BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028320
(210 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P69834|ISPD_ARATH 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase,
chloroplastic OS=Arabidopsis thaliana GN=ISPD PE=1 SV=1
Length = 302
Score = 352 bits (903), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 168/204 (82%), Positives = 189/204 (92%)
Query: 1 MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGK 60
MPKQY+PLLGQPIALYSF+TFSRM EVKEIVVVCDP + DIFEE +E I+VDL+F++PGK
Sbjct: 96 MPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESIDVDLRFAIPGK 155
Query: 61 ERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKE 120
ERQDSVYSGLQE+D NSELVCIHDSARPLV ++DV+KVL D VGAAVLGVPAKATIKE
Sbjct: 156 ERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKE 215
Query: 121 ANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYI 180
NS+S VV+TLDRKTLWEMQTPQVIKP+LLKKGFELV EGLEVTDDVSIVE+LKHPVY+
Sbjct: 216 VNSDSLVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEVTDDVSIVEYLKHPVYV 275
Query: 181 TEGSYTNIKVTTPDDLLIAERILN 204
++GSYTNIKVTTPDDLL+AERIL+
Sbjct: 276 SQGSYTNIKVTTPDDLLLAERILS 299
>sp|Q5N8G1|ISPD_ORYSJ 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase,
chloroplastic OS=Oryza sativa subsp. japonica GN=ISPD
PE=2 SV=1
Length = 297
Score = 312 bits (799), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/204 (75%), Positives = 181/204 (88%)
Query: 1 MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGK 60
MPKQYLPLLG PIAL+S TF ++ EVKE+VVVCDP Y DIFE + E + + +KF+LPGK
Sbjct: 92 MPKQYLPLLGLPIALHSLKTFCQLKEVKEVVVVCDPDYKDIFEGSIENVQIPIKFALPGK 151
Query: 61 ERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKE 120
ERQDSVY+GLQE+D +SELVC+HDSARPLV S+DV+KVL DA+ GAAVLGVP KATIKE
Sbjct: 152 ERQDSVYNGLQEIDGDSELVCVHDSARPLVSSEDVKKVLEDAIVHGAAVLGVPVKATIKE 211
Query: 121 ANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYI 180
A+S SFVV+TLDRKTLWEMQTPQV++P LL+ GFELV R+GLEVTDDVSIVE+LKH VYI
Sbjct: 212 ADSNSFVVKTLDRKTLWEMQTPQVMRPSLLRDGFELVKRDGLEVTDDVSIVEYLKHSVYI 271
Query: 181 TEGSYTNIKVTTPDDLLIAERILN 204
TEGSYTNIKVTTPDDLL+AER++N
Sbjct: 272 TEGSYTNIKVTTPDDLLLAERLMN 295
>sp|Q6MEE8|ISPD_PARUW 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Protochlamydia amoebophila (strain UWE25) GN=ispD
PE=3 SV=1
Length = 230
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 140/203 (68%), Gaps = 3/203 (1%)
Query: 1 MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGK 60
+PKQYL + +PIAL+SF + M E+++++VVC+P Y +F T K+N L F+ PG
Sbjct: 25 IPKQYLTIQEKPIALHSFEKLASMPEIEQMIVVCEPQYEQLF--TVYKLNKPLIFARPGL 82
Query: 61 ERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKE 120
RQDS+++G++ + N LVCIHDSARP + +++ + +A + GAAVLGV KATIK
Sbjct: 83 RRQDSLWNGIKLIAGNP-LVCIHDSARPFIEIDRIRQTVAEAEKWGAAVLGVRVKATIKI 141
Query: 121 ANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYI 180
+ F+V T +R LWEMQTPQ+++ LL GF + + L V+DDVS+VE + PV +
Sbjct: 142 CEEKQFIVNTPNRAFLWEMQTPQIVRLKLLYDGFSVAQKNELTVSDDVSLVELIDKPVKV 201
Query: 181 TEGSYTNIKVTTPDDLLIAERIL 203
EGSY NIK+TTP+DLLIA+ IL
Sbjct: 202 VEGSYLNIKITTPEDLLIAQSIL 224
>sp|Q9Z7X5|ISPD_CHLPN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Chlamydia pneumoniae GN=ispD PE=3 SV=1
Length = 211
Score = 154 bits (390), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 120/203 (59%), Gaps = 12/203 (5%)
Query: 1 MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGK 60
+PKQYLPL G P+ L+S S + ++ E++VVCDPSY + F+E + F++PG+
Sbjct: 21 IPKQYLPLNGTPLVLHSLKILSSLPQIAEVIVVCDPSYQETFQE------YPVSFAIPGE 74
Query: 61 ERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKE 120
RQDSV+SGLQ+V + V IHD ARP + ++ +L A ++GA L P TIK+
Sbjct: 75 RRQDSVFSGLQQVSY--PWVIIHDGARPFIYPDEIHDLLETAEKIGATALASPIPYTIKQ 132
Query: 121 ANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYI 180
N VRTLDR L + TPQ IK ++L++G L + L + DD+ E + P +
Sbjct: 133 RNP----VRTLDRDNLAIIHTPQCIKTEILREGLALAKEKQLTLVDDIEAAEIIGKPSQL 188
Query: 181 TEGSYTNIKVTTPDDLLIAERIL 203
+ IK++ P+DL IA+ +L
Sbjct: 189 VFNKHPQIKISYPEDLTIAQALL 211
>sp|Q5L433|ISPD_GEOKA 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Geobacillus kaustophilus (strain HTA426) GN=ispD PE=3
SV=1
Length = 228
Score = 150 bits (379), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 121/205 (59%), Gaps = 4/205 (1%)
Query: 1 MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLP-- 58
M KQ+L L G+P+ + + F R IV+V +P+ FE+ + + +L
Sbjct: 20 MNKQFLELGGEPLIVRTLNVFERDERCTRIVLVVNPAERSRFEQLLARFRIQKVAALTDG 79
Query: 59 GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATI 118
G+ERQ SVY+GLQ + E+V IHD ARP V + +++ A++ GAA+ V K TI
Sbjct: 80 GEERQHSVYNGLQALA-GEEIVLIHDGARPFVRVHHLHELVNAAVQYGAAIPAVRVKDTI 138
Query: 119 KEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPV 178
K+AN FV +T+DR +LW +QTPQ + L+ + E + G TDD S+VE + PV
Sbjct: 139 KKANG-LFVEQTIDRSSLWAVQTPQAFRLSLIMEAHEAAKQAGYLGTDDASLVERIGKPV 197
Query: 179 YITEGSYTNIKVTTPDDLLIAERIL 203
I EG Y NIK+TTP+DLL AE IL
Sbjct: 198 KIIEGDYRNIKLTTPEDLLFAEAIL 222
>sp|A4J0Y3|ISPD_DESRM 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Desulfotomaculum reducens (strain MI-1) GN=ispD PE=3
SV=1
Length = 234
Score = 150 bits (378), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 124/204 (60%), Gaps = 3/204 (1%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS--LPGK 60
KQYL L +PI ++ ++ ++ IV+V P + +E K N+ K +PG
Sbjct: 23 KQYLKLQDRPILAHTIDALEQVPDITGIVLVVSPGEETLCQELILKGNLFNKIMAVVPGG 82
Query: 61 E-RQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK 119
+ RQ SVY GL + ++ELV IHD ARPLV ++ ++ +A RVGAA L VP K T+K
Sbjct: 83 DHRQTSVYHGLCSLPGDTELVVIHDGARPLVQRAEISHIIKEARRVGAAALAVPVKDTVK 142
Query: 120 EANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVY 179
N + +V+ T +R+ LW +QTPQV +L+ K + +G+ TDD ++VE L PV
Sbjct: 143 LVNDQGYVIATPNREKLWAVQTPQVFNYELILKAHQDAREKGVYATDDCALVEALGQPVK 202
Query: 180 ITEGSYTNIKVTTPDDLLIAERIL 203
+ +GSY NIK+TTP+D+++A+ L
Sbjct: 203 LVQGSYENIKITTPEDMVMAQAFL 226
