +KL IWDTAGQE
Sbjct: 11 LKLLMIGESNVGKSSIILRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLAIWDTAGQE 70
Query: 73 RFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRD 132
RF TLT SYYR G ILVYDVT R TF L + W E+ Y D +K++VGNK+D
Sbjct: 71 RFRTLTPSYYRDGQGAILVYDVTDRITFMKLET-WLNELNTYCNKTDIIKMVVGNKIDLP 129
Query: 133 SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
+ R V+ EEG+ A+ H+ L++E SAK + +K CF++L+ KI++ P L ++
Sbjct: 130 N-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGLWDR 180
>gi|348544653|ref|XP_003459795.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
gi|410906535|ref|XP_003966747.1| PREDICTED: ras-related protein Rab-1A-like [Takifugu rubripes]
Length = 201
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 125/204 (61%), Gaps = 5/204 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + +I +
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATA 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
N + V++S GG CC
Sbjct: 180 GGDKPNLKIDSTPVRQS--GGGCC 201
>gi|67541621|ref|XP_664578.1| hypothetical protein AN6974.2 [Aspergillus nidulans FGSC A4]
gi|40742430|gb|EAA61620.1| hypothetical protein AN6974.2 [Aspergillus nidulans FGSC A4]
gi|259483720|tpe|CBF79342.1| TPA: Rab GTPase SrgA (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 206
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 129/210 (61%), Gaps = 10/210 (4%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVP 179
IL+GNK D + +RAVT E+G LA E FLE SAKN ++++ F +L I ++
Sbjct: 119 ILIGNKCDWEEKRAVTTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASDIKKGMDSS 178
Query: 180 SLLEQGSAVVKNQILKQKEVQESARGGNCC 209
+ GS V I Q GG CC
Sbjct: 179 KPEQTGSQGV--SIDNQASGLSGNAGGKCC 206
>gi|410917514|ref|XP_003972231.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
Length = 202
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 128/204 (62%), Gaps = 4/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAK++ +V+Q F + +I +
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADNLGIPFLETSAKSSTNVEQAFMTMAAEIKKRMGPGATA 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
A K+ + Q + ++ GG CC
Sbjct: 180 GASEKSNVKIQSKPVNTSSGG-CC 202
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 130/209 (62%), Gaps = 18/209 (8%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDS VGKS +LL ++ D TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT RE+F N+ W E++ Y+++ C K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKQ-WLSEIDRYASDSVC-KLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLEQ 184
D + V EE A+ FLE SAK + +V+ F ++ K+ P+ E+
Sbjct: 124 CDLVDSKVVDTEEAKAFAESLGMNFLETSAKESINVETAFLTMSSEIKNKMASQPA-AER 182
Query: 185 GSAV---VKNQILKQKEVQESARGGNCCS 210
S V +K Q ++Q++ +CCS
Sbjct: 183 KSTVHVHMKGQPIQQQQ-------SSCCS 204
>gi|448085540|ref|XP_004195885.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359377307|emb|CCE85690.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
NN YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ V A FLE SA ++ +V+Q F + +I
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|260942787|ref|XP_002615692.1| hypothetical protein CLUG_04574 [Clavispora lusitaniae ATCC 42720]
gi|238850982|gb|EEQ40446.1| hypothetical protein CLUG_04574 [Clavispora lusitaniae ATCC 42720]
Length = 204
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 117/179 (65%), Gaps = 5/179 (2%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGG 58
M +K + SYD K+LL+GDSGVGKS +LL + + + PS TIG+DFKI+ + G
Sbjct: 1 MSAKAPSRSYDMIMKLLLVGDSGVGKSCLLLRFVEDKFN-PSFITTIGIDFKIRTIESNG 59
Query: 59 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQ 118
K++KL +WDTAGQERF T+T++YYRGA GI+L+YDVT TF N+ + W + V ++ N+
Sbjct: 60 KKIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDARTFENVEN-WFQTVTQHA-NE 117
Query: 119 DCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
D LVGNK D + R V+RE+G LA FLE SAK E+V+ F +L I E
Sbjct: 118 DAQIFLVGNKSDDEENRQVSREQGQQLASSLNIPFLEASAKTNENVESIFYELASLIQE 176
>gi|432953336|ref|XP_004085355.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 127/205 (61%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D + + V A FLE SAK+ +V+Q F + +I + +
Sbjct: 120 GNKCDLTTRKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATA 179
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G+A N ++ K V S G CC
Sbjct: 180 GAAEKSNVKIQSKPVNPSP--GGCC 202
>gi|227603|prf||1707300A guanine nucleotide binding protein
Length = 208
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 126/211 (59%), Gaps = 12/211 (5%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N +DY FK+LLIGDS VGKS LL +S D TIGVDFKI+ + V GK +KL I
Sbjct: 2 SNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD+T E+F N+ W E++ Y+ N +LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLDEIDRYA-NDSVRNVLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV-----PS 180
GNK D RAV AQE FLE SAK + +V++ F + I + +
Sbjct: 120 GNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAA 179
Query: 181 LLEQGSAVVKNQILKQKEV-QESARGGNCCS 210
L + S VV+ +K + + QE + CCS
Sbjct: 180 LERKPSNVVQ---MKGRPIQQEQQKSSRCCS 207
>gi|451847505|gb|EMD60812.1| hypothetical protein COCSADRAFT_97517 [Cochliobolus sativus ND90Pr]
Length = 206
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 131/209 (62%), Gaps = 8/209 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G+ +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +FTN+ + W VE ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRT-WFANVEQHAT-EGVNK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE--VPS 180
IL+GNK D + +RAV+ E+G LA E FLE SAK+ +V + F L I + + +
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSLAGDIKKRLIDT 178
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
+A K + Q + + GG CC
Sbjct: 179 ARTDQTATPKVDVSGQ-DGGNAGMGGKCC 206
>gi|343424907|emb|CBQ68445.1| probable GTP-binding protein ypt1 [Sporisorium reilianum SRZ2]
Length = 208
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 130/210 (61%), Gaps = 19/210 (9%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 67
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +TFTN+ W +E++ Y+ + K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAC-EGVNKLLVGNK 125
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D +++ V A + + FLE SAK+ +V+Q F + +I + GS+
Sbjct: 126 SDLTNKKVVEYATAKEFADQLQIPFLETSAKSATNVEQAFLTMAKQIKD-----RMGSST 180
Query: 189 VKNQ-----ILK----QKEVQESARGGNCC 209
V NQ LK Q Q+SA G CC
Sbjct: 181 VNNQAGGKSTLKVGAGQNVSQQSA--GGCC 208
>gi|126134463|ref|XP_001383756.1| GTP-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
gi|126095905|gb|ABN65727.1| GTP-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
Length = 208
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
NN YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ V A FLE SA ++ +V+Q F + +I
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|2245111|emb|CAB10533.1| GTP-binding RAB1C like protein [Arabidopsis thaliana]
Length = 221
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 123/202 (60%), Gaps = 8/202 (3%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL IWDTA
Sbjct: 25 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 84
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+ YDVT E+F N+ W E++ Y++ ++ K+LVGNK
Sbjct: 85 GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNKC 142
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQGSAV 188
D S++ V+ E A E FLE SAKN +V++ F + I + S GS
Sbjct: 143 DLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSKP 202
Query: 189 VKNQILKQKEVQESARGGNCCS 210
QI Q Q+S CCS
Sbjct: 203 PTVQIRGQPVNQQSG----CCS 220
>gi|68468983|ref|XP_721550.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|68469532|ref|XP_721279.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|15077428|gb|AAK83158.1|AF330211_1 small GTP-binding protein Ypt1p [Candida albicans]
gi|46443188|gb|EAL02472.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|46443470|gb|EAL02752.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|238879175|gb|EEQ42813.1| GTP-binding protein YPT1 [Candida albicans WO-1]
Length = 207
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
NN YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ V A FLE SA ++ +V+Q F + +I
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|115495993|ref|NP_001069701.1| ras-related protein Rab-1B [Bos taurus]
gi|110832072|sp|Q2HJH2.1|RAB1B_BOVIN RecName: Full=Ras-related protein Rab-1B
gi|88682888|gb|AAI05394.1| RAB1B, member RAS oncogene family [Bos taurus]
gi|440907365|gb|ELR57519.1| Ras-related protein Rab-1B [Bos grunniens mutus]
Length = 201
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM---AAEIKKRMGPG 176
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+A + LK GG CC
Sbjct: 177 AASGGERPNLKIDSTPVKQAGGGCC 201
>gi|195448332|ref|XP_002071611.1| GK25049 [Drosophila willistoni]
gi|194167696|gb|EDW82597.1| GK25049 [Drosophila willistoni]
Length = 204
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 134/208 (64%), Gaps = 6/208 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++GNK D +R V++E G +A+EH F+E SAK+ ++++ F +L IL+ S E
Sbjct: 119 ILGNKCDMTDKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRE 178
Query: 184 QGSAVVKNQILKQKEVQESARGGN-CCS 210
SA +++ + + A G N CC+
Sbjct: 179 --SAENPERVVIDRRNNDKAPGYNKCCA 204
>gi|388498284|gb|AFK37208.1| unknown [Medicago truncatula]
Length = 203
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 122/205 (59%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+ LIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLPLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + RAV+ + A + F+E SAK+ +V+ F + I + + Q
Sbjct: 120 GNKSDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
SA Q Q + CCS
Sbjct: 178 SANNARPPTVQIRGQPVGQKSGCCS 202
>gi|320169952|gb|EFW46851.1| Rab8a protein [Capsaspora owczarzaki ATCC 30864]
Length = 214
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 116/161 (72%), Gaps = 3/161 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
+YDY FK+LLIGDSGVGK+ +L ++ + TIG+DFKI+ + + GK++KL IWD
Sbjct: 4 AYDYLFKLLLIGDSGVGKTCVLFRFSDDAFNATFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRGA GI+LVYDVT+ +TF N+ + W + +E +++ +D K+++GN
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDVTQDKTFENIKN-WIRNIEQHAS-EDVEKMILGN 121
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
K D D +R VT+E G LA+E+ F E SAK +V++ F
Sbjct: 122 KCDVDDKRVVTKERGEQLAREYNVRFFETSAKANINVEEAF 162
>gi|351725923|ref|NP_001237621.1| uncharacterized protein LOC100499898 [Glycine max]
gi|255627505|gb|ACU14097.1| unknown [Glycine max]
Length = 201
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 121/204 (59%), Gaps = 6/204 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YDY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + V A E FLE SAK++ V+Q F L E+ +
Sbjct: 120 GNKSDLVDNKVVDSLTAKAFADELGIPFLETSAKDSISVEQAF---LTMTAEIKKKMGSQ 176
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+ K+ Q + Q + NCC
Sbjct: 177 TTAGKSAETVQMKGQPIPQKSNCC 200
>gi|414587082|tpg|DAA37653.1| TPA: ypt-like protein isoform 1 [Zea mays]
gi|414587083|tpg|DAA37654.1| TPA: ypt-like protein isoform 2 [Zea mays]
Length = 208
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 127/211 (60%), Gaps = 12/211 (5%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N +DY FK+LLIGDS VGKS LL +S D TIGVDFKI+ + V GK +KL I
Sbjct: 2 SNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD+T E+F N+ W E++ Y+ N K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLDEIDRYA-NDSVRKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV-----PS 180
GNK D RAV A+E FLE SAK + +V++ F + I + +
Sbjct: 120 GNKCDLAENRAVDTSVAQAYAEEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAA 179
Query: 181 LLEQGSAVVKNQILKQKEV-QESARGGNCCS 210
L + S VV+ +K + + QE + CCS
Sbjct: 180 LERKPSNVVQ---MKGRPIQQEQQKSSRCCS 207
>gi|452845509|gb|EME47442.1| hypothetical protein DOTSEDRAFT_69383 [Dothistroma septosporum
NZE10]
Length = 201
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 125/208 (60%), Gaps = 13/208 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V A FLE SAKN +V+Q F + +I E G
Sbjct: 120 GNKSDMSDKKVVEYAVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE-----RMG 174
Query: 186 SAVVKN----QILKQKEVQESARGGNCC 209
+ V N Q+ + VQ + GG CC
Sbjct: 175 NTTVNNKPTVQVGQGSNVQSGSAGG-CC 201
>gi|354544141|emb|CCE40864.1| hypothetical protein CPAR2_109020 [Candida parapsilosis]
Length = 206
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
NN YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ V A FLE SA ++ +V+Q F + +I
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|116786670|gb|ABK24196.1| unknown [Picea sitchensis]
Length = 213
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 123/187 (65%), Gaps = 10/187 (5%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+G K +KL I
Sbjct: 2 SYAYLFKYIVIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIGNKPIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L++ W ++ ++ N + +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAT-WLEDARQHA-NSNMTIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D D RAV+ EEG A+EH +F+E SAK ++V++ F + KI + +E+G
Sbjct: 118 GNKCDLDHRRAVSTEEGAQFAKEHGLVFMETSAKTAQNVEEAFINTAAKIYQ---KIEEG 174
Query: 186 SAVVKNQ 192
V N+
Sbjct: 175 IFDVSNE 181
>gi|41055496|ref|NP_957436.1| ras-related protein Rab-1B [Danio rerio]
gi|28839092|gb|AAH47816.1| Zgc:56049 [Danio rerio]
gi|182889374|gb|AAI65006.1| Zgc:56049 protein [Danio rerio]
Length = 201
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 126/205 (61%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTM---AAEIKKRMGPG 176
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+ ++ LK + GG CC
Sbjct: 177 ATTGGDKPNLKIESTPVRQSGGGCC 201
>gi|358248394|ref|NP_001239874.1| uncharacterized protein LOC100796206 [Glycine max]
gi|414832|gb|AAA34003.1| Rab7p [Glycine max]
Length = 201
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 122/204 (59%), Gaps = 6/204 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YDY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDTVC-KLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + V A E FLE SAK++ +V+Q F L E+ +
Sbjct: 120 GNKSDLVDNKVVDSLTAKAFADELGIPFLETSAKDSINVEQAF---LTMAAEIKKKMGSQ 176
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+ K+ Q + Q + NCC
Sbjct: 177 TTTGKSAESVQMKGQPIPQKSNCC 200
>gi|55742328|ref|NP_001007162.1| ras-related protein Rab-1A [Danio rerio]
gi|29571131|gb|AAH50239.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|38541759|gb|AAH62857.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|182889992|gb|AAI65910.1| Rab1a protein [Danio rerio]
Length = 201
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 125/206 (60%), Gaps = 9/206 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLE 183
GNK D +++ V A FLE SAKN +V+Q F + +I + P
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATA 179
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
GS + +K + G CC
Sbjct: 180 GGS----EKTMKIESTPVKPASGGCC 201
>gi|50292669|ref|XP_448767.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528079|emb|CAG61730.1| unnamed protein product [Candida glabrata]
Length = 206
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 135/216 (62%), Gaps = 24/216 (11%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIG+SGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRG+HGII+VYDVT +E+F N +W +E++ Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATST-VLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ- 184
GNK D +R V + A+ +K FLE SA ++ +V++ F + +I E S+ +Q
Sbjct: 120 GNKCDLADKRVVEYDVAKEFAEANKMPFLETSALDSTNVEEAFLTMARQIKE--SMTQQN 177
Query: 185 -----------GSAVVKNQILKQKEVQESARGGNCC 209
G+ +K Q L Q G +CC
Sbjct: 178 MNESQQKKNDKGNVNLKGQSLTQS-------GSSCC 206
>gi|387017930|gb|AFJ51083.1| ras-related protein Rab-1A-like [Crotalus adamanteus]
Length = 201
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E+E Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQ-WLQEIERYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLSIPFLETSAKNATNVEQSFMTM---AAEIKKRMGPG 176
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+ ++ LK GG CC
Sbjct: 177 ATAGGDRPNLKIDSTPVKQGGGGCC 201
>gi|388855844|emb|CCF50628.1| probable SEC4-like Rab/GTPase [Ustilago hordei]
Length = 208
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 134/209 (64%), Gaps = 8/209 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLT 64
N YD+ K+LLIGDSGVGKS +LL ++ PS TIG+DFKI+ + + GKR+KL
Sbjct: 3 NPHYDFLIKLLLIGDSGVGKSCLLLRFCDDA-WTPSFITTIGIDFKIRTIELDGKRIKLQ 61
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+T++YYRGA GI+LV+DVT +++F N+ + W +E +++ + KIL
Sbjct: 62 IWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRT-WHANIEQHAS-EGVSKIL 119
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVPSL 181
+GNK D + +RAVT E+G LA+E ++E SAK+ +V++ F +L ++ L +
Sbjct: 120 IGNKSDWEEKRAVTTEQGEELAKELGIPYIETSAKSNSNVEEAFFNLAREVKTRLIDTAA 179
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCCS 210
+ Q S + + ++ G CCS
Sbjct: 180 VTQASPAAASANVNVNSAPKTGGAGGCCS 208
>gi|224284051|gb|ACN39763.1| unknown [Picea sitchensis]
Length = 216
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 132/215 (61%), Gaps = 9/215 (4%)
Query: 2 GSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKR 60
G G YDY K+LLIGDSGVGKS +LL +S TIG+DFKI+ + + GKR
Sbjct: 4 GPARGRADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKR 63
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
+KL IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ +
Sbjct: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NV 121
Query: 121 VKILVGNKVDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKI 175
KILVGNK D D S+RAV G LA E F E SAK +V+Q F +D+ ++
Sbjct: 122 NKILVGNKADMDESKRAVPTARGQALADEFGIKFFETSAKTNLNVEQVFFTIARDIKQRL 181
Query: 176 LEVPSLLEQGSAVVKNQILKQKEVQESARGGNCCS 210
E + +E + + N+ K ++A +CC+
Sbjct: 182 AESDTKVEPQTIKI-NKPDPAKGPGKAAERSSCCT 215
>gi|168028754|ref|XP_001766892.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681871|gb|EDQ68294.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 125/207 (60%), Gaps = 8/207 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL +S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V+ F +D+ ++ E S E
Sbjct: 130 ADMDESKRAVPTAKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKQRLAESDSKPE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCCS 210
+ L Q +CCS
Sbjct: 190 AAKDAKPDVKLLAGNAQTKPASASCCS 216
>gi|453087322|gb|EMF15363.1| GTP-binding protein ypt1 [Mycosphaerella populorum SO2202]
Length = 201
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 125/208 (60%), Gaps = 13/208 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V A FLE SAKN +V+Q F + +I E G
Sbjct: 120 GNKSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE-----RMG 174
Query: 186 SAVVKN----QILKQKEVQESARGGNCC 209
+ V N Q+ + VQ + GG CC
Sbjct: 175 NTTVNNKPTVQVGQGSNVQSGSAGG-CC 201
>gi|126697336|gb|ABO26625.1| Ras-related protein Rab-1A [Haliotis discus discus]
Length = 205
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 127/208 (61%), Gaps = 12/208 (5%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL----EVPSL 181
GNK D +++ V A + FLE SAKN +V+Q F + +I V +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPVTAA 182
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCC 209
E +V N K+ GG CC
Sbjct: 183 SENKPSVKINSSTPVKQ-----GGGGCC 205
>gi|448519756|ref|XP_003868152.1| Ypt1 protein [Candida orthopsilosis Co 90-125]
gi|380352491|emb|CCG22717.1| Ypt1 protein [Candida orthopsilosis]
Length = 207
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
NN YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ V A FLE SA ++ +V+Q F + +I
Sbjct: 120 GNKADLADKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|224284454|gb|ACN39961.1| unknown [Picea sitchensis]
gi|224284508|gb|ACN39987.1| unknown [Picea sitchensis]
Length = 216
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 127/207 (61%), Gaps = 9/207 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL +S TIG+DFKI++ + GKR+KL IWDT
Sbjct: 12 YDYLVKLLLIGDSGVGKSCLLLRFTDDSFTTSFITTIGIDFKIRIFELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYR A GI+LVYDVT +F N+ + W K +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRNAMGILLVYDVTDESSFNNIRN-WIKNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV+ G LA E+ F E SAK +V+Q F KD++ ++ E
Sbjct: 130 ADMDESKRAVSTARGQELADEYGIKFFETSAKTNINVEQAFFSIAKDIMKRLSETDFRPA 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCCS 210
+ + N + S++ CCS
Sbjct: 190 PQTITINNPNTAEGPASASSK-SRCCS 215
>gi|156616376|ref|NP_001096112.1| uncharacterized protein LOC100124616 [Danio rerio]
gi|152012662|gb|AAI50405.1| Zgc:171927 protein [Danio rerio]
Length = 210
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 111/163 (68%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMEGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQ-WLEEIDRYAC-ENVSKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D S++ V M + K LE SAKN +V++ F
Sbjct: 120 GNKSDLSSKKVVDFTTAMEFTESLKIPLLETSAKNANNVEKAF 162
>gi|170592955|ref|XP_001901230.1| Ras-related protein Rab-10 [Brugia malayi]
gi|158591297|gb|EDP29910.1| Ras-related protein Rab-10, putative [Brugia malayi]
Length = 226
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 129/208 (62%), Gaps = 8/208 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ YD FK+LLIGDSGVGK+ IL ++ + TIG+DFKIK + + GK++KL
Sbjct: 24 MAKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 83
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + ++ +++ +D K+
Sbjct: 84 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVEKM 141
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
L+GNK D R V+RE G +A +H FLE SAK + + F DL IL+ +
Sbjct: 142 LLGNKCDMAERRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDKMPIKN 201
Query: 184 QGSAVVKNQILKQKEVQESARGG--NCC 209
+G +K ++ E Q + G +CC
Sbjct: 202 EG---MKQPTIRPAEPQNNVAIGRLSCC 226
>gi|268560844|ref|XP_002646304.1| C. briggsae CBR-UNC-108 protein [Caenorhabditis briggsae]
Length = 214
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 116/170 (68%), Gaps = 7/170 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L+S W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTS-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ R V REEG A+EH +F+E SAK +V++ F D +I
Sbjct: 118 GNKSDLEARREVKREEGEAFAREHGLVFMETSAKTANNVEEAFIDTAKEI 167
>gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus]
Length = 253
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 128/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL
Sbjct: 53 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQR 112
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 113 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 170
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 171 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 230
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S GG CC
Sbjct: 231 GGAEKSNVKIQSTPVKQS--GGGCC 253
>gi|258571511|ref|XP_002544559.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
gi|237904829|gb|EEP79230.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
Length = 1102
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 129/210 (61%), Gaps = 12/210 (5%)
Query: 5 VGNN-SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLK 62
V NN YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +K
Sbjct: 900 VANNFRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVK 959
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K
Sbjct: 960 LQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNK 1017
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
+LVGNK D + ++AV A FLE SAKN +V+Q F + +I E
Sbjct: 1018 LLVGNKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE----- 1072
Query: 183 EQGSAVVKNQ---ILKQKEVQESARGGNCC 209
G+A V N+ + Q + +S G CC
Sbjct: 1073 RMGTATVNNKPTVQVGQGQGVQSGSAGGCC 1102
>gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis]
gi|224284661|gb|ACN40063.1| unknown [Picea sitchensis]
Length = 202
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V + A E FLE SAKN +V+ F + +I
Sbjct: 120 GNKNDLTAKKVVDYQTAKAFADEIGIPFLETSAKNAINVEDAFMTMAAEI 169
>gi|328874798|gb|EGG23163.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 205
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 115/178 (64%), Gaps = 10/178 (5%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
+D+ FKILLIGDSGVGKS +LL +S D TIGVDFKIK L + GK +KL IWDT
Sbjct: 5 HDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGA GIILVYD T +++F N+ W E++ Y+ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQ-WMGEIDRYAC-ENVNKLLVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF-------KDLLYKILEVP 179
D +E+ V + A+ F+E SAKN +V++CF K+ L I E P
Sbjct: 123 TDLVNEKVVDTNQAKSFAESMGIPFIETSAKNATNVEECFCSMARDIKNRLADIQETP 180
>gi|195398659|ref|XP_002057938.1| GJ15815 [Drosophila virilis]
gi|194150362|gb|EDW66046.1| GJ15815 [Drosophila virilis]
Length = 204
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 134/208 (64%), Gaps = 6/208 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++GNK D +R V++E G +A+EH F+E SAK+ ++++ F +L IL+ S E
Sbjct: 119 ILGNKCDMGDKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRE 178
Query: 184 QGSAVVKNQILKQKEVQESARGGN-CCS 210
SA +++ + + A G N CC+
Sbjct: 179 --SAENPERVVIDRANSDKAPGYNKCCA 204
>gi|402594067|gb|EJW87994.1| rab family protein 10 [Wuchereria bancrofti]
Length = 203
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 129/208 (62%), Gaps = 8/208 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ YD FK+LLIGDSGVGK+ IL ++ + TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + ++ +++ +D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
L+GNK D R V+RE G +A +H FLE SAK + + F DL IL+ +
Sbjct: 119 LLGNKCDMAERRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDKMPIKN 178
Query: 184 QGSAVVKNQILKQKEVQESARGG--NCC 209
+G +K ++ E Q + G +CC
Sbjct: 179 EG---MKQPTIRPAEPQSNVAIGRLSCC 203
>gi|391344946|ref|XP_003746755.1| PREDICTED: ras-related protein Rab-35-like [Metaseiulus
occidentalis]
Length = 203
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 124/206 (60%), Gaps = 7/206 (3%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTIW 66
N YD+ FK+L+IGDSGVGKSS+LL N+ + TIGVDFKI+ + V G+R+KL IW
Sbjct: 2 NHYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGNYITTIGVDFKIRTIEVDGERVKLQIW 61
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCV-KILV 125
DTAGQERF T+TS+YYRG HG+I+VYDVT E+F N+ W E++ N D V +ILV
Sbjct: 62 DTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVKR-WLHEID---QNCDVVNRILV 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV-PSLLEQ 184
GNK D + V E+ A E SAK+ +V++ F + +L+ L
Sbjct: 118 GNKNDDPQRKVVLTEDAQAFADRMNIELFETSAKDNFNVEEMFNAVTRMVLKTKKEELRD 177
Query: 185 GSAVVKNQILKQKEVQESARGGNCCS 210
KN ++ ++ Q+ +G CCS
Sbjct: 178 NLMTSKNDNVRLRKNQKGKKGSKCCS 203
>gi|410730291|ref|XP_003671325.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
gi|401780143|emb|CCD26082.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
Length = 210
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 120/172 (69%), Gaps = 3/172 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIG+SGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRG+HGII+VYDVT +++F + +W +E++ Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFDGV-KMWLQEIDRYATST-VLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D + +R V + A +K FLE SA N+ +V++ F + +I E
Sbjct: 120 GNKCDLEDKRVVEYDVAKEFADSNKMPFLETSALNSTNVEEAFLTMARQIKE 171
>gi|301117468|ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|2500076|sp|Q01890.1|YPT1_PHYIN RecName: Full=Ras-like GTP-binding protein YPT1
gi|940432|gb|AAB40355.1| ras related protein PiYpt1 [Phytophthora infestans]
gi|262107811|gb|EEY65863.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|348688420|gb|EGZ28234.1| hypothetical protein PHYSODRAFT_309136 [Phytophthora sojae]
Length = 201
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 115/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLHEIDRYAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++R V+ + A+ FLE SAKN +V++ F + +I
Sbjct: 120 GNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQI 169
>gi|289742367|gb|ADD19931.1| GTPase Rab18 [Glossina morsitans morsitans]
Length = 195
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 116/169 (68%), Gaps = 8/169 (4%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSV---HDPSPTIGVDFKIKLLTVGGKRLKLTIWD 67
D + K+L+IG+SGVGKSS++ + + HD TIG+DFK K++ + G KL +WD
Sbjct: 4 DKAIKLLVIGESGVGKSSLIRRFVEDKFDEYHDV--TIGMDFKSKIMNIDGVDYKLALWD 61
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAG ERF +LT S+YR A G ILVYD+T RE+ L + W E+E YS N + I+VGN
Sbjct: 62 TAGAERFRSLTPSFYRKALGAILVYDITSRESLAKLEA-WFTELENYSDNPNIATIVVGN 120
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL 176
K+ D+ERAV+REEG+ A++H+ LFLE SAKN E V F+D++ KI+
Sbjct: 121 KI--DNERAVSREEGVKFARKHRSLFLETSAKNDEFVADVFRDIVEKIV 167
>gi|343424940|emb|CBQ68478.1| probable SEC4-like Rab/GTPase [Sporisorium reilianum SRZ2]
Length = 208
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 136/210 (64%), Gaps = 10/210 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLT 64
N YD+ K+LLIGDSGVGKS +LL ++ PS TIG+DFKI+ + + GKR+KL
Sbjct: 3 NPHYDFLIKLLLIGDSGVGKSCLLLRFCDDA-WTPSFITTIGIDFKIRTIELDGKRIKLQ 61
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+T++YYRGA GI+LV+DVT +++F N+ + W +E +++ + KIL
Sbjct: 62 IWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRT-WHANIEQHAS-EGVSKIL 119
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPS 180
+GNK D + +RAVT E+G LA+E ++E SAK+ +V++ F +++ ++++ +
Sbjct: 120 IGNKSDWEEKRAVTTEQGEELARELGIPYIETSAKSNANVEEAFFHLAREVKTRLIDTAA 179
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCCS 210
+ + A + + A GG CCS
Sbjct: 180 VTQASPAAATGNVNVNSAPKTGAAGG-CCS 208
>gi|17507539|ref|NP_491233.1| Protein UNC-108 [Caenorhabditis elegans]
gi|308485248|ref|XP_003104823.1| CRE-UNC-108 protein [Caenorhabditis remanei]
gi|308257521|gb|EFP01474.1| CRE-UNC-108 protein [Caenorhabditis remanei]
gi|341876619|gb|EGT32554.1| CBN-UNC-108 protein [Caenorhabditis brenneri]
gi|341895318|gb|EGT51253.1| hypothetical protein CAEBREN_21630 [Caenorhabditis brenneri]
gi|373219190|emb|CCD66422.1| Protein UNC-108 [Caenorhabditis elegans]
Length = 214
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 116/170 (68%), Gaps = 7/170 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L+S W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTS-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ R V REEG A+EH +F+E SAK +V++ F D +I
Sbjct: 118 GNKSDLEARREVKREEGEAFAREHGLVFMETSAKTAANVEEAFIDTAKEI 167
>gi|440291312|gb|ELP84581.1| hypothetical protein EIN_171560 [Entamoeba invadens IP1]
Length = 207
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 112/168 (66%), Gaps = 3/168 (1%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL ++ D TIGVDFKIK + + G +KL IWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQINGLNVKLQIWDTA 65
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGA GII+VY V +TF N+ W +E+E Y++ + +K+L+GNK
Sbjct: 66 GQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQ-WLQEIERYAS-ESVIKLLIGNKC 123
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
D + ERAVT E+G LA F+E SAK +V + F + I++
Sbjct: 124 DLEDERAVTVEQGQELANSLNVSFMESSAKKALNVDELFNKIATDIMK 171
>gi|398390616|ref|XP_003848768.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339468644|gb|EGP83744.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 201
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 125/208 (60%), Gaps = 13/208 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V A FLE SAKN +V+Q F + +I E G
Sbjct: 120 GNKSDMADKKVVEYTVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQIKE-----RMG 174
Query: 186 SAVVKN----QILKQKEVQESARGGNCC 209
+ V N Q+ + VQ + GG CC
Sbjct: 175 NTTVNNKPTVQVGQGSNVQSGSAGG-CC 201
>gi|226486|prf||1515250A rab1B protein
Length = 201
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTM---AAEIKKRMGPG 176
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+A + LK + G CC
Sbjct: 177 AASGGERPNLKIDSTPVKSASGGCC 201
>gi|399163139|gb|AFP33145.1| rab-2, partial [Caenorhabditis elegans]
Length = 213
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 116/170 (68%), Gaps = 7/170 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 1 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTIDGKQIKLQI 58
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L+S W ++ +S N + V +L+
Sbjct: 59 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTS-WLEDARQHS-NSNMVIMLI 116
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ R V REEG A+EH +F+E SAK +V++ F D +I
Sbjct: 117 GNKSDLEARREVKREEGEAFAREHGLVFMETSAKTAANVEEAFIDTAKEI 166
>gi|225718924|gb|ACO15308.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 125/206 (60%), Gaps = 9/206 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +++F NL W +E++ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQ-WLQEIDRYAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLE 183
GNK D +++ V A + FLE SAKN +V+Q F + +I P
Sbjct: 120 GNKCDLTTKKVVDYTTAKEYADQLSMPFLEASAKNATNVEQAFMTMAAEIKNRVGPPAPS 179
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
S VK + VQ S G CC
Sbjct: 180 GPSGQVK---IDSTPVQ-SKSGSGCC 201
>gi|366991921|ref|XP_003675726.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS 4309]
gi|342301591|emb|CCC69361.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS 4309]
Length = 211
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 124/184 (67%), Gaps = 5/184 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIG+SGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRG+HGII+VYDVT +++F N +W +E++ Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQDSF-NGVKMWLQEIDRYATST-VLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL--LE 183
GNK D +R V + A +K FLE SA N+ +V++ F + +I E S +E
Sbjct: 120 GNKCDLTDKRVVEYDVAKEFADANKMPFLETSALNSTNVEEAFLTMARQIKESMSQQKME 179
Query: 184 QGSA 187
G A
Sbjct: 180 DGGA 183
>gi|449492192|ref|XP_004175545.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Taeniopygia
guttata]
Length = 170
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/144 (54%), Positives = 103/144 (71%), Gaps = 2/144 (1%)
Query: 43 PTIGVDFKIKLLTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTN 102
P GVDFK+K ++V G + KL IWDTAGQERF TLT SYYRGA G+ILVYDVTRR+TF
Sbjct: 2 PISGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVK 61
Query: 103 LSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTE 162
L + W E+E Y T D V++LVGNK+D+++ R V R EG+ A++H LF+E SAK +
Sbjct: 62 LDN-WLNELETYCTRNDIVQMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCD 119
Query: 163 DVKQCFKDLLYKILEVPSLLEQGS 186
V+ F++L+ KI++ P L E S
Sbjct: 120 GVQCAFEELVEKIIQTPGLWESES 143
>gi|359497565|ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
Length = 207
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 112/166 (67%), Gaps = 3/166 (1%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL IWDTA
Sbjct: 10 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 69
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LVGNK
Sbjct: 70 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNKC 127
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
D + + V+ E A E F+E SAKN +V+Q F + +I
Sbjct: 128 DLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 173
>gi|357445237|ref|XP_003592896.1| Ras-like protein [Medicago truncatula]
gi|92893897|gb|ABE91947.1| Ras small GTPase, Rab type [Medicago truncatula]
gi|355481944|gb|AES63147.1| Ras-like protein [Medicago truncatula]
Length = 203
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 123/207 (59%), Gaps = 7/207 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +N YDY FK+L+IGDS VGKS +LL +S D TIGVDFKI+ + + GK KL
Sbjct: 1 MSSNEYDYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTAKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ N K+
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDIESFNNVKQ-WLHEIDRYA-NHSVSKL 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
LVGNK D + V A E FLE SAK++ +V+Q F + +I
Sbjct: 119 LVGNKCDLTDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQP 178
Query: 184 QGSAVVKNQI-LKQKEVQESARGGNCC 209
GS + +K + +Q++ NCC
Sbjct: 179 TGSKSAAESVQMKGQPIQQNT---NCC 202
>gi|224119896|ref|XP_002331089.1| predicted protein [Populus trichocarpa]
gi|118486589|gb|ABK95133.1| unknown [Populus trichocarpa]
gi|222872817|gb|EEF09948.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 124/208 (59%), Gaps = 16/208 (7%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIW 66
N YDY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + GK KL IW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTSKLQIW 62
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ + C K+LVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVG 120
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLL 182
NK D + V + A E FLE SAK++ +V+Q F ++ K+ P+
Sbjct: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMSNQPTAN 180
Query: 183 EQ-GSAVVKNQILKQKEVQESARGGNCC 209
G+ +K Q ++QK NCC
Sbjct: 181 NSTGTVQMKGQPIEQK--------NNCC 200
>gi|388516339|gb|AFK46231.1| unknown [Medicago truncatula]
Length = 215
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 129/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV EG LA E+ F E SAK +V++ F +D+ ++ + S E
Sbjct: 130 ADMDESKRAVPTSEGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTVSSTE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
S + NQ + ++A+ CC
Sbjct: 190 PQSIKI-NQQDQAANGGQAAQKSACC 214
>gi|281203215|gb|EFA77416.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 203
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 115/178 (64%), Gaps = 10/178 (5%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
+D+ FKILLIGDSGVGKS +LL +S D TIGVDFKIK L + GK +KL IWDT
Sbjct: 5 HDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGA GIILVYD T +++F N+ W E++ Y+ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQ-WMGEIDRYAC-ENVNKLLVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF-------KDLLYKILEVP 179
D +E+ V + A+ F+E SAKN +V++CF K+ L I E P
Sbjct: 123 TDLVNEKVVDTNQAKSFAESMGIPFIETSAKNATNVEECFCSMARDIKNRLADIQEAP 180
>gi|195113911|ref|XP_002001511.1| GI10837 [Drosophila mojavensis]
gi|193918105|gb|EDW16972.1| GI10837 [Drosophila mojavensis]
Length = 205
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 128/207 (61%), Gaps = 10/207 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +E+F N+ W +E+E Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVPSLL 182
GNK D +++ V A + FLE SAK+ +V+Q F + +I + PS
Sbjct: 123 GNKSDLTTKKVVDHTTAAEYAHQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSA 182
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
++ VK + Q E+ R G CC
Sbjct: 183 TDNASKVK---IDQGRPVENTRSG-CC 205
>gi|145552362|ref|XP_001461857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834352|emb|CAI44523.1| rab_B52 [Paramecium tetraurelia]
gi|124429693|emb|CAK94484.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 129/209 (61%), Gaps = 4/209 (1%)
Query: 3 SKVGNNS-YDYSFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKR 60
S+ GN+ YD+ K+++IGDSGVGK+++L T+GVDFKIK + GK+
Sbjct: 2 SRQGNSQDYDWLVKVIVIGDSGVGKTNVLSQFCDQKFSITHMATLGVDFKIKTIEAEGKK 61
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKL IWDTAGQERF T+T +YY+GA G+IL Y V R++F N+ W K ++ + + D
Sbjct: 62 LKLQIWDTAGQERFRTITKTYYKGAQGVILTYSVIDRQSFQNVDG-WLKSIQENTNSSDV 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+L+GNK D +ER VT EEGM L+Q+ F E SAK+ ++ + F++L +I++ S
Sbjct: 121 QLVLLGNKADMSAERKVTLEEGMKLSQQFNIPFFETSAKSNMNINEAFQELSQRIIQTLS 180
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
+ Q + +N +K ++ + G CC
Sbjct: 181 KM-QANDENRNLNIKPNGGEDKHKTGPCC 208
>gi|385303857|gb|EIF47907.1| member ras oncogene family [Dekkera bruxellensis AWRI1499]
Length = 202
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 110/163 (67%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
NN YDY FK+LLIGDSGVGKS +LL N+ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFAENTYTQDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F +++ W +E++ Y+T+ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNDVNQ-WLQEIDRYATS-GVQKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D ++ V A F+E SA + +V+Q F
Sbjct: 120 GNKCDLTDKKVVDYAVAKEFADSRGIPFIETSAAESTNVEQAF 162
>gi|392935497|pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In Complex With
The Coiled- Coil Domain Of Lida From Legionella
Pneumophila
Length = 196
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 10 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 69
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 70 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 127
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 128 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 177
>gi|388490950|gb|AFK33541.1| unknown [Medicago truncatula]
Length = 122
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 98/121 (80%)
Query: 90 LVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEH 149
+VYDVTRRETFTNLS +WAKE++LYSTNQDC+K+LVGNKVD++SERAVT++E + A+++
Sbjct: 1 MVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVTKKEAVDFARQY 60
Query: 150 KCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVKNQILKQKEVQESARGGNCC 209
CL+ ECSAK +V+QCF++L+ KIL+ PSLL +GS+ VK I KQK + A +CC
Sbjct: 61 GCLYTECSAKTRVNVEQCFEELVMKILDTPSLLAEGSSGVKKNIFKQKPQEFDASPSSCC 120
Query: 210 S 210
S
Sbjct: 121 S 121
>gi|296083547|emb|CBI23542.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 112/166 (67%), Gaps = 3/166 (1%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 60
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNKC 118
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
D + + V+ E A E F+E SAKN +V+Q F + +I
Sbjct: 119 DLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 164
>gi|189204310|ref|XP_001938490.1| GTP-binding protein SAS1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330920200|ref|XP_003298922.1| hypothetical protein PTT_09780 [Pyrenophora teres f. teres 0-1]
gi|187985589|gb|EDU51077.1| GTP-binding protein SAS1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311327651|gb|EFQ92986.1| hypothetical protein PTT_09780 [Pyrenophora teres f. teres 0-1]
Length = 206
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 130/209 (62%), Gaps = 8/209 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G+ +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +FTN+ + W VE ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRT-WFSNVEQHAT-EGVNK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE--VPS 180
IL+GNK D + +RAV+ E+G LA E FLE SAK+ +V + F L I + + +
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSLASDIKKRLIDT 178
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
+A K + + + GG CC
Sbjct: 179 ARTDQTAAPKVDV-GGPDSGNAGMGGKCC 206
>gi|410900346|ref|XP_003963657.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
gi|312987462|gb|ADR31264.1| Rab1 [Sciaenops ocellatus]
Length = 203
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 126/206 (61%), Gaps = 7/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLE 183
GNK D +++ V A FLE SAKN +V+Q F + +I + P
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATA 179
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
G ++ V+ S+ G CC
Sbjct: 180 GGGEKPNVKLTPGTTVKPSS--GGCC 203
>gi|398017462|ref|XP_003861918.1| small GTP-binding protein Rab1, putative [Leishmania donovani]
gi|322500146|emb|CBZ35221.1| small GTP-binding protein Rab1, putative [Leishmania donovani]
Length = 200
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 110/160 (68%), Gaps = 3/160 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ L + K +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYD T E+F N+ + W E+E Y++ ++ KILVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKT-WLSEIEKYAS-ENVNKILVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D +++AV + A FLE SAKN+ +V++ F
Sbjct: 123 CDLVTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAF 162
>gi|440794437|gb|ELR15598.1| ras-related protein Rab-2A, putative [Acanthamoeba castellanii str.
