BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028329
(210 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302142732|emb|CBI19935.3| unnamed protein product [Vitis vinifera]
Length = 307
Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/210 (87%), Positives = 204/210 (97%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
+ SS+SQ EFDYLFKLL+IGDSGVGKS+LLLSFTS+ FE+LSPTIGVDFKVK+V++GGK
Sbjct: 98 LPDSSSSQPEFDYLFKLLLIGDSGVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGK 157
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
KLKLAIWDTAGQERFRTLTSSYYRGAQG+IMVYDVTRR+TFTNLSD+WAKEIDLYSTNQD
Sbjct: 158 KLKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 217
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
CIK+LVGNKVDKESERVVTKKEGI+FAREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TP
Sbjct: 218 CIKMLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETP 277
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SLLAEGS G++KNIFKQKPPE+DA+ SGCC
Sbjct: 278 SLLAEGSSGVRKNIFKQKPPESDASTSGCC 307
>gi|225457841|ref|XP_002267387.1| PREDICTED: ras-related protein RABC1 isoform 1 [Vitis vinifera]
gi|359492296|ref|XP_003634396.1| PREDICTED: ras-related protein RABC1 [Vitis vinifera]
Length = 211
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/210 (87%), Positives = 204/210 (97%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
+ SS+SQ EFDYLFKLL+IGDSGVGKS+LLLSFTS+ FE+LSPTIGVDFKVK+V++GGK
Sbjct: 2 LPDSSSSQPEFDYLFKLLLIGDSGVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGK 61
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
KLKLAIWDTAGQERFRTLTSSYYRGAQG+IMVYDVTRR+TFTNLSD+WAKEIDLYSTNQD
Sbjct: 62 KLKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 121
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
CIK+LVGNKVDKESERVVTKKEGI+FAREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TP
Sbjct: 122 CIKMLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETP 181
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SLLAEGS G++KNIFKQKPPE+DA+ SGCC
Sbjct: 182 SLLAEGSSGVRKNIFKQKPPESDASTSGCC 211
>gi|388517279|gb|AFK46701.1| unknown [Lotus japonicus]
Length = 209
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/210 (90%), Positives = 202/210 (96%), Gaps = 1/210 (0%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
MDSSSA Q EFDYLFKLLMIGDSGVGKSSLLLSFTSD F+++SPTIGVDFKVKYV +GGK
Sbjct: 1 MDSSSAPQ-EFDYLFKLLMIGDSGVGKSSLLLSFTSDEFQDMSPTIGVDFKVKYVAIGGK 59
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLS++WAKEIDLYSTNQD
Sbjct: 60 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQD 119
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
CIK+LVGNKVDKES+RVV+KKEGI+FAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP
Sbjct: 120 CIKMLVGNKVDKESDRVVSKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SLLAEGSKG+KKNIFK K P+ADA+ S CC
Sbjct: 180 SLLAEGSKGVKKNIFKDKQPQADASTSSCC 209
>gi|224093425|ref|XP_002309918.1| predicted protein [Populus trichocarpa]
gi|222852821|gb|EEE90368.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/210 (89%), Positives = 202/210 (96%), Gaps = 1/210 (0%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
MDSSS+S EFDYLFKLLMIGDSGVGKSSLLLSFTSD FE+LSPTIGVDFKVK+V++GGK
Sbjct: 1 MDSSSSSP-EFDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLSPTIGVDFKVKFVNIGGK 59
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
KLKLAIWDTAGQERFRTLTSSYYRGAQGI+MVYDVTRRDTFTNLS++WAKEIDLYSTNQD
Sbjct: 60 KLKLAIWDTAGQERFRTLTSSYYRGAQGIVMVYDVTRRDTFTNLSEIWAKEIDLYSTNQD 119
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
CIKLLVGNKVDKES+RVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLK+LDTP
Sbjct: 120 CIKLLVGNKVDKESDRVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKVLDTP 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SLLAEGSKG+KKNIF +K P+ DA+ S CC
Sbjct: 180 SLLAEGSKGVKKNIFNEKRPQPDASTSSCC 209
>gi|1370174|emb|CAA98164.1| RAB1Y [Lotus japonicus]
Length = 207
Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/207 (89%), Positives = 200/207 (96%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLK 63
SS++ QEFDYLFKLLMIGDSGVGKSSLLLSFTSD F+++SPTIGVDFKVKYV +GGKKLK
Sbjct: 1 SSSAPQEFDYLFKLLMIGDSGVGKSSLLLSFTSDEFQDMSPTIGVDFKVKYVAIGGKKLK 60
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLS++WAKEIDLYSTNQDCIK
Sbjct: 61 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDCIK 120
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+LVGNKVDKES+RVV+KKEGI+FAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL
Sbjct: 121 MLVGNKVDKESDRVVSKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 180
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
AEGSKG+KKNIFK K P+ADA+ S CC
Sbjct: 181 AEGSKGVKKNIFKDKQPQADASTSSCC 207
>gi|363808158|ref|NP_001242481.1| uncharacterized protein LOC100787603 [Glycine max]
gi|255639535|gb|ACU20062.1| unknown [Glycine max]
gi|255639578|gb|ACU20083.1| unknown [Glycine max]
Length = 209
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/210 (88%), Positives = 201/210 (95%), Gaps = 1/210 (0%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
MDSSS QEFDYLFKLLMIGDSGVGKSSLLLSFTSD FE+LSPTIGVDFKVKYV +GGK
Sbjct: 1 MDSSS-EHQEFDYLFKLLMIGDSGVGKSSLLLSFTSDAFEDLSPTIGVDFKVKYVTMGGK 59
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
KLKLAIWDTAGQERFRTLT+SYYRGAQGIIMVYDVTRR TFTNLS++WAKEIDLYSTNQD
Sbjct: 60 KLKLAIWDTAGQERFRTLTNSYYRGAQGIIMVYDVTRRGTFTNLSEIWAKEIDLYSTNQD 119
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
CIK+LVGNKVDKE +RVVTKKEGI+FAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP
Sbjct: 120 CIKMLVGNKVDKEGDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SL+AEGSKG+KKNIFK++PP++DA+ S CC
Sbjct: 180 SLIAEGSKGVKKNIFKERPPQSDASTSSCC 209
>gi|449459232|ref|XP_004147350.1| PREDICTED: ras-related protein RABC1-like [Cucumis sativus]
gi|449513301|ref|XP_004164289.1| PREDICTED: ras-related protein RABC1-like [Cucumis sativus]
Length = 209
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/210 (88%), Positives = 200/210 (95%), Gaps = 1/210 (0%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
MDS+S +Q EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE+LSPTIGVDFKVKYV GGK
Sbjct: 1 MDSTS-NQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGK 59
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLS+VWAKEIDLYSTNQD
Sbjct: 60 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQD 119
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
CIK+LVGNKVDKES R VTKKEGI+ AREYGCLF ECSAKTRVNVQQCFEELVLKILDTP
Sbjct: 120 CIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTP 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SLL+EGSKG+++NIFK+KPP++DA+ S CC
Sbjct: 180 SLLSEGSKGVRRNIFKEKPPQSDASTSSCC 209
>gi|351721968|ref|NP_001235436.1| uncharacterized protein LOC100526880 [Glycine max]
gi|255631052|gb|ACU15890.1| unknown [Glycine max]
Length = 209
Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/210 (88%), Positives = 200/210 (95%), Gaps = 1/210 (0%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
MDSSS QEFDYLFKLLMIGDSGVGKSSLLLSFTSD FE+LSPTIGVD KVKYV +GGK
Sbjct: 1 MDSSSG-HQEFDYLFKLLMIGDSGVGKSSLLLSFTSDAFEDLSPTIGVDIKVKYVMMGGK 59
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLS++WAKEIDLYSTNQD
Sbjct: 60 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQD 119
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
CIK+L GNK+DK+ +RVVTKKEGI+FAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP
Sbjct: 120 CIKMLAGNKLDKDGDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SL+AEGSKG+KKNIFK +PP++DA+AS CC
Sbjct: 180 SLIAEGSKGVKKNIFKDRPPQSDASASSCC 209
>gi|224080973|ref|XP_002306250.1| predicted protein [Populus trichocarpa]
gi|222855699|gb|EEE93246.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/210 (88%), Positives = 199/210 (94%), Gaps = 1/210 (0%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
MDSSS + EFDYLFKLLMIGDSGVGKSSLLLSFTSD FE+LSPTIGVDFKVK+V++GGK
Sbjct: 1 MDSSS-NAPEFDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLSPTIGVDFKVKFVNIGGK 59
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLS++WAKEIDLYSTNQD
Sbjct: 60 NLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQD 119
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
CIK+LVGNKVDKES+R VTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP
Sbjct: 120 CIKMLVGNKVDKESDRAVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SLLAEGSKG+KKNIF +K P+ DA+ S CC
Sbjct: 180 SLLAEGSKGVKKNIFSEKRPQPDASTSSCC 209
>gi|224062966|ref|XP_002300952.1| predicted protein [Populus trichocarpa]
gi|222842678|gb|EEE80225.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/210 (86%), Positives = 199/210 (94%), Gaps = 1/210 (0%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
M+ S SQQEF+YLFKLL+IGDSGVGKS+LLLSFTS NFE+LSPTIGVDFKVK+V +GGK
Sbjct: 1 MEVPSTSQQEFEYLFKLLLIGDSGVGKSTLLLSFTSKNFEDLSPTIGVDFKVKHVTIGGK 60
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLS++WAKEIDLYSTNQD
Sbjct: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQD 120
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
CIK+LVGNKVDKESERVVTKKEGI+FAREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TP
Sbjct: 121 CIKMLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETP 180
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SLLAEGS G+KKN+FKQKPPE D S CC
Sbjct: 181 SLLAEGSSGVKKNVFKQKPPE-DVTTSSCC 209
>gi|357519975|ref|XP_003630276.1| Ras-related protein Rab-18-B [Medicago truncatula]
gi|355524298|gb|AET04752.1| Ras-related protein Rab-18-B [Medicago truncatula]
gi|388503306|gb|AFK39719.1| unknown [Medicago truncatula]
Length = 208
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/210 (88%), Positives = 202/210 (96%), Gaps = 2/210 (0%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
MDSSS QQEFDY+FKLLMIGDSGVGKSSLLL FTSD+F++LSPTIGVDFKVKYV + GK
Sbjct: 1 MDSSSG-QQEFDYMFKLLMIGDSGVGKSSLLLRFTSDDFDDLSPTIGVDFKVKYVTIEGK 59
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLS++WAKEIDLYSTNQD
Sbjct: 60 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQD 119
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
C+K+LVGNKVDKE +RVVTKKEGI+FAREYGCLFIECSAKTRVNVQQCFEELVLK+LDTP
Sbjct: 120 CMKMLVGNKVDKEGDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKVLDTP 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SLLAEGSKG+KKNIFK K P++DA+ASGCC
Sbjct: 180 SLLAEGSKGVKKNIFKDK-PQSDASASGCC 208
>gi|449458101|ref|XP_004146786.1| PREDICTED: ras-related protein RABC1-like isoform 1 [Cucumis
sativus]
gi|449458103|ref|XP_004146787.1| PREDICTED: ras-related protein RABC1-like isoform 2 [Cucumis
sativus]
gi|449529576|ref|XP_004171774.1| PREDICTED: ras-related protein RABC1-like isoform 1 [Cucumis
sativus]
gi|449529578|ref|XP_004171775.1| PREDICTED: ras-related protein RABC1-like isoform 2 [Cucumis
sativus]
Length = 213
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/208 (86%), Positives = 198/208 (95%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKL 62
+ S+SQ EFDYLFKLL+IGDSGVGKS+LLL FTSD+FE+LSPTIGVDFK+K+V VGGKKL
Sbjct: 4 APSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKL 63
Query: 63 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCI 122
KLAIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRR+TFTNLSD+WAKEIDLYSTNQDCI
Sbjct: 64 KLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCI 123
Query: 123 KLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
K+LVGNKVDKESERVV+KKEGI+FAREYGCLF+ECSAKTRVNV+QCF+ELVLKILDTPSL
Sbjct: 124 KMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSL 183
Query: 183 LAEGSKGLKKNIFKQKPPEADAAASGCC 210
LA+GS GLKKNIFK+KPPE +A GCC
Sbjct: 184 LADGSTGLKKNIFKEKPPETTTSAGGCC 211
>gi|226503041|ref|NP_001149268.1| ras-related protein Rab-18 [Zea mays]
gi|195625924|gb|ACG34792.1| ras-related protein Rab-18 [Zea mays]
gi|223972897|gb|ACN30636.1| unknown [Zea mays]
gi|413920116|gb|AFW60048.1| Ras protein Rab-18 [Zea mays]
Length = 215
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/203 (88%), Positives = 193/203 (95%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIW 67
Q EFDYLFKLL+IGDSGVGKSSLLL FT+D+FE+LSPTIGVDFKVK V +GGKKLKLAIW
Sbjct: 13 QPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVTIGGKKLKLAIW 72
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRTLTSSYYRGAQG+IMVYDVTRR+TFTNLSD+WAKEIDLYSTNQDCIK+LVG
Sbjct: 73 DTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVG 132
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NKVDKESER VTKKEGI FAREYGCLF+ECSAKT+VNV+QCFEELVLKILDTPSLLA+ S
Sbjct: 133 NKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADAS 192
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
G KKNIFKQKPPEADAAAS CC
Sbjct: 193 SGAKKNIFKQKPPEADAAASSCC 215
>gi|242077810|ref|XP_002448841.1| hypothetical protein SORBIDRAFT_06g034200 [Sorghum bicolor]
gi|241940024|gb|EES13169.1| hypothetical protein SORBIDRAFT_06g034200 [Sorghum bicolor]
Length = 215
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/203 (89%), Positives = 193/203 (95%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIW 67
Q EFDYLFKLL+IGDSGVGKSSLLL FT+D+FE+LSPTIGVDFKVK V +GGKKLKLAIW
Sbjct: 13 QPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVSIGGKKLKLAIW 72
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSD+WAKEIDLYSTNQDCIK+LVG
Sbjct: 73 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVG 132
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NKVDKESER VTKKEGI FAREYGCLF+ECSAKT+VNV+QCFEELVLKILDTPSLLA+ S
Sbjct: 133 NKVDKESERCVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADAS 192
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
G KKNIFKQKPPEADAAAS CC
Sbjct: 193 SGAKKNIFKQKPPEADAAASSCC 215
>gi|359806090|ref|NP_001241441.1| uncharacterized protein LOC100794330 [Glycine max]
gi|255645015|gb|ACU23007.1| unknown [Glycine max]
Length = 214
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/203 (88%), Positives = 196/203 (96%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIW 67
Q EFDYLFKLL+IGDSGVGKS+LLLSFTSD FE+LSPTIGVDFKVKYV +GGKKLKLAIW
Sbjct: 10 QPEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTIGGKKLKLAIW 69
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSD+WAKEIDLYSTNQDCIK+LVG
Sbjct: 70 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVG 129
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NKVDKESERVV+KKEGI+FAREYGCL+ ECSAKTRVNV QCF+ELV+KIL+TPSLLAEGS
Sbjct: 130 NKVDKESERVVSKKEGIDFAREYGCLYTECSAKTRVNVTQCFDELVMKILETPSLLAEGS 189
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
G+KKNIFKQKPP +DA++SGCC
Sbjct: 190 SGVKKNIFKQKPPLSDASSSGCC 212
>gi|351725909|ref|NP_001235829.1| uncharacterized protein LOC100499773 [Glycine max]
gi|255626443|gb|ACU13566.1| unknown [Glycine max]
Length = 215
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/204 (87%), Positives = 197/204 (96%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAI 66
+Q EFDYLFKLL+IGDSGVGKS+LLLSFTSD FE+LSPTIGVDFKVKYV +GGKK KLAI
Sbjct: 10 TQPEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTMGGKKSKLAI 69
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSD+WAKEIDLYSTNQDCIK+LV
Sbjct: 70 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLV 129
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG 186
GNKVDKESERVV+KKEGI+FAREYGCL+ ECSAKTRVNV QCF+ELV+KIL+TPSLLAEG
Sbjct: 130 GNKVDKESERVVSKKEGIDFAREYGCLYTECSAKTRVNVAQCFDELVMKILETPSLLAEG 189
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
S G+KKNIFKQKPP++DA++SGCC
Sbjct: 190 SSGVKKNIFKQKPPQSDASSSGCC 213
>gi|255558462|ref|XP_002520256.1| protein phosphatase 2c, putative [Ricinus communis]
gi|223540475|gb|EEF42042.1| protein phosphatase 2c, putative [Ricinus communis]
Length = 571
Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/207 (86%), Positives = 196/207 (94%), Gaps = 1/207 (0%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLK 63
SS+SQ EFDYLFKLL+IGDSGVGKSSLLLSFTS+ F++LSPTIGVDFKVK+V +GGKKLK
Sbjct: 3 SSSSQPEFDYLFKLLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKHVTIGGKKLK 62
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSD+WAKEIDLYSTNQDCIK
Sbjct: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIK 122
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+LVGNKVDKESE VVTKKEGI FAR+YGCLF+ECSAKTRVNV+QCFEELVLKIL+TPSLL
Sbjct: 123 MLVGNKVDKESEIVVTKKEGIEFARQYGCLFLECSAKTRVNVEQCFEELVLKILETPSLL 182
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
AEGS G+K+NIFKQKPP+ D S CC
Sbjct: 183 AEGSSGVKRNIFKQKPPQ-DVPTSSCC 208
>gi|357166898|ref|XP_003580906.1| PREDICTED: ras-related protein RABC1-like [Brachypodium distachyon]
Length = 215
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/206 (86%), Positives = 194/206 (94%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKL 64
+A Q +FDYLFKLL+IGDSGVGKSSLLL FT+D+FE+LSPTIGVDFKVK V++ GKKLKL
Sbjct: 10 TAQQPDFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVNIAGKKLKL 69
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSD+WAKEIDLYSTNQDCIK+
Sbjct: 70 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 129
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
LVGNKVDKESER VTKKEGI FAREYGCLF+ECSAKT+VNV+QCFEELVLKILDTPSLLA
Sbjct: 130 LVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLA 189
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
+ S G KKNIFKQK PEADAAA GCC
Sbjct: 190 DASSGAKKNIFKQKAPEADAAAGGCC 215
>gi|255558460|ref|XP_002520255.1| protein with unknown function [Ricinus communis]
gi|223540474|gb|EEF42041.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/206 (86%), Positives = 196/206 (95%), Gaps = 1/206 (0%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKL 64
S +Q +F+YLFKLL+IGDSGVGKSSLLLSFTS+ F++LSPTIGVDFKV+YV +GGKKLKL
Sbjct: 4 SPNQSDFEYLFKLLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVQYVTIGGKKLKL 63
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSD+WAKEIDLYSTNQDCIK+
Sbjct: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKM 123
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
LVGNKVDKESERVV+KKEGI+FAR+YGCLFIECSAKTR NV+QCFEELVLKIL+TPSLLA
Sbjct: 124 LVGNKVDKESERVVSKKEGIDFARQYGCLFIECSAKTRANVEQCFEELVLKILETPSLLA 183
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
EGS G+KKNIFKQKPP+ D A S CC
Sbjct: 184 EGSSGVKKNIFKQKPPQ-DVATSSCC 208
>gi|357464685|ref|XP_003602624.1| GTP-binding protein yptV3 [Medicago truncatula]
gi|355491672|gb|AES72875.1| GTP-binding protein yptV3 [Medicago truncatula]
gi|388519551|gb|AFK47837.1| unknown [Medicago truncatula]
Length = 207
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/210 (87%), Positives = 196/210 (93%), Gaps = 3/210 (1%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
MDSS+ QEFDY+FKLLMIGDSGVGKSSLLL FTSD+FE LSPTIGVDFKVKY + GK
Sbjct: 1 MDSSTP--QEFDYVFKLLMIGDSGVGKSSLLLCFTSDSFENLSPTIGVDFKVKYFTIDGK 58
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
KLKLAIWDTAGQERFRTLTSSYYRGAQGIIM YDVTRRDTFTNLS+VWAKE+DLYSTNQD
Sbjct: 59 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQD 118
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
CIK+LVGNKVDKES+RVVTKKEGI+FAREYGCLFIECSAKTRVNVQ CFEELVLKILDTP
Sbjct: 119 CIKMLVGNKVDKESDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQHCFEELVLKILDTP 178
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SLLAEGSKG KKNIFK K P++DA+ SGCC
Sbjct: 179 SLLAEGSKGNKKNIFKDK-PQSDASTSGCC 207
>gi|217075322|gb|ACJ86021.1| unknown [Medicago truncatula]
Length = 207
Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/210 (87%), Positives = 195/210 (92%), Gaps = 3/210 (1%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
MDSS+ QEFDY+FKLLMIGDSGVGKSSLLL FTSD+FE LSPTIGVDFKVKY + GK
Sbjct: 1 MDSSTP--QEFDYVFKLLMIGDSGVGKSSLLLCFTSDSFENLSPTIGVDFKVKYFTIDGK 58
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
KLKLAIWDTAGQERFRTLTSSYYRGAQGIIM YDVTRRDTFTNLS+VWAKE+DLYSTNQD
Sbjct: 59 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQD 118
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
CIK+LVGNKVDKES+RVVTKKEGI+FAREYGCLFIECSAKTRVNVQ CFEELVLKILDTP
Sbjct: 119 CIKMLVGNKVDKESDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQHCFEELVLKILDTP 178
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SLLAE SKG KKNIFK K P++DA+ SGCC
Sbjct: 179 SLLAESSKGNKKNIFKDK-PQSDASTSGCC 207
>gi|218195901|gb|EEC78328.1| hypothetical protein OsI_18064 [Oryza sativa Indica Group]
Length = 213
Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 178/208 (85%), Positives = 191/208 (91%), Gaps = 4/208 (1%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKL 62
+ + SQ +FDYLFKLL+IGDSGVGKSSLLL FTSD FE+LSPTIGVDFKVK V+ GGKKL
Sbjct: 10 TQAQSQPDFDYLFKLLLIGDSGVGKSSLLLRFTSDAFEDLSPTIGVDFKVKMVNTGGKKL 69
Query: 63 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCI 122
KLAIWDTAGQERFRTLTSSYYRGAQ VYDVTRR+TFTNLSD+WAKEIDLYSTNQDCI
Sbjct: 70 KLAIWDTAGQERFRTLTSSYYRGAQ----VYDVTRRETFTNLSDIWAKEIDLYSTNQDCI 125
Query: 123 KLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
K+LVGNKVDKESER VTKKEGI FAREYGCLF+ECSAKT+VNV+QCFEELVLKILDTPSL
Sbjct: 126 KMLVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSL 185
Query: 183 LAEGSKGLKKNIFKQKPPEADAAASGCC 210
LA+ S G KKNIFKQKPPEADAAAS CC
Sbjct: 186 LADASSGAKKNIFKQKPPEADAAASSCC 213
>gi|308080195|ref|NP_001183679.1| putative NAC domain transcription factor superfamily protein [Zea
mays]
gi|238013812|gb|ACR37941.1| unknown [Zea mays]
gi|414586248|tpg|DAA36819.1| TPA: putative NAC domain transcription factor superfamily protein
[Zea mays]
Length = 215
Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 174/205 (84%), Positives = 189/205 (92%), Gaps = 2/205 (0%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIW 67
Q EFDYLFKLL+IGDSGVGKSSLLL FT+D+F++LSPTIGVDFKVK V +GGKKLKLAIW
Sbjct: 11 QPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFDDLSPTIGVDFKVKMVSIGGKKLKLAIW 70
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRTLTSSYYRGAQGIIMVYDV+RR+TFTNLSD+WAKEIDLYSTNQDC+K+LVG
Sbjct: 71 DTAGQERFRTLTSSYYRGAQGIIMVYDVSRRETFTNLSDIWAKEIDLYSTNQDCVKMLVG 130
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NKVDKESER VTKKEGI FAREYGCLF+ECSAKT+VNV+QCFEELVLKILDTPSLLA+ S
Sbjct: 131 NKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADAS 190
Query: 188 KG--LKKNIFKQKPPEADAAASGCC 210
KKNIFKQK PEADAA CC
Sbjct: 191 SAGVSKKNIFKQKAPEADAATGSCC 215
>gi|356508969|ref|XP_003523225.1| PREDICTED: ras-related protein RABC1-like [Glycine max]
Length = 207
Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 177/209 (84%), Positives = 193/209 (92%), Gaps = 2/209 (0%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
MDSSS QEF+YLFKLLMIGDSGVGKSSLLL FTSD+FE+LSPTIGVDFKVKY+ + GK
Sbjct: 1 MDSSST--QEFEYLFKLLMIGDSGVGKSSLLLCFTSDSFEDLSPTIGVDFKVKYLTMEGK 58
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
KLKLAIWDTAGQERFRTLTSSYYRGAQGIIM YDVTRR+TFTNLS++WAKEIDLYSTN +
Sbjct: 59 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRETFTNLSEIWAKEIDLYSTNPE 118
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
CIK+LVGNKVDKE +RVVTKKEG++FARE GCLFIECSAKTRVNVQQCFEELVLKILDTP
Sbjct: 119 CIKMLVGNKVDKEGDRVVTKKEGVDFARECGCLFIECSAKTRVNVQQCFEELVLKILDTP 178
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGC 209
SLLAEGSKG KKNIFK KP + +A +S C
Sbjct: 179 SLLAEGSKGNKKNIFKDKPSQTNATSSCC 207
>gi|356516366|ref|XP_003526866.1| PREDICTED: ras-related protein RABC1-like [Glycine max]
Length = 207
Score = 358 bits (920), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 173/205 (84%), Positives = 190/205 (92%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKL 64
S+ QEF+YLFKLLMIGDSGVGKSSLLL FTSD+FE+LSPTIGVDFKVKY+ + GKKLKL
Sbjct: 3 SSPTQEFEYLFKLLMIGDSGVGKSSLLLCFTSDSFEDLSPTIGVDFKVKYLTMEGKKLKL 62
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
AIWDTAGQERFRTLTSSYYRGAQGIIM YDVTRR+TFTNLS++WAKEIDLYSTN +C+K+
Sbjct: 63 AIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRETFTNLSEIWAKEIDLYSTNPECVKM 122
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
LVGNKVDKES+RVVTKKEGI+FARE GCLF ECSAKTR NVQQCFEELVLKILDTPSLLA
Sbjct: 123 LVGNKVDKESDRVVTKKEGIDFARECGCLFTECSAKTRANVQQCFEELVLKILDTPSLLA 182
Query: 185 EGSKGLKKNIFKQKPPEADAAASGC 209
EGSKG KKNIFK KP ++DA +S C
Sbjct: 183 EGSKGNKKNIFKDKPSQSDATSSCC 207
>gi|297852170|ref|XP_002893966.1| hypothetical protein ARALYDRAFT_473785 [Arabidopsis lyrata subsp.
