Your job contains 1 sequence.
>028326
MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDIC
QETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPADPGASSSSIKS
LSGENILDTKSHSLSRRDALMPVAAECKEVLPASSGGVGGFAMNKVSFAGGSAAGSTPSW
HMDDFLALPELNQNYSFMDNGSSKWQAWRL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028326
(210 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2061330 - symbol:STH "salt tolerance homologue... 373 1.5e-37 2
TAIR|locus:2198841 - symbol:STO "SALT TOLERANCE" species:... 401 2.4e-37 1
TAIR|locus:2005624 - symbol:BBX21 "B-box domain protein 2... 367 9.5e-34 1
TAIR|locus:2122759 - symbol:bbx23 "B-box domain protein 2... 343 3.3e-31 1
TAIR|locus:2120207 - symbol:BZS1 "BZS1" species:3702 "Ara... 340 6.9e-31 1
TAIR|locus:2050130 - symbol:BBX18 "B-box domain protein 1... 272 1.1e-23 1
TAIR|locus:2047246 - symbol:COL3 "CONSTANS-like 3" specie... 201 3.7e-16 1
TAIR|locus:2143221 - symbol:COL1 "CONSTANS-like 1" specie... 202 7.0e-16 1
UNIPROTKB|Q9FRZ7 - symbol:Hd1 "Hd1 protein" species:39946... 195 3.7e-15 1
TAIR|locus:2074587 - symbol:COL2 "CONSTANS-like 2" specie... 195 3.9e-15 1
UNIPROTKB|Q9FRZ6 - symbol:Q9FRZ6 "Hd1" species:4530 "Oryz... 187 1.1e-14 1
UNIPROTKB|Q9FE92 - symbol:Hd1 "Heading day 1" species:453... 187 5.2e-14 1
TAIR|locus:2143206 - symbol:CO "CONSTANS" species:3702 "A... 184 8.6e-14 1
TAIR|locus:2043288 - symbol:AT2G47890 species:3702 "Arabi... 178 2.7e-13 1
UNIPROTKB|Q9FDX8 - symbol:HD1 "Zinc finger protein HD1" s... 178 4.6e-13 1
TAIR|locus:2010504 - symbol:BBX13 "B-box domain protein 1... 156 1.4e-10 1
TAIR|locus:2172545 - symbol:COL5 "CONSTANS-like 5" specie... 152 2.6e-10 1
TAIR|locus:2051104 - symbol:BBX12 "B-box domain protein 1... 151 4.3e-10 1
TAIR|locus:2199262 - symbol:BBX27 "B-box domain protein 2... 145 6.1e-09 1
TAIR|locus:2164718 - symbol:BBX8 "B-box domain protein 8"... 135 3.7e-07 1
TAIR|locus:2131709 - symbol:BBX28 "B-box domain protein 2... 127 1.1e-06 1
TAIR|locus:2091082 - symbol:COL9 "CONSTANS-like 9" specie... 131 1.3e-06 1
TAIR|locus:2147274 - symbol:BBX29 "B-box domain protein 2... 125 1.8e-06 1
TAIR|locus:2095562 - symbol:BBX31 "B-box domain protein 3... 106 7.4e-06 1
TAIR|locus:2201277 - symbol:BBX14 "B-box domain protein 1... 123 1.7e-05 1
TAIR|locus:2129860 - symbol:BBX9 "B-box domain protein 9"... 121 2.0e-05 1
TAIR|locus:2031180 - symbol:BBX15 "B-box domain protein 1... 122 2.3e-05 1
TAIR|locus:2031581 - symbol:BBX16 "B-box domain protein 1... 119 4.9e-05 1
TAIR|locus:1009023318 - symbol:BBX30 "B-box domain protei... 95 0.00014 1
TAIR|locus:2028421 - symbol:BBX17 "B-box domain protein 1... 111 0.00033 1
ZFIN|ZDB-GENE-030131-5695 - symbol:trim33l "tripartite mo... 116 0.00055 1
TAIR|locus:2088748 - symbol:BBX10 "B-box domain protein 1... 109 0.00071 1
>TAIR|locus:2061330 [details] [associations]
symbol:STH "salt tolerance homologue" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0019904 "protein domain specific binding"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0010224 "response to UV-B"
evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AC007169 HOGENOM:HOG000239240 UniGene:At.24192
UniGene:At.69838 EMBL:AF323666 EMBL:AF325077 EMBL:AF370311
EMBL:AY063097 IPI:IPI00545007 PIR:A84720 RefSeq:NP_565722.1
ProteinModelPortal:Q9SID1 SMR:Q9SID1 IntAct:Q9SID1 STRING:Q9SID1
EnsemblPlants:AT2G31380.1 GeneID:817696 KEGG:ath:AT2G31380
TAIR:At2g31380 eggNOG:NOG279894 InParanoid:Q9SID1 OMA:CAKCDVE
PhylomeDB:Q9SID1 ProtClustDB:CLSN2682276 Genevestigator:Q9SID1
GermOnline:AT2G31380 Uniprot:Q9SID1
Length = 238
Score = 373 (136.4 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 68/106 (64%), Positives = 83/106 (78%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDIC 60
M+IQC+VCE A A ++CCADEAALC +CD +VHAANKLASKHQR+ L S ST+ P CDIC
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60
Query: 61 QETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVAL 106
E + F FC++DRALLCR CD A H N+ + HQRFL TG++VAL
Sbjct: 61 LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVAL 106
Score = 135 (52.6 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 22/55 (40%), Positives = 28/55 (50%)
Query: 56 KCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPAD 110
+CD+C++ C D A LC KCDV +H AN S HQR L + P D
Sbjct: 4 QCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCD 58
Score = 46 (21.3 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 174 AGSTPSWHMDDFLALPEL---NQNYSFMDNGSSKWQA 207
A +P W D+F + +L N+ +D G W A
Sbjct: 137 AAPSPLWATDEFFSYSDLDCSNKEKEQLDLGELDWLA 173
>TAIR|locus:2198841 [details] [associations]
symbol:STO "SALT TOLERANCE" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009416 "response to light stimulus"
evidence=IEP] [GO:0009640 "photomorphogenesis" evidence=IGI]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009651
"response to salt stress" evidence=IGI;RCA] [GO:0009737 "response
to abscisic acid stimulus" evidence=RCA] [GO:0046686 "response to
