BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028315
(210 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49841|RAC2A_ARATH Ras-related protein RABC2a OS=Arabidopsis thaliana GN=RABC2A PE=1
SV=1
Length = 210
Score = 317 bits (811), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 152/210 (72%), Positives = 177/210 (84%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
MGS G + YD SFKILLIGDSGVGKSS+L+S IS+SV D +PTIGVDFKIK LTVGGKR
Sbjct: 1 MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKR 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNL VW KE+ELYSTNQ+C
Sbjct: 61 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQEC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
V++LVGNKVDR+SER V+REEG+ LA+E C+FLECSA+ ++V+QCF++L KI+EVPS
Sbjct: 121 VRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPS 180
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCCS 210
LLE+GS+ VK ILKQK ++ CCS
Sbjct: 181 LLEEGSSAVKRNILKQKPEHQTNTQSGCCS 210
>sp|O23657|RABC1_ARATH Ras-related protein RABC1 OS=Arabidopsis thaliana GN=RABC1 PE=2
SV=1
Length = 212
Score = 289 bits (739), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 136/200 (68%), Positives = 165/200 (82%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
MGS G +DY FK+LLIGDSGVGKSS+LLS SN+ D SPTIGVDFK+K LT+G K+
Sbjct: 1 MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNLS +WAKE++LYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K+LVGNKVD++SERAV+++EG+ A+E+ CLFLECSAK +V+QCF++L+ KILE PS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180
Query: 181 LLEQGSAVVKNQILKQKEVQ 200
L +GS+ K I KQ Q
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQ 200
>sp|Q9SF92|RAC2B_ARATH Ras-related protein RABC2b OS=Arabidopsis thaliana GN=RABC2B PE=2
SV=1
Length = 205
Score = 272 bits (696), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 169/210 (80%), Gaps = 6/210 (2%)
Query: 1 MGSKVGNNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTIGVDFKIKLLTVGGKR 60
MGS G + YD SFKILLIGDSGVGKSS+LLS IS+SV D +PTIGVDFKIK + V GKR
Sbjct: 1 MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKR 60
Query: 61 LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDC 120
LKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL+ +WAKE+ELYSTN DC
Sbjct: 61 LKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDC 120
Query: 121 VKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPS 180
+K+LVGNKVDR+SER V+REEGM LA++ CLF ECSA+ E+V CF++L KI+EVPS
Sbjct: 121 IKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPS 180
Query: 181 LLEQGSAVVKNQILKQKEVQESARGGNCCS 210
LLE+GS+ VK ++ A G CCS
Sbjct: 181 LLEEGSSSVK------RKPDYRAHQGRCCS 204
>sp|P36862|YPTV3_VOLCA GTP-binding protein yptV3 OS=Volvox carteri GN=YPTV3 PE=3 SV=1
Length = 203
Score = 210 bits (534), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 130/177 (73%), Gaps = 1/177 (0%)
Query: 8 NSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIW 66
+S+DY+FK+LL+GDSGVGKS IL S + + TIGVDFK+K LT GKR KLTIW
Sbjct: 4 DSHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIW 63
Query: 67 DTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVG 126
DTAGQERF TLTSSYYRGA GII VYDVTRR+TF +L + W +E ++YST + +K++V
Sbjct: 64 DTAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVA 123
Query: 127 NKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
NKVD ++R V+ EEG A+ H CLF+E SA+ V Q F++LL KIL+ P LLE
Sbjct: 124 NKVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLE 180
>sp|Q6DHC1|RB18B_DANRE Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1
Length = 205
Score = 192 bits (489), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 135/198 (68%), Gaps = 5/198 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K + + G R KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVT+R+TFT L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+D+ R V R EG+ A++H LF+E SAK + V+ F++L+ KIL+ P L E
Sbjct: 126 KDN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWESSIQNHG 184
Query: 191 NQILKQKEVQESARGGNC 208
Q+ + ++ A GG C
Sbjct: 185 VQLSDNEPQRQGACGGYC 202
>sp|P35293|RAB18_MOUSE Ras-related protein Rab-18 OS=Mus musculus GN=Rab18 PE=2 SV=2
Length = 206
Score = 189 bits (480), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 137/198 (69%), Gaps = 8/198 (4%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E + +
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN---Q 181
Query: 191 NQILKQKEVQESARGGNC 208
N+ +K +ES GG C
Sbjct: 182 NKGVKLSHREESRGGGAC 199
