BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028327
(210 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A7NVJ4|NDHM_VITVI NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis
vinifera GN=ndhM PE=2 SV=1
Length = 208
Score = 328 bits (840), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 162/206 (78%), Positives = 175/206 (84%), Gaps = 4/206 (1%)
Query: 1 MATTSINMASAKFSMLGWIGGKRELKKKRVISISAQQQAEVEESRSKQVKENENQAQVKQ 60
MA TS A KFSMLGWIGGKREL+K+R ISAQQQAEVEES+ +E E Q ++KQ
Sbjct: 1 MAATSSYTACTKFSMLGWIGGKRELRKRRAFFISAQQQAEVEESQQVNAQEEE-QEKMKQ 59
Query: 61 Q--QTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLT 118
Q Q RPVEPQ NV+SKNMSREYGGQWLS TRHVRIYAAYIDP T EFDQTQMDKLT
Sbjct: 60 QGKQKLPRPVEPQVNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLT 119
Query: 119 LILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEI 178
LILDPT EFVWT E+CNKV+AYFQELVDHYEGA LTEYTLRLIGSD+EHYIRKLLYDGEI
Sbjct: 120 LILDPTNEFVWTSETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEI 179
Query: 179 KYNMDARVLNFSMGKPRIMFNNNELP 204
KYNM+ARVLNFSMGKPRI+FN+ LP
Sbjct: 180 KYNMNARVLNFSMGKPRILFNDG-LP 204
>sp|A9PJQ8|NDHM_POPJC NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus
jackii GN=ndhM PE=2 SV=1
Length = 203
Score = 326 bits (835), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 156/201 (77%), Positives = 174/201 (86%), Gaps = 4/201 (1%)
Query: 1 MATTSINMASAKFSMLGWIGGKRELKKKRVISISAQQQAEVEESRSKQVKENENQAQVKQ 60
MA +S MA AKFSMLGW+GG+RELK +RVIS+S Q+QAEV+ES+ +E E +VKQ
Sbjct: 1 MAASSSYMACAKFSMLGWLGGRRELKMRRVISVSPQEQAEVQESQEVNAQEEE---KVKQ 57
Query: 61 QQTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLI 120
P RPVEPQ NV+SKNM REYGGQWLS TRHVRIYAAYIDPET EFDQTQ DKLTLI
Sbjct: 58 PVQP-RPVEPQVNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPETCEFDQTQTDKLTLI 116
Query: 121 LDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKY 180
LDPT EFVWTDE+C KV++YFQELVDHYEGA LTEYTLRLIGSD+EHYIRKLLYDGEIKY
Sbjct: 117 LDPTDEFVWTDETCYKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKY 176
Query: 181 NMDARVLNFSMGKPRIMFNNN 201
NM+ARVLNFSMGKPRI+FNN+
Sbjct: 177 NMNARVLNFSMGKPRILFNND 197
>sp|Q2V2S7|NDHM_ARATH NAD(P)H-quinone oxidoreductase subunit M, chloroplastic
OS=Arabidopsis thaliana GN=ndhM PE=2 SV=1
Length = 217
Score = 265 bits (677), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 121/177 (68%), Positives = 149/177 (84%), Gaps = 1/177 (0%)
Query: 27 KKRVISISAQQQAEVEESRSKQVKENENQAQVKQQQTPLRPVEPQTNVRSKNMSREYGGQ 86
+K + + +Q + +E ++ +KE ++ ++K+Q TPLRPVE Q NV+SK M ++GGQ
Sbjct: 30 QKAFVVTNPEQDSTLEVQETETLKEEQSTEKMKKQPTPLRPVEKQLNVKSKGMG-DFGGQ 88
Query: 87 WLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVD 146
WLS TRHVRIYAAYIDPET EFDQ+QMDKLTLILDPT+EFVW DESCNKV++YFQELVD
Sbjct: 89 WLSSVTRHVRIYAAYIDPETCEFDQSQMDKLTLILDPTEEFVWDDESCNKVYSYFQELVD 148
Query: 147 HYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMFNNNEL 203
HYEGA LTEYTLRLIGSD+EHYIRK+L+DGEI+YNMDARVLNFSMGKPR+ FN + +
Sbjct: 149 HYEGAPLTEYTLRLIGSDVEHYIRKMLFDGEIQYNMDARVLNFSMGKPRVQFNTSNI 205
>sp|Q7FB12|NDHM_ORYSJ NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza
sativa subsp. japonica GN=ndhM PE=2 SV=1
Length = 220
Score = 243 bits (621), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 111/155 (71%), Positives = 132/155 (85%)
Query: 50 KENENQAQVKQQQTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEF 109
+E + + + ++Q P +P+ Q SKNMSREYGGQWLSC TRH+RIYAAYI+PET F
Sbjct: 63 EEEQRRERKTRRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYAAYINPETNAF 122
Query: 110 DQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYI 169
DQTQMDKLTL+LDPT EFVWTDE+C KV+ FQ+LVDHYEGA L+EYTLRLIGSDLEH+I
Sbjct: 123 DQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLRLIGSDLEHFI 182
Query: 170 RKLLYDGEIKYNMDARVLNFSMGKPRIMFNNNELP 204
RKLLYDGEIKYNM +RVLNFSMGKPRI FN++++P