Neff]
Length = 200
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 115/173 (66%), Gaps = 7/173 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
Y Y FK +++GD+ VGKS +LL VHD TIGV+F + LT+ ++KL I
Sbjct: 18 PYKYLFKYIIVGDTAVGKSCLLLQFTDKRFQPVHDL--TIGVEFGSRTLTIEDNQVKLQI 75
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE+F ++T SYYRGA G +LVYD+TRRETF +L+S W ++ YS N + V +L+
Sbjct: 76 WDTAGQEKFRSITRSYYRGAAGALLVYDITRRETFEHLTS-WLEDCRKYS-NSNIVIMLI 133
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV 178
GNK D +S+R V++EEG A+EH LFLE SAK E+V+Q F + I E
Sbjct: 134 GNKCDLESKRQVSKEEGAAFAKEHNLLFLETSAKTAENVEQAFINTARTIYET 186
>gi|339898641|ref|XP_003392649.1| putative small GTP-binding protein Rab1 [Leishmania infantum JPCM5]
gi|321398437|emb|CBZ08825.1| putative small GTP-binding protein Rab1 [Leishmania infantum JPCM5]
Length = 200
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 110/160 (68%), Gaps = 3/160 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ L + K +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYD T E+F N+ + W E+E Y++ ++ KILVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKT-WLSEIEKYAS-ENVNKILVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D +++AV + A FLE SAKN+ +V++ F
Sbjct: 123 CDLVTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAF 162
>gi|452986636|gb|EME86392.1| hypothetical protein MYCFIDRAFT_72600 [Pseudocercospora fijiensis
CIRAD86]
Length = 201
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 125/208 (60%), Gaps = 13/208 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V A FLE SAKN +V+Q F + +I E G
Sbjct: 120 GNKSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE-----RMG 174
Query: 186 SAVVKN----QILKQKEVQESARGGNCC 209
+ + N Q+ + VQ + GG CC
Sbjct: 175 NTAINNKPTVQVGQGSNVQSGSAGG-CC 201
>gi|326490445|dbj|BAJ84886.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326491645|dbj|BAJ94300.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 120/183 (65%), Gaps = 8/183 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W K +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIKNIEQHASD-NVSKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V+Q F +D+ ++ E S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIQFFETSAKTNMNVEQVFFSIARDIKQRLSEADSKPE 189
Query: 184 QGS 186
G+
Sbjct: 190 GGT 192
>gi|156838990|ref|XP_001643191.1| hypothetical protein Kpol_1011p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156113790|gb|EDO15333.1| hypothetical protein Kpol_1011p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 214
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 131/211 (62%), Gaps = 8/211 (3%)
Query: 2 GSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGK 59
GS G N YD KILLIGDSGVGKS +L+ + + + PS TIG+DFKIK + + GK
Sbjct: 9 GSTNGKN-YDSIMKILLIGDSGVGKSCLLVRFVDDKFN-PSFITTIGIDFKIKTVEINGK 66
Query: 60 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQD 119
++KL +WDTAGQERF T+T++YYRGA GIILVYDVT +TF N+ W K V ++ N +
Sbjct: 67 KIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANIRQ-WFKTVTEHA-NDE 124
Query: 120 CVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-V 178
+LVGNK D D+ RAVT E+G L++E F+E SAKN E+V + F L I E +
Sbjct: 125 AQLLLVGNKSDMDT-RAVTYEQGEELSKELGIPFIESSAKNDENVNEIFSTLAKLIQEKI 183
Query: 179 PSLLEQGSAVVKNQILKQKEVQESARGGNCC 209
S + K+ L S+ NCC
Sbjct: 184 DSNRLAANGTGKDSNLNINSGSGSSSKANCC 214
>gi|89027972|gb|ABD59352.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 126/209 (60%), Gaps = 11/209 (5%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N +DY FK+LLIGDS VGKS LL +S D TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD+T E+F N+ W E++ Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLSEIDRYANDSVC-KLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV-----PS 180
GNK D R V A+E FLE SAK + +V++ F + I + +
Sbjct: 120 GNKCDLAESRTVDTSVAQAYAEEIGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAA 179
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
L + S +V+ +K + +Q+ + CC
Sbjct: 180 LERKPSNIVQ---MKGQPIQQEQQKSRCC 205
>gi|389593257|ref|XP_003721882.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
gi|321438384|emb|CBZ12137.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
Length = 200
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 110/160 (68%), Gaps = 3/160 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ L + K +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYD T E+F N+ + W E+E Y++ ++ KILVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKT-WLSEIEKYAS-ENVNKILVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D +++AV + A FLE SAKN+ +V++ F
Sbjct: 123 CDLVTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAF 162
>gi|336367724|gb|EGN96068.1| hypothetical protein SERLA73DRAFT_141217 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380437|gb|EGO21590.1| hypothetical protein SERLADRAFT_396608 [Serpula lacrymans var.
lacrymans S7.9]
Length = 204
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 126/201 (62%), Gaps = 3/201 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +TFTN+ W +E++ Y++ + K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D S++ V A + FLE SAKN +V+Q F + +I + S
Sbjct: 124 SDLTSKKVVEYSVAKEFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPSGA 183
Query: 189 VKNQILKQKEVQESARGGNCC 209
K+ + + + ++ G+CC
Sbjct: 184 AKSSTVTPGQSVQQSQSGSCC 204
>gi|326427375|gb|EGD72945.1| GTP-binding protein yptV1 [Salpingoeca sp. ATCC 50818]
Length = 220
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 122/189 (64%), Gaps = 10/189 (5%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISN---SVHDPSPTIGVDFKIKLLTVGGKRLKLT 64
+SY Y FK ++IGDS VGKS +LL + +VHD TIGV+F +++T+ G ++KL
Sbjct: 2 SSYSYLFKYIIIGDSAVGKSCLLLQFTDHRFQTVHDL--TIGVEFGARMVTIDGHQIKLQ 59
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L + W ++ +S N + V IL
Sbjct: 60 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFQHLGT-WLEDARAHS-NPNMVIIL 117
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
VGNK D + +R V REEG A+E LF+E SAK +V+ F KI E L+Q
Sbjct: 118 VGNKADLEDKRQVPREEGERFARERGLLFIETSAKTAMNVEDAFTTTANKIYEK---LQQ 174
Query: 185 GSAVVKNQI 193
G +N++
Sbjct: 175 GVFDARNEL 183
>gi|221116035|ref|XP_002155975.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 202
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 124/207 (59%), Gaps = 10/207 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +ETF N+ W +E++ Y+ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQETFNNVKQ-WLQEIDRYAC-ESVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVPSLL 182
GNK D +++ V A FLE SAKN +V+Q F + +I + P
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPP--- 176
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
Q +A ++ + GG CC
Sbjct: 177 -QTTADRSEKVPLKSGSPVKPSGGGCC 202
>gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis]
Length = 203
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 112/167 (67%), Gaps = 3/167 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKMIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E+ Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEINRYAS-ENVNKLLVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
D + R V+ + G A FLE SAKN +V++ F + +I
Sbjct: 123 CDLTTRRVVSYQTGKDFADSLGIPFLETSAKNATNVEEAFMTMASEI 169
>gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus]
Length = 203
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 121/205 (59%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + K +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + RAV+ + A + F+E SAK+ +V+Q F + I + Q
Sbjct: 120 GNKCDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEQAFMGMSASIKN--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
SA Q Q CCS
Sbjct: 178 SANNGRPPTVQIRGQPVGPKSGCCS 202
>gi|18447915|dbj|BAB84323.1| ras-related protein RAB8-2 [Nicotiana tabacum]
gi|18447919|dbj|BAB84325.1| ras-related protein RAB8-4 [Nicotiana tabacum]
Length = 216
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 130/206 (63%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F +D+ ++ E S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLSESDSKTE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
A+ NQ + ++A+ +CC
Sbjct: 190 P-QAIRINQSDQAGTSGQAAQKSSCC 214
>gi|440633729|gb|ELR03648.1| hypothetical protein GMDG_06296 [Geomyces destructans 20631-21]
Length = 253
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 129/216 (59%), Gaps = 28/216 (12%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G+ +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 55 AGSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 113
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE ++T + K
Sbjct: 114 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAT-EGVNK 171
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
IL+GNK D D +R V+ E G LA E FLE SAK +V++ F L
Sbjct: 172 ILIGNKCDWDDKRTVSTERGQALADELGIPFLEVSAKANINVEKAFFSL----------- 220
Query: 183 EQGSAVVKNQILKQKEVQE---------SARGGNCC 209
+A +K +I+ + +E S+ GG CC
Sbjct: 221 ---AADIKRRIVDSAKTEESKGVDVAQGSSVGGKCC 253
>gi|219126122|ref|XP_002183313.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405069|gb|EEC45013.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 203
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + K +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEQDQKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQ-WLHEIDRYAA-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++R V+ E+G A FLE SAK + +V+Q F + +I
Sbjct: 120 GNKSDLTAKRVVSTEQGKEFADSLGIEFLETSAKTSSNVEQAFLTMASQI 169
>gi|299738319|ref|XP_001838277.2| Rab18 [Coprinopsis cinerea okayama7#130]
gi|298403253|gb|EAU83465.2| Rab18 [Coprinopsis cinerea okayama7#130]
Length = 223
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 114/175 (65%), Gaps = 8/175 (4%)
Query: 15 KILLIGDSGVGKSSILLSLISNSV---HDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
K+LLIG+S VGKSS+LL + S TIGVDF++ + V GK++KL+IWDTAGQ
Sbjct: 18 KLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMEVKGKKVKLSIWDTAGQ 77
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF T+TSSYYRGA GIILVYDV RETF L W E+E Y ++ VKILVGNK
Sbjct: 78 ERFRTITSSYYRGAQGIILVYDVANRETFEALPR-WYSELETY-VSESVVKILVGNK--- 132
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
+ R V EG AQ+ LF+E SAK VK+ F++L+ +IL+ P L + S
Sbjct: 133 EYSRQVPTAEGEKFAQKMNSLFVEASAKTAVGVKEVFQELVERILDTPELWDPKS 187
>gi|296471468|tpg|DAA13583.1| TPA: ras-related protein Rab-1B [Bos taurus]
Length = 197
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|146422886|ref|XP_001487377.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
gi|146388498|gb|EDK36656.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
Length = 207
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
NN YD+ FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDFLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ V A FLE SA ++ +V+Q F + +I
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|392596937|gb|EIW86259.1| rab-type small GTP-binding protein [Coniophora puteana RWD-64-598
SS2]
Length = 208
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 132/209 (63%), Gaps = 14/209 (6%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIWD 67
YD+ K+LLIGDSGVGKS +LL ++ PS TIG+DFKI+ + + GKR+KL IWD
Sbjct: 6 YDFLIKLLLIGDSGVGKSCLLLRFCDDA-WTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W +E +++ + KIL+GN
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFKNIRT-WHANIEQHAS-EGVNKILIGN 122
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKIL--EVPSL 181
K D +RAVT EEG LA E F+E SAK E V++ F +D+ +++ + S
Sbjct: 123 KSDWTDKRAVTEEEGRELANELGVKFMETSAKVNEGVEEAFFTLARDIKTRLIDSQADSA 182
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCCS 210
L G+ + + Q +A G+CCS
Sbjct: 183 LPSGAGNADSVKVNQP---AAASSGSCCS 208
>gi|321473003|gb|EFX83971.1| hypothetical protein DAPPUDRAFT_223052 [Daphnia pulex]
Length = 203
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 128/207 (61%), Gaps = 9/207 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYSESYISTIGVDFKIRTIDLDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +E+F N+ W +E++ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVPSLL 182
GNK D +++ V A++ FLE SAKN +V+Q F + +I + PS
Sbjct: 120 GNKCDLSTKKVVDYAAAKEYAEQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPPSAP 179
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
G + N + V++S G CC
Sbjct: 180 SDGVGGI-NINSSSRPVEQSKSG--CC 203
>gi|336381842|gb|EGO22993.1| hypothetical protein SERLADRAFT_471590 [Serpula lacrymans var.
lacrymans S7.9]
Length = 241
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 111/170 (65%), Gaps = 5/170 (2%)
Query: 15 KILLIGDSGVGKSSILLSLISN---SVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
K+LLIG++ VGKSS+LL + S TIGVDF++ + V G+++KL+IWDTAGQ
Sbjct: 20 KLLLIGNASVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEVNGRKVKLSIWDTAGQ 79
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF +TSSYYRGA GIILVYDV RE+F L W E+E Y + V+I+VGNKVD+
Sbjct: 80 ERFRGITSSYYRGAQGIILVYDVANRESFEALPK-WFSELETYVPDT-VVRIIVGNKVDK 137
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL 181
+ R V EG A LF+E SAK + V+ F+D++ +ILE P L
Sbjct: 138 EQSRQVPTSEGSAYAIRSGALFVEASAKTSVGVRSAFQDVVGRILETPEL 187
>gi|315040511|ref|XP_003169633.1| GTP-binding protein [Arthroderma gypseum CBS 118893]
gi|311346323|gb|EFR05526.1| GTP-binding protein [Arthroderma gypseum CBS 118893]
Length = 206
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 130/210 (61%), Gaps = 10/210 (4%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTINLDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYR A GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVP 179
IL+GNK D + +RAVT E+G LA E FLE SAKN +V + F L +I ++V
Sbjct: 119 ILIGNKCDGEEKRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDMDVF 178
Query: 180 SLLEQGSAVVKNQILKQKEVQESARGGNCC 209
+ GS V I Q S+ G +CC
Sbjct: 179 KAEQAGSQGV--NIDNQNGGAGSSLGKSCC 206
>gi|307213108|gb|EFN88630.1| Ras-related protein Rab-10 [Harpegnathos saltator]
Length = 200
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 117/174 (67%), Gaps = 3/174 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL + TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDEAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
++GNK D + +R V+ E+G +A+EH F+E SAK ++ Q F +L IL+
Sbjct: 119 ILGNKSDMEDKRVVSTEKGEAIAREHGIRFMETSAKANINIDQAFSELAEAILD 172
>gi|224100931|ref|XP_002312073.1| predicted protein [Populus trichocarpa]
gi|118486181|gb|ABK94933.1| unknown [Populus trichocarpa]
gi|222851893|gb|EEE89440.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 128/212 (60%), Gaps = 21/212 (9%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F +D+ +I E S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRISETDSRAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGN------CC 209
Q +K + SA GG CC
Sbjct: 190 P-------QTIKINQPDPSASGGQAAQKSACC 214
>gi|443693080|gb|ELT94523.1| hypothetical protein CAPTEDRAFT_177262 [Capitella teleta]
Length = 206
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 126/205 (61%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + K +KL I
Sbjct: 6 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDRKTIKLQI 65
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ + K+LV
Sbjct: 66 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ESVNKLLV 123
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL-EVPSLLEQ 184
GNK D +++ V A + FLE SAKN +V+Q F + +I + +
Sbjct: 124 GNKCDLTTKKVVDYTTAKEYADQLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPVAAA 183
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G + +I V++ GG CC
Sbjct: 184 GDSKPNVKINASTPVKQG--GGGCC 206
>gi|66518279|ref|XP_393723.2| PREDICTED: ras-related protein Rab-10 isoform 2 [Apis mellifera]
gi|380028841|ref|XP_003698094.1| PREDICTED: ras-related protein Rab-10-like [Apis florea]
Length = 200
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 117/174 (67%), Gaps = 3/174 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
++GNK D + +R V+ E G +A+EH F+E SAK ++ + F +L ILE
Sbjct: 119 ILGNKSDMEDKRVVSTERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILE 172
>gi|158291520|ref|XP_313029.4| AGAP004146-PA [Anopheles gambiae str. PEST]
gi|157017587|gb|EAA08609.4| AGAP004146-PA [Anopheles gambiae str. PEST]
Length = 201
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 129/204 (63%), Gaps = 11/204 (5%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYD T ++F N+ W +E+E Y+ + + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDCTDHDSFENVKQ-WLEEIERYACD-NVNKLLVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVPSLLEQG 185
D +++ V M LA + FLE SAKN +V+Q F + +I + PS
Sbjct: 123 CDLQTKKRVDTTTAMELANQLGIPFLETSAKNATNVEQAFMTMAAEIKNRVGPPSSAADP 182
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+ VK I K + V+ A+ G CC
Sbjct: 183 PSAVK--IDKGRNVE--AKSG-CC 201
>gi|343172836|gb|AEL99121.1| Ras-like protein, partial [Silene latifolia]
Length = 196
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 107/163 (65%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YDY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + + GK +K
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELEGKSVKYRF 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E+ Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEINRYANDSVC-KLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D R V + G LA E FLE SAK+ +V++ F
Sbjct: 120 GNKCDLVENRVVDTQMGQALADELGIPFLETSAKDAVNVEKAF 162
>gi|258577751|ref|XP_002543057.1| GTP-binding protein SAS1 [Uncinocarpus reesii 1704]
gi|237903323|gb|EEP77724.1| GTP-binding protein SAS1 [Uncinocarpus reesii 1704]
Length = 205
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 126/207 (60%), Gaps = 5/207 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSF-TPSFITTIGIDFKIRTIELEGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
+L+GNK D + +RAV+ E+G LA E FLE SAKN +V + F L +I +V
Sbjct: 119 MLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVDKAFYTLASEIKKVMDTS 178
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
+ + N + Q + CC
Sbjct: 179 KAEQSASHNVSIDQGSGSGAGLANKCC 205
>gi|194741692|ref|XP_001953321.1| GF17263 [Drosophila ananassae]
gi|190626380|gb|EDV41904.1| GF17263 [Drosophila ananassae]
Length = 205
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 128/207 (61%), Gaps = 10/207 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +E+F N+ W +E+E Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVPSLL 182
GNK D +++ V A + FLE SAK+ +V+Q F + +I + PS
Sbjct: 123 GNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSA 182
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
++ VK + Q E+ R G CC
Sbjct: 183 TDNASKVK---IDQGRPVENTRSG-CC 205
>gi|406606883|emb|CCH41737.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 205
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 110/163 (67%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NTEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTADYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D +++V A FLE SA N+ +V+Q F
Sbjct: 120 GNKSDLTDKKSVDYNVAKEFADALDIPFLETSALNSTNVEQAF 162
>gi|348538473|ref|XP_003456715.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 203
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 126/206 (61%), Gaps = 7/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLE 183
GNK D +++ V A FLE SAKN +V+Q F + +I + P
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATA 179
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
G ++ V+ S+ G CC
Sbjct: 180 GGGEKPNVKLTPGTTVKTSS--GGCC 203
>gi|355714863|gb|AES05142.1| RAB1B, member RAS oncoprotein family [Mustela putorius furo]
Length = 210
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 12 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 71
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 72 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 129
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 130 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 179
>gi|442759119|gb|JAA71718.1| Putative gtp-binding protein [Ixodes ricinus]
Length = 207
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 118/171 (69%), Gaps = 5/171 (2%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIW 66
SYD+ FK+LLIGDSGVGK+SIL S++ D S TIG+DFKI+++ + GK++KL IW
Sbjct: 4 SYDFLFKLLLIGDSGVGKTSILFRF-SDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQIW 62
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+T++YYRGA GI+LVYDVT+ TF N+ + W + + ++ D K+++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTKENTFENIKT-WIRNTDEHAA-ADVEKMILG 120
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
NK D + R V+RE G LA EH F+E SA ++ +V+ F L I E
Sbjct: 121 NKCDMNDLRQVSRERGEKLAVEHGIKFMETSAVSSINVEDAFYTLARDIKE 171
>gi|432901784|ref|XP_004076945.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|321478009|gb|EFX88967.1| hypothetical protein DAPPUDRAFT_304738 [Daphnia pulex]
Length = 212
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAREIYE 169
>gi|14318480|ref|NP_116615.1| Ypt1p [Saccharomyces cerevisiae S288c]
gi|1176710|sp|P01123.2|YPT1_YEAST RecName: Full=GTP-binding protein YPT1; AltName: Full=Protein YP2;
AltName: Full=Rab GTPase YPT1; AltName: Full=Transport
GTPase YPT1
gi|55670317|pdb|1UKV|Y Chain Y, Structure Of Rabgdp-Dissociation Inhibitor In Complex With
Prenylated Ypt1 Gtpase
gi|193885330|pdb|3CUE|F Chain F, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885336|pdb|3CUE|L Chain L, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885342|pdb|3CUE|R Chain R, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885348|pdb|3CUE|X Chain X, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|836716|dbj|BAA09201.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae]
gi|45270824|gb|AAS56793.1| YFL038C [Saccharomyces cerevisiae]
gi|151940725|gb|EDN59112.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190406537|gb|EDV09804.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae RM11-1a]
gi|207345743|gb|EDZ72464.1| YFL038Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256268891|gb|EEU04240.1| Ypt1p [Saccharomyces cerevisiae JAY291]
gi|259146151|emb|CAY79410.1| Ypt1p [Saccharomyces cerevisiae EC1118]
gi|285811857|tpg|DAA12402.1| TPA: Ypt1p [Saccharomyces cerevisiae S288c]
gi|323305139|gb|EGA58888.1| Ypt1p [Saccharomyces cerevisiae FostersB]
gi|323309292|gb|EGA62512.1| Ypt1p [Saccharomyces cerevisiae FostersO]
gi|323333703|gb|EGA75095.1| Ypt1p [Saccharomyces cerevisiae AWRI796]
gi|323348826|gb|EGA83065.1| Ypt1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355229|gb|EGA87055.1| Ypt1p [Saccharomyces cerevisiae VL3]
gi|349577879|dbj|GAA23046.1| K7_Ypt1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365760958|gb|EHN02639.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|365765905|gb|EHN07409.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299633|gb|EIW10726.1| Ypt1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|401625946|gb|EJS43923.1| ypt1p [Saccharomyces arboricola H-6]
gi|401840682|gb|EJT43405.1| YPT1-like protein [Saccharomyces kudriavzevii IFO 1802]
gi|1589358|prf||2210408C GTP-binding protein
Length = 206
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 132/214 (61%), Gaps = 20/214 (9%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIG+SGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRG+HGII+VYDVT +E+F N +W +E++ Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATST-VLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL--- 182
GNK D +R V + A +K FLE SA ++ +V+ F + +I E S
Sbjct: 120 GNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLN 179
Query: 183 -------EQGSAVVKNQILKQKEVQESARGGNCC 209
++G+ +K Q L + GG CC
Sbjct: 180 ETTQKKEDKGNVNLKGQSL-------TNTGGGCC 206
>gi|255631584|gb|ACU16159.1| unknown [Glycine max]
Length = 202
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 124/205 (60%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY K+LLIGDSGV KS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLLKLLLIGDSGVRKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ RAV+ E A F+E SAK +V+Q F + I + + Q
Sbjct: 120 GNKCDLEANRAVSYEAAKAFADGIGIPFMETSAKGATNVEQAFMAMTASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+ + + Q Q A+ G CCS
Sbjct: 178 ANNARPPTV-QIRGQPVAQKGGCCS 201
>gi|336369061|gb|EGN97403.1| hypothetical protein SERLA73DRAFT_184094 [Serpula lacrymans var.