>sp|Q5EB77|RAB18_RAT Ras-related protein Rab-18 OS=Rattus norvegicus GN=Rab18 PE=2 SV=1
Length = 206
Score = 189 bits (480), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 137/198 (69%), Gaps = 8/198 (4%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E + +
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN---Q 181
Query: 191 NQILKQKEVQESARGGNC 208
N+ +K +ES GG C
Sbjct: 182 NKGVKLSPREESHGGGAC 199
>sp|Q5ZLG1|RAB18_CHICK Ras-related protein Rab-18 OS=Gallus gallus GN=RAB18 PE=2 SV=1
Length = 206
Score = 187 bits (474), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 96/176 (54%), Positives = 127/176 (72%), Gaps = 5/176 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D VK+LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVKMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E S
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESES 180
>sp|Q5R5H5|RAB18_PONAB Ras-related protein Rab-18 OS=Pongo abelii GN=RAB18 PE=2 SV=1
Length = 206
Score = 184 bits (467), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>sp|Q9NP72|RAB18_HUMAN Ras-related protein Rab-18 OS=Homo sapiens GN=RAB18 PE=1 SV=1
Length = 206
Score = 184 bits (467), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>sp|Q0IIG8|RAB18_BOVIN Ras-related protein Rab-18 OS=Bos taurus GN=RAB18 PE=2 SV=1
Length = 206
Score = 184 bits (467), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS+LL ++ DP + TIGVDFK+K ++V G + KL IWDTAG
Sbjct: 8 TLKILIIGESGVGKSSLLLRF-TDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+ILVYDVTRR+TF L + W E+E Y T D V +LVGNK+D
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID 125
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
+++ R V R EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E
Sbjct: 126 KEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>sp|P90726|RAB18_CAEBR Ras-related protein Rab-18 OS=Caenorhabditis briggsae GN=rab-18
PE=3 SV=1
Length = 202
Score = 181 bits (459), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 123/180 (68%), Gaps = 5/180 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS++L + + V DP + TIGVDF++ +T+ G R+KL IWDTAG
Sbjct: 11 TLKILIIGESGVGKSSLMLRFVDD-VFDPEQAATIGVDFRVTSMTIDGNRVKLAIWDTAG 69
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+I VYDVT R +F L W EV+ Y TN + +K++V NK+D
Sbjct: 70 QERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLKH-WMTEVDTYCTNDNVIKMMVANKID 128
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGSAVVK 190
R VTREEG+ A+ H+ LF+E SAK E V+ F++L+ KI++ P L + +
Sbjct: 129 M-PNRTVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLWDNDRPTFR 187
>sp|Q8MXS1|RAB18_CAEEL Ras-related protein Rab-18 OS=Caenorhabditis elegans GN=rab-18 PE=3
SV=1
Length = 203
Score = 181 bits (458), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 123/173 (71%), Gaps = 5/173 (2%)
Query: 13 SFKILLIGDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAG 70
+ KIL+IG+SGVGKSS++L + + V DP + TIGVDF++ + + G R+KL IWDTAG
Sbjct: 11 TLKILIIGESGVGKSSLMLRFVDD-VFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAG 69
Query: 71 QERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVD 130
QERF TLT SYYRGA G+I VYDVT R +F L+ W +EV+ Y TN + +K++V NK+D
Sbjct: 70 QERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNH-WMQEVDTYCTNDNIIKMMVANKID 128
Query: 131 RDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLE 183
R VTREEG+ A+ H+ LF+E SAK E V+ F++L+ KI++ P L +
Sbjct: 129 M-PNRVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLWD 180
>sp|Q05976|RB18A_LYMST Ras-related protein Rab-18A OS=Lymnaea stagnalis GN=RAB18A PE=2
SV=1
Length = 202
Score = 177 bits (450), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 121/169 (71%), Gaps = 5/169 (2%)
Query: 20 GDSGVGKSSILLSLISNSVHDP--SPTIGVDFKIKLLTVGGKRLKLTIWDTAGQERFGTL 77
G+SGVGKSS+LL ++ DP + TIGVDFK+K LTV G + KL IWDTAGQERF TL
Sbjct: 16 GESGVGKSSLLLRFTEDTF-DPEQAATIGVDFKVKTLTVEGNKTKLAIWDTAGQERFRTL 74
Query: 78 TSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKVDRDSERAV 137
T SYYRGA G+ILVYDV+ +++F L + W E+E +ST D VK+LVGNK+DR + V
Sbjct: 75 TPSYYRGAQGVILVYDVSSKQSFNKLDA-WLNELETFSTKHDMVKMLVGNKIDR-ANHEV 132
Query: 138 TREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQGS 186
T++EG+ A++H LF+E SAK + V+ F++L+ KI++ P L E S
Sbjct: 133 TKDEGLKFARKHHMLFIEASAKTNDGVQCAFEELVEKIIQTPGLWETSS 181
>sp|Q54GY8|RAB18_DICDI Ras-related protein Rab-18 OS=Dictyostelium discoideum GN=rab18
PE=3 SV=1
Length = 202