cadmium ion" evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0009651 GO:GO:0008270 GO:GO:0003700
GO:GO:0080167 GO:GO:0009640 EMBL:AC024174 HOGENOM:HOG000239240
ProtClustDB:CLSN2682276 EMBL:X95572 EMBL:AY079377 EMBL:AY045794
IPI:IPI00518701 PIR:E86195 RefSeq:NP_172094.1 UniGene:At.23289
UniGene:At.38035 UniGene:At.70752 ProteinModelPortal:Q96288
SMR:Q96288 IntAct:Q96288 MINT:MINT-189223 STRING:Q96288
EnsemblPlants:AT1G06040.1 GeneID:837113 KEGG:ath:AT1G06040
TAIR:At1g06040 eggNOG:NOG313367 InParanoid:Q96288 OMA:PRCDICQ
PhylomeDB:Q96288 Genevestigator:Q96288 Uniprot:Q96288
Length = 248
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 72/106 (67%), Positives = 88/106 (83%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDIC 60
M+IQC+VCE A A V+CCADEAALC +CD ++HAANKLASKHQR+ L+S ST+ P+CDIC
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 61 QETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVAL 106
QE + F FC++DRALLCR CD +IH ANS + HQRFL TG+KVAL
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVAL 106
Score = 118 (46.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 56 KCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPAD 110
+CD+C++ C D A LC +CD+ IH AN S HQR L + D
Sbjct: 4 QCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCD 58
>TAIR|locus:2005624 [details] [associations]
symbol:BBX21 "B-box domain protein 21" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009641 "shade avoidance"
evidence=IGI;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 GO:GO:0009641 HOGENOM:HOG000239240 EMBL:AC006434
EMBL:AB493536 IPI:IPI00536705 PIR:G96785 RefSeq:NP_177686.1
UniGene:At.34761 UniGene:At.69592 ProteinModelPortal:Q9LQZ7
SMR:Q9LQZ7 IntAct:Q9LQZ7 STRING:Q9LQZ7 EnsemblPlants:AT1G75540.1
GeneID:843890 KEGG:ath:AT1G75540 TAIR:At1g75540 eggNOG:NOG315170
InParanoid:Q9LQZ7 OMA:CDICQDK PhylomeDB:Q9LQZ7
ProtClustDB:CLSN2682536 Genevestigator:Q9LQZ7 GermOnline:AT1G75540
Uniprot:Q9LQZ7
Length = 331
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 83/212 (39%), Positives = 113/212 (53%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPL---SSSSTQMPKC 57
M+I+C+VC+ EA V C ADEA+LC CD +VH ANKLASKH R L SSS+T P C
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60
Query: 58 DICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPADPGAXXXX 117
DICQ+ FC QDRA+LC+ CD +IH AN + H RFLLTGVK++ +
Sbjct: 61 DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120
Query: 118 XXXXXGENILDTKSHSLSRRDALM-PVAA--ECKEVLPASSGGVGGFAMNK---VSFAGG 171
S+S L P++A + ++ P S G ++N+ S
Sbjct: 121 SSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWGSTSTISE 180
Query: 172 SAAGSTPSWHMDDFL--ALPELNQNYSFMDNG 201
+ P WH++DFL +LP + S D+G
Sbjct: 181 YLMDTLPGWHVEDFLDSSLPTYGFSKSGDDDG 212
>TAIR|locus:2122759 [details] [associations]
symbol:bbx23 "B-box domain protein 23" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008270 GO:GO:0003700
GO:GO:0005622 EMBL:AF096373 EMBL:AL161516 HOGENOM:HOG000239240
EMBL:AL049488 EMBL:AY122916 IPI:IPI00525768 PIR:T01973
RefSeq:NP_192762.1 UniGene:At.33641 ProteinModelPortal:O82617
SMR:O82617 EnsemblPlants:AT4G10240.1 GeneID:826615
KEGG:ath:AT4G10240 TAIR:At4g10240 eggNOG:NOG273282
InParanoid:O82617 OMA:TENSECS PhylomeDB:O82617
ProtClustDB:CLSN2915973 Genevestigator:O82617 Uniprot:O82617
Length = 162
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 68/111 (61%), Positives = 81/111 (72%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPL---SSSSTQM--- 54
M+IQC VCE AEA+VLCC+DEA LC CD KVH ANKL +H RV L ++S+T
Sbjct: 1 MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA 60
Query: 55 PKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVA 105
P CDICQE G+FFCL+DRA+LC CD AIHT NS HQRFLL+GV+V+
Sbjct: 61 PLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCNS----HQRFLLSGVQVS 107
>TAIR|locus:2120207 [details] [associations]
symbol:BZS1 "BZS1" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0080167 "response to karrikin" evidence=IEP]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IEP]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0080167
GO:GO:0010200 EMBL:AL035679 EMBL:AL161594 EMBL:AK118879
EMBL:BT028893 IPI:IPI00535007 PIR:T06067 RefSeq:NP_195618.2
UniGene:At.31120 ProteinModelPortal:Q0IGM7 SMR:Q0IGM7 PRIDE:Q0IGM7
EnsemblPlants:AT4G39070.1 GeneID:830062 KEGG:ath:AT4G39070
TAIR:At4g39070 eggNOG:NOG257043 HOGENOM:HOG000239240
InParanoid:Q0IGM7 OMA:DICGERR PhylomeDB:Q0IGM7
ProtClustDB:CLSN2915067 Genevestigator:Q0IGM7 GO:GO:0009741
Uniprot:Q0IGM7
Length = 242
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 91/219 (41%), Positives = 112/219 (51%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQ-MPKCDI 59
M+I C VC+ EA V CCADEAALC CD VH ANKLA KH R L+S + + P CDI
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60
Query: 60 CQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEP-ADPGAXXXXX 118
C E FC +DRA+LCR+CD+ IH AN + H RFLLTGVK++ P A P A
Sbjct: 61 CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS 120
Query: 119 XXXXGENILDTKSHSLSRRDALMPVAAECKEVLPASSGGVG-----GFAMN--KVSFAG- 170