lacrymans S7.3]
Length = 235
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 111/170 (65%), Gaps = 5/170 (2%)
Query: 15 KILLIGDSGVGKSSILLSLISN---SVHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQ 71
K+LLIG++ VGKSS+LL + S TIGVDF++ + V G+++KL+IWDTAGQ
Sbjct: 20 KLLLIGNASVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEVNGRKVKLSIWDTAGQ 79
Query: 72 ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDR 131
ERF +TSSYYRGA GIILVYDV RE+F L W E+E Y + V+I+VGNKVD+
Sbjct: 80 ERFRGITSSYYRGAQGIILVYDVANRESFEALPK-WFSELETYVPDT-VVRIIVGNKVDK 137
Query: 132 DSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL 181
+ R V EG A LF+E SAK + V+ F+D++ +ILE P L
Sbjct: 138 EQSRQVPTSEGSAYAIRSGALFVEASAKTSVGVRSAFQDVVGRILETPEL 187
>gi|225713410|gb|ACO12551.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|225714426|gb|ACO13059.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462177|gb|ADD24136.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462929|gb|ADD24512.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290463011|gb|ADD24553.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561479|gb|ADD38140.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561689|gb|ADD38244.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +++F NL W +E++ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQ-WLQEIDRYAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A + FLE SAKN +V+Q F + +I
Sbjct: 120 GNKCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAEI 169
>gi|91087587|ref|XP_971919.1| PREDICTED: similar to Rab-protein 2 CG3269-PA [Tribolium castaneum]
gi|270010699|gb|EFA07147.1| hypothetical protein TcasGA2_TC010138 [Tribolium castaneum]
Length = 213
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 116/172 (67%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L++ W + +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLDDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYE 169
>gi|119182590|ref|XP_001242423.1| GTP-binding protein ypt1 [Coccidioides immitis RS]
gi|303319289|ref|XP_003069644.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109330|gb|EER27499.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040923|gb|EFW22856.1| GTP-binding protein ypt1 [Coccidioides posadasii str. Silveira]
gi|392865315|gb|EAS31095.2| GTP-binding protein ypt1 [Coccidioides immitis RS]
Length = 201
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 119/187 (63%), Gaps = 8/187 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + ++AV A FLE SAKN +V+Q F + +I E G
Sbjct: 120 GNKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE-----RMG 174
Query: 186 SAVVKNQ 192
+A V N+
Sbjct: 175 TATVNNK 181
>gi|1370168|emb|CAA98161.1| RAB1D [Lotus japonicus]
Length = 203
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 122/205 (59%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + K +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFGDDSYIESYISTIGVDFKIRTVEQDAKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + RAV+ + A + F+E SAK+ +V+Q F + I + Q
Sbjct: 120 GNKCDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEQAFMAMSASIKN--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
SA Q Q + CCS
Sbjct: 178 SANNGRPPTVQIRGQPVGQKSGCCS 202
>gi|449431874|ref|XP_004133725.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 204
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 123/201 (61%), Gaps = 6/201 (2%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 9 DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 68
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ + C K+LVGNK
Sbjct: 69 GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGNKC 126
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D + V + A E FLE SAK++ +V+Q F + +I + S
Sbjct: 127 DLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKKMGSQPTSSKSS 186
Query: 190 KNQILKQKEVQESARGGNCCS 210
N +K + +Q+ + +CCS
Sbjct: 187 GNVQMKGQPIQQKS---SCCS 204
>gi|255570958|ref|XP_002526430.1| protein with unknown function [Ricinus communis]
gi|223534210|gb|EEF35925.1| protein with unknown function [Ricinus communis]
Length = 202
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 125/207 (60%), Gaps = 17/207 (8%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ + C K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLEQ 184
D + V + A E FLE SAK++ +V+Q F ++ K+ P+ +
Sbjct: 123 CDLIENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKRKMGNQPTANKS 182
Query: 185 --GSAVVKNQILKQKEVQESARGGNCC 209
G+ +K Q ++QK NCC
Sbjct: 183 TGGTVQMKGQPIQQKN--------NCC 201
>gi|89027974|gb|ABD59353.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 126/209 (60%), Gaps = 11/209 (5%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N +DY FK+LLIGDS VGKS LL +S D TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD+T E+F N + W E++ Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNN-AKQWLSEIDRYANDSVC-KLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV-----PS 180
GNK D R V A+E FLE SAK + +V++ F + I + +
Sbjct: 120 GNKCDLAESRTVDTSVAQAYAEEIGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAA 179
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCC 209
L + S +V+ +K + +Q+ + CC
Sbjct: 180 LERKPSNIVQ---MKGQPIQQEQQKSRCC 205
>gi|71019499|ref|XP_759980.1| GTP-binding protein Ypt1 [Ustilago maydis 521]
gi|46099486|gb|EAK84719.1| YPT1_NEUCR GTP-binding protein ypt1 [Ustilago maydis 521]
Length = 208
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 130/209 (62%), Gaps = 17/209 (8%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 67
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +TF+N+ W +E++ Y+ + K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQ-WLQEIDRYAC-EGVNKLLVGNK 125
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D +++ V A + + FLE SAK+ +V+Q F + +I + GS+
Sbjct: 126 SDLTNKKVVEYATAKDFADQLQIPFLETSAKSATNVEQAFLTMAKQIKD-----RMGSST 180
Query: 189 VKNQ--------ILKQKEVQESARGGNCC 209
V NQ + + + V + + GG CC
Sbjct: 181 VNNQAGGKSTLKVGQGQNVSQQSNGG-CC 208
>gi|392596085|gb|EIW85408.1| GTP-binding protein ypt1 [Coniophora puteana RWD-64-598 SS2]
Length = 203
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 125/202 (61%), Gaps = 6/202 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +TF+N+ W +E++ Y++ + K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQ-WLQEIDRYAS-EGVNKLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQGSA 187
D S++ V A + FLE SAKN +V+Q F + +I + + S
Sbjct: 124 SDLTSKKVVEYSVAKEFADQLTIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPAGG 183
Query: 188 VVKNQILKQKEVQESARGGNCC 209
I + VQ+ + G CC
Sbjct: 184 AKSTTITPGQSVQQQSSG--CC 203
>gi|383848303|ref|XP_003699791.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Megachile
rotundata]
Length = 200
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 116/174 (66%), Gaps = 3/174 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
++GNK D + R V+ E G +A+EH F+E SAK ++ + F +L ILE
Sbjct: 119 ILGNKSDMEDRRVVSTERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILE 172
>gi|225449603|ref|XP_002284071.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|296086273|emb|CBI31714.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 21/212 (9%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKVLVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F KD+ ++ E S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAETDSKAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGN------CC 209
Q +K + ++A GG CC
Sbjct: 190 P-------QTIKINQPDQAANGGQAPQKSACC 214
>gi|328871755|gb|EGG20125.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 125/187 (66%), Gaps = 11/187 (5%)
Query: 2 GSKVGNNS--YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVG 57
G+ N S YDY K+LLIGDSGVGKS +LL +S PS TIG+DFKI+ + +
Sbjct: 5 GTTASNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFT-PSFITTIGIDFKIRTIELE 63
Query: 58 GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTN 117
GKR+KL IWDTAGQERF T+T++YYRGA GI+LVYDVT ++F N+ + W + +E ++T
Sbjct: 64 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHAT- 121
Query: 118 QDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLY 173
+ K+L+GNK D ++ V G LA E+ FLE SAKN+ +V++ F KD+
Sbjct: 122 ESVNKMLIGNKCDLPEKKVVDSSRGKALADEYGIKFLETSAKNSINVEEAFISLAKDIKK 181
Query: 174 KILEVPS 180
++++ P+
Sbjct: 182 RMIDTPN 188
>gi|322802264|gb|EFZ22660.1| hypothetical protein SINV_03565 [Solenopsis invicta]
Length = 200
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 129/206 (62%), Gaps = 7/206 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++GNK D + R V+ E+G +A+EH F+E SAK ++ + F +L IL+ E
Sbjct: 119 ILGNKSDMEERRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTHGKE 178
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
A +++ + V+ S+ CC
Sbjct: 179 PQDA--PDRVTVDRRVERSS--NRCC 200
>gi|308160644|gb|EFO63119.1| Rab1a [Giardia lamblia P15]
Length = 212
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 136/211 (64%), Gaps = 13/211 (6%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIW 66
+++Y FK+L+IGDSGVGKS++LL L + + + S TIGVDFK+K L + +KL IW
Sbjct: 5 NHEYLFKLLVIGDSGVGKSALLLRL-CDKIFNASYITTIGVDFKVKSLNIKDNTVKLQIW 63
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQE+F T+TS+YYRGAHGI++VYDVT RE+F N+ + W KE+ + + + VK ++G
Sbjct: 64 DTAGQEKFRTITSTYYRGAHGIMVVYDVTSRESFDNVKT-WLKEIA-NNASDNVVKYIIG 121
Query: 127 NKVD-RDSERA-----VTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K D RD+ + V+ EEG A+E F+E S+K+ E+V+Q F DL +I+E
Sbjct: 122 SKKDLRDNAGSINASHVSTEEGRKFAEELGISFIETSSKSGENVEQAFVDLAVRIIETQG 181
Query: 181 LLEQGSAVVKNQILKQKEVQESAR--GGNCC 209
QG V N + ++A+ G CC
Sbjct: 182 TTAQGGGRVMNNPVVVSLSDQTAKKDGKGCC 212
>gi|351714035|gb|EHB16954.1| Ras-related protein Rab-1A, partial [Heterocephalus glaber]
Length = 198
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 127/201 (63%), Gaps = 6/201 (2%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 2 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 61
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LVGNK
Sbjct: 62 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 119
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQGSAV 188
D +++ V A FLE SAKN +V+Q F + +I + + G A
Sbjct: 120 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 179
Query: 189 VKNQILKQKEVQESARGGNCC 209
N ++ V++S GG CC
Sbjct: 180 KSNVKIQSTPVKQS--GGGCC 198
>gi|196011940|ref|XP_002115833.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190581609|gb|EDV21685.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 210
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 113/163 (69%), Gaps = 7/163 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D +S R V +EEG A+EH +F+E SAK +V++ F
Sbjct: 118 GNKSDLESRRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAF 160
>gi|149062039|gb|EDM12462.1| rCG48149, isoform CRA_d [Rattus norvegicus]
Length = 193
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI 169
>gi|348522973|ref|XP_003448998.1| PREDICTED: ras-related protein Rab-1A-like [Oreochromis niloticus]
Length = 212
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 113/163 (69%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+ ++ ++LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQ-WLDEIDRYAC-ENVSRLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D S++ V LA K FLE SAK++++V++ F
Sbjct: 120 GNKSDLVSKKVVDAATAQDLASSLKIPFLETSAKSSDNVERAF 162
>gi|147775956|emb|CAN69084.1| hypothetical protein VITISV_028171 [Vitis vinifera]
Length = 721
Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats.
Identities = 84/141 (59%), Positives = 94/141 (66%), Gaps = 26/141 (18%)
Query: 46 GVDFKIKLLTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSS 105
GVDFKI LLT+GGKRLKLTIWDTAGQERFGTLT+SYYRGAHGIILV
Sbjct: 9 GVDFKIMLLTIGGKRLKLTIWDTAGQERFGTLTNSYYRGAHGIILVV------------W 56
Query: 106 VWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVK 165
+WA V QDC ERAVTREEGM LAQEHKC FLECSAK E+V+
Sbjct: 57 IWASNVYQTDAIQDC-------------ERAVTREEGMSLAQEHKCSFLECSAKTRENVQ 103
Query: 166 QCFKDLLYKILEVPSLLEQGS 186
QCFK+L K + P ++QG+
Sbjct: 104 QCFKELTLKAIASPG-VKQGA 123
>gi|326921616|ref|XP_003207053.1| PREDICTED: putative Rab-43-like protein ENSP00000330714-like
[Meleagris gallopavo]
Length = 332
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/141 (55%), Positives = 102/141 (72%), Gaps = 2/141 (1%)
Query: 46 GVDFKIKLLTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSS 105
GVDFK+K ++V G + KL IWDTAGQERF TLT SYYRGA G+ILVYDVTRR+TF L +
Sbjct: 168 GVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN 227
Query: 106 VWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVK 165
W E+E Y T D VK+LVGNK+D+++ R V R EG+ A++H LF+E SAK + V+
Sbjct: 228 -WLNELETYCTRNDIVKMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQ 285
Query: 166 QCFKDLLYKILEVPSLLEQGS 186
F++L+ KI++ P L E S
Sbjct: 286 CAFEELVEKIIQTPGLWESES 306
>gi|158341664|ref|NP_001103449.1| ras-related protein Rab-1B [Rattus norvegicus]
gi|293332049|ref|NP_001168820.1| uncharacterized protein LOC100382625 [Zea mays]
gi|392343176|ref|XP_002727643.2| PREDICTED: ras-related protein Rab-1B-like [Rattus norvegicus]
gi|149042337|gb|EDL96044.1| rCG63295 [Rattus norvegicus]
gi|149062037|gb|EDM12460.1| rCG48149, isoform CRA_b [Rattus norvegicus]
gi|223973195|gb|ACN30785.1| unknown [Zea mays]
Length = 201
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTM---AAEIKKRMGPG 176
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+A + LK + G CC
Sbjct: 177 AASGGERPNLKIDSTPVKSASGGCC 201
>gi|240849285|ref|NP_001155334.1| ras-related protein Rab-1A [Ovis aries]
gi|238566736|gb|ACR46625.1| RAB1A [Ovis aries]
Length = 204
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
>gi|444515602|gb|ELV10933.1| Ras-related protein Rab-1A [Tupaia chinensis]
Length = 205
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 127/201 (63%), Gaps = 6/201 (2%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LVGNK
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 126
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQGSAV 188
D +++ V A FLE SAKN +V+Q F + +I + + G A
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 186
Query: 189 VKNQILKQKEVQESARGGNCC 209
N ++ V++S GG CC
Sbjct: 187 KSNVKIQSTPVKQS--GGGCC 205
>gi|356983948|gb|AET43936.1| Ras-related protein Rab-1A, partial [Reishia clavigera]
Length = 195
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V + FLE SAKN +V+Q F + +I
Sbjct: 123 GNKCDLTTKKVVDYTTAKEYTDQLGIPFLETSAKNATNVEQAFMTMAAEI 172
>gi|221220558|gb|ACM08940.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 129/206 (62%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLE 183
GNK D +++ V A FLE SAK+ +V+Q F + +I + P
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADNLGIPFLEASAKSATNVEQAFMTMAAEIKKRMGPGATA 179
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
GS K+ + Q +++ GG CC
Sbjct: 180 GGSE--KSNVKIQSTPVKTSSGG-CC 202
>gi|347964252|ref|XP_311197.3| AGAP000671-PA [Anopheles gambiae str. PEST]
gi|333467445|gb|EAA06827.3| AGAP000671-PA [Anopheles gambiae str. PEST]
Length = 204
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 118/174 (67%), Gaps = 3/174 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
++GNK D +RAV +E G +A+EH F+E SAK +++ F++L IL+
Sbjct: 119 ILGNKCDMADKRAVRKERGENIAREHDIRFMETSAKANTNIELAFRELAEAILD 172
>gi|322803217|gb|EFZ23238.1| hypothetical protein SINV_08216 [Solenopsis invicta]
Length = 224
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 113/174 (64%), Gaps = 3/174 (1%)
Query: 14 FKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDTAGQE 72
KIL+IG+S VGKSSILL + ++ T+G+D+K K + + G +KL IWDTAGQE
Sbjct: 12 LKILMIGESNVGKSSILLRFTEDEFYENMQSTVGMDYKTKQVNIDGNVVKLAIWDTAGQE 71
Query: 73 RFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRD 132
RF TLT SYYR G IL+YDVT R TF L + W E+ Y D VK++VGNK+D
Sbjct: 72 RFRTLTPSYYRDGQGAILMYDVTDRNTFVKLET-WLNELNTYCNKTDIVKMVVGNKIDL- 129
Query: 133 SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
R V+ E+G+ A+ H+ L++E SAK + V+ CF++L+ KI++ P L + S
Sbjct: 130 PNREVSTEDGLQFARRHQTLYIESSAKTADGVRCCFEELVQKIIQTPGLWDTHS 183
>gi|367011395|ref|XP_003680198.1| hypothetical protein TDEL_0C00980 [Torulaspora delbrueckii]
gi|359747857|emb|CCE90987.1| hypothetical protein TDEL_0C00980 [Torulaspora delbrueckii]
Length = 215
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 115/171 (67%), Gaps = 6/171 (3%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIW 66
SYD KILLIGDSGVGKS +L+ + + + PS TIG+DFKIK + + GK+ KL +W
Sbjct: 16 SYDSIMKILLIGDSGVGKSCLLVRFVDDKFN-PSFITTIGIDFKIKTVDINGKKTKLQLW 74
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+T++YYRGA GIILVYDVT TFTN+ W K V ++ N D +LVG
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIRQ-WFKTVNEHA-NDDAQLLLVG 132
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
NK D D+ R VT E+G LA+E F+E SAKN ++V + F L I E
Sbjct: 133 NKSDMDT-RTVTYEQGETLAKELGIPFVESSAKNDDNVNEIFFTLARLIQE 182
>gi|327292479|ref|XP_003230938.1| GTP-binding protein [Trichophyton rubrum CBS 118892]
gi|326466875|gb|EGD92328.1| GTP-binding protein [Trichophyton rubrum CBS 118892]
gi|326481140|gb|EGE05150.1| GTP-binding protein [Trichophyton equinum CBS 127.97]
Length = 206
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 129/210 (61%), Gaps = 10/210 (4%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTINLDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYR A GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVP 179
IL+GNK D + +RAVT E+G LA E FLE SAKN +V + F L +I ++V
Sbjct: 119 ILIGNKCDGEEKRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDMDVS 178
Query: 180 SLLEQGSAVVKNQILKQKEVQESARGGNCC 209
+ GS V I Q + G +CC
Sbjct: 179 KAEQAGSQGV--NIDNQNGGAGGSLGKSCC 206
>gi|241999568|ref|XP_002434427.1| RAS-related protein, putative [Ixodes scapularis]
gi|215497757|gb|EEC07251.1| RAS-related protein, putative [Ixodes scapularis]
gi|442750147|gb|JAA67233.1| Putative gtpase rab2 small g protein superfamily [Ixodes ricinus]
Length = 212
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYE 169
>gi|88193099|pdb|2FOL|A Chain A, Crystal Structure Of Human Rab1a In Complex With Gdp
Length = 191
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 115/171 (67%), Gaps = 3/171 (1%)
Query: 6 GNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLT 64
G+ YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL
Sbjct: 18 GSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 77
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+L
Sbjct: 78 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLL 135
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
VGNK D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 136 VGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 186
>gi|254583598|ref|XP_002497367.1| ZYRO0F03872p [Zygosaccharomyces rouxii]
gi|238940260|emb|CAR28434.1| ZYRO0F03872p [Zygosaccharomyces rouxii]
Length = 217
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 116/171 (67%), Gaps = 6/171 (3%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIW 66
SYD KILLIGDSGVGKS +L+ + + + PS TIG+DFKIK + + GK++KL +W
Sbjct: 16 SYDSIMKILLIGDSGVGKSCLLVRFVDDKFN-PSFITTIGIDFKIKTVDINGKKIKLQLW 74
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+T++YYRGA GIILVYDVT TF+N+ W K V ++ N D +LVG
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIRQ-WFKTVNEHA-NDDAQLLLVG 132
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
NK D D+ R VT E+G LA+E F+E SAKN ++V + F L I E
Sbjct: 133 NKSDMDT-RTVTYEQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182
>gi|121543895|gb|ABM55612.1| putative RAB1 [Maconellicoccus hirsutus]
Length = 203
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 112/170 (65%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVDLDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T E+F NL W +EV+ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDCTDLESFNNLKQ-WLEEVDRYAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A + FLE SAKN +V+Q F + +I
Sbjct: 120 GNKCDEVTKKVVDYTTAKEYADQLNIPFLETSAKNATNVEQAFMTMASEI 169
>gi|260781612|ref|XP_002585899.1| hypothetical protein BRAFLDRAFT_62895 [Branchiostoma floridae]
gi|260812193|ref|XP_002600805.1| hypothetical protein BRAFLDRAFT_95095 [Branchiostoma floridae]
gi|229270964|gb|EEN41910.1| hypothetical protein BRAFLDRAFT_62895 [Branchiostoma floridae]
gi|229286095|gb|EEN56817.1| hypothetical protein BRAFLDRAFT_95095 [Branchiostoma floridae]
Length = 206
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 109/164 (66%), Gaps = 5/164 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIWD 67
Y + FKI+LIG++GVGK+ L+ + + P TIGVDF IK + V G ++KL IWD
Sbjct: 4 YKFLFKIVLIGNAGVGKTC-LVRRFTQGLFPPGQGATIGVDFMIKTVDVDGDKVKLQIWD 62
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF ++T SYYR AH +ILVYDVT RE+F L W KE+E Y+ NQ + +LVGN
Sbjct: 63 TAGQERFRSITQSYYRSAHALILVYDVTSRESFDCLPE-WLKEIEQYA-NQQVITVLVGN 120
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDL 171
K+D S+R V E G+ AQ + FLE SAK E+V+ F DL
Sbjct: 121 KIDLTSQREVPPETGLQFAQANNMAFLEASAKEAENVETVFMDL 164
>gi|431912641|gb|ELK14659.1| Ras-related protein Rab-1A, partial [Pteropus alecto]
Length = 197
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 127/201 (63%), Gaps = 6/201 (2%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 118
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQGSAV 188
D +++ V A FLE SAKN +V+Q F + +I + + G A
Sbjct: 119 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 178
Query: 189 VKNQILKQKEVQESARGGNCC 209
N ++ V++S GG CC
Sbjct: 179 KSNVKIQSTPVKQS--GGGCC 197
>gi|440638868|gb|ELR08787.1| GTP-binding protein ypt1 [Geomyces destructans 20631-21]
Length = 201
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 124/208 (59%), Gaps = 13/208 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V A FLE SAKN +V+Q F + +I E G
Sbjct: 120 GNKSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE-----RMG 174
Query: 186 SAVVKN----QILKQKEVQESARGGNCC 209
+ N Q+ + VQ + GG CC
Sbjct: 175 TTTANNKPTVQVTGGQGVQSGSAGG-CC 201
>gi|392875748|gb|AFM86706.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 128/206 (62%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N Y Y FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYGYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLE 183
GNK D +++ V A FLE SAKN +V+Q F + +I + P
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATS 182
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
GS K+ + Q +S+ GG CC
Sbjct: 183 GGSE--KSNVNIQSTPVKSSSGG-CC 205
>gi|148298847|ref|NP_001091822.1| small GTP-binding protein Rab10 [Bombyx mori]
gi|111608111|gb|ABH10799.1| small GTP-binding protein Rab10 [Bombyx mori]
Length = 203
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 129/207 (62%), Gaps = 5/207 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL N TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T +TF ++ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++GNK D + +R V++E G +A+EH F+E SAK ++ + F +L IL+ + E
Sbjct: 119 ILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTAGRE 178
Query: 184 QGSAVVKNQILKQKEVQESARGGNCCS 210
+ + + ++ +R CC+
Sbjct: 179 ADADHSRIAVERRPSRAPPSRA--CCT 203
>gi|218195930|gb|EEC78357.1| hypothetical protein OsI_18114 [Oryza sativa Indica Group]
gi|222629897|gb|EEE62029.1| hypothetical protein OsJ_16811 [Oryza sativa Japonica Group]
Length = 206
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 108/160 (67%), Gaps = 3/160 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYIDTYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ C K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQ-WLSEIDRYASDSVC-KLLVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D + V EE A+ FLE SAK + +V++ F
Sbjct: 123 CDLVDSKVVDTEEAKAFAESLGISFLETSAKESINVEEAF 162
>gi|296817263|ref|XP_002848968.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|327301503|ref|XP_003235444.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|238839421|gb|EEQ29083.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|326462796|gb|EGD88249.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|326468927|gb|EGD92936.1| GTP-binding protein ypt1 [Trichophyton tonsurans CBS 112818]
gi|326480093|gb|EGE04103.1| Ras family protein [Trichophyton equinum CBS 127.97]
Length = 201
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 126/204 (61%), Gaps = 11/204 (5%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T Q K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-QGVNKLLVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D + ++ V A FLE SAKN +V+Q F + +I E G+A
Sbjct: 123 SDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE-----RMGTAT 177
Query: 189 VKNQ---ILKQKEVQESARGGNCC 209
V N+ + Q + +S G +CC
Sbjct: 178 VNNKPTVQVGQGQGVQSNSGSSCC 201
>gi|417408724|gb|JAA50900.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 15 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 74
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 75 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 132
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 133 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 182
>gi|2808638|emb|CAA04701.1| small GTP-binding protein [Daucus carota]
Length = 216
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 128/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEMDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F KD+ ++ E S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFEASAKTNMNVEEVFFSIAKDIKQRLAETDSKTE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + NQ + +++ CC
Sbjct: 190 PQTIKI-NQQEQGAGTSAASQKSACC 214
>gi|21313162|ref|NP_083852.1| ras-related protein Rab-1B [Mus musculus]
gi|354494718|ref|XP_003509482.1| PREDICTED: ras-related protein Rab-1B-like [Cricetulus griseus]
gi|46577116|sp|Q9D1G1.1|RAB1B_MOUSE RecName: Full=Ras-related protein Rab-1B
gi|12834379|dbj|BAB22888.1| unnamed protein product [Mus musculus]
gi|16741106|gb|AAH16408.1| RAB1B, member RAS oncogene family [Mus musculus]
gi|74140247|dbj|BAE33821.1| unnamed protein product [Mus musculus]
gi|112292937|dbj|BAF02846.1| Rab1B [Mus musculus]
gi|148701158|gb|EDL33105.1| RAB1B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|344243245|gb|EGV99348.1| Ras-related protein Rab-1B [Cricetulus griseus]
Length = 201
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI 169
>gi|254570669|ref|XP_002492444.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032242|emb|CAY70249.1| hypothetical protein PAS_chr3_1167 [Komagataella pastoris GS115]
gi|328353543|emb|CCA39941.1| Ras-related protein Rab-1A [Komagataella pastoris CBS 7435]
Length = 203
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 127/204 (62%), Gaps = 3/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N++ W +E++ Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVNQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V A + +E SA ++ +V+Q F ++ +I + G
Sbjct: 120 GNKSDLKDKKVVDYTVAKEFADALEIPLIETSALDSTNVEQAFFNMARQIKSQMVNNQAG 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
S K I + + ++ +CC
Sbjct: 180 SGTEKASINLRGQSVGGSQNSSCC 203
>gi|349484|gb|AAA18826.1| GTP-binding protein homologue [Leishmania major]
Length = 200
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 110/160 (68%), Gaps = 3/160 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGD+GVGKS +LL +S D TIGVDFKI+ L + K +KL IWDT
Sbjct: 5 YDYLFKLLLIGDTGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYD T E+F N+ + W E+E Y++ ++ KILVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKT-WLSEIEKYAS-ENVNKILVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D +++AV + A FLE SAKN+ +V++ F
Sbjct: 123 CDLVTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAF 162
>gi|131803|sp|P10536.1|RAB1B_RAT RecName: Full=Ras-related protein Rab-1B
gi|57006|emb|CAA32105.1| unnamed protein product [Rattus sp.]