lyrata]
gi|297339808|gb|EFH70225.1| hypothetical protein ARALYDRAFT_473785 [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/199 (85%), Positives = 187/199 (93%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLK 63
SS+ Q EFDYLFK+L+IGDSGVGKSSLLLSFTS+ F++LSPTIGVDFKVKY+ +G KKLK
Sbjct: 3 SSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLK 62
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSD+WAKEIDLYSTNQDCIK
Sbjct: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIK 122
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+LVGNKVDKESER V+KKEGI+FAREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TPSL
Sbjct: 123 MLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLT 182
Query: 184 AEGSKGLKKNIFKQKPPEA 202
AEGS G KKNIFKQ P +
Sbjct: 183 AEGSSGGKKNIFKQNPAQT 201
>gi|147809843|emb|CAN76031.1| hypothetical protein VITISV_027716 [Vitis vinifera]
Length = 197
Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 172/210 (81%), Positives = 191/210 (90%), Gaps = 14/210 (6%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
+ SS+SQ EFDYLFKLL+IGDSGVGKS+LLLS VDFKVK+V++GGK
Sbjct: 2 LPDSSSSQPEFDYLFKLLLIGDSGVGKSTLLLS--------------VDFKVKHVNIGGK 47
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
KLKLAIWDTAGQERFRTLTSSYYRGAQG+IMVYDVTRR+TFTNLSD+WAKEIDLYSTNQD
Sbjct: 48 KLKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 107
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
CIK+LVGNKVDKESERVVTKKEGI+FAREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TP
Sbjct: 108 CIKMLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETP 167
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SLLAEGS G++KNIFKQKPPE+DA+ SGCC
Sbjct: 168 SLLAEGSSGVRKNIFKQKPPESDASTSGCC 197
>gi|15218575|ref|NP_175056.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|145324172|ref|NP_001077675.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|186488925|ref|NP_001117435.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|75097949|sp|O23657.1|RABC1_ARATH RecName: Full=Ras-related protein RABC1; Short=AtRABC1; AltName:
Full=Ras-related protein Rab18; Short=AtRab18
gi|7523663|gb|AAF63103.1|AC006423_4 AtRab18 [Arabidopsis thaliana]
gi|13878001|gb|AAK44078.1|AF370263_1 putative GTP-binding protein RAB1Y [Arabidopsis thaliana]
gi|2231312|gb|AAB61997.1| AtRab18 [Arabidopsis thaliana]
gi|17104731|gb|AAL34254.1| putative GTP-binding protein RAB1Y [Arabidopsis thaliana]
gi|21555736|gb|AAM63924.1| GTP-binding protein(RAB1Y), putative [Arabidopsis thaliana]
gi|110743628|dbj|BAE99651.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332193882|gb|AEE32003.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|332193883|gb|AEE32004.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|332193884|gb|AEE32005.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
Length = 212
Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/198 (86%), Positives = 187/198 (94%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLK 63
SS+ Q EFDYLFK+L+IGDSGVGKSSLLLSFTS+ F++LSPTIGVDFKVKY+ +G KKLK
Sbjct: 3 SSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLK 62
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSD+WAKEIDLYSTNQDCIK
Sbjct: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIK 122
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+LVGNKVDKESER V+KKEGI+FAREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TPSL
Sbjct: 123 MLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLT 182
Query: 184 AEGSKGLKKNIFKQKPPE 201
AEGS G KKNIFKQ P +
Sbjct: 183 AEGSSGGKKNIFKQNPAQ 200
>gi|8778652|gb|AAF79660.1|AC022314_1 F9C16.3 [Arabidopsis thaliana]
Length = 233
Score = 345 bits (884), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 171/219 (78%), Positives = 187/219 (85%), Gaps = 21/219 (9%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLK 63
SS+ Q EFDYLFK+L+IGDSGVGKSSLLLSFTS+ F++LSPTIGVDFKVKY+ +G KKLK
Sbjct: 3 SSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLK 62
Query: 64 LAIWDT---------------------AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFT 102
LAIWDT AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFT
Sbjct: 63 LAIWDTVSHCCLSSNVTGEEEESWICNAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFT 122
Query: 103 NLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTR 162
NLSD+WAKEIDLYSTNQDCIK+LVGNKVDKESER V+KKEGI+FAREYGCLF+ECSAKTR
Sbjct: 123 NLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTR 182
Query: 163 VNVQQCFEELVLKILDTPSLLAEGSKGLKKNIFKQKPPE 201
VNV+QCFEELVLKIL+TPSL AEGS G KKNIFKQ P +
Sbjct: 183 VNVEQCFEELVLKILETPSLTAEGSSGGKKNIFKQNPAQ 221
>gi|116781187|gb|ABK21996.1| unknown [Picea sitchensis]
gi|116784353|gb|ABK23312.1| unknown [Picea sitchensis]
Length = 208
Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 156/208 (75%), Positives = 182/208 (87%), Gaps = 1/208 (0%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKL 62
+SS SQ +FD++FKLLMIGDSGVGKSSLLL FTSD+F++LSPTIGVDFK+K + + GK+L
Sbjct: 2 ASSTSQGDFDHVFKLLMIGDSGVGKSSLLLRFTSDSFDDLSPTIGVDFKLKLMTIAGKRL 61
Query: 63 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCI 122
KL IWDTAGQERFRTLTSSYYRGAQGII VYDVTRR+TFTNLS+VWAKE+DLYSTNQDCI
Sbjct: 62 KLTIWDTAGQERFRTLTSSYYRGAQGIIFVYDVTRRETFTNLSEVWAKEVDLYSTNQDCI 121
Query: 123 KLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
K+LVGNKVD+E+ERVV+KKEGI AR+ GCLF+ECSAKT VNV+ CFEELVLKILDTP+L
Sbjct: 122 KMLVGNKVDRETERVVSKKEGIALARQMGCLFLECSAKTHVNVENCFEELVLKILDTPNL 181
Query: 183 LAEGSKGLKKNIFKQKPPEADAAASGCC 210
L + + +KNIFKQ DA + CC
Sbjct: 182 LQDSATAARKNIFKQNQAN-DANSGSCC 208
>gi|18414255|ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana]
gi|297810433|ref|XP_002873100.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75098916|sp|O49841.1|RAC2A_ARATH RecName: Full=Ras-related protein RABC2a; Short=AtRABC2a; AltName:
Full=Ras-related protein Rab18B; Short=AtRab18B
gi|2723477|dbj|BAA24074.1| GTP-binding protein [Arabidopsis thaliana]
gi|7378638|emb|CAB83314.1| AtRab GTP-binding protein [Arabidopsis thaliana]
gi|26453054|dbj|BAC43603.1| putative AtRab GTP-binding protein [Arabidopsis thaliana]
gi|29824251|gb|AAP04086.1| unknown protein [Arabidopsis thaliana]
gi|297318937|gb|EFH49359.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332003236|gb|AED90619.1| RAB GTPase-C2A [Arabidopsis thaliana]
Length = 210
Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 144/207 (69%), Positives = 175/207 (84%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLK 63
SS+ Q +D FK+L+IGDSGVGKSSLL+SF S + E+L+PTIGVDFK+K + VGGK+LK
Sbjct: 3 SSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLK 62
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNL DVW KEI+LYSTNQ+C++
Sbjct: 63 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVR 122
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+LVGNKVD+ESER V+++EGI A+E C+F+ECSA+TR NV+QCFEEL LKI++ PSLL
Sbjct: 123 MLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLL 182
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
EGS +K+NI KQKP SGCC
Sbjct: 183 EEGSSAVKRNILKQKPEHQTNTQSGCC 209
>gi|224138818|ref|XP_002322909.1| predicted protein [Populus trichocarpa]
gi|222867539|gb|EEF04670.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 315 bits (806), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 149/210 (70%), Positives = 177/210 (84%), Gaps = 3/210 (1%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
M SSS S +D FK+L+IGDSGVGKSSLL+SF S + E+L+PTIGVDFK+K + VGGK
Sbjct: 1 MGSSSGS---YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGK 57
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYR AQGII+VYDVTRR+TFTNLSDVW KE++L+STNQD
Sbjct: 58 RLKLTIWDTAGQERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWGKEVELFSTNQD 117
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
C+K+LVGNKVDKES R VTK EG+ A+++GCLF+ECSAKTR NV+QCFEEL LKI++ P
Sbjct: 118 CVKMLVGNKVDKESGRDVTKDEGMALAKQHGCLFLECSAKTRENVEQCFEELALKIMEVP 177
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SLL EGS +K+NI KQKP A+ GCC
Sbjct: 178 SLLEEGSTAVKRNILKQKPEHHVASNGGCC 207
>gi|302782571|ref|XP_002973059.1| rab family GTPase [Selaginella moellendorffii]
gi|302805556|ref|XP_002984529.1| rab family GTPase [Selaginella moellendorffii]
gi|300147917|gb|EFJ14579.1| rab family GTPase [Selaginella moellendorffii]
gi|300159660|gb|EFJ26280.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/202 (72%), Positives = 174/202 (86%), Gaps = 1/202 (0%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
EFD+LFK+L+IGDSGVGKSSLLL FT+D F++LSPTIGVDFK+K + + GK+LKL IWD
Sbjct: 13 NEFDHLFKILLIGDSGVGKSSLLLRFTADTFDDLSPTIGVDFKLKLMTLEGKRLKLTIWD 72
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRTLTSSYYRGAQG+I+VYDVTRRDTFTNL DVW KE++LYSTNQDC+KLLVGN
Sbjct: 73 TAGQERFRTLTSSYYRGAQGVILVYDVTRRDTFTNLQDVWLKEVELYSTNQDCVKLLVGN 132
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
KVD++SER V++ EGI FAR+YGCLF+E SAKTR+NVQQCFEELV KIL+TPSL+AE +K
Sbjct: 133 KVDRDSERAVSQHEGIAFARKYGCLFLESSAKTRINVQQCFEELVRKILETPSLVAE-AK 191
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+KKNI + +G C
Sbjct: 192 SVKKNILRPGNEPPPPENAGSC 213
>gi|356533295|ref|XP_003535201.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 212
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 179/211 (84%), Gaps = 1/211 (0%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
M+SSS +D FK+L+IGDS VGKSSLL+SF S++ E+++PTIGVDFK+K + VGGK
Sbjct: 1 MNSSSGQSSGYDLSFKILLIGDSAVGKSSLLVSFISNSAEDIAPTIGVDFKIKMLTVGGK 60
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRRDTFTNLS+VW+KE++LYSTNQ+
Sbjct: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSEVWSKEVELYSTNQN 120
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
C+K+LVGNKVD++SERVV+K+EG+ A E GCLF ECSAKTR NV++CFEEL LKI++ P
Sbjct: 121 CVKMLVGNKVDRDSERVVSKEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVP 180
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAA-SGCC 210
SLL EGS +K+NI KQ+ + A+ GCC
Sbjct: 181 SLLEEGSTAVKRNILKQQQEQPQASEFGGCC 211
>gi|224069599|ref|XP_002326383.1| predicted protein [Populus trichocarpa]
gi|222833576|gb|EEE72053.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 142/201 (70%), Positives = 174/201 (86%), Gaps = 1/201 (0%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
+D FK+L+IGDSGVGKSSLL+SF S + E+++PTIGVDFK+K + VGGK+LKL IWDTA
Sbjct: 12 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDIAPTIGVDFKIKQLTVGGKRLKLTIWDTA 71
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRTLTSSYYR AQGII+VYDVTRR+TFTNLSDVW KE+DLYSTNQDC+K+LVGNKV
Sbjct: 72 GQERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWTKEVDLYSTNQDCVKMLVGNKV 131
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
DK+SER VT+ EG++ A+E+GC F+ECSAKTR NV+QCFEEL LKI++ PSL+ EGS +
Sbjct: 132 DKDSERDVTRDEGMSLAKEHGCTFLECSAKTRQNVEQCFEELALKIMEVPSLMEEGSTAV 191
Query: 191 KKNIFKQKPPE-ADAAASGCC 210
K+NI KQKP + ++ GCC
Sbjct: 192 KRNILKQKPDQHPPSSGGGCC 212
>gi|225441147|ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis vinifera]
gi|297739985|emb|CBI30167.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 143/200 (71%), Positives = 171/200 (85%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
+D FK+L+IGDS VGKSSLL+SF S + E+L+PTIGVDFK+K + VGGK+LKL IWDTA
Sbjct: 11 YDLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTA 70
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRTLTSSYYRGAQGII+VYDVTRR++FTNLSDVWAKE++LYSTNQDC+K+LVGNKV
Sbjct: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRESFTNLSDVWAKEVELYSTNQDCVKMLVGNKV 130
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D+ESERVV+++EGI A+E+GCLF ECSAKTR NV++CFEEL LKI++ PSLL EGS
Sbjct: 131 DRESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVPSLLEEGSTVG 190
Query: 191 KKNIFKQKPPEADAAASGCC 210
K+NI K KP GCC
Sbjct: 191 KRNILKPKPENQPPPTGGCC 210
>gi|168004225|ref|XP_001754812.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162693916|gb|EDQ80266.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 178/211 (84%), Gaps = 7/211 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKL 64
+AS EFD+LFK+L+IGDSGVGKSSLL+ FT+D F++LSPTIGVDFKVK + +GGKKLKL
Sbjct: 2 AASGGEFDHLFKILLIGDSGVGKSSLLVRFTADTFDDLSPTIGVDFKVKMMTLGGKKLKL 61
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQERFRTLTSSYYRGAQGII+VYDV+RR TFTNLSD+W KE+D YSTN DCIK+
Sbjct: 62 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVSRRATFTNLSDIWLKEVDRYSTNPDCIKM 121
Query: 125 LVGNKVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
L+GNKVD +E ERVVTKKEGI FAR++GCLF+E SAKT VNVQ+CF+ELV KILDTPSL
Sbjct: 122 LIGNKVDLEEHERVVTKKEGIAFARQHGCLFLEASAKTSVNVQRCFDELVQKILDTPSLT 181
Query: 184 AEGSKGLKKNIFKQKP----PEADA-AASGC 209
A+ ++ LKKN+ + P DA A GC
Sbjct: 182 ADTAQ-LKKNVLRPGETADLPAPDAGGACGC 211
>gi|1370172|emb|CAA98163.1| RAB1X [Lotus japonicus]
Length = 208
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 138/206 (66%), Positives = 172/206 (83%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKL 64
S+S +D FK+L+IGDSGVGKSSLL+SF S + E+ SPTIGVDFK+K + VGGK+LKL
Sbjct: 2 SSSSGGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDQSPTIGVDFKIKMLTVGGKRLKL 61
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
+WDTAGQERFRTLTSSYYRGAQGII+VYDVT+R+TFTNLS+VW+KE++LYS NQDC+K+
Sbjct: 62 TLWDTAGQERFRTLTSSYYRGAQGIILVYDVTKRETFTNLSEVWSKELELYSNNQDCVKM 121
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
LVGNKVD+++ R V+++EG+ A+E GCL IECSAKTR NV+QCFEEL LKI++ PSLL
Sbjct: 122 LVGNKVDRDAARAVSREEGLALAKELGCLLIECSAKTRENVEQCFEELALKIMEAPSLLE 181
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
EGS +K+NI KQK + GCC
Sbjct: 182 EGSTAVKRNILKQKQEPQASQHGGCC 207
>gi|356548355|ref|XP_003542568.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 211
Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 139/200 (69%), Positives = 171/200 (85%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
+D FK+L+IGDS VGKSSLL+SF S++ E+++PTIGVDFK+K + VGGK+LKL IWDTA
Sbjct: 11 YDLSFKILLIGDSAVGKSSLLVSFISNSAEDIAPTIGVDFKIKMLTVGGKRLKLTIWDTA 70
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRTLTSSYYRGAQGII+VYDVTRRDTFTNLS VW+KE++LYSTNQ+C+K+LVGNKV
Sbjct: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSLVWSKEVELYSTNQNCVKMLVGNKV 130
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D++SERVV+K+EG+ A E GCLF ECSAKTR NV++CFEEL LKI++ PSLL EGS +
Sbjct: 131 DRDSERVVSKEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVPSLLEEGSTAV 190
Query: 191 KKNIFKQKPPEADAAASGCC 210
K+NI KQ+ + GCC
Sbjct: 191 KRNILKQQQQPQASEFGGCC 210
>gi|449440149|ref|XP_004137847.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
gi|449501036|ref|XP_004161260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABC2a-like
[Cucumis sativus]
Length = 210
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 175/210 (83%), Gaps = 1/210 (0%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
M SSS +D FK+L+IGDSGVGKSSLLLSF S N + L+PTIGVDFK+K + VGGK
Sbjct: 1 MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNLSDVWAKE++LYSTN+D
Sbjct: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
C+K+L+GNKVD+ESER V+++EGI A+ G F+ECSAKTR NV++CFE+L LKI++ P
Sbjct: 121 CVKMLIGNKVDRESERAVSREEGIALAKVLGSYFLECSAKTRENVEKCFEDLALKIMEAP 180
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SL+ EGS +K+NI KQ+ + A+ + CC
Sbjct: 181 SLIEEGSTVVKRNILKQQEFQP-ASTTSCC 209
>gi|413920113|gb|AFW60045.1| hypothetical protein ZEAMMB73_972006 [Zea mays]
Length = 157
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 140/156 (89%), Positives = 149/156 (95%)
Query: 55 VDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDL 114
V +GGKKLKLAIWDTAGQERFRTLTSSYYRGAQG+IMVYDVTRR+TFTNLSD+WAKEIDL
Sbjct: 2 VTIGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDL 61
Query: 115 YSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVL 174
YSTNQDCIK+LVGNKVDKESER VTKKEGI FAREYGCLF+ECSAKT+VNV+QCFEELVL
Sbjct: 62 YSTNQDCIKMLVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVL 121
Query: 175 KILDTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
KILDTPSLLA+ S G KKNIFKQKPPEADAAAS CC
Sbjct: 122 KILDTPSLLADASSGAKKNIFKQKPPEADAAASSCC 157
>gi|255645626|gb|ACU23307.1| unknown [Glycine max]
Length = 211
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 139/200 (69%), Positives = 170/200 (85%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
+D FK+L+IGDS VGKSSLL+SF S++ E ++PTIGVDFK+K + VGGK+LKL IWDTA
Sbjct: 11 YDLSFKILLIGDSAVGKSSLLVSFISNSAEGIAPTIGVDFKIKMLTVGGKRLKLTIWDTA 70