>sp|Q8R7S6|ISPD_THETN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Thermoanaerobacter tengcongensis (strain DSM 15242 /
JCM 11007 / NBRC 100824 / MB4) GN=ispD PE=3 SV=1
Length = 227
Score = 146 bits (369), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 121/206 (58%), Gaps = 3/206 (1%)
Query: 1 MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEET---KEKINVDLKFSL 57
+ K YL + G+P+ YS F + +KEI+VV P ++ +E K N K
Sbjct: 20 LNKVYLSIAGKPVLYYSIKAFDEIEWIKEIIVVTSPEETEYCQENVLEKFYWNKPFKIVK 79
Query: 58 PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKAT 117
G+ERQ SVY+G+ VD + E+V IHD ARPLV + + + + A AA +GVP K T
Sbjct: 80 GGEERQYSVYNGISVVDKDCEIVAIHDGARPLVTKEIIMEAIKAAYLYKAAAVGVPVKDT 139
Query: 118 IKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHP 177
IK A+ ++F++ T DR+ LW +QTPQV + +L+ K EG TDD +VE +
Sbjct: 140 IKVADEDNFILDTPDRRYLWAIQTPQVFEKELIVKAHRKALEEGFLGTDDSVLVERMGFK 199
Query: 178 VYITEGSYTNIKVTTPDDLLIAERIL 203
V + EG Y NIK+TTP+DL++AE L
Sbjct: 200 VKLVEGDYKNIKITTPEDLVVAELFL 225
>sp|A4IJG4|ISPD_GEOTN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Geobacillus thermodenitrificans (strain NG80-2)
GN=ispD PE=3 SV=1
Length = 228
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 122/205 (59%), Gaps = 4/205 (1%)
Query: 1 MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LKFSLP 58
M KQ++ L G+P+ + + F IV+V +P+ FE+ E+ + + F+
Sbjct: 20 MNKQFIELGGEPLIVRTLKVFDGDERCNGIVLVVNPTERGQFEQLFERYRIRKVVAFADG 79
Query: 59 GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATI 118
G+ERQ SVY+GLQ + + E+V IHD ARP V + + ++ A++ GAA+ V K TI
Sbjct: 80 GQERQHSVYNGLQALR-SGEIVLIHDGARPFVRIRHLHELADAAVQYGAAIPAVRVKDTI 138
Query: 119 KEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPV 178
K+ + FV +T+DR +LW +QTPQ + L+ + E + G TDD S+VE L PV
Sbjct: 139 KKVDG-LFVEQTIDRSSLWAVQTPQAFRLSLIMEAHEEAKKAGYLGTDDASLVERLGRPV 197
Query: 179 YITEGSYTNIKVTTPDDLLIAERIL 203
I EG Y NIK+TTP+DLL AE IL
Sbjct: 198 KILEGDYRNIKLTTPEDLLFAEAIL 222
>sp|A7Z0L2|ISPD_BACA2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus amyloliquefaciens (strain FZB42) GN=ispD
PE=3 SV=1
Length = 232
Score = 144 bits (364), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 118/208 (56%), Gaps = 5/208 (2%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE--TKEKINVDLKFSLPGK 60
K ++ L G P+ +++ F ++I++V + S + F + + I +++ G
Sbjct: 22 KLFISLKGAPVIIHTLRVFESHAPCQKIILVINESEREDFRQLLAQFPIQTEIELVTGGA 81
Query: 61 ERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKE 120
ERQ SVY GL+ +D S +V +HD ARP V + + K++ A GAAVL VP K TIK
Sbjct: 82 ERQHSVYEGLKMIDKES-VVLVHDGARPFVTHQHIDKLVETAEEAGAAVLAVPVKDTIKR 140
Query: 121 ANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHL-KHPVY 179
A S V T DR +LW +QTPQ + LLK +G TDD S+VE L + V
Sbjct: 141 AEG-SRVAETFDRSSLWAVQTPQAFRLSLLKTAHMEAENKGFLGTDDASLVERLDGYQVS 199
Query: 180 ITEGSYTNIKVTTPDDLLIAERILNLSS 207
I EGSYTNIK+TTPDDL+ AE I+ S
Sbjct: 200 IVEGSYTNIKLTTPDDLIFAEAIMKAES 227
>sp|Q824I4|ISPD_CHLCV 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Chlamydophila caviae (strain GPIC) GN=ispD PE=3 SV=2
Length = 212
Score = 143 bits (361), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 115/202 (56%), Gaps = 12/202 (5%)
Query: 2 PKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKE 61
PKQYLP G+P+ L++ T + E+ E++VVCD SY IFE +KF+ GK
Sbjct: 23 PKQYLPFQGEPLILHALKTALHIPEITEVIVVCDVSYRHIFE------GFPVKFAESGKR 76
Query: 62 RQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEA 121
RQDSV+SGLQ V ++ V IHD RP + +V +++ A + GAA L TIK+
Sbjct: 77 RQDSVFSGLQHV--SNPWVLIHDGVRPFIYPDEVTELIAVAQQTGAATLVSNVPYTIKQR 134
Query: 122 NSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYIT 181
+ V+TLDR L + TPQ +K ++L G E +REG+ + DD E L PV +
Sbjct: 135 HP----VKTLDRDALSIVHTPQCVKTEILSAGLEFASREGITLVDDTQAAELLDIPVSLV 190
Query: 182 EGSYTNIKVTTPDDLLIAERIL 203
+ IK+T P+DL IA +L
Sbjct: 191 SSKHPQIKITYPEDLTIAHALL 212
>sp|A7GJ99|ISPD_CLOBL 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Langeland / NCTC 10281
/ Type F) GN=ispD PE=3 SV=1
Length = 229
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 123/205 (60%), Gaps = 2/205 (0%)
Query: 1 MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--KFSLP 58
+ KQ+L + +PI Y+ FS + EIV+V ++ + +K N++ K
Sbjct: 21 ISKQFLQIKNKPILYYTLSKFSAHESIDEIVLVTLEDKIEVCSDIIDKYNINKVSKIVPG 80
Query: 59 GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATI 118
GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ + A + GAA GV K TI
Sbjct: 81 GKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRCANQYGAAACGVIPKDTI 140
Query: 119 KEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPV 178
K N + F + T +R+ L+ +QTPQ +++ E + + +VTDD ++E+ V
Sbjct: 141 KIKNEKEFAIDTPNREDLFIVQTPQCFNYNIILDCHEKLKKHNKKVTDDTMVLENYGKSV 200
Query: 179 YITEGSYTNIKVTTPDDLLIAERIL 203
Y+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 201 YLYEGSYSNIKITTPEDLILGEQIL 225
>sp|Q9PJT1|ISPD_CHLMU 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Chlamydia muridarum (strain MoPn / Nigg) GN=ispD PE=3
SV=1
Length = 218
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 114/203 (56%), Gaps = 12/203 (5%)
Query: 2 PKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKE 61
PKQY PL G+P+ L++ +++ + ++EIVVVC+ Y ++F +KF+ PG
Sbjct: 23 PKQYTPLCGEPLILHALHSYQSLPFIQEIVVVCEEHYQELFSP------YSVKFASPGAL 76
Query: 62 RQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEA 121
RQDSV+SGLQ+V VC+HD RP V + +V +V AL+ GAA L A TIK
Sbjct: 77 RQDSVFSGLQQVSL--PWVCVHDGVRPFVYANEVSEVCSAALKTGAAALATSATYTIKSR 134
Query: 122 NSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYIT 181
VRTLDR + + TPQ I ++LK+G L N ++DD E L +
Sbjct: 135 TP----VRTLDRDAVAVIHTPQCINTEILKEGLLLANMMDFTLSDDSEAAELLGIEPTLV 190
Query: 182 EGSYTNIKVTTPDDLLIAERILN 204
+ +K+T P+DLL AE +L+
Sbjct: 191 FSNRVQMKITYPEDLLFAEALLS 213
>sp|Q253C1|ISPD_CHLFF 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Chlamydophila felis (strain Fe/C-56) GN=ispD PE=3
SV=1
Length = 212
Score = 141 bits (355), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 115/202 (56%), Gaps = 12/202 (5%)