Length = 201
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTM---AAEIKKRMGPG 176
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+A + LK + G CC
Sbjct: 177 AASGGERPNLKIDSTPVKSASGGCC 201
>gi|154339774|ref|XP_001565844.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063162|emb|CAM45362.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 200
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 110/160 (68%), Gaps = 3/160 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ L + K +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLDSKVIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYD T E+F N+ + W E++ Y++ ++ KILVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKT-WLSEIDKYAS-ENVNKILVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D +++AV + A FLE SAKN+ +V++ F
Sbjct: 123 CDLVTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAF 162
>gi|427782855|gb|JAA56879.1| Putative rab8a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 207
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 119/171 (69%), Gaps = 5/171 (2%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIW 66
SYD+ FK+LLIGDSGVGK+SIL S++ D S TIG+DFKI+++ + GK++KL IW
Sbjct: 4 SYDFLFKLLLIGDSGVGKTSILFRF-SDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQIW 62
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+T++YYRGA GI+LVYDVT+ TF N+ + W + + ++ D K+++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTKEATFENIKT-WIRNTDEHAA-ADVEKMILG 120
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
NK D + R V++E G LA EH F+E SA ++ +V++ F L I E
Sbjct: 121 NKCDMNELRQVSKERGEKLAIEHNIKFMETSAVSSINVEEAFYTLARDIKE 171
>gi|327287404|ref|XP_003228419.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 212
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 111/160 (69%), Gaps = 3/160 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + G+ +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGRTIKLQIWDT 67
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +++F N+ +W +E+ Y++ ++ K++VGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNM-HLWMEEINRYAS-ENVNKLIVGNK 125
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D S++AV A FLE SAKN +V+Q F
Sbjct: 126 SDLTSKKAVDYTTAKEYADSLGVPFLETSAKNATNVEQAF 165
>gi|18447917|dbj|BAB84324.1| ras-related protein RAB8-3 [Nicotiana tabacum]
Length = 216
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 128/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F +D+ ++ E S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAESDSKAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + NQ + +S + CC
Sbjct: 190 PQTIRI-NQPDQAAGASQSVQKSACC 214
>gi|417398094|gb|JAA46080.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 267
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|198469194|ref|XP_002134246.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
gi|198146758|gb|EDY72873.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 132/208 (63%), Gaps = 6/208 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++GNK D +R V +E G +A+EH F+E SAK+ ++++ F +L IL+ S E
Sbjct: 119 ILGNKCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNTNIERAFCELAEAILDKTSGKE 178
Query: 184 QGSAVVKNQILKQKEVQESARG-GNCCS 210
+A +++ + + A G CC+
Sbjct: 179 --AAENPERVVIDRRNNDKAPGYSKCCA 204
>gi|348577589|ref|XP_003474566.1| PREDICTED: ras-related protein Rab-2B-like isoform 2 [Cavia
porcellus]
Length = 216
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 131/208 (62%), Gaps = 15/208 (7%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++ +S++ + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +S R V REEG A+EH +F+E SAK +V++ F + E+ ++QG
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAF---INTAKEIYRKIQQG 174
Query: 186 SAVVKNQ-----ILKQKEVQESARGGNC 208
V N+ I Q+ + SA G C
Sbjct: 175 LFDVHNEANGIKIGPQQSIATSAGPGAC 202
>gi|1588651|prf||2209256A rab2 gene
Length = 220
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|357628401|gb|EHJ77744.1| small GTP-binding protein [Danaus plexippus]
Length = 202
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 116/170 (68%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ L + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLDLDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +++F+N+ W +E++ Y+ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEIDRYACDS-VNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++AV A++ FLE SAKN+ +V+Q F + +I
Sbjct: 120 GNKCDLTTKKAVDYTTAKQYAEQLGIPFLETSAKNSTNVEQAFMTMAAEI 169
>gi|260834761|ref|XP_002612378.1| hypothetical protein BRAFLDRAFT_58617 [Branchiostoma floridae]
gi|229297755|gb|EEN68387.1| hypothetical protein BRAFLDRAFT_58617 [Branchiostoma floridae]
Length = 214
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYE 169
>gi|356563372|ref|XP_003549938.1| PREDICTED: GTP-binding protein YPTM2-like isoform 2 [Glycine max]
Length = 215
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 116/183 (63%), Gaps = 16/183 (8%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMIL-------------AQEHKCLFLECSAKNTEDVKQCFKDLL 172
GNK D + + V+ E ++ A E F+E SAKN +V+Q F +
Sbjct: 120 GNKCDLTANKVVSSETAKVILNFVVLFLLTSAFADEIGIPFMETSAKNATNVEQAFMAMA 179
Query: 173 YKI 175
+I
Sbjct: 180 AEI 182
>gi|71026455|ref|XP_762899.1| small GTP-binding protein Rab1 [Theileria parva strain Muguga]
gi|68349851|gb|EAN30616.1| small GTP-binding protein rab1 [Theileria parva]
Length = 227
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 120/183 (65%), Gaps = 13/183 (7%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSL-------ISNSVHDP-SPTIGVDFKIKLLTVGGKRL 61
YDY FKI++IGDSG GKSS+LL I N+ + TIGVDFKIK + + +
Sbjct: 4 YDYLFKIIVIGDSGTGKSSLLLRFAVFLFIFIDNTYSESYMSTIGVDFKIKTVKIDNTTI 63
Query: 62 KLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCV 121
KL IWDTAGQERF T+TS+YYRGAHGII VYDVT + +F +++ W ++++ Y+T+ C
Sbjct: 64 KLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC- 122
Query: 122 KILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILE 177
K+L+GNK+D R V+ +E +A+++ ++E SAK +V++ F K L K+ +
Sbjct: 123 KLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQ 182
Query: 178 VPS 180
PS
Sbjct: 183 YPS 185
>gi|195399732|ref|XP_002058473.1| GJ14443 [Drosophila virilis]
gi|194142033|gb|EDW58441.1| GJ14443 [Drosophila virilis]
Length = 205
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 128/207 (61%), Gaps = 10/207 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +E+F N+ W +E+E Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVPSLL 182
GNK D +++ V A + FLE SAK+ +V+Q F + +I + PS
Sbjct: 123 GNKSDLTTKKVVDHTTAAEYAHQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSA 182
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
++ VK + Q E+ + G CC
Sbjct: 183 TDNASKVK---IDQGRPVENTKSG-CC 205
>gi|388855810|emb|CCF50594.1| probable GTP-binding protein ypt1 [Ustilago hordei]
Length = 208
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 129/209 (61%), Gaps = 17/209 (8%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 67
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +TF+N+ W +E++ Y+ + K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQ-WLQEIDRYAC-EGVNKLLVGNK 125
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D +++ V A + + FLE SAK+ +V+Q F + +I + GS+
Sbjct: 126 SDLTNKKVVEYATAKEFADQLQIPFLETSAKSATNVEQAFLTMAKQIKD-----RMGSST 180
Query: 189 VKNQ--------ILKQKEVQESARGGNCC 209
V NQ + + V + + GG CC
Sbjct: 181 VNNQAGGKSTLKVGAGQNVSQQSNGG-CC 208
>gi|225452278|ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis vinifera]
gi|296087576|emb|CBI34832.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SYDY FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ G+ +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTIDGRPIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++ ++ N + +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMTIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D RAV++EEG A+E+ LFLE SA+ ++V++ F +IL+
Sbjct: 118 GNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAARILQ 169
>gi|428184440|gb|EKX53295.1| hypothetical protein GUITHDRAFT_91995 [Guillardia theta CCMP2712]
Length = 201
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 116/179 (64%), Gaps = 6/179 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ L + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+ N K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WMNEIDRYA-NDKVNKMLVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
D +++ V A + FLE SAK++ +V+Q F + E+ + + Q A
Sbjct: 123 CDLTAKKVVDYNTAKEFADQLGIPFLETSAKDSTNVEQAF---ITMAAEIKARMAQAPA 178
>gi|328767509|gb|EGF77558.1| hypothetical protein BATDEDRAFT_20617 [Batrachochytrium
dendrobatidis JAM81]
Length = 208
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 114/164 (69%), Gaps = 5/164 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLT 64
N SYDY K+LLIGDSGVGKS +LL S+ PS TIG+DFKI+ + + GKR+KL
Sbjct: 6 NASYDYLIKLLLIGDSGVGKSCLLLRF-SDDSFTPSFITTIGIDFKIRTIELDGKRIKLQ 64
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+T++YYRGA GI+L YDVT +F N+ + W + +E +++ + KIL
Sbjct: 65 IWDTAGQERFRTITTAYYRGAMGILLTYDVTDERSFNNIRN-WIRNIEQHAS-EGVNKIL 122
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
+GNK D ++ +++E+G LA EH FLE SAK+ V++ F
Sbjct: 123 IGNKCDILDKKVISKEQGQALADEHGIKFLETSAKSNIGVEEAF 166
>gi|322786717|gb|EFZ13086.1| hypothetical protein SINV_00792 [Solenopsis invicta]
Length = 206
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 128/205 (62%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +ETF N+ W +E++ Y+ + + K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A + FLE SAKN +V+Q F + +I G
Sbjct: 123 GNKCDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSG 182
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
++ N++ ++ ES++ G CC
Sbjct: 183 ASDPANKVKIEHGRPIESSKSG-CC 206
>gi|195042188|ref|XP_001991383.1| GH12621 [Drosophila grimshawi]
gi|193901141|gb|EDW00008.1| GH12621 [Drosophila grimshawi]
Length = 204
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 133/208 (63%), Gaps = 6/208 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++GNK D +R V +E G +A+EH F+E SAK+ ++++ F +L IL+ + E
Sbjct: 119 ILGNKCDMTDKRVVNKERGEAIAREHSIRFMETSAKSNINIERAFCELAEAILDKTAGRE 178
Query: 184 QGSAVVKNQILKQKEVQESARGGN-CCS 210
SA +++ + + A G N CC+
Sbjct: 179 --SAENPERVVIDRGNSDKAPGYNKCCA 204
>gi|145539263|ref|XP_001455326.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423125|emb|CAK87929.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 120/176 (68%), Gaps = 9/176 (5%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPT-IGVDFKIKLLTVGGKRLKLTIWDT 68
YD+ FK+LLIG SGVGKS +L+ + N+ + IGVDFKIK + + K +KL IWDT
Sbjct: 9 YDHLFKLLLIGTSGVGKSCMLMRYVDNNFTNNFYNTIGVDFKIKSIFLENKNIKLQIWDT 68
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYS-------TNQDCV 121
AGQ+RF T+T SYYRGAHGII+VYD+T RE+F ++ +W E++ Y+ +D +
Sbjct: 69 AGQDRFRTITCSYYRGAHGIIIVYDITDRESFDSV-KMWMSEIDKYTHGITHRYAQEDVI 127
Query: 122 KILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
++LVGNK D D +RAV+ EEG LA++ K F+E SAK + +++Q F + +LE
Sbjct: 128 RMLVGNKCDVDDKRAVSYEEGEALAKQLKLQFIETSAKLSTNIEQSFLTIAKNVLE 183
>gi|195134256|ref|XP_002011553.1| GI11034 [Drosophila mojavensis]
gi|193906676|gb|EDW05543.1| GI11034 [Drosophila mojavensis]
Length = 204
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 120/177 (67%), Gaps = 3/177 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
++GNK D +R V++E G +A+EH F+E SAK+ ++++ F +L IL+ S
Sbjct: 119 ILGNKCDMSDKRVVSKERGEAIAREHSIRFMETSAKSNINIERAFCELAEAILDKTS 175
>gi|363748678|ref|XP_003644557.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888189|gb|AET37740.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
Length = 204
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 116/175 (66%), Gaps = 3/175 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIGDSGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ + W +E++ Y T VK+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKT-WLQEIDRYGT-AGVVKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
GNK D ++ V E A LE SA ++ +V++ F + +I E S
Sbjct: 120 GNKNDLKDKKVVDFEVAKEFADSLSIPVLETSALDSSNVEEAFLTMARQIKETMS 174
>gi|327505559|gb|AEA92307.1| Rab3 [Hevea brasiliensis]
Length = 216
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 21/212 (9%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F +D+ ++ E S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKKRLAETDSKAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGN------CC 209
Q +K + ++A GG CC
Sbjct: 190 P-------QTIKINQPDQAASGGQAAQKSACC 214
>gi|449460967|ref|XP_004148215.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
gi|449528087|ref|XP_004171038.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
Length = 216
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 129/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKVLVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F +D+ ++ + S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLADTDSKAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
S + NQ + ++A+ CC
Sbjct: 190 P-STIKINQQDQGANAGQAAQKSACC 214
>gi|307171708|gb|EFN63443.1| Ras-related protein Rab-10 [Camponotus floridanus]
Length = 200
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 118/174 (67%), Gaps = 3/174 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
++GNK D + +R V+ E+G +A+EH F+E SAK ++ + F +L IL+
Sbjct: 119 ILGNKSDMEEKRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILD 172
>gi|449455912|ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
gi|449492910|ref|XP_004159138.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
Length = 211
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 116/172 (67%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SYDY FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ + +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTIDARPIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++ ++ N + +LV
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMSIMLV 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D RAV++EEG A+E+ LFLE SA+ ++V++ F KIL+
Sbjct: 118 GNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 169
>gi|73535753|pdb|1Z0A|A Chain A, Gdp-Bound Rab2a Gtpase
gi|73535754|pdb|1Z0A|B Chain B, Gdp-Bound Rab2a Gtpase
gi|73535755|pdb|1Z0A|C Chain C, Gdp-Bound Rab2a Gtpase
gi|73535756|pdb|1Z0A|D Chain D, Gdp-Bound Rab2a Gtpase
Length = 174
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 118/173 (68%), Gaps = 7/173 (4%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLT 64
++Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL
Sbjct: 5 SAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQ 62
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L
Sbjct: 63 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIML 120
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
+GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 121 IGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 173
>gi|212724108|ref|NP_001131632.1| uncharacterized protein LOC100192989 [Zea mays]
gi|242090779|ref|XP_002441222.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
gi|194690528|gb|ACF79348.1| unknown [Zea mays]
gi|194692096|gb|ACF80132.1| unknown [Zea mays]
gi|194700986|gb|ACF84577.1| unknown [Zea mays]
gi|194703832|gb|ACF86000.1| unknown [Zea mays]
gi|195628548|gb|ACG36104.1| ras-related protein ARA-3 [Zea mays]
gi|241946507|gb|EES19652.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
Length = 215
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 128/207 (61%), Gaps = 9/207 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V+Q F +D+ ++ E S E
Sbjct: 130 ADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKPE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCCS 210
A+ N+ + E + R C S
Sbjct: 190 D-KAIKINKPDQGSEAPAAQRSACCGS 215
>gi|268567998|ref|XP_002640132.1| C. briggsae CBR-RAB-10 protein [Caenorhabditis briggsae]
Length = 201
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 127/207 (61%), Gaps = 8/207 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ YD FK+LLIGDSGVGK+ IL ++ + TIG+DFKIK + + GK++KL
Sbjct: 1 MARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + ++ +++ +D VK+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL-EVPSLL 182
++GNK D R V+++ G +AQ+H F E SAK V F DL IL ++P
Sbjct: 119 ILGNKCDMSDRRVVSKDRGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAILAKMPDST 178
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
++ S N + + Q G CC
Sbjct: 179 DEQSRDTINPV----QPQRPGGSGGCC 201
>gi|350535551|ref|NP_001233944.1| GTP-binding protein [Solanum lycopersicum]
gi|313029|emb|CAA49600.1| GTP-binding protein [Solanum lycopersicum]
Length = 216
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 129/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGD+GVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDTGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F KD+ ++ E S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGKDIKQRLSESDSKTE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
S + NQ + + A+ +CC
Sbjct: 190 PQSIRI-NQSDQAGTAGQGAQKSSCC 214
>gi|440798712|gb|ELR19779.1| Rasrelated protein Rab-2B, putative [Acanthamoeba castellanii str.
Neff]
Length = 216
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 113/163 (69%), Gaps = 7/163 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+ VGKS ILL SVHD TIGV+F +++ +GG+ +KL I
Sbjct: 2 SYAYLFKYIIIGDTSVGKSCILLQFTDKRFQSVHDI--TIGVEFGARVVKIGGEDVKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L VW ++ +S+ Q+ V IL
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFDHL-LVWLEDARQHSS-QNMVIILC 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D + +RAV+R+EG A EH LFLE SAK E+V++ F
Sbjct: 118 GNKADLEHKRAVSRKEGERFAAEHGLLFLETSAKTAENVEEAF 160
>gi|340713998|ref|XP_003395520.1| PREDICTED: ras-related protein Rab-1A-like [Bombus terrestris]
gi|350418865|ref|XP_003491994.1| PREDICTED: ras-related protein Rab-1A-like [Bombus impatiens]
gi|380024902|ref|XP_003696227.1| PREDICTED: ras-related protein Rab-1A-like [Apis florea]
Length = 206
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 128/205 (62%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +ETF N+ W +E++ Y+ + + K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A + FLE SAKN +V+Q F + +I G
Sbjct: 123 GNKCDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSG 182
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
++ N++ ++ ES++ G CC
Sbjct: 183 NSDPANKVKIEHGRPIESSKSG-CC 206
>gi|550062|gb|AAA60241.1| GTP-binding protein [Homo sapiens]
Length = 212
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLMFMETSAKTASNVEEAFINTAKEIYE 169
>gi|357135065|ref|XP_003569132.1| PREDICTED: ras-related protein RABD1-like [Brachypodium distachyon]
Length = 205
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 108/160 (67%), Gaps = 3/160 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDS VGKS +LL ++ D TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ C K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQ-WLSEIDRYASDSVC-KLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D + V EE LA FLE SAK + +V++ F
Sbjct: 124 CDLVDSKVVDTEEAKALADSLGMTFLETSAKESINVEKAF 163
>gi|224109576|ref|XP_002315241.1| predicted protein [Populus trichocarpa]
gi|118482120|gb|ABK92991.1| unknown [Populus trichocarpa]
gi|222864281|gb|EEF01412.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 129/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + G+R+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGRRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F +D+ +I E S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRISETDSRAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + NQ + ++A+ CC
Sbjct: 190 PQTIRI-NQPDQAANGGQAAQKSACC 214
>gi|66814402|ref|XP_641380.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134228|sp|P20790.1|RAB8A_DICDI RecName: Full=Ras-related protein Rab-8A; AltName: Full=GTP-binding
protein SAS1
gi|167877|gb|AAA33249.1| GTP-binding protein SAS1 [Dictyostelium discoideum]
gi|60469254|gb|EAL67248.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 126/192 (65%), Gaps = 11/192 (5%)
Query: 1 MGSKVGNNS--YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTV 56
M S N S YDY K+LLIGDSGVGKS +LL +S PS TIG+DFKI+ + +
Sbjct: 1 MTSPATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFT-PSFITTIGIDFKIRTIEL 59
Query: 57 GGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYST 116
GKR+KL IWDTAGQERF T+T++YYRGA GI+LVYDVT ++F N+ + W + +E ++T
Sbjct: 60 EGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHAT 118
Query: 117 NQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLL 172
+ K+L+GNK D ++ V G LA E+ FLE SAKN+ +V++ F KD+
Sbjct: 119 DS-VNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIK 177
Query: 173 YKILEVPSLLEQ 184
++++ P+ Q
Sbjct: 178 KRMIDTPNEQPQ 189
>gi|289741231|gb|ADD19363.1| Rab protein 10 [Glossina morsitans morsitans]
Length = 204
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 133/208 (63%), Gaps = 6/208 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++GNK D +R V++E G +A+EH F+E SAK+ ++++ F +L IL+ + E
Sbjct: 119 ILGNKCDMADKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTAGRE 178
Query: 184 QGSAVVKNQILKQKEVQESARG-GNCCS 210
SA +++ + E A +CCS
Sbjct: 179 --SAENPERVVVDRRNNEKAPAYKSCCS 204
>gi|115388891|ref|XP_001211951.1| GTP-binding protein SAS1 [Aspergillus terreus NIH2624]
gi|114196035|gb|EAU37735.1| GTP-binding protein SAS1 [Aspergillus terreus NIH2624]
Length = 206
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 118/173 (68%), Gaps = 5/173 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
IL+GNK D + +RAV+ E+G LA E FLE SAKN ++++ F +L +I
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEI 171
>gi|332031583|gb|EGI71055.1| Ras-related protein Rab-10 [Acromyrmex echinatior]
Length = 200
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 118/174 (67%), Gaps = 3/174 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
++GNK D + +R V+ E+G +A+EH F+E SAK ++ + F +L IL+
Sbjct: 119 ILGNKSDMEEKRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILD 172
>gi|323337834|gb|EGA79075.1| Ypt1p [Saccharomyces cerevisiae Vin13]
Length = 219
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 129/195 (66%), Gaps = 5/195 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIG+SGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRG+HGII+VYDVT +E+F N +W +E++ Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATST-VLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +R V + A +K FLE SA ++ +V+ F + +I E S+ +Q
Sbjct: 120 GNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKE--SMSQQK 177
Query: 186 SAVVKNQILKQKEVQ 200
++ +Q+E Q
Sbjct: 178 PERNHSEEGRQRERQ 192
>gi|348531422|ref|XP_003453208.1| PREDICTED: ras-related protein Rab-2A-like [Oreochromis niloticus]
Length = 212
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|330799096|ref|XP_003287584.1| Rab GTPase [Dictyostelium purpureum]
gi|325082448|gb|EGC35930.1| Rab GTPase [Dictyostelium purpureum]
Length = 211
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 126/191 (65%), Gaps = 11/191 (5%)
Query: 2 GSKVGNNS--YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVG 57
G+ N S YDY K+LLIGDSGVGKS +LL +S PS TIG+DFKI+ + +
Sbjct: 5 GAPASNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFT-PSFITTIGIDFKIRTIELE 63
Query: 58 GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTN 117
GKR+KL IWDTAGQERF T+T++YYRGA GI+LVYDVT ++F N+ + W + +E ++T+
Sbjct: 64 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHATD 122
Query: 118 QDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLY 173
K+L+GNK D ++ V G LA E+ FLE SAKN+ +V++ F KD+
Sbjct: 123 S-VNKMLIGNKCDMAEKKVVDSARGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKK 181
Query: 174 KILEVPSLLEQ 184
++++ P+ Q
Sbjct: 182 RMIDTPNEPPQ 192
>gi|281203623|gb|EFA77820.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 214
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 120/175 (68%), Gaps = 9/175 (5%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIW 66
+YDY K+LLIGDSGVGKS +LL +S PS TIG+DFKI+ + + GKR+KL IW
Sbjct: 14 AYDYLIKLLLIGDSGVGKSCLLLRFSEDSFT-PSFITTIGIDFKIRTIELEGKRIKLQIW 72
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+T++YYRGA GI+LVYDVT ++F N+ + W + +E ++T + K+L+G
Sbjct: 73 DTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHAT-ESVNKMLIG 130
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILE 177
NK D ++ V G LA EH FLE SAKN+ +V++ F KD+ +I++
Sbjct: 131 NKCDLPEKKVVDSSRGKALADEHGIKFLETSAKNSINVEEAFISLAKDIKKRIID 185
>gi|327356550|gb|EGE85407.1| GTPase Rab1/YPT1 [Ajellomyces dermatitidis ATCC 18188]
Length = 232
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 129/211 (61%), Gaps = 11/211 (5%)
Query: 3 SKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRL 61
+ +N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +
Sbjct: 29 TDANHNRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTV 88
Query: 62 KLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCV 121
KL IWDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T +
Sbjct: 89 KLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVN 146
Query: 122 KILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL 181
K+LVGNK D + ++AV A FLE SAK+ +V+Q F + +I E
Sbjct: 147 KLLVGNKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQIKE---- 202
Query: 182 LEQGSAVVKNQ---ILKQKEVQESARGGNCC 209
G+A V N+ + Q + +S G CC
Sbjct: 203 -RMGTATVNNKPTVQVGQGQGVQSGSAGGCC 232
>gi|281501032|pdb|3L0I|B Chain B, Complex Structure Of Sidm/drra With The Wild Type Rab1
gi|281501034|pdb|3L0I|D Chain D, Complex Structure Of Sidm/drra With The Wild Type Rab1
Length = 199
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 111/163 (68%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 27 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 86
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 87 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 144
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D +++ V A FLE SAKN +V+Q F
Sbjct: 145 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSF 187
>gi|225712954|gb|ACO12323.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGD+GVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDTGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +++F NL W +E++ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQ-WLQEIDRYAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A + FLE SAKN +V+Q F + +I
Sbjct: 120 GNKCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAEI 169
>gi|7533034|gb|AAF63333.1|AF244545_1 YptA [Aspergillus awamori]
Length = 201
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 118/187 (63%), Gaps = 8/187 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTMKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + ++ V A FLE SAKN +V+Q F + +I E G
Sbjct: 120 GNKSDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE-----RMG 174
Query: 186 SAVVKNQ 192
+A V N+
Sbjct: 175 TATVNNK 181
>gi|10946940|ref|NP_067493.1| ras-related protein Rab-2A [Mus musculus]
gi|1709998|sp|P53994.1|RAB2A_MOUSE RecName: Full=Ras-related protein Rab-2A
gi|1177547|emb|CAA64684.1| GTP-binding protein [Mus musculus]
gi|26347751|dbj|BAC37524.1| unnamed protein product [Mus musculus]
gi|74137386|dbj|BAE35742.1| unnamed protein product [Mus musculus]
gi|74183144|dbj|BAE22525.1| unnamed protein product [Mus musculus]
gi|74194509|dbj|BAE37298.1| unnamed protein product [Mus musculus]
gi|74198093|dbj|BAE35226.1| unnamed protein product [Mus musculus]
gi|74211806|dbj|BAE29254.1| unnamed protein product [Mus musculus]
gi|74222313|dbj|BAE26957.1| unnamed protein product [Mus musculus]
gi|112292939|dbj|BAF02847.1| Rab2A [Mus musculus]
gi|148673733|gb|EDL05680.1| RAB2, member RAS oncogene family [Mus musculus]
Length = 212
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|340381310|ref|XP_003389164.1| PREDICTED: ras-related protein Rab-2B-like isoform 1 [Amphimedon
queenslandica]
Length = 217
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 113/163 (69%), Gaps = 7/163 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++ + GK++KL I
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W + +S++ + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFEHLTS-WLDDARQHSSS-NMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D D++R V EEG+ AQEH +F+E SAK +V++ F
Sbjct: 118 GNKSDLDAKRDVKFEEGLAFAQEHGLVFMETSAKTAANVEEAF 160
>gi|195053856|ref|XP_001993842.1| GH18937 [Drosophila grimshawi]
gi|193895712|gb|EDV94578.1| GH18937 [Drosophila grimshawi]
Length = 205
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 128/207 (61%), Gaps = 10/207 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +E+F N+ W +E+E Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVPSLL 182
GNK D +++ V A + FLE SAK+ +V+Q F + +I + PS
Sbjct: 123 GNKSDLTTKKVVDHTIAAEYANQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSA 182
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
++ VK + Q E+ R G CC
Sbjct: 183 TDNASKVK---IDQGRPVENNRSG-CC 205
>gi|74193229|dbj|BAE20616.1| unnamed protein product [Mus musculus]
Length = 201
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+L+IGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLMIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI 169
>gi|410930247|ref|XP_003978510.1| PREDICTED: ras-related protein Rab-2A-like [Takifugu rubripes]
Length = 212
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|121714245|ref|XP_001274733.1| Rab GTPase SrgA, putative [Aspergillus clavatus NRRL 1]
gi|119402887|gb|EAW13307.1| Rab GTPase SrgA, putative [Aspergillus clavatus NRRL 1]
Length = 206
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 117/173 (67%), Gaps = 5/173 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
IL+GNK D + +RAV+ E+G LA E FLE SAKN ++++ F +L I
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASAI 171
>gi|357496971|ref|XP_003618774.1| Small GTP-binding protein [Medicago truncatula]
gi|355493789|gb|AES74992.1| Small GTP-binding protein [Medicago truncatula]
Length = 211
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 130/217 (59%), Gaps = 22/217 (10%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SYDY FK ++IGD+GVGKS +LL VHD TIGV+F ++LT+ + +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMLTIDSRPIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++ ++ N + L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMTITLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D RAV++EEG A+E+ LF+E SAK ++V++ F KIL+ ++ G
Sbjct: 118 GNKCDLSHRRAVSKEEGEQFAKENGLLFMEASAKTAQNVEEAFIKTAAKILQN---IQDG 174
Query: 186 SAVVKNQI------LKQKEVQESAR------GGNCCS 210
V N+ + + Q R GG CCS
Sbjct: 175 VFDVSNETCGIKVGYGRPQGQAGGRDGTVAAGGACCS 211
>gi|340519584|gb|EGR49822.1| secretion-related GTPase [Trichoderma reesei QM6a]
Length = 203
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 116/171 (67%), Gaps = 5/171 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLT 64
N +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+KL
Sbjct: 4 NRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+T++YYRGA GI+LVYDVT +F+N+ + W + VE ++T + KIL
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFSNIRT-WFQNVEQHAT-EGVNKIL 120
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
+GNK D + +R V+ E+G LA E FLE SAK+ ++ Q F L I
Sbjct: 121 IGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSLAADI 171
>gi|432915657|ref|XP_004079196.1| PREDICTED: ras-related protein Rab-2A-like [Oryzias latipes]
Length = 212
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|88192430|pdb|2BCG|Y Chain Y, Structure Of Doubly Prenylated Ypt1:gdi Complex
Length = 206
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 132/214 (61%), Gaps = 20/214 (9%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIG+SGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRG+HGII+VYDVT +E+F N +W +E++ Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATST-VLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL--- 182
GNK D +R V + A +K FLE SA ++ +V+ F + +I E S
Sbjct: 120 GNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLN 179
Query: 183 -------EQGSAVVKNQILKQKEVQESARGGNCC 209
++G+ +K Q L + GG CC
Sbjct: 180 ETTQKKEDKGNVNLKGQSL-------TNTGGCCC 206
>gi|443896742|dbj|GAC74085.1| GTP-binding protein SEC4 [Pseudozyma antarctica T-34]
Length = 208
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 136/210 (64%), Gaps = 10/210 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLT 64
N YD+ K+LLIGDSGVGKS +LL ++ PS TIG+DFKI+ + + GKR+KL
Sbjct: 3 NPHYDFLIKLLLIGDSGVGKSCLLLRFCDDA-WTPSFITTIGIDFKIRTIELDGKRIKLQ 61
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+T++YYRGA GI+LV+DVT +++F N+ + W +E +++ + KIL
Sbjct: 62 IWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRT-WHANIEQHAS-EGVSKIL 119
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPS 180
+GNK D + +RAV+ E+G LA+E ++E SAK+ +V++ F +++ ++++ +
Sbjct: 120 IGNKSDWEEKRAVSTEQGEELARELGIPYIETSAKSNANVEEAFFNLAREVKTRLIDTAA 179
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCCS 210
+ + A + + A GG CC+
Sbjct: 180 VTQASPAAAAGNVNVNSAPKSGATGG-CCN 208
>gi|308321720|gb|ADO28003.1| ras-related protein rab-10 [Ictalurus furcatus]
Length = 200
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 118/171 (69%), Gaps = 7/171 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
+YD FK+LLIGDSGVGK+ +L ++ + TIG+DFKIK + + GKR+KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRIKLQIWD 64
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +E ++ N+D K+L+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGILLVYDITNAKSFENISK-WLRNIEEHA-NEDVEKMLLGN 122
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYK 174
K D + R V++ +G +A EH F E SAK ++++ F +D+L+K
Sbjct: 123 KCDMEDVRVVSKAKGEQIASEHNIRFFETSAKANINIEKAFLTLAEDILHK 173
>gi|223649310|gb|ACN11413.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 128/206 (62%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLE 183
GNK D +++ V A FLE SAK+ +V+Q F + +I + P
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATT 179
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
G+ K+ + Q + A GG CC
Sbjct: 180 GGNE--KSNVKIQSTPVKPASGG-CC 202
>gi|356550253|ref|XP_003543502.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 215
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 125/206 (60%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEQDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKVLVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+R V +G LA E+ F E SAK +V++ F +D+ ++ + S E
Sbjct: 130 ADMDESKRVVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ NQ L E A+ CC
Sbjct: 190 PAGIKINNQ-LDHATAGEVAQKSACC 214
>gi|302756377|ref|XP_002961612.1| rab family GTPase [Selaginella moellendorffii]
gi|302775546|ref|XP_002971190.1| rab family GTPase [Selaginella moellendorffii]
gi|300161172|gb|EFJ27788.1| rab family GTPase [Selaginella moellendorffii]
gi|300170271|gb|EFJ36872.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 130/214 (60%), Gaps = 10/214 (4%)
Query: 2 GSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKR 60
G+ YDY K+LLIGDSGVGKS +LL +S TIG+DFKI+ + + GKR
Sbjct: 4 GAGRARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTVDLDGKR 63
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
+KL IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ +
Sbjct: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NV 121
Query: 121 VKILVGNKVDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKI 175
KILVGNK D D S+RAV+ E G LA E F E SAK +V++ F D+ ++
Sbjct: 122 NKILVGNKADMDESKRAVSTERGQALANEFGIKFFETSAKTNLNVEKVFFTIAGDIKRRL 181
Query: 176 LEVPSLLEQGSAVVKNQILKQKEVQESARGGNCC 209
E S E + N +L + Q S + + C
Sbjct: 182 AETDSRPE--PPRINNIVLDPSKDQGSDKAKSTC 213
>gi|345306838|ref|XP_001513461.2| PREDICTED: ras-related protein Rab-2A-like [Ornithorhynchus
anatinus]
Length = 212
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|327260900|ref|XP_003215271.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 203
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 128/202 (63%), Gaps = 6/202 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
+DY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 HDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQGSA 187
D +++ V A FLE SAKN +V+Q F + +I + + G A
Sbjct: 124 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 183
Query: 188 VVKNQILKQKEVQESARGGNCC 209
N ++ V++S+ G CC
Sbjct: 184 EKSNVKIQSTPVKQSS--GGCC 203
>gi|225712878|gb|ACO12285.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +++F NL W +E+ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQ-WLQEIARYAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A + FLE SAKN +V+Q F + +I
Sbjct: 120 GNKCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNVTNVEQAFMTMAAEI 169
>gi|117939065|dbj|BAF36686.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 191
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 124/192 (64%), Gaps = 3/192 (1%)
Query: 16 ILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTAGQERF 74
+LLIGDSGVGKS +LL ++ TIGVDFKI+ + +GGK +KL IWDTAGQ+RF
Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYSGTYIATIGVDFKIRTIQIGGKVIKLQIWDTAGQDRF 60
Query: 75 GTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSE 134
T+TSSYYRGA+GII+VYDVT R++F N+ +W KE+E Y++ C ++LVGNK D S+
Sbjct: 61 RTITSSYYRGANGIIIVYDVTNRDSFNNV-QMWMKEIESYASEGVC-RLLVGNKCDLTSK 118
Query: 135 RAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVKNQIL 194
+ V LA FLE SAKN +V+Q F+ + +I++ + + + K ++
Sbjct: 119 KVVDYNTANQLADSLAISFLETSAKNATNVEQAFQTMATEIMKHTAPVHETPQSGKTDVV 178
Query: 195 KQKEVQESARGG 206
EV+ + + G
Sbjct: 179 ALHEVKSNDKCG 190
>gi|253741640|gb|EES98506.1| Rab1a [Giardia intestinalis ATCC 50581]
Length = 212
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 135/211 (63%), Gaps = 13/211 (6%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIW 66
+++Y FK+L+IGDSGVGKS++LL L + + + S TIGVDFK+K L + +KL IW
Sbjct: 5 NHEYLFKLLVIGDSGVGKSALLLRLC-DKIFNASYITTIGVDFKVKSLNIKDDTVKLQIW 63
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQE+F T+TS+YYRGAHGI++VYDVT RE+F N+ + W KE+ ++N + VK ++G
Sbjct: 64 DTAGQEKFRTITSTYYRGAHGIMIVYDVTSRESFDNVKT-WLKEIANNASN-NVVKYIIG 121
Query: 127 NKVD-RDSERA-----VTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K D RD+ + V+ EEG A+E F+E S+K+ E+V+Q F+DL +I+
Sbjct: 122 SKKDLRDNAGSVNTSHVSTEEGRKFAEELGISFIETSSKSGENVEQAFEDLAARIIATQG 181
Query: 181 LLEQGSAVVKNQ--ILKQKEVQESARGGNCC 209
QG V N ++ + G CC
Sbjct: 182 TTAQGGGRVINSPAVVSLSDPTTKKDGKGCC 212
>gi|41393075|ref|NP_958862.1| ras-related protein Rab-2A [Danio rerio]
gi|27881912|gb|AAH44459.1| RAB2A, member RAS oncogene family [Danio rerio]
gi|182891762|gb|AAI65141.1| Rab2a protein [Danio rerio]
Length = 212
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|357125787|ref|XP_003564571.1| PREDICTED: ras-related protein RABE1a-like [Brachypodium
distachyon]
Length = 216
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 130/207 (62%), Gaps = 9/207 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 13 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 72
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + K+L+GNK
Sbjct: 73 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKVLIGNK 130
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV+ +G LA E+ F E SAK +V+Q F +D+ ++ E S E
Sbjct: 131 ADMDESKRAVSTAQGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKPE 190
Query: 184 QGSAVVKNQILKQKEVQESARGGNCCS 210
+ + N+ + E ES + C S
Sbjct: 191 DQTIKI-NKTGQGSEDPESQKSACCGS 216
>gi|409046045|gb|EKM55525.1| hypothetical protein PHACADRAFT_256210 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 110/160 (68%), Gaps = 3/160 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +TFTN+ W +E++ Y++ + K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D S++ V A + FLE SAKN +V+Q F
Sbjct: 124 SDLTSKKVVEYGVAKEFADQLSIPFLETSAKNATNVEQAF 163
>gi|357440493|ref|XP_003590524.1| Ras-like protein [Medicago truncatula]
gi|355479572|gb|AES60775.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 130/206 (63%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F +D+ ++ E S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAESDSKTE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + NQ + ++++ +CC
Sbjct: 190 PQTLKI-NQPDQGAGSAQASQTSSCC 214
>gi|384482285|pdb|3SFV|A Chain A, Crystal Structure Of The Gdp-Bound Rab1a S25n Mutant In
Complex With The Coiled-Coil Domain Of Lida From
Legionella Pneumophila
Length = 181
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGK+ +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 10 NPEYDYLFKLLLIGDSGVGKNCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 69
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 70 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 127
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 128 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 177
>gi|289740161|gb|ADD18828.1| GTPase Rab2 [Glossina morsitans morsitans]
Length = 213
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SA+ +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYE 169
>gi|255587494|ref|XP_002534292.1| protein with unknown function [Ricinus communis]
gi|223525564|gb|EEF28091.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 128/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F +D+ ++ + S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + NQ + ++A CC
Sbjct: 190 PQTIKI-NQPDQAGSASQAAPKSACC 214
>gi|242010199|ref|XP_002425860.1| RAB-2,4,14, putative [Pediculus humanus corporis]
gi|212509812|gb|EEB13122.1| RAB-2,4,14, putative [Pediculus humanus corporis]
Length = 212
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 116/172 (67%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W + +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLDDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D + +R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLEIKREVKKEEGEAFAREHGLIFMETSAKTATNVEEAFINTAKEIYE 169
>gi|195454241|ref|XP_002074152.1| GK12772 [Drosophila willistoni]
gi|194170237|gb|EDW85138.1| GK12772 [Drosophila willistoni]
Length = 205
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 128/207 (61%), Gaps = 10/207 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +E+F N+ W +E+E Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVPSLL 182
GNK D +++ V A + FLE SAK+ +V+Q F + +I + PS
Sbjct: 123 GNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSA 182
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
++ VK + Q E+ + G CC
Sbjct: 183 TDNASKVK---IDQGRPVENTKSG-CC 205
>gi|15232784|ref|NP_187601.1| RAB GTPase-like protein E1E [Arabidopsis thaliana]
gi|75204351|sp|Q9SF91.1|RAE1E_ARATH RecName: Full=Ras-related protein RABE1e; Short=AtRABE1e; AltName:
Full=Ras-related protein Rab8E; Short=AtRab8E
gi|6681329|gb|AAF23246.1|AC015985_4 putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|21536596|gb|AAM60928.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|90568022|gb|ABD94081.1| At3g09900 [Arabidopsis thaliana]
gi|110738463|dbj|BAF01157.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332641307|gb|AEE74828.1| RAB GTPase-like protein E1E [Arabidopsis thaliana]
Length = 218
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 125/207 (60%), Gaps = 8/207 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTI-GVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL ++ T G+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W K +E ++++ KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WMKNIEQHASDS-VNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK ++V+Q F KD+ ++ E + E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESDTKAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCCS 210
+ Q + + CCS
Sbjct: 190 PQGIKITKQDANKASSSSTNEKSACCS 216
>gi|225441149|ref|XP_002267366.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297739984|emb|CBI30166.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 119/180 (66%), Gaps = 8/180 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL +S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLVKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V+Q F +D+ +I E S E
Sbjct: 130 ADMDESKRAVPTSQGQALADEYGIKFFETSAKTNFNVEQVFFSIARDIKQRIAESDSKAE 189
>gi|4506365|ref|NP_002856.1| ras-related protein Rab-2A isoform a [Homo sapiens]
gi|50979323|ref|NP_001003318.1| ras-related protein Rab-2A [Canis lupus familiaris]
gi|197098732|ref|NP_001126581.1| ras-related protein Rab-2A [Pongo abelii]
gi|302564413|ref|NP_001180789.1| ras-related protein Rab-2A [Macaca mulatta]
gi|350535689|ref|NP_001233386.1| ras-related protein Rab-2A [Pan troglodytes]
gi|296226560|ref|XP_002758983.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Callithrix
jacchus]
gi|301759885|ref|XP_002915755.1| PREDICTED: ras-related protein Rab-2A-like [Ailuropoda melanoleuca]
gi|332213898|ref|XP_003256067.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Nomascus
leucogenys]
gi|390475645|ref|XP_003734991.1| PREDICTED: ras-related protein Rab-2A isoform 2 [Callithrix
jacchus]
gi|402878329|ref|XP_003902845.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Papio anubis]
gi|403288788|ref|XP_003935569.1| PREDICTED: ras-related protein Rab-2A [Saimiri boliviensis
boliviensis]
gi|46577636|sp|P61019.1|RAB2A_HUMAN RecName: Full=Ras-related protein Rab-2A
gi|46577642|sp|P61105.1|RAB2A_CANFA RecName: Full=Ras-related protein Rab-2A
gi|75070519|sp|Q5R6B6.1|RAB2A_PONAB RecName: Full=Ras-related protein Rab-2A
gi|75075847|sp|Q4R4X6.1|RAB2A_MACFA RecName: Full=Ras-related protein Rab-2A
gi|20379036|gb|AAM21078.1|AF498930_1 small GTP binding protein RAB2A [Homo sapiens]
gi|35837|emb|CAA31411.1| unnamed protein product [Homo sapiens]
gi|164054|gb|AAA30888.1| GTP-binding protein (rab2) [Canis lupus familiaris]
gi|14286264|gb|AAH08929.1| RAB2A, member RAS oncogene family [Homo sapiens]
gi|54696258|gb|AAV38501.1| RAB2, member RAS oncogene family [Homo sapiens]
gi|55731983|emb|CAH92700.1| hypothetical protein [Pongo abelii]
gi|61358667|gb|AAX41604.1| RAB2 member RAS oncogene family [synthetic construct]
gi|67970120|dbj|BAE01404.1| unnamed protein product [Macaca fascicularis]
gi|67971014|dbj|BAE01849.1| unnamed protein product [Macaca fascicularis]
gi|119607233|gb|EAW86827.1| RAB2, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119607234|gb|EAW86828.1| RAB2, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|189065426|dbj|BAG35265.1| unnamed protein product [Homo sapiens]
gi|261860492|dbj|BAI46768.1| RAB2A, member RAS oncogene family [synthetic construct]
gi|312151824|gb|ADQ32424.1| RAB2A, member RAS oncogene family [synthetic construct]
gi|335773365|gb|AEH58368.1| Ras-related protein Rab-2A-like protein [Equus caballus]
gi|343960663|dbj|BAK61921.1| ras-related protein Rab-2A [Pan troglodytes]
gi|380783321|gb|AFE63536.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|383408523|gb|AFH27475.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|384948552|gb|AFI37881.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|410218884|gb|JAA06661.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410260538|gb|JAA18235.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410305644|gb|JAA31422.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410355261|gb|JAA44234.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|417397207|gb|JAA45637.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|396491326|ref|XP_003843542.1| similar to GTP-binding protein [Leptosphaeria maculans JN3]
gi|312220121|emb|CBY00063.1| similar to GTP-binding protein [Leptosphaeria maculans JN3]
Length = 206
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 12/211 (5%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G+ +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT + +F N+ + W VE ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDQRSFENIRT-WFSNVEQHAT-EGVNK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEV 178
IL+GNK D + +RAV+ E+G LA E FLE SAK+ +V + F D+ ++++
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSLASDIKKRLIDT 178
Query: 179 PSLLEQGSAVVKNQILKQKEVQESARGGNCC 209
+ +A V + + + GG CC
Sbjct: 179 ARTDQPQAAKVD---VGGQGGDNAGMGGKCC 206
>gi|311253799|ref|XP_001926739.2| PREDICTED: ras-related protein Rab-2A [Sus scrofa]
gi|385281364|gb|AFI57834.1| ras-related protein Rab-2A [Capra hircus]
Length = 212
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|297829522|ref|XP_002882643.1| hypothetical protein ARALYDRAFT_478314 [Arabidopsis lyrata subsp.
