BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028328
(210 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P32438|YPOL_THETH IMPACT family member in pol 5'region (Fragment) OS=Thermus
thermophilus PE=3 SV=1
Length = 179
Score = 117 bits (293), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 97/138 (70%), Gaps = 1/138 (0%)
Query: 28 IKKSKFIAIAGPISNEQSAQSFLSQVSDPRATHNCWAYKVGNQYRSNDDGEPSGTAGKPI 87
I++S+F+A A P ++E+ A +FL+ +P+ATHN +AY++G YR +DDGEP G+PI
Sbjct: 2 IQRSRFLAKAAPAASEEEALAFLAAHREPQATHNAYAYRIGPLYRFSDDGEPR-APGRPI 60
Query: 88 HSAIVSSGLDRIMVVVTRYFGGIKLGTGGLVRAYGGVASECLRNAPTILVKSRVPMGVEV 147
AI ++GLDR++V+V RYFGG+KLG GGLVRAYGGVA+E LR AP + V + V
Sbjct: 61 LHAIEAAGLDRVVVLVVRYFGGVKLGAGGLVRAYGGVAAEALRRAPKAPLLDWVEVAFRV 120
Query: 148 PFELLGILYHQLQLFQVE 165
PF +G ++ L+ +E
Sbjct: 121 PFPEVGRVHGLLRARHLE 138
>sp|P32437|YVYE_BACSU IMPACT family member YvyE OS=Bacillus subtilis (strain 168) GN=yvyE
PE=3 SV=2
Length = 217
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 86/155 (55%), Gaps = 5/155 (3%)
Query: 14 AFTTIKETVTFEKEIKKSKFIAIAGPISNEQSAQSFLSQVSDPR--ATHNCWAYKVGNQ- 70
++ T+KE E I+KS+FI +S EQ AQ F+ ++ ATHNC AY +G
Sbjct: 4 SYFTVKEAGEHEIVIEKSRFICHLSRVSTEQEAQEFIQKIKKQHWNATHNCSAYVIGEND 63
Query: 71 --YRSNDDGEPSGTAGKPIHSAIVSSGLDRIMVVVTRYFGGIKLGTGGLVRAYGGVASEC 128
++NDDGEPSGTAG P+ + L VVTRYFGGIKLG GGL+RAYG SE
Sbjct: 64 HIQKANDDGEPSGTAGVPMLEVLKKRRLKDTCAVVTRYFGGIKLGAGGLIRAYGKSVSEG 123
Query: 129 LRNAPTILVKSRVPMGVEVPFELLGILYHQLQLFQ 163
L + + K M + LG + ++L+ Q
Sbjct: 124 LNHIGVVERKLMRIMHTSADYTWLGKIENELRESQ 158
>sp|P44842|Y722_HAEIN IMPACT family member HI_0722 OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=HI_0722 PE=3 SV=1
Length = 206
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 19 KETVTFEKEIKKSKFIAIAGPISNEQSAQSFLSQVSD--PRATHNCWAYKVGN-----QY 71
K V FE+EIKKS+FI + A++F +++ P A H+CWA G Q
Sbjct: 8 KSAVVFEEEIKKSRFITYLQHTEGLEDARAFWAKIKQEHPNARHHCWAAVAGKPTDSLQL 67
Query: 72 RSNDDGEPSGTAGKPIHSAIVSSGLDRIMVVVTRYFGGIKLGTGGLVRAYGGVASECLRN 131
+DDGEP+GTAGKP+ SA+ S L I VV RY+GGI LGTGGLVRAYG + L+
Sbjct: 68 GFSDDGEPAGTAGKPMLSALQGSQLGEISAVVVRYYGGILLGTGGLVRAYGNGVQQALKL 127
Query: 132 APTILVKSRVPMGVEVPFELLGILYHQLQLFQVEDTNQDYDT 173
+ + R ++ + L ++ + +QVE +Q +
Sbjct: 128 IESEIKVERTLFKLDCDYGQLRLVQQLCEKYQVEILSQGFQA 169
>sp|P27862|YIGZ_ECOLI IMPACT family member YigZ OS=Escherichia coli (strain K12) GN=yigZ
PE=1 SV=2
Length = 204
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 84/145 (57%), Gaps = 14/145 (9%)
Query: 22 VTFEKEIKKSKFIAIAGPISNEQSAQSFLSQV--SDPRATHNCWAYKVG-----NQYRSN 74
VT +EIKKS+FI + ++A++F+ V P A H+C A+ G Q +
Sbjct: 11 VTVVEEIKKSRFITMLAHTDGVEAAKAFVESVRAEHPDARHHCVAWVAGAPDDSQQLGFS 70
Query: 75 DDGEPSGTAGKPIHSAIVSSGLDRIMVVVTRYFGGIKLGTGGLVRAYGGVASECLRNAPT 134