G T+ S+S +P +A EV +SS G N VS +G
Sbjct: 121 AAAFGR--AKTRPKSVSSE---VPSSAS-NEVFTSSSSTTTSNCYYGIEENYHHVSDSGS 174
Query: 171 GSAA-GST--------PSWHMDDFLALPELNQNYSFMDN 200
GS GS P W ++D L P S+ DN
Sbjct: 175 GSGCTGSISEYLMETLPGWRVEDLLEHPSC---VSYEDN 210
>TAIR|locus:2050130 [details] [associations]
symbol:BBX18 "B-box domain protein 18" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010264 "myo-inositol hexakisphosphate biosynthetic process"
evidence=RCA] InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119
SMART:SM00336 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008270
EMBL:AC006841 GO:GO:0003700 GO:GO:0005622 HOGENOM:HOG000239240
EMBL:AY060570 EMBL:AY125573 IPI:IPI00525924 PIR:H84599
RefSeq:NP_565507.1 UniGene:At.27367 ProteinModelPortal:Q9SJU5
SMR:Q9SJU5 STRING:Q9SJU5 EnsemblPlants:AT2G21320.1 GeneID:816671
KEGG:ath:AT2G21320 TAIR:At2g21320 eggNOG:NOG329451
InParanoid:Q9SJU5 OMA:KCNKLAS PhylomeDB:Q9SJU5
ProtClustDB:CLSN2914972 ArrayExpress:Q9SJU5 Genevestigator:Q9SJU5
Uniprot:Q9SJU5
Length = 172
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 53/110 (48%), Positives = 67/110 (60%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDIC 60
MRI C+ CE+A A V C ADEAALC CD+KVH NKLAS+H RV L+ S P CDIC
Sbjct: 1 MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNA-PSCDIC 59
Query: 61 QETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPAD 110
+ FF+C D + LC +CD+ +H H+RFLL ++ P D
Sbjct: 60 ENAPAFFYCEIDGSSLCLQCDMVVHVGGK--RTHRRFLLLRQRIEF-PGD 106
>TAIR|locus:2047246 [details] [associations]
symbol:COL3 "CONSTANS-like 3" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010099 "regulation of
photomorphogenesis" evidence=IMP] [GO:0010161 "red light signaling
pathway" evidence=IMP] [GO:0009637 "response to blue light"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0010218 "response to far red light" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC006585 EMBL:AC007266 GO:GO:0010161
GO:GO:0010099 HOGENOM:HOG000238833 EMBL:AY058130 EMBL:AY140103
EMBL:BT002107 EMBL:AY085729 IPI:IPI00519735 PIR:E84640
RefSeq:NP_180052.1 UniGene:At.24362 ProteinModelPortal:Q9SK53
IntAct:Q9SK53 STRING:Q9SK53 EnsemblPlants:AT2G24790.1 GeneID:817016
KEGG:ath:AT2G24790 TAIR:At2g24790 eggNOG:NOG277018
InParanoid:Q9SK53 OMA:TDSREND PhylomeDB:Q9SK53
ProtClustDB:CLSN2912944 Genevestigator:Q9SK53 Uniprot:Q9SK53
Length = 294
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 42/105 (40%), Positives = 58/105 (55%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C++ A + C AD A LC +CD K+H ANKLAS+H+RV L C++C++
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAP 58
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPA 109
C D A LC CD IH+AN H+R +T A+ PA
Sbjct: 59 AHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPA 103
Score = 131 (51.2 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 45/135 (33%), Positives = 56/135 (41%)
Query: 49 SSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEP 108
+SS+++ CD C+ T+ FC D A LC CD IHTAN S H+R L V E
Sbjct: 2 ASSSRL--CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEV---CEQ 56
Query: 109 ADPGAXXXXXXXXXGENILDTKSHS---LSRRDALMPVAAECKEVLPASSGGVGGFAMNK 165
A P D HS LSRR +P+ V PA S A +
Sbjct: 57 A-PAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKS------ASSS 109
Query: 166 VSFAGGSAAGSTPSW 180
V+F T SW
Sbjct: 110 VNFVDEDGGDVTASW 124
>TAIR|locus:2143221 [details] [associations]
symbol:COL1 "CONSTANS-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0009909
EMBL:AL391144 EMBL:Y10555 EMBL:Y10556 EMBL:AY074369 EMBL:BT002363
IPI:IPI00520338 PIR:T51414 RefSeq:NP_197089.1 UniGene:At.24486
UniGene:At.48027 IntAct:O50055 STRING:O50055
EnsemblPlants:AT5G15850.1 GeneID:831442 KEGG:ath:AT5G15850
TAIR:At5g15850 eggNOG:NOG314154 HOGENOM:HOG000238833
InParanoid:O50055 OMA:QSCERAP PhylomeDB:O50055
ProtClustDB:CLSN2685199 Genevestigator:O50055 GermOnline:AT5G15850
Uniprot:O50055
Length = 355
Score = 202 (76.2 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 41/92 (44%), Positives = 50/92 (54%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C +A V C AD A LC CD +VHAAN+LAS+H+RV + C C+
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV---------CQSCERAP 62
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 96
FFC D A LC CD IH+AN HQR
Sbjct: 63 AAFFCKADAASLCTTCDSEIHSANPLARRHQR 94
Score = 132 (51.5 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPL 47
C CE A A C AD A+LC CD ++H+AN LA +HQRVP+
Sbjct: 55 CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPI 97
>UNIPROTKB|Q9FRZ7 [details] [associations]
symbol:Hd1 "Hd1 protein" species:39946 "Oryza sativa Indica
Group" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0010229 GO:GO:0048571
GO:GO:0048572 EMBL:AB041839 EMBL:AB564434 Gramene:Q9FRZ7
Uniprot:Q9FRZ7
Length = 342
Score = 195 (73.7 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 41/105 (39%), Positives = 56/105 (53%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C AA + V C AD A LC CD +VHAAN++AS+H+RV + C+ C++
