ndhM protein (Vitis vinifera) - STRING network view

STRING 9.05

ndhM protein (Vitis vinifera) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	ndhM	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence;; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (By similarity) (208 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00023910001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (216 aa)	•		•	0.829
	ndhH	SubName- Full=Chromosome chr10 scaffold_179, whole genome shotgun sequence;; NDH shuttles elect [...] (372 aa)		•	•	0.819
	GSVIVG00005655001	SubName- Full=Putative uncharacterized protein (Chromosome undetermined scaffold_155, whole gen [...] (254 aa)	•	•	•	0.816
	PsbP2	SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (238 aa)	•		•	0.739
	ndhJ	NADH dehydrogenase subunit J ; NDH shuttles electrons from NAD(P)H-plastoquinone, via FMN and i [...] (158 aa)		•	•	0.727
	GSVIVG00018549001	SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (235 aa)	•		•	0.616
	GSVIVG00038032001	SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (158 aa)	•		•	0.616
	GSVIVG00025097001	SubName- Full=Putative uncharacterized protein (Chromosome chr4 scaffold_32, whole genome shotg [...] (221 aa)	•		•	0.574
	psaA	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence;; PsaA and psaB bind P7 [...] (307 aa)	•		•	0.559
	GSVIVG00017440001	SubName- Full=Chromosome chr6 scaffold_15, whole genome shotgun sequence; (113 aa)	•	•		0.557

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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