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRTLTSSYYRGAQGII+VYDVTRRDTFTNLS VW+KE++LYSTNQ+C+K+LVGNKV
Sbjct: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSLVWSKEVELYSTNQNCVKMLVGNKV 130
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D++SERVV+K+EG+ A E GCLF ECSAKTR NV++CFEEL LKI++ PSLL EGS +
Sbjct: 131 DRDSERVVSKEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVPSLLEEGSTAV 190
Query: 191 KKNIFKQKPPEADAAASGCC 210
K+NI KQ+ + GCC
Sbjct: 191 KRNILKQQQQPQASEFGGCC 210
>gi|388503938|gb|AFK40035.1| unknown [Medicago truncatula]
Length = 214
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 137/201 (68%), Positives = 171/201 (85%), Gaps = 1/201 (0%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDN-FEELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
D FK+L+IGDSGVGKS LL++F S++ E+LSPTIGVDFK+K + VGGK+LKL IWDT
Sbjct: 13 HDLSFKILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGGKRLKLTIWDT 72
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNLS+VW+KE++LYSTNQ+C+K+LVGNK
Sbjct: 73 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQECVKMLVGNK 132
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
VDK+SER V+++EG++ A+E GCL +ECSAKTR NV++CFEEL LKI++ PSLL EGS
Sbjct: 133 VDKDSERAVSREEGLSLAKELGCLLLECSAKTRENVEKCFEELALKIMEAPSLLEEGSAA 192
Query: 190 LKKNIFKQKPPEADAAASGCC 210
K+N+ KQK + GCC
Sbjct: 193 TKRNVLKQKQEPQSSQNGGCC 213
>gi|356505277|ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 211
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 135/200 (67%), Positives = 169/200 (84%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
+D FK+L+IGDSGVGKSSLL+SF S + E+LSPTIGVDFK+K + VGGK+LKL IWDTA
Sbjct: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLSPTIGVDFKIKTLTVGGKRLKLTIWDTA 70
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRTL SSYYR AQGII+VYDVTRR+TFTNLS+VW+KE++LYSTNQDC+K+LVGNKV
Sbjct: 71 GQERFRTLNSSYYRKAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCVKILVGNKV 130
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D+++ER V+++EG+ A+E GCL +ECSAKTR NV+QCFEEL LKI++ PSLL EGS +
Sbjct: 131 DRDTERAVSREEGLALAKELGCLLLECSAKTRENVEQCFEELALKIMEAPSLLEEGSTAV 190
Query: 191 KKNIFKQKPPEADAAASGCC 210
K+++ K K + GCC
Sbjct: 191 KRSVLKPKQESQASQNGGCC 210
>gi|168019492|ref|XP_001762278.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162686356|gb|EDQ72745.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 175/211 (82%), Gaps = 7/211 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKL 64
+AS EFD+LFK+L+IGDSGVGKSSLLL FT+D F++LSPTIGVDFKVK + +GGK+LKL
Sbjct: 2 AASGGEFDHLFKVLLIGDSGVGKSSLLLRFTADTFDDLSPTIGVDFKVKMMTLGGKRLKL 61
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQERFRTLTSSYYRGAQGII+VYDV+RR TFT+LSD+W KE+D +ST DCIK+
Sbjct: 62 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVSRRATFTDLSDIWLKEVDRFSTKPDCIKM 121
Query: 125 LVGNKVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
L+GNKVD +E ERVVTKKEGI FAR++GCLF+E SAKT +NVQ+CF+ELV KILDTPSL+
Sbjct: 122 LIGNKVDLEERERVVTKKEGIAFARQHGCLFLEASAKTSINVQRCFDELVQKILDTPSLI 181
Query: 184 AEGSKGLKKNIFKQK-----PPEADAAASGC 209
++ LKKN+ + P A A GC
Sbjct: 182 DNVAQ-LKKNVLRPGETADLPSPAAGGACGC 211
>gi|255556838|ref|XP_002519452.1| protein with unknown function [Ricinus communis]
gi|223541315|gb|EEF42866.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/205 (67%), Positives = 170/205 (82%), Gaps = 7/205 (3%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
+D FK+L+IGDSGVGKSSLL+SF S + E+L+PTIGVDFK+K + V GK+LKL IWDTA
Sbjct: 13 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVDGKRLKLTIWDTA 72
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRTLTSSYYR AQGII+VYDVTRR+TFTNLSDVWAKE+DLY TN+DC+K+LVGNK+
Sbjct: 73 GQERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWAKEVDLYCTNKDCVKMLVGNKL 132
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D +SER V+++EG+ A+E+GC F+ECSAKTR NV++CFEEL LKI++ PSLL EGS +
Sbjct: 133 DIDSERAVSREEGMALAKEHGCAFLECSAKTRENVEKCFEELALKIMEVPSLLEEGSTAV 192
Query: 191 KKNIFKQK-----PPEADAAASGCC 210
KK I QK PP A +GCC
Sbjct: 193 KKKILNQKQENQAPP--SRANTGCC 215
>gi|242034275|ref|XP_002464532.1| hypothetical protein SORBIDRAFT_01g020220 [Sorghum bicolor]
gi|241918386|gb|EER91530.1| hypothetical protein SORBIDRAFT_01g020220 [Sorghum bicolor]
Length = 217
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/199 (69%), Positives = 169/199 (84%), Gaps = 3/199 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSF-TSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
FK+L+IGDSGVGKSSLL+SF + N + +++PTIGVDFK+K++ VGGKKLKL IWDTAGQ
Sbjct: 18 FKILLIGDSGVGKSSLLVSFVAASNLDADIAPTIGVDFKIKFLTVGGKKLKLTIWDTAGQ 77
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRT+TSSYYRGAQGII+VYDVT+R++F+NLSDVW KEI+ STN+DCIK+LVGNKVDK
Sbjct: 78 ERFRTITSSYYRGAQGIILVYDVTKRESFSNLSDVWTKEIEANSTNKDCIKMLVGNKVDK 137
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG-LK 191
+ ER+VTK+EG+ FA E GCLF+E SAKTR NV+QCFEEL LKIL+ PSLL EGS +K
Sbjct: 138 DDERMVTKEEGLAFAEESGCLFLESSAKTRENVEQCFEELALKILEVPSLLEEGSSSVVK 197
Query: 192 KNIFKQKPPEADAAASGCC 210
+NI KQK +SGCC
Sbjct: 198 RNILKQKQESHAKNSSGCC 216
>gi|115450707|ref|NP_001048954.1| Os03g0146000 [Oryza sativa Japonica Group]
gi|15451614|gb|AAK98738.1|AC090485_17 Putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108706165|gb|ABF93960.1| Ras family protein, expressed [Oryza sativa Japonica Group]
gi|113547425|dbj|BAF10868.1| Os03g0146000 [Oryza sativa Japonica Group]
gi|125542397|gb|EAY88536.1| hypothetical protein OsI_10009 [Oryza sativa Indica Group]
gi|125584909|gb|EAZ25573.1| hypothetical protein OsJ_09398 [Oryza sativa Japonica Group]
gi|215692396|dbj|BAG87816.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 210
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 174/212 (82%), Gaps = 5/212 (2%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF--EELSPTIGVDFKVKYVDVG 58
M SS AS +D FK+L+IGDS VGKSSLL+SF S + +E++PTIGVDFK+K++ V
Sbjct: 1 MASSPASS--YDCSFKILLIGDSAVGKSSLLVSFVSASHIDDEIAPTIGVDFKIKFLTVN 58
Query: 59 GKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTN 118
GKKLKL IWDTAGQERFR +TSSYYRGA GII+VYDVT+R++FTNL+DVWAKEI+L+STN
Sbjct: 59 GKKLKLTIWDTAGQERFRGITSSYYRGAHGIILVYDVTKRESFTNLADVWAKEIELHSTN 118
Query: 119 QDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
++CIK+LVGNKVDK ER+VT++EG+ FA+E GCLF+E SAKTR NV++CFEEL LKIL+
Sbjct: 119 KECIKMLVGNKVDKNEERMVTREEGLAFAQESGCLFLESSAKTRENVEKCFEELALKILE 178
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
PSLL EGS +K+N KQK E A GCC
Sbjct: 179 VPSLLEEGSSVVKRNSLKQK-HENKAKNGGCC 209
>gi|168025036|ref|XP_001765041.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162683850|gb|EDQ70257.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 208
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 138/197 (70%), Positives = 170/197 (86%), Gaps = 2/197 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKL 64
+ S+ EFD+LFK+L+IGDSGVGKSSLLL FT+D F++LSPTIGVDFKV+ + +G K+LKL
Sbjct: 2 AGSRGEFDHLFKVLLIGDSGVGKSSLLLRFTADKFDDLSPTIGVDFKVEMMILGTKRLKL 61
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQERFRTLTSSYYRGA GII+VYDV+RR TFT+ SDVW KE++ +STN+DCIK+
Sbjct: 62 TIWDTAGQERFRTLTSSYYRGAHGIILVYDVSRRTTFTDFSDVWLKEVEWFSTNKDCIKV 121
Query: 125 LVGNKVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LVGNKVD +E ERVV KKEG+ FAR++GCLF+E SAKT VNVQ+CF+ELV KILDTPSL
Sbjct: 122 LVGNKVDLEERERVVAKKEGVAFARQHGCLFLEASAKTCVNVQRCFDELVQKILDTPSLH 181
Query: 184 AEGSKGLKKNIFKQKPP 200
A ++ L+KN+ + PP
Sbjct: 182 ANTAQ-LRKNVIYKCPP 197
>gi|226502426|ref|NP_001150036.1| ras-related protein Rab-18 [Zea mays]
gi|226958554|ref|NP_001152900.1| uncharacterized protein LOC100272640 [Zea mays]
gi|194700036|gb|ACF84102.1| unknown [Zea mays]
gi|195636232|gb|ACG37584.1| ras-related protein Rab-18 [Zea mays]
gi|413934110|gb|AFW68661.1| Ras protein Rab-18 [Zea mays]
Length = 215
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 137/199 (68%), Positives = 168/199 (84%), Gaps = 3/199 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF--EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
FK L+IGDSGVGKSSLL+SF + ++ +++PTIGVDFK+K++ VGGKKLKL IWDTAGQ
Sbjct: 16 FKFLLIGDSGVGKSSLLVSFVAASYLDGDIAPTIGVDFKIKFLTVGGKKLKLTIWDTAGQ 75
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRT+TSSYYRGAQGII+VYDVT+R++F+NL+DVW KEI+ STN+DCIK+LVGNKVDK
Sbjct: 76 ERFRTITSSYYRGAQGIILVYDVTKRESFSNLADVWTKEIEANSTNKDCIKMLVGNKVDK 135
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG-LK 191
+ ER+VTK+EG+ FA EYGCLF+E SAKTR NV++CFEEL LKIL+ PSLL EGS +K
Sbjct: 136 DDERMVTKEEGLAFAEEYGCLFLESSAKTRENVEKCFEELALKILEVPSLLEEGSSSVVK 195
Query: 192 KNIFKQKPPEADAAASGCC 210
+NI KQK SGCC
Sbjct: 196 RNILKQKQESDAKNGSGCC 214
>gi|116786676|gb|ABK24198.1| unknown [Picea sitchensis]
Length = 222
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 168/209 (80%), Gaps = 3/209 (1%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLK 63
SS SQ +FDY FKLL+ GDSGVGKSSLLL FTSD+F++ TIGVDFK K + VG K+LK
Sbjct: 15 SSRSQGDFDYSFKLLLAGDSGVGKSSLLLRFTSDSFDDAIATIGVDFKQKLMTVGDKRLK 74
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQE+FRTLT+SYYRGA G I VYDVTRR+TFTNL +VW +E +YSTNQDCIK
Sbjct: 75 LTIWDTAGQEKFRTLTNSYYRGAHGFIFVYDVTRRETFTNLKNVWLEEALIYSTNQDCIK 134
Query: 124 LLVGNKVDK--ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 181
++VGNKVD+ +SE VV+K+EGI FA+++GCLFIECSAKTR+NV+QCFEEL+LKILDTPS
Sbjct: 135 MVVGNKVDRAMDSESVVSKEEGIEFAKQHGCLFIECSAKTRLNVEQCFEELLLKILDTPS 194
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
LL S K NIF + P A CC
Sbjct: 195 LLEGSSSVEKNNIFDYEQPTL-GANDPCC 222
>gi|168006773|ref|XP_001756083.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692593|gb|EDQ78949.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/205 (67%), Positives = 172/205 (83%), Gaps = 4/205 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
+FD+LFK+L++G+SGVGKSSLLL FT+ F++LSPTIGVDFKVK V + GK+LKL IWD
Sbjct: 6 NDFDHLFKILLVGNSGVGKSSLLLRFTASKFDDLSPTIGVDFKVKMVSLQGKRLKLTIWD 65
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRTLTS+YYRGAQGII+VYDVTRR TFT+LSDVW KE+D +STN+DCIK+L+GN
Sbjct: 66 TAGQERFRTLTSTYYRGAQGIILVYDVTRRATFTDLSDVWLKEVDRFSTNKDCIKMLIGN 125
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
KVD +ESERVV KKEGI FAR++GCLF+E SAKT +NVQ+CF+ELV KILDTPSL A+ +
Sbjct: 126 KVDLEESERVVAKKEGIAFARQHGCLFLEASAKTSINVQRCFDELVHKILDTPSLTADTA 185
Query: 188 KGLKKNIFK--QKPPEADAAASGCC 210
+ L+ N+ + Q + A G C
Sbjct: 186 Q-LETNLLRSDQMWDQGYLALGGVC 209
>gi|242042233|ref|XP_002468511.1| hypothetical protein SORBIDRAFT_01g047150 [Sorghum bicolor]
gi|241922365|gb|EER95509.1| hypothetical protein SORBIDRAFT_01g047150 [Sorghum bicolor]
Length = 210
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/212 (64%), Positives = 176/212 (83%), Gaps = 5/212 (2%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF--EELSPTIGVDFKVKYVDVG 58
M SS AS +D FK+L+IGDS VGKSSLL+SF S ++++PTIGVDFK+K++ VG
Sbjct: 1 MASSPASS--YDCSFKVLLIGDSAVGKSSLLVSFVSAAHIDDDIAPTIGVDFKIKFLSVG 58
Query: 59 GKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTN 118
GKKLKL IWDTAGQERFRT+TSSYYRGA GII+VYDVT+R++FTNL++VW KEI+L+STN
Sbjct: 59 GKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRESFTNLAEVWTKEIELHSTN 118
Query: 119 QDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
++C+K+LVGNKVDK+ +R+VTK+EG+ FA+E GCLF+E SAKTR NV++CFEEL LKIL+
Sbjct: 119 KECVKMLVGNKVDKDEDRMVTKEEGLAFAQECGCLFVESSAKTRENVEKCFEELALKILE 178
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
PSLL EGS +K+N KQK ++ + GCC
Sbjct: 179 VPSLLEEGSSVVKRNTLKQKQENSNQSG-GCC 209
>gi|226529379|ref|NP_001150695.1| ras-related protein Rab-18 [Zea mays]
gi|195641120|gb|ACG40028.1| ras-related protein Rab-18 [Zea mays]
Length = 212
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 173/212 (81%), Gaps = 4/212 (1%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF--EELSPTIGVDFKVKYVDVG 58
M SS AS +D FK+L+IGDS VGKSSLL+SF S ++++PTIGVDFK+K++ VG
Sbjct: 1 MASSPASS--YDCSFKVLLIGDSAVGKSSLLVSFVSAAHIDDDIAPTIGVDFKIKFLSVG 58
Query: 59 GKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTN 118
GKKLKL IWDTAGQERFRT+TSSYYRGA GII+VYDVT+R++FTNL+DVW KEI+L+STN
Sbjct: 59 GKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRESFTNLADVWTKEIELHSTN 118
Query: 119 QDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
++CIK+LVGNKVDK+ +R+VTK+EG+ FA+E GCLF+E SAKTR NV++CFEEL LKIL
Sbjct: 119 KECIKMLVGNKVDKDEDRMVTKEEGLEFAQERGCLFVESSAKTRENVEKCFEELALKILQ 178
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
PSLL EGS +K+N K + +A SG C
Sbjct: 179 VPSLLEEGSSVVKRNTLTLKQKQENANRSGGC 210
>gi|223947433|gb|ACN27800.1| unknown [Zea mays]
gi|413957007|gb|AFW89656.1| hypothetical protein ZEAMMB73_805451 [Zea mays]
Length = 309
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 137/212 (64%), Positives = 172/212 (81%), Gaps = 4/212 (1%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF--EELSPTIGVDFKVKYVDVG 58
M SS AS +D FK+L+IGDS VGKSSLL+SF S ++++PTIGVDFK+ ++ VG
Sbjct: 98 MASSPASS--YDCSFKVLLIGDSAVGKSSLLVSFVSAAHIDDDIAPTIGVDFKINFLSVG 155
Query: 59 GKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTN 118
GKKLKL IWDTAGQERFRT+TSSYYRGA GII+VYDVT+R++FTNL+DVW KEI+L+STN
Sbjct: 156 GKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRESFTNLADVWTKEIELHSTN 215
Query: 119 QDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
++CIK+LVGNKVDK+ +R+VTK+EG+ FA+E GCLF+E SAKTR NV++CFEEL LKIL
Sbjct: 216 KECIKMLVGNKVDKDEDRMVTKEEGLAFAQERGCLFVESSAKTRENVEKCFEELALKILQ 275
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
PSLL EGS +K+N K + +A SG C
Sbjct: 276 VPSLLEEGSSVVKRNTLTLKQKQENANRSGGC 307
>gi|226506700|ref|NP_001152280.1| ras-related protein Rab-18 [Zea mays]
gi|195654619|gb|ACG46777.1| ras-related protein Rab-18 [Zea mays]
gi|414871235|tpg|DAA49792.1| TPA: ras protein Rab-18 [Zea mays]
Length = 215
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 135/199 (67%), Positives = 167/199 (83%), Gaps = 3/199 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF--EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
FK+L+IGDSGVGKSSLL+SF + + +++PTIGVDFK+K++ VGGKKLKL IWDTAGQ
Sbjct: 16 FKILLIGDSGVGKSSLLVSFVAASHLDGDIAPTIGVDFKIKFLTVGGKKLKLTIWDTAGQ 75
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRT+TSSYYRGAQGII+VYDVT+R++F+NL+DVW KEI+ STN+DCIK+LVGNKVDK
Sbjct: 76 ERFRTITSSYYRGAQGIILVYDVTKRESFSNLADVWTKEIEANSTNKDCIKMLVGNKVDK 135
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG-LK 191
+ ER+VT++EG+ FA E GCLF+E SAKTR NV++CFEEL LKIL+ PSLL EGS +K
Sbjct: 136 DDERMVTEEEGLAFAEESGCLFLESSAKTRENVEKCFEELALKILEVPSLLEEGSSSVVK 195
Query: 192 KNIFKQKPPEADAAASGCC 210
+NI KQK SGCC
Sbjct: 196 RNILKQKQESHAKNGSGCC 214
>gi|357114065|ref|XP_003558821.1| PREDICTED: ras-related protein RABC2a-like [Brachypodium
distachyon]
Length = 212
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/209 (64%), Positives = 168/209 (80%), Gaps = 2/209 (0%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF--EELSPTIGVDFKVKYVDVGGKK 61
+S +D FK+L+IGDS VGKSSLL+SF S + ++SPTIGVDFK+K++ VG KK
Sbjct: 3 TSPGTSSYDCSFKILLIGDSAVGKSSLLVSFVSASPTDHDISPTIGVDFKIKFLTVGEKK 62
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
LKL IWDTAGQERFRT+TSSYYRGA GII+VYDVT+R +FTNL+DVWAKEI+L+STN++C
Sbjct: 63 LKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKEC 122
Query: 122 IKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 181
+K+LVGNKVDK+ ER+VT++EG+ FA+E GCLF+E SAKTR NV++CFEEL LKIL+ PS
Sbjct: 123 VKMLVGNKVDKDEERMVTREEGLAFAQECGCLFLESSAKTRENVEKCFEELALKILEVPS 182
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
L EGS +K+N KQK GCC
Sbjct: 183 LSEEGSSVVKRNSLKQKQENNAKHGGGCC 211
>gi|115482326|ref|NP_001064756.1| Os10g0456600 [Oryza sativa Japonica Group]
gi|31432458|gb|AAP54088.1| Ras-related protein Rab-18, putative, expressed [Oryza sativa
Japonica Group]
gi|113639365|dbj|BAF26670.1| Os10g0456600 [Oryza sativa Japonica Group]
gi|125532213|gb|EAY78778.1| hypothetical protein OsI_33880 [Oryza sativa Indica Group]
gi|125575025|gb|EAZ16309.1| hypothetical protein OsJ_31770 [Oryza sativa Japonica Group]
gi|215736815|dbj|BAG95744.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 222
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/202 (65%), Positives = 166/202 (82%), Gaps = 6/202 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF-----EELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
FK+L+IGDSGVGKSSLL+SF ++++PTIGVDFK+K++ +GGKKLKL IWDT
Sbjct: 20 FKILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFKIKFLTIGGKKLKLTIWDT 79
