BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028325
MLKSIVAGSCSVPLRLESKDNLNAGACFSDTTRSASVACCSSSSRTNAYNVPKLEPFSRT
KLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQS
GGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSRPVPDGLPKTLEELEEEERA
RMPDSPYTRLLRAKGRLPAWYSLAPDHETD

High Scoring Gene Products

Symbol, full name Information P value
MEE14
AT2G15890 		protein from Arabidopsis thaliana 1.6e-38

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028325
        (210 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2044556 - symbol:MEE14 "AT2G15890" species:370...   412  1.6e-38   1


>TAIR|locus:2044556 [details] [associations]
            symbol:MEE14 "AT2G15890" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0009793 "embryo development ending in
            seed dormancy" evidence=IMP] [GO:0009507 "chloroplast"
            evidence=IDA] [GO:0050832 "defense response to fungus"
            evidence=IEP] GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0050832 GO:GO:0009793 EMBL:AC006438 EMBL:AF324713
            EMBL:AF339730 EMBL:AY065086 EMBL:AY086954 EMBL:BT008445
            IPI:IPI00534554 PIR:D84534 RefSeq:NP_565383.1 UniGene:At.25063
            STRING:Q9XIM0 PRIDE:Q9XIM0 EnsemblPlants:AT2G15890.1 GeneID:816085
            KEGG:ath:AT2G15890 TAIR:At2g15890 HOGENOM:HOG000240437
            InParanoid:Q9XIM0 OMA:TLEGDDS PhylomeDB:Q9XIM0
            ProtClustDB:CLSN2688146 ArrayExpress:Q9XIM0 Genevestigator:Q9XIM0
            Uniprot:Q9XIM0
        Length = 203

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 83/163 (50%), Positives = 110/163 (67%)

Query:    50 NVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFXXXXXXXXXX 109
             +VPKLE FSR K +R +++P LIEK+E++L+DYCSTLEGDDSYSCWRAYF          
Sbjct:    42 DVPKLELFSRGKFDRILQDPPLIEKAESELSDYCSTLEGDDSYSCWRAYFELKDLEREKP 101

Query:   110 XXXXXXXXXQSGGVKSLIGCLHGISSIRKA-KT-DGFASEEKTLGSKRIESSSRPVPDGL 167
                      Q+GG+KSLIGCLHG++S+ K  KT +G    E++   K +      +PDGL
Sbjct:   102 KVEVENLILQTGGLKSLIGCLHGVASMEKDNKTKNGLHVGEESDREKGMNLHIH-IPDGL 160

Query:   168 PKTXXXXXXXXRARMPDSPYTRLLRAKGRLPAWYSLAPDHETD 210
             PK+        +++MPDS +TRLLR+KG +PAW+S APDHETD
Sbjct:   161 PKSEQELEEEEKSKMPDSAFTRLLRSKGTIPAWFSHAPDHETD 203


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.130   0.386    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      210       172   0.00093  108 3  11 23  0.46    32
                                                     31  0.48    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  578 (61 KB)
  Total size of DFA:  148 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.38u 0.18s 14.56t   Elapsed:  00:00:01
  Total cpu time:  14.38u 0.18s 14.56t   Elapsed:  00:00:01
  Start:  Fri May 10 14:14:57 2013   End:  Fri May 10 14:14:58 2013

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