Query: 2 PKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKE 61
PKQYLP GQP+ L++ + + E+ EI+VVCD SY IFE +KF+ G
Sbjct: 23 PKQYLPFQGQPLILHALNSALLIPEINEIIVVCDASYEHIFE------GYSVKFAPAGMR 76
Query: 62 RQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEA 121
RQDSV+SGL V + V +HD RP + +V ++++ A + GAA L TIK+
Sbjct: 77 RQDSVFSGLHHV--TNPWVLVHDGVRPFIYPDEVSELIVIAQQTGAATLVSNVPYTIKQR 134
Query: 122 NSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYIT 181
N V+TLDR +L + TPQ IK ++L +G EL +RE + + DD E L PV +
Sbjct: 135 NP----VKTLDRDSLSIVHTPQCIKTEILLEGLELADREQITLVDDTQAAELLGIPVSLV 190
Query: 182 EGSYTNIKVTTPDDLLIAERIL 203
+ IK+T P+DL IA +L
Sbjct: 191 SNKHPQIKITYPEDLTIAHALL 212
>sp|Q2RFM0|ISPD_MOOTA 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Moorella thermoacetica (strain ATCC 39073) GN=ispD
PE=3 SV=1
Length = 229
Score = 140 bits (353), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 109/206 (52%), Gaps = 8/206 (3%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDP-----SYSDIFEETKEKINVDLKFSL 57
K +LPL G+P+ YS V EI++V P + E K+ +
Sbjct: 23 KVFLPLAGKPMLAYSLAVAVASPLVDEIIIVTRPDDIPLCRQVVAGEGAGKVKAIVAG-- 80
Query: 58 PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKAT 117
G ERQDS+ GL+ V +E V +HD ARP + ++K ++ A GAA+ +P K T
Sbjct: 81 -GAERQDSIAEGLKAVARAAEWVAVHDGARPFLTPALLEKTILAARNTGAAIAALPVKET 139
Query: 118 IKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHP 177
IK+ V TLDRK LW QTPQV + + L + +G + TDD ++VE L +P
Sbjct: 140 IKQGGEAGIVAATLDRKGLWSAQTPQVFRREWLVDAYREAAEKGWQATDDAALVERLGYP 199
Query: 178 VYITEGSYTNIKVTTPDDLLIAERIL 203
V + G TNIK+TTP DL++A +L
Sbjct: 200 VKLVPGEETNIKITTPGDLVLAGALL 225
>sp|Q0SQB9|ISPD_CLOPS 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium perfringens (strain SM101 / Type A)
GN=ispD PE=3 SV=1
Length = 225
Score = 140 bits (353), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 117/204 (57%), Gaps = 5/204 (2%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL---PG 59
KQ++ + G+PI Y+ F ++ EI++V D F+ E D K S G
Sbjct: 23 KQFIEINGKPIIYYTLKAFEECKDIDEIILVLPKDEIDYFKREIEP-RFDFKISKIIEGG 81
Query: 60 KERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK 119
KERQDSVY+ L + + ++V IHD AR V +K ++ + + GAA GV K TIK
Sbjct: 82 KERQDSVYNALNSIG-DCDIVLIHDGARAFVSNKIIEDGIKYSREFGAAAPGVMPKDTIK 140
Query: 120 EANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVY 179
N E F V T +R +L +QTPQ K +L+KKG V E ++VTDD IVE L VY
Sbjct: 141 VKNLEGFSVDTPNRASLVAVQTPQCFKYNLIKKGHNKVKNEKIQVTDDTMIVELLGEKVY 200
Query: 180 ITEGSYTNIKVTTPDDLLIAERIL 203
+ EG Y NIKVTTP+DL++AE +
Sbjct: 201 LFEGDYKNIKVTTPEDLILAEHFV 224
>sp|A5I7N1|ISPD_CLOBH 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC
13319 / Type A) GN=ispD PE=3 SV=1
Length = 229
Score = 139 bits (351), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 122/205 (59%), Gaps = 2/205 (0%)
Query: 1 MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--KFSLP 58
+ KQ+L + +PI Y+ FS + EIV+V ++ + +K N++ K
Sbjct: 21 ISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCSDIIDKYNINKVSKIVPG 80
Query: 59 GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATI 118
GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ + + GAA GV K TI
Sbjct: 81 GKERQDSVYNGLKGVSKDCEVVLIHDAARPFVTSDIIENGIRYTNQYGAAACGVIPKDTI 140
Query: 119 KEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPV 178
K N + F + T +R+ L+ +QTPQ +++ E + + +VTDD ++E+ V
Sbjct: 141 KIKNEKGFAIDTPNREDLFIVQTPQCFNYNIILSCHEKLKKHNKKVTDDTMVLENYGKSV 200
Query: 179 YITEGSYTNIKVTTPDDLLIAERIL 203
Y+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 201 YLYEGSYSNIKITTPEDLILGEQIL 225
>sp|A7FZ94|ISPD_CLOB1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain ATCC 19397 / Type A)
GN=ispD PE=3 SV=1
Length = 229
Score = 139 bits (351), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 122/205 (59%), Gaps = 2/205 (0%)
Query: 1 MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--KFSLP 58
+ KQ+L + +PI Y+ FS + EIV+V ++ + +K N++ K
Sbjct: 21 ISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCSDIIDKYNINKVSKIVPG 80
Query: 59 GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATI 118
GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ + + GAA GV K TI
Sbjct: 81 GKERQDSVYNGLKGVSKDCEVVLIHDAARPFVTSDIIENGIRYTNQYGAAACGVIPKDTI 140
Query: 119 KEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPV 178
K N + F + T +R+ L+ +QTPQ +++ E + + +VTDD ++E+ V
Sbjct: 141 KIKNEKGFAIDTPNREDLFIVQTPQCFNYNIILSCHEKLKKHNKKVTDDTMVLENYGKSV 200
Query: 179 YITEGSYTNIKVTTPDDLLIAERIL 203
Y+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 201 YLYEGSYSNIKITTPEDLILGEQIL 225
>sp|C1FMX6|ISPD_CLOBJ 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Kyoto / Type A2)
GN=ispD PE=3 SV=1
Length = 229
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 122/205 (59%), Gaps = 2/205 (0%)
Query: 1 MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--KFSLP 58
+ KQ+L + +PI Y+ FS + EIV+V ++ + +K N++ K
Sbjct: 21 ISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCGDIIDKYNINKVSKIVPG 80
Query: 59 GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATI 118
GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ + + GAA GV K TI
Sbjct: 81 GKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRYTNQYGAAACGVIPKDTI 140
Query: 119 KEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPV 178
K N + F + T +R+ L+ +QTPQ +++ E + + +VTDD ++E+ V
Sbjct: 141 KIKNEKGFAIDTPNREDLFIVQTPQCFNYNIILSCHEKLKKHNKKVTDDTMVLENYGKSV 200
Query: 179 YITEGSYTNIKVTTPDDLLIAERIL 203
Y+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 201 YLYEGSYSNIKITTPEDLILGEQIL 225
>sp|Q8XHQ3|ISPD_CLOPE 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium perfringens (strain 13 / Type A) GN=ispD
PE=3 SV=1
Length = 225
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 116/204 (56%), Gaps = 5/204 (2%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL---PG 59
KQ++ + G+PI Y+ F + EI++V D F+ E D K S G
Sbjct: 23 KQFIEINGKPIIYYTLKAFEECKGIDEIILVLPKDEIDYFKREIEP-RFDFKISKIIEGG 81