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+TSSYYRGAQGII+VYDVT+R++FTNL++VW+KEI+ +S+N+DCIK+LVGNK
Sbjct: 80 AGQERFRTITSSYYRGAQGIILVYDVTKRESFTNLAEVWSKEIESHSSNKDCIKMLVGNK 139
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
+DKE ER VT++EG+ FA E GCLF+E SAKTR NV++CFEEL LKI+D PSLL EGS
Sbjct: 140 IDKEDERTVTREEGLAFAEESGCLFLESSAKTRDNVEKCFEELALKIMDVPSLLEEGSSS 199
Query: 190 -LKKNIFKQKPPEADAAASGCC 210
+K+NI KQK GCC
Sbjct: 200 VVKRNILKQKQESQAKHGGGCC 221
>gi|195628816|gb|ACG36230.1| ras-related protein Rab-18 [Zea mays]
Length = 215
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/199 (67%), Positives = 166/199 (83%), Gaps = 3/199 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF--EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
FK+L+IGDSGVGKSSLL+SF + + +++PTIGVDFK+K++ VGGKKLKL IWDTAGQ
Sbjct: 16 FKILLIGDSGVGKSSLLVSFVAASHLDGDIAPTIGVDFKIKFLTVGGKKLKLTIWDTAGQ 75
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRT+TSSYYRGAQGII+VYDVT+R++F+NL+DVW KEI+ STN+DCIK+LVGNKVDK
Sbjct: 76 ERFRTITSSYYRGAQGIILVYDVTKRESFSNLADVWTKEIEANSTNKDCIKMLVGNKVDK 135
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG-LK 191
+ ER+VT++EG+ FA E GCLF+E SAKTR NV++CFEEL LKIL+ PSLL EGS +K
Sbjct: 136 DDERMVTEEEGLAFAEESGCLFLESSAKTRENVEKCFEELALKILEVPSLLEEGSSSVVK 195
Query: 192 KNIFKQKPPEADAAASGCC 210
+ I KQK SGCC
Sbjct: 196 RKILKQKQESHAKNGSGCC 214
>gi|356576370|ref|XP_003556305.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 212
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 135/209 (64%), Positives = 162/209 (77%), Gaps = 4/209 (1%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSF--TSDNFEELSPTIGVDFKVKYVDVGGKK 61
S +DY FK+L++GDSGVGKSSLLLSF S++ LSPTIGVDFK+K VGGK+
Sbjct: 5 SRVGSSNYDYSFKVLLVGDSGVGKSSLLLSFISNSNSINHLSPTIGVDFKIKLFTVGGKR 64
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
LKL IWDTAGQERF T+ SYYRGA GII+VYDVTRR+TFTNL D+WAKE++LYSTN D
Sbjct: 65 LKLTIWDTAGQERFGTVIGSYYRGAHGIILVYDVTRRETFTNLIDIWAKEVELYSTNHDS 124
Query: 122 IKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 181
IK+LVGNKVDKESER V+K+EG+ A+++ CLF+ECSAKTR NVQQCF +L LKILD PS
Sbjct: 125 IKILVGNKVDKESERAVSKEEGMALAQQHRCLFLECSAKTRENVQQCFNDLTLKILDVPS 184
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
L GS +K+ KQK + + GCC
Sbjct: 185 LRERGSVAVKRQ--KQKHIYETSKSGGCC 211
>gi|168018849|ref|XP_001761958.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162687013|gb|EDQ73399.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 213
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 137/204 (67%), Positives = 168/204 (82%), Gaps = 3/204 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+FD LFK+L+IG+SGVGKSSLLL FT+ F++LSPTIGVDFKVK +++ GK+LKL IWDT
Sbjct: 8 DFDNLFKILLIGNSGVGKSSLLLRFTAGKFDDLSPTIGVDFKVKMLNLQGKRLKLTIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRTLTSSYYRGAQGII+VYDVTRR TFT+LSDVW KE+D YSTN+DCI +LVG+K
Sbjct: 68 AGQERFRTLTSSYYRGAQGIILVYDVTRRATFTDLSDVWLKEVDRYSTNKDCIMMLVGSK 127
Query: 130 VD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
VD +ES RVVTKKEGI FAR++GCLF+E SAKT +NVQ+CF+ELV KI+DTPSL A+ K
Sbjct: 128 VDLEESGRVVTKKEGIAFARQHGCLFLEASAKTSINVQRCFDELVHKIIDTPSLTADTGK 187
Query: 189 GLKKNIFK--QKPPEADAAASGCC 210
N+ + + + + G C
Sbjct: 188 LKPTNLLRPDKASDQGTSTPGGIC 211
>gi|351723071|ref|NP_001236498.1| uncharacterized protein LOC100527726 [Glycine max]
gi|255633056|gb|ACU16883.1| unknown [Glycine max]
Length = 194
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 128/181 (70%), Positives = 159/181 (87%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
+D FK+L+IGDSGVGKSSLL+SF S + E+LSPTIGVDFK+K + VGGK+LKL IWDTA
Sbjct: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLSPTIGVDFKIKTLTVGGKRLKLTIWDTA 70
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRTL SSYYR AQGII+VYDVTRR+TFTNLS+VW+KE++LYSTNQDC+K+LVGNKV
Sbjct: 71 GQERFRTLNSSYYRKAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCVKILVGNKV 130
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D+++ER V+++EG+ A++ GCL +ECSAKTR NV+QCFEEL LKI++ PSLL E + L
Sbjct: 131 DRDTERAVSREEGLALAKDLGCLLLECSAKTRENVEQCFEELALKIMEAPSLLEEDQQQL 190
Query: 191 K 191
K
Sbjct: 191 K 191
>gi|224113131|ref|XP_002316401.1| predicted protein [Populus trichocarpa]
gi|118482557|gb|ABK93199.1| unknown [Populus trichocarpa]
gi|222865441|gb|EEF02572.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 165/207 (79%), Gaps = 1/207 (0%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLK 63
S +DY FK+L+IGDSGVGKSSLLLSF S++ +LSPTIGVDFK+K + +GGK+LK
Sbjct: 6 SKGWNNSYDYSFKILLIGDSGVGKSSLLLSFISNSVRDLSPTIGVDFKIKVLTLGGKRLK 65
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TF NLSD+WA+E++LY TNQ CIK
Sbjct: 66 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFENLSDIWAEEVELY-TNQKCIK 124
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+LVGNKVD++SERVV+++EG+ A+E+ C F+ECSAKTR NV QCF+EL LKI + PSLL
Sbjct: 125 ILVGNKVDRDSERVVSREEGMALAQEHKCSFLECSAKTRENVLQCFKELTLKISEVPSLL 184
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
GS +++ I K+K GCC
Sbjct: 185 ENGSVVVRQQILKEKQVYQAPRGGGCC 211
>gi|359486861|ref|XP_002265762.2| PREDICTED: ras-related protein RABC2a-like [Vitis vinifera]
Length = 215
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 167/211 (79%), Gaps = 2/211 (0%)
Query: 1 MDSSSASQ--QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVG 58
M SSS + +D FK+L+IGDSGVGKSSLLLSF S + +LSPTIGVDFK+ + +G
Sbjct: 4 MGSSSLGRGKNSYDCSFKILLIGDSGVGKSSLLLSFISGSVHDLSPTIGVDFKIMLLTIG 63
Query: 59 GKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTN 118
GK+LKL IWDTAGQERF TLT+SYYRGA GII+VYDVTRR++FTNL DVWAKE++LYSTN
Sbjct: 64 GKRLKLTIWDTAGQERFGTLTNSYYRGAHGIILVYDVTRRESFTNLLDVWAKEVELYSTN 123
Query: 119 QDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
+CIK LVGNKVD++ ER VT++EG++ A+E+ C F+ECSAKTR NVQQCF+EL LKIL
Sbjct: 124 HECIKFLVGNKVDRDCERAVTREEGMSLAQEHKCSFLECSAKTRENVQQCFKELTLKILQ 183
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEADAAASGC 209
PSLL +GS+ +++ QK ++ S C
Sbjct: 184 VPSLLEQGSRVVERQTLMQKELYQESPRSCC 214
>gi|296085951|emb|CBI31392.3| unnamed protein product [Vitis vinifera]
Length = 212
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 167/211 (79%), Gaps = 2/211 (0%)
Query: 1 MDSSSASQ--QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVG 58
M SSS + +D FK+L+IGDSGVGKSSLLLSF S + +LSPTIGVDFK+ + +G
Sbjct: 1 MGSSSLGRGKNSYDCSFKILLIGDSGVGKSSLLLSFISGSVHDLSPTIGVDFKIMLLTIG 60
Query: 59 GKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTN 118
GK+LKL IWDTAGQERF TLT+SYYRGA GII+VYDVTRR++FTNL DVWAKE++LYSTN
Sbjct: 61 GKRLKLTIWDTAGQERFGTLTNSYYRGAHGIILVYDVTRRESFTNLLDVWAKEVELYSTN 120
Query: 119 QDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
+CIK LVGNKVD++ ER VT++EG++ A+E+ C F+ECSAKTR NVQQCF+EL LKIL
Sbjct: 121 HECIKFLVGNKVDRDCERAVTREEGMSLAQEHKCSFLECSAKTRENVQQCFKELTLKILQ 180
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEADAAASGC 209
PSLL +GS+ +++ QK ++ S C
Sbjct: 181 VPSLLEQGSRVVERQTLMQKELYQESPRSCC 211
>gi|449441211|ref|XP_004138376.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
gi|449503760|ref|XP_004162163.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
Length = 208
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/196 (65%), Positives = 159/196 (81%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQER 74
FK+L+IGDS VGKSSLL +F S + +LSPTIGVDFK+K + V GK+LKL IWDTAGQER
Sbjct: 12 FKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKRLKLTIWDTAGQER 71
Query: 75 FRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKES 134
FR+LTSSYYRGAQGII+VYDVTRR+TF NL DVWA E++LY T+QDC+K+LVGNKVD+ES
Sbjct: 72 FRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVKMLVGNKVDRES 131
Query: 135 ERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKNI 194
ERVV++++GI A + G LF ECSAKTR NV++CFEEL +KI++ PS L E S +K+NI
Sbjct: 132 ERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFLEERSSLVKRNI 191
Query: 195 FKQKPPEADAAASGCC 210
+QK + GCC
Sbjct: 192 LRQKQEGQAQQSGGCC 207
>gi|356535505|ref|XP_003536285.1| PREDICTED: ras-related protein RABC2a [Glycine max]
gi|255629553|gb|ACU15124.1| unknown [Glycine max]
Length = 212
Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 164/210 (78%), Gaps = 4/210 (1%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSF--TSDNFEELSPTIGVDFKVKYVDVGGK 60
+S +DY FK+L+IGDSGVGKSSLLLSF S++ +LSPTIGVDFK+K VGGK
Sbjct: 4 ASRVESSNYDYSFKVLLIGDSGVGKSSLLLSFISNSNSINDLSPTIGVDFKIKLFTVGGK 63
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
+LKL IWDTAGQERF T+ SSYYRGA GII+VYDVTRR+TFTNL D+WAKE++ YSTN
Sbjct: 64 RLKLTIWDTAGQERFGTVISSYYRGAHGIILVYDVTRRETFTNLIDIWAKEVERYSTNHG 123
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
IK+LVGNKVDK+SER V+K+EG+ A+++ CLF+ECSAKTR NVQQCF +L LKILD P
Sbjct: 124 SIKILVGNKVDKDSERAVSKEEGMALAQQHRCLFLECSAKTRENVQQCFNDLTLKILDVP 183
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
L +GS +K+ KQK + ++GCC
Sbjct: 184 GLREKGSVAVKRQ--KQKHIYETSQSAGCC 211
>gi|168061333|ref|XP_001782644.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665877|gb|EDQ52547.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 131/191 (68%), Positives = 164/191 (85%), Gaps = 2/191 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+FD L K+ ++G+SGVGKSSLLL F + F+EL PTIGVDFKVK +++ GK+LKL IWDT
Sbjct: 7 DFDILLKIPVVGNSGVGKSSLLLRFAAGKFDELWPTIGVDFKVKMMNLQGKRLKLTIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRTLTS+YYRGAQGII+VYDVTRR TFT+L++VW KE++ +STN+DCIK+L+GNK
Sbjct: 67 AGQERFRTLTSTYYRGAQGIILVYDVTRRATFTDLTNVWLKEVERFSTNKDCIKMLIGNK 126
Query: 130 VD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
VD +ESER+VTKKE I FA+++GCLF+E SAKT +NVQ+CF ELVLKILDTP+L A+ S
Sbjct: 127 VDLEESERMVTKKEAIAFAKQHGCLFLEASAKTSINVQRCFNELVLKILDTPNLTAD-SV 185
Query: 189 GLKKNIFKQKP 199
LK N+FK P
Sbjct: 186 QLKPNLFKPNP 196
>gi|326515390|dbj|BAK03608.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 207
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/208 (63%), Positives = 169/208 (81%), Gaps = 6/208 (2%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTS--DNFEELSPTIGVDFKVKYVDVGGKKL 62
S +D FK+L+IGDS VGKSSLL+SF S +++SPTIGVDFK+K++ VG KKL
Sbjct: 3 STPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKL 62
Query: 63 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCI 122
KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT+R +FTNL+DVWAKEI+L+STN++C+
Sbjct: 63 KLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECV 122
Query: 123 KLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
K+LVGNK+DK+ +R+VT +EG+ FA++ GCLF+E SAKTR NV++CFEELVLKIL+ PSL
Sbjct: 123 KMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESSAKTRENVEKCFEELVLKILEVPSL 182
Query: 183 LAEGSKGLKKNIFKQKPPEADAAASGCC 210
EGS +K+N KQK + + GCC
Sbjct: 183 SEEGSSVVKRNSLKQKHEK----SGGCC 206
>gi|217069806|gb|ACJ83263.1| unknown [Medicago truncatula]
gi|388498948|gb|AFK37540.1| unknown [Medicago truncatula]
Length = 212
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 163/210 (77%), Gaps = 4/210 (1%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSD--NFEELSPTIGVDFKVKYVDVGGK 60
SS +DY FK+L+IGDSGVGKSSLLLSF S+ + ++LSPTIGVDFK+K +G K
Sbjct: 4 SSKVGNSNYDYSFKVLLIGDSGVGKSSLLLSFISNANSLDDLSPTIGVDFKIKLFTIGDK 63
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
+LKL IWDTAGQERF T+ SYYRGA GI++VYDVTRR+TFTNL WAKE+ LYSTN D
Sbjct: 64 RLKLTIWDTAGQERFGTVICSYYRGAHGIVLVYDVTRRETFTNLVGTWAKEVGLYSTNHD 123
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
CIK+LVGNKVDKESER V+K+EG+ A+E+ CLF+ECSAKT+ NVQQCF++L LKIL+ P
Sbjct: 124 CIKILVGNKVDKESERAVSKEEGMALAKEHRCLFLECSAKTKENVQQCFKDLTLKILEVP 183
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SL +GS +K+ KQK + GCC
Sbjct: 184 SLREKGSVEVKRQ--KQKRFYETSQRGGCC 211
>gi|357146466|ref|XP_003574002.1| PREDICTED: ras-related protein RABC2a-like [Brachypodium
distachyon]
Length = 217
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 130/210 (61%), Positives = 165/210 (78%), Gaps = 3/210 (1%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF--EELSPTIGVDFKVKYVDVGGKK 61
++ ++ FK+L+IGDSGVGKSSLL+SF + ++++PTIGVDFK+K++ VGGKK
Sbjct: 7 TAGGSSAYECSFKILLIGDSGVGKSSLLVSFVAAATLDDDITPTIGVDFKIKFLTVGGKK 66
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
LKL IWDTAGQERFRT+T SYYRGAQGII+VYDV +R++FTNL+DVW KEID S+N+DC
Sbjct: 67 LKLTIWDTAGQERFRTITGSYYRGAQGIILVYDVAKRESFTNLADVWTKEIDSNSSNKDC 126
Query: 122 IKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 181
IK+LVGNKVDK+ ER VT++EG+ FA E GCLF+E SAKTR NV+ CFE+L LKIL+ PS
Sbjct: 127 IKMLVGNKVDKDDERTVTREEGLAFAEESGCLFLESSAKTRENVENCFEQLTLKILEVPS 186
Query: 182 LLAEG-SKGLKKNIFKQKPPEADAAASGCC 210
LL EG S +K+NI KQ+ CC
Sbjct: 187 LLEEGCSSVVKRNILKQQQESHAKYGGRCC 216
>gi|449465314|ref|XP_004150373.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
gi|449513018|ref|XP_004164205.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
Length = 215
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 166/213 (77%), Gaps = 3/213 (1%)
Query: 1 MDSSSASQ-QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGG 59
M SSS + +DY FK+L+IGDSGVGKSS+LLS+ S+ +LSPTIGVDFK+K V VGG
Sbjct: 2 MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
KKLKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNL +VWAKE++LY TN+
Sbjct: 62 KKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNR 121
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT 179
+CIK+LVGNKVD+ S+R VT +EG+ A+++ LF+ECSA+TR NV +CF+EL K+++
Sbjct: 122 ECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEV 181
Query: 180 PSLLAEGSKGLKKNIF--KQKPPEADAAASGCC 210
PSLL GS +K+ I Q E + GCC
Sbjct: 182 PSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 214
>gi|255584090|ref|XP_002532788.1| protein with unknown function [Ricinus communis]
gi|223527476|gb|EEF29607.1| protein with unknown function [Ricinus communis]
Length = 251
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/247 (54%), Positives = 164/247 (66%), Gaps = 47/247 (19%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
+DY FK+L+IGDSGVGKSS+LLSF S++ +LSPTIGVDFK+K + GGK+LKL IWDTA
Sbjct: 4 YDYSFKILLIGDSGVGKSSILLSFISNSVHDLSPTIGVDFKIKMLSAGGKRLKLTIWDTA 63
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERF TL SSYYRGA GII+VYDVTRR+TFTNLSD WAKE++LYSTN++CIK+LVGNKV
Sbjct: 64 GQERFGTLISSYYRGAHGIILVYDVTRRETFTNLSDTWAKEVELYSTNKECIKVLVGNKV 123
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLK--------------- 175
D++SER V+K+EG+ A E+ C F+ECSAKTR NV QCF+EL LK
Sbjct: 124 DRDSERAVSKEEGMALAEEHKCSFLECSAKTRENVLQCFKELSLKISNIVPFYEYVYCRY 183
Query: 176 --------------------------------ILDTPSLLAEGSKGLKKNIFKQKPPEAD 203
IL+ PSLL GS +K+++ KQK
Sbjct: 184 VNHTLHAILPYYQRGNFKENFELPEAALILEQILEVPSLLENGSAAVKQHVLKQKQEYKA 243
Query: 204 AAASGCC 210
GCC
Sbjct: 244 LHGGGCC 250
>gi|15232785|ref|NP_187602.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|334185198|ref|NP_001189850.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|334185200|ref|NP_001189851.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|75204354|sp|Q9SF92.1|RAC2B_ARATH RecName: Full=Ras-related protein RABC2b; Short=AtRABC2b; AltName:
Full=Ras-related protein Rab18C; Short=AtRab18C
gi|6681328|gb|AAF23245.1|AC015985_3 putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|45773784|gb|AAS76696.1| At3g09910 [Arabidopsis thaliana]
gi|46359845|gb|AAS88786.1| At3g09910 [Arabidopsis thaliana]
gi|332641308|gb|AEE74829.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|332641309|gb|AEE74830.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|332641310|gb|AEE74831.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
Length = 205
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 166/207 (80%), Gaps = 6/207 (2%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLK 63
SS+ Q +D FK+L+IGDSGVGKSSLLLSF S + E+L+PTIGVDFK+K + V GK+LK
Sbjct: 3 SSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKRLK 62
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+R+TF NL+D+WAKEI+LYSTN DCIK
Sbjct: 63 LTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIK 122
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+LVGNKVD+ESER V+++EG+ A++ CLF ECSA+TR NV CFEEL LKI++ PSLL
Sbjct: 123 MLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPSLL 182
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
EGS +K+ P+ A CC
Sbjct: 183 EEGSSSVKRK------PDYRAHQGRCC 203
>gi|297833756|ref|XP_002884760.1| hypothetical protein ARALYDRAFT_478315 [Arabidopsis lyrata subsp.