lyrata]
gi|297328483|gb|EFH58902.1| hypothetical protein ARALYDRAFT_478314 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTI-GVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL ++ T G+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W K +E ++++ KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WMKNIEQHASDS-VNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK ++V+Q F KD+ ++ E + E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESDTKAE 189
Query: 184 -QGSAVVKNQILKQKEVQESARGGNCCS 210
QG + K K + + CCS
Sbjct: 190 PQGIKITKKDANKASSSSTTEKSA-CCS 216
>gi|158343285|gb|ABW35315.1| Rab1A1 [Gymnochlora stellata]
gi|193875838|gb|ACF24555.1| Ras-related small GTPase Rab 1a [Gymnochlora stellata]
Length = 207
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 123/202 (60%), Gaps = 10/202 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK++LIGDSGVGKS +LL +S D TIGVDF+ + L + K +KL IWDT
Sbjct: 13 YDYLFKLVLIGDSGVGKSCLLLRFADDSFTDSYISTIGVDFRFRTLKINKKTVKLQIWDT 72
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TS+YYRGA GII+VYDVT E+F ++ W EV+ ++ C K+LVGNK
Sbjct: 73 AGQERFRTITSAYYRGADGIIMVYDVTSLESFEHVDE-WLNEVDRFAHENTC-KLLVGNK 130
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQGSA 187
D +R V+ E LAQ FLE SAK + +V F + +++ + ++ + G+A
Sbjct: 131 ADLTDDRKVSEESARALAQRLHIQFLETSAKTSTNVTTAFSLMAEELIATLKNVRKSGTA 190
Query: 188 VVKNQILKQKEVQESARGGNCC 209
+ K QE +G CC
Sbjct: 191 ----DVAKLSSTQEEKKG--CC 206
>gi|45382561|ref|NP_990559.1| ras-related protein Rab-2A [Gallus gallus]
gi|224046295|ref|XP_002198446.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Taeniopygia
guttata]
gi|82245348|sp|Q90965.1|RAB2A_CHICK RecName: Full=Ras-related protein Rab-2A
gi|664925|emb|CAA59004.1| GTP-binding protein [Gallus gallus]
gi|387017962|gb|AFJ51099.1| RAB2, member RAS oncogene family [Crotalus adamanteus]
Length = 212
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|66801519|ref|XP_629685.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208507|sp|P36409.2|RAB2A_DICDI RecName: Full=Ras-related protein Rab-2A
gi|60463063|gb|EAL61258.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 207
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 127/212 (59%), Gaps = 19/212 (8%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTIW 66
Y + FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ K +KL IW
Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDNKAIKLQIW 59
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQE F ++T SYYRG+ G +LVYD+TRR+TF +L + W K+ Y+ N + IL+G
Sbjct: 60 DTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHL-TCWLKDARSYA-NSNMTIILIG 117
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
NK D +S+RAV+ EEG A E+ +FLE SAK +V++ F + KI E +++G
Sbjct: 118 NKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEK---IQKGD 174
Query: 187 AVVKNQIL---------KQKEVQESARGGNCC 209
+ N+ KQ + GG CC
Sbjct: 175 FDINNESFGIKLGAPTSKQDGTDQKPAGGGCC 206
>gi|126338784|ref|XP_001365286.1| PREDICTED: ras-related protein Rab-1B-like [Monodelphis domestica]
Length = 201
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E+ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLEEINRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 120 GNKSDLTTKKVVDNPTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|156119376|ref|NP_001095172.1| ras-related protein Rab-2A [Oryctolagus cuniculus]
gi|266878|sp|Q01971.1|RAB2A_RABIT RecName: Full=Ras-related protein Rab-2A
gi|1696|emb|CAA48208.1| tubulovesicle-membrane-associated GTP-binding protein [Oryctolagus
cuniculus]
Length = 212
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|256073966|ref|XP_002573298.1| rab15 13 10 1 35 5 and [Schistosoma mansoni]
gi|360042736|emb|CCD78146.1| putative rab15, 13, 10, 1, 35, 5, and [Schistosoma mansoni]
Length = 214
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 125/207 (60%), Gaps = 15/207 (7%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
D K+LLIGD VGKSS+L I + D TIGVDFK+K + +G R+KL IWDTA
Sbjct: 13 DIHLKLLLIGDMNVGKSSLLFRYIDDGFSDTYMSTIGVDFKVKTVMIGNTRVKLQIWDTA 72
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TS+YYRGAHGII+VYDV +TF N+ W KE + Y+ ++ +ILVGNK
Sbjct: 73 GQERFRTITSTYYRGAHGIIIVYDVNDVKTFCNVEK-WVKEAQTYA-DEGVARILVGNKN 130
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
+ + + V + LA ++ CLF+E SAKN E+V Q ++ I+ +L + +AV
Sbjct: 131 ESEELKTVATCDAQRLAAKNSCLFIETSAKNDENVDQ-----MFYIITREALRLRLNAVQ 185
Query: 190 KNQILKQKEVQESARGG-------NCC 209
K Q +Q VQ + G CC
Sbjct: 186 KQQEAQQTVVQLTPISGLKSKQKLKCC 212
>gi|83595175|gb|ABC25044.1| RAS related GTP-binding protein RAB10 [Hydra vulgaris]
Length = 203
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 130/208 (62%), Gaps = 8/208 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YDY FK+LLIGDSGVGK+ +L ++ + TIG+DFKIK + V GK++KL
Sbjct: 1 MAKKAYDYLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVEVDGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T+ +TF N++ W + ++ +++ + ++
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAK-WLRNIDEHAS-EGVERM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSL-L 182
++GNK D + +R ++E+G +A+EH F E SAK+ V++ F L IL
Sbjct: 119 ILGNKCDMNDKRMASKEKGEGIAREHNIKFYETSAKDNICVEEAFMRLTQDILRKHQAGA 178
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCCS 210
Q A I K+ A+ NCCS
Sbjct: 179 TQDQATTGVVIPKENR----AKPANCCS 202
>gi|4293|emb|CAA25036.1| unnamed protein product [Saccharomyces cerevisiae]
gi|223830|prf||1001201A protein YP2
Length = 206
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 132/214 (61%), Gaps = 20/214 (9%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIG+SGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRG+HGII+VYDVT +E+F N +W +E++ Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATST-VLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL--- 182
GNK D +R V + A +K FLE SA ++ +V+ F + +I + S
Sbjct: 120 GNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKQSMSQQNLN 179
Query: 183 -------EQGSAVVKNQILKQKEVQESARGGNCC 209
++G+ +K Q L + GG CC
Sbjct: 180 ETTQKKEDKGNVNLKGQSL-------TNTGGGCC 206
>gi|85106728|ref|XP_962242.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|28923842|gb|EAA33006.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|336470991|gb|EGO59152.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2508]
gi|350292068|gb|EGZ73263.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2509]
Length = 205
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 116/171 (67%), Gaps = 5/171 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLT 64
N +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+KL
Sbjct: 4 NRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE ++T + KIL
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFANVEQHAT-EGVNKIL 120
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
+GNK D + +RAV++E+G LA E FLE SAK ++++ F L I
Sbjct: 121 IGNKCDWEEKRAVSKEQGQALADELGIPFLEVSAKANINIEEAFFSLANDI 171
>gi|34849826|gb|AAH58382.1| RAB2A, member RAS oncogene family [Mus musculus]
Length = 212
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEKAFINTAKEIYE 169
>gi|217841|dbj|BAA00832.1| small GTP-binding protein [Arabidopsis thaliana]
Length = 195
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 119/198 (60%), Gaps = 5/198 (2%)
Query: 14 FKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQE 72
FK+LLIGDSGVGKS +LL +S V TIGVDFKI+ + GK +KL IWDTAGQE
Sbjct: 1 FKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 60
Query: 73 RFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRD 132
RF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LVGNK D
Sbjct: 61 RFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNKSDLT 118
Query: 133 SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVKNQ 192
RA+ E A E F+E SAK+ +V+Q F + I E + G+
Sbjct: 119 ENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPPT 178
Query: 193 ILKQKEVQESARGGNCCS 210
+ Q Q A+ CCS
Sbjct: 179 V--QIRGQPVAQKNGCCS 194
>gi|47209142|emb|CAF90455.1| unnamed protein product [Tetraodon nigroviridis]
Length = 185
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 112/166 (67%), Gaps = 3/166 (1%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL + D TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADGAYTDSYISTIGVDFKIRTVDMDGKTVKLQIWDTA 60
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGI+LVYDVT + +F N+ +W E+E Y+ +D ++LVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIVLVYDVTEQASFDNV-RLWMDEIERYAC-EDVSRLLVGNKS 118
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
D +++ V LA K FLE SAKN+E+V++ F L I
Sbjct: 119 DLLAQKVVDAAAAQDLASCLKIPFLETSAKNSENVEKVFLTLASDI 164
>gi|24648682|ref|NP_732610.1| Rab1 [Drosophila melanogaster]
gi|194899532|ref|XP_001979313.1| GG14761 [Drosophila erecta]
gi|195355524|ref|XP_002044241.1| GM15089 [Drosophila sechellia]
gi|195498456|ref|XP_002096531.1| Rab1 [Drosophila yakuba]
gi|195569217|ref|XP_002102607.1| GD19996 [Drosophila simulans]
gi|2313033|dbj|BAA21705.1| rab1 [Drosophila melanogaster]
gi|7300727|gb|AAF55873.1| Rab1 [Drosophila melanogaster]
gi|190651016|gb|EDV48271.1| GG14761 [Drosophila erecta]
gi|194129542|gb|EDW51585.1| GM15089 [Drosophila sechellia]
gi|194182632|gb|EDW96243.1| Rab1 [Drosophila yakuba]
gi|194198534|gb|EDX12110.1| GD19996 [Drosophila simulans]
gi|209417952|gb|ACI46514.1| FI01544p [Drosophila melanogaster]
Length = 205
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 128/207 (61%), Gaps = 10/207 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +E+F N+ W +E+E Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVPSLL 182
GNK D +++ V A + FLE SAK+ +V+Q F + +I + PS
Sbjct: 123 GNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSA 182
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
++ VK + Q E+ + G CC
Sbjct: 183 TDNASKVK---IDQGRPVENTKSG-CC 205
>gi|395859792|ref|XP_003802215.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Otolemur
garnettii]
Length = 212
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|224104483|ref|XP_002313450.1| predicted protein [Populus trichocarpa]
gi|222849858|gb|EEE87405.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 128/206 (62%), Gaps = 10/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK ++V+Q F +D+ ++ + + E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFFSIARDIKQRLSDTDTKAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
A K + + +A+ CC
Sbjct: 190 --PATSKIHLDQASGAGPAAQKSACC 213
>gi|6517192|dbj|BAA87878.1| Drab2 [Drosophila melanogaster]
Length = 213
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D DS R V +EEG A+E+ +F+E SA+ +V++ F + +I E
Sbjct: 118 GNKSDLDSRREVKKEEGEAFARENGLVFMETSARTAANVEEAFINTAKEIYE 169
>gi|221116677|ref|XP_002157639.1| PREDICTED: ras-related protein Rab-8A-like [Hydra magnipapillata]
Length = 207
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 119/180 (66%), Gaps = 10/180 (5%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
+YDY FK+LLIGDSGVGK+ +L ++ + TIG+DFKI+ + + GK++KL IWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIDLDGKKIKLQIWD 63
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRGA GI+LVYD+T ++F N+ + W + +E ++ D K+++GN
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKN-WIRNIEEHAA-ADVEKMILGN 121
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-------LEVPS 180
K D + +R V+ E G LA +H F+E SAK + +V++ F L I LE P+
Sbjct: 122 KCDMNDKRQVSAERGQALAMDHNVKFMETSAKTSANVEEAFISLARDIKKKMDRKLESPN 181
>gi|213513554|ref|NP_001133505.1| ras-related protein Rab-2A [Salmo salar]
gi|197632081|gb|ACH70764.1| RAB2A, member RAS oncogene family [Salmo salar]
gi|209154270|gb|ACI33367.1| Ras-related protein Rab-2A [Salmo salar]
gi|223647330|gb|ACN10423.1| Ras-related protein Rab-2A [Salmo salar]
gi|223649324|gb|ACN11420.1| Ras-related protein Rab-2A [Salmo salar]
gi|223673215|gb|ACN12789.1| Ras-related protein Rab-2A [Salmo salar]
Length = 212
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|392876326|gb|AFM86995.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|320592964|gb|EFX05373.1| GTP-binding protein ypt1 [Grosmannia clavigera kw1407]
Length = 202
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 124/209 (59%), Gaps = 14/209 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V + A FLE SAKN +V+Q F + +I E G
Sbjct: 120 GNKSDMSEKKVVDYQVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQIKE-----RMG 174
Query: 186 SAVVKN-----QILKQKEVQESARGGNCC 209
S N Q+ V ++ GG CC
Sbjct: 175 STATNNTKPSVQVGAGHGVSNNSSGG-CC 202
>gi|351724389|ref|NP_001236800.1| uncharacterized protein LOC100499844 [Glycine max]
gi|255627067|gb|ACU13878.1| unknown [Glycine max]
Length = 216
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 129/212 (60%), Gaps = 21/212 (9%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F +D+ ++ + S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGN------CC 209
Q +K + ++A GG CC
Sbjct: 190 P-------QTIKINQPDQAASGGRPAQKSACC 214
>gi|427777947|gb|JAA54425.1| Putative rab8a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 209
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 117/165 (70%), Gaps = 5/165 (3%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIW 66
SYD+ FK+LLIGDSGVGK+SIL S++ D S TIG+DFKI+++ + GK++KL IW
Sbjct: 4 SYDFLFKLLLIGDSGVGKTSILFRF-SDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQIW 62
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+T++YYRGA GI+LVYDVT+ TF N+ + W + + ++ D K+++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTKEATFENIKT-WIRNTDEHAA-ADVEKMILG 120
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDL 171
NK D + R V++E G LA EH F+E SA ++ +V++ F L
Sbjct: 121 NKCDMNELRQVSKERGEKLAIEHNIKFMETSAVSSINVEEAFYTL 165
>gi|112983246|ref|NP_001037010.1| small GTP-binding protein [Bombyx mori]
gi|2338554|gb|AAB67169.1| small GTP-binding protein [Bombyx mori]
Length = 202
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 129/204 (63%), Gaps = 4/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +++F+N+ W +E++ Y+ + + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEIDRYACD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A++ FLE SAKN+ +V+Q F + +I G
Sbjct: 120 GNKCDLTTKKVVDFSTAKQYAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARVGPPSTG 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+A + + Q + ++ + +CC
Sbjct: 180 AAPAGHVKIDQGQPIDTGK-SSCC 202
>gi|15238542|ref|NP_200792.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
gi|9757904|dbj|BAB08351.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|28393504|gb|AAO42173.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|28973447|gb|AAO64048.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|332009857|gb|AED97240.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 129/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV + +G LA E+ F E SAK +V++ F KD+ ++ + S E
Sbjct: 130 ADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDSRAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + +Q + ++ + CC
Sbjct: 190 PATIKI-SQTDQAAGAGQATQKSACC 214
>gi|19115492|ref|NP_594580.1| GTPase Ypt2 [Schizosaccharomyces pombe 972h-]
gi|141305|sp|P17609.1|YPT2_SCHPO RecName: Full=GTP-binding protein ypt2; AltName: Full=SEC4 homolog
gi|5144|emb|CAA36707.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5150|emb|CAA37045.1| unnamed protein product [Schizosaccharomyces pombe]
gi|2414662|emb|CAB16405.1| GTPase Ypt2 [Schizosaccharomyces pombe]
Length = 200
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 117/169 (69%), Gaps = 5/169 (2%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIW 66
SYDY K+LLIGDSGVGKS +LL +S PS TIG+DFKI+ + + GKR+KL IW
Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRIKLQIW 63
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+T++YYRGA GI+L+YDVT +++F N+ + W VE +++ ++ KIL+G
Sbjct: 64 DTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRT-WFSNVEQHAS-ENVYKILIG 121
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
NK D + +R V+ E+G LA E FLE SAK +V + F L +I
Sbjct: 122 NKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>gi|66810383|ref|XP_638915.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208510|sp|P34139.2|RAB1A_DICDI RecName: Full=Ras-related protein Rab-1A
gi|60467471|gb|EAL65493.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 125/204 (61%), Gaps = 4/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N Y Y FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPDYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT + TF N+ W +E++ ++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQ-WLQEIDRFAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A + FLE SAK + +V+Q F + +I + +
Sbjct: 120 GNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPT 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
V KN+++ S + G CC
Sbjct: 180 QTVDKNKVVPGSSAPISPKSG-CC 202
>gi|313221470|emb|CBY32219.1| unnamed protein product [Oikopleura dioica]
gi|313230502|emb|CBY18718.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 110/163 (67%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFSDDTYSESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ESVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D +++ V A FLE SAKN +V+Q F
Sbjct: 120 GNKCDMTTKKVVDYTTAKEYADSLNIPFLETSAKNNTNVEQAF 162
>gi|387914838|gb|AFK11028.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|388506382|gb|AFK41257.1| unknown [Lotus japonicus]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 129/211 (61%), Gaps = 20/211 (9%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 13 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 72
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 73 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIKN-WIRNIEQHASD-NVNKILVGNK 130
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F +D+ K+ + S E
Sbjct: 131 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQKLADTDSRAE 190
Query: 184 QGSAVVKNQILKQKEVQESARGG-----NCC 209
Q ++ + SA GG +CC
Sbjct: 191 P-------QTIQINQPDASASGGQAAQKSCC 214
>gi|401424329|ref|XP_003876650.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492893|emb|CBZ28172.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 200
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 109/160 (68%), Gaps = 3/160 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ L + K +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYD T E+F N+ + W E+E Y++ ++ KILVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKT-WLSEIEKYAS-ENVNKILVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D +++ V + A FLE SAKN+ +V++ F
Sbjct: 123 CDLVTKKVVDTQMAKDFADSLGIPFLETSAKNSTNVEEAF 162
>gi|197127904|gb|ACH44402.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 217
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQER T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERLRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
>gi|405969917|gb|EKC34860.1| Ras-related protein Rab-1A [Crassostrea gigas]
Length = 205
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 115/166 (69%), Gaps = 3/166 (1%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT +E+F+N+ W +E++ Y++ ++ K+LVGNK
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFSNVKQ-WLQEIDRYAS-ENVNKLLVGNKS 126
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
D ++++ V A + FLE SAKN +V+Q F + +I
Sbjct: 127 DMETKKVVDYTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEI 172
>gi|402881745|ref|XP_003904425.1| PREDICTED: ras-related protein Rab-1B-like [Papio anubis]
Length = 201
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 124/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYY GAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFQTITSSYYLGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM---AAEIKKRMWPG 176
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+A + LK GG CC
Sbjct: 177 AASGGERPNLKIDSTPVKPAGGGCC 201
>gi|297297438|ref|XP_001096730.2| PREDICTED: ras-related protein Rab-2B-like [Macaca mulatta]
Length = 190
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 126/192 (65%), Gaps = 10/192 (5%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++ +S++ + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +S R V REEG A+EH +F+E SAK +V++ F + E+ ++QG
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAF---INTAKEIYRKIQQG 174
Query: 186 SAVVKNQILKQK 197
V N++ K +
Sbjct: 175 LFDVHNEVRKGR 186
>gi|10129780|emb|CAC08198.1| putative GTP-binding protein [Kluyveromyces lactis]
Length = 206
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 131/214 (61%), Gaps = 20/214 (9%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIG+SGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRG+HGII+VYDVT RE+F N +W +E++ +T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDRESF-NGVKMWLQEIDRIATST-VLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL--- 182
GNK D +R V + A +K FLE SA ++ +V+ F + +I E S
Sbjct: 120 GNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLN 179
Query: 183 -------EQGSAVVKNQILKQKEVQESARGGNCC 209
++G+ +K Q L + GG CC
Sbjct: 180 ETTQKKEDKGNVNLKGQSL-------TNTGGGCC 206
>gi|255719125|ref|XP_002555843.1| KLTH0G18788p [Lachancea thermotolerans]
gi|238937227|emb|CAR25406.1| KLTH0G18788p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 132/209 (63%), Gaps = 12/209 (5%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIGDSGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGDSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT ++F ++ +W +E++ Y+T +K++V
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDHDSFNDV-KMWLQEIDRYAT-AGVLKLMV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +R V + A + FLE SA ++ +V++ F + +I E S+ +Q
Sbjct: 120 GNKSDLQDKRMVEYDVAKEFADSLQIPFLETSALDSSNVEEAFLTMAKQIKE--SMAQQH 177
Query: 186 SAVVK-----NQILKQKEVQESARGGNCC 209
K N LK + + ++ G CC
Sbjct: 178 KDTGKKDDKANVNLKGQSLSNAS--GGCC 204
>gi|50287271|ref|XP_446065.1| hypothetical protein [Candida glabrata CBS 138]
gi|51701907|sp|O42819.1|SEC4_CANGA RecName: Full=Ras-related protein SEC4
gi|2959746|emb|CAA12071.1| putative SEC4 protein [Candida glabrata]
gi|49525372|emb|CAG58989.1| unnamed protein product [Candida glabrata]
Length = 215
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 117/178 (65%), Gaps = 6/178 (3%)
Query: 2 GSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGK 59
GS SYD KILLIGDSGVGKS +L+ + + + PS TIG+DFKIK + + GK
Sbjct: 9 GSSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFN-PSFITTIGIDFKIKTVDINGK 67
Query: 60 RLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQD 119
++KL +WDTAGQERF T+T++YYRGA GIILVYDVT TF N+ W K V ++ N +
Sbjct: 68 KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQ-WFKTVNEHA-NDE 125
Query: 120 CVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
+LVGNK D D+ R VT E+G LA+E F+E SAKN ++V + F L I E
Sbjct: 126 AQLLLVGNKSDMDT-RVVTYEQGEALAKELGLPFIESSAKNDDNVNEIFFTLARLIQE 182
>gi|295658803|ref|XP_002789961.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282044|gb|EEH37610.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 201
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 119/187 (63%), Gaps = 8/187 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICIVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + ++AV A FLE SAK+ +V+Q F + +I E G
Sbjct: 120 GNKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQIKE-----RMG 174
Query: 186 SAVVKNQ 192
+A V N+
Sbjct: 175 TATVNNK 181
>gi|358393423|gb|EHK42824.1| secretion related small GTPase SRG1 [Trichoderma atroviride IMI
206040]
Length = 205
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 115/171 (67%), Gaps = 5/171 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLT 64
N +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+KL
Sbjct: 6 NRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVKLQ 64
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + VE ++T + KIL
Sbjct: 65 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFANIRT-WFQNVEQHAT-EGVNKIL 122
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
+GNK D + +R V+ E+G LA E FLE SAK+ ++ Q F L I
Sbjct: 123 IGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSLAADI 173
>gi|353244337|emb|CCA75747.1| related to YPT-1 GTP-binding protein ypt1 [Piriformospora indica
DSM 11827]
Length = 227
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 113/167 (67%), Gaps = 3/167 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 29 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 88
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +TFTN+ W +E++ Y++ + K+LVGNK
Sbjct: 89 AGQERFRTITSSYYRGAHGIIVVYDVTDTDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGNK 146
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
D S++ V A + FLE SAKN +V+Q F + +I
Sbjct: 147 SDLTSKKVVEYTVAKEFADQLGIPFLETSAKNATNVEQAFLTMAKQI 193
>gi|403177656|ref|XP_003336121.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172961|gb|EFP91702.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 240
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 125/203 (61%), Gaps = 6/203 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ D TIGVDFKI+ + + GK +KL IWDT
Sbjct: 41 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKLQIWDT 100
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT ++TFTN+ W E++ Y+ + K+LVGNK
Sbjct: 101 AGQERFRTITSSYYRGAHGIIVVYDVTDQDTFTNVKQ-WLHEIDRYAC-EGVNKLLVGNK 158
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLEQGS 186
D ++ V A + FLE SAK+ +V+Q F + +I + + + GS
Sbjct: 159 SDLTQKKVVEYTVAKDFADQLTIPFLETSAKSATNVEQAFLTMAKQIKDRTGSTTVNTGS 218
Query: 187 AVVKNQILKQKEVQESARGGNCC 209
++ + VQ+ G CC
Sbjct: 219 NKATLKVGAGQNVQQQQSSG-CC 240
>gi|171689264|ref|XP_001909572.1| hypothetical protein [Podospora anserina S mat+]
gi|170944594|emb|CAP70705.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 123/209 (58%), Gaps = 13/209 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V + A FLE SAKN +V+Q F + +I E G
Sbjct: 120 GNKSDMADKKVVDYQVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE-----RMG 174
Query: 186 SAVVKNQILKQKEVQ-----ESARGGNCC 209
S++ N V + + G CC
Sbjct: 175 SSIATNNTKANVNVSPGQGVSNNQSGGCC 203
>gi|378734099|gb|EHY60558.1| GTP-binding protein ypt2 [Exophiala dermatitidis NIH/UT8656]
Length = 209
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 130/211 (61%), Gaps = 9/211 (4%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIDLDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT ++F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRT-WFANVEQHAS-EGVNK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE--VPS 180
IL+GNK D + +R V+ E+G LA E FLE SAK ++++ F L + + + S
Sbjct: 119 ILIGNKCDWEEKRVVSTEQGQALADELGIPFLEVSAKANINIEKAFYSLASDVKKRLIDS 178
Query: 181 LLEQGSAVVKNQI--LKQKEVQESARGGNCC 209
E G+A + + Q + GG CC
Sbjct: 179 SKETGAATGNQSAGGVNVAQNQGAGVGGKCC 209
>gi|385888878|gb|AFI98561.1| RabE1 [Nicotiana benthamiana]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 128/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V+Q F +D+ ++ + S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLADTDSKAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + NQ ++A+ CC
Sbjct: 190 PSTLKI-NQPDAGAGGSQAAQKSACC 214
>gi|154294011|ref|XP_001547449.1| secretion related Rab/GTPase [Botryotinia fuckeliana B05.10]
gi|347841066|emb|CCD55638.1| similar to GTP-binding protein [Botryotinia fuckeliana]
Length = 203
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 128/203 (63%), Gaps = 19/203 (9%)
Query: 6 GNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKL 63
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+KL
Sbjct: 3 GTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVKL 61
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T++YYRGA GI+LVYDVT +FTN+ + W VE ++T + KI
Sbjct: 62 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRT-WFSNVEQHAT-EGVNKI 119
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
L+GNK D + +R V+ E G LA E FLE SAK+ +V++ F L
Sbjct: 120 LIGNKCDWEDKRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSL------------ 167
Query: 184 QGSAVVKNQILKQKEVQESARGG 206
+A +K +I+ ++ ++A+ G
Sbjct: 168 --AADIKKRIVDTSKIDQAAQQG 188
>gi|296819571|ref|XP_002849869.1| GTP-binding protein SAS1 [Arthroderma otae CBS 113480]
gi|238840322|gb|EEQ29984.1| GTP-binding protein SAS1 [Arthroderma otae CBS 113480]
Length = 205
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 129/210 (61%), Gaps = 11/210 (5%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTINLDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYR A GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVP 179
IL+GNK D + +RAVT E+G LA E FLE SAKN +V + F L +I ++V
Sbjct: 119 ILIGNKCDGEEKRAVTVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDMDVS 178
Query: 180 SLLEQGSAVVKNQILKQKEVQESARGGNCC 209
+ GS V + + + G +CC
Sbjct: 179 KAEQAGSQGVN---IDNQNGTGGSLGKSCC 205
>gi|356558229|ref|XP_003547410.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 215
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 125/206 (60%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEQDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+R V +G LA E+ F E SAK +V++ F +D+ ++ + S E
Sbjct: 130 ADMDESKRVVPTSKGQALADEYGIKFFETSAKTDLNVEEVFFSIARDIKQRLADTDSKAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ NQ Q E A+ CC
Sbjct: 190 PAGIKIDNQ-KDQATAGEVAQKSACC 214
>gi|358385051|gb|EHK22648.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 203
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 115/171 (67%), Gaps = 5/171 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLT 64
N +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+KL
Sbjct: 4 NRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + VE ++T + KIL
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRT-WFQNVEQHAT-EGVNKIL 120
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
+GNK D + +R V+ E+G LA E FLE SAK+ ++ Q F L I
Sbjct: 121 IGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSLAADI 171
>gi|351723507|ref|NP_001238305.1| uncharacterized protein LOC100306147 [Glycine max]
gi|255627683|gb|ACU14186.1| unknown [Glycine max]
Length = 203
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 121/205 (59%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT ++F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEDSFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + R V+ + A + F+E SAK+ +V+ F + I + Q
Sbjct: 120 GNKSDLTANRVVSYDTAKEFADQIGIPFMETSAKDATNVEDAFMAMSAAIKN--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
SA Q Q + CCS
Sbjct: 178 SANNAKPPTVQIRGQPVGQKSGCCS 202
>gi|334312769|ref|XP_001374724.2| PREDICTED: ras-related protein Rab-1A-like [Monodelphis domestica]
Length = 257
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 130/208 (62%), Gaps = 6/208 (2%)
Query: 4 KVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLK 62
K+ +DY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +K
Sbjct: 54 KLRRRMHDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 113
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K
Sbjct: 114 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 171
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSL 181
+LVGNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 172 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 231
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S+ G CC
Sbjct: 232 ATAGGAEKSNVKIQSTPVKQSS--GGCC 257
>gi|307198018|gb|EFN79078.1| Ras-related protein Rab-1A [Harpegnathos saltator]
Length = 206
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 128/205 (62%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +ETF N+ W +E++ Y+ + + K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A + FLE SAKN +V+Q F + +I G
Sbjct: 123 GNKCDLHTKKVVDYTIAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSG 182
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
++ N++ ++ ES++ G CC
Sbjct: 183 ASDPANKVKIEHGRPIESSKSG-CC 206
>gi|357440489|ref|XP_003590522.1| Ras-like protein [Medicago truncatula]
gi|355479570|gb|AES60773.1| Ras-like protein [Medicago truncatula]
gi|388512621|gb|AFK44372.1| unknown [Medicago truncatula]
Length = 216
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 129/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V + F +D+ ++ E S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQRLAESDSKTE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + NQ + ++++ +CC
Sbjct: 190 PQTLKI-NQPDQGAGSAQASQTSSCC 214
>gi|367054838|ref|XP_003657797.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL 8126]
gi|347005063|gb|AEO71461.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL 8126]
Length = 203
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 123/209 (58%), Gaps = 13/209 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V A FLE SAKN +V+Q F + +I E G
Sbjct: 120 GNKSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE-----RMG 174
Query: 186 SAVVKNQILKQKEVQ-----ESARGGNCC 209
S++ N V +++ G CC
Sbjct: 175 SSIATNNTKANVNVSPGHGVSNSQSGGCC 203