Query: 60 KERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK 119
KERQDSVY+ L + + ++V IHD AR V +K ++ + + GAA GV K TIK
Sbjct: 82 KERQDSVYNALNSIG-DCDIVLIHDGARAFVSNKIIEDGIKYSREFGAAAPGVMPKDTIK 140
Query: 120 EANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVY 179
N E F V T +R +L +QTPQ K +L+KKG V E ++VTDD IVE L VY
Sbjct: 141 VKNLEGFSVDTPNRASLVAVQTPQCFKYNLIKKGHNKVKNEKIQVTDDTMIVELLGEKVY 200
Query: 180 ITEGSYTNIKVTTPDDLLIAERIL 203
+ EG Y NIKVTTP+DL++AE +
Sbjct: 201 LFEGDYKNIKVTTPEDLILAEHFV 224
>sp|Q0TMM2|ISPD_CLOP1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium perfringens (strain ATCC 13124 / NCTC
8237 / Type A) GN=ispD PE=3 SV=1
Length = 225
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 116/204 (56%), Gaps = 5/204 (2%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL---PG 59
KQ++ + G+PI Y+ F + EI++V D F+ E D K S G
Sbjct: 23 KQFIEINGKPIIYYTLKAFEECKGIDEIILVLPKDEIDYFKREIEP-RFDFKISKIIEGG 81
Query: 60 KERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK 119
KERQDSVY+ L + + ++V IHD AR V +K ++ + + GAA GV K TIK
Sbjct: 82 KERQDSVYNALNSIG-DCDIVLIHDGARAFVSNKIIEDGIKYSREFGAAAPGVMPKDTIK 140
Query: 120 EANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVY 179
N E F V T +R +L +QTPQ K +L+KKG V E ++VTDD IVE L VY
Sbjct: 141 VKNLEGFSVDTPNRASLVAVQTPQCFKYNLIKKGHNKVKNEKIQVTDDTMIVELLGEKVY 200
Query: 180 ITEGSYTNIKVTTPDDLLIAERIL 203
+ EG Y NIKVTTP+DL++AE +
Sbjct: 201 LFEGDYKNIKVTTPEDLILAEHFV 224
>sp|B1KTA8|ISPD_CLOBM 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Loch Maree / Type A3)
GN=ispD PE=3 SV=1
Length = 229
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 120/205 (58%), Gaps = 2/205 (0%)
Query: 1 MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEK--INVDLKFSLP 58
+ KQ+L + +PI Y+ FS + EIV+V ++ E +K IN K
Sbjct: 21 ISKQFLQIKNKPILYYTLNKFSTHESIDEIVLVTLEDKIEVCSEIIDKYSINKVSKIVPG 80
Query: 59 GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATI 118
GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ + A + GAA G+ K TI
Sbjct: 81 GKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRYANQYGAAACGIIPKDTI 140
Query: 119 KEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPV 178
K N + F + T +R+ L+ QTPQ +++ E + + +VTDD ++E V
Sbjct: 141 KIKNEKGFAIDTPNREDLFIAQTPQCFNYNIILDCHEKLKKHNKKVTDDTMVLEDYGKSV 200
Query: 179 YITEGSYTNIKVTTPDDLLIAERIL 203
Y+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 201 YLYEGSYSNIKITTPEDLILGEQIL 225
>sp|Q5L6V2|ISPD_CHLAB 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Chlamydophila abortus (strain S26/3) GN=ispD PE=3
SV=1
Length = 217
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 114/202 (56%), Gaps = 12/202 (5%)
Query: 2 PKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKE 61
PKQYLP G+P+ L++ R+ E+ EI+VVCD +Y IFE +KF+ PG
Sbjct: 28 PKQYLPFRGEPLILHALNMALRIPEISEIIVVCDVNYESIFE------GYPVKFARPGTR 81
Query: 62 RQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEA 121
RQDSV+SGLQ+V + V +HD RP + +V +++ A + GAA L TIK+
Sbjct: 82 RQDSVFSGLQQV--ANPWVLVHDGVRPFIYPDEVTELVTAAYQTGAATLVSNVPYTIKQR 139
Query: 122 NSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYIT 181
+ V+TLDR L + TPQ IK +L +G E N+E + + DD E L PV +
Sbjct: 140 DP----VKTLDRDALSIVHTPQCIKTQILLEGLERANQERITLVDDTQAAELLNLPVALV 195
Query: 182 EGSYTNIKVTTPDDLLIAERIL 203
+ IKVT P+DL +A +L
Sbjct: 196 FNKHPQIKVTYPEDLTLAHALL 217
>sp|C3KVS6|ISPD_CLOB6 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain 657 / Type Ba4) GN=ispD
PE=3 SV=1
Length = 229
Score = 137 bits (345), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 122/205 (59%), Gaps = 2/205 (0%)
Query: 1 MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--KFSLP 58
+ KQ+L + +PI Y+ FS + EIV+V ++ + +K N++ K
Sbjct: 21 ISKQFLQIKNKPILYYTLNKFSTHESIDEIVLVALEDKIEVCSDIIDKYNINKVSKIVPG 80
Query: 59 GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATI 118
GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ + + GAA GV K T+
Sbjct: 81 GKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRYVNQYGAAACGVIPKDTV 140
Query: 119 KEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPV 178
K + + F + T +R+ L+ +QTPQ +++ E + + +VTDD ++E+ V
Sbjct: 141 KIKDEKGFAIDTPNREDLFIVQTPQCFNYNIILDCHEKLKKHNKKVTDDTMVLENYGKSV 200
Query: 179 YITEGSYTNIKVTTPDDLLIAERIL 203
Y+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 201 YLYEGSYSNIKITTPEDLILGEQIL 225
>sp|A8MLB1|ISPD_ALKOO 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Alkaliphilus oremlandii (strain OhILAs) GN=ispD PE=3
SV=1
Length = 236
Score = 136 bits (343), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 115/210 (54%), Gaps = 3/210 (1%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL---PG 59
KQY+ L QPI ++ F M + EI++V + +++ ++ K S G
Sbjct: 26 KQYIQLEAQPIVAHTIKVFEEMDCINEIILVVGAGEVEFLKKSIIEVYGFQKVSAIVEGG 85
Query: 60 KERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK 119
ER+DSVY+GL+ V + +V IHD ARPL+ +++ ++ A GA + VP K TIK
Sbjct: 86 LERRDSVYNGLKAVSQDCSIVLIHDGARPLITKDIIEESIIVAKESGACIAAVPVKDTIK 145
Query: 120 EANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVY 179
+N V+ T R LW +QTPQ + DL+ + + + TDD I+E L H V
Sbjct: 146 ISNDNMEVIHTPKRDNLWSVQTPQTFQYDLILEAYNHQQPKDSTATDDAMILEALGHTVK 205
Query: 180 ITEGSYTNIKVTTPDDLLIAERILNLSSES 209
I GSY NIK+TTP+DL++AE IL E
Sbjct: 206 IIHGSYNNIKITTPEDLIVAEEILKTRREG 235
>sp|B1IGH9|ISPD_CLOBK 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Okra / Type B1) GN=ispD
PE=3 SV=1
Length = 229
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 122/205 (59%), Gaps = 2/205 (0%)
Query: 1 MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDL--KFSLP 58
+ KQ+L + +PI Y+ FS + EIV+V ++ + +K N++ K
Sbjct: 21 ISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCGDIIDKYNINKVSKIVPG 80
Query: 59 GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATI 118
GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ + + GAA GV K TI
Sbjct: 81 GKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRYTNQYGAAACGVIPKDTI 140
Query: 119 KEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPV 178