lyrata]
gi|297330600|gb|EFH61019.1| hypothetical protein ARALYDRAFT_478315 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 166/207 (80%), Gaps = 6/207 (2%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLK 63
SS+ Q +D FK+L+IGDSGVGKSSLLLSF S + E+L+PTIGVDFK+K + V GK+LK
Sbjct: 3 SSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKRLK 62
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+R+TF NL+DVWAKEI+LYSTN DCIK
Sbjct: 63 LTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFMNLADVWAKEIELYSTNHDCIK 122
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+LVGNKVD+ESER V+++EG+ A++ CLF ECSA+TR NV CFEEL LKI++ PSLL
Sbjct: 123 MLVGNKVDRESERKVSQEEGMALAKDLKCLFHECSARTRDNVNWCFEELALKIMEVPSLL 182
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
EGS +K+ P+ + CC
Sbjct: 183 EEGSSSVKRK------PDYRSHQGRCC 203
>gi|303276288|ref|XP_003057438.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461790|gb|EEH59083.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 218
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 120/204 (58%), Positives = 162/204 (79%), Gaps = 2/204 (0%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAI 66
+ + D++ KLL++GDSGVGKSSLL+ FT D FE+ SPTIGVDFK+KY++ GK+LKL +
Sbjct: 15 APEPHDHVIKLLLVGDSGVGKSSLLVRFTDDVFEDQSPTIGVDFKLKYLNARGKRLKLTV 74
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRTLTSSYYRGAQGI+ VYD+T+R++F N+S++WAKE+DLY+T +DC+K+++
Sbjct: 75 WDTAGQERFRTLTSSYYRGAQGIVFVYDITKRESFENVSEIWAKEVDLYATVEDCVKIVI 134
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG 186
GNK+DKE R V++KEG FA + GCLF+E SAK+R NV++ F+ELV ++LDTPSLL E
Sbjct: 135 GNKIDKEKAREVSRKEGEAFAEDNGCLFLETSAKSRRNVKEAFDELVSRVLDTPSLLTEH 194
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
G + + D+A SGC
Sbjct: 195 DPGGGGRVRLNRL--VDSARSGCA 216
>gi|224097728|ref|XP_002311057.1| predicted protein [Populus trichocarpa]
gi|222850877|gb|EEE88424.1| predicted protein [Populus trichocarpa]
Length = 214
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 134/208 (64%), Positives = 161/208 (77%), Gaps = 1/208 (0%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLK 63
S +DY FK+L+IGDSGVGKSSLLLSF S + +LSPTIGVDFKVK + VGGK+LK
Sbjct: 6 SKGGNNSYDYSFKILLIGDSGVGKSSLLLSFISSSVRDLSPTIGVDFKVKMLTVGGKRLK 65
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERF TL SSYYRGA GII+VYDVTRR+TF NLSD+WAKE++LYSTN D IK
Sbjct: 66 LTIWDTAGQERFGTLISSYYRGAHGIILVYDVTRRETFENLSDIWAKEVELYSTNHDGIK 125
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+LVGNKVD++SER V+++EG+ A+++ C F ECSAKT NV QCF+EL LKIL+ PSLL
Sbjct: 126 ILVGNKVDRDSERAVSREEGMALAQQHKCSFFECSAKTSENVLQCFKELTLKILEVPSLL 185
Query: 184 AEGSKGLKKNIFKQKPP-EADAAASGCC 210
GS +K+ I K K +A CC
Sbjct: 186 ENGSVVVKQQIMKDKQVYQAPRGGGSCC 213
>gi|308803965|ref|XP_003079295.1| putative GTP-binding protein RAB1Y (ISS) [Ostreococcus tauri]
gi|116057750|emb|CAL53953.1| putative GTP-binding protein RAB1Y (ISS) [Ostreococcus tauri]
Length = 204
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 158/206 (76%), Gaps = 3/206 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKL 64
S+ + +D+L K+L++GDSGVGKSS++ F SD+FEELSPT+GVDFK+K +DV GK+LKL
Sbjct: 2 SSDEAPYDHLVKILLVGDSGVGKSSIVTRFVSDSFEELSPTVGVDFKLKRLDVDGKRLKL 61
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
+WDTAGQERFRTLTSSYYRGA G++ VYDVT +F L + W KE+D+Y T + +K+
Sbjct: 62 TVWDTAGQERFRTLTSSYYRGAHGVVFVYDVTSAASFAALRETWLKEVDMYGTIESSVKI 121
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
++GNK+DK+SER VT++EG+ FA+E GCLF+ECSAKT+V V + F+ELV IL+TP LL
Sbjct: 122 VIGNKIDKDSERAVTREEGVAFAKENGCLFLECSAKTKVRVAEAFDELVKGILETPGLLV 181
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
+ + G + + AD A SGCC
Sbjct: 182 DSNDGEDR---VKLGAYADHAGSGCC 204
>gi|255076861|ref|XP_002502096.1| predicted protein [Micromonas sp. RCC299]
gi|226517361|gb|ACO63354.1| predicted protein [Micromonas sp. RCC299]
Length = 210
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 118/188 (62%), Positives = 152/188 (80%), Gaps = 4/188 (2%)
Query: 2 DSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKK 61
D FD+ KLL++GDSGVGKSSLLL F +D FEELSPTIGVDFK+KY+D+ GK+
Sbjct: 3 DEGRKDTSHFDHTIKLLLVGDSGVGKSSLLLRFCNDTFEELSPTIGVDFKLKYMDMAGKR 62
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
LKL +WDTAGQERFRTLTS+YYRGAQGI+ VYD+TRRDTF L++VW+KE+++YST +C
Sbjct: 63 LKLTVWDTAGQERFRTLTSAYYRGAQGIVYVYDITRRDTFEALAEVWSKEVEMYSTVDEC 122
Query: 122 IKLLVGNKVDK----ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
+K+++GNKVDK E VT++EG FARE G LF+ECSAKT+V+V++ FEELV ++
Sbjct: 123 VKIVIGNKVDKAKGGREEGWVTREEGETFARESGSLFLECSAKTKVSVREAFEELVKGVM 182
Query: 178 DTPSLLAE 185
+TPSL+ E
Sbjct: 183 ETPSLMEE 190
>gi|384250747|gb|EIE24226.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 200
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 114/177 (64%), Positives = 147/177 (83%), Gaps = 1/177 (0%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAI 66
+ FDYL K+L++GDS VGKSSLLL FT+D FE+ ++PTIGVDF++K++ V K+LKL I
Sbjct: 2 NEPFDYLLKVLLVGDSNVGKSSLLLRFTADTFEDSVAPTIGVDFRLKFLTVNAKRLKLTI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRTLTSSYYRGAQGI+ YDVTRR+TF ++ D+W +E+D+YST + +K++V
Sbjct: 62 WDTAGQERFRTLTSSYYRGAQGIVFAYDVTRRETFESIEDIWMREVDMYSTVDNAVKMIV 121
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
NKVDKE+ER V++ EG FAR++GCLF+E SAK + V Q FEELV+KILDTPSLL
Sbjct: 122 ANKVDKEAEREVSRAEGAAFARKHGCLFVETSAKANMAVGQAFEELVMKILDTPSLL 178
>gi|145346519|ref|XP_001417734.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577962|gb|ABO96027.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 117/208 (56%), Positives = 155/208 (74%), Gaps = 7/208 (3%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLK 63
+S + +D+L K+L++GDSGVGKSSLL F SD+F+E PT+GVDFK+K+VDV G +LK
Sbjct: 2 TSDDARAYDHLVKILLVGDSGVGKSSLLARFISDSFDEQGPTVGVDFKLKHVDVDGTRLK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L +WDTAGQERFRTLTSSYYRGA G++ VYDVT R++F N + W KE+++Y T + +K
Sbjct: 62 LTVWDTAGQERFRTLTSSYYRGAHGVVFVYDVTSRESFENARETWRKEVEMYGTIANSVK 121
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+++GNK+D+E ER V +KEG+ FA+EYGCLF+ECSAKT+V V + F+ELV ILD P LL
Sbjct: 122 IVIGNKIDREDERTVARKEGVAFAKEYGCLFLECSAKTKVRVAEAFDELVKGILDAPGLL 181
Query: 184 A-EGSKGLKKNIFKQKPPEADAAASGCC 210
E G+K + AD A GCC
Sbjct: 182 VDEVDDGVKLGAY------ADRAGGGCC 203
>gi|307111814|gb|EFN60048.1| hypothetical protein CHLNCDRAFT_133281 [Chlorella variabilis]
Length = 202
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 151/204 (74%), Gaps = 7/204 (3%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAI 66
+Q E D+ FK+L++GDSGVGKSSLLL F + FEEL PTIGVDFK K +++GGK+++L +
Sbjct: 6 AQVEVDHTFKILLVGDSGVGKSSLLLRFATGGFEELVPTIGVDFKAKIIELGGKRIRLTV 65
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRTLTSSYYRGAQGII+VYDV+R +TF +L+D+W +E+D+Y T ++ +K++V
Sbjct: 66 WDTAGQERFRTLTSSYYRGAQGIILVYDVSRAETFDSLADIWLREVDMYGTVEESVKMVV 125
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG 186
NK D R V+ G+ FAR +GCLF+E SAK V V+Q FEELV KIL+TPSLLA
Sbjct: 126 ANKTDLAETREVSTDMGVAFARAHGCLFVETSAKGNVAVEQAFEELVHKILETPSLLASS 185
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
K K P+ +S CC
Sbjct: 186 GSTFG---LKTKQPQ----SSSCC 202
>gi|388521533|gb|AFK48828.1| unknown [Medicago truncatula]
Length = 158
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 108/156 (69%), Positives = 134/156 (85%)
Query: 55 VDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDL 114
+ VGGK+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNLS+VW+KE++L
Sbjct: 2 LTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELEL 61
Query: 115 YSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVL 174
YSTNQ+C+K+LVGNKVDK+SER V+++EG++ A+E GCL +ECSAKTR NV++CFEEL L
Sbjct: 62 YSTNQECVKMLVGNKVDKDSERAVSREEGLSLAKELGCLLLECSAKTRENVEKCFEELAL 121
Query: 175 KILDTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
KI++ PSLL EGS K+N+ KQK + GCC
Sbjct: 122 KIMEAPSLLEEGSAATKRNVLKQKQEPQSSQNGGCC 157
>gi|356514705|ref|XP_003526044.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABC1-like
[Glycine max]
Length = 137
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/134 (88%), Positives = 125/134 (93%), Gaps = 1/134 (0%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
MDSS QEFDYLFKLLMIGDSGVGKSSLLLSFTSD FE+LSPTIGVDFKVKYV +GGK
Sbjct: 1 MDSSXG-HQEFDYLFKLLMIGDSGVGKSSLLLSFTSDAFEDLSPTIGVDFKVKYVTMGGK 59
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL ++WAKEIDLYSTNQD
Sbjct: 60 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLFEIWAKEIDLYSTNQD 119
Query: 121 CIKLLVGNKVDKES 134
IK+LVGNK+DK S
Sbjct: 120 YIKMLVGNKLDKVS 133
>gi|255556840|ref|XP_002519453.1| protein with unknown function [Ricinus communis]
gi|223541316|gb|EEF42867.1| protein with unknown function [Ricinus communis]
Length = 325
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 146/177 (82%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGK 60
M S S ++D+ FK+++IGDS VGKSSL++SF S EL TIG+D K+K + VGGK
Sbjct: 101 MGSPSGKGSDYDHSFKIVLIGDSNVGKSSLIVSFISGAVTELPNTIGMDIKMKQITVGGK 160
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYR A GII+VYDVT++ +FTNL ++W KE++LYSTN+D
Sbjct: 161 RLKLTIWDTAGQERFRTLTSSYYRDAHGIILVYDVTQKQSFTNLENLWTKEVELYSTNKD 220
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
CIK+LVGNKVD+ESER V+++EG++ A++ G LF+E SAKTR NV++CF++L LK+L
Sbjct: 221 CIKMLVGNKVDRESERAVSREEGMDLAKQQGFLFLESSAKTRENVEKCFDDLALKML 277
>gi|298712751|emb|CBJ33348.1| Rab18, RAB family GTPase [Ectocarpus siliculosus]
Length = 210
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 153/210 (72%), Gaps = 6/210 (2%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKL 62
++ + +D+LFKLL++GD+ VGKSS++L FT D F++ L TIGVDFKVK VD GGK++
Sbjct: 2 TTRQAEPYDHLFKLLLVGDAAVGKSSIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRI 61
Query: 63 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYST--NQD 120
K+ IWDTAGQERFRTLTSSYYRGAQGI++VYDVTR +TF NLS W +E++ Y ++
Sbjct: 62 KMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSK-WLEEVETYHPGRGRE 120
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
+KLLVGNKVDK ERVVT+ + +AR G LF+E SAKT+V V+Q FEE+V KILD P
Sbjct: 121 VVKLLVGNKVDK--ERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVVQKILDNP 178
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
SLLA + G ++ P + A G C
Sbjct: 179 SLLANTAPGRPRDTVDPSRPNPNQAGGGLC 208
>gi|223973143|gb|ACN30759.1| unknown [Zea mays]
gi|413920115|gb|AFW60047.1| hypothetical protein ZEAMMB73_972006 [Zea mays]
Length = 173
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/125 (89%), Positives = 121/125 (96%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIW 67
Q EFDYLFKLL+IGDSGVGKSSLLL FT+D+FE+LSPTIGVDFKVK V +GGKKLKLAIW
Sbjct: 13 QPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVTIGGKKLKLAIW 72
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRTLTSSYYRGAQG+IMVYDVTRR+TFTNLSD+WAKEIDLYSTNQDCIK+LVG
Sbjct: 73 DTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVG 132
Query: 128 NKVDK 132
NKVDK
Sbjct: 133 NKVDK 137
>gi|428165742|gb|EKX34731.1| hypothetical protein GUITHDRAFT_175416 [Guillardia theta CCMP2712]
Length = 201
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/181 (65%), Positives = 141/181 (77%), Gaps = 3/181 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
FD+ FKLL+ GDSGVGKSS+LL FT D+F P TIGVDFKVK +DV GKK+KL IWDT
Sbjct: 8 FDHRFKLLLTGDSGVGKSSILLRFTDDSFATDQPATIGVDFKVKSIDVEGKKVKLTIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRTLTSSYYRGAQG+I+VYDVTR++TF NL + W KE+D+Y+ +KLLVGNK
Sbjct: 68 AGQERFRTLTSSYYRGAQGVILVYDVTRKETFENL-EQWLKEVDMYTNRDGVVKLLVGNK 126
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
+DK + R VT+ +GI FAR G LFIECSAK + +QQ FEELV KILD+P L+ G
Sbjct: 127 IDK-ANREVTRADGIEFARNRGMLFIECSAKAKTGIQQAFEELVQKILDSPHLVNNEVSG 185
Query: 190 L 190
L
Sbjct: 186 L 186
>gi|414586250|tpg|DAA36821.1| TPA: putative NAC domain transcription factor superfamily protein
[Zea mays]
Length = 160
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/122 (89%), Positives = 119/122 (97%)
Query: 55 VDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDL 114
V +GGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDV+RR+TFTNLSD+WAKEIDL
Sbjct: 2 VSIGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVSRRETFTNLSDIWAKEIDL 61
Query: 115 YSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVL 174
YSTNQDC+K+LVGNKVDKESER VTKKEGI FAREYGCLF+ECSAKT+VNV+QCFEELVL
Sbjct: 62 YSTNQDCVKMLVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVL 121
Query: 175 KI 176
K+
Sbjct: 122 KV 123
>gi|348677906|gb|EGZ17723.1| hypothetical protein PHYSODRAFT_314944 [Phytophthora sojae]
Length = 202
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 155/206 (75%), Gaps = 13/206 (6%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+D+LFKLL+IGD+GVGKSS+LL FT D F++ L TIGVDFKVK + V GKK+K+ IWDT
Sbjct: 4 YDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDT 63
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYST--NQDCIKLLVG 127
AGQERFRTLTSSYYRGAQGI++VYDV RRDTF NL D+W +E+++YS +D +KLLVG
Sbjct: 64 AGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENL-DLWLQEVEVYSPAGGRDVVKLLVG 122
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL---A 184
NK+DK ERVV+++E ++AR G LF+E SAKT++ +QQ F E+V KIL+ P+LL A
Sbjct: 123 NKIDK--ERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTA 180
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
S+G K + E SGCC
Sbjct: 181 PRSRGRKLD----GKAEKSGGGSGCC 202
>gi|301100814|ref|XP_002899496.1| Rab18 family GTPase, putative [Phytophthora infestans T30-4]
gi|262103804|gb|EEY61856.1| Rab18 family GTPase, putative [Phytophthora infestans T30-4]
Length = 202
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 155/206 (75%), Gaps = 13/206 (6%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+D+LFKLL+IGD+GVGKSS+LL FT D F++ L TIGVDFKVK + V GKK+K+ IWDT
Sbjct: 4 YDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDT 63
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYST--NQDCIKLLVG 127
AGQERFRTLTSSYYRGAQGI++VYDV RRDTF NL D+W +E+++YS +D +KLLVG
Sbjct: 64 AGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENL-DLWLQEVEVYSPAGGRDVVKLLVG 122
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL---A 184
NK+DK ERVV+++E ++AR G LF+E SAKT++ +QQ F E+V KIL+ P+LL A
Sbjct: 123 NKIDK--ERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTA 180
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
S+G K + E +GCC
Sbjct: 181 PRSRGRKLD----AKAEKSGGGNGCC 202
>gi|302855274|ref|XP_002959134.1| RabC/Rab18 [Volvox carteri f. nagariensis]
gi|549810|sp|P36862.1|YPTV3_VOLCA RecName: Full=GTP-binding protein yptV3
gi|409164|gb|AAA34252.1| GTP-binding protein [Volvox carteri]
gi|300255496|gb|EFJ39798.1| RabC/Rab18 [Volvox carteri f. nagariensis]
Length = 203
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 137/179 (76%), Gaps = 1/179 (0%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DY FK+L++GDSGVGKS +L FTS FEE + TIGVDFKVKY+ GK+ KL IWDTA
Sbjct: 7 DYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDTA 66
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRTLTSSYYRGAQGII VYDVTRRDTF +L W +E D+YST + IK++V NKV
Sbjct: 67 GQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVANKV 126
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
D ++R V+ +EG +FAR +GCLF+E SA+ + V Q FEEL+LKILDTP LL + G
Sbjct: 127 DLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAVG 185
>gi|440797100|gb|ELR18195.1| rasrelated protein Rab-18-like, putative [Acanthamoeba castellanii
str. Neff]
Length = 209
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 113/211 (53%), Positives = 149/211 (70%), Gaps = 3/211 (1%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGG 59
M+ ++ S FD+LFKLL+IGDS VGKSS+LL FT D F++ P TIGVDFKVK + +G
Sbjct: 1 MEGTTGSASHFDHLFKLLIIGDSSVGKSSILLRFTEDEFDDEHPVTIGVDFKVKTIQLGA 60
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
K++ L IWDTAGQE+FR+LTSSYYRG QGII+VYDV+ R++F +LS VW EI++Y N
Sbjct: 61 KRINLTIWDTAGQEKFRSLTSSYYRGTQGIILVYDVSSRESFQHLS-VWLNEIEMYCNNS 119
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT 179
D +KLLV NK+D +R V+++EG+ FA+ +FIECSAKT++ +QQ FEELV KIL+T
Sbjct: 120 DVVKLLVANKIDL-GDRQVSREEGLAFAKSKAMVFIECSAKTKLGIQQAFEELVTKILET 178
Query: 180 PSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
PSL + +K Q E C
Sbjct: 179 PSLYEKETKATGTVSMNQDSEEQQEGVCSYC 209
>gi|159478503|ref|XP_001697342.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158274500|gb|EDP00282.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 202
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 136/179 (75%), Gaps = 1/179 (0%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DY FK+L++GDSGVGKS +L FTS +FEE + TIGVDFKVKY++ GK+ KL +WDTA
Sbjct: 6 DYTFKVLLVGDSGVGKSCILTRFTSGSFEENTTSTIGVDFKVKYLEAEGKRCKLTVWDTA 65
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRTLTSSYYRGAQGII VYDVTRR+TF L W +E D+YST + I+++V NK
Sbjct: 66 GQERFRTLTSSYYRGAQGIIFVYDVTRRETFEALEGAWMREWDMYSTVEGAIQMVVANKT 125
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
D +S R V +EG +FAR +GCLF+E SAK V V Q FEEL+ KILDTP+LL + G
Sbjct: 126 DLDSARQVATQEGHDFARRHGCLFVETSAKGNVAVGQAFEELLAKILDTPALLETTAVG 184
>gi|412988755|emb|CCO15346.1| unknown [Bathycoccus prasinos]
Length = 225
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/188 (57%), Positives = 148/188 (78%), Gaps = 4/188 (2%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDN--FEELSPTIGVDFKVKYVDV--GGKKLKL 64
+E+ +L K+L++GDSGVGKSSLL F + E++S TIGVDFK+KYV + + +KL
Sbjct: 12 REYSHLIKVLLVGDSGVGKSSLLSRFIDPDTDLEDISTTIGVDFKLKYVKLKQTNETVKL 71
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
+WDTAGQERFRTLTSSYYRGAQGI+ VYD++ +++F ++ +VW KE+D+YST D IK+
Sbjct: 72 TVWDTAGQERFRTLTSSYYRGAQGIVFVYDISSKESFESVENVWQKEVDMYSTIPDAIKI 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
+VGNKVDKE+ER V K++ I FAR GCLF+ECSAKTRV+V++ F+EL+ I++TPSLL
Sbjct: 132 VVGNKVDKENERKVKKEDAIAFARRNGCLFLECSAKTRVSVKEIFDELLQAIVETPSLLK 191
Query: 185 EGSKGLKK 192
+G G K
Sbjct: 192 DGPSGNSK 199
>gi|384485982|gb|EIE78162.1| hypothetical protein RO3G_02866 [Rhizopus delemar RA 99-880]
Length = 203
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 139/176 (78%), Gaps = 4/176 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAG 71
KLL+IG+S VGKSSLLL FT D F EE+S TIGVDFKV +DV K KL IWDTAG
Sbjct: 8 LKLLLIGNSNVGKSSLLLRFTDDTFLPQEEVSATIGVDFKVSMMDVNDKTYKLTIWDTAG 67
Query: 72 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVD 131
QERFRTLTSSYYRGAQG+I+VYDV+ R+TF L++ W E++ Y ++ D +K++VGNKVD
Sbjct: 68 QERFRTLTSSYYRGAQGVILVYDVSNRETFDALNN-WWNEVNTYCSSPDVVKMIVGNKVD 126
Query: 132 KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
KES RVV+ +EG+NFAR+ LF+ECSAKT+V V+Q FEELV KI++TPSL + +
Sbjct: 127 KESSRVVSYEEGLNFARKLQTLFVECSAKTKVGVKQAFEELVEKIIETPSLWQKNT 182
>gi|325186904|emb|CCA21448.1| Rab18 family GTPase putative [Albugo laibachii Nc14]
Length = 201
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 153/205 (74%), Gaps = 8/205 (3%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFK+L+IGD+GVGKSS+LL FT D F+ L TIGVDFKVK + V ++K+ IW
Sbjct: 2 ESYDHLFKILLIGDAGVGKSSILLRFTDDKFDGNLQSTIGVDFKVKMMQVDSSRIKVTIW 61
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYST--NQDCIKLL 125
DTAGQERFRTLTSSYYRGAQGI++VYDV+RR+TF +L D W +EI++YS +D +KLL
Sbjct: 62 DTAGQERFRTLTSSYYRGAQGIVLVYDVSRRETFESL-DTWLREIEIYSPAGGRDVVKLL 120
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
VGNKVDK+ ER V++KE ++AR G LF+E SAKTR+ + Q F+E+V KIL+ PSLLA
Sbjct: 121 VGNKVDKQ-ERSVSRKEAEDWARNKGMLFLESSAKTRIGILQVFDEVVQKILENPSLLAS 179
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