DDGEP+GTAGKP+ + ++ SG+ I VV RY+GGI LGTGGLV+AYGG ++ LR T
Sbjct: 71 DDGEPAGTAGKPMLAQLMGSGVGEITAVVVRYYGGILLGTGGLVKAYGGGVNQALRQLTT 130
Query: 135 ILVKSRVPMGVEVPFELLGILYHQL 159
+ + P+ L YHQL
Sbjct: 131 ---QRKTPLTEYT----LQCEYHQL 148
>sp|Q54JW9|IMPCT_DICDI Protein IMPACT homolog OS=Dictyostelium discoideum GN=impact PE=3
SV=1
Length = 345
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 29 KKSKFIAIAGPISNEQSAQSFLSQVSDPR----ATHNCWAYKVG------NQYRSNDDGE 78
KKSKF A + +E+ Q L+Q+ + ATHN +AY+ N+Y NDDGE
Sbjct: 223 KKSKFQAHLAIVHSEREVQLVLNQLLSFKKIYEATHNMYAYRFQLENGEINEYY-NDDGE 281
Query: 79 PSGTAGKPIHSAIVSSGLDRIMVVVTRYFGGIKLG 113
AG + + + I++V TR+FGGI LG
Sbjct: 282 DG--AGDKMLFTLSKNQAKEILIVCTRWFGGILLG 314
>sp|Q9P2X3|IMPCT_HUMAN Protein IMPACT OS=Homo sapiens GN=IMPACT PE=1 SV=2
Length = 320
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 29 KKSKFIAIAGPISNEQSAQSFLSQVSDPR----ATHNCWAYKVGNQYR------SNDDGE 78
++S F A P+ + + LS++ + + ATHN +AY++ + + DDGE
Sbjct: 182 RRSTFQAHLAPVVCPKQVKMVLSKLYENKKIASATHNIYAYRIYCEDKQTFLQDCEDDGE 241
Query: 79 PSGTAGKPIHSAIVSSGLDRIMVVVTRYFGGIKLG 113
+ G+ +H + + + +MVVV+R++GGI LG
Sbjct: 242 -TAAGGRLLHLMEILN-VKNVMVVVSRWYGGILLG 274
>sp|Q9W625|IMPCT_XENLA Protein IMPACT OS=Xenopus laevis GN=impact PE=2 SV=1
Length = 312
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 29 KKSKFIAIAGPISNEQSAQSFLSQVSDPR----ATHNCWAYKVGNQYRSN------DDGE 78
++S F A P+ + + L+++ + + ATHN +AY++ + R++ DDGE
Sbjct: 179 RRSTFQAHLAPVVSPYQVKLILNKLYENKKIATATHNIYAYRIYIKERNSFIQDCEDDGE 238
Query: 79 PSGTAGKPIHSAIVSSGLDRIMVVVTRYFGGIKLG 113
+ + +H + D +MVVV+R++GGI LG
Sbjct: 239 -TAAGKRMLHLMQILDARD-VMVVVSRWYGGILLG 271
>sp|Q5M8G6|IMPTA_XENTR Protein IMPACT-A OS=Xenopus tropicalis GN=impact-A PE=2 SV=1
Length = 318
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 29 KKSKFIAIAGPISNEQSAQSFLSQVSDPR----ATHNCWAYKVGNQYRSN------DDGE 78
++S F A P+ + + L+++ + + ATHN +AY++ + R++ DDGE
Sbjct: 179 RRSTFQAHLAPVVSPYQVKLILNKLYENKKIATATHNIYAYRIYIKERNSFIQDCEDDGE 238
Query: 79 PSGTAGKPIHSAIVSSGLDRIMVVVTRYFGGIKLG 113
+ + +H + D +MVVV+R++GGI LG
Sbjct: 239 -TAAGKRMLHLMQILDARD-VMVVVSRWYGGILLG 271
>sp|A7YY45|IMPCT_BOVIN Protein IMPACT OS=Bos taurus GN=IMPACT PE=2 SV=2
Length = 318
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 29 KKSKFIAIAGPISNEQSAQSFLSQVSDPR----ATHNCWAYKVGNQYRS------NDDGE 78
++S F A P+ + + L+++ + + ATHN +AY++ + + DDGE
Sbjct: 180 RRSTFQAHLAPVVCPKQVKMVLAKLYENKKIASATHNIYAYRIYCEDKQTFLQDCEDDGE 239
Query: 79 PSGTAGKPIHSAIVSSGLDRIMVVVTRYFGGIKLG 113
+ G+ +H + + D +MVVV+R++GG+ LG
Sbjct: 240 -TAAGGRLLHLMEILNVRD-VMVVVSRWYGGVLLG 272
>sp|O55091|IMPCT_MOUSE Protein IMPACT OS=Mus musculus GN=Impact PE=1 SV=2
Length = 318
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 29 KKSKFIAIAGPISNEQSAQSFLSQVSDPR----ATHNCWAYKVGNQYRS------NDDGE 78
++S F A P+ + + L+++ + + ATHN +AY++ + + DDGE