K + + F + T +R+ L+ +QTPQ +++ E + + +VTDD ++E+ V
Sbjct: 141 KIKSEKGFAIDTPNREDLFIVQTPQCFNYNIILDCHEKLKKHNKKVTDDTMVLENYGKSV 200
Query: 179 YITEGSYTNIKVTTPDDLLIAERIL 203
Y+ EG+Y+NIK+TTP+DL++ E+IL
Sbjct: 201 YLYEGNYSNIKITTPEDLILGEQIL 225
>sp|Q2LUS9|ISPD_SYNAS 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Syntrophus aciditrophicus (strain SB) GN=ispD PE=3
SV=1
Length = 234
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 118/211 (55%), Gaps = 13/211 (6%)
Query: 2 PKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLP--- 58
PKQY + G P+ +++ + + EI++V P +F N++ + L
Sbjct: 23 PKQYFLINGMPVLVHTLLRLQQFPLIDEILLVV-PHSDMVFVRD----NIEKPYQLTKIR 77
Query: 59 -----GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 113
G+ERQDSV +GL+ V E+V IHD RP V K + +V+ A R GAA+ VP
Sbjct: 78 GIVAGGRERQDSVRNGLKCVVEKDEIVVIHDGVRPFVTEKILSRVIDAAHRSGAAIAAVP 137
Query: 114 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEH 173
A T+KE +S+ + TLDRK +W QTPQ ++++ ++ ++ TDD S+VE
Sbjct: 138 AMDTVKEVHSDGHISVTLDRKRIWLAQTPQAFHRRIIQEAYKKAVQDDYYGTDDASLVER 197
Query: 174 LKHPVYITEGSYTNIKVTTPDDLLIAERILN 204
L PV + GS TNIK+TTPDDL++AE L
Sbjct: 198 LGIPVEVVPGSCTNIKITTPDDLILAEAFLK 228
>sp|A5D5L4|ISPD_PELTS 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Pelotomaculum thermopropionicum (strain DSM 13744 /
JCM 10971 / SI) GN=ispD PE=3 SV=1
Length = 238
Score = 134 bits (336), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 115/204 (56%), Gaps = 3/204 (1%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK-EKINVDLKFSL--PG 59
KQYL L G P+ + VK +V V P + F T E++ + ++ G
Sbjct: 23 KQYLSLAGLPVVGHVLRAMEASSAVKSVVTVVAPGEENYFRLTVVERLGIRKVAAIVPGG 82
Query: 60 KERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK 119
+ERQDSVY+GL + ++ +V +HD ARPL+ D+ V+ A GAA L VP K T+K
Sbjct: 83 EERQDSVYNGLLALAPDTGIVVVHDGARPLLSPGDINAVVQAAAAYGAATLAVPVKDTVK 142
Query: 120 EANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVY 179
A + FV+RTL R+ LW +QTPQ + D++ ++ TDD +VE L PV
Sbjct: 143 MAGRDGFVLRTLSREHLWLVQTPQAFRYDIIMNAHRQARQKKYAATDDAGLVELLGRPVK 202
Query: 180 ITEGSYTNIKVTTPDDLLIAERIL 203
I GSY NIK+TTP+DL +AE ++
Sbjct: 203 IVAGSYENIKITTPEDLTVAEAVI 226
>sp|Q18CD1|ISPD_CLOD6 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium difficile (strain 630) GN=ispD PE=3 SV=1
Length = 237
Score = 134 bits (336), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 118/207 (57%), Gaps = 3/207 (1%)
Query: 1 MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK-EKINV-DLKFSLP 58
+ KQ++ L + I ++ F + + EIVV D F+E K N ++K +
Sbjct: 19 INKQFIKLREKEIIAHTIQVFYENINIDEIVVCIKKEEEDFFKENIINKYNFKNIKIAYG 78
Query: 59 GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATI 118
GKERQDS+Y+GL+++D N ++V IHD ARP V + + + + A A V+GVP TI
Sbjct: 79 GKERQDSIYNGLKKLDKNCDIVLIHDGARPFVDHRIINESIKVAKEKKAVVVGVPVSDTI 138
Query: 119 KEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPV 178
K S+ V T +R LW QTPQ + +L+ +E + TDD +VE++ V
Sbjct: 139 KIV-SDGTVKETPERNLLWAAQTPQTFEYNLIIDAYEQAYKNNYYGTDDSMLVENIGQSV 197
Query: 179 YITEGSYTNIKVTTPDDLLIAERILNL 205
+ GSY NIK+T+P+DL IAE+ILN+
Sbjct: 198 TMVMGSYENIKITSPEDLNIAEQILNM 224
>sp|A5N4M5|ISPD_CLOK5 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 /
NCIMB 10680) GN=ispD PE=3 SV=1
Length = 231
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 10/210 (4%)
Query: 1 MP--KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVD--L 53
MP KQ++ + G+PI YS FS+ V +IV+VC + Y +E +K N D +
Sbjct: 19 MPINKQFICIQGKPILYYSISVFSKNPLVDKIVLVCAEDEIEYCK--QEIVKKYNFDKVV 76
Query: 54 KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 113
K GKERQ SV++ L+ ++ N +V IHD ARP V + ++ + + GA GV
Sbjct: 77 KIVSGGKERQHSVFNALKVLE-NCSVVLIHDGARPFVTDRIIEDGIKYSNMYGACACGVV 135
Query: 114 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEH 173
K TIK E F +TL RK L+ +QTPQ +L+ + + ++VTDD ++ E+
Sbjct: 136 PKDTIKIKGKEGFSYKTLVRKELFIVQTPQCFDYNLIYDCHKKLANNKVQVTDDTTVAEY 195
Query: 174 LKHPVYITEGSYTNIKVTTPDDLLIAERIL 203
+ VY+ EGSY NIK+TTP+DL+IAE I
Sbjct: 196 FGNMVYLYEGSYDNIKITTPEDLIIAENIF 225
>sp|B9DY87|ISPD_CLOK1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium kluyveri (strain NBRC 12016) GN=ispD PE=3
SV=1
Length = 231
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 10/210 (4%)
Query: 1 MP--KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDIFEETKEKINVD--L 53
MP KQ++ + G+PI YS FS+ V +IV+VC + Y +E +K N D +
Sbjct: 19 MPINKQFICIQGKPILYYSISVFSKNPLVDKIVLVCAEDEIEYCK--QEIVKKYNFDKVV 76
Query: 54 KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVP 113
K GKERQ SV++ L+ ++ N +V IHD ARP V + ++ + + GA GV
Sbjct: 77 KIVSGGKERQHSVFNALKVLE-NCSVVLIHDGARPFVTDRIIEDGIKYSNMYGACACGVV 135
Query: 114 AKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEH 173
K TIK E F +TL RK L+ +QTPQ +L+ + + ++VTDD ++ E+
Sbjct: 136 PKDTIKIKGKEGFSYKTLVRKELFIVQTPQCFDYNLIYDCHKKLANNKVQVTDDTTVAEY 195
Query: 174 LKHPVYITEGSYTNIKVTTPDDLLIAERIL 203
+ VY+ EGSY NIK+TTP+DL+IAE I
Sbjct: 196 FGNMVYLYEGSYDNIKITTPEDLIIAENIF 225
>sp|B5YF77|ISPD_DICT6 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM
3960 / H-6-12) GN=ispD PE=3 SV=1
Length = 231
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 120/205 (58%), Gaps = 12/205 (5%)
Query: 10 GQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS------LPGKERQ 63
G PI YS + ++++I++V +++ E KEKI D K L G+ERQ
Sbjct: 28 GMPIVYYSIRKLHDIKDIEKIILVVR---NEMLEYYKEKIK-DWKLEKVYKLVLGGEERQ 83
Query: 64 DSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVG-AAVLGVPAKATIKEA- 121
DSVY+ L+ VDF+ + V IHD+ARP V K +++++ +A+LG+P K TIK
Sbjct: 84 DSVYNALKSVDFHCDYVLIHDAARPFVSIKKIEELIKFCTENSLSAILGIPVKDTIKVVD 143
Query: 122 NSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYIT 181
N+ ++ TLDR LW +QTPQ+ +++K+ + E TDD S+VE L PVY+
Sbjct: 144 NTTKRIMETLDRSKLWIIQTPQMFPFEIIKEAHKKAREENFVGTDDASLVERLGIPVYVI 203
Query: 182 EGSYTNIKVTTPDDLLIAERILNLS 206
EG NIK+TT DDLL E IL+ S
Sbjct: 204 EGEPFNIKITTKDDLLWMEGILSKS 228
>sp|B1I0S9|ISPDF_DESAP Bifunctional enzyme IspD/IspF OS=Desulforudis audaxviator (strain