Sbjct: 183 RKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIP 217
>sp|A2XVZ1|NDHM_ORYSI NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza
sativa subsp. indica GN=ndhM PE=2 SV=1
Length = 220
Score = 243 bits (621), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 111/155 (71%), Positives = 132/155 (85%)
Query: 50 KENENQAQVKQQQTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEF 109
+E + + + ++Q P +P+ Q SKNMSREYGGQWLSC TRH+RIYAAYI+PET F
Sbjct: 63 EEEQRRERKTRRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYAAYINPETNAF 122
Query: 110 DQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYI 169
DQTQMDKLTL+LDPT EFVWTDE+C KV+ FQ+LVDHYEGA L+EYTLRLIGSDLEH+I
Sbjct: 123 DQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLRLIGSDLEHFI 182
Query: 170 RKLLYDGEIKYNMDARVLNFSMGKPRIMFNNNELP 204
RKLLYDGEIKYNM +RVLNFSMGKPRI FN++++P
Sbjct: 183 RKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIP 217
>sp|A9THA7|NDHM_PHYPA NAD(P)H-quinone oxidoreductase subunit M, chloroplastic
OS=Physcomitrella patens subsp. patens GN=ndhM PE=2 SV=1
Length = 204
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 104/132 (78%)
Query: 65 LRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPT 124
+R E + ++K +SRE GGQWLSC TRHVRIYA Y+DPET DQ+Q+DKLTL+LDP
Sbjct: 61 VRAEEVKEVTQAKGLSRESGGQWLSCTTRHVRIYAGYVDPETQVMDQSQLDKLTLMLDPD 120
Query: 125 KEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDA 184
EF W +E KV+ ++ELV+ Y GA LTEYTLRLIGSDLEHYIRKLL GE+KYN+D
Sbjct: 121 NEFEWPEEMVEKVYDKYRELVETYAGADLTEYTLRLIGSDLEHYIRKLLLAGELKYNLDC 180
Query: 185 RVLNFSMGKPRI 196
RVLNFSMGKPRI
Sbjct: 181 RVLNFSMGKPRI 192
>sp|Q7NKF6|NDHM_GLOVI NAD(P)H-quinone oxidoreductase subunit M OS=Gloeobacter violaceus
(strain PCC 7421) GN=ndhM PE=3 SV=1
Length = 119
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 73/109 (66%), Gaps = 3/109 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRHV I+AA I + + T KLTL +DP EF+W D + KV++ F LV
Sbjct: 2 LKSTTRHVHIFAADIRNDNFIASDT---KLTLDVDPDNEFIWNDPALQKVYSEFDRLVAA 58
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 196
Y G LTEY LR IGSDLE++IR LL GEI YN+D+RVLNFSMG+P++
Sbjct: 59 YTGLALTEYNLRRIGSDLENFIRGLLQQGEIAYNLDSRVLNFSMGRPQV 107
>sp|B7KFF4|NDHM_CYAP7 NAD(P)H-quinone oxidoreductase subunit M OS=Cyanothece sp. (strain
PCC 7424) GN=ndhM PE=3 SV=1
Length = 119
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 73/110 (66%), Gaps = 5/110 (4%)
Query: 88 LSCATRHVRIYAAYI-DPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVD 146
L TRH+RIY A I + E E D LTL +DP EF+W ++S KV+ F +LV+
Sbjct: 3 LKSTTRHIRIYTAEIQNNELVESDNV----LTLDVDPDNEFLWDEDSLQKVYRKFDDLVE 58
Query: 147 HYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 196
Y G LTEY LR IGSDLE +IR LL GEI YN+D+RVLN+SMG PR+
Sbjct: 59 SYSGEDLTEYNLRRIGSDLELFIRSLLQQGEISYNLDSRVLNYSMGLPRV 108
>sp|Q46HM9|NDHM_PROMT NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus
(strain NATL2A) GN=ndhM PE=3 SV=1
Length = 115
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 72/108 (66%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L C TRHVRI+ A ++ FD LTL +DP EF W+D+S KV YF+ELVD
Sbjct: 6 LKCTTRHVRIFTAVVENNDLIFDNGH---LTLDIDPDNEFSWSDQSIKKVQDYFRELVDF 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
L++Y+LR IGS LE +IRKLL DGE+ YN ++RV+N+SMG PR
Sbjct: 63 QADNELSDYSLRKIGSLLEDFIRKLLKDGELSYNPNSRVMNYSMGLPR 110
>sp|Q2JNM8|NDHM_SYNJB NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ndhM PE=3 SV=1
Length = 121
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L C TRHV I+A + + + D TL +DP E VWTD + KV+A F+ELV+
Sbjct: 2 LKCTTRHVHIFAGEVTADNNFVPRD--DLFTLDVDPDNELVWTDAALQKVYARFEELVEE 59
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 196
Y G LTEY +R IGSDLEH+IR LL GEI YN+ R NFSMG P+I
Sbjct: 60 YRGRDLTEYNIRRIGSDLEHFIRSLLKQGEIAYNLQGRAPNFSMGFPQI 108
>sp|Q2JT01|NDHM_SYNJA NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus sp.