Sbjct: 181 RRSTFQAHVAPVVCPEQVKLVLAKLYENKKIASATHNIYAYRIFCEDKQTFLQDCEDDGE 240
Query: 79 PSGTAGKPIHSAIVSSGLDRIMVVVTRYFGGIKLG 113
+ G+ +H + + + +MVVV+R++GGI LG
Sbjct: 241 -TAAGGRLLHLMEILN-VKNVMVVVSRWYGGILLG 273
>sp|Q5GFD9|IMPCT_RAT Protein IMPACT OS=Rattus norvegicus GN=Impact PE=2 SV=1
Length = 317
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 29 KKSKFIAIAGPISNEQSAQSFLSQVSDPR----ATHNCWAYKVGNQYR------SNDDGE 78
++S F A P+ + L+++ + + ATHN +AY++ + + S DDGE
Sbjct: 180 RRSTFQAHLAPVVCIDQVKKVLAKLYENKKIASATHNIYAYRIYCEDKQTFLQDSEDDGE 239
Query: 79 PSGTAGKPIHSAIVSSGLDRIMVVVTRYFGGIKLG 113
+ G+ +H + + + +MVVV+R++GGI LG
Sbjct: 240 -TAAGGRLLHLMEILN-VKNVMVVVSRWYGGILLG 272
>sp|A9UMG5|IMPTB_XENTR Protein IMPACT-B OS=Xenopus tropicalis GN=impact-B PE=2 SV=1
Length = 317
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 29 KKSKFIAIAGPISNEQSAQSFLSQVSDPR----ATHNCWAYKVGNQYRSN------DDGE 78
++S F + N + Q L+++ + + ATHN +AY++ Q +++ DDGE
Sbjct: 182 RRSTFQPHLSAVENPKQVQRVLNKLYENKKIASATHNIYAYRIYCQEKNSVLQDCEDDGE 241
Query: 79 PSGTAGKPIHSAIVSSGLDRIMVVVTRYFGGIKLG 113
+ G+ +H + + ++VVV+R++GGI LG
Sbjct: 242 -TAAGGRLLHLLQILD-VRNVLVVVSRWYGGILLG 274
>sp|Q642J4|IMPCT_DANRE Protein IMPACT OS=Danio rerio GN=impact PE=2 SV=1
Length = 317
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 29 KKSKFIAIAGPISNEQSAQSFLSQVSDPR----ATHNCWAYKVGNQYRSN------DDGE 78
++S F + N + Q L+++ + + ATHN +AY++ Q +++ DDGE
Sbjct: 182 RRSTFQPHLSAVENPKQVQRVLNKLYENKKIASATHNIYAYRIYCQEKNSVLQDCEDDGE 241
Query: 79 PSGTAGKPIHSAIVSSGLDRIMVVVTRYFGGIKLG 113
+ G+ +H + + ++VVV+R++GGI LG
Sbjct: 242 -TAAGGRLLHLLQILD-VRNVLVVVSRWYGGILLG 274
>sp|O13997|YIH1_SCHPO Protein IMPACT homolog OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=yih1 PE=3 SV=1
Length = 280
Score = 38.5 bits (88), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 29 KKSKFIAIAGPI-SNEQSAQSFLSQVSD---PRATHNCWAYKV----GNQYRSNDDGEPS 80
+KS F+A A + S E+ ++ D +A HN AY++ GN + NDD S
Sbjct: 153 RKSTFMAHATRVYSTEEVREALEDLYMDKKVAKANHNMVAYRIISPNGNVIQDNDDDGES 212
Query: 81 GTAGKPIHSAIVSSGLDRIMVVVTRYFGGIKLG 113
+ H + S + + V V+R+FGG+ +G
Sbjct: 213 AAGSRMSHLLTMMSA-ENVFVCVSRWFGGVHIG 244
>sp|Q9XWF4|IMPCT_CAEEL Protein IMPACT homolog OS=Caenorhabditis elegans GN=Y52B11A.2 PE=3
SV=1
Length = 257
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 10/65 (15%)
Query: 57 RATHNCWAY--------KVGNQYRSNDDGEPSGTAGKPIHSAIVSSGLDRIMVVVTRYFG 108
RATHN AY K + + DDGE G + K + + D +MVVV+R++G
Sbjct: 170 RATHNITAYRYMTEINGKPIHHHDCVDDGE-FGASSKML-ELMDRMKADNVMVVVSRWYG 227
Query: 109 GIKLG 113
GI LG
Sbjct: 228 GIHLG 232
>sp|P97468|CML1_MOUSE Chemokine-like receptor 1 OS=Mus musculus GN=Cmklr1 PE=1 SV=1
Length = 371
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 19/131 (14%)
Query: 82 TAGKPIHSAIVSSGLDR-IMVVVTRYFGGIKLGTGGLVRAYGGVASECLRNAPTILVKSR 140