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV---------CEACEQAP 85
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPA 109
C D A LC CDV +H+AN HQR + + PA
Sbjct: 86 AALACRADAAALCVACDVQVHSANPLARRHQRVPVAPLPAITIPA 130
Score = 114 (45.2 bits), Expect = 0.00016, P = 0.00016
Identities = 34/102 (33%), Positives = 43/102 (42%)
Query: 57 CDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPADPGAXXX 116
CD C+ +C D A LC CD +H AN S H+R V A E A P A
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHER---VRVCEACEQA-PAALAC 90
Query: 117 XXXXXXGENILDTKSHS---LSRRDALMPVAAECKEVLPASS 155
D + HS L+RR +PVA +PA+S
Sbjct: 91 RADAAALCVACDVQVHSANPLARRHQRVPVAPLPAITIPATS 132
>TAIR|locus:2074587 [details] [associations]
symbol:COL2 "CONSTANS-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:AC021640
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677
EMBL:AC068900 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009658 GO:GO:0009909 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:L81120 EMBL:L81119 EMBL:AF370149
EMBL:AY059092 EMBL:AY088779 IPI:IPI00518847 RefSeq:NP_186887.1
UniGene:At.10373 IntAct:Q96502 STRING:Q96502
EnsemblPlants:AT3G02380.1 GeneID:821298 KEGG:ath:AT3G02380
TAIR:At3g02380 eggNOG:NOG281690 InParanoid:Q96502 OMA:RVCEACE
PhylomeDB:Q96502 Genevestigator:Q96502 GermOnline:AT3G02380
Uniprot:Q96502
Length = 347
Score = 195 (73.7 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 39/92 (42%), Positives = 49/92 (53%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C +A V C AD A LC CD +VHAAN++AS+H+RV + C C+
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV---------CQSCESAP 66
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 96
F C D A LC CD IH+AN HQR
Sbjct: 67 AAFLCKADAASLCTACDAEIHSANPLARRHQR 98
Score = 136 (52.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPL 47
C CE+A A LC AD A+LC CD ++H+AN LA +HQRVP+
Sbjct: 59 CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPI 101
Score = 110 (43.8 bits), Expect = 0.00049, P = 0.00049
Identities = 33/115 (28%), Positives = 47/115 (40%)
Query: 48 SSSSTQMPKCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALE 107
+ S T CD C+ + +C D A LC CD +H AN S H+R V + E
Sbjct: 7 NESGTWARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHER---VRVCQSCE 63
Query: 108 PADPGAXXXXXXXXXGENILDTKSHS---LSRRDALMPV----AAECKEVLPASS 155
A P A D + HS L+RR +P+ A C + P+ +
Sbjct: 64 SA-PAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAPSET 117
>UNIPROTKB|Q9FRZ6 [details] [associations]
symbol:Q9FRZ6 "Hd1" species:4530 "Oryza sativa" [GO:0003677
"DNA binding" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0010229 "inflorescence development" evidence=IGI]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] InterPro:IPR000315
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0010229 GO:GO:0048571
GO:GO:0048572 EMBL:AB041841 Gramene:Q9FRZ6 Genevestigator:Q9FRZ6
Uniprot:Q9FRZ6
Length = 259
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 40/105 (38%), Positives = 55/105 (52%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C AA + V C AD A LC CD +VHAAN++AS+H+RV + C+ C+
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV---------CEACERAP 85
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPA 109
C D A LC CDV +++AN HQR + + PA
Sbjct: 86 AALACRADAAALCVACDVQVYSANPLARRHQRVPVAPLPAITIPA 130
Score = 107 (42.7 bits), Expect = 0.00063, P = 0.00063
Identities = 33/102 (32%), Positives = 43/102 (42%)
Query: 57 CDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPADPGAXXX 116
CD C+ +C D A LC CD +H AN S H+R V A E A P A
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHER---VRVCEACERA-PAALAC 90
Query: 117 XXXXXXGENILDTKSHS---LSRRDALMPVAAECKEVLPASS 155
D + +S L+RR +PVA +PA+S
Sbjct: 91 RADAAALCVACDVQVYSANPLARRHQRVPVAPLPAITIPATS 132
>UNIPROTKB|Q9FE92 [details] [associations]
symbol:Hd1 "Heading day 1" species:4530 "Oryza sativa"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0009909 GO:GO:0010229 GO:GO:0048571 GO:GO:0048572
EMBL:JN402207 EMBL:AB041840 EMBL:AB041842 Gramene:Q9FE92
Genevestigator:Q9FE92 Uniprot:Q9FE92
Length = 407
Score = 187 (70.9 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 40/105 (38%), Positives = 55/105 (52%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C AA + V C AD A LC CD +VHAAN++AS+H+RV + C+ C+
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV---------CEACERAP 85
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEPA 109
C D A LC CDV +++AN HQR + + PA
Sbjct: 86 AALACRADAAALCVACDVQVYSANPLARRHQRVPVAPLPAITIPA 130
>TAIR|locus:2143206 [details] [associations]
symbol:CO "CONSTANS" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;NAS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IGI] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010018 "far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009908 GO:GO:0009909 EMBL:AL391144 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:X94937 EMBL:BT001926 EMBL:AY086574