(strain JA-3-3Ab) GN=ndhM PE=3 SV=1
Length = 121
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L C TRHV I+A + + + D LTL +DP E VW D + KV+A F+ELV+
Sbjct: 2 LKCTTRHVHIFAGEVTADNHFVPRD--DLLTLDVDPDNELVWNDAALQKVYARFEELVEE 59
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 196
Y G LTEY LR IGSDLEH+IR LL GEI YN+ R N+SMG P+I
Sbjct: 60 YRGRDLTEYNLRRIGSDLEHFIRSLLKQGEIAYNLQGRTPNYSMGFPQI 108
>sp|Q8YW84|NDHM_NOSS1 NAD(P)H-quinone oxidoreductase subunit M OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=ndhM PE=3 SV=1
Length = 118
Score = 110 bits (274), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRH+RI+AA ID + Q+ LTL +DP EF W +++ K++ F ELV+
Sbjct: 7 LKSTTRHIRIFAAEIDRDGELVPSNQV--LTLDIDPDNEFNWNEDALQKIYRKFDELVEA 64
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 196
GA LT+Y LR IGSDLEHY+R LL GEI YN+ ARV N+S+G P++
Sbjct: 65 SSGADLTDYNLRRIGSDLEHYLRSLLQKGEISYNLSARVTNYSLGLPQV 113
>sp|Q3MGF7|NDHM_ANAVT NAD(P)H-quinone oxidoreductase subunit M OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=ndhM PE=3 SV=1
Length = 118
Score = 110 bits (274), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRH+RI+AA ID + Q+ LTL +DP EF W +++ K++ F ELV+
Sbjct: 7 LKSTTRHIRIFAAEIDRDGELVPSNQV--LTLDIDPDNEFNWNEDALQKIYRKFDELVEA 64
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 196
GA LT+Y LR IGSDLEHY+R LL GEI YN+ ARV N+S+G P++
Sbjct: 65 SSGADLTDYNLRRIGSDLEHYLRSLLQKGEISYNLSARVTNYSLGLPQV 113
>sp|Q7U417|NDHM_SYNPX NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus sp.
(strain WH8102) GN=ndhM PE=3 SV=1
Length = 115
Score = 110 bits (274), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L C TRHVR++ A +D + D+LTL LDP EF+W+D +KV FQ+LV+
Sbjct: 6 LKCTTRHVRLFTARVDNQDL---VPSADELTLDLDPDNEFLWSDAVVSKVQQRFQQLVEA 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
G L++Y+LR IG+DLE YIR+LL GE+ YN D RV NFSMG PR
Sbjct: 63 GAGGELSDYSLRRIGTDLEGYIRQLLQAGELSYNPDGRVQNFSMGLPR 110
>sp|B2IZS8|NDHM_NOSP7 NAD(P)H-quinone oxidoreductase subunit M OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=ndhM PE=3 SV=1
Length = 121
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRHVRI+A ID + Q+ LTL +DP EF W +++ KV+ F ELV+
Sbjct: 7 LKSTTRHVRIFAGEIDRDGDLVPSQQV--LTLDIDPDNEFNWNEDALQKVYRKFDELVEA 64
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMFNNNEL 203
GA LT+Y LR +GSDLEHY+R LL GEI YN+ ARV N+SMG P++ ++ ++
Sbjct: 65 SSGADLTDYNLRRVGSDLEHYLRSLLQLGEISYNLSARVTNYSMGVPQVAIDDKQV 120
>sp|B0JPD8|NDHM_MICAN NAD(P)H-quinone oxidoreductase subunit M OS=Microcystis aeruginosa
(strain NIES-843) GN=ndhM PE=3 SV=1
Length = 109
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 72/113 (63%), Gaps = 11/113 (9%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQM----DKLTLILDPTKEFVWTDESCNKVFAYFQE 143
L TRH+RIY A E Q+ + LTL +DP EF W + + NKV++ F E
Sbjct: 3 LKSTTRHIRIYTA-------EVKNNQLIESNNVLTLDVDPDNEFNWEEVALNKVYSKFDE 55
Query: 144 LVDHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 196
LV+ Y G L+EY LR IGSDLEH+IR LL GEI YN++ARV N+SMG P++
Sbjct: 56 LVESYNGEELSEYNLRRIGSDLEHFIRSLLQKGEISYNLNARVQNYSMGLPKL 108
>sp|B1XPU8|NDHM_SYNP2 NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=ndhM PE=3 SV=1
Length = 119
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRHVRIY A I +T LTL +DP EFVW +ES KV+ F LV+
Sbjct: 3 LKSTTRHVRIYTAEIQKNELIPSET---VLTLDVDPDNEFVWPEESLQKVYRQFDALVES 59
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 196
G LTEY LR IGSDLE +IR LL GE++YN+D+RV+NFSMG P++
Sbjct: 60 NSGEDLTEYNLRRIGSDLEAFIRDLLQKGELRYNLDSRVMNFSMGLPQM 108
>sp|A2BZX1|NDHM_PROM1 NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus
(strain NATL1A) GN=ndhM PE=3 SV=1
Length = 115
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L C TRHVRI+ A ++ D LTL +DP EF W+D+S KV YF+ELV+
Sbjct: 6 LKCTTRHVRIFTAVVENNDLILDNGH---LTLDIDPDNEFSWSDQSIKKVQDYFRELVEL 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
L++YTLR IGS LE +IRKLL DGE+ YN ++RV+N+SMG PR
Sbjct: 63 QADNELSDYTLRKIGSLLEDFIRKLLKDGELSYNPNSRVMNYSMGLPR 110
>sp|Q3AH04|NDHM_SYNSC NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus sp.