MP104C) GN=ispDF PE=3 SV=1
Length = 394
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 108/208 (51%), Gaps = 10/208 (4%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFS-----L 57
KQY L G+P+ + F V +V+V P D +E+I F+ +
Sbjct: 23 KQYRLLAGRPVLGRTLEVFEHAPAVDGVVLVVAPGEEDW---CREEIVTRFGFTKVVAVV 79
Query: 58 PGKE-RQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKA 116
PG E R+DSV++GLQ + LV +HD RP V ++ + V A GAA L VP K
Sbjct: 80 PGGEVRRDSVWAGLQALP-PCALVLVHDGVRPFVTARQIAAVAEAARECGAATLAVPPKD 138
Query: 117 TIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKH 176
T+K V TL R+ LW +QTPQ + D+L K L GL TDD S+ E +
Sbjct: 139 TVKLGGPPGAPVSTLPRENLWLVQTPQAFRFDVLIKAHHLARERGLAATDDTSLAEAAGY 198
Query: 177 PVYITEGSYTNIKVTTPDDLLIAERILN 204
V + G+YTNIK+TTP+DL AE +L
Sbjct: 199 DVRMVPGAYTNIKITTPEDLAFAEALLG 226
>sp|Q9KGF8|ISPD_BACHD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197
/ FERM 7344 / JCM 9153 / C-125) GN=ispD PE=3 SV=1
Length = 228
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 117/203 (57%), Gaps = 4/203 (1%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE--TKEKINVDLKFSLPGK 60
KQ++ L G+PI ++ F + +V+V + + E + +I+ K G+
Sbjct: 22 KQFIELGGKPILAHTLAVFEQDDWCTNVVIVANEQEIEEMGELANRYQISKAKKIVAGGR 81
Query: 61 ERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKE 120
ERQ+SV++GL+ + + LV IHD ARP V K++ ++ A + AAVL VP K TIK
Sbjct: 82 ERQESVFAGLKALSQDG-LVLIHDGARPFVTEKEIHSLVETAAKTHAAVLAVPVKDTIKR 140
Query: 121 ANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYI 180
E+ V+ T+ R+ LW +QTPQ L+K+ + E + TDD S++E L + V +
Sbjct: 141 VEGEA-VLETMPREELWAVQTPQAFDLALIKQAHQKAENEQMLGTDDASLMEWLGYSVAV 199
Query: 181 TEGSYTNIKVTTPDDLLIAERIL 203
+GSY N K+TTP+DLL AE IL
Sbjct: 200 VQGSYFNFKLTTPEDLLFAEAIL 222
>sp|A8F958|ISPD_BACP2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus pumilus (strain SAFR-032) GN=ispD PE=3 SV=1
Length = 229
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 117/205 (57%), Gaps = 5/205 (2%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL--PGK 60
K ++ L P+ +++ F + K +++ + FE + SL G+
Sbjct: 22 KLFIELKRMPVIIHTLKVFDAHAQCKRMILAINEEERQDFERLLKVHAFQTPVSLVNGGE 81
Query: 61 ERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKE 120
ERQ SVY GL+ V ++++V +HD ARP + + ++ A+ G+AV+ VP K TIK
Sbjct: 82 ERQQSVYEGLKAVK-DADIVLVHDGARPFIKHTQIDLLVKAAIEKGSAVVAVPVKDTIKR 140
Query: 121 ANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLK-HPVY 179
E V +T++R++LW +QTPQ + +LK+ E R G TDD S+VE L VY
Sbjct: 141 VQ-EGKVEQTIERQSLWAVQTPQAFRHSILKEAHEYAERTGFLGTDDASLVEQLHGENVY 199
Query: 180 ITEGSYTNIKVTTPDDLLIAERILN 204
I +G YTNIK+TTPDDLL+A+ I++
Sbjct: 200 IVQGDYTNIKLTTPDDLLVAKAIMD 224
>sp|Q06755|ISPD_BACSU 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus subtilis (strain 168) GN=ispD PE=3 SV=2
Length = 232
Score = 130 bits (326), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 116/208 (55%), Gaps = 5/208 (2%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE--TKEKINVDLKFSLPGK 60
K ++ L G P+ +++ F + +I++V + + F++ + ++ G
Sbjct: 22 KLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQEREHFQQLLSDYPFQTSIELVAGGD 81
Query: 61 ERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKE 120
ERQ SVY GL+ V ++V +HD ARP + + + +++ +A + GAA+L VP K TIK
Sbjct: 82 ERQHSVYKGLKAVK-QEKIVLVHDGARPFIKHEQIDELIAEAEQTGAAILAVPVKDTIKR 140
Query: 121 ANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLK-HPVY 179
V T++R +LW +QTPQ + LL K R+G TDD S+VE ++ V
Sbjct: 141 VQDLQ-VSETIERSSLWAVQTPQAFRLSLLMKAHAEAERKGFLGTDDASLVEQMEGGSVR 199
Query: 180 ITEGSYTNIKVTTPDDLLIAERILNLSS 207
+ EGSYTNIK+TTPDDL AE I+ S
Sbjct: 200 VVEGSYTNIKLTTPDDLTSAEAIMESES 227
>sp|A9VN98|ISPD_BACWK 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus weihenstephanensis (strain KBAB4) GN=ispD
PE=3 SV=1
Length = 226
Score = 130 bits (326), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LKFSLPGK 60
K +L + G PI +++ F + K I++ + FEE +K V+ ++F G
Sbjct: 21 KLFLLINGVPIIVHTLRAFEKDKACKRIIMAINEEERPYFEELMQKYPVEKQVQFIQGGA 80
Query: 61 ERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKE 120
ERQDSVY+ LQ V E V +HD ARP V +K +Q VL A + GA++ VP K TIK+
Sbjct: 81 ERQDSVYNALQYVS-GVEYVLVHDGARPFVTNKMMQDVLTAAEKYGASICAVPVKDTIKK 139
Query: 121 ANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYI 180
+ VV T++R L +QTPQ LL + + TDD S+VE + V +
Sbjct: 140 VE-QGVVVETVERSQLKAVQTPQGFSVPLLLEAHRSAKQSCFLGTDDASLVERVGKKVGV 198
Query: 181 TEGSYTNIKVTTPDDLLIAERILNLSSE 208
EGSY NIKVTTP+DLLIAE L++ +
Sbjct: 199 VEGSYYNIKVTTPEDLLIAESFLHVQKK 226
>sp|B2TIF4|ISPD_CLOBB 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Eklund 17B / Type B)
GN=ispD PE=3 SV=1
Length = 224
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSY------SDIFEETKEKINVDLKFS 56
KQYL L G+PI Y+ +F V I++V PS+ +I E+ K+N K
Sbjct: 21 KQYLSLNGKPILYYTIKSFLDCKLVDNIILVV-PSHEIDYCEKEILEKNSLKVN---KIV 76
Query: 57 LPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKA 116
G ER DSVY+GL E S++V IHD RP V + ++ + + GAA GV K
Sbjct: 77 AGGDERYDSVYNGLIEAK-GSDIVLIHDGVRPFVSKETIENAIKYSEEYGAAAPGVMPKD 135
Query: 117 TIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKH 176
TIK + F + T +R L +QTPQ K DL+ + + E + +TDD + E+ +
Sbjct: 136 TIKIIDDNRFSIDTPNRSHLISVQTPQAFKFDLIYDCHKKIKNENVNITDDTMVAEYFGN 195
Query: 177 PVYITEGSYTNIKVTTPDDLLIAERILN 204
VYI G YTNIK+TTP+DL+I E ++N
Sbjct: 196 KVYIYPGEYTNIKITTPEDLIIGEYLVN 223
>sp|A0PXS4|ISPD_CLONN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium novyi (strain NT) GN=ispD PE=3 SV=1
Length = 231
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 113/206 (54%), Gaps = 4/206 (1%)
Query: 1 MPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPS-YSDIFEETKEKINVDLKFSL-- 57
+ KQ++ L G PI Y+ F + IV+V E +K ++D +
Sbjct: 21 INKQFINLKGNPILYYTLKKFQDNTSIDNIVLVLSKDEIGYCVENVLKKYHLDKVTHIVE 80
Query: 58 PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKAT 117
GK RQ+SV SGL V +SE+V IHD ARP + + ++ + A GA+ GV K T
Sbjct: 81 GGKTRQESVISGLNAVK-DSEIVLIHDGARPFIEDRIIEDGIKYAKLYGASACGVKVKDT 139