>gi|334314630|ref|XP_001379530.2| PREDICTED: ras-related protein Rab-2B-like [Monodelphis domestica]
Length = 272
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 123/187 (65%), Gaps = 10/187 (5%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++ +S++ + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +S R V REEG A+EH +F+E SAK +V++ F + E+ ++QG
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTASNVEEAF---INTAKEIYRKIQQG 174
Query: 186 SAVVKNQ 192
V N+
Sbjct: 175 LFDVNNE 181
>gi|357123970|ref|XP_003563680.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 123/189 (65%), Gaps = 8/189 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKVLVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V+Q F +D+ ++ E S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGITFFETSAKTNLNVEQVFFSIARDIKQRLSESDSKPE 189
Query: 184 QGSAVVKNQ 192
G+ +K +
Sbjct: 190 GGTIKIKPE 198
>gi|196008991|ref|XP_002114361.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
gi|190583380|gb|EDV23451.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
Length = 205
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 122/186 (65%), Gaps = 4/186 (2%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
+YD FKILLIGDSGVGK+ IL ++ + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKILLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIELQGKKIKLQIWD 64
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T+SYYRGA GI+LVYD+T+R++F N++ W + ++ +++ +D KI++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDLTQRKSFENINK-WIRNIDEHAS-KDVEKIILGN 122
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL-EVPSLLEQGS 186
KVD +R V + E LA+ H F+E SAK ++ F L IL ++P Q S
Sbjct: 123 KVDEADKREVLKSEAEELARIHSIRFMETSAKTNINIDAAFLGLANDILNKMPGKRSQAS 182
Query: 187 AVVKNQ 192
+ Q
Sbjct: 183 ETISIQ 188
>gi|145242842|ref|XP_001393994.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|146324048|ref|XP_747911.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|238503355|ref|XP_002382911.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|317148453|ref|XP_001822783.2| GTP-binding protein ypt1 [Aspergillus oryzae RIB40]
gi|11558649|emb|CAC17833.1| secretion related GTPase (SrgB) [Aspergillus niger]
gi|129556349|gb|EAL85873.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|134078551|emb|CAK40472.1| secretion related GTPase srgB-Aspergillus niger
gi|159126164|gb|EDP51280.1| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus A1163]
gi|220691721|gb|EED48069.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|259481104|tpe|CBF74330.1| TPA: GTP-binding protein ypt1 (Broad) [Aspergillus nidulans FGSC
A4]
gi|391874458|gb|EIT83340.1| GTPase Rab1/YPT1, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 201
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 118/187 (63%), Gaps = 8/187 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + ++ V A FLE SAKN +V+Q F + +I E G
Sbjct: 120 GNKSDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE-----RMG 174
Query: 186 SAVVKNQ 192
+A V N+
Sbjct: 175 TATVNNK 181
>gi|159108309|ref|XP_001704426.1| Rab1a [Giardia lamblia ATCC 50803]
gi|10047431|gb|AAG12239.1|AF183936_1 guanine nucleotide-binding protein Rab1A [Giardia intestinalis]
gi|157432489|gb|EDO76752.1| Rab1a [Giardia lamblia ATCC 50803]
Length = 212
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 136/213 (63%), Gaps = 17/213 (7%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIW 66
+++Y FK+L+IGDSGVGKS++LL L + + + S TIGVDFK+K L + +KL IW
Sbjct: 5 NHEYLFKLLVIGDSGVGKSALLLRLC-DKIFNASYITTIGVDFKVKSLNIKDNTVKLQIW 63
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQE+F T+TS+YYRGAHGI++VYDVT RE+F N+ + W KE+ + + + VK ++G
Sbjct: 64 DTAGQEKFRTITSTYYRGAHGIMVVYDVTSRESFDNVKT-WLKEIA-NNASDNVVKYIIG 121
Query: 127 NKVD-RDSERA-----VTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K D RDS + V+ EEG A+E F+E S+K+ E+V+Q F DL +I+E
Sbjct: 122 SKKDLRDSAGSINASHVSTEEGRKFAEELGISFIETSSKSGENVEQAFVDLAVRIIETQG 181
Query: 181 LLEQGSAVVKNQI----LKQKEVQESARGGNCC 209
QG V N L ++ ++G CC
Sbjct: 182 TTAQGGGRVINNPAVVSLSDPATKKDSKG--CC 212
>gi|328784309|ref|XP_003250431.1| PREDICTED: hypothetical protein LOC409456 [Apis mellifera]
Length = 1867
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +ETF N+ W +E++ Y+ + + K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A + FLE SAKN +V+Q F + +I
Sbjct: 123 GNKCDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEI 172
>gi|340373098|ref|XP_003385079.1| PREDICTED: ras-related protein Rab-13-like [Amphimedon
queenslandica]
Length = 219
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 128/215 (59%), Gaps = 9/215 (4%)
Query: 3 SKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSV-HDPSPTIGVDFKIKLLTVGGKRL 61
++ + YD+ F++LL GDS VGK+ ++ N H TIG+DFK+KL T+ K++
Sbjct: 2 ARATDKKYDHLFQLLLCGDSSVGKTCLISRFADNEFRHTHINTIGIDFKLKLFTIRDKKI 61
Query: 62 KLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCV 121
++ IWDTAGQER+ TLT+ YYR A GIILVYD+TR ETF N++ W + +E + +
Sbjct: 62 RMQIWDTAGQERYETLTAQYYRKAQGIILVYDITREETFRNVTK-WLRNIEDHGVKGVKI 120
Query: 122 KILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL---EV 178
IL+GNKVD +SER ++ G LA +H F E SA +V + F +L +IL E
Sbjct: 121 -ILIGNKVDLESERKISTRHGQKLANQHNIKFFETSAWKDINVTEAFTELAEQILAKVES 179
Query: 179 PSLLEQGSAVVKNQILKQKEVQESA---RGGNCCS 210
++GS+ ++ +K E Q + G CCS
Sbjct: 180 GGGRDRGSSSIRESAIKLHEQQPTPATKSHGGCCS 214
>gi|38175435|dbj|BAC83185.2| putative ras-related protein [Oryza sativa Japonica Group]
gi|215737480|dbj|BAG96610.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737584|dbj|BAG96714.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767074|dbj|BAG99302.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 215
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 133/208 (63%), Gaps = 12/208 (5%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTI-GVDFKIKLLTVGGKRLKLTIWDT 68
+D+ K+LLIGDSGVGKS +LL ++ T G+DFK++ + + GKR+KL IWDT
Sbjct: 12 FDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKRVKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLEQ 184
VD D++R V+ +G LA E+ F E SAK ++V+Q F +D+ ++ E + +
Sbjct: 130 VDMDTKRVVSTAQGQKLADEYGMKFFETSAKTNQNVEQVFFTIARDIKQRLTETVAAAAE 189
Query: 185 GSAVVKNQILKQKEVQESA--RGGNCCS 210
+ QI +Q+ Q +A R CC+
Sbjct: 190 PPTI---QISRQEPDQAAASSRWSACCN 214
>gi|302413135|ref|XP_003004400.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|261356976|gb|EEY19404.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|346972547|gb|EGY15999.1| GTP-binding protein ypt1 [Verticillium dahliae VdLs.17]
Length = 202
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 121/204 (59%), Gaps = 4/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V A FLE SAKN +V+Q F + +I E
Sbjct: 120 GNKSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTAN 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
+ Q+ + V S GG CC
Sbjct: 180 NEKRSVQVGPGQNVSSSPSGG-CC 202
>gi|254583504|ref|XP_002497320.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
gi|238940213|emb|CAR28387.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
Length = 209
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 138/213 (64%), Gaps = 15/213 (7%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIG+SGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVDLDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRG+HGII+VYDVT +E+F N +W +E++ Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATST-VLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ- 184
GNK D +R V + A +K F+E SA ++ +V++ F + +I + S+ +Q
Sbjct: 120 GNKCDLKDKRVVEYDVAKEFADANKMPFIETSALDSTNVEEAFLTMARQIKD--SMAQQQ 177
Query: 185 ----GSAVVKNQ----ILKQKEVQESARGGNCC 209
G+A +N+ LK + + S+ G CC
Sbjct: 178 RHDGGAANGQNENGNVNLKGQSLTNSSANG-CC 209
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 119/169 (70%), Gaps = 3/169 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YD+ FK+LLIGDSGVGK+ +++ ++ + TIG+DFK+K + V GK++KL +WDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNYNTTYISTIGIDFKVKTIEVDGKKVKLQVWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GIILVYD+T ++F N+ + W K + + + ++L+GNK
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIR-ENASAGVTRMLLGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
D +++R V++E G LA+EH F E SAK++ +V++ F+ L IL+
Sbjct: 123 CDVEAKRKVSKETGETLAKEHAIRFFETSAKSSINVEESFQALARDILQ 171
>gi|390346096|ref|XP_781611.3| PREDICTED: ras-related protein Rab-1A isoform 2 [Strongylocentrotus
purpuratus]
Length = 212
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 125/203 (61%), Gaps = 8/203 (3%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 15 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVIKLQIWDTA 74
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LVGNK
Sbjct: 75 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 132
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLEQGSA 187
D +++ V A + + FLE SAKN +V+Q F + +I P + GS+
Sbjct: 133 DLTTKKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAEIKNRMGPGSVPSGSS 192
Query: 188 VVKNQILKQKEVQESARGGNCCS 210
K + G CCS
Sbjct: 193 HDK---INPSTTPVKPSGSGCCS 212
>gi|407927386|gb|EKG20280.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 208
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 115/173 (66%), Gaps = 5/173 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAT-EGVNK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
IL+GNK D + +RAV+ E+G LA E FLE SAK+ +V + F L I
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSLAADI 171
>gi|453083457|gb|EMF11503.1| GTP-binding protein SAS1 [Mycosphaerella populorum SO2202]
Length = 206
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 130/210 (61%), Gaps = 10/210 (4%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAT-EGVNK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
IL+GNK D + +RAV+ E+G LA E F+E SAK+ +V + F L I + ++
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFMEVSAKSNINVDKAFYSLAGDIKK--RIV 176
Query: 183 EQGSAVVKNQILKQKEVQESARGG---NCC 209
+ NQ Q+SA GG NCC
Sbjct: 177 DTQQPQQGNQQGVSVGGQQSAAGGLGKNCC 206
>gi|427787333|gb|JAA59118.1| Putative rab2a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 212
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D ++ R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLETRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYE 169
>gi|47211161|emb|CAF92536.1| unnamed protein product [Tetraodon nigroviridis]
Length = 247
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 115/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A FLE SAK++ +V+Q F + +I
Sbjct: 120 GNKCDLTTKKVVDYTTAKSFADNLGIPFLETSAKSSTNVEQAFMTMAAEI 169
>gi|345491599|ref|XP_001606644.2| PREDICTED: ras-related protein Rab-10-like [Nasonia vitripennis]
Length = 200
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 130/206 (63%), Gaps = 7/206 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ + W + ++ ++ N++ K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVN-WLRNIDEHA-NENVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
++GNK D + R V+ E G +A+EH F+E SAK ++ + F++L IL+ E
Sbjct: 119 ILGNKSDMEDRREVSTERGEAIAREHGIRFMETSAKANINIDRAFRELAEAILDKTHGKE 178
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
A +++ + V+ ++ CC
Sbjct: 179 PQDA--PDRVTVDRRVERTS--SRCC 200
>gi|325303716|tpg|DAA34556.1| TPA_exp: RAS oncogene family member RAB2 [Amblyomma variegatum]
Length = 212
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D ++ R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLETRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYE 169
>gi|67474604|ref|XP_653051.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|14423577|gb|AAK62471.1|AF389109_1 small GTP-binding protein Rab8 [Entamoeba histolytica]
gi|56469970|gb|EAL47665.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710651|gb|EMD49688.1| small GTP-binding protein Rab8, putative [Entamoeba histolytica
KU27]
Length = 199
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 123/201 (61%), Gaps = 8/201 (3%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIWDT 68
D + K+LLIG+SGVGKSS+LL S +P T+G+DF++K + + K+LKL IWDT
Sbjct: 5 DSTIKLLLIGESGVGKSSLLLRF-SEDAFNPMYITTVGIDFRVKNIELDNKKLKLQIWDT 63
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+ SSYYRG GI+LVYD+T RE+F N+ W + +E + +Q+ KILVGNK
Sbjct: 64 AGQERFRTIVSSYYRGVMGIVLVYDITSRESFNNI-EYWMRNIEA-NADQNVNKILVGNK 121
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D + +R VT EEG +A + FLE SAKN+ V CF L +++ + + S
Sbjct: 122 CDAEDKRVVTSEEGQQMANKLGIPFLETSAKNSLKVDDCFISLARDVIQ---RIGESSQS 178
Query: 189 VKNQILKQKEVQESARGGNCC 209
+ I+ + + CC
Sbjct: 179 AQPGIVDPTQQTQPTESTGCC 199
>gi|358058494|dbj|GAA95457.1| hypothetical protein E5Q_02111 [Mixia osmundae IAM 14324]
Length = 384
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 109/160 (68%), Gaps = 3/160 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YD FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + +GGK +KL IWDT
Sbjct: 138 YDLLFKLLLIGDSGVGKSCLLLRFADDSYSDSYISTIGVDFKIRTIELGGKTVKLQIWDT 197
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT ++TF+N+ W +E++ Y+ + K+LVGNK
Sbjct: 198 AGQERFRTITSSYYRGAHGIIVVYDVTDQDTFSNVKQ-WLQEIDRYAC-EGVDKLLVGNK 255
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D ++ V A + FLE SAKN +V+Q F
Sbjct: 256 SDLQQKKVVDYTVAKEFADQLAIPFLETSAKNATNVEQAF 295
>gi|255935933|ref|XP_002558993.1| Pc13g05590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583613|emb|CAP91628.1| Pc13g05590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|425777724|gb|EKV15880.1| Rab GTPase SrgA, putative [Penicillium digitatum PHI26]
gi|425782706|gb|EKV20602.1| Rab GTPase SrgA, putative [Penicillium digitatum Pd1]
Length = 206
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 116/173 (67%), Gaps = 5/173 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
IL+GNK D + +RAV+ E+G LA E FLE SAKN ++++ F L I
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYSLASDI 171
>gi|289739869|gb|ADD18682.1| Rab protein 1 [Glossina morsitans morsitans]
Length = 205
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 127/207 (61%), Gaps = 10/207 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + K +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDNKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +E+F N+ W +E+E Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVPSLL 182
GNK D +++ V A + FLE SAK+ +V+Q F + +I + PS
Sbjct: 123 GNKSDLTTKKVVDHTTAAEYANQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSA 182
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
++ VK + Q ES + G CC
Sbjct: 183 TDNTSKVK---IDQGRPVESTKSG-CC 205
>gi|407038762|gb|EKE39296.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 199
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 123/201 (61%), Gaps = 8/201 (3%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIWDT 68
D + K+LLIG+SGVGKSS+LL S +P T+G+DF++K + + K+LKL IWDT
Sbjct: 5 DSTIKLLLIGESGVGKSSLLLRF-SEDAFNPMYITTVGIDFRVKNIELDNKKLKLQIWDT 63
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+ SSYYRG GI+LVYD+T RE+F N+ W + +E + +Q+ KILVGNK
Sbjct: 64 AGQERFRTIVSSYYRGVMGIVLVYDITSRESFNNI-EYWMRNIEA-NADQNVNKILVGNK 121
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
D + +R VT EEG +A + FLE SAKN+ V CF L +++ + + S
Sbjct: 122 CDAEDKRVVTSEEGQQMANKLGIPFLETSAKNSLKVDDCFISLARDVIQ---RIGESSQS 178
Query: 189 VKNQILKQKEVQESARGGNCC 209
+ I+ + + CC
Sbjct: 179 AQPGIVDPTQQTQPTESTGCC 199
>gi|254570485|ref|XP_002492352.1| Secretory vesicle-associated Rab GTPase essential for exocytosis
[Komagataella pastoris GS115]
gi|12381851|emb|CAC24717.1| Sec4p [Komagataella pastoris]
gi|238032150|emb|CAY70093.1| Secretory vesicle-associated Rab GTPase essential for exocytosis
[Komagataella pastoris GS115]
gi|328353638|emb|CCA40036.1| Ras-related protein RIC1 [Komagataella pastoris CBS 7435]
Length = 204
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 119/178 (66%), Gaps = 5/178 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIWD 67
YD + K+LL+GDSGVGKS +LL + +S + PS TIG+DFKI+ + + GK++KL IWD
Sbjct: 11 YDLTMKLLLVGDSGVGKSCLLLRFVDDSFN-PSFITTIGIDFKIRTVEINGKKVKLQIWD 69
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRGA GIILVYDVT +F ++ + W + + ++ N+D LVGN
Sbjct: 70 TAGQERFRTITTAYYRGAMGIILVYDVTDERSFNSVHN-WYQTLNQHA-NEDAQLFLVGN 127
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
K D + R VT+E+G LA E FLE SAK+ ++V F +L + E +QG
Sbjct: 128 KCDDEESRQVTKEQGEQLASELGVPFLEASAKSNKNVDAIFLELAKRFEEKMRNTQQG 185
>gi|444317447|ref|XP_004179380.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS 6284]
gi|387512421|emb|CCH59861.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS 6284]
Length = 210
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 119/172 (69%), Gaps = 3/172 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSV-HDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIG+SGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYSNDYISTIGVDFKIKTIEIDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRG+HGII+VYDVT +++F N +W +E++ Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQDSF-NSVKMWLQEIDRYATSS-VLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +R V + A+ + FLE SA ++ +V++ F + +I E
Sbjct: 120 GNKSDLKDKRIVEYDVAKEFAETNNMPFLETSALDSTNVEEAFLTMAKQIKE 171
>gi|170592447|ref|XP_001900976.1| Rab family protein 8 [Brugia malayi]
gi|158591043|gb|EDP29656.1| Rab family protein 8, putative [Brugia malayi]
Length = 237
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
SYDY FK+LLIGDSGVGK+ +L +S ++ TIG+DFKI+ + + GK++KL IWD
Sbjct: 4 SYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRGA GI+LVYD+T ++F N+ + W + +E ++++ D ++++GN
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVDRMIIGN 121
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
K D + R V+RE G LA E+ F+E SAK +V++ F L I
Sbjct: 122 KCDIEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDI 169
>gi|284055664|pdb|3JZA|A Chain A, Crystal Structure Of Human Rab1b In Complex With The Gef
Domain Of DrraSIDM FROM LEGIONELLA PNEUMOPHILA
gi|302148858|pdb|3NKV|A Chain A, Crystal Structure Of Rab1b Covalently Modified With Amp At
Y77
gi|302148859|pdb|3NKV|B Chain B, Crystal Structure Of Rab1b Covalently Modified With Amp At
Y77
gi|442570813|pdb|4HLQ|B Chain B, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570815|pdb|4HLQ|D Chain D, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570817|pdb|4HLQ|F Chain F, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570819|pdb|4HLQ|H Chain H, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570821|pdb|4HLQ|J Chain J, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
Length = 175
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 113/167 (67%), Gaps = 3/167 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 124 SDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 170
>gi|403072070|pdb|4FMC|B Chain B, Espg-Rab1 Complex
gi|403072072|pdb|4FMC|D Chain D, Espg-Rab1 Complex
gi|403072076|pdb|4FMD|B Chain B, Espg-Rab1 Complex Structure At 3.05 A
gi|403072078|pdb|4FMD|D Chain D, Espg-Rab1 Complex Structure At 3.05 A
gi|403072082|pdb|4FME|B Chain B, Espg-Rab1-Arf6 Complex
gi|403072085|pdb|4FME|E Chain E, Espg-Rab1-Arf6 Complex
Length = 171
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 113/167 (67%), Gaps = 3/167 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 3 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 62
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LVGNK
Sbjct: 63 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 120
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 121 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 167
>gi|26335369|dbj|BAC31385.1| unnamed protein product [Mus musculus]
Length = 168
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 113/163 (69%), Gaps = 7/163 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D +S R V +EEG A+EH +F+E SAK +V++ F
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|442755463|gb|JAA69891.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 253
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 112/170 (65%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+ YDVT +E+F N+ W +E++ Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 123 GNKSDLTTKKVVDYTTAKEFADHLNIPFLETSAKNATNVEQAFMTMAAEI 172
>gi|123444682|ref|XP_001311109.1| Ras-like GTP-binding protein YPT1 [Trichomonas vaginalis G3]
gi|62736240|gb|AAX97449.1| small Rab GTPase Rab1b [Trichomonas vaginalis]
gi|121892906|gb|EAX98179.1| Ras-like GTP-binding protein YPT1, putative [Trichomonas vaginalis
G3]
Length = 203
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 110/160 (68%), Gaps = 3/160 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
+D FK+LLIGDSG GKS +L+ N D TIGVDFKIK + V GK +K+ +WDT
Sbjct: 6 FDLLFKVLLIGDSGTGKSCLLIRFAENIFSDNYISTIGVDFKIKTINVDGKTIKMQVWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T+SYYRG++GIILVYDVT R++F ++ + W KE++ + D +++VGNK
Sbjct: 66 AGQERFRTITASYYRGSNGIILVYDVTNRDSFDHI-NYWMKEIDRLAA-PDVCRLIVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D +R VT EEG LAQ++ FLE SA +V++ F
Sbjct: 124 SDLSDKRVVTTEEGQSLAQQYGVSFLETSALGNANVEEMF 163
>gi|320590560|gb|EFX03003.1| rab GTPase [Grosmannia clavigera kw1407]
Length = 205
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 127/211 (60%), Gaps = 13/211 (6%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
GN +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAT-EGVNK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEV 178
IL+GNK D + +R ++ E G LA E FLE SAK+ ++ + F D+ +I++
Sbjct: 119 ILIGNKCDWEEKRVISTERGQQLADELGIPFLEVSAKSGINIDKAFYNLASDIKTRIVDT 178
Query: 179 PSLLEQGSAVVKNQILKQKEVQESARGGNCC 209
+ SA V + GG CC
Sbjct: 179 AKTEQTASAGVN----VNSSGDSNGLGGKCC 205
>gi|70982277|ref|XP_746667.1| Rab GTPase SrgA [Aspergillus fumigatus Af293]
gi|119486547|ref|XP_001262318.1| Rab GTPase SrgA, putative [Neosartorya fischeri NRRL 181]
gi|66844290|gb|EAL84629.1| Rab GTPase SrgA, putative [Aspergillus fumigatus Af293]
gi|119410475|gb|EAW20421.1| Rab GTPase SrgA, putative [Neosartorya fischeri NRRL 181]
gi|159122097|gb|EDP47219.1| Rab GTPase SrgA, putative [Aspergillus fumigatus A1163]
Length = 206
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 116/173 (67%), Gaps = 5/173 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSF-TPSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
IL+GNK D + +RAV+ E+G LA E FLE SAKN ++++ F L I
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYSLASAI 171
>gi|357613677|gb|EHJ68649.1| ras-related protein Rab-2A [Danaus plexippus]
Length = 212
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYE 169
>gi|21311975|ref|NP_080953.1| ras-related protein Rab-13 [Mus musculus]
gi|46577121|sp|Q9DD03.1|RAB13_MOUSE RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|12832187|dbj|BAB22000.1| unnamed protein product [Mus musculus]
gi|20070865|gb|AAH27214.1| RAB13, member RAS oncogene family [Mus musculus]
gi|148683212|gb|EDL15159.1| RAB13, member RAS oncogene family [Mus musculus]
Length = 202
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 118/169 (69%), Gaps = 3/169 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
+YD+ FK+LLIGDSGVGK+ +++ ++ + TIG+DFKI+ + + GKR+KL +WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWD 63
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRGA GIILVYD+T ++F N+ + W K ++ + + ++L+GN
Sbjct: 64 TAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLGN 121
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL 176
K D +++R V RE+ LA+EH+ F E SAK++ +V + F L IL
Sbjct: 122 KCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDIL 170
>gi|395502994|ref|XP_003755858.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Sarcophilus
harrisii]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 123/187 (65%), Gaps = 10/187 (5%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++ +S++ + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +S R V REEG A+EH +F+E SAK +V++ F + E+ ++QG
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTASNVEEAF---INTAKEIYRKIQQG 174
Query: 186 SAVVKNQ 192
V N+
Sbjct: 175 LFDVNNE 181
>gi|295671891|ref|XP_002796492.1| GTP-binding protein SAS1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283472|gb|EEH39038.1| GTP-binding protein SAS1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 206
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 117/176 (66%), Gaps = 5/176 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSF-TPSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV 178
+L+GNK D + +RAV+ E+G LA E FLE SAKN +V++ F L I V
Sbjct: 119 MLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKRV 174
>gi|225681353|gb|EEH19637.1| GTP-binding protein SAS1 [Paracoccidioides brasiliensis Pb03]
gi|226288481|gb|EEH43993.1| GTP-binding protein SAS1 [Paracoccidioides brasiliensis Pb18]
Length = 206
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 117/176 (66%), Gaps = 5/176 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSF-TPSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAS-EGVHK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV 178
+L+GNK D + +RAV+ E+G LA E FLE SAKN +V++ F L I V
Sbjct: 119 MLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKRV 174
>gi|356499659|ref|XP_003518654.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 127/208 (61%), Gaps = 13/208 (6%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
D D S+RAV +G LA E+ F E SAK +V++ F + ++ L +
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIAR---DIKQRLADTDS 186
Query: 188 VVKNQILKQKEVQESARGG------NCC 209
+ Q +K + ++A GG CC
Sbjct: 187 KAEPQTIKINQPDQAATGGLAAQKSACC 214
>gi|356568975|ref|XP_003552683.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 127/208 (61%), Gaps = 13/208 (6%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
D D S+RAV +G LA E+ F E SAK +V++ F + ++ L +
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIAR---DIKQRLADTDS 186
Query: 188 VVKNQILKQKEVQESARGG------NCC 209
+ Q +K + ++A GG CC
Sbjct: 187 KAEPQTIKINQPDQTATGGLAAQKSACC 214
>gi|297796937|ref|XP_002866353.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
gi|297312188|gb|EFH42612.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 128/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV + +G LA E+ F E SAK +V++ F KD+ ++ + S E
Sbjct: 130 ADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDSRAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + +Q + ++ CC
Sbjct: 190 PATIKI-SQTDQAAGAGQATHKSACC 214
>gi|442570869|pdb|4I1O|A Chain A, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570871|pdb|4I1O|C Chain C, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570873|pdb|4I1O|E Chain E, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570875|pdb|4I1O|G Chain G, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
Length = 181
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 113/167 (67%), Gaps = 3/167 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 124 SDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 170
>gi|449279645|gb|EMC87180.1| Ras-related protein Rab-1A, partial [Columba livia]
Length = 197
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 127/201 (63%), Gaps = 6/201 (2%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 118
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQGSAV 188
D +++ V A FLE SAKN +V+Q F + +I + + G A
Sbjct: 119 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 178
Query: 189 VKNQILKQKEVQESARGGNCC 209
N ++ V++S+ G CC
Sbjct: 179 KSNVKIQSTPVKQSS--GGCC 197
>gi|29789271|ref|NP_112354.1| ras-related protein Rab-13 [Rattus norvegicus]
gi|46577668|sp|P35286.2|RAB13_RAT RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|21952483|gb|AAM82588.1|AF525280_1 GTP-binding protein RAB13 [Rattus norvegicus]
gi|149048004|gb|EDM00580.1| RAB13, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 203
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 118/169 (69%), Gaps = 3/169 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
+YD+ FK+LLIGDSGVGK+ +++ ++ + TIG+DFKI+ + + GKR+KL +WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWD 63
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRGA GIILVYD+T ++F N+ + W K ++ + + ++L+GN
Sbjct: 64 TAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLGN 121
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL 176
K D +++R V RE+ LA+EH+ F E SAK++ +V + F L IL
Sbjct: 122 KCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDIL 170
>gi|170592039|ref|XP_001900777.1| Ras-related protein Rab-35 [Brugia malayi]
gi|158591929|gb|EDP30532.1| Ras-related protein Rab-35, putative [Brugia malayi]
Length = 209
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 134/222 (60%), Gaps = 25/222 (11%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSP----TIGVDFKIKLLTV 56
M + G YD+ FK+L+IGDSGVGKSS+LL N+ SP TIGVDFKI+ +T+
Sbjct: 1 MSAASGPRDYDHLFKLLIIGDSGVGKSSLLLRFADNTF---SPNYITTIGVDFKIRTVTI 57
Query: 57 GGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYST 116
G+R+KL IWDTAGQERF T+TS+YYRG HG+I+VY+VT ++F+N+ W E++ T
Sbjct: 58 NGQRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKR-WLHEID---T 113
Query: 117 N-QDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
N ++ K+LVGNK D R V + A+ K F E SAK +V++ F + +
Sbjct: 114 NCENVQKVLVGNKADDPERRVVLEVDARRFAETMKIPFFETSAKENINVEEMFNCITRLV 173
Query: 176 LEV------PSLLEQGSAV-VKNQILKQKEVQESARGGNCCS 210
LE ++ + GS V + IL++ E ++ CCS
Sbjct: 174 LEAKLRAPQTNIADSGSGVRLGGSILRRHEKRK------CCS 209
>gi|32398960|emb|CAD98425.1| rab1a protein, probable [Cryptosporidium parvum]
Length = 213
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 114/177 (64%), Gaps = 5/177 (2%)
Query: 3 SKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKR 60
S V YD+ FK++LIGDSGVGKS +LL + S TIGVDF+ + + + K
Sbjct: 2 SAVRQKEYDFLFKLVLIGDSGVGKSCLLLRFAQDDSFTDSYITTIGVDFRFRTIKIDDKI 61
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
+KL IWDTAGQERF T+TS+YYRGA G++LVYD T +F ++ W EV Y+T D
Sbjct: 62 IKLQIWDTAGQERFRTITSAYYRGADGVVLVYDTTSTSSFDHIDE-WVTEVNRYTT--DS 118
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
KIL+GNK D S++ V G AQE + F+E SAKN+ +V++CF ++ K+LE
Sbjct: 119 TKILIGNKCDLTSQKMVDFATGQKKAQELQVDFMESSAKNSTNVEECFVNIARKLLE 175
>gi|125773595|ref|XP_001358056.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|195166166|ref|XP_002023906.1| GL27164 [Drosophila persimilis]
gi|54637791|gb|EAL27193.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|194106066|gb|EDW28109.1| GL27164 [Drosophila persimilis]
Length = 205
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 129/207 (62%), Gaps = 10/207 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +E+F N+ W +E+E Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVPSLL 182
GNK D +++ V A + FLE SAK+ +V+Q F + +I + PS
Sbjct: 123 GNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSA 182
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCC 209
++ VK I + + V++ G CC
Sbjct: 183 TDNASKVK--IDQGRPVEKPNSG--CC 205
>gi|452839356|gb|EME41295.1| hypothetical protein DOTSEDRAFT_73639 [Dothistroma septosporum
NZE10]
Length = 207
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 116/169 (68%), Gaps = 5/169 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT ++F N+ + W VE ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRT-WFSNVEQHAT-EGVNK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDL 171
IL+GNK D + +RAV+ E+G LA E F+E SAK+ +V++ F L
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFMEVSAKSNINVEKAFYSL 167
>gi|13929006|ref|NP_113906.1| ras-related protein Rab-2A [Rattus norvegicus]
gi|131789|sp|P05712.1|RAB2A_RAT RecName: Full=Ras-related protein Rab-2A
gi|206555|gb|AAA42007.1| ras protein [Rattus norvegicus]
Length = 212
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD T+GV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TMGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|302766964|ref|XP_002966902.1| rab family GTPase [Selaginella moellendorffii]
gi|300164893|gb|EFJ31501.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 112/161 (69%), Gaps = 4/161 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
+DY K+LLIGDSGVGKS +LL +S TIG+DFKI+ + + G+R+KL +WDT
Sbjct: 13 HDYRIKLLLIGDSGVGKSCVLLRFSDDSFTTSFITTIGIDFKIRTIELDGRRVKLQVWDT 72
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GIILVYDVT +F N+ + W K +E + +++ ++LVGNK
Sbjct: 73 AGQERFRTITTAYYRGAMGIILVYDVTDESSFNNIRN-WVKNIE-QNASENVSRVLVGNK 130
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D D S+RAVT +G LA E+ F E SAK ++V++ F
Sbjct: 131 ADMDESKRAVTTAQGQALANEYGIRFFETSAKTGQNVEETF 171
>gi|449440016|ref|XP_004137781.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 128/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F KD+ ++ + S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLSDSDSKSE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + NQ ++A+ CC
Sbjct: 190 PQTIKI-NQADNGAGASQTAQKSACC 214
>gi|428179155|gb|EKX48027.1| hypothetical protein GUITHDRAFT_93719 [Guillardia theta CCMP2712]
Length = 214