(strain CC9605) GN=ndhM PE=3 SV=2
Length = 115
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L C TRHVR++ A + E D+LTL LDP EF+W S KV F+ELVD
Sbjct: 6 LKCTTRHVRLFTAALQEEDL---VPSDDQLTLDLDPDNEFLWDAASLAKVQGRFKELVDA 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
G L++YTLR IG+DLE +IR+LL GE+ YN D RV NFSMG PR
Sbjct: 63 AAGGELSDYTLRRIGTDLEGFIRQLLQAGELSYNPDGRVQNFSMGLPR 110
>sp|A5GQI1|NDHM_SYNR3 NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus sp.
(strain RCC307) GN=ndhM PE=3 SV=1
Length = 116
Score = 107 bits (266), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L C TRHVRI+ A ++ + E + DKLTL LDP EF W KV F ELVD
Sbjct: 6 LKCTTRHVRIFTATVE-DNGEL-KASSDKLTLDLDPDNEFEWDQPVLAKVQQRFAELVDA 63
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
G L++Y LR IG+DLE +IR+LL GE++YN+ ARVLN+SMG PR
Sbjct: 64 AAGTELSDYNLRRIGTDLEGFIRQLLQAGELRYNLGARVLNYSMGLPR 111
>sp|B7JZ00|NDHM_CYAP8 NAD(P)H-quinone oxidoreductase subunit M OS=Cyanothece sp. (strain
PCC 8801) GN=ndhM PE=3 SV=1
Length = 118
Score = 107 bits (266), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 71/110 (64%), Gaps = 5/110 (4%)
Query: 88 LSCATRHVRIYAAYI-DPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVD 146
L TRH+R+Y A I + E D LTL +DP EF W ++S KV+ F ELV+
Sbjct: 3 LKSTTRHIRLYTAEIKNSELVPSDNV----LTLDVDPDNEFNWGEDSLQKVYRKFDELVE 58
Query: 147 HYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 196
Y G LT+Y LR IGSDLEH+IR LL G+I YN+ +RVLN+SMG P++
Sbjct: 59 SYSGQDLTDYNLRRIGSDLEHFIRSLLQKGDISYNLQSRVLNYSMGLPKV 108
>sp|B1WTG3|NDHM_CYAA5 NAD(P)H-quinone oxidoreductase subunit M OS=Cyanothece sp. (strain
ATCC 51142) GN=ndhM PE=3 SV=2
Length = 119
Score = 107 bits (266), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 74/111 (66%), Gaps = 5/111 (4%)
Query: 87 WLSCATRHVRIYAAYI-DPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELV 145
++ TRH+RIYAA + + E E D LTL +DP EF W +++ KV+ F ELV
Sbjct: 2 FVKSTTRHIRIYAAEVHNSELVESDNM----LTLDVDPDNEFNWDEDALQKVYRKFDELV 57
Query: 146 DHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 196
+ G L++Y LR IGSDLEH++R LL +GEI YN+ +RVLN+SMG P++
Sbjct: 58 EAASGEELSDYNLRRIGSDLEHFVRNLLQNGEISYNLKSRVLNYSMGLPKV 108
>sp|Q3B058|NDHM_SYNS9 NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus sp.