+ ++ ++ + A S CC
Sbjct: 180 TAPRVRG---QKLSNHTEPAGSVCC 201
>gi|397635930|gb|EJK72074.1| hypothetical protein THAOC_06432 [Thalassiosira oceanica]
Length = 224
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 144/200 (72%), Gaps = 9/200 (4%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGG 59
M SS +D+LFKLLMIGD+ VGKSS+L+ FT D F+E + TIGVDFKVK++++
Sbjct: 1 MASSRPQAFPYDHLFKLLMIGDAAVGKSSMLIRFTDDAFDEHIQSTIGVDFKVKHLELNS 60
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTN- 118
K++KL +WDTAGQERFRTLTSSYYRGAQG++MVYDVTRRD+F NL D W KEI LYS N
Sbjct: 61 KRIKLTVWDTAGQERFRTLTSSYYRGAQGVVMVYDVTRRDSFDNL-DHWLKEIQLYSPNS 119
Query: 119 -QDCIKLLVGNKVD-----KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEEL 172
+ +KLLVGNK+D E ER V + E +ARE+G LF+E SAKT+ +Q+ F E+
Sbjct: 120 GEGVVKLLVGNKIDLPEMGGEHERQVDRDEAEEWAREHGMLFLEASAKTKAGIQESFMEV 179
Query: 173 VLKILDTPSLLAEGSKGLKK 192
V KIL+ P LL G K
Sbjct: 180 VYKILEDPDLLLNTVPGQPK 199
>gi|422295322|gb|EKU22621.1| rab18 -family small gtpase, partial [Nannochloropsis gaditana
CCMP526]
Length = 244
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 155/210 (73%), Gaps = 17/210 (8%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGD+GVGKSS+LL FT D F++ TIGVDFKVK ++V K++K+ IW
Sbjct: 44 EPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVDHKRIKMTIW 103
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYST--NQDCIKLL 125
DTAGQERFRTLTSSYYRGAQGII+VYDV RR++F NL+ W +E+++YST ++ +K+L
Sbjct: 104 DTAGQERFRTLTSSYYRGAQGIILVYDVNRRESFENLNH-WLQEVEVYSTGGGREIVKVL 162
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
VGNKVDK ER+V ++E +AR G LF+E SAKTR ++Q F E+V KILD PSLL
Sbjct: 163 VGNKVDK--ERMVPREEAEAWARSKGMLFLEASAKTRTGIRQVFLEVVQKILDNPSLLTN 220
Query: 186 GSKGLKK-NIFKQKPPEADAAASG----CC 210
+ G + N+ +ADAAA G CC
Sbjct: 221 TAPGRPRVNL------QADAAAKGSGGYCC 244
>gi|326529385|dbj|BAK01086.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 155
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/154 (68%), Positives = 125/154 (81%), Gaps = 1/154 (0%)
Query: 58 GGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYST 117
GGKKLKL IWDTAGQERFRT+TSSYYRGAQGII+VYDV +R++FTNL DVW KEID S+
Sbjct: 1 GGKKLKLTIWDTAGQERFRTITSSYYRGAQGIILVYDVAKRESFTNLGDVWTKEIDSNSS 60
Query: 118 NQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
N+DCIK+LVGNKVDK+ ER VT++EG+ FA+E GCLF+E SAKTR NV+ CFEELVLKIL
Sbjct: 61 NKDCIKMLVGNKVDKDDERTVTREEGLAFAQESGCLFLESSAKTRENVENCFEELVLKIL 120
Query: 178 DTPSLLAEGSKG-LKKNIFKQKPPEADAAASGCC 210
+ PSLL EGS +K+NI KQ+ CC
Sbjct: 121 EVPSLLEEGSSSVVKRNILKQQQESHAKYGGRCC 154
>gi|221487606|gb|EEE25838.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 212
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 143/212 (67%), Gaps = 5/212 (2%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGG 59
M + +D+L KLL+IGDSGVGKSS+LL F D F E TIGVDFKVK + VG
Sbjct: 1 MHGRAGEPASYDHLLKLLLIGDSGVGKSSILLRFAEDVFNEKQLSTIGVDFKVKAMTVGD 60
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
+LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDV+ R +F NL W EI YSTN
Sbjct: 61 MRLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVSNRQSFLNLQS-WLDEIYRYSTNA 119
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT 179
D + +LV NKVDK + + V ++EG FA + G LF+E SAKTR V FEELV KILDT
Sbjct: 120 DAVLMLVANKVDKRTVQ-VERREGEAFAFQKGMLFVETSAKTRQGVDHAFEELVQKILDT 178
Query: 180 PSLLAEGSK--GLKKNIFKQKPPEADAAASGC 209
PSLL S + + + +A AA+GC
Sbjct: 179 PSLLVNTSPIGAAPRQLSHAREGDALNAAAGC 210
>gi|237830465|ref|XP_002364530.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211962194|gb|EEA97389.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221507403|gb|EEE33007.1| rab5, putative [Toxoplasma gondii VEG]
Length = 212
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 143/212 (67%), Gaps = 5/212 (2%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGG 59
M + +D+L KLL+IGDSGVGKSS+LL F D F E TIGVDFKVK + VG
Sbjct: 1 MHGRAGEPASYDHLLKLLLIGDSGVGKSSILLRFAEDVFNEKQLSTIGVDFKVKAMTVGD 60
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
+LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDV+ R +F NL W EI YSTN
Sbjct: 61 MRLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVSNRQSFLNLQS-WLDEIYRYSTNA 119
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT 179
D + +LV NKVDK + + V ++EG FA + G LF+E SAKTR V FEELV KILDT
Sbjct: 120 DAVLMLVSNKVDKRTVQ-VERREGEAFAFQKGMLFVETSAKTRQGVDHAFEELVQKILDT 178
Query: 180 PSLLAEGSK--GLKKNIFKQKPPEADAAASGC 209
PSLL S + + + +A AA+GC
Sbjct: 179 PSLLVNTSPIGAAPRQLSHAREGDALNAAAGC 210
>gi|213515510|ref|NP_001133260.1| Ras-related protein Rab-18 [Salmo salar]
gi|209148105|gb|ACI32921.1| Ras-related protein Rab-18 [Salmo salar]
Length = 206
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/169 (66%), Positives = 131/169 (77%), Gaps = 2/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAVDGNSAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVT+RDTFT L + W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTKRDTFTRLEN-WLNELETYCTRNDLVKMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
RVV + EG+ FAR++ LFIE SAKTR VQ FEELV KIL TP L
Sbjct: 128 ENRVVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGL 176
>gi|388490950|gb|AFK33541.1| unknown [Medicago truncatula]
Length = 122
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/120 (84%), Positives = 112/120 (93%)
Query: 91 MVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREY 150
MVYDVTRR+TFTNLSD+WAKEIDLYSTNQDCIK+LVGNKVDKESER VTKKE ++FAR+Y
Sbjct: 1 MVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVTKKEAVDFARQY 60
Query: 151 GCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
GCL+ ECSAKTRVNV+QCFEELV+KILDTPSLLAEGS G+KKNIFKQKP E DA+ S CC
Sbjct: 61 GCLYTECSAKTRVNVEQCFEELVMKILDTPSLLAEGSSGVKKNIFKQKPQEFDASPSSCC 120
>gi|62859745|ref|NP_001017281.1| RAB18, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267454|emb|CAJ81541.1| RAB18, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134026214|gb|AAI35987.1| RAB18, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 206
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 113/169 (66%), Positives = 132/169 (78%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTFT L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFTRL-DNWLNELETYCTRNDIVKMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKTR VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGL 175
>gi|148224120|ref|NP_001079868.1| uncharacterized protein LOC379558 [Xenopus laevis]
gi|33416686|gb|AAH56054.1| MGC69017 protein [Xenopus laevis]
Length = 205
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 139/179 (77%), Gaps = 4/179 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTFT L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFTRL-DNWLNELETYCTRNDIVKMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL-AEGSKGLK 191
+ R V + EG+ FAR++ L+IE SAKTR VQ FEELV KI+ TP L +E ++G++
Sbjct: 128 N-REVDRNEGLKFARKHSMLYIEASAKTRDGVQCAFEELVEKIIQTPGLWESETNRGVR 185
>gi|401411617|ref|XP_003885256.1| Rab1-prov protein, related [Neospora caninum Liverpool]
gi|325119675|emb|CBZ55228.1| Rab1-prov protein, related [Neospora caninum Liverpool]
Length = 212
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 143/212 (67%), Gaps = 5/212 (2%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGG 59
M + + +D+L KLL+IGDSGVGKSS+LL F+ D F E TIGVDFKVK + VG
Sbjct: 1 MQVPAGATASYDHLLKLLLIGDSGVGKSSILLRFSEDVFNEKQLSTIGVDFKVKAITVGD 60
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
+LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDV+ R +F +L W EI YSTN
Sbjct: 61 ARLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVSNRQSFLDLQS-WLDEIYRYSTNA 119
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT 179
D + +LV NK+DK + V ++EG FA + G LF+E SAKTR V FEELV KILDT
Sbjct: 120 DAVIMLVANKIDKRTVE-VERREGEAFAYQKGMLFVETSAKTRQGVDHAFEELVQKILDT 178
Query: 180 PSLLAEGSK--GLKKNIFKQKPPEADAAASGC 209
PSLL S + + + +A A SGC
Sbjct: 179 PSLLENTSPVGAAPRQLSYSRDGDAVNAPSGC 210
>gi|320167405|gb|EFW44304.1| GTP-binding protein yptV3 [Capsaspora owczarzaki ATCC 30864]
Length = 205
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 139/196 (70%), Gaps = 5/196 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
FKLL++G+S GKSSL++ FT + F+E LS TIGVDFKVK + + +KL IWDTAGQE
Sbjct: 11 FKLLLVGESNTGKSSLIMRFTDNVFDEDLSATIGVDFKVKQMFLNDTTIKLTIWDTAGQE 70
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLTSS+YRGA G+I VYDVTRR+TF D W E+D Y+TN D +K+L+GNK+D+
Sbjct: 71 RFRTLTSSFYRGAHGVIFVYDVTRRETFDTALDTWLTEVDTYATN-DVVKMLIGNKIDQT 129
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
ER V++ EG+ FA+ + LFIECSA+TRV V+Q FEELV K+ DTP+L G N
Sbjct: 130 EERQVSRAEGLAFAQRHSMLFIECSARTRVGVEQAFEELVQKMYDTPALWRTGP---TNN 186
Query: 194 IFKQKPPEADAAASGC 209
+ EA A GC
Sbjct: 187 VQLGGAEEAPALDQGC 202
>gi|388854821|emb|CCF51502.1| probable Ras-related protein Rab-18 [Ustilago hordei]
Length = 232
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/198 (56%), Positives = 144/198 (72%), Gaps = 6/198 (3%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAG 71
K+L+IG S VGKSSLLL FT D F EE + TIGVD+++K ++VGGK+ KL+IWDTAG
Sbjct: 9 LKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTAG 68
Query: 72 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVD 131
QERFRTLTSSYYRGAQG+I+ YDVT+RDTF L W E++ ++T++D +K++VGNKVD
Sbjct: 69 QERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALP-TWFNELETFTTSEDVVKIIVGNKVD 127
Query: 132 KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLK 191
KE RVVT +EG FA + GCLF+ECSAK V V F+ELV +I+ TPSL + + G +
Sbjct: 128 KEFSRVVTTEEGQGFADKMGCLFVECSAKKGVGVNGAFDELVNRIISTPSLWQKTAPGER 187
Query: 192 K--NIFKQKPPEADAAAS 207
+ + P A AA S
Sbjct: 188 RPGDRMPGGVPAAHAADS 205
>gi|348531663|ref|XP_003453328.1| PREDICTED: ras-related protein Rab-18-B-like [Oreochromis
niloticus]
Length = 205
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/197 (58%), Positives = 142/197 (72%), Gaps = 8/197 (4%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
KLL+IG+SGVGKSSLLL FT D F+ E S TIGVDFKVK + + G K KLAIWDTAGQE
Sbjct: 9 LKLLIIGESGVGKSSLLLRFTEDTFDPEQSATIGVDFKVKTLAIDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVT+RDTFT L + W E++ Y+T D +K+LVGNK+DK+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYTTRNDIVKMLVGNKIDKD 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+R V + EG+ FAR++ LFIE SAKT+ VQ FEELV KIL TP L ++G K
Sbjct: 128 -DREVDRNEGLKFARKHSMLFIEASAKTKDGVQCAFEELVEKILQTPGLWESENQGQKVR 186
Query: 194 IFKQKPPEADAAASGCC 210
+ Q + A G C
Sbjct: 187 LGDQ-----EHARPGVC 198
>gi|223996783|ref|XP_002288065.1| at-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220977181|gb|EED95508.1| at-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 197
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 139/189 (73%), Gaps = 10/189 (5%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKK 61
SS +D+LFKLLMIGD+GVGKSS+L+ FT D F+E + TIGVDFKVK++++ K+
Sbjct: 10 SSKGQSFPYDHLFKLLMIGDAGVGKSSMLIRFTDDAFDEHIQSTIGVDFKVKHLELNNKR 69
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTN--Q 119
+KL +WDTAGQERFRTLTSSYYRGAQG++MVYDVTRRD+F NL + W KE+ LYS N +
Sbjct: 70 IKLTVWDTAGQERFRTLTSSYYRGAQGVVMVYDVTRRDSFDNL-EQWLKEVKLYSPNNGE 128
Query: 120 DCIKLLVGNKVDKES------ERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELV 173
+KLLVGNK+D ER V + E +AR G LF+E SAKTR+ VQ+ F E+V
Sbjct: 129 GVVKLLVGNKIDLADGDGSGYERQVDRHEAEEWARNQGMLFLEASAKTRMGVQESFMEVV 188
Query: 174 LKILDTPSL 182
KIL+ P L
Sbjct: 189 HKILEDPDL 197
>gi|47228002|emb|CAF97631.1| unnamed protein product [Tetraodon nigroviridis]
Length = 205
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 112/197 (56%), Positives = 142/197 (72%), Gaps = 3/197 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
KLL+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + + G + KLAIWDTAGQE
Sbjct: 9 LKLLIIGESGVGKSSLLLRFTDDMFDPELAATIGVDFKVKTLAIDGNRAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVT+RDTF L + W E++ Y++ + +K+LVGNK+DK+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTKRDTFAKLEN-WLNELETYTSRNNLVKMLVGNKIDKD 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+R V + EG+ FAR++ LFIE SAKT+ VQ FEELV KIL TP L S G +
Sbjct: 128 -DREVDRHEGLKFARKHSMLFIEASAKTKDGVQCAFEELVEKILQTPGLWESDSPGQRLQ 186
Query: 194 IFKQKPPEADAAASGCC 210
+ +Q+ A G C
Sbjct: 187 LTEQQQQGGGRACGGYC 203
>gi|71019037|ref|XP_759749.1| hypothetical protein UM03602.1 [Ustilago maydis 521]
gi|46099272|gb|EAK84505.1| hypothetical protein UM03602.1 [Ustilago maydis 521]
Length = 233
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/181 (59%), Positives = 137/181 (75%), Gaps = 4/181 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAG 71
K+L+IG S VGKSSLLL FT D F EE + TIGVD+++K ++VGGK+ KL+IWDTAG
Sbjct: 10 LKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTAG 69
Query: 72 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVD 131
QERFRTLTSSYYRGAQG+I+ YDVT+RDTF L W E++ ++T+ D +K++VGNKVD
Sbjct: 70 QERFRTLTSSYYRGAQGVIITYDVTQRDTFDALP-TWFNELETFTTSDDVVKVIVGNKVD 128
Query: 132 KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLK 191
KE RVVT KEG FA + GCLF+ECSAK V V F+ELV +I+ TPSL + + G +
Sbjct: 129 KEFSRVVTTKEGQEFAEKMGCLFVECSAKKGVGVNGAFDELVNRIISTPSLWQKTAPGER 188
Query: 192 K 192
+
Sbjct: 189 R 189
>gi|319411948|emb|CBQ73991.1| probable Ras-related protein Rab-18 [Sporisorium reilianum SRZ2]
Length = 233
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 111/198 (56%), Positives = 143/198 (72%), Gaps = 6/198 (3%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAG 71
K+L+IG S VGKSSLLL FT D F EE + TIGVD+++K ++VGGK+ KL+IWDTAG
Sbjct: 10 LKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTAG 69
Query: 72 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVD 131
QERFRTLTSSYYRGAQG+I+ YDVT+RDTF L W E++ ++T+ D +K++VGNKVD
Sbjct: 70 QERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALP-TWFNELETFTTSDDVVKIIVGNKVD 128
Query: 132 KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLK 191
KE RVVT +EG FA + GCLF+ECSAK V V F+ELV +I+ TPSL + + G +
Sbjct: 129 KEFSRVVTTQEGQAFADKMGCLFVECSAKKGVGVNGAFDELVNRIISTPSLWQKTAPGDR 188
Query: 192 K--NIFKQKPPEADAAAS 207
+ + P A AA S
Sbjct: 189 RPGDRMPGGVPAAHAADS 206
>gi|147900430|ref|NP_001084300.1| RAB18, member RAS oncogene family [Xenopus laevis]
gi|49256207|gb|AAH74233.1| RAB18 protein [Xenopus laevis]
Length = 206
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 111/169 (65%), Positives = 130/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNNAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDV RRDTFT L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVARRDTFTRL-DNWLNELETYCTRNDIVKMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKTR VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGL 175
>gi|343172006|gb|AEL98707.1| Ras-like protein, partial [Silene latifolia]
Length = 110
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 107/109 (98%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
EFDYLFKLLMIGDSGVGKSSLLLSFTSD FE+LSPTIGVDFKVKYV++GGKKLKLAIWDT
Sbjct: 2 EFDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLSPTIGVDFKVKYVNMGGKKLKLAIWDT 61
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTN 118
AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL DVWAKEIDLYSTN
Sbjct: 62 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLRDVWAKEIDLYSTN 110
>gi|51010979|ref|NP_001003449.1| ras-related protein Rab-18-B [Danio rerio]
gi|82183235|sp|Q6DHC1.1|RB18B_DANRE RecName: Full=Ras-related protein Rab-18-B; Flags: Precursor
gi|50370256|gb|AAH76054.1| RAB18B, member RAS oncogene family [Danio rerio]
Length = 205
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 115/197 (58%), Positives = 139/197 (70%), Gaps = 4/197 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + + G + KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVT+RDTFT L + W E++ Y T D +K+LVGNK+DK+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKIDKD 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+ R V + EG+ FAR++ LFIE SAKTR VQ FEELV KIL TP L E S
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLW-ESSIQNHGV 185
Query: 194 IFKQKPPEADAAASGCC 210
P+ A G C
Sbjct: 186 QLSDNEPQRQGACGGYC 202
>gi|219116893|ref|XP_002179241.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409132|gb|EEC49064.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 213
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 144/206 (69%), Gaps = 9/206 (4%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYLFK+L+IGD+ VGKSS+LL FT D+F+E + TIGVDFKVK+++V GK++KL IWDT
Sbjct: 11 YDYLFKVLIIGDASVGKSSMLLRFTDDSFDEHIQSTIGVDFKVKHLEVEGKRVKLTIWDT 70
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYS--TNQDCIKLLVG 127
AGQERFRTLTSSYYRGA G+++VYDVTR D+F NL W KE+ +YS + +KLLVG
Sbjct: 71 AGQERFRTLTSSYYRGAHGVVLVYDVTRTDSFENLQQ-WLKEVQMYSPGNGESVVKLLVG 129
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D ER V +E +AR G LF+E SAKTR+ ++Q F E+V K+L+ P LA
Sbjct: 130 NKCD--LERQVPFEEADAWARSQGMLFLEASAKTRLGIRQVFTEVVKKMLENPETLATAV 187
Query: 188 KGLKKNIFKQ---KPPEADAAASGCC 210
G K K +P D SGCC
Sbjct: 188 PGRPKVQIKPQHARPNMMDDEESGCC 213
>gi|27882648|gb|AAH43996.1| RAB18 protein, partial [Xenopus laevis]
Length = 212
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/169 (65%), Positives = 130/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G KLAIWDTAGQE
Sbjct: 15 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNNAKLAIWDTAGQE 74
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDV RRDTFT L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 75 RFRTLTPSYYRGAQGVILVYDVARRDTFTRL-DNWLNELETYCTRNDIVKMLVGNKIDKE 133
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKTR VQ FEELV KI+ TP L
Sbjct: 134 N-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGL 181
>gi|294888082|ref|XP_002772341.1| Rab18 GTPase, putative [Perkinsus marinus ATCC 50983]
gi|239876460|gb|EER04157.1| Rab18 GTPase, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 138/174 (79%), Gaps = 2/174 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWDT 69
+D+LFKLL+IGDSGVGKS LLL F D F + TIGVDFKVKY+ + GK+LKLAIWDT
Sbjct: 6 YDHLFKLLIIGDSGVGKSCLLLRFCDDEFNDKQLATIGVDFKVKYLSLMGKRLKLAIWDT 65
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRTLTSSYYRGAQGI++VYDVT R++F NL + W +E+ Y+T++ +K+LV NK
Sbjct: 66 AGQERFRTLTSSYYRGAQGIVLVYDVTSRESFENL-EYWLEEVRKYATSRSSVKMLVANK 124
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
VD+ + VT++EG FA E+ LFIE SAK +V V++ F++LVLKILDTP LL
Sbjct: 125 VDEVNGGDVTRREGEKFAIEHDMLFIESSAKLKVGVKEIFQQLVLKILDTPDLL 178
>gi|34068436|gb|AAQ56773.1| ras-related GTP-binding protein Rab18 [Pelophylax ridibundus]
Length = 205
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 130/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFK K + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKAKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D +K+LVGNK+DK+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFARL-DNWLNELETYCTRNDIVKMLVGNKIDKD 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKTR VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGL 175
>gi|291401957|ref|XP_002717338.1| PREDICTED: RAB18, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 206
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 138/197 (70%), Gaps = 3/197 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L ++
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESETQNKGVK 186
Query: 194 IFKQKPPEADAAASGCC 210
+ ++ A SG C
Sbjct: 187 LSHREEGHGAGACSGYC 203
>gi|432913216|ref|XP_004078963.1| PREDICTED: ras-related protein Rab-18-B-like [Oryzias latipes]