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 131/205 (63%), Gaps = 10/205 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTIWD 67
SYDY K++LIGDSGVGKSS+LL +S + +PTIG+DFK++ + + GK++KL + D
Sbjct: 11 SYDYLIKLMLIGDSGVGKSSLLLRFSDDSFDMNCTPTIGIDFKLRTIELDGKKIKLQLLD 70
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T+++YR A GI+LVYD+T ++F N+ W K +E + T+Q KIL+GN
Sbjct: 71 TAGQERFKTITTAHYRNAMGILLVYDITNEQSFKNIEE-WLKNIEKH-TSQPVNKILIGN 128
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
K D ++R V+ EEG LA++ F E SAK+ V + F +D+ ++ E P +
Sbjct: 129 KTDLGAQRKVSTEEGRKLAEQLNMAFYETSAKDKSMVDEAFFALTRDIKKRLGEHPGPNK 188
Query: 184 QGSAVVKNQILKQKEVQESARGGNC 208
V Q+ KQ+E + + +C
Sbjct: 189 STGTV---QVSKQEESSSAGKKKSC 210
>gi|401623107|gb|EJS41224.1| sec4p [Saccharomyces arboricola H-6]
Length = 215
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 115/171 (67%), Gaps = 6/171 (3%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIW 66
SYD KILLIGDSGVGKS +L+ + + + PS TIG+DFKIK + + GK++KL +W
Sbjct: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFN-PSFITTIGIDFKIKTVDINGKKVKLQLW 74
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+T++YYRGA GIILVYDVT TFTN+ W K V ++ N + +LVG
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-NDEAQLLLVG 132
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
NK D D+ R VT ++G LA+E F+E SAKN +V + F L I E
Sbjct: 133 NKSDMDT-RVVTADQGEALAKELGIPFIESSAKNDNNVNEIFFTLAKLIQE 182
>gi|112292985|dbj|BAF02870.1| Rab13 [Mus musculus]
Length = 202
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 118/169 (69%), Gaps = 3/169 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
+YD+ FK+LLIGDSGVGK+ +++ ++ + TIG+DFKI+ + + GKR+KL +WD
Sbjct: 4 AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWD 63
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRGA GIILVYD+T ++F N+ + W K ++ + + ++L+GN
Sbjct: 64 TAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLGN 121
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL 176
K D +++R V RE+ LA+EH+ F E SAK++ +V + F L IL
Sbjct: 122 KCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDIL 170
>gi|324521795|gb|ADY47928.1| Ras-related protein Rab-8B [Ascaris suum]
Length = 223
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 115/161 (71%), Gaps = 3/161 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
+YDY FK+LLIGDSGVGK+ +L +S ++ TIG+DFKI+ + V GK++KL IWD
Sbjct: 18 TYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIEVDGKKIKLQIWD 77
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRGA GI+LVYD+T ++F N+ + W + +E ++++ D ++++GN
Sbjct: 78 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVDRMIIGN 135
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
K D + R V+RE G LA E+ FLE SAK +V++ F
Sbjct: 136 KCDVEERRQVSRERGEQLAIEYGTKFLETSAKANINVEEAF 176
>gi|302755370|ref|XP_002961109.1| rab family GTPase [Selaginella moellendorffii]
gi|300172048|gb|EFJ38648.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 112/161 (69%), Gaps = 4/161 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
+DY K+LLIGDSGVGKS +LL +S TIG+DFKI+ + + G+R+KL +WDT
Sbjct: 13 HDYRIKLLLIGDSGVGKSCVLLRFSDDSFTTSFITTIGIDFKIRTIELDGRRVKLQVWDT 72
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GIILVYDVT +F N+ + W K +E + +++ ++LVGNK
Sbjct: 73 AGQERFRTITTAYYRGAMGIILVYDVTDESSFNNIRN-WVKNIE-QNASENVSRVLVGNK 130
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D D S+RAVT +G LA E+ F E SAK ++V++ F
Sbjct: 131 ADMDESKRAVTTAQGQALANEYGIRFFETSAKTGQNVEETF 171
>gi|432091097|gb|ELK24309.1| Ras-related protein Rab-1B [Myotis davidii]
Length = 212
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 123/201 (61%), Gaps = 7/201 (3%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 17 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 76
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LVGNK
Sbjct: 77 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNKS 134
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D +++ V A FLE SAKN +V+Q F + E+ + G+A
Sbjct: 135 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM---AAEIKKRMGPGAATG 191
Query: 190 KNQI-LKQKEVQESARGGNCC 209
+ LK GG CC
Sbjct: 192 GERPNLKIDSTPVKPAGGGCC 212
>gi|310792151|gb|EFQ27678.1| Ras family protein [Glomerella graminicola M1.001]
Length = 202
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 127/211 (60%), Gaps = 20/211 (9%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLT 64
N +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+KL
Sbjct: 4 NRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE ++T + KIL
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFANVEQHAT-EGVNKIL 120
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
+GNK D + +R V+ E G LA E FLE SAK+ ++ + F L I +
Sbjct: 121 IGNKCDWEEKRVVSTERGQQLADELGIPFLEVSAKSNINIDKAFYSLAADIKK------- 173
Query: 185 GSAVVKNQILKQKEV------QESARGGNCC 209
++ NQ +Q ++S GG CC
Sbjct: 174 --RLIDNQKNEQPAASGVNVGEQSGAGGKCC 202
>gi|358341770|dbj|GAA49364.1| Ras-related protein Rab-35 [Clonorchis sinensis]
Length = 226
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 123/218 (56%), Gaps = 21/218 (9%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
D K+LLIGD GVGKSS+LL I N TIGVDFK+K + VGG R+KL IWDTA
Sbjct: 10 DVVLKLLLIGDMGVGKSSLLLRYIDNDFSATYISTIGVDFKVKTIMVGGLRVKLQIWDTA 69
Query: 70 GQERFGTLTS----------------SYYRGAHGIILVYDVTRRETFTNLSSVWAKEVEL 113
GQ+RF T+TS SYYRGAHGII+VYDV TF N+ W +E +
Sbjct: 70 GQDRFRTITSTWVSLFTCFIVSLPIDSYYRGAHGIIIVYDVNDVRTFCNVER-WTQEASM 128
Query: 114 YSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLY 173
Y T+ +ILVGNK D + + V + LA +H CLF+E SAK+ E+V Q F +
Sbjct: 129 Y-TDDSIARILVGNKNDTPALKTVAAHDAQRLAAKHSCLFIETSAKSDENVDQMFDMITR 187
Query: 174 KILEVPSLL--EQGSAVVKNQILKQKEVQESARGGNCC 209
+ L + L +Q +A+ + L+ + NCC
Sbjct: 188 EALRLRLQLASQQCNAMPNSITLRPVAAAPPEKRRNCC 225
>gi|15231847|ref|NP_190929.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|30693873|ref|NP_850696.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|145332825|ref|NP_001078278.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|297820096|ref|XP_002877931.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|75098184|sp|O24466.1|RAE1A_ARATH RecName: Full=Ras-related protein RABE1a; Short=AtRABE1a; AltName:
Full=Ras-related protein Rab8B; Short=AtRab8B
gi|2289961|gb|AAB65088.1| AtRAB8 [Arabidopsis thaliana]
gi|6729512|emb|CAB67668.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|21555222|gb|AAM63807.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|28466873|gb|AAO44045.1| At3g53610 [Arabidopsis thaliana]
gi|110736141|dbj|BAF00042.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|110740068|dbj|BAF01936.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|297323769|gb|EFH54190.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|332645595|gb|AEE79116.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645596|gb|AEE79117.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645597|gb|AEE79118.1| RAB GTPase-8 [Arabidopsis thaliana]
Length = 216
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 128/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASDS-VNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV + +G LA E+ F E SAK +V++ F KD+ ++ + + E
Sbjct: 130 ADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + NQ + ++ + CC
Sbjct: 190 PQTIKI-NQSDQGAGTSQATQKSACC 214
>gi|310794670|gb|EFQ30131.1| Ras family protein [Glomerella graminicola M1.001]
gi|380490830|emb|CCF35739.1| GTP-binding protein ypt1 [Colletotrichum higginsianum]
Length = 202
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 122/211 (57%), Gaps = 18/211 (8%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V A FLE SAKN +V+Q F + +I E G
Sbjct: 120 GNKSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE-----RMG 174
Query: 186 SAVVKNQILKQKEVQ-------ESARGGNCC 209
S N + VQ S GG CC
Sbjct: 175 STTANNT---KPSVQVGPGHGVSSNSGGGCC 202
>gi|388499182|gb|AFK37657.1| unknown [Lotus japonicus]
Length = 203
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 121/205 (59%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+ LIGDSGVGKS +LL +S + TIGVDFKI+ + K +KL I
Sbjct: 2 NPEYDYLFKLFLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
G+K D + RAV+ + A + F+E SAK+ +V+Q F + I + Q
Sbjct: 120 GSKCDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEQAFMAMSASIKN--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
SA Q Q + CCS
Sbjct: 178 SANNGRPPTVQIRGQPVGQKSGCCS 202
>gi|340720307|ref|XP_003398582.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Bombus
terrestris]
Length = 200
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 116/174 (66%), Gaps = 3/174 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
++GNK D + +R V+ G +A+EH F+E SAK ++ + F +L ILE
Sbjct: 119 ILGNKSDMEDKRVVSTARGEAIAREHGIRFMETSAKADINIDRAFNELTEAILE 172
>gi|261190448|ref|XP_002621633.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis SLH14081]
gi|239591056|gb|EEQ73637.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis SLH14081]
gi|239614972|gb|EEQ91959.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis ER-3]
Length = 221
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 129/210 (61%), Gaps = 12/210 (5%)
Query: 4 KVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLK 62
KVG YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +K
Sbjct: 20 KVGQG-YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVK 78
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K
Sbjct: 79 LQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNK 136
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
+LVGNK D + ++AV A FLE SAK+ +V+Q F + +I E
Sbjct: 137 LLVGNKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQIKE----- 191
Query: 183 EQGSAVVKNQ---ILKQKEVQESARGGNCC 209
G+A V N+ + Q + +S G CC
Sbjct: 192 RMGTATVNNKPTVQVGQGQGVQSGSAGGCC 221
>gi|242047780|ref|XP_002461636.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
gi|241925013|gb|EER98157.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
Length = 216
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 131/206 (63%), Gaps = 7/206 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTI-GVDFKIKLLTVGGKRLKLTIWDT 68
YD+ K+LLIGDSGVGKS +LL ++ T G+DFK++ + + GKR+KL IWDT
Sbjct: 12 YDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKRVKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLEQ 184
VD D++R V+ +G LA E+ F E SAK ++V+Q F +D+ ++ E + +
Sbjct: 130 VDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNQNVEQVFFTMARDIKQRLTETVAAATE 189
Query: 185 GSAVVKNQILKQKEVQESARGGNCCS 210
+ ++ + S+R +CC+
Sbjct: 190 PPTIQISRPDPDQAGTASSRWSSCCN 215
>gi|1370190|emb|CAA98172.1| RAB8A [Lotus japonicus]
Length = 216
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 129/211 (61%), Gaps = 20/211 (9%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 13 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 72
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 73 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIKN-WIRNIEQHASD-NVNKILVGNK 130
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F +D+ ++ + S E
Sbjct: 131 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 190
Query: 184 QGSAVVKNQILKQKEVQESARGG-----NCC 209
Q ++ + SA GG +CC
Sbjct: 191 P-------QTIQINQPDASASGGQAAQKSCC 214
>gi|116793841|gb|ABK26899.1| unknown [Picea sitchensis]
gi|224286684|gb|ACN41045.1| unknown [Picea sitchensis]
Length = 203
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 126/208 (60%), Gaps = 17/208 (8%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LL+GDS VGKS +LL +S + TIGVDFKIK + + GK +K IWDT
Sbjct: 6 YDYLFKVLLVGDSSVGKSCLLLRFTEDSYMESYISTIGVDFKIKTVELDGKTIKFQIWDT 65
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYD+T ++F ++ W E+E Y T+ + ILVGNK
Sbjct: 66 AGQERFKTVTSSYYRGAHGIIIVYDITDMDSFDHVKH-WLTEIERY-TSDNVNMILVGNK 123
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE------VPSLL 182
D +RAV ++ A + FLE SAK+ +V+Q F + +I + +
Sbjct: 124 CDLAEKRAVEQQMAKAFANDVGIPFLETSAKDATNVEQAFLTMAREIKKRVGGQTTSNNS 183
Query: 183 EQGSAVVKNQILKQKEVQESARGGNCCS 210
+ G+ +K + L+QK NCCS
Sbjct: 184 QIGTVQMKGKPLQQK--------NNCCS 203
>gi|324529832|gb|ADY49047.1| Ras-related protein Rab-2, partial [Ascaris suum]
Length = 212
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 115/170 (67%), Gaps = 7/170 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ K++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDSKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L+S W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTS-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ R V +EEG A+EH +F+E SAK +V++ F D +I
Sbjct: 118 GNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEI 167
>gi|193615541|ref|XP_001951463.1| PREDICTED: ras-related protein Rab-10-like [Acyrthosiphon pisum]
Length = 200
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 115/173 (66%), Gaps = 3/173 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + + ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNINEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL 176
++GNK D D +R V + G +A+EH FLE SAK ++++ F DL IL
Sbjct: 119 ILGNKCDMDDKRVVGKSRGEGIAREHNISFLETSAKANINIEKAFTDLTLSIL 171
>gi|392878122|gb|AFM87893.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 116/172 (67%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVKFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|871510|emb|CAA90080.1| small GTP-binding protein [Pisum sativum]
Length = 216
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 127/206 (61%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V + F +D+ ++ E S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQRLAETDSKTE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + NQ + ++ + CC
Sbjct: 190 PQTLKI-NQPDQGAGSAQATQKSACC 214
>gi|406868470|gb|EKD21507.1| secretion related Rab/GTPase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 203
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 125/211 (59%), Gaps = 15/211 (7%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAT-EGVNK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEV 178
IL+GNK D + R V+ E G LA E FLE SAK+ +V++ F D+ +I++
Sbjct: 119 ILIGNKCDWEDRRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSLASDIKKRIIDT 178
Query: 179 PSLLEQGSAVVKNQILKQKEVQESARGGNCC 209
S V Q S GG CC
Sbjct: 179 AKTDASASQGV------DVGAQGSGSGGKCC 203
>gi|54696254|gb|AAV38499.1| RAB2, member RAS oncogene family [synthetic construct]
gi|61368760|gb|AAX43232.1| RAB2 member RAS oncogene family [synthetic construct]
Length = 213
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 116/172 (67%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK +IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYTIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|399217674|emb|CCF74561.1| unnamed protein product [Babesia microti strain RI]
Length = 272
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 118/185 (63%), Gaps = 4/185 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FKIL+IGDSGVGKSS+LL ++ +D TIGVDFKIK + + K +KL IWDT
Sbjct: 76 YDYLFKILIIGDSGVGKSSLLLRFSDDTFNDSFLSTIGVDFKIKTVNIDKKSVKLQIWDT 135
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYY+GA GII+VYDVT +E+F N+ W ++E Y+ K+LVGNK
Sbjct: 136 AGQERFRTITSSYYKGAQGIIVVYDVTNKESFDNVKK-WLDDIEKYAA-PSVTKMLVGNK 193
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
+D ++ R V + A F+E SAK + +V++ F L+ + L+ S GS
Sbjct: 194 IDVEANRQVKSQTAKDYATSQNMTFIESSAKESTNVERAFL-LMAESLKNSSKTTHGSGS 252
Query: 189 VKNQI 193
K I
Sbjct: 253 AKKNI 257
>gi|350534422|ref|NP_001234140.1| ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
gi|5669640|gb|AAD46405.1|AF096249_1 ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
Length = 216
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 129/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S+ TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSLTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V+Q F +D+ ++ + S E
Sbjct: 130 ADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLADTDSKAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + NQ ++++ CC
Sbjct: 190 PSTLKI-NQPEAGAGGSQTSQKSACC 214
>gi|365760935|gb|EHN02617.1| Sec4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 215
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 118/171 (69%), Gaps = 6/171 (3%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIW 66
SYD KILLIGDSGVGKS +L+ + + + PS TIG+DFKIK + + GK++KL +W
Sbjct: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFN-PSFITTIGIDFKIKTVDINGKKVKLQLW 74
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+T++YYRGA GIILVYDVT TFTN+ W K V ++T++ + +LVG
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHATDEAQL-LLVG 132
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
NK D D+ R VT ++G LA+E F+E SAKN ++V + F L I E
Sbjct: 133 NKSDMDT-RVVTVDQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182
>gi|225718734|gb|ACO15213.1| Ras-related protein Rab-2 [Caligus clemensi]
Length = 212
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 115/163 (70%), Gaps = 7/163 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++++ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMISIEGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF++L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFSHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D +++R V REEG A+EH +F+E SAK +V++ F
Sbjct: 118 GNKSDLEAKRDVKREEGEAFAREHGLIFMETSAKTAANVEEAF 160
>gi|452988932|gb|EME88687.1| hypothetical protein MYCFIDRAFT_58012 [Pseudocercospora fijiensis
CIRAD86]
Length = 206
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 115/173 (66%), Gaps = 5/173 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAT-EGVNK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
IL+GNK D + +RAV+ E+G LA E F+E SAK+ +V + F L I
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFMEVSAKSNINVDKAFYSLATDI 171
>gi|112983258|ref|NP_001037612.1| GTP-binding protein RAB2 [Bombyx mori]
gi|99082890|gb|ABF66620.1| GTP-binding protein RAB2 [Bombyx mori]
Length = 214
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 116/172 (67%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFRPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDT GQE F ++T SYYRGA G +LVYD+TRRETF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTGGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYE 169
>gi|384485106|gb|EIE77286.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 207
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 123/200 (61%), Gaps = 3/200 (1%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 10 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTA 69
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT ++F ++ W +E++ Y+ + K+LVGNK
Sbjct: 70 GQERFRTITSSYYRGAHGIIVVYDVTDEDSFQHVKQ-WMQEIDRYAA-EGVNKLLVGNKS 127
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D ++AV+ E+ A+ K LE SAK+ +V+Q F + +I + Q +
Sbjct: 128 DLTDKKAVSTEQANEFAESIKISLLETSAKDATNVEQAFLTMAKQIKDRMGTTMQQTQTK 187
Query: 190 KNQILKQKEVQESARGGNCC 209
+ Q E + G CC
Sbjct: 188 STVKVGQGASLEPKQSGGCC 207
>gi|50306647|ref|XP_453297.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642431|emb|CAH00393.1| KLLA0D05313p [Kluyveromyces lactis]
Length = 204
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 128/206 (62%), Gaps = 6/206 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NTEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ + W +E++ + T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKT-WLQEIDRFGT-AGVLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE--VPSLLE 183
GNK D ++ V E A F+E SA ++ +V++ F + +I E +
Sbjct: 120 GNKNDLTDKKVVDTEVAKEFADSIGIPFIETSALDSSNVEEAFLIMTKQIKESVAKQQKD 179
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
G A K+ + + + + GG CC
Sbjct: 180 NGRAEDKSNVNLKGQSLTGSNGG-CC 204
>gi|464526|sp|Q05975.1|RAB2_LYMST RecName: Full=Ras-related protein Rab-2
gi|288938|emb|CAA51234.1| RAB2 [Lymnaea stagnalis]
Length = 212
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 113/163 (69%), Gaps = 7/163 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D ++ R V +EEG A+EH +F+E SAK +V++ F
Sbjct: 118 GNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAF 160
>gi|5146|emb|CAA33192.1| YPT1-related protein [Schizosaccharomyces pombe]
Length = 206
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 122/203 (60%), Gaps = 3/203 (1%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIW 66
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + GK +KL IW
Sbjct: 6 NRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIW 65
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+TSSYYRGAHGII+VYDVT +++F N+ W +E++ Y+ + ++LVG
Sbjct: 66 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLQEIDRYAV-EGVNRLLVG 123
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
NK D ++ V A FLE SAK++ +V+Q F + +I E S
Sbjct: 124 NKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFAS 183
Query: 187 AVVKNQILKQKEVQESARGGNCC 209
+ K+ + + S NCC
Sbjct: 184 SNAKSSVKVGQGTNVSQSSSNCC 206
>gi|336269818|ref|XP_003349669.1| hypothetical protein SMAC_07021 [Sordaria macrospora k-hell]
gi|380088808|emb|CCC13243.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 209
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 123/179 (68%), Gaps = 7/179 (3%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP---SPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
+ KILLIG SG GKS++L+ + DP + TIG+DFKIK L V GK +LT++DTA
Sbjct: 9 TLKILLIGPSGAGKSALLMRYCDDEF-DPDTAAATIGIDFKIKRLAVRGKPYRLTLFDTA 67
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF TL++S+YRGAHG+ILVYD++ R +F ++ W E + +T +D LVG K+
Sbjct: 68 GQERFRTLSTSFYRGAHGVILVYDISNRASFMSMER-WFDEAK-SNTVEDVALYLVGAKL 125
Query: 130 DRDSE-RAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
D+ S R VT+EEG+ LA++H F E S+K +E+V++ F +++ +I++ P LL +A
Sbjct: 126 DKASRNREVTQEEGLALAEQHGASFCEASSKTSENVRRPFVEIVNQIVQTPGLLTNATA 184
>gi|169806184|ref|XP_001827837.1| GTPase SAR1-like protein [Enterocytozoon bieneusi H348]
gi|161779285|gb|EDQ31308.1| GTPase SAR1-like protein [Enterocytozoon bieneusi H348]
Length = 225
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 128/213 (60%), Gaps = 16/213 (7%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N +DY FKI+LIGDSGVGK++IL L+SN ++ S PTIGV+F K ++K+ I
Sbjct: 19 NEYFDYLFKIVLIGDSGVGKTNILAKLLSNKFYENSKPTIGVEFGTKFYKFENNKIKIQI 78
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQER+ + S+YYRGA G I+VYD+T +ETF N ++W + ++ S N + +
Sbjct: 79 WDTAGQERYHAIISAYYRGAMGAIIVYDITNKETFKNAITIWMENIK-NSCNHHIPIMFL 137
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D S+R V E + + + C F E SA+N +++ + F++ +E+ E+G
Sbjct: 138 GNKTDLSSQREVKMEVALSSIESYDCKFFETSAQNGQNIDRAFEEF----IEIIYHKEKG 193
Query: 186 SAVVKNQILKQKE---------VQESARGGNCC 209
+KN++ ++E +Q+ + G CC
Sbjct: 194 KNSLKNKLYVRREDLNGEELKFIQKKQKSG-CC 225
>gi|448089189|ref|XP_004196738.1| Piso0_003963 [Millerozyma farinosa CBS 7064]
gi|448093406|ref|XP_004197769.1| Piso0_003963 [Millerozyma farinosa CBS 7064]
gi|359378160|emb|CCE84419.1| Piso0_003963 [Millerozyma farinosa CBS 7064]
gi|359379191|emb|CCE83388.1| Piso0_003963 [Millerozyma farinosa CBS 7064]
Length = 205
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 116/179 (64%), Gaps = 5/179 (2%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGG 58
M + + SYD K+LL+GDSGVGKS +LL + + +PS TIG+DFKI+ + G
Sbjct: 1 MSGRAPSRSYDMIMKLLLVGDSGVGKSCLLLRFVEDKF-NPSFITTIGIDFKIRTIESKG 59
Query: 59 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQ 118
K++KL +WDTAGQERF T+T++YYRGA GI+L+YDVT TF N+ + W V ++ N+
Sbjct: 60 KKIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRTFENVEN-WFHTVTQHA-NE 117
Query: 119 DCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
D LVGNK D + R V++E+G LA + FLE SAK+ E+V F +L I E
Sbjct: 118 DAQIFLVGNKCDDEENRQVSKEDGQALASKLNVPFLEASAKSNENVDSIFYELASIIQE 176
>gi|242089159|ref|XP_002440412.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
gi|241945697|gb|EES18842.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
Length = 205
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 126/208 (60%), Gaps = 17/208 (8%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + + GK +KL IWDT
Sbjct: 7 YDYLFKLLLIGDSSVGKSCLLLRFADDSFVDTYISTIGVDFKIRTVDLDGKTVKLQIWDT 66
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ C K+LVGNK
Sbjct: 67 AGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQ-WLSEIDRYASDNVC-KLLVGNK 124
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDL---LYKILEVPSLLEQG 185
D + V E+ A F+E SAK + +V++ F + + K + +E+
Sbjct: 125 CDLVDSKVVETEKAKAFADSLGIPFIETSAKESINVEEAFLTMSSEIKKRMATQPTVERR 184
Query: 186 SAV---VKNQILKQKEVQESARGGNCCS 210
V +K Q ++QK +CCS
Sbjct: 185 PTVHVHMKGQPIQQK--------SSCCS 204
>gi|157167495|ref|XP_001654824.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|157167497|ref|XP_001654825.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|108882449|gb|EAT46674.1| AAEL002155-PA [Aedes aegypti]
gi|403182468|gb|EJY57406.1| AAEL002155-PB [Aedes aegypti]
Length = 204
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 119/177 (67%), Gaps = 3/177 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + ++ ++ N+D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVK-WLRNIDEHA-NEDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
++GNK D +R V+ E G +A+EH F+E SAK ++++ F++L IL+ S
Sbjct: 119 ILGNKCDMTDKRVVSIERGESIAREHDIRFMETSAKANINIERAFRELAEAILDKTS 175
>gi|149394773|gb|ABR27273.1| Rab A61 [Nyctotherus ovalis]
Length = 206
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 129/200 (64%), Gaps = 3/200 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTIWDT 68
Y+ FK+LLIG+SGVGKS +L+ N+ + TIGVDFKIK T+ K +KL IWDT
Sbjct: 9 YNLLFKLLLIGNSGVGKSCLLMRYAENTFTENFFNTIGVDFKIKTTTLDSKIIKLQIWDT 68
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF TLTSSYYRGAHGI++VYDVT +++F + + W EV+ + + C +IL+GNK
Sbjct: 69 AGQERFRTLTSSYYRGAHGILIVYDVTDQDSFECVKN-WVSEVDRLANDTVC-RILIGNK 126
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAV 188
DR+++R +T E+G LA++++ FLE AK + V++ F + I E + +Q
Sbjct: 127 CDREADRKITFEQGADLAKQYEMPFLEALAKTSFHVEEVFNVITKAIDEKFAKNQQTQTS 186
Query: 189 VKNQILKQKEVQESARGGNC 208
N++ K ++ + +C
Sbjct: 187 FSNKLKKGSTLEGGPKTTSC 206
>gi|387017924|gb|AFJ51080.1| ras-related protein Rab-10-like [Crotalus adamanteus]
Length = 189
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 122/181 (67%), Gaps = 7/181 (3%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ +L ++ + TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + ++ ++ N+D ++
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVP 179
L+GNK D D +R V + +G +A+EH F E SAK ++++ F +D+L K+ +
Sbjct: 119 LLGNKCDMDDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKVTAIF 178
Query: 180 S 180
S
Sbjct: 179 S 179
>gi|301613321|ref|XP_002936157.1| PREDICTED: ras-related protein Rab-2A [Xenopus (Silurana)
tropicalis]
Length = 211
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 116/172 (67%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
NK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 ANKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|403216071|emb|CCK70569.1| hypothetical protein KNAG_0E03100 [Kazachstania naganishii CBS
8797]
Length = 212
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 119/172 (69%), Gaps = 3/172 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIG+SGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRG+HGII+VYDVT +++F + +W +E++ Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFDGV-KMWLQEIDRYATST-VLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D + +R V + A + FLE SA ++ +V++ F + +I E
Sbjct: 120 GNKCDLNDKRVVEYDVAKEFADANNMPFLETSALDSTNVEEAFLTMARQIKE 171
>gi|343172838|gb|AEL99122.1| Ras-like protein, partial [Silene latifolia]
Length = 196
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 106/163 (65%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YD+ FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + GK +K
Sbjct: 2 SNEYDFLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTTELEGKSVKYRF 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E+ Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEINRYANDSVC-KLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D R V + G LA E FLE SAK+ +V++ F
Sbjct: 120 GNKCDLVENRVVDTQMGQALADELGIPFLETSAKDAVNVEKAF 162
>gi|221121860|ref|XP_002155452.1| PREDICTED: ras-related protein Rab-2-like [Hydra magnipapillata]
Length = 212
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 120/176 (68%), Gaps = 11/176 (6%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S++ + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHSSS-NMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILE 177
GNK D ++ R V +EEG A+EH +F+E SAK +V++ F K++ KI E
Sbjct: 118 GNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIGTAKEIYQKIQE 173
>gi|332373844|gb|AEE62063.1| unknown [Dendroctonus ponderosae]
Length = 202
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 128/208 (61%), Gaps = 12/208 (5%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T +++F N+ W +E+E Y+ + + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDCTDQDSFNNVKQ-WLEEIERYACD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEV---PSL 181
GNK D +++ V + A + FLE SAK+ +V+Q F + I L V S+
Sbjct: 120 GNKSDLTTKKVVDYQTAKEYASQLHIPFLETSAKSATNVEQAFMTMAAHIKLRVGPQTSM 179
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCC 209
+QG V Q ES + G CC
Sbjct: 180 GDQGGKVK----FDQSRPVESTKSG-CC 202
>gi|398407001|ref|XP_003854966.1| hypothetical protein MYCGRDRAFT_99145 [Zymoseptoria tritici IPO323]
gi|339474850|gb|EGP89942.1| hypothetical protein MYCGRDRAFT_99145 [Zymoseptoria tritici IPO323]
Length = 207
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 116/169 (68%), Gaps = 5/169 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
G+ +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 AGSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFSNVEQHAT-EGVNK 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDL 171
IL+GNK D + +RAV+ E+G LA E F+E SAK+ +V++ F L
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFMEVSAKSNINVEKAFFSL 167
>gi|184186107|ref|NP_001116975.1| GTPase homolog [Strongylocentrotus purpuratus]
Length = 207
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 117/161 (72%), Gaps = 3/161 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
+YD+ FK+LLIGDSGVGK+ +L ++ + TIG+DFKI+ + + GK++KL IWD
Sbjct: 4 TYDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRGA GI+LVYD+T +++F N+ + W + +E +++ D K+++GN
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNQKSFDNIRN-WIRNIEEHAS-ADVEKMILGN 121
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
K D D RAV++E+G LA E+ F+E SAK + +V++ F
Sbjct: 122 KCDMDDRRAVSKEKGEQLAIEYGIKFMETSAKASINVEEAF 162
>gi|325303620|tpg|DAA34562.1| TPA_exp: RAS oncogene family member RAB1 [Amblyomma variegatum]
Length = 206
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 122/206 (59%), Gaps = 7/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+ YDVT +E+F N+ W +E++ Y+ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLY--KILEVPSLLE 183
GNK D +++ V A + FLE SAKN +V+Q F + K P E
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADQLGIPFLETSAKNATNVEQAFMTMAAENKNRMGPPTTE 182
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+I VQ RG CC
Sbjct: 183 ANLRGGDGKINPGTPVQ--PRGSGCC 206
>gi|302673708|ref|XP_003026540.1| hypothetical protein SCHCODRAFT_71151 [Schizophyllum commune H4-8]
gi|300100223|gb|EFI91637.1| hypothetical protein SCHCODRAFT_71151 [Schizophyllum commune H4-8]
Length = 209
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 128/207 (61%), Gaps = 9/207 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIWD 67
YD+ K+LLIGDSGVGKS +LL ++ PS TIG+DFKI+ + + GKR+KL IWD
Sbjct: 6 YDFLIKLLLIGDSGVGKSCLLLRFCDDA-WTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W +E +++ + KIL+GN
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WHANIEQHAS-EGVNKILIGN 122
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
K D ++AVT E+G LA E F+E SAK E V++ F +D+ ++++ +
Sbjct: 123 KSDWTDKKAVTEEQGRELANELGIKFMETSAKVNEGVEEAFFTLARDIKTRLIDSQTDAA 182
Query: 184 QGSAVVKNQILKQKEVQESARGGNCCS 210
S ++ + + G CCS
Sbjct: 183 TASTTQNPDAVRIGQGANATAGNGCCS 209
>gi|178056588|ref|NP_001116645.1| ras-related protein Rab-1B [Sus scrofa]
gi|122064946|sp|Q06AU7.1|RAB1B_PIG RecName: Full=Ras-related protein Rab-1B
gi|115394758|gb|ABI97173.1| RAB1B [Sus scrofa]
Length = 201
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 124/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQER T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM---AAEIKKRMGPG 176
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+A + LK GG CC
Sbjct: 177 AASGGERPNLKIDSTPVKQAGGGCC 201
>gi|871508|emb|CAA90082.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 127/207 (61%), Gaps = 15/207 (7%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F +D+ ++ + S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRSE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCCS 210