(strain CC9902) GN=ndhM PE=3 SV=1
Length = 115
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 72/108 (66%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L C TRHVR++ A +D + ++LTL LDP EF+W++ ++V F++LVD
Sbjct: 6 LKCTTRHVRLFTARVDNDDL---VPSANELTLDLDPDNEFIWSESCISQVQQRFKQLVDA 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
G L++YTLR IG+DLE +IR+LL GE+ YN +ARV NFSMG PR
Sbjct: 63 AAGGELSDYTLRRIGTDLEGFIRQLLQRGELSYNPEARVQNFSMGLPR 110
>sp|A9BD03|NDHM_PROM4 NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus
(strain MIT 9211) GN=ndhM PE=3 SV=1
Length = 115
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L C TRH+RI+ A + D + LTL LDP EF+W + KV F ELVD
Sbjct: 6 LKCTTRHIRIFTARCENNDLVQDS---EHLTLDLDPDNEFIWEELVIGKVHKRFSELVDS 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
Y G L++Y LR IGSDLE IR+LL GE+KYN D RVLN+SMG PR
Sbjct: 63 YSGKDLSDYNLRKIGSDLEGTIRQLLQAGELKYNPDCRVLNYSMGLPR 110
>sp|Q7VE46|NDHM_PROMA NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus
(strain SARG / CCMP1375 / SS120) GN=ndhM PE=3 SV=1
Length = 115
Score = 104 bits (260), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L C TRH+RI+ A D D LT+ LDP EF+W +++ KV F ELV+
Sbjct: 6 LKCTTRHIRIFTAITQNNNLIEDS---DHLTMDLDPDNEFLWENQAIEKVQNRFSELVES 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
G L++Y LR IGSDLE YIR++L GE+ YN D+RVLN+SMG PR
Sbjct: 63 QVGQELSDYVLRKIGSDLESYIRQMLQAGEVSYNPDSRVLNYSMGLPR 110
>sp|P74338|NDHM_SYNY3 NAD(P)H-quinone oxidoreductase subunit M OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ndhM PE=1 SV=1
Length = 121
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
+ TRHVRI++A + + LT+ +DP EFVW +++ +V+ F ELV+
Sbjct: 3 VKSTTRHVRIFSAEVQGNEL---IPSNNVLTMDVDPDNEFVWNEDALQQVYRRFDELVES 59
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 196
Y G LT+Y LR IGSDLEH+IR LL G++ YN+D RVLN+SMG P++
Sbjct: 60 YSGEDLTDYNLRRIGSDLEHFIRDLLQAGKVSYNLDCRVLNYSMGLPKV 108
>sp|Q110L9|NDHM_TRIEI NAD(P)H-quinone oxidoreductase subunit M OS=Trichodesmium
erythraeum (strain IMS101) GN=ndhM PE=3 SV=1
Length = 115
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 70/110 (63%), Gaps = 5/110 (4%)
Query: 88 LSCATRHVRIYAAYI-DPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVD 146
L TRH+RI+A + + E DQ LTL +DP E W D + +V+ F ELV+
Sbjct: 3 LKSTTRHIRIFAGTVENNELVPDDQA----LTLDIDPDNELNWNDTAVEQVYRKFDELVE 58
Query: 147 HYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 196
Y G+ LTEY LR +GSDLEH++R LL GEI YN+ +RV N+S+G PR+
Sbjct: 59 SYSGSDLTEYNLRCMGSDLEHFVRSLLQSGEISYNLGSRVNNYSLGLPRV 108
>sp|B0C8S5|NDHM_ACAM1 NAD(P)H-quinone oxidoreductase subunit M OS=Acaryochloris marina
(strain MBIC 11017) GN=ndhM PE=3 SV=1
Length = 114
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 72/110 (65%), Gaps = 3/110 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRH+ IY A + E E ++ LTL +DP E VW++++ +V+A F ELV+
Sbjct: 3 LKSTTRHIHIYTAEV--ENNELIPSE-SVLTLDVDPDNELVWSEDALQRVYAKFDELVET 59
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIM 197
Y G LT+Y LR IGSDLEHY+R LL G + YN+ +RV NFSMG P+++
Sbjct: 60 YSGEDLTDYNLRRIGSDLEHYVRSLLQKGIVGYNLSSRVRNFSMGLPQVI 109
>sp|Q8DLN5|NDHM_THEEB NAD(P)H-quinone oxidoreductase subunit M OS=Thermosynechococcus
elongatus (strain BP-1) GN=ndhM PE=1 SV=1
Length = 111
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 69/110 (62%), Gaps = 5/110 (4%)