++ P HS +VS+G R + V VTR+ G + + Y + + RN L K++
Sbjct: 198 SSPHPAHSQVVSTGYSRHVAVTVTRFLCGFLIPVFIITACYLTIVFKLQRNR---LAKNK 254
Query: 141 VPM----GVEVPFELLGILYHQLQLFQVEDTNQDYDTGKDGIAMVTFKVDFDRAENLEDA 196
P + + F L YH L L ++ T G+ + T A
Sbjct: 255 KPFKIIITIIITFFLCWCPYHTLYLLELHHTAVPSSVFSLGLPLAT-----------AVA 303
Query: 197 IKNNCRRDLVF 207
I N+C +++
Sbjct: 304 IANSCMNPILY 314
>sp|P25637|YIH1_YEAST Protein IMPACT homolog OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YIH1 PE=1 SV=1
Length = 258
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 29 KKSKFIAIAGPISNEQSAQSFLSQVSDP----RATHNCWAYKVGNQ-----YR-SNDDGE 78
+ S F+A A +++E+ A + L + +A H A+++ Y+ S+DDGE
Sbjct: 144 RGSTFMAFAAHVTSEEQAFAMLDLLKTDSKMRKANHVMSAWRIKQDGSAATYQDSDDDGE 203
Query: 79 PSGTAGKPIHSAIVSSGLDRIMVVVTRYFGGIKLG 113
+ AG + I + ++VVV R+FGG +G
Sbjct: 204 TA--AGSRMLHLITIMDVWNVIVVVARWFGGAHIG 236
>sp|Q8CP96|DAPA_STAES 4-hydroxy-tetrahydrodipicolinate synthase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=dapA PE=3 SV=1
Length = 294
Score = 33.9 bits (76), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 95 GLDRIMVVVTRYFGGIKLGTGGLVRAYGGVASECLRNAPTIL--VKSRVPMGVEVPFELL 152
G D +M++ T Y+ K GL++ + +A+E P IL V SR M +E E +
Sbjct: 98 GADAVMLI-TPYYN--KTNQRGLIQHFETIANEV--KLPVILYNVPSRTNMTIEP--ETV 150
Query: 153 GILYHQLQLFQVEDTNQDYD 172
GIL H + ++D D+D
Sbjct: 151 GILSHNPYIVALKDATNDFD 170
>sp|Q4PAB2|TOF1_USTMA Topoisomerase 1-associated factor 1 OS=Ustilago maydis (strain 521
/ FGSC 9021) GN=TOF1 PE=3 SV=1
Length = 1251
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 3 TSGSSSNNNAGAFTTIKETVTFEKEIKKSKFIAIAGPISNEQS 45
T+GSSSN NAG +++ E++ E ++K++ + +G I+ S
Sbjct: 339 TAGSSSNANAGPISSLAESLAMETKLKRA---SASGKIATRHS 378
>sp|Q9HAS0|NJMU_HUMAN Protein Njmu-R1 OS=Homo sapiens GN=C17orf75 PE=1 SV=2
Length = 396
Score = 30.8 bits (68), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Query: 41 SNEQSAQSFLSQVSDPRATHNC-WAYK---VGNQYRSNDDGEPSGT-----AGKPIHSAI 91
S+E+ + ++ P ++H C ++Y+ + Q ++DG PSGT +G ++
Sbjct: 18 SSEEGGSAEERRLEPPSSSHYCLYSYRGSRLAQQRGDSEDGSPSGTNAETPSGDDFSLSL 77
Query: 92 VSSGLDRIMVVVTRYFGGIKLGTGGLVRAYGGVAS 126
+ L + R F +L G + G VAS
Sbjct: 78 ADTNLPSEVEPELRSFIAKRLSRGAVFEGLGNVAS 112
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,416,386
Number of Sequences: 539616
Number of extensions: 3253235
Number of successful extensions: 7473
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 7459
Number of HSP's gapped (non-prelim): 26
length of query: 210
length of database: 191,569,459
effective HSP length: 112
effective length of query: 98
effective length of database: 131,132,467
effective search space: 12850981766
effective search space used: 12850981766
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)