Q +K + +A GG +
Sbjct: 190 P-------QTIKINQQDPAANGGQAAT 209
>gi|218199351|gb|EEC81778.1| hypothetical protein OsI_25471 [Oryza sativa Indica Group]
Length = 215
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 118/180 (65%), Gaps = 8/180 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V+Q F +D+ ++ E S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKTE 189
>gi|320167737|gb|EFW44636.1| RAB1 [Capsaspora owczarzaki ATCC 30864]
Length = 205
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 113/167 (67%), Gaps = 3/167 (1%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGAHGII+VYDVT +++F N+ W +E++ Y++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQ-WLQEIDRYAS-ETVNKLLVGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
D +++ V A + FLE SAKN +V+Q F + +I
Sbjct: 123 SDLTTKKVVDFTTAKEFADQLSIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|115471321|ref|NP_001059259.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|33146687|dbj|BAC80082.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|50510010|dbj|BAD30623.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|113610795|dbj|BAF21173.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|215696996|dbj|BAG90990.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636727|gb|EEE66859.1| hypothetical protein OsJ_23656 [Oryza sativa Japonica Group]
Length = 215
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 118/180 (65%), Gaps = 8/180 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V+Q F +D+ ++ E S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKTE 189
>gi|326934043|ref|XP_003213106.1| PREDICTED: ras-related protein Rab-18-B-like [Meleagris gallopavo]
Length = 244
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 112/163 (68%), Gaps = 3/163 (1%)
Query: 41 PSPTIGVDFKIKLLTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETF 100
P T+GVDFK+K + V G ++L IWDTAGQERF +L SYYRG GI+LVYDVTR++TF
Sbjct: 76 PWITMGVDFKVKKMVVNGHTVQLAIWDTAGQERFRSLNPSYYRGTQGIVLVYDVTRKDTF 135
Query: 101 TNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKN 160
T L S W E+E+Y+T + VK+LVGNK D+ +R V R EG+ A++ LF+E SAK
Sbjct: 136 TGLES-WLNELEIYTTKSNTVKMLVGNKTDK-PDREVERREGLQFAKKRSLLFIETSAKT 193
Query: 161 TEDVKQCFKDLLYKILEVPSLLEQGSAVVKNQILKQKEVQESA 203
+ V+ F++L+ KIL+ P+LL++ S K LK+ QE +
Sbjct: 194 EDGVQHAFEELVIKILQTPNLLDR-STEKKGVQLKESSQQEKS 235
>gi|324528770|gb|ADY48949.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 201
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 115/174 (66%), Gaps = 3/174 (1%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ YD FK+LLIGDSGVGK+ IL ++ + TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + ++ +++ +D K+
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVEKM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
L+GNK D R V+RE G +A +H FLE SAK + + F DL IL+
Sbjct: 119 LLGNKCDMADRRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILD 172
>gi|291399649|ref|XP_002716214.1| PREDICTED: RAB2A, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 212
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 116/172 (67%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +L YD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLAYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|402587368|gb|EJW81303.1| hypothetical protein WUBG_07788 [Wuchereria bancrofti]
Length = 212
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 115/170 (67%), Gaps = 7/170 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ K++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDSKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L+S W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLAS-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ R V +EEG A+EH +F+E SAK +V++ F D +I
Sbjct: 118 GNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEI 167
>gi|367035328|ref|XP_003666946.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
gi|347014219|gb|AEO61701.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
Length = 203
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 122/209 (58%), Gaps = 13/209 (6%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGI +VYDVT ++F N+ W +E++ Y+T + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D ++ V A FLE SAKN +V+Q F + +I E G
Sbjct: 120 GNKSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE-----RMG 174
Query: 186 SAVVKNQILKQKEVQ-----ESARGGNCC 209
S++ N V + + G CC
Sbjct: 175 SSIATNNTKANVNVAPGHGVSNNQSGGCC 203
>gi|18447913|dbj|BAB84322.1| ras-related protein RAB8-1 [Nicotiana tabacum]
Length = 216
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 129/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F +D+ ++ E + E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAESDNRAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + NQ + ++A+ CC
Sbjct: 190 PQTIRI-NQPDQGAGGAQTAQKSACC 214
>gi|393911454|gb|EFO26789.2| Ras-like protein Rab-2 [Loa loa]
Length = 212
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 115/170 (67%), Gaps = 7/170 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ K++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDSKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L+S W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLAS-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ R V +EEG A+EH +F+E SAK +V++ F D +I
Sbjct: 118 GNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEI 167
>gi|392579564|gb|EIW72691.1| hypothetical protein TREMEDRAFT_58860 [Tremella mesenterica DSM
1558]
Length = 208
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 117/173 (67%), Gaps = 5/173 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
+G YD+ K+LLIGDSGVGKS +LL ++ PS TIG+DFKI+ + + GK++K
Sbjct: 1 MGGAHYDFLIKLLLIGDSGVGKSCLLLRFCDDA-WTPSFITTIGIDFKIRTIELDGKKIK 59
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT ++F+N+ + W ++ +++ K
Sbjct: 60 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFSNIRT-WHANIDQHAS-PGVNK 117
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
IL+GNK D D +RAV+ E+G LA E FLE SAK E V++ F L I
Sbjct: 118 ILIGNKCDWDDKRAVSLEQGKALADEFGLRFLETSAKANEGVEEAFFTLARDI 170
>gi|443688647|gb|ELT91272.1| hypothetical protein CAPTEDRAFT_159217 [Capitella teleta]
Length = 206
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
+YDY FK+LLIGDSGVGK+ +L ++ + TIG+DFKI+ + + GK++KL IWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELEGKKIKLQIWD 63
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRGA GI+LVYD+T ++F N+ + W + +E +++N D K+++GN
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFYNIRT-WIRNIEEHASN-DVEKMILGN 121
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
K D + R V++E+G LA E+ FLE SAK + +V++ F L I
Sbjct: 122 KCDMNDRRQVSKEKGEALAVEYGVKFLETSAKASINVEEGFISLARDI 169
>gi|330845485|ref|XP_003294614.1| Rab GTPase [Dictyostelium purpureum]
gi|325074885|gb|EGC28854.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 125/204 (61%), Gaps = 4/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N Y Y FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPDYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT + TF N+ W +E++ ++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQ-WLQEIDRFAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A + FLE SAK + +V+Q F + +I + +
Sbjct: 120 GNKSDLVAKKVVDYNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPT 179
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
KN+++ + S + G CC
Sbjct: 180 QTPDKNKVVPGQSAPISTKSG-CC 202
>gi|410730349|ref|XP_003671354.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS 421]
gi|401780172|emb|CCD26111.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS 421]
Length = 207
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 114/170 (67%), Gaps = 6/170 (3%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGG 58
M + YD KILLIGDSGVGKS +L+ + + + PS TIG+DFKIK + + G
Sbjct: 1 MSASANGKGYDSIMKILLIGDSGVGKSCLLVRFVEDKFN-PSFITTIGIDFKIKTVDING 59
Query: 59 KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQ 118
K++KL +WDTAGQERF T+T++YYRGA GIILVYDVT TF+N+ W K V ++ N
Sbjct: 60 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIKQ-WFKTVNEHA-ND 117
Query: 119 DCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
+ +LVGNK D D+ R VT E+G LA+E F+E SAKN ++V + F
Sbjct: 118 EAQLLLVGNKSDMDT-RVVTYEQGESLAKELGLPFVESSAKNDDNVNEIF 166
>gi|345803013|ref|XP_855128.2| PREDICTED: ras-related protein Rab-13 [Canis lupus familiaris]
Length = 293
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 119/169 (70%), Gaps = 3/169 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
+YD+ FK+LLIGDSGVGK+ +++ +S ++ TIG+DFKI+ + V GK++KL +WD
Sbjct: 94 AYDHLFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWD 153
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRGA GIILVYD+T ++F N+ + W K ++ + + ++L+GN
Sbjct: 154 TAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLGN 211
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL 176
K D +++R V +E+ + LA+EH F E SAK++ +V + F L IL
Sbjct: 212 KCDMEAKRKVQKEQAIKLAREHGIRFFETSAKSSTNVDEAFSSLARDIL 260
>gi|426252524|ref|XP_004019959.1| PREDICTED: ras-related protein Rab-1B [Ovis aries]
Length = 332
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 124/202 (61%), Gaps = 5/202 (2%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
S DY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWD
Sbjct: 135 SSDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 194
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LVGN
Sbjct: 195 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 252
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
K D +++ V A FLE SAKN +V+Q F + +I +
Sbjct: 253 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG 312
Query: 188 VVKNQILKQKEVQESARGGNCC 209
N + V+++ GG CC
Sbjct: 313 ERPNLKIDSTPVKQA--GGGCC 332
>gi|281350605|gb|EFB26189.1| hypothetical protein PANDA_004764 [Ailuropoda melanoleuca]
Length = 196
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 123/201 (61%), Gaps = 7/201 (3%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNKS 118
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D +++ V A FLE SAKN +V+Q F + E+ + G+A
Sbjct: 119 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM---AAEIKKRMGPGAASG 175
Query: 190 KNQI-LKQKEVQESARGGNCC 209
+ LK GG CC
Sbjct: 176 GERPNLKIDSTPVKPAGGGCC 196
>gi|223997470|ref|XP_002288408.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|223998436|ref|XP_002288891.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|220975516|gb|EED93844.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220975999|gb|EED94327.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 181
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 112/161 (69%), Gaps = 5/161 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIWD 67
YD K+L+IGDSGVGK+ +LL +N P+ TIG+DFKIK + V GKR+KL IWD
Sbjct: 7 YDMQIKLLMIGDSGVGKTCLLLRY-ANDSFSPTFITTIGIDFKIKNVEVDGKRIKLQIWD 65
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T+SY+RGA GI+LVYDVT R +F ++ + W +++ ++ + KILVGN
Sbjct: 66 TAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRN-WISQIQQHA-DVHVNKILVGN 123
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
K D E+ V+ EEG LA+E F ECSAKN +V+Q F
Sbjct: 124 KCDMLDEKVVSTEEGQKLAKEFGVDFFECSAKNDINVEQSF 164
>gi|115456231|ref|NP_001051716.1| Os03g0819900 [Oryza sativa Japonica Group]
gi|29124128|gb|AAO65869.1| ethylene-responsive small GTP-binding protein [Oryza sativa
Japonica Group]
gi|46392555|gb|AAS91045.1| small GTP-binding protein [Oryza sativa Japonica Group]
gi|108711784|gb|ABF99579.1| Ras-related protein ARA-3, putative, expressed [Oryza sativa
Japonica Group]
gi|113550187|dbj|BAF13630.1| Os03g0819900 [Oryza sativa Japonica Group]
gi|215767248|dbj|BAG99476.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767292|dbj|BAG99520.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193994|gb|EEC76421.1| hypothetical protein OsI_14091 [Oryza sativa Indica Group]
gi|222626056|gb|EEE60188.1| hypothetical protein OsJ_13134 [Oryza sativa Japonica Group]
Length = 214
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 123/189 (65%), Gaps = 8/189 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V+Q F +D+ ++ E S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLSETDSKPE 189
Query: 184 QGSAVVKNQ 192
+ +K++
Sbjct: 190 DRTIKIKSE 198
>gi|426369378|ref|XP_004051668.1| PREDICTED: ras-related protein Rab-1B [Gorilla gorilla gorilla]
Length = 198
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 123/201 (61%), Gaps = 7/201 (3%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 3 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 62
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LVGNK
Sbjct: 63 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNKS 120
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVV 189
D +++ V A FLE SAKN +V+Q F + E+ + G+A
Sbjct: 121 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM---AAEIKKRMGPGAASG 177
Query: 190 KNQI-LKQKEVQESARGGNCC 209
+ LK GG CC
Sbjct: 178 GERPNLKIDSTPVKPAGGGCC 198
>gi|390470849|ref|XP_002755601.2| PREDICTED: ras-related protein Rab-1B [Callithrix jacchus]
Length = 202
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 125/206 (60%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRR-ETFTNLSSVWAKEVELYSTNQDCVKIL 124
WDTAGQERF T+TSSYYRGAHGII+VYDVT + E++ N+ W +E++ Y++ ++ K+L
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGESYANVKQ-WLQEIDRYAS-ENVNKLL 119
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
VGNK D +++ V A FLE SAKN +V+Q F + E+ +
Sbjct: 120 VGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM---AAEIKKRMGP 176
Query: 185 GSAVVKNQI-LKQKEVQESARGGNCC 209
G+A + LK GG CC
Sbjct: 177 GAASGGERPNLKIDSTPVKPAGGGCC 202
>gi|449530081|ref|XP_004172025.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 191
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 106/159 (66%), Gaps = 3/159 (1%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDS VGKS +LL +S D TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 10 DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 69
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+ + C K+LVGNK
Sbjct: 70 GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGNKC 127
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
D + V + A E FLE SAK++ +V+Q F
Sbjct: 128 DLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAF 166
>gi|301095866|ref|XP_002897032.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108461|gb|EEY66513.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
Length = 207
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 129/209 (61%), Gaps = 6/209 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
V ++ YD K+LLIGDSGVGKS +LL +S TIG+DFK+K + V GKR+KL
Sbjct: 2 VHSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVDGKRIKL 61
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T++YYRGA GI++VYDVT +F N+ + W ++ + + + KI
Sbjct: 62 QIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRN-WMTQIR-QNASSNVNKI 119
Query: 124 LVGNKVDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL 182
L+GNK D D SERAVT ++G LA E F E SAK+ E++ + F+ + I + +
Sbjct: 120 LIGNKCDVDPSERAVTTKQGQDLADEFGIKFFETSAKSNENIDEAFRSIAVDIQKRLAES 179
Query: 183 EQGSAVVKN-QILKQKEVQESARGGNCCS 210
E V N + E Q+ + G CC+
Sbjct: 180 EHDRLDVANGSKFRVDESQDQTKDG-CCA 207
>gi|357630896|gb|EHJ78715.1| small GTP binding protein RAB8 [Danaus plexippus]
Length = 209
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTIWD 67
+YDY FK+LLIGDSGVGK+SIL ++ + TIG+DFKI+ + + GK++KL IWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWD 63
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRG+ GI+LVYDVT ++F N+ + W + +E + + D K+++GN
Sbjct: 64 TAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKN-WIRNIE-ENASADVEKMILGN 121
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
K D D++R V++E G LA E++ F+E SAK++ +V+ F L I
Sbjct: 122 KCDLDAKRQVSKERGEQLAVEYQIKFVETSAKDSLNVEYAFYTLARDI 169
>gi|302595187|gb|ADL59582.1| Rab1 [Hevea brasiliensis]
Length = 216
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 129/206 (62%), Gaps = 9/206 (4%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA ++ F E SAK +V++ F +D+ ++ + S E
Sbjct: 130 ADMDESKRAVPTSKGQALADKYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + NQ + ++A+ CC
Sbjct: 190 PQTIKI-NQPDQAGGANQAAQKSACC 214
>gi|255570175|ref|XP_002526048.1| protein with unknown function [Ricinus communis]
gi|223534629|gb|EEF36325.1| protein with unknown function [Ricinus communis]
Length = 211
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 116/172 (67%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SYDY FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ + +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTIDSRPIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++ ++ N + +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMTIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D RAV++EEG A+E+ LFLE SA+ ++V++ F KIL+
Sbjct: 118 GNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAGKILQ 169
>gi|89257659|gb|ABD65146.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 235
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 122/202 (60%), Gaps = 16/202 (7%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
DY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL IWDTA
Sbjct: 47 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 106
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+TSSYYRGAHGII+ YDVT +E+F N+ W E++ Y++ + K+LVGNK
Sbjct: 107 GQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQ-WLNEIDRYAS-ESVNKLLVGNKN 164
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQGSAV 188
D S++A E G+ FLE SAKN +V++ F + I + S GS
Sbjct: 165 DLTSQKAFADELGI--------PFLETSAKNATNVEEAFMAMTAAIKTRMASQPSGGSKP 216
Query: 189 VKNQILKQKEVQESARGGNCCS 210
QI Q Q+S CCS
Sbjct: 217 ATVQIRGQPVNQQSG----CCS 234
>gi|156035711|ref|XP_001585967.1| GTP-binding protein SAS1 [Sclerotinia sclerotiorum 1980]
gi|154698464|gb|EDN98202.1| GTP-binding protein SAS1 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 203
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 115/172 (66%), Gaps = 5/172 (2%)
Query: 6 GNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKL 63
G +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+KL
Sbjct: 3 GTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVKL 61
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T++YYRGA GI+LVYDVT +FTN+ + W VE ++T + KI
Sbjct: 62 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRT-WFSNVEQHAT-EGVNKI 119
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
L+GNK D + +R V+ E G LA E FLE SAK+ +V++ F L I
Sbjct: 120 LIGNKCDWEDKRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSLAADI 171
>gi|88766387|gb|ABD49713.1| RAB/GTPase [Metarhizium anisopliae]
gi|322700923|gb|EFY92675.1| RAB/GTPase [Metarhizium acridum CQMa 102]
gi|322706646|gb|EFY98226.1| RAB/GTPase [Metarhizium anisopliae ARSEF 23]
Length = 203
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/173 (49%), Positives = 116/173 (67%), Gaps = 5/173 (2%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLK 62
V N +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+K
Sbjct: 2 VNNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVK 60
Query: 63 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVK 122
L IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + VE ++T + +
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFQNVEQHAT-EGVNR 118
Query: 123 ILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
IL+GNK D + +R V+ E+G LA E FLE SAK+ ++ + F L I
Sbjct: 119 ILIGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADI 171
>gi|170581209|ref|XP_001895584.1| Ras-related protein Rab-14 [Brugia malayi]
gi|158597400|gb|EDP35557.1| Ras-related protein Rab-14, putative [Brugia malayi]
Length = 213
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 118/212 (55%), Gaps = 8/212 (3%)
Query: 3 SKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSP-TIGVDFKIKLLTVGGKRL 61
S G +Y Y FK ++IGD GVGKS +L P TIGV+F +++ V G+++
Sbjct: 2 SSNGPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI 61
Query: 62 KLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCV 121
KL IWDTAGQERF +T SYYRGA G ++VYD+TRR T+ +LSS A L T+ + V
Sbjct: 62 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADARNL--THPNTV 119
Query: 122 KILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE---- 177
++GNK D D +R VT EE A EH FLECSAK ++V+ F D KI +
Sbjct: 120 IFMIGNKSDLDGQRDVTFEEAKAFADEHGLTFLECSAKTGDNVEDAFLDTARKIYQNIKD 179
Query: 178 -VPSLLEQGSAVVKNQILKQKEVQESARGGNC 208
L + + V Q L + G NC
Sbjct: 180 GSLDLNQADTGVQPKQTLPRSTQSAGQEGKNC 211
>gi|57997511|emb|CAI46103.1| hypothetical protein [Homo sapiens]
Length = 209
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 123/187 (65%), Gaps = 10/187 (5%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++ +S++ + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +S R V REEG A+EH +F+E SAK +V++ F + E+ ++QG
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAF---INTAKEIYRKIQQG 174
Query: 186 SAVVKNQ 192
V N+
Sbjct: 175 LFDVHNE 181
>gi|302764578|ref|XP_002965710.1| rab family GTPase [Selaginella moellendorffii]
gi|302779692|ref|XP_002971621.1| rab family GTPase [Selaginella moellendorffii]
gi|300160753|gb|EFJ27370.1| rab family GTPase [Selaginella moellendorffii]
gi|300166524|gb|EFJ33130.1| rab family GTPase [Selaginella moellendorffii]
Length = 210
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 121/187 (64%), Gaps = 10/187 (5%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SY Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ K +KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDNKPIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++ ++ N + +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NSNMTIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D RAV+ EEG A+EH +F+E SAK ++V++ F + KI + +E+G
Sbjct: 118 GNKADLAHRRAVSTEEGEQFAKEHGLIFMETSAKTAQNVEEAFINTASKIHQK---IEEG 174
Query: 186 SAVVKNQ 192
V N+
Sbjct: 175 VFDVSNE 181
>gi|356570243|ref|XP_003553299.1| PREDICTED: ras-related protein RABB1b-like [Glycine max]
Length = 211
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 133/218 (61%), Gaps = 24/218 (11%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SYDY FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ + +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTIDSRPIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L+S W ++ ++ N + +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLAS-WLEDARQHA-NPNMTIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D RAV++EEG A+E+ LFLE SA+ ++V++ F KIL+ +++G
Sbjct: 118 GNKCDLSHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAGKILQN---IQEG 174
Query: 186 SAVVKNQIL-------------KQKEVQESARGGNCCS 210
V N+ ++ SARGG CCS
Sbjct: 175 VFDVSNESFGIKVGYGRPQGQPGARDGTVSARGG-CCS 211
>gi|260787287|ref|XP_002588685.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
gi|229273853|gb|EEN44696.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
Length = 203
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 128/211 (60%), Gaps = 14/211 (6%)
Query: 5 VGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKL 63
+ +YD FK+LLIGDSGVGK+ IL ++ + TIG+DFKIK + + GK++KL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKL 60
Query: 64 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKI 123
IWDTAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + ++ ++ N+D ++
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNPKSFDNISK-WLRNIDEHA-NEDVERM 118
Query: 124 LVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVP 179
L+GNK D + +R V + G +A+EH F E SAK ++++ F +D+L K
Sbjct: 119 LIGNKCDMEDKRIVGTDRGENIAKEHGIRFFETSAKANINIEKAFMTLAEDILRKTPSKD 178
Query: 180 SLLEQGSAVVKNQILKQKEVQESARGGNCCS 210
S E GS V Q S CC+
Sbjct: 179 SGPEAGSVAVGRD-------QSSGFKPRCCN 202
>gi|238508846|ref|XP_002385605.1| Rab GTPase SrgA, putative [Aspergillus flavus NRRL3357]
gi|220688497|gb|EED44850.1| Rab GTPase SrgA, putative [Aspergillus flavus NRRL3357]
Length = 495
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 128/203 (63%), Gaps = 10/203 (4%)
Query: 12 YSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIWDTA 69
Y K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+KL IWDTA
Sbjct: 298 YVIKLLLIGDSGVGKSCCLLRFSEDSF-TPSFITTIGIDFKIRTIELDGKRVKLQIWDTA 356
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE +++ + KIL+GNK
Sbjct: 357 GQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRT-WFSNVEQHAS-EGVHKILIGNKC 414
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI---LEVPSLLEQGS 186
D + +RAV+ E+G LA E FLE SAKN ++++ F +L +I ++ + GS
Sbjct: 415 DWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEIKKGMDTSKSEQPGS 474
Query: 187 AVVKNQILKQKEVQESARGGNCC 209
V I +Q + GG CC
Sbjct: 475 QGV--SIDQQGPGPNGSTGGKCC 495
>gi|187609396|pdb|3CPH|A Chain A, Crystal Structure Of Sec4 In Complex With Rab-Gdi
Length = 213
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 116/171 (67%), Gaps = 6/171 (3%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIW 66
SYD KILLIGDSGVGKS +L+ + + + PS TIG+DFKIK + + GK++KL +W
Sbjct: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFN-PSFITTIGIDFKIKTVDINGKKVKLQLW 74
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF T+T++YYRGA GIILVYDVT TFTN+ W K V ++ N + +LVG
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-NDEAQLLLVG 132
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
NK D ++ R VT ++G LA+E F+E SAKN ++V + F L I E
Sbjct: 133 NKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182
>gi|432871908|ref|XP_004072037.1| PREDICTED: ras-related protein Rab-3D-like [Oryzias latipes]
Length = 220
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 122/185 (65%), Gaps = 5/185 (2%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLTIWD 67
+++ FK+L+IG+S VGK+S+L +S +P+ T+G+DFK+K + KR+KL IWD
Sbjct: 22 FNHMFKLLIIGNSSVGKTSVLFRYADDSF-NPAYVSTVGIDFKVKTVFRNEKRIKLQIWD 80
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQER+ ++T++YYRGA G +L+YD+T +E+F N WA +V+ YS+ V ILVGN
Sbjct: 81 TAGQERYRSITTAYYRGADGFLLMYDITNQESF-NAVRDWATQVQHYSSKNAQV-ILVGN 138
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSA 187
K D + +R +TRE+G LA E LF E SAK +VKQ F+ L+ I E + G+A
Sbjct: 139 KCDMEDDRLITREDGQRLADERGFLFFEASAKENINVKQVFEHLVDVICEQMNTSTDGNA 198
Query: 188 VVKNQ 192
+ N
Sbjct: 199 INSNH 203
>gi|388510710|gb|AFK43421.1| unknown [Lotus japonicus]
Length = 212
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 127/206 (61%), Gaps = 13/206 (6%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + +E ++++ + KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK +V++ F +D+ ++ + S E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
+ + Q + +A+ CC
Sbjct: 190 PQTIKI-----NQPDQPAAAQNFTCC 210
>gi|302895243|ref|XP_003046502.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727429|gb|EEU40789.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 203
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 115/171 (67%), Gaps = 5/171 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLT 64
N +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+KL
Sbjct: 4 NRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W + VE ++T + KIL
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFQNVEQHAT-EGVNKIL 120
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
+GNK D + +R V+ E+G LA E FLE SAK+ ++ + F L I
Sbjct: 121 IGNKCDWEEKRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADI 171
>gi|14475537|emb|CAC41973.1| putative Rab/GTPase [Glomerella lindemuthiana]
Length = 202
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 126/211 (59%), Gaps = 20/211 (9%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLT 64
N +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+KL
Sbjct: 4 NRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE ++T + KIL
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFANVEQHAT-EGVNKIL 120
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQ 184
+GNK D + +R V+ E G LA E FLE SAK+ ++ + F L I +
Sbjct: 121 IGNKCDWEEKRVVSTERGQQLADELGIPFLEVSAKSNINIDKAFYSLAADIKK------- 173
Query: 185 GSAVVKNQILKQKEV------QESARGGNCC 209
++ NQ +Q + S GG CC
Sbjct: 174 --RLIDNQKNEQPAASGVNVGESSGSGGKCC 202
>gi|116196288|ref|XP_001223956.1| hypothetical protein CHGG_04742 [Chaetomium globosum CBS 148.51]
gi|88180655|gb|EAQ88123.1| hypothetical protein CHGG_04742 [Chaetomium globosum CBS 148.51]
Length = 206
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTVGGKRLKLT 64
N +YD+ K+LLIGDSGVGKS LL +S PS TIG+DFKI+ + + GKR+KL
Sbjct: 5 NRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFT-PSFITTIGIDFKIRTIELDGKRVKLQ 63
Query: 65 IWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKIL 124
IWDTAGQERF T+T++YYRGA GI+LVYDVT +F N+ + W VE ++T + KIL
Sbjct: 64 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRT-WFANVEQHAT-EGVNKIL 121
Query: 125 VGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPS 180
+GNK D + +R V+ E G LA E FLE SAK ++ + F D+ +I++
Sbjct: 122 IGNKCDWEEKRVVSTERGQQLADELNIPFLEVSAKTNNNIDKAFYSLAADIKKRIIDTSK 181
Query: 181 LLEQGSAVVKN 191
+ GS N
Sbjct: 182 PDQAGSGPAVN 192
>gi|346987769|gb|AEO51738.1| Rab8 [Helicoverpa armigera]
Length = 203
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 118/164 (71%), Gaps = 3/164 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVH-DPSPTIGVDFKIKLLTVGGKRLKLTIWD 67
+YDY FK+LLIGDSGVGK+SIL ++ + TIG+DFKI+ + + GK++KL IWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWD 63
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRG+ GI+LVYDVT ++F N+ + W + +E + + D K+++GN
Sbjct: 64 TAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKN-WIRNIE-ENASADVEKMILGN 121
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDL 171
K D +++R V++E G LA E++ F+E SAK++ +V+ F L
Sbjct: 122 KCDLEAKRQVSKERGEQLAVEYQIKFIETSAKDSLNVESAFYTL 165
>gi|402595096|gb|EJW89022.1| rab family protein 8 [Wuchereria bancrofti]
Length = 209
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWD 67
SYDY FK+LLIGDSGVGK+ +L +S ++ TIG+DFKI+ + + GK++KL IWD
Sbjct: 4 SYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 68 TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGN 127
TAGQERF T+T++YYRGA GI+LVYD+T ++F N+ + W + +E ++++ D ++++GN
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVDRMIIGN 121
Query: 128 KVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
K D + R V+RE G LA E+ F+E SAK +V++ F L I
Sbjct: 122 KCDIEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDI 169
>gi|402595111|gb|EJW89037.1| RAB protein [Wuchereria bancrofti]
Length = 209
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 133/221 (60%), Gaps = 23/221 (10%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSP----TIGVDFKIKLLTV 56
M + G YD+ FK+L+IGDSGVGKSS+LL N+ SP TIGVDFKI+ +T+
Sbjct: 1 MSAASGPRDYDHLFKLLIIGDSGVGKSSLLLRFADNTF---SPNYITTIGVDFKIRTVTI 57
Query: 57 GGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYST 116
G+R+KL IWDTAGQERF T+TS+YYRG HG+I+VY+VT ++F+N+ W E++ +
Sbjct: 58 NGQRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKR-WLHEID--TN 114
Query: 117 NQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKIL 176
++ K+LVGNK D R V + A+ K F E SAK +V++ F + +L
Sbjct: 115 CENVQKVLVGNKADDPERRVVLEVDARRFAETMKIPFFETSAKENINVEEMFNCITRLVL 174
Query: 177 EV------PSLLEQGSAV-VKNQILKQKEVQESARGGNCCS 210
E ++ + GS V + IL++ E ++ CCS
Sbjct: 175 EAKLRAPQTNIGDSGSGVRLGGSILRRHEKRK------CCS 209
>gi|328849559|gb|EGF98737.1| hypothetical protein MELLADRAFT_73536 [Melampsora larici-populina
98AG31]
Length = 204
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 127/208 (61%), Gaps = 10/208 (4%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YD+ F++LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDFLFQLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKVVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT ++TFTN+ W +E++ Y+ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFTNVKQ-WLQEIDRYAC-EGVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE----VPSL 181
GNK D ++ V A + FLE SAKN+ +V+Q F + +I + P
Sbjct: 120 GNKSDLTQKKVVEYTVAKDFADQLSIPFLETSAKNSTNVEQAFLTMAKQIKDRTGSAPVN 179
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCC 209
A +K + + VQ+ G CC
Sbjct: 180 ATSNKATLK--VGSSQNVQQPQSSG-CC 204
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,100,180,555
Number of Sequences: 23463169
Number of extensions: 118263753
Number of successful extensions: 584729
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18988
Number of HSP's successfully gapped in prelim test: 7101
Number of HSP's that attempted gapping in prelim test: 531628
Number of HSP's gapped (non-prelim): 27175
length of query: 210
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 74
effective length of database: 9,168,204,383
effective search space: 678447124342
effective search space used: 678447124342
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)