Query: 88 LSCATRHVRIYAAYI-DPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVD 146
L TRHV IYA ++ D E + LTL +DP E W + + KV A F+ELV
Sbjct: 3 LKSTTRHVHIYAGHVVDGEV----HPDTETLTLNVDPDNELEWNEAALAKVEAKFRELVA 58
Query: 147 HYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 196
+ G LTEY LR IGSDLEH+IR LL GEI YN+++RV N+S+G PR+
Sbjct: 59 NAAGEDLTEYNLRRIGSDLEHFIRSLLMQGEIGYNLNSRVRNYSLGIPRV 108
>sp|A2CD36|NDHM_PROM3 NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus
(strain MIT 9303) GN=ndhM PE=3 SV=1
Length = 115
Score = 100 bits (249), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L C TRHVRI+ A ++ D D+LTL LDP EF+WT+ ++ F ELV
Sbjct: 6 LKCTTRHVRIFTARVENNDLVPDP---DQLTLDLDPDNEFLWTESVIKEIQQRFAELVAS 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
+ G L++Y LR IGS+LE IRKLL G++ YN + RVLN+SMG PR
Sbjct: 63 HAGGELSDYNLRKIGSELEGTIRKLLQAGKLSYNPECRVLNYSMGLPR 110
>sp|Q7V4E7|NDHM_PROMM NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus
(strain MIT 9313) GN=ndhM PE=3 SV=1
Length = 115
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L C TRHVRI+ A ++ D Q LTL LDP EF+WT+ ++ F ELV
Sbjct: 6 LKCTTRHVRIFTARVENNDLVPDPNQ---LTLDLDPDNEFLWTESVTKEIQQRFAELVAS 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
+ G L++Y LR IGS+LE IRKLL G++ YN + RVLN+SMG PR
Sbjct: 63 HAGGELSDYNLRRIGSELEGTIRKLLQAGKLSYNPECRVLNYSMGLPR 110
>sp|Q5N066|NDHM_SYNP6 NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndhM
PE=3 SV=1
Length = 110
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRH+RI+ A I+ + T LTL +DP EF W +E+ KV+ F +LV+
Sbjct: 3 LKSTTRHIRIFTAEIEGNELQPSDT---VLTLDVDPDNEFNWNEEALQKVYRQFDDLVES 59
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
Y G L+EY LR IGS+LE +R++L GEI YN++ RVLN+SMG P+
Sbjct: 60 YAGQELSEYNLRRIGSELEVLLRQMLQAGEISYNLNCRVLNYSMGVPQ 107
>sp|Q31LQ7|NDHM_SYNE7 NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus elongatus
(strain PCC 7942) GN=ndhM PE=3 SV=1
Length = 110
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRH+RI+ A I+ + T LTL +DP EF W +E+ KV+ F +LV+
Sbjct: 3 LKSTTRHIRIFTAEIEGNELQPSDT---VLTLDVDPDNEFNWNEEALQKVYRQFDDLVES 59
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
Y G L+EY LR IGS+LE +R++L GEI YN++ RVLN+SMG P+
Sbjct: 60 YAGQELSEYNLRRIGSELEVLLRQMLQAGEISYNLNCRVLNYSMGVPQ 107
>sp|A2BNT9|NDHM_PROMS NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus
(strain AS9601) GN=ndhM PE=3 SV=1
Length = 115
Score = 97.4 bits (241), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRHVRI+ A + E +F +KLTL LDP EF+W ++S NK+ F EL+
Sbjct: 6 LKSTTRHVRIFTAEVVDEELKF---HPNKLTLDLDPDNEFIWNEDSLNKINEKFNELIKE 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
G L +Y LR IGS++E I+ LL +G++ YN D RV+N+SMG P+
Sbjct: 63 RAGKDLDDYELRKIGSEIEGLIKFLLQNGQLSYNPDCRVMNYSMGLPK 110
>sp|B1X487|NDHM_PAUCH NAD(P)H-quinone oxidoreductase subunit M, organellar chromatophore
OS=Paulinella chromatophora GN=ndhM PE=3 SV=1
Length = 115
Score = 97.4 bits (241), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRH+RI+ A ++ D +Q LTL +DP EF+W + K+ + F+ELV+
Sbjct: 6 LKSTTRHIRIFTARVENNDLIADTSQ---LTLDIDPDNEFLWEQSTIEKIQSRFKELVEC 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
+ GA LT+YTLR IG++LE + LL GE+ YN +ARVLN+SMG PR
Sbjct: 63 HTGADLTDYTLRRIGTELEGTLFSLLQAGELSYNPNARVLNYSMGLPR 110
>sp|Q0I6X5|NDHM_SYNS3 NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus sp.