Length = 205
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 141/195 (72%), Gaps = 5/195 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
KLL+IG+SGVGKSSLLL FT D F+ E S TIGVDFKVK + + G K KLAIWDTAGQE
Sbjct: 9 LKLLIIGESGVGKSSLLLRFTEDTFDPEQSATIGVDFKVKTLAIEGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDV+RRD+FT L + W E++ Y+T D +K+LVGNK+DK+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVSRRDSFTKLEN-WLNELETYTTRNDIVKMLVGNKIDKD 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+R V + EG+ FAR++ LFIE SAKT+ VQ FEELV KIL TP L S+G
Sbjct: 128 -DREVDRNEGLKFARKHSMLFIEASAKTKDGVQCAFEELVEKILQTPGLWE--SEGPGHR 184
Query: 194 IFKQKPPEADAAASG 208
+ P +A A G
Sbjct: 185 VQLGSPDQAGGRACG 199
>gi|89258427|gb|ABD65437.1| Rab18 [Suberites domuncula]
Length = 202
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 136/176 (77%), Gaps = 3/176 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
KLL+IGDSG GKSSLLL FT+D F+ ++S TIGVDFKVK + + K+ KL+IWDTAGQE
Sbjct: 6 LKLLIIGDSGAGKSSLLLRFTNDTFDPDVSATIGVDFKVKTLVLDEKRTKLSIWDTAGQE 65
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYD + R++F L +VW E+D Y+T +D IK+LV NK+DK
Sbjct: 66 RFRTLTPSYYRGAQGVILVYDASSRESFEGL-EVWLNELDTYATKKDLIKMLVANKIDKT 124
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL-LAEGSK 188
SER V++ +G+ FAR LFIE SAKTR VQ+ FEELV KIL TPSL + +G K
Sbjct: 125 SERQVSRSDGLQFARRNSMLFIEASAKTRDGVQEAFEELVHKILQTPSLYMVDGPK 180
>gi|443895663|dbj|GAC73008.1| GTPase Rab18 [Pseudozyma antarctica T-34]
Length = 233
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 137/181 (75%), Gaps = 4/181 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAG 71
K+L+IG S VGKSSLLL FT D F EE + TIGVD+++K ++VGGK+ KL+IWDTAG
Sbjct: 10 LKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTAG 69
Query: 72 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVD 131
QERFRTLTSSYYRGAQG+I+ YDVT+RDTF L W E++ ++T++D +K++VGNKVD
Sbjct: 70 QERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALP-TWFNELETFTTSEDVVKIIVGNKVD 128
Query: 132 KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLK 191
KE RVVT EG FA + GCLF+ECSAK V V F+ELV +I+ TPSL + + G +
Sbjct: 129 KEFSRVVTTDEGQAFADKMGCLFVECSAKKGVGVNGAFDELVNRIISTPSLWQKTAPGDR 188
Query: 192 K 192
+
Sbjct: 189 R 189
>gi|432926809|ref|XP_004080935.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-18-like
[Oryzias latipes]
Length = 204
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 131/176 (74%), Gaps = 3/176 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ E S TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTEDTFDPEQSATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRR+TFT L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRETFTKL-DNWLNELETYCTRNDLVKMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
S V + EG+ FAR++ LFIE SAKT+ VQ FEELV K++ TP + G
Sbjct: 128 SHE-VDRAEGLKFARKHSTLFIEASAKTKDGVQCAFEELVEKVIQTPGXWQSENHG 182
>gi|395539893|ref|XP_003771898.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Sarcophilus
harrisii]
Length = 205
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 138/195 (70%), Gaps = 5/195 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L S+ K
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE--SENQNKG 184
Query: 194 IFKQKPPEADAAASG 208
+ E+ A G
Sbjct: 185 VRLSHREESHGGACG 199
>gi|348525554|ref|XP_003450287.1| PREDICTED: ras-related protein Rab-18-like [Oreochromis niloticus]
Length = 204
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 132/176 (75%), Gaps = 3/176 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ E S TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTEDTFDPEQSATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRR+TFT L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRETFTKL-DNWLSELETYCTRNDLVKMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
+ + + EG+ FAR++ LFIE SAKTR VQ FEELV KI+ TP L + G
Sbjct: 128 NHE-LDRAEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWQSENHG 182
>gi|57530682|ref|NP_001006355.1| ras-related protein Rab-18 [Gallus gallus]
gi|82233892|sp|Q5ZLG1.1|RAB18_CHICK RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|53129987|emb|CAG31432.1| hypothetical protein RCJMB04_6g4 [Gallus gallus]
Length = 206
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 135/180 (75%), Gaps = 5/180 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS--KGLK 191
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L S KG+K
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESESQNKGVK 186
>gi|126341216|ref|XP_001367066.1| PREDICTED: ras-related protein Rab-18-like [Monodelphis domestica]
Length = 205
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 138/195 (70%), Gaps = 5/195 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLSELETYCTRNDIVKMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L S+ K
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE--SENQNKG 184
Query: 194 IFKQKPPEADAAASG 208
+ E+ A G
Sbjct: 185 VRLSHREESHGGACG 199
>gi|410933135|ref|XP_003979947.1| PREDICTED: ras-related protein Rab-18-like isoform 2 [Takifugu
rubripes]
Length = 205
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 131/176 (74%), Gaps = 2/176 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ + + TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPDQAATIGVDFKVKTITVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTR++TFT L D W E++ Y T D +K+LVGNK+D+E
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRQETFTKL-DNWLNELETYCTRNDLVKMLVGNKIDRE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
R V + EG+ FAR++ LFIE SAKTR VQ FEELV KI+ TP L G
Sbjct: 128 ENREVERPEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKIIQTPGLWQSEKHG 183
>gi|354473456|ref|XP_003498951.1| PREDICTED: ras-related protein Rab-18-like [Cricetulus griseus]
gi|344249075|gb|EGW05179.1| Ras-related protein Rab-18 [Cricetulus griseus]
Length = 206
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 137/197 (69%), Gaps = 3/197 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L ++
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVK 186
Query: 194 IFKQKPPEADAAASGCC 210
+ ++ A G C
Sbjct: 187 LSHREESHGGGACGGYC 203
>gi|294931937|ref|XP_002780061.1| GTP-binding protein yptV3, putative [Perkinsus marinus ATCC 50983]
gi|239889905|gb|EER11856.1| GTP-binding protein yptV3, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 136/174 (78%), Gaps = 2/174 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWDT 69
+D+LFKLL+IGDSGVGKS LLL F D F + TIGVDFKVKY+ GK+LKLAIWDT
Sbjct: 6 YDHLFKLLIIGDSGVGKSCLLLRFCDDEFNDKQLATIGVDFKVKYISSMGKRLKLAIWDT 65
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRTLTSSYYRGAQGI++VYDV R++F NL + W +E+ Y+T++ +K+LV NK
Sbjct: 66 AGQERFRTLTSSYYRGAQGIVLVYDVNSRESFENL-EYWLEEVRKYATSRSSVKMLVANK 124
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
VD+ + VT++EG FA E+ LFIE SAK +V V++ F++LVLKILDTP LL
Sbjct: 125 VDEVNGGDVTRREGEKFAIEHDMLFIESSAKLKVGVKEIFQQLVLKILDTPDLL 178
>gi|343172008|gb|AEL98708.1| Ras-like protein, partial [Silene latifolia]
Length = 110
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 103/109 (94%), Positives = 106/109 (97%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
EFDYLFKLLMIGDSGVGKSSLLLSFTSD FE+LSPTIGVDFKVKYV++GGKKLKLAIWDT
Sbjct: 2 EFDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLSPTIGVDFKVKYVNMGGKKLKLAIWDT 61
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTN 118
AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL VWAKEIDLYSTN
Sbjct: 62 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLRGVWAKEIDLYSTN 110
>gi|198429489|ref|XP_002131370.1| PREDICTED: similar to RAB18, member RAS oncogene family isoform 2
[Ciona intestinalis]
gi|198429491|ref|XP_002131333.1| PREDICTED: similar to RAB18, member RAS oncogene family isoform 1
[Ciona intestinalis]
Length = 200
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/169 (64%), Positives = 134/169 (79%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IGDSGVGKSSLLL FT D F+ + S TIGVDFKVK + V G +KLAIWDTAGQE
Sbjct: 9 LKILIIGDSGVGKSSLLLRFTDDRFDPDQSATIGVDFKVKSLTVEGNTVKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I VYD TR+D+F++LS W E++ YST + +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVIFVYDCTRKDSFSHLS-TWLTEVETYSTKPNIVKMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ RVVT++EG+ FAR++ LFIE SAKTR V+ FEELV KI+ TP L
Sbjct: 128 N-RVVTREEGLKFARKHSMLFIEASAKTRDGVECAFEELVEKIIQTPGL 175
>gi|225711468|gb|ACO11580.1| Ras-related protein Rab-18 [Caligus rogercresseyi]
Length = 211
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 130/169 (76%), Gaps = 2/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
KLL+IG+SGVGKSSLLL FT D F+ E S TIGVDFKVK + V G ++KLAIWDTAGQE
Sbjct: 10 LKLLIIGESGVGKSSLLLRFTEDAFDPEHSATIGVDFKVKTITVQGNRVKLAIWDTAGQE 69
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRG QG I+VYDVT R++F+N+ + W E+D Y+TN D +K+LVGNK D E
Sbjct: 70 RFRTLTPSYYRGGQGAILVYDVTSRESFSNVEN-WLNELDTYTTNHDIVKMLVGNKCDLE 128
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+RVV+K+EG AR++ +FIE SAKTR VQ FEELV I+ TP L
Sbjct: 129 DKRVVSKEEGQKCARKHRMMFIEASAKTREGVQLAFEELVENIIQTPEL 177
>gi|30841008|ref|NP_851415.1| ras-related protein Rab-18 [Mus musculus]
gi|1710017|sp|P35293.2|RAB18_MOUSE RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|388325|gb|AAC37632.1| Rab18 [Mus musculus]
gi|515041|emb|CAA56583.1| rab18 [Mus musculus]
gi|26337433|dbj|BAC32402.1| unnamed protein product [Mus musculus]
gi|33604086|gb|AAH56351.1| RAB18, member RAS oncogene family [Mus musculus]
gi|74138639|dbj|BAE27140.1| unnamed protein product [Mus musculus]
gi|74150708|dbj|BAE25489.1| unnamed protein product [Mus musculus]
gi|74183892|dbj|BAE24512.1| unnamed protein product [Mus musculus]
gi|74191971|dbj|BAE32926.1| unnamed protein product [Mus musculus]
gi|74222309|dbj|BAE26955.1| unnamed protein product [Mus musculus]
gi|112292993|dbj|BAF02874.1| Rab18 [Mus musculus]
gi|148691081|gb|EDL23028.1| RAB18, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 206
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 137/197 (69%), Gaps = 3/197 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L ++
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVK 186
Query: 194 IFKQKPPEADAAASGCC 210
+ ++ A G C
Sbjct: 187 LSHREESRGGGACGGYC 203
>gi|410924888|ref|XP_003975913.1| PREDICTED: ras-related protein Rab-18-B-like [Takifugu rubripes]
Length = 205
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 134/176 (76%), Gaps = 3/176 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
KLL+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + + G + KLAIWDTAGQE
Sbjct: 9 LKLLIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTLAIDGNRAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDV+RRDTF L + W E++ Y+T D +K+LVGNK+DK+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVSRRDTFVKLEN-WLNELETYTTRMDLVKMLVGNKIDKD 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
+R V + EG+ FAR++ LFIE SAKT+ VQ FEELV KIL TP L + G
Sbjct: 128 -DREVDRNEGLKFARKHSMLFIEASAKTKDGVQCAFEELVEKILQTPGLWESDNTG 182
>gi|348565773|ref|XP_003468677.1| PREDICTED: ras-related protein Rab-18-like [Cavia porcellus]
Length = 206
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 136/197 (69%), Gaps = 3/197 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L ++
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVK 186
Query: 194 IFKQKPPEADAAASGCC 210
+ + A G C
Sbjct: 187 LSHMEESHGGGACGGYC 203
>gi|60223069|ref|NP_001012486.1| ras-related protein Rab-18 [Rattus norvegicus]
gi|81909560|sp|Q5EB77.1|RAB18_RAT RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|59808259|gb|AAH89957.1| RAB18, member RAS oncogene family [Rattus norvegicus]
Length = 206
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 137/197 (69%), Gaps = 3/197 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L ++
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVK 186
Query: 194 IFKQKPPEADAAASGCC 210
+ ++ A G C
Sbjct: 187 LSPREESHGGGACGGYC 203
>gi|149634680|ref|XP_001506607.1| PREDICTED: ras-related protein Rab-18-like [Ornithorhynchus
anatinus]
Length = 206
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 111/169 (65%), Positives = 130/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|327271994|ref|XP_003220771.1| PREDICTED: ras-related protein Rab-18-like [Anolis carolinensis]
Length = 205
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 111/169 (65%), Positives = 130/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFAKL-DNWLTELETYCTRNDIVKMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|224044745|ref|XP_002187766.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Taeniopygia
guttata]
Length = 207
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 130/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D +++LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVQMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|395827177|ref|XP_003786782.1| PREDICTED: ras-related protein Rab-18 [Otolemur garnettii]
Length = 206
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 129/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|302828392|ref|XP_002945763.1| RabC/Rab18 [Volvox carteri f. nagariensis]
gi|300268578|gb|EFJ52758.1| RabC/Rab18 [Volvox carteri f. nagariensis]
Length = 212
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/182 (54%), Positives = 136/182 (74%), Gaps = 1/182 (0%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKL 64
A+ D+ K+L++GDSGVGK+SLL F D+F+E ++ TIGVDF VK + V K++KL
Sbjct: 7 ATDSVIDFTIKILLLGDSGVGKTSLLTRFAHDSFDEKVASTIGVDFAVKKLSVYDKRVKL 66
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
+WDTAGQE+FRTLTS++YRGA+GII+VYDV+R DT +L + W +E++LY T D +++
Sbjct: 67 TVWDTAGQEKFRTLTSTFYRGAKGIILVYDVSRPDTLRHLEEQWMRELELYGTEADAVRM 126
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
+V NKVD R V+ EG +FAR +GCLF+E SAKT + V FEELVLKIL+TPSLL
Sbjct: 127 VVANKVDVGDARRVSWHEGSDFARRHGCLFVETSAKTNIAVANAFEELVLKILETPSLLE 186
Query: 185 EG 186
+
Sbjct: 187 DA 188
>gi|387017928|gb|AFJ51082.1| ras-related protein Rab-18-like [Crotalus adamanteus]
Length = 205
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/169 (65%), Positives = 131/169 (77%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT + F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDNTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTFT L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFTKL-DNWLTELETYCTRYDIVKMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|149028369|gb|EDL83766.1| rCG40811, isoform CRA_b [Rattus norvegicus]
Length = 206
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/199 (58%), Positives = 139/199 (69%), Gaps = 11/199 (5%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL--AEGSKGLK 191
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L +KG+K
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVK 186
Query: 192 KNIFKQKPPEADAAASGCC 210
+ P + G C
Sbjct: 187 LS------PREECHGGGAC 199
>gi|335775453|gb|AEH58577.1| Ras-related protein Rab-18-like protein [Equus caballus]
Length = 206
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 129/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|344277582|ref|XP_003410579.1| PREDICTED: ras-related protein Rab-18-like [Loxodonta africana]
Length = 206
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 129/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFLKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|10880989|ref|NP_067075.1| ras-related protein Rab-18 isoform 1 [Homo sapiens]
gi|197102556|ref|NP_001127616.1| ras-related protein Rab-18 [Pongo abelii]
gi|388452921|ref|NP_001253719.1| RAB18, member RAS oncogene family [Macaca mulatta]
gi|332240536|ref|XP_003269443.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Nomascus
leucogenys]
gi|332833815|ref|XP_003312545.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Pan troglodytes]
gi|397501611|ref|XP_003821474.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Pan paniscus]
gi|397501613|ref|XP_003821475.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Pan paniscus]
gi|402879861|ref|XP_003903543.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Papio anubis]
gi|403295005|ref|XP_003938447.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Saimiri
boliviensis boliviensis]
gi|410043688|ref|XP_003951660.1| PREDICTED: ras-related protein Rab-18 [Pan troglodytes]
gi|426364298|ref|XP_004049255.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Gorilla gorilla
gorilla]
gi|12230528|sp|Q9NP72.1|RAB18_HUMAN RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|75070476|sp|Q5R5H5.1|RAB18_PONAB RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|7381201|gb|AAF61433.1|AF137372_1 ras-related protein RAB18 [Homo sapiens]
gi|12239330|gb|AAG49435.1|AF136974_1 ras-related protein 18 [Homo sapiens]
gi|20379076|gb|AAM21098.1|AF498950_1 small GTP binding protein RAB18 [Homo sapiens]
gi|33150584|gb|AAP97170.1|AF087860_1 rab18 [Homo sapiens]
gi|7531023|emb|CAB86486.1| ras-related small GTPase RAB18 [Homo sapiens]
gi|12052987|emb|CAB66668.1| hypothetical protein [Homo sapiens]
gi|15929113|gb|AAH15014.1| RAB18, member RAS oncogene family [Homo sapiens]
gi|20809384|gb|AAH29350.1| RAB18, member RAS oncogene family [Homo sapiens]
gi|32880023|gb|AAP88842.1| RAB18, member RAS oncogene family [Homo sapiens]
gi|49065336|emb|CAG38486.1| RAB18 [Homo sapiens]
gi|55732582|emb|CAH92991.1| hypothetical protein [Pongo abelii]
gi|61360907|gb|AAX41949.1| RAB18 member RAS oncogene family [synthetic construct]
gi|61360911|gb|AAX41950.1| RAB18 member RAS oncogene family [synthetic construct]
gi|90076230|dbj|BAE87795.1| unnamed protein product [Macaca fascicularis]
gi|90086345|dbj|BAE91725.1| unnamed protein product [Macaca fascicularis]
gi|117645108|emb|CAL38020.1| hypothetical protein [synthetic construct]
gi|119606460|gb|EAW86054.1| RAB18, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119606461|gb|EAW86055.1| RAB18, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|193786050|dbj|BAG50939.1| unnamed protein product [Homo sapiens]
gi|208967232|dbj|BAG73630.1| RAB18, member RAS oncogene family [synthetic construct]
gi|380810740|gb|AFE77245.1| ras-related protein Rab-18 [Macaca mulatta]
gi|383411947|gb|AFH29187.1| ras-related protein Rab-18 [Macaca mulatta]
gi|384945898|gb|AFI36554.1| ras-related protein Rab-18 [Macaca mulatta]
gi|410209604|gb|JAA02021.1| RAB18, member RAS oncogene family [Pan troglodytes]
gi|410260764|gb|JAA18348.1| RAB18, member RAS oncogene family [Pan troglodytes]
gi|410305300|gb|JAA31250.1| RAB18, member RAS oncogene family [Pan troglodytes]
gi|410332701|gb|JAA35297.1| RAB18, member RAS oncogene family [Pan troglodytes]
Length = 206
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 129/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|115495023|ref|NP_001068967.1| ras-related protein Rab-18 [Bos taurus]
gi|335296519|ref|XP_003357800.1| PREDICTED: ras-related protein Rab-18-like [Sus scrofa]
gi|426240891|ref|XP_004014327.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Ovis aries]
gi|122142144|sp|Q0IIG8.1|RAB18_BOVIN RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|113911817|gb|AAI22651.1| RAB18, member RAS oncogene family [Bos taurus]
gi|296481383|tpg|DAA23498.1| TPA: ras-related protein Rab-18 [Bos taurus]
gi|385281370|gb|AFI57837.1| ras-related protein Rab-18 [Capra hircus]
Length = 206