Score = 176 bits (447), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 123/170 (72%), Gaps = 3/170 (1%)
Query: 11 DYSFKILLIGDSGVGKSSILLSLISNSV-HDPSPTIGVDFKIKLLTVGGKRLKLTIWDTA 69
D +K+LLIGDS VGK+SI+ ++ D TIGV+FK+K + V GK++ L IWDTA
Sbjct: 4 DKQYKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWDTA 63
Query: 70 GQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNKV 129
GQE+F L SSYYRGAHGIIL YDVT+RE+F NL + W EVE ++ + VK+LVGNK+
Sbjct: 64 GQEKFRALISSYYRGAHGIILTYDVTKRESFDNL-NYWLNEVENFANRSNLVKLLVGNKI 122
Query: 130 DRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVP 179
D+++ R VTREEG A++ LF+ECSAK+ ++Q F++L KI+E+P
Sbjct: 123 DKEN-REVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIP 171
>sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1
Length = 203
Score = 169 bits (429), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 124/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D + + V E A E F+E SAKN +V+Q F + I + + Q
Sbjct: 120 GNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKD--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+A Q Q + +CCS
Sbjct: 178 AAANARPATVQIRGQPVNQKTSCCS 202
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 167 bits (424), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 126/205 (61%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S + TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D R V+ E G LA E FLE SAK+ +V++ F + +I + Q
Sbjct: 120 GNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKN--RMASQP 177
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+ Q Q A+ +CCS
Sbjct: 178 ATNASKPATVQMRGQPVAQQSSCCS 202
>sp|Q9SEH3|RAD2C_ARATH Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=1
SV=1
Length = 202
Score = 167 bits (422), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 125/206 (60%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+ YDVT E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQ 184
GNK D S++ V+ E A E FLE SAKN +V++ F + I + S
Sbjct: 120 GNKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAG 179
Query: 185 GSAVVKNQILKQKEVQESARGGNCCS 210
GS QI Q Q+S CCS
Sbjct: 180 GSKPPTVQIRGQPVNQQSG----CCS 201
>sp|P28188|RAD2A_ARATH Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1
SV=3
Length = 203
Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 123/205 (60%), Gaps = 5/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S V TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT E+F N+ W E++ Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D RA+ E A E F+E SAK+ +V+Q F + I E + G
Sbjct: 120 GNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAG 179
Query: 186 SAVVKNQILKQKEVQESARGGNCCS 210
+ + Q Q A+ CCS
Sbjct: 180 NNARPPTV--QIRGQPVAQKNGCCS 202
>sp|Q9FPJ4|RAD2B_ARATH Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2
SV=1
Length = 202
Score = 166 bits (419), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 125/206 (60%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL +S D TIGVDFKI+ + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+ YDVT E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI-LEVPSLLEQ 184
GNK D S++ V+ E A E FLE SAKN +V++ F + I + S
Sbjct: 120 GNKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAG 179
Query: 185 GSAVVKNQILKQKEVQESARGGNCCS 210
G+ QI Q Q+S CCS
Sbjct: 180 GAKPPTVQIRGQPVNQQSG----CCS 201
>sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1
PE=3 SV=1
Length = 203
Score = 164 bits (414), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 130/208 (62%), Gaps = 11/208 (5%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI----LEVPSL 181
GNK D S++ V A E FLE SAKN +V+Q F + +I P
Sbjct: 120 GNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIP 179
Query: 182 LEQGSAVVKNQILKQKEVQESARGGNCC 209
+ G VV+ Q + K + +++ +CC
Sbjct: 180 TKAGGPVVRPQ--EGKPI--NSKSSSCC 203
>sp|Q38922|RAB1B_ARATH Ras-related protein RABB1b OS=Arabidopsis thaliana GN=RABB1B PE=2
SV=1
Length = 211
Score = 164 bits (414), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 119/172 (69%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
SYDY FK ++IGD+GVGKS +LL VHD TIGV+F +++TV G+ +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTVDGRPIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRRETF +L+S W ++ ++ N + +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMSIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +RAV++EEG A+EH LFLE SA+ ++V++ F + KIL+
Sbjct: 118 GNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQ 169