IPI:IPI00535908 IPI:IPI00657421 PIR:A56133 RefSeq:NP_001031887.1
RefSeq:NP_197088.1 UniGene:At.18 IntAct:Q39057 MINT:MINT-6608985
STRING:Q39057 EnsemblPlants:AT5G15840.1 GeneID:831441
KEGG:ath:AT5G15840 TAIR:At5g15840 eggNOG:NOG306777
InParanoid:Q39057 KO:K12135 OMA:CHADSAY PhylomeDB:Q39057
Genevestigator:Q39057 GO:GO:0010018 Uniprot:Q39057
Length = 373
Score = 184 (69.8 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 36/92 (39%), Positives = 49/92 (53%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C + V C AD A LC CD +VH+AN++AS+H+RV + C+ C+
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV---------CESCERAP 70
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 96
F C D A LC CD +H+AN HQR
Sbjct: 71 AAFLCEADDASLCTACDSEVHSANPLARRHQR 102
Score = 139 (54.0 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPL 47
C CE A A LC AD+A+LC CD +VH+AN LA +HQRVP+
Sbjct: 63 CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPI 105
>TAIR|locus:2043288 [details] [associations]
symbol:AT2G47890 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009805 "coumarin biosynthetic process"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AC005309 EMBL:AC006072 EMBL:BT023413 IPI:IPI00543399
PIR:G84920 RefSeq:NP_182310.1 UniGene:At.12948 STRING:O82256
EnsemblPlants:AT2G47890.1 GeneID:819401 KEGG:ath:AT2G47890
TAIR:At2g47890 eggNOG:NOG271369 HOGENOM:HOG000240051
InParanoid:O82256 OMA:CSRHARA PhylomeDB:O82256
ProtClustDB:CLSN2683730 Genevestigator:O82256 Uniprot:O82256
Length = 332
Score = 178 (67.7 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 39/92 (42%), Positives = 52/92 (56%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C+++ A V C AD A LC CD +VH AN+L +KH R L CD C E+
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL---------CDSCNESP 63
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 96
FC +R++LC+ CD HTA+S S H R
Sbjct: 64 SSLFCETERSVLCQNCDWQHHTASS--SLHSR 93
>UNIPROTKB|Q9FDX8 [details] [associations]
symbol:HD1 "Zinc finger protein HD1" species:39947 "Oryza
sativa Japonica Group" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0045892 GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 EMBL:AP008212 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0009908 GO:GO:0009909 GO:GO:0010229
eggNOG:NOG281690 OMA:RVCEACE GO:GO:0048579 GO:GO:0048576
EMBL:AB041837 EMBL:AB041838 EMBL:AB375859 EMBL:AP003044
EMBL:AP005813 RefSeq:NP_001057378.1 UniGene:Os.1189 STRING:Q9FDX8
EnsemblPlants:LOC_Os06g16370.1 GeneID:4340746 KEGG:osa:4340746
Gramene:Q9FDX8 ProtClustDB:CLSN2696123 GO:GO:0048571 GO:GO:0048572
Uniprot:Q9FDX8
Length = 395
Score = 178 (67.7 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 36/84 (42%), Positives = 48/84 (57%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C AA + V C AD A LC CD +VHAAN++AS+H+RV + C+ C+
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRV---------CEACERAP 85
Query: 65 GFFFCLQDRALLCRKCDVAIHTAN 88
C D A LC CDV +H+AN
Sbjct: 86 AALACRADAAALCVACDVQVHSAN 109
>TAIR|locus:2010504 [details] [associations]
symbol:BBX13 "B-box domain protein 13" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017
SMART:SM00336 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AC069471
HOGENOM:HOG000243233 ProtClustDB:CLSN2713949 EMBL:AY037206
EMBL:BT002681 IPI:IPI00538865 PIR:B86406 RefSeq:NP_174126.1
UniGene:At.19754 ProteinModelPortal:Q9C7E8 SMR:Q9C7E8 IntAct:Q9C7E8
STRING:Q9C7E8 PRIDE:Q9C7E8 EnsemblPlants:AT1G28050.1 GeneID:839698
KEGG:ath:AT1G28050 TAIR:At1g28050 eggNOG:NOG245106
InParanoid:Q9C7E8 OMA:SCGRYKQ PhylomeDB:Q9C7E8
Genevestigator:Q9C7E8 GermOnline:AT1G28050 Uniprot:Q9C7E8
Length = 433
Score = 156 (60.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 36/100 (36%), Positives = 49/100 (49%)
Query: 2 RIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQ 61
R+ C+ C A + C AD A LC CD +VH AN L+ KH R +Q+ CD C
Sbjct: 6 RVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVR-------SQI--CDNCG 56
Query: 62 ETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTG 101
C D +LC++CD +H + S AH R + G
Sbjct: 57 NEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEG 96
>TAIR|locus:2172545 [details] [associations]
symbol:COL5 "CONSTANS-like 5" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042631 "cellular response to water deprivation" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB018118 HOGENOM:HOG000238833 EMBL:AY057632
EMBL:AY080747 EMBL:AY114006 EMBL:AY088432 IPI:IPI00531436
RefSeq:NP_568863.1 UniGene:At.20797 IntAct:Q9FHH8 STRING:Q9FHH8
PRIDE:Q9FHH8 EnsemblPlants:AT5G57660.1 GeneID:835872
KEGG:ath:AT5G57660 TAIR:At5g57660 eggNOG:NOG321782
InParanoid:Q9FHH8 OMA:YSSYTAT PhylomeDB:Q9FHH8
ProtClustDB:CLSN2917767 Genevestigator:Q9FHH8 GermOnline:AT5G57660
Uniprot:Q9FHH8
Length = 355
Score = 152 (58.6 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 31/92 (33%), Positives = 47/92 (51%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C+ C++ A V C D A LC CD ++H+ ++H+RV + C++C++
Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWV---------CEVCEQAP 68
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 96
C D A LC CD IH+AN S H+R
Sbjct: 69 AAVTCKADAAALCVSCDADIHSANPLASRHER 100
Score = 143 (55.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSS 49
C VCE A A V C AD AALC CD +H+AN LAS+H+RVP+ +
Sbjct: 61 CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVET 105
>TAIR|locus:2051104 [details] [associations]
symbol:BBX12 "B-box domain protein 12" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC002332 EMBL:BT002067 EMBL:AY128321
EMBL:BT006572 IPI:IPI00527026 IPI:IPI00539934 PIR:C84746
RefSeq:NP_850211.1 RefSeq:NP_973589.1 UniGene:At.43493
IntAct:O22800 STRING:O22800 EnsemblPlants:AT2G33500.1 GeneID:817915
KEGG:ath:AT2G33500 TAIR:At2g33500 eggNOG:NOG269245
HOGENOM:HOG000243233 InParanoid:O22800 OMA:ATHERSA PhylomeDB:O22800
ProtClustDB:CLSN2713949 Genevestigator:O22800 Uniprot:O22800
Length = 402
Score = 151 (58.2 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 34/99 (34%), Positives = 49/99 (49%)
Query: 3 IQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQE 62
+ C C A + C AD A LC CD VH+AN L+ KH R +Q+ CD C +
Sbjct: 10 VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVR-------SQI--CDNCSK 60
Query: 63 TSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTG 101
C D +LC++CD +H + S + H+R + G
Sbjct: 61 EPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEG 99
>TAIR|locus:2199262 [details] [associations]
symbol:BBX27 "B-box domain protein 27" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 PROSITE:PS50119 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC016447 EMBL:AK117800 IPI:IPI00522806
PIR:C96705 RefSeq:NP_176986.1 UniGene:At.35557
ProteinModelPortal:Q9C9F4 EnsemblPlants:AT1G68190.1 GeneID:843148
KEGG:ath:AT1G68190 TAIR:At1g68190 eggNOG:NOG293044
HOGENOM:HOG000111890 InParanoid:Q9C9F4 OMA:CIADTAN PhylomeDB:Q9C9F4
ProtClustDB:CLSN2717503 Genevestigator:Q9C9F4 GermOnline:AT1G68190
Uniprot:Q9C9F4
Length = 356
Score = 145 (56.1 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 34/92 (36%), Positives = 42/92 (45%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDICQETS 64
C C+A A V C AD A LC CD KVH+AN L+ +H R L CD C+
Sbjct: 14 CEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL---------CDSCKNQP 64
Query: 65 GFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 96
C + LC C+ H S S H+R
Sbjct: 65 CVVRCFDHKMFLCHGCNDKFHGGGS--SEHRR 94
>TAIR|locus:2164718 [details] [associations]
symbol:BBX8 "B-box domain protein 8" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005886 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB023039 EMBL:AY039957 EMBL:AY142607
IPI:IPI00527282 RefSeq:NP_199636.1 UniGene:At.7080
ProteinModelPortal:Q9LUA9 IntAct:Q9LUA9 STRING:Q9LUA9
EnsemblPlants:AT5G48250.1 GeneID:834878 KEGG:ath:AT5G48250
TAIR:At5g48250 eggNOG:NOG248444 HOGENOM:HOG000116529
InParanoid:Q9LUA9 OMA:ESACEQG PhylomeDB:Q9LUA9
ProtClustDB:CLSN2684850 Genevestigator:Q9LUA9 GermOnline:AT5G48250
Uniprot:Q9LUA9
Length = 373
Score = 135 (52.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 30/97 (30%), Positives = 44/97 (45%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDIC 60
M C+ C + V C +D A LC CD VH+AN L+ +H R + C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV---------CERC 51
Query: 61 QETSGFFFCLQDRALLCRKCDVAIHTA-NSYVSAHQR 96
C +R LC+ CD + H NS ++H +
Sbjct: 52 NAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHK 88
>TAIR|locus:2131709 [details] [associations]
symbol:BBX28 "B-box domain protein 28" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 Pfam:PF00643 SMART:SM00336 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161566 GO:GO:0008270 GO:GO:0003700
GO:GO:0005622 EMBL:AL030978 IPI:IPI00524555 PIR:T05755
RefSeq:NP_194461.1 UniGene:At.28344 EnsemblPlants:AT4G27310.1
GeneID:828839 KEGG:ath:AT4G27310 TAIR:At4g27310 eggNOG:NOG263097
HOGENOM:HOG000115162 InParanoid:O81834 OMA:SAFKSTV PhylomeDB:O81834
ProtClustDB:CLSN2916189 Genevestigator:O81834 Uniprot:O81834
Length = 223
Score = 127 (49.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 4 QCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSS 50
+C++C A++ C +D+A+LCW+CD KVH AN L +KH R L S+
Sbjct: 4 KCDLCNGV-ARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSA 49
>TAIR|locus:2091082 [details] [associations]
symbol:COL9 "CONSTANS-like 9" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017
SMART:SM00336 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0007623 GO:GO:0008270 GO:GO:0003700
EMBL:AC009176 eggNOG:NOG248444 HOGENOM:HOG000116529
ProtClustDB:CLSN2684850 EMBL:AY049290 IPI:IPI00522412
RefSeq:NP_001030659.1 RefSeq:NP_001118599.1 RefSeq:NP_187422.1
RefSeq:NP_974250.1 UniGene:At.18337 STRING:Q9SSE5 PRIDE:Q9SSE5
EnsemblPlants:AT3G07650.1 EnsemblPlants:AT3G07650.2
EnsemblPlants:AT3G07650.3 EnsemblPlants:AT3G07650.4 GeneID:819956
KEGG:ath:AT3G07650 TAIR:At3g07650 InParanoid:Q9SSE5 OMA:TSHIQTE
PhylomeDB:Q9SSE5 Genevestigator:Q9SSE5 GermOnline:AT3G07650