(strain CC9311) GN=ndhM PE=3 SV=1
Length = 115
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRHVR++ A ++ D Q LTL LDP EF+W D V F+ELV+
Sbjct: 6 LKSTTRHVRLFTARVNEGRLVPDPNQ---LTLDLDPDNEFLWNDSCIQTVQQRFRELVEA 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
+ G L +Y LR IGS+LE IR+LL G++ YN D RVLN+SMG PR
Sbjct: 63 HAGQPLNDYNLRRIGSELEGSIRQLLQAGQLSYNPDCRVLNYSMGLPR 110
>sp|A8G2F0|NDHM_PROM2 NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus
(strain MIT 9215) GN=ndhM PE=3 SV=1
Length = 115
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRHVRI+ A + + +F +KLTL LDP EF+W ++S K+ F+EL++
Sbjct: 6 LKSTTRHVRIFTAEVVDKELQF---HPNKLTLDLDPDNEFIWNEDSLKKINQKFKELINE 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
G L +Y LR IGS++E I+ LL +GE+ YN D RV+N+SMG P+
Sbjct: 63 RAGRDLDDYELRKIGSEVEGLIKFLLQNGELSYNPDCRVMNYSMGLPK 110
>sp|Q31D36|NDHM_PROM9 NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus
(strain MIT 9312) GN=ndhM PE=3 SV=1
Length = 115
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRHVRI+ A + +F +KLTL LDP EF+W ++S N++ F EL+
Sbjct: 6 LKSTTRHVRIFTAEVVDNELQF---HPNKLTLDLDPDNEFIWNEDSLNEINKKFNELIKE 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
G L +Y LR IGS++E I+ LL +G++ YN D RV+N+SMG P+
Sbjct: 63 RAGKDLDDYELRKIGSEIEGLIKILLQNGQLSYNPDCRVMNYSMGLPK 110
>sp|A3PAL2|NDHM_PROM0 NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus
(strain MIT 9301) GN=ndhM PE=3 SV=1
Length = 115
Score = 93.6 bits (231), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRHVRI+ A + E +F +KLTL LDP EF+W ++S NK+ F L+
Sbjct: 6 LKSTTRHVRIFTAEVVDEELKF---HPNKLTLDLDPDNEFIWNEDSLNKINEKFNGLIKE 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKP 194
G L +Y LR IGS++E I+ LL +G++ YN D RV+N+SMG P
Sbjct: 63 RAGKDLDDYELRKIGSEIEGLIKFLLQNGQLSYNPDCRVMNYSMGLP 109
>sp|A5GP35|NDHM_SYNPW NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus sp.
(strain WH7803) GN=ndhM PE=3 SV=1
Length = 115
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRH+R++ A ++ D Q LTL LDP EF+WT+ + + F++LV+
Sbjct: 6 LKSTTRHIRLFTARVENGDLVPDPEQ---LTLDLDPDNEFLWTEGTVTTIQTRFRDLVES 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
Y G L +Y LR IG++LE IR+LL G + YN D RV+N+SMG PR
Sbjct: 63 YAGQPLNDYNLRRIGTELEGSIRELLQAGSLTYNPDCRVMNYSMGLPR 110
>sp|Q7V3D1|NDHM_PROMP NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus
subsp. pastoris (strain CCMP1986 / MED4) GN=ndhM PE=3
SV=1
Length = 115
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRHVRI+ A + F +KLTL LDP EF+W ++S KV F ELV
Sbjct: 6 LKSTTRHVRIFTADVINNDLVF---HPNKLTLDLDPDNEFIWNEDSLKKVNQRFTELVQE 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
G L +Y LR IGS++E I+ LL +G + YN + RV+N+SMG P+
Sbjct: 63 RAGKSLDDYELRKIGSEIEGLIKYLLQNGLLSYNPECRVMNYSMGLPK 110
>sp|A2BUC1|NDHM_PROM5 NAD(P)H-quinone oxidoreductase subunit M OS=Prochlorococcus marinus
(strain MIT 9515) GN=ndhM PE=3 SV=1
Length = 115
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 88 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDH 147
L TRHVRI+ A + ++ +KLTL LDP EF+W +ES KV F ELV+
Sbjct: 6 LKSTTRHVRIFTAEVVNNDLKY---HPNKLTLDLDPDNEFIWNEESLKKVNQKFTELVEE 62
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPR 195
G L +Y LR IGS++E I+ LL + + YN + RV+N+SMG P+
Sbjct: 63 RAGKSLDDYELRKIGSEVEGLIKYLLQNSLLSYNPECRVMNYSMGLPK 110
>sp|A1VD23|F16PA_DESVV Fructose-1,6-bisphosphatase class 1 OS=Desulfovibrio vulgaris
subsp. vulgaris (strain DP4) GN=fbp PE=3 SV=1
Length = 337
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 17/116 (14%)
Query: 97 IYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWT---------DESCNKVFAYFQELVDH 147
++ +DP EF + D P + +++ DE ++ +YF+ DH
Sbjct: 178 VHGFTLDPSVGEFLLSHPDMSI----PERGRIYSINESYWNYWDEPTREIVSYFKG--DH 231
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMFNNNEL 203
E Y+LR +GS + + R LLY G Y MD R + GK R+M + L
Sbjct: 232 NERG--KPYSLRYVGSLVADFHRTLLYGGIFMYPMDYRHPDKPQGKLRLMCEASPL 285
>sp|Q72AZ9|F16PA_DESVH Fructose-1,6-bisphosphatase class 1 OS=Desulfovibrio vulgaris
(strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=fbp
PE=3 SV=1
Length = 337
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 17/116 (14%)