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3
Length = 205
Score = 164 bits (414), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 182
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S GG CC
Sbjct: 183 GGAEKSNVKIQSTPVKQS--GGGCC 205
>sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3
Length = 205
Score = 164 bits (414), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 182
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S GG CC
Sbjct: 183 GGAEKSNVKIQSTPVKQS--GGGCC 205
>sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3
Length = 205
Score = 164 bits (414), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 182
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S GG CC
Sbjct: 183 GGAEKSNVKIQSTPVKQS--GGGCC 205
>sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3
Length = 205
Score = 164 bits (414), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 129/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 182
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S GG CC
Sbjct: 183 GGAEKSNVKIQSTPVKQS--GGGCC 205
>sp|Q9TVU5|RAB1_THEPA Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1
Length = 220
Score = 164 bits (414), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 119/176 (67%), Gaps = 6/176 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FKI++IGDSG GKSS+LL N+ + TIGVDFKIK + + +KL IWDT
Sbjct: 4 YDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDT 63
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TS+YYRGAHGII VYDVT + +F +++ W ++++ Y+T+ C K+L+GNK
Sbjct: 64 AGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPS 180
+D R V+ +E +A+++ ++E SAK +V++ F K L K+ + PS
Sbjct: 123 IDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPS 178
>sp|Q54NU2|RAB1D_DICDI Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D
PE=1 SV=1
Length = 204
Score = 163 bits (412), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 117/178 (65%), Gaps = 10/178 (5%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTIWDT 68
+D+ FKILLIGDSGVGKS +LL +S D TIGVDFKIK L + GK +KL IWDT
Sbjct: 7 HDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDT 66
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TSSYYRGA GIILVYD T +++FTN+ W E++ Y+ ++ K+LVGNK
Sbjct: 67 AGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQ-WMGEIDRYAC-ENVNKLLVGNK 124
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF-------KDLLYKILEVP 179
D +E+ V + A+ + F+E SAKN +V++CF K+ L I E P
Sbjct: 125 TDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLADIQETP 182
>sp|Q4R8X3|RAB1B_MACFA Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2
SV=1
Length = 201
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT RE++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM---AAEIKKRMGPG 176
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+A + LK GG CC
Sbjct: 177 AASGGERPNLKIDSTPVKPAGGGCC 201
>sp|Q4UB16|RAB1_THEAN Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1
Length = 220
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 118/176 (67%), Gaps = 6/176 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDP-SPTIGVDFKIKLLTVGGKRLKLTIWDT 68
YDY FKI++IGDSG GKSS+LL N+ + TIGVDFKIK + + +KL IWDT
Sbjct: 4 YDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDT 63
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+TS+YYRGAHGII VYDVT + +F +++ W ++++ Y+T+ C K+L+GNK
Sbjct: 64 AGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIGNK 122
Query: 129 VDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPS 180
+D R V +E +A+++ ++E SAK +V++ F K L K+ + PS
Sbjct: 123 IDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPS 178
>sp|P16976|YPTM1_MAIZE GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2
Length = 208
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 127/211 (60%), Gaps = 12/211 (5%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N +DY FK+LLIGDS VGKS LL +S D TIGVDFKI+ + V GK +KL I
Sbjct: 2 SNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD+T E+F N+ W E++ Y+ N K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLDEIDRYA-NDSVRKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV-----PS 180
GNK D RAV AQE FLE SAK + +V++ F + I + +
Sbjct: 120 GNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAA 179
Query: 181 LLEQGSAVVKNQILKQKEV-QESARGGNCCS 210
L + S VV+ +K + + QE + CCS
Sbjct: 180 LERKPSNVVQ---MKGRPIQQEQQKSSRCCS 207
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 128/206 (62%), Gaps = 8/206 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEV--PSLLE 183