Query: 118 IKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHP 177
IK + F TL R+ L+ +QTPQ K DL+ + ++ +EVTDD S+VE H
Sbjct: 140 IKVIAEDGFSKDTLKREELFSVQTPQCFKYDLILNCHKKALKDNIEVTDDTSVVESYGHR 199
Query: 178 VYITEGSYTNIKVTTPDDLLIAERIL 203
VY+ EGSY NIK+TTP+DL + E IL
Sbjct: 200 VYLYEGSYNNIKITTPEDLPMGESIL 225
>sp|Q6ARN9|ISPDF_DESPS Bifunctional enzyme IspD/IspF OS=Desulfotalea psychrophila (strain
LSv54 / DSM 12343) GN=ispDF PE=3 SV=2
Length = 386
Score = 126 bits (317), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 2 PKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINV----DLKFSL 57
PKQY + G PI +++ F++ + +I++V D EE+K + ++
Sbjct: 22 PKQYHAVAGTPIIVHTIRAFNKHPCIAKIILVVP---QDHLEESKALLQKYQLENISIVT 78
Query: 58 PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKAT 117
G RQDSV GLQEV + ++V +HD ARP+V ++ + + A + GA + VP K T
Sbjct: 79 GGARRQDSVLRGLQEVPESIDIVLVHDGARPMVSAELISRCYKGAQQYGAVIAAVPVKDT 138
Query: 118 IKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLE-VTDDVSIVEHLKH 176
+K V T+DR+ LW+ QTPQ + LL K F+ G+ VTD+ +++E +
Sbjct: 139 LKRGAGR-IVTGTVDREGLWQAQTPQAARKALLVKAFK---ENGMRNVTDESTLLEGVGI 194
Query: 177 PVYITEGSYTNIKVTTPDDLLIAERILNLSSE 208
PV + EGS TNIK+T P+DL++AE L E
Sbjct: 195 PVTLIEGSETNIKITRPEDLILAENFLREKKE 226
>sp|A6TWL0|ISPD_ALKMQ 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Alkaliphilus metalliredigens (strain QYMF) GN=ispD
PE=3 SV=1
Length = 241
Score = 126 bits (317), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 115/208 (55%), Gaps = 9/208 (4%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEET---KEKINVDLKFSLPG 59
KQY+ L +PI ++ F + E+ EI++V + + K + K G
Sbjct: 26 KQYIMLENKPILYHTLAVFEKHSEINEIILVVASGEEEYCQGQIIKKYGLKKVRKVVAGG 85
Query: 60 KERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK 119
ER++SV +GL+E++ E+V +HD ARP + + + K + A GA ++ VP K TIK
Sbjct: 86 SERRNSVKNGLEELEEACEVVLVHDGARPFITKEVITKSIEVAYEEGAVIVAVPVKDTIK 145
Query: 120 EANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGF---ELVNREGLEVTDDVSIVEHLKH 176
N + VV T +R+ LW +QTPQV + +LK+ + E R G TDD +VE +
Sbjct: 146 RVNEKMEVVETPERQQLWAVQTPQVFRSGILKRAYKEAEDFERVG---TDDAVLVEAAGY 202
Query: 177 PVYITEGSYTNIKVTTPDDLLIAERILN 204
V + G Y NIKVTTP+DL+I + ILN
Sbjct: 203 TVKVVLGIYENIKVTTPEDLIIGQGILN 230
>sp|Q97EC9|ISPD_CLOAB 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792
/ JCM 1419 / LMG 5710 / VKM B-1787) GN=ispD PE=3 SV=1
Length = 229
Score = 126 bits (317), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEET---KEKINVDLKFSLPG 59
KQ++ + G+PI Y+ F R + EI++V S + + K K N G
Sbjct: 21 KQFILIQGKPILAYTIDKFQRSPLIDEIIIVAAESEINFCMQEIVYKYKFNKVKNIVSGG 80
Query: 60 KERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK 119
ERQ SV +GL+ V ++ +V IHD ARP V +K ++ + A + G A GV K TIK
Sbjct: 81 SERQQSVMNGLKAVK-SANIVLIHDGARPFVDNKIIENGIKYAEKYGGAACGVQPKDTIK 139
Query: 120 EANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVY 179
+ + F +T+DR L+ +QTPQ K D + K +EG+ TDD I E + VY
Sbjct: 140 IKSEDGFSEKTIDRSKLFCVQTPQCFKYDSILKAHINAEKEGILATDDTMIFEMSGNKVY 199
Query: 180 ITEGSYTNIKVTTPDDLLIAERILNLSS 207
+ +GSY N+K+TTPDDL AE +L +S
Sbjct: 200 LYDGSYENLKITTPDDLYAAETLLKKNS 227
>sp|Q6HPT2|ISPD_BACHK 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus thuringiensis subsp. konkukian (strain
97-27) GN=ispD PE=3 SV=1
Length = 226
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 111/199 (55%), Gaps = 4/199 (2%)
Query: 12 PIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LKFSLPGKERQDSVYSG 69
PI +++ F + K I++ + FEE +K V+ ++F G ERQDSVY+
Sbjct: 30 PIIVHTLRAFEKDKACKNIIMAINEEERPYFEELMQKYPVEKPVQFIQGGAERQDSVYNA 89
Query: 70 LQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVR 129
+Q + E V +HD ARP V +K +Q VL A + GA++ VP K T+K+ + VV
Sbjct: 90 IQHTT-DVEYVLVHDGARPFVTNKVIQDVLTAAEKYGASICAVPVKDTVKKVE-QGVVVE 147
Query: 130 TLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIK 189
T++R L +QTPQ LL + + TDD S+VE + V + EGSY NIK
Sbjct: 148 TVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCFLGTDDASLVERIGKQVGVVEGSYYNIK 207
Query: 190 VTTPDDLLIAERILNLSSE 208
VTTP+DLLIAE L++ +
Sbjct: 208 VTTPEDLLIAESFLHVQKK 226
>sp|Q63HB4|ISPD_BACCZ 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus cereus (strain ZK / E33L) GN=ispD PE=3 SV=1
Length = 226
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 111/199 (55%), Gaps = 4/199 (2%)
Query: 12 PIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LKFSLPGKERQDSVYSG 69
PI +++ F + K I++ + FEE +K V+ ++F G ERQDSVY+
Sbjct: 30 PIIVHTLRAFEKDKACKNIIMAINEEERPYFEELMQKYPVEKPVQFIQGGAERQDSVYNA 89
Query: 70 LQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVR 129
+Q + E V +HD ARP V +K +Q VL A + GA++ VP K T+K+ + VV
Sbjct: 90 IQHTT-DVEYVLVHDGARPFVTNKVIQDVLTAAEKYGASICAVPVKDTVKKVE-QGVVVE 147
Query: 130 TLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIK 189
T++R L +QTPQ LL + + TDD S+VE + V + EGSY NIK
Sbjct: 148 TVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCFLGTDDASLVERIGKQVGVVEGSYYNIK 207
Query: 190 VTTPDDLLIAERILNLSSE 208
VTTP+DLLIAE L++ +
Sbjct: 208 VTTPEDLLIAESFLHVQKK 226
>sp|Q81VV5|ISPD_BACAN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus anthracis GN=ispD PE=3 SV=1
Length = 226
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 111/199 (55%), Gaps = 4/199 (2%)
Query: 12 PIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LKFSLPGKERQDSVYSG 69
PI +++ F + K I++ + FEE +K V+ ++F G ERQDSVY+
Sbjct: 30 PIIVHTLRAFEKDKACKNIIMAINEEERPYFEELMQKYPVEKPVQFIQGGAERQDSVYNA 89
Query: 70 LQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVR 129
+Q + E V +HD ARP V +K +Q VL A + GA++ VP K T+K+ + VV
Sbjct: 90 IQHTT-DVEYVLVHDGARPFVTNKVIQDVLTAAEKYGASICAVPVKDTVKKVE-QGVVVE 147
Query: 130 TLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIK 189
T++R L +QTPQ LL + + TDD S+VE + V + EGSY NIK
Sbjct: 148 TVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCFLGTDDASLVERIGKQVGVVEGSYYNIK 207
Query: 190 VTTPDDLLIAERILNLSSE 208
VTTP+DLLIAE L++ +
Sbjct: 208 VTTPEDLLIAESFLHVQKK 226