GO:GO:0048579 Uniprot:Q9SSE5
Length = 372
Score = 131 (51.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/89 (32%), Positives = 42/89 (47%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDIC 60
M C+ C + V C +D A LC CD VH+AN L+ +H R + C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV---------CERC 51
Query: 61 QETSGFFFCLQDRALLCRKCDVAIHTANS 89
C+++R LC+ CD + H NS
Sbjct: 52 NAQPATVRCVEERVSLCQNCDWSGHN-NS 79
>TAIR|locus:2147274 [details] [associations]
symbol:BBX29 "B-box domain protein 29" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009409 "response to cold" evidence=IEP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR000315 SMART:SM00336
EMBL:CP002688 GO:GO:0009555 GO:GO:0009409 GO:GO:0008270
GO:GO:0003700 GO:GO:0005622 HOGENOM:HOG000115162
ProtClustDB:CLSN2916189 EMBL:BT012358 EMBL:AK221519 IPI:IPI00528573
RefSeq:NP_200258.2 UniGene:At.43303 STRING:Q6NLH4
EnsemblPlants:AT5G54470.1 GeneID:835535 KEGG:ath:AT5G54470
TAIR:At5g54470 eggNOG:NOG303512 InParanoid:Q6NLH4 OMA:CESCLAR
Genevestigator:Q6NLH4 Uniprot:Q6NLH4
Length = 215
Score = 125 (49.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 4 QCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSS 50
+C +C A++ C +D+A+LCW+CD KVH AN L +KH R L S+
Sbjct: 5 KCELC-CGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSA 50
>TAIR|locus:2095562 [details] [associations]
symbol:BBX31 "B-box domain protein 31" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010224 "response to UV-B" evidence=IEP;RCA] [GO:0009744
"response to sucrose stimulus" evidence=RCA] InterPro:IPR000315
Pfam:PF00643 SMART:SM00336 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 GO:GO:0010224
EMBL:AB028622 EMBL:AY086564 EMBL:AB493627 IPI:IPI00531471
RefSeq:NP_188827.1 UniGene:At.37979 ProteinModelPortal:Q9LRM4
EnsemblPlants:AT3G21890.1 GeneID:821744 KEGG:ath:AT3G21890
TAIR:At3g21890 eggNOG:NOG259331 HOGENOM:HOG000090727
InParanoid:Q9LRM4 OMA:CEADSAF PhylomeDB:Q9LRM4
ProtClustDB:CLSN2685268 Genevestigator:Q9LRM4 Uniprot:Q9LRM4
Length = 121
Score = 106 (42.4 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 3 IQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPK 56
++C +C+ +A V C AD A LC +CD VH AN LA +H R L +S ++ +
Sbjct: 29 VRCELCDG-DASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQKLTR 81
Score = 89 (36.4 bits), Expect = 0.00066, P = 0.00066
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 56 KCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLL 99
+C++C + F C D A LCRKCD +H AN H R +L
Sbjct: 30 RCELCDGDASVF-CEADSAFLCRKCDRWVHGANFLAWRHVRRVL 72
>TAIR|locus:2201277 [details] [associations]
symbol:BBX14 "B-box domain protein 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 HOGENOM:HOG000240360 ProtClustDB:CLSN2689085
EMBL:AC011915 EMBL:AY054625 EMBL:AY081541 EMBL:AY084427
IPI:IPI00518479 PIR:D96709 RefSeq:NP_564932.1 UniGene:At.23999
UniGene:At.69467 UniGene:At.74856 IntAct:Q8LG76 STRING:Q8LG76
PRIDE:Q8LG76 EnsemblPlants:AT1G68520.1 GeneID:843181
KEGG:ath:AT1G68520 TAIR:At1g68520 eggNOG:NOG257442
InParanoid:Q8LG76 OMA:AFLCHAC PhylomeDB:Q8LG76
Genevestigator:Q8LG76 GermOnline:AT1G68520 Uniprot:Q8LG76
Length = 406
Score = 123 (48.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSS 51
C+ C A+ C AD+A LC CD VH+AN LA +H+RV L S+S
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSAS 63
>TAIR|locus:2129860 [details] [associations]
symbol:BBX9 "B-box domain protein 9" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006863 "purine
nucleobase transport" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:Z97338 EMBL:AL161541 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 HOGENOM:HOG000116529 IPI:IPI00529586
PIR:F71416 RefSeq:NP_193260.2 UniGene:At.54335
EnsemblPlants:AT4G15250.1 GeneID:827191 KEGG:ath:AT4G15250
TAIR:At4g15250 eggNOG:NOG321931 InParanoid:O23379 OMA:YQDCGIS
PhylomeDB:O23379 ProtClustDB:CLSN2915042 Genevestigator:O23379
GermOnline:AT4G15250 Uniprot:O23379
Length = 330
Score = 121 (47.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDIC 60
M +C+ C +A + C +D A LC CD VH+AN L+ +H R S KC +
Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTR------SLLCEKCSL- 53
Query: 61 QETSGFFFCLQDRALLCRKC 80
Q T+ C+ + LC+ C
Sbjct: 54 QPTA--VHCMNENVSLCQGC 71
Score = 108 (43.1 bits), Expect = 0.00079, P = 0.00079
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 56 KCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQRFLLTGVKVALEP 108
+CD C +C D A LC CDV +H+AN H R LL K +L+P
Sbjct: 4 RCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCE-KCSLQP 55
>TAIR|locus:2031180 [details] [associations]
symbol:BBX15 "B-box domain protein 15" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016020 "membrane" evidence=IDA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281 GO:GO:0016020
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AY093174
IPI:IPI00533844 PIR:E86384 RefSeq:NP_173915.2 UniGene:At.27494
EnsemblPlants:AT1G25440.1 GeneID:839130 KEGG:ath:AT1G25440
TAIR:At1g25440 eggNOG:NOG293508 HOGENOM:HOG000240360