GNK D +++ V A FLE SAKN +V+Q F + +I + P
Sbjct: 120 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATS 179
Query: 184 QGSAVVKNQILKQKEVQESARGGNCC 209
GS N ++ V+ S GG CC
Sbjct: 180 GGSE-KSNVNIQSTPVKSS--GGGCC 202
>sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1
Length = 203
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLAEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++ V + A E FLE SAKN +V+Q F + +I
Sbjct: 120 GNKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1
Length = 205
Score = 161 bits (408), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 124/204 (60%), Gaps = 4/204 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A + FLE SAKN +V+Q F + +I +
Sbjct: 123 GNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAA 182
Query: 186 SAVVKNQILKQKEVQESARGGNCC 209
S K + SA G CC
Sbjct: 183 SD-SKPSVKINSSTPVSANKGGCC 205
>sp|Q5RE13|RAB1B_PONAB Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1
Length = 201
Score = 161 bits (407), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM---AAEIKKRMGPG 176
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+A + LK GG CC
Sbjct: 177 AASGGERPNLKIDSTPVKPAGGGCC 201
>sp|Q9H0U4|RAB1B_HUMAN Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1
Length = 201
Score = 161 bits (407), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM---AAEIKKRMGPG 176
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+A + LK GG CC
Sbjct: 177 AASGGERPNLKIDSTPVKPAGGGCC 201
>sp|Q52NJ2|RAB1A_PIG Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3
Length = 205
Score = 161 bits (407), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 128/205 (62%), Gaps = 6/205 (2%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 64
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT + +F N+ W +E++ Y++ ++ K+LV
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQ-WLQEIDRYAS-ENVNKLLV 122
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE-VPSLLEQ 184
GNK D +++ V A FLE SAKN +V+Q F + +I + +
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 182
Query: 185 GSAVVKNQILKQKEVQESARGGNCC 209
G A N ++ V++S GG CC
Sbjct: 183 GGAEKSNVKIQSTPVKQS--GGGCC 205
>sp|Q9ZRE2|RABD1_ARATH Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1
SV=1
Length = 205
Score = 161 bits (407), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 110/163 (67%), Gaps = 3/163 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
+N YDY FK+LLIGDS VGKS +LL ++ D TIGVDFKI+ + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYD T E+F N+ W E++ Y+ N+ K+L+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQ-WLSEIDRYA-NESVCKLLI 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF 168
GNK D + V+ E G LA E FLE SAK++ +V+Q F
Sbjct: 120 GNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAF 162
>sp|Q2HJH2|RAB1B_BOVIN Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1
Length = 201
Score = 160 bits (406), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTM---AAEIKKRMGPG 176
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+A + LK GG CC
Sbjct: 177 AASGGERPNLKIDSTPVKQAGGGCC 201
>sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1
PE=3 SV=1
Length = 201
Score = 160 bits (404), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 115/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E+F N+ W E++ Y+ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLHEIDRYAC-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D ++R V+ + A+ FLE SAKN +V++ F + +I
Sbjct: 120 GNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQI 169
>sp|P01123|YPT1_YEAST GTP-binding protein YPT1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT1 PE=1 SV=2
Length = 206
Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 132/214 (61%), Gaps = 20/214 (9%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNS-VHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
N+ YDY FK+LLIG+SGVGKS +LL ++ +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRG+HGII+VYDVT +E+F N +W +E++ Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATST-VLKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLL--- 182
GNK D +R V + A +K FLE SA ++ +V+ F + +I E S
Sbjct: 120 GNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLN 179
Query: 183 -------EQGSAVVKNQILKQKEVQESARGGNCC 209
++G+ +K Q L + GG CC
Sbjct: 180 ETTQKKEDKGNVNLKGQSL-------TNTGGGCC 206
>sp|Q9D1G1|RAB1B_MOUSE Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1
Length = 201