>sp|A0R8F7|ISPD_BACAH 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus thuringiensis (strain Al Hakam) GN=ispD PE=3
SV=1
Length = 226
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 111/199 (55%), Gaps = 4/199 (2%)
Query: 12 PIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LKFSLPGKERQDSVYSG 69
PI +++ F + K I++ + FEE +K V+ ++F G ERQDSVY+
Sbjct: 30 PIIVHTLRAFEKDKACKNIIMAINEEERPYFEELMQKYPVEKPVQFIQGGAERQDSVYNA 89
Query: 70 LQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVR 129
+Q + E V +HD ARP V +K +Q VL A + GA++ VP K T+K+ + VV
Sbjct: 90 IQHTT-DVEYVLVHDGARPFVTNKVIQDVLTAAEKYGASICAVPVKDTVKKVE-QGVVVE 147
Query: 130 TLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIK 189
T++R L +QTPQ LL + + TDD S+VE + V + EGSY NIK
Sbjct: 148 TVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCFLGTDDASLVERIGKQVGVVEGSYYNIK 207
Query: 190 VTTPDDLLIAERILNLSSE 208
VTTP+DLLIAE L++ +
Sbjct: 208 VTTPEDLLIAESFLHVQKK 226
>sp|Q67JP5|ISPD_SYMTH 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Symbiobacterium thermophilum (strain T / IAM 14863)
GN=ispD PE=3 SV=1
Length = 236
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 108/197 (54%), Gaps = 8/197 (4%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSL---PG 59
KQ+LPL G+P+ + + FS V EIV+ + D+ E T+ + K + G
Sbjct: 31 KQFLPLRGEPVLVRTVRRFSECPLVDEIVI----AAGDV-EATRALVGHMPKVTRIVQGG 85
Query: 60 KERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK 119
ERQDSV++ LQ V +V +HD+ARPL+ + ++ VL A A V+ VP + TIK
Sbjct: 86 AERQDSVWAALQAVHSRPRIVAVHDAARPLLTADVLKGVLQAAADHPAQVVAVPVQDTIK 145
Query: 120 EANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVY 179
+ + VV T DR LW +QTPQV D+L + F +G TDD S+VE + PV
Sbjct: 146 QVGPDGVVVATPDRSMLWAVQTPQVFWADVLVRAFRQAIADGFLGTDDASLVERIGVPVR 205
Query: 180 ITEGSYTNIKVTTPDDL 196
+ G N+K+TTP D
Sbjct: 206 VYRGHPGNLKLTTPTDF 222
>sp|Q73FC1|ISPD_BACC1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus cereus (strain ATCC 10987) GN=ispD PE=3 SV=1
Length = 226
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 110/199 (55%), Gaps = 4/199 (2%)
Query: 12 PIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LKFSLPGKERQDSVYSG 69
PI +++ F + K I++ + FEE +K V ++F G ERQDSVY+
Sbjct: 30 PIIVHTLRAFEKDKACKNIIMAINEEERPYFEELMQKYPVKKPVQFIQGGAERQDSVYNA 89
Query: 70 LQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVR 129
+Q + E V +HD ARP V +K +Q VL A + GA++ VP K T+K+ + VV
Sbjct: 90 IQHTS-DVEYVLVHDGARPFVTNKVIQDVLTAAEKYGASICAVPVKDTVKKVE-QGVVVE 147
Query: 130 TLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIK 189
T++R L +QTPQ LL + + TDD S+VE + V + EGSY NIK
Sbjct: 148 TVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCFLGTDDASLVERIGKQVGVVEGSYYNIK 207
Query: 190 VTTPDDLLIAERILNLSSE 208
VTTP+DLLIAE L++ +
Sbjct: 208 VTTPEDLLIAESFLHVQKK 226
>sp|A6LPN9|ISPD_CLOB8 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB
8052) GN=ispD PE=3 SV=1
Length = 226
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 114/201 (56%), Gaps = 5/201 (2%)
Query: 3 KQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE---TKEKINVDLKFSLPG 59
KQY+ L G PI Y+ F + +I++V D + K + +D S G
Sbjct: 21 KQYIDLNGAPILYYTLKQFIENDLIDKIILVVPEDEKDYCKREVLNKYGLKIDDLVS-GG 79
Query: 60 KERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK 119
ERQ+SVY+ L++++ S++V IHD ARP V K + + A R AA GV K TIK
Sbjct: 80 NERQESVYNALEKLE-KSDIVLIHDGARPFVSQKIINYAVEYAKRYKAAAPGVMPKDTIK 138
Query: 120 EANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVY 179
+S +F V TL R L +QTPQ +L+ + + + + + VTDD S+VE L H VY
Sbjct: 139 IKDSNNFSVDTLVRSELVAIQTPQAFDFNLIYECHKEIKKRCISVTDDTSVVELLGHKVY 198
Query: 180 ITEGSYTNIKVTTPDDLLIAE 200
I EG Y NIK+TTP+DL++AE
Sbjct: 199 IYEGDYKNIKITTPEDLILAE 219
>sp|A7GJZ7|ISPD_BACCN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98)
GN=ispD PE=3 SV=1
Length = 226
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 113/196 (57%), Gaps = 4/196 (2%)
Query: 12 PIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINV--DLKFSLPGKERQDSVYSG 69
PI +++ F + ++I++ + FE +K + +++F G ERQDSVY
Sbjct: 30 PIIVHTLRAFEKDEACEKIIMAINEQERSDFEALIQKYGIRKNVQFIQGGAERQDSVYHA 89
Query: 70 LQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVR 129
LQ V +E V +HD ARP V +K + +VL+ A GA++ VP K TIK+ +++ V
Sbjct: 90 LQYVK-ETEYVLVHDGARPFVTNKMIHEVLIVAKEKGASICAVPVKDTIKKVVNDA-VFE 147
Query: 130 TLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIK 189
T++R L +QTPQ LL + + + G TDD S+VE + V + EGSY NIK
Sbjct: 148 TVERSQLRAVQTPQGFSVALLLEAHQSAKQSGFLGTDDASLVERIGKEVGVVEGSYYNIK 207
Query: 190 VTTPDDLLIAERILNL 205
VTTP+DLLIAE L++
Sbjct: 208 VTTPEDLLIAESFLHV 223
>sp|Q81J63|ISPD_BACCR 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=ispD
PE=3 SV=1
Length = 226
Score = 124 bits (311), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 108/196 (55%), Gaps = 4/196 (2%)
Query: 12 PIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVD--LKFSLPGKERQDSVYSG 69
PI +++ F + K I++ + FEE +K ++ ++F G ERQDSVY+
Sbjct: 30 PIIVHTLRAFEKDKACKSIIMAINEEERPYFEELMQKYQIEKHVQFIQGGAERQDSVYNA 89
Query: 70 LQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVR 129
LQ E V +HD ARP V +K ++ VL A + GA++ VP K T+K+ + VV
Sbjct: 90 LQYAS-GVEYVLVHDGARPFVTNKVIRDVLTAAEKYGASICAVPVKDTVKKVE-QGVVVE 147
Query: 130 TLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIK 189
T++R L +QTPQ LL + + TDD S+VE + V + EGSY NIK
Sbjct: 148 TVERSQLNAVQTPQGFSVSLLLEAHRSAKQSCFLGTDDASLVERVGKQVGVVEGSYYNIK 207
Query: 190 VTTPDDLLIAERILNL 205
VTTP+DLLIAE L +
Sbjct: 208 VTTPEDLLIAESFLRV 223
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,079,058
Number of Sequences: 539616
Number of extensions: 3005513
Number of successful extensions: 9576
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 8241
Number of HSP's gapped (non-prelim): 522
length of query: 210
length of database: 191,569,459
effective HSP length: 112
effective length of query: 98
effective length of database: 131,132,467
effective search space: 12850981766
effective search space used: 12850981766
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)