InParanoid:Q8RWD0 OMA:SDEISHE PhylomeDB:Q8RWD0
ProtClustDB:CLSN2689085 Genevestigator:Q8RWD0 Uniprot:Q8RWD0
Length = 417
Score = 122 (48.0 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPK 56
C+ C A+ C AD+A LC CD VH+AN LA +H+RV L ++S + K
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTASPAVVK 68
>TAIR|locus:2031581 [details] [associations]
symbol:BBX16 "B-box domain protein 16" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0009641 "shade avoidance" evidence=IMP] [GO:0010223 "secondary
shoot formation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC016662 HOGENOM:HOG000240360 EMBL:BT015740
EMBL:BT020183 IPI:IPI00516267 PIR:C96766 RefSeq:NP_177528.1
UniGene:At.34943 IntAct:Q9C9A9 STRING:Q9C9A9
EnsemblPlants:AT1G73870.1 GeneID:843723 KEGG:ath:AT1G73870
TAIR:At1g73870 eggNOG:NOG320376 InParanoid:Q9C9A9 OMA:EAKCENG
PhylomeDB:Q9C9A9 ProtClustDB:CLSN2914358 Genevestigator:Q9C9A9
GermOnline:AT1G73870 Uniprot:Q9C9A9
Length = 392
Score = 119 (46.9 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 5 CNVC-EAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSS 51
C+ C + + A C AD+A LC CD +H+AN LA +H+RV L SSS
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSS 69
>TAIR|locus:1009023318 [details] [associations]
symbol:BBX30 "B-box domain protein 30" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119
SMART:SM00336 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008270
GO:GO:0005622 EMBL:DQ487602 IPI:IPI00657516 RefSeq:NP_001031645.1
UniGene:At.63271 EnsemblPlants:AT4G15248.1 GeneID:3769879
KEGG:ath:AT4G15248 TAIR:At4g15248 OMA:ELCGENA PhylomeDB:Q1G3I2
Genevestigator:Q2V3I2 Uniprot:Q1G3I2
Length = 117
Score = 95 (38.5 bits), Expect = 0.00014, P = 0.00014
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 3 IQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQR 44
+ C +C A V C AD A LC +CD VH+AN LA +H R
Sbjct: 30 VSCELC-GENATVYCEADAAFLCRKCDRWVHSANFLARRHLR 70
Score = 95 (38.5 bits), Expect = 0.00014, P = 0.00014
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 47 LSSSSTQMP-KCDICQETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQR 96
L + S + P C++C E + + C D A LCRKCD +H+AN H R
Sbjct: 21 LCTESHKAPVSCELCGENATVY-CEADAAFLCRKCDRWVHSANFLARRHLR 70
>TAIR|locus:2028421 [details] [associations]
symbol:BBX17 "B-box domain protein 17" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 IPI:IPI00544498
RefSeq:NP_175339.2 UniGene:At.38297 EnsemblPlants:AT1G49130.1
GeneID:841336 KEGG:ath:AT1G49130 OMA:VATKHER Uniprot:F4I1N0
Length = 326
Score = 111 (44.1 bits), Expect = 0.00033, P = 0.00033
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 5 CNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSS 50
C +C A C +D+A LC CD+ VH+AN +A+KH+RV L ++
Sbjct: 28 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTN 73
>ZFIN|ZDB-GENE-030131-5695 [details] [associations]
symbol:trim33l "tripartite motif-containing
33-like" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF00643 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-030131-5695 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 GeneTree:ENSGT00530000062982
EMBL:CR388365 IPI:IPI00618952 Ensembl:ENSDART00000122433
Bgee:E7FDQ1 Uniprot:E7FDQ1
Length = 1293
Score = 116 (45.9 bits), Expect = 0.00055, P = 0.00055
Identities = 27/94 (28%), Positives = 42/94 (44%)
Query: 4 QCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSS--TQMPKCDICQ 61
+C CE E C E ALC +C H K+ H+ +P + Q +C +
Sbjct: 93 KCGGCEENEVSGWCVQCEEALCLDCVTAHHRV-KVTRDHEVMPKKPPTGWIQRRRCPLHS 151
Query: 62 ETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQ 95
+ S FFCL L C+ C + H +S+V+ +
Sbjct: 152 QESLRFFCLVCEELTCKDCQLITHRGHSFVNQEE 185
>TAIR|locus:2088748 [details] [associations]
symbol:BBX10 "B-box domain protein 10" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AP000739 HOGENOM:HOG000116529 EMBL:AB493626 IPI:IPI00533145
RefSeq:NP_188826.1 UniGene:At.53422 EnsemblPlants:AT3G21880.1
GeneID:821743 KEGG:ath:AT3G21880 TAIR:At3g21880 eggNOG:NOG290178
InParanoid:Q9LJ44 OMA:KKTRTFG PhylomeDB:Q9LJ44
ProtClustDB:CLSN2685267 Genevestigator:Q9LJ44 Uniprot:Q9LJ44
Length = 364
Score = 109 (43.4 bits), Expect = 0.00071, P = 0.00071
Identities = 27/95 (28%), Positives = 43/95 (45%)
Query: 1 MRIQCNVCEAAEAKVLCCADEAALCWECDDKVHAANKLASKHQRVPLSSSSTQMPKCDIC 60
M +C+ C ++A + C +D A LC CD VH+AN L+ +H R + C+ C
Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLI---------CEKC 51
Query: 61 QETSGFFFCLQDRALLCRKCDVAIHTANSYVSAHQ 95
CL ++ C+ C H +N H+
Sbjct: 52 FSQPAAIRCLDEKVSYCQGCHW--HESNCSELGHR 84
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.130 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 210 201 0.00089 111 3 11 22 0.45 32
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 614 (65 KB)
Total size of DFA: 194 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.09u 0.16s 18.25t Elapsed: 00:00:01
Total cpu time: 18.09u 0.16s 18.25t Elapsed: 00:00:01
Start: Fri May 10 14:15:21 2013 End: Fri May 10 14:15:22 2013