Query: 97 IYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWT---------DESCNKVFAYFQELVDH 147
++ +DP EF + D P + +++ DE ++ +YF+ DH
Sbjct: 178 VHGFTLDPSVGEFLLSHPDMSI----PERGRIYSINESYWNYWDEPTREIVSYFKG--DH 231
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMFNNNEL 203
E Y+LR +GS + + R LLY G Y MD R + GK R+M + L
Sbjct: 232 NERG--KPYSLRYVGSLVADFHRTLLYGGIFMYPMDYRHPDKPQGKLRLMCEASPL 285
>sp|Q30ZN0|F16PA_DESDG Fructose-1,6-bisphosphatase class 1 OS=Desulfovibrio desulfuricans
(strain G20) GN=fbp PE=3 SV=1
Length = 338
Score = 38.5 bits (88), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 17/116 (14%)
Query: 97 IYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWT---------DESCNKVFAYFQELVDH 147
++ +DP EF + D I P + +++ DE +V +YF+
Sbjct: 180 VHGFTLDPSVGEFLLSHPD----IRYPEQGRIYSVNESYWHYWDEPTREVVSYFKGP--- 232
Query: 148 YEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMFNNNEL 203
+ L Y+LR +GS + + R L Y G Y MD R+ GK R+M + L
Sbjct: 233 -DNPLGKPYSLRYVGSLVADFHRNLFYGGIFMYPMDYRLPEKPQGKLRLMCEASPL 287
>sp|P22418|F16P1_SPIOL Fructose-1,6-bisphosphatase, chloroplastic OS=Spinacia oleracea
PE=1 SV=2
Length = 415
Score = 35.0 bits (79), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 16/154 (10%)
Query: 51 ENENQAQVKQQQTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEF- 109
++E+Q ++Q+ + +P N+ + Y + T +YA +DP EF
Sbjct: 219 DDESQLSAEEQRCVVNVCQPGDNLLAAGYCM-YSSSVIFVLTIGKGVYAFTLDPMYGEFV 277
Query: 110 ---DQTQMDKLTLI--LDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSD 164
++ Q+ K I + +W D K+ Y +L + G Y+ R IGS
Sbjct: 278 LTSEKIQIPKAGKIYSFNEGNYKMWDD----KLKKYMDDLKE--PGESQKPYSSRYIGSL 331
Query: 165 LEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMF 198
+ + R LLY G Y DA+ N GK R+++
Sbjct: 332 VGDFHRTLLYGGIYGYPRDAKSKN---GKLRLLY 362
>sp|A6VQU2|RAPA_ACTSZ RNA polymerase-associated protein RapA OS=Actinobacillus
succinogenes (strain ATCC 55618 / 130Z) GN=rapA PE=3
SV=1
Length = 966
Score = 34.7 bits (78), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 111 QTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYIR 170
QTQ D LI+D W+ E+ N + + L LL T +G + H+ R
Sbjct: 274 QTQFD--LLIVDEAHHLTWSPEAANPEYQLVESLTKQIPSVLLLTATPEQLGQE-SHFAR 330
Query: 171 KLLYDGEIKYNMDARV 186
L D + Y+ DA V
Sbjct: 331 LKLLDADRFYDYDAFV 346
>sp|C6BTU7|F16PA_DESAD Fructose-1,6-bisphosphatase class 1 OS=Desulfovibrio salexigens
(strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763)
GN=fbp PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 9/120 (7%)
Query: 83 YGGQWLSCATRHVRIYAAYIDPETWEFDQTQMD-KL--TLILDPTKEFVWT--DESCNKV 137
YG + T ++ +DP EF + + K+ T + E W E+ KV
Sbjct: 165 YGSSTMLVFTTGDGVHGFTMDPGVGEFLLSHPNMKIPDTGNIYSVNEGYWPYWSEATKKV 224
Query: 138 FAYFQELVDHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIM 197
+F+ D+ G Y+LR IGS + + R L+Y G Y D R GK R++
Sbjct: 225 VGHFKSR-DNIHGK---PYSLRYIGSLVADFHRNLIYGGVFMYPADDRDPKKPRGKLRLL 280
>sp|B3QWF5|F16PA_CHLT3 Fructose-1,6-bisphosphatase class 1 OS=Chloroherpeton thalassium
(strain ATCC 35110 / GB-78) GN=fbp PE=3 SV=1
Length = 349
Score = 30.4 bits (67), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 20/130 (15%)
Query: 83 YGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWT---------DES 133
YG + T ++ +DP EF + + I P + +++ D+
Sbjct: 164 YGSSVMLVYTTGQGVHGFTLDPSIGEFLLSHEN----IKTPKRGKIYSMNEGYYRYFDDG 219
Query: 134 CNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGK 193
K Y Q+ + A Y+ R IGS + + R LLY G Y R GK
Sbjct: 220 IKKYIKYLQQ----EDKASKRPYSARYIGSCVADFHRNLLYGGIFIY---PRTAKSPKGK 272
Query: 194 PRIMFNNNEL 203
R+M+ N L
Sbjct: 273 LRLMYEANPL 282
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,630,851
Number of Sequences: 539616
Number of extensions: 3093313
Number of successful extensions: 16930
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 16076
Number of HSP's gapped (non-prelim): 667
length of query: 210
length of database: 191,569,459
effective HSP length: 112
effective length of query: 98
effective length of database: 131,132,467
effective search space: 12850981766
effective search space used: 12850981766
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)