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKI 175
GNK D +++ V A FLE SAKN +V+Q F + +I
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI 169
>sp|P10536|RAB1B_RAT Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1
Length = 201
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 7 NNSYDYSFKILLIGDSGVGKSSILLSLISNSVHDPS-PTIGVDFKIKLLTVGGKRLKLTI 65
N YDY FK+LLIGDSGVGKS +LL ++ + TIGVDFKI+ + + GK +KL I
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQERF T+TSSYYRGAHGII+VYDVT +E++ N+ W +E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLV 119
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILEVPSLLEQG 185
GNK D +++ V A FLE SAKN +V+Q F + E+ + G
Sbjct: 120 GNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTM---AAEIKKRMGPG 176
Query: 186 SAVVKNQI-LKQKEVQESARGGNCC 209
+A + LK + G CC
Sbjct: 177 AASGGERPNLKIDSTPVKSASGGCC 201
>sp|P20790|RAB8A_DICDI Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A
PE=3 SV=1
Length = 208
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 126/192 (65%), Gaps = 11/192 (5%)
Query: 1 MGSKVGNNS--YDYSFKILLIGDSGVGKSSILLSLISNSVHDPS--PTIGVDFKIKLLTV 56
M S N S YDY K+LLIGDSGVGKS +LL +S PS TIG+DFKI+ + +
Sbjct: 1 MTSPATNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFT-PSFITTIGIDFKIRTIEL 59
Query: 57 GGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYST 116
GKR+KL IWDTAGQERF T+T++YYRGA GI+LVYDVT ++F N+ + W + +E ++T
Sbjct: 60 EGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHAT 118
Query: 117 NQDCVKILVGNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLL 172
+ K+L+GNK D ++ V G LA E+ FLE SAKN+ +V++ F KD+
Sbjct: 119 DS-VNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIK 177
Query: 173 YKILEVPSLLEQ 184
++++ P+ Q
Sbjct: 178 KRMIDTPNEQPQ 189
>sp|P53994|RAB2A_MOUSE Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1
Length = 212
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|Q9SF91|RAE1E_ARATH Ras-related protein RABE1e OS=Arabidopsis thaliana GN=RABE1E PE=1
SV=1
Length = 218
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 125/207 (60%), Gaps = 8/207 (3%)
Query: 10 YDYSFKILLIGDSGVGKSSILLSLISNSVHDPSPTI-GVDFKIKLLTVGGKRLKLTIWDT 68
YDY K+LLIGDSGVGKS +LL ++ T G+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 69 AGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILVGNK 128
AGQERF T+T++YYRGA GI+LVYDVT +F N+ + W K +E ++++ KILVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WMKNIEQHASDS-VNKILVGNK 129
Query: 129 VDRD-SERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCF----KDLLYKILEVPSLLE 183
D D S+RAV +G LA E+ F E SAK ++V+Q F KD+ ++ E + E
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESDTKAE 189
Query: 184 QGSAVVKNQILKQKEVQESARGGNCCS 210
+ Q + + CCS
Sbjct: 190 PQGIKITKQDANKASSSSTNEKSACCS 216
>sp|Q5R6B6|RAB2A_PONAB Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1
Length = 212
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|Q4R4X6|RAB2A_MACFA Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2
SV=1
Length = 212
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|P61019|RAB2A_HUMAN Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1
Length = 212
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|P61105|RAB2A_CANFA Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1
Length = 212
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 117/172 (68%), Gaps = 7/172 (4%)
Query: 9 SYDYSFKILLIGDSGVGKSSILLSLIS---NSVHDPSPTIGVDFKIKLLTVGGKRLKLTI 65
+Y Y FK ++IGD+GVGKS +LL VHD TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 66 WDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLSSVWAKEVELYSTNQDCVKILV 125
WDTAGQE F ++T SYYRGA G +LVYD+TRR+TF +L++ W ++ +S N + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHS-NSNMVIMLI 117
Query: 126 GNKVDRDSERAVTREEGMILAQEHKCLFLECSAKNTEDVKQCFKDLLYKILE 177
GNK D +S R V +EEG A+EH +F+E SAK +V++ F + +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,441,137
Number of Sequences: 539616
Number of extensions: 2888693
Number of successful extensions: 17066
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 261
Number of HSP's that attempted gapping in prelim test: 14388
Number of HSP's gapped (non-prelim): 1341
length of query: 210
length of database: 191,569,459
effective HSP length: 112
effective length of query: 98
effective length of database: 131,132,467
effective search space: 12850981766
effective search space used: 12850981766
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)