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 129/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|301788416|ref|XP_002929624.1| PREDICTED: ras-related protein Rab-18-like [Ailuropoda melanoleuca]
Length = 206
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 129/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|317419712|emb|CBN81748.1| Ras-related protein Rab-18 [Dicentrarchus labrax]
Length = 204
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 131/176 (74%), Gaps = 3/176 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ E + TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPEQAATIGVDFKVKTITVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRR+TF L D W E++ Y T D +K+LVGNK+D+E
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRETFAKL-DNWLNELETYCTRNDLVKMLVGNKIDRE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
+ + + EG+ FAR++ LFIE SAKTR VQ FEELV KI+ TP L S G
Sbjct: 128 NHE-LDRAEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWQSESHG 182
>gi|410963376|ref|XP_003988241.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Felis catus]
Length = 206
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 129/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|355714854|gb|AES05139.1| RAB18, member RAS oncoprotein family [Mustela putorius furo]
Length = 205
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 129/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|417397093|gb|JAA45580.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 206
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 129/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRSEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|296206366|ref|XP_002750219.1| PREDICTED: uncharacterized protein LOC100402013 isoform 1
[Callithrix jacchus]
Length = 206
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 128/169 (75%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKFLIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|290997916|ref|XP_002681527.1| rab family small GTPase [Naegleria gruberi]
gi|284095151|gb|EFC48783.1| rab family small GTPase [Naegleria gruberi]
Length = 197
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 147/199 (73%), Gaps = 10/199 (5%)
Query: 19 MIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRT 77
++GDS GKSS++ FT D F E++SPTIGVDFKVK+++V KK+KL I+DTAGQERFRT
Sbjct: 1 LVGDSATGKSSIITQFTEDEFKEQMSPTIGVDFKVKFMNVNRKKVKLTIFDTAGQERFRT 60
Query: 78 LTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERV 137
LTSSYYR A GII+VYDVTR +TF N+ + W KE DLYST ++C+KLL+GNK+D + ER
Sbjct: 61 LTSSYYRNAHGIILVYDVTREETFNNIKN-WLKECDLYSTFEECVKLLIGNKIDLKEERK 119
Query: 138 VTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKK----- 192
V+ ++ NFA+ ++IE SAKT+ NV + FEE+V +IL+T +LL E ++ ++
Sbjct: 120 VSLQDAQNFAKSNNMVYIETSAKTKENVDKAFEEVVYQILNTTNLL-ESTEPVRNKPTDN 178
Query: 193 -NIFKQKPPEADAAASGCC 210
NI +P E++ SGCC
Sbjct: 179 VNISTSEPNESE-GGSGCC 196
>gi|47225130|emb|CAF98757.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 131/176 (74%), Gaps = 3/176 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ + + TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPDQAATIGVDFKVKTLTVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRR+TFT L D W E++ Y T D +K+LVGNK+D+E
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRETFTKL-DNWLNELETYCTRNDLVKMLVGNKIDRE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
+ V K EG+ FAR++ LFIE SAKTR VQ FEELV KI+ TP L G
Sbjct: 128 NHE-VEKPEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKIIQTPGLWQSEKHG 182
>gi|62897867|dbj|BAD96873.1| RAB18, member RAS oncogene family variant [Homo sapiens]
Length = 206
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/169 (64%), Positives = 129/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLA+WDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLALWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|405970601|gb|EKC35494.1| Ras-related protein Rab-18-B [Crassostrea gigas]
Length = 203
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/197 (56%), Positives = 142/197 (72%), Gaps = 7/197 (3%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+S VGKSSLLL FT D F+ E + TIGVDFKVK + V G + KLAIWDTAGQE
Sbjct: 10 LKILIIGESSVGKSSLLLRFTDDTFDPEQAATIGVDFKVKTLQVDGNRAKLAIWDTAGQE 69
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG I+VYDVT R +F L DVW E++ +ST D IK+LVGNK+D+E
Sbjct: 70 RFRTLTPSYYRGAQGAILVYDVTNRASFQKL-DVWLNELETFSTKHDLIKMLVGNKIDQE 128
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+ R V+K++G+ FAR++ LFIE SAKTR VQ FEELV KI+ TP L ++G+ +
Sbjct: 129 N-REVSKEDGLKFARKHHMLFIEASAKTREGVQCAFEELVEKIIQTPGLWETSNRGVDIS 187
Query: 194 IFKQKPPEADAAASGCC 210
+ +A +A G C
Sbjct: 188 ----QGGQAASACQGYC 200
>gi|45592944|ref|NP_996661.1| RAB18A, member RAS oncogene family [Danio rerio]
gi|40807131|gb|AAH65318.1| RAB18A, member RAS oncogene family [Danio rerio]
gi|157422871|gb|AAI53661.1| RAB18A, member RAS oncogene family [Danio rerio]
Length = 205
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 131/169 (77%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ E+ TIGVDFKVK + V G + KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDAEIGATIGVDFKVKTLAVDGNRAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDV+RR+TF L D W E++ Y T D +K+LVGNK+DK+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVSRRETFAKL-DNWLSELETYCTRNDLVKMLVGNKIDKD 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+R + ++EG+ FAR++ LFIE SAKTR VQ FEELV KIL TP L
Sbjct: 128 -DREIEREEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKILQTPGL 175
>gi|340375152|ref|XP_003386101.1| PREDICTED: ras-related protein Rab-18-B-like [Amphimedon
queenslandica]
Length = 201
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 134/177 (75%), Gaps = 3/177 (1%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
D K+L+IGDSGVGKSSLLL F ++ F+ + + TIGVDFKVK V + GK++KLAIWDTA
Sbjct: 3 DVSLKILIIGDSGVGKSSLLLRFVNNTFDPDQASTIGVDFKVKTVQLAGKRVKLAIWDTA 62
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRTLT +YYRGAQG+I+VYDV DTF L +VW E+D Y+T +D +K+LVGNK+
Sbjct: 63 GQERFRTLTPAYYRGAQGVILVYDVCLPDTFEGL-EVWLNELDTYATKKDLVKMLVGNKI 121
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
DK +ER +++ +G+ FAR LFIE SAKTR VQ+ FEELV KIL P L E +
Sbjct: 122 DK-TERKISRADGLQFARRNSMLFIESSAKTRDGVQEAFEELVQKILQNPDLYTENT 177
>gi|83753568|pdb|1X3S|A Chain A, Crystal Structure Of Human Rab18 In Complex With Gppnhp
Length = 195
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 128/169 (75%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 16 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 75
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + LVGNK+DKE
Sbjct: 76 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNXLVGNKIDKE 134
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 135 N-REVDRNEGLKFARKHSXLFIEASAKTCDGVQCAFEELVEKIIQTPGL 182
>gi|410933133|ref|XP_003979946.1| PREDICTED: ras-related protein Rab-18-like isoform 1 [Takifugu
rubripes]
Length = 204
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 132/176 (75%), Gaps = 3/176 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ + + TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPDQAATIGVDFKVKTITVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTR++TFT L D W E++ Y T D +K+LVGNK+D+E
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRQETFTKL-DNWLNELETYCTRNDLVKMLVGNKIDRE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
+ R V + EG+ FAR++ LFIE SAKTR VQ FEELV KI+ TP L G
Sbjct: 128 N-REVERPEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKIIQTPGLWQSEKHG 182
>gi|221127104|ref|XP_002163996.1| PREDICTED: ras-related protein Rab-18-like [Hydra magnipapillata]
Length = 204
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 134/175 (76%), Gaps = 3/175 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLL+ FT D F++ + TIGVDFKVK V+V G ++KLA+WDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLIRFTDDTFDQDIGATIGVDFKVKTVEVDGNRMKLALWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDV+ R TF L+D W E + Y+T QD +K+LVGNK+DK
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVSVRQTFDKLND-WLNECETYATKQDIVKMLVGNKIDKP 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
R VT++EG+ FAR + LFIE SAKT+ V+ FEELV KIL TP L + SK
Sbjct: 128 G-RQVTRQEGLQFARRHSMLFIEASAKTKDGVECAFEELVEKILQTPGLWEKESK 181
>gi|443683130|gb|ELT87498.1| hypothetical protein CAPTEDRAFT_21334 [Capitella teleta]
gi|443728770|gb|ELU14963.1| hypothetical protein CAPTEDRAFT_21450 [Capitella teleta]
Length = 204
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 114/196 (58%), Positives = 137/196 (69%), Gaps = 9/196 (4%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
KLL+IG++GVGKSSLLL FT D F+ E S TIGVDFKVK + V G + KLAIWDTAGQE
Sbjct: 10 LKLLIIGETGVGKSSLLLRFTDDTFDPEQSATIGVDFKVKTIQVDGNRAKLAIWDTAGQE 69
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG I+VYDV + +F L D W E++ +ST D +K+LVGNK+DKE
Sbjct: 70 RFRTLTPSYYRGAQGCILVYDVCSQASFAKL-DNWLNELETFSTKHDIVKMLVGNKIDKE 128
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
R V+++EG+ FAR Y LFIE SAKT+ VQ FEELV KIL TP L +GL
Sbjct: 129 P-REVSREEGLKFARRYHMLFIEASAKTKEGVQCAFEELVEKILQTPGLWETDQRGLSIG 187
Query: 194 IFKQKPPEADAAASGC 209
Q +AA+GC
Sbjct: 188 RNDQ------SAAAGC 197
>gi|290561625|gb|ADD38212.1| Ras-related protein Rab-18-B [Lepeophtheirus salmonis]
Length = 204
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 129/169 (76%), Gaps = 2/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
KLL+IG+SGVGKSSLLL FT D F+ + S TIGVDFKVK + V G ++KLAIWDTAGQE
Sbjct: 10 LKLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTAGQE 69
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRG QG I+VYDVT RD+F+N+ + W E+D Y+TN D +K+LVGNK D E
Sbjct: 70 RFRTLTPSYYRGGQGAILVYDVTNRDSFSNVEN-WLNELDTYATNHDIVKMLVGNKCDLE 128
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+R ++K+EG AR++ +FIE SAKTR VQ FEELV I+ TP L
Sbjct: 129 EKRAISKEEGQKCARKHRMMFIESSAKTREGVQLAFEELVENIIQTPEL 177
>gi|225712132|gb|ACO11912.1| Ras-related protein Rab-18 [Lepeophtheirus salmonis]
gi|290462753|gb|ADD24424.1| Ras-related protein Rab-18-B [Lepeophtheirus salmonis]
Length = 204
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 129/169 (76%), Gaps = 2/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
KLL+IG+SGVGKSSLLL FT D F+ + S TIGVDFKVK + V G ++KLAIWDTAGQE
Sbjct: 10 LKLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTAGQE 69
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRG QG I+VYDVT RD+F+N+ + W E+D Y+TN D +K+LVGNK D E
Sbjct: 70 RFRTLTPSYYRGGQGAILVYDVTNRDSFSNVEN-WLNELDTYATNHDIVKMLVGNKCDLE 128
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+R ++K+EG AR++ +FIE SAKTR VQ FEELV I+ TP L
Sbjct: 129 EKRAISKEEGQKCARKHRMMFIESSAKTREGVQLAFEELVENIIQTPEL 177
>gi|156388137|ref|XP_001634558.1| predicted protein [Nematostella vectensis]
gi|156221642|gb|EDO42495.1| predicted protein [Nematostella vectensis]
Length = 204
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/198 (55%), Positives = 139/198 (70%), Gaps = 7/198 (3%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L++G+SGVGKSSLLL FT D F+ ++ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYD R+TF L + W E+++YST +D +K+LVGNK+DK
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDTNSRETFDKLEE-WLNEVEMYSTKKDIVKMLVGNKIDK- 126
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA-EGSKGLKK 192
+ R V +K+G+ FAR + LFIE SA+T+ VQ FEELV KI+ TP L E S G++
Sbjct: 127 NNREVDRKQGLQFARRHSMLFIEASARTKEGVQLAFEELVEKIIQTPGLWENEKSSGMR- 185
Query: 193 NIFKQKPPEADAAASGCC 210
P+ SG C
Sbjct: 186 --LTSGGPQTVEGCSGYC 201
>gi|324523684|gb|ADY48284.1| Ras-related protein Rab-18 [Ascaris suum]
Length = 200
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 134/196 (68%), Gaps = 8/196 (4%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSL+L F D F+ E+S TIGVDF+V V G ++KLAIWDTAGQE
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDTFDPEISATIGVDFRVTSRTVDGNRVKLAIWDTAGQE 71
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I VYDVT R +F L D W E+D YST + IK+LVGNK+DK
Sbjct: 72 RFRTLTPSYYRGAQGVICVYDVTNRCSFERL-DHWMNEVDTYSTKNNAIKMLVGNKIDKT 130
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
S RV+T++EG+ FA+ + LFIE SAKTR VQ FEEL+ K++ TP L G
Sbjct: 131 S-RVITREEGLQFAKRHRMLFIEASAKTREGVQCAFEELIEKVIQTPGLWESDRSGFALG 189
Query: 194 IFKQKPPEADAAASGC 209
Q DA GC
Sbjct: 190 TANQ-----DAGTCGC 200
>gi|149016250|gb|EDL75496.1| rCG62892 [Rattus norvegicus]
Length = 206
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/169 (63%), Positives = 128/169 (75%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG SGVGKSSLLL FT + F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGKSGVGKSSLLLRFTDNTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L + W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLYN-WLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|406695666|gb|EKC98968.1| putative Ras-related protein Rab-18 [Trichosporon asahii var.
asahii CBS 8904]
Length = 222
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/212 (54%), Positives = 146/212 (68%), Gaps = 21/212 (9%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAG 71
KLL+IG+S VGKSSLLL FT D+F EE + TIGVDFKVK V+V G++ KL+IWDTAG
Sbjct: 13 LKLLLIGNSSVGKSSLLLRFTDDDFLSEEETAATIGVDFKVKSVEVDGRRYKLSIWDTAG 72
Query: 72 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVD 131
QERFRTLTSSYYRGAQG+I+VYDV++R+TF L W +EI+ Y +D +K++VGNKVD
Sbjct: 73 QERFRTLTSSYYRGAQGVILVYDVSQRNTFDELIK-WFREIETYCA-EDVVKIIVGNKVD 130
Query: 132 K-------------ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
K E R VT +EG FA G LF+ECSAKTRV V F+ELV +IL+
Sbjct: 131 KVTLVAMRRADESQEFTRQVTTEEGQAFADRMGTLFMECSAKTRVGVNDAFQELVRRILE 190
Query: 179 TPSLLAEGSKGLK-KNIFKQKPPEADAAASGC 209
TPSL G + ++ N+ Q+ +A SGC
Sbjct: 191 TPSLWTRGPQPVRTPNVQLQE--DAPGYLSGC 220
>gi|401885802|gb|EJT49887.1| putative Ras-related protein Rab-18 [Trichosporon asahii var.
asahii CBS 2479]
Length = 222
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/212 (55%), Positives = 145/212 (68%), Gaps = 21/212 (9%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAG 71
KLL+IG+S VGKSSLLL FT D+F EE + TIGVDFKVK V+V G++ KL+IWDTAG
Sbjct: 13 LKLLLIGNSSVGKSSLLLRFTDDDFLSEEETAATIGVDFKVKSVEVDGRRYKLSIWDTAG 72
Query: 72 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVD 131
QERFRTLTSSYYRGAQG+I+VYDVT+R+TF L W +EID Y +D +K++VGNKVD
Sbjct: 73 QERFRTLTSSYYRGAQGVILVYDVTQRNTFDELIK-WFREIDTYCA-EDVVKIIVGNKVD 130
Query: 132 K-------------ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
K E R VT +EG FA G LF+ECSAKTRV V F+ LV +IL+
Sbjct: 131 KVTLVAIRRADESQEFTRQVTTEEGQAFADRMGTLFMECSAKTRVGVNDAFQVLVRRILE 190
Query: 179 TPSLLAEGSKGLK-KNIFKQKPPEADAAASGC 209
TPSL G + ++ N+ Q+ +A SGC
Sbjct: 191 TPSLWTRGPQPVRTPNVQLQE--DAPGYLSGC 220
>gi|118102871|ref|XP_423284.2| PREDICTED: ras-related protein Rab-18-B-like [Gallus gallus]
Length = 204
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 131/174 (75%), Gaps = 3/174 (1%)
Query: 16 KLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQER 74
KL++IGDS VGKSSLLL F +FE L PTI VDFKVK + V G ++LAIWDTAGQER
Sbjct: 9 KLILIGDSAVGKSSLLLRFAEGSFEPSLKPTICVDFKVKKMVVDGHTVQLAIWDTAGQER 68
Query: 75 FRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKES 134
FRTL SYYRG QGI++VYDVTR+DTFT L D W E+++Y+T + +K+LVGNK DK
Sbjct: 69 FRTLNPSYYRGTQGIVLVYDVTRKDTFTGL-DSWLNELEIYNTKSNTVKMLVGNKTDK-P 126
Query: 135 ERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
+R V ++EG+ FA++ LFIE SAKT VQ FEELV+KIL TP+LL + +K
Sbjct: 127 DREVERREGLQFAKKRSLLFIETSAKTEDGVQHAFEELVIKILQTPNLLDKSTK 180
>gi|159479896|ref|XP_001698022.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158273821|gb|EDO99607.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 210
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 136/192 (70%), Gaps = 2/192 (1%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
D K+L++GDSGVGK+ LL F D+F++ ++ TIGVDF VK + V K++KL +WDTA
Sbjct: 11 DLTLKILLLGDSGVGKTCLLTRFAHDSFDDKVASTIGVDFAVKRMSVYDKRVKLTVWDTA 70
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQE+FRTLTS++YRGA+GII+VYDV+R DT +L + W +E+++Y T D ++++V NKV
Sbjct: 71 GQEKFRTLTSTFYRGAKGIILVYDVSRPDTLRHLEEQWMRELEMYGTESDAVRMVVANKV 130
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D R V+ EG +FAR +GCLF+E SAKT V V FEELVLKIL+TPSLL E G
Sbjct: 131 DVGEARRVSWHEGSDFARRHGCLFVETSAKTNVAVANAFEELVLKILETPSLL-EDVGGA 189
Query: 191 KKNIFKQKPPEA 202
+ P A
Sbjct: 190 GAGTVRLDAPAA 201
>gi|260794026|ref|XP_002592011.1| hypothetical protein BRAFLDRAFT_122387 [Branchiostoma floridae]
gi|229277224|gb|EEN48022.1| hypothetical protein BRAFLDRAFT_122387 [Branchiostoma floridae]
Length = 213
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 107/182 (58%), Positives = 134/182 (73%), Gaps = 9/182 (4%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ E++ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPEIAATIGVDFKVKTLTVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDV+ R++F L + W E++ +ST QD +K+LVGNK+DK
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVSSRNSFNRL-EQWLSELETFSTKQDIVKMLVGNKIDKA 127
Query: 134 S-------ERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG 186
S ++ V + EG+ FAR++ LFIE SAKTR VQ FEELV KI+ TP L
Sbjct: 128 STLSSVQDKKEVDRNEGLKFARKHQMLFIEASAKTREGVQCAFEELVEKIIQTPGLWESD 187
Query: 187 SK 188
S+
Sbjct: 188 SQ 189
>gi|296531381|ref|NP_001171837.1| ras-related protein Rab-18-like [Saccoglossus kowalevskii]
Length = 207
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 131/176 (74%), Gaps = 3/176 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ P TIGVDFKVK + V G KLAIWDTAGQE
Sbjct: 11 LKILIIGESGVGKSSLLLRFTDDTFDPEQPATIGVDFKVKTLSVEGNTTKLAIWDTAGQE 70
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDV+ R +F L D+W E++ +ST D +K+LVGNK+D +
Sbjct: 71 RFRTLTPSYYRGAQGVILVYDVSNRKSFQKL-DMWLNELETFSTKSDIVKMLVGNKIDMD 129
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
+R V ++EG+ FAR++ LFIE SAKT+ VQ FEELV K++ TP L S+G
Sbjct: 130 -KREVDRQEGLKFARKHAMLFIEASAKTKEGVQVAFEELVEKVIQTPGLWENDSRG 184
>gi|225719394|gb|ACO15543.1| Ras-related protein Rab-18 [Caligus clemensi]
Length = 212
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 129/175 (73%), Gaps = 2/175 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
KLL+IG+S VGKSSL L FT D F+ E S TIGVDFKVK + V G ++KLAIWDTAGQE
Sbjct: 12 LKLLIIGESCVGKSSLQLRFTEDAFDPEHSATIGVDFKVKTITVQGNRVKLAIWDTAGQE 71
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRG QG I+VYDVT RD+F+N+ + W E+D Y+T D +K+LVGNK D E
Sbjct: 72 RFRTLTPSYYRGGQGAILVYDVTNRDSFSNVEN-WLNELDTYATIHDIVKMLVGNKCDLE 130
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
+RV++K+EG AR++ +FIE SAKTR VQ FEELV I+ TP L S+
Sbjct: 131 EKRVISKEEGQKCARKHRMMFIEASAKTREGVQLAFEELVENIIQTPELWEASSR 185
>gi|327275917|ref|XP_003222718.1| PREDICTED: ras-related protein Rab-18-B-like [Anolis carolinensis]
Length = 212
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 133/178 (74%), Gaps = 4/178 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFEEL-SPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
KLL+IGDSGVGKSSLLL FT D FE PTIGVDFK+K V VG L++AIWDTAGQE
Sbjct: 17 LKLLLIGDSGVGKSSLLLRFTEDQFEPYRKPTIGVDFKIKKVIVGDLPLQVAIWDTAGQE 76
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQGII+VYDVTRR+TF L + W +E++++ T ++ +K+LVGNK+D E
Sbjct: 77 RFRTLTPSYYRGAQGIILVYDVTRRETFLGL-ESWLQELEVF-TKKEVVKILVGNKID-E 133
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLK 191
+ V ++EG+ FAR + LF E SAK + VQ F+E+V++IL TP L +GL+
Sbjct: 134 TRHEVERREGLRFARRHSLLFAEASAKMKYGVQNIFDEVVIRILQTPGLWNIKRQGLR 191
>gi|328770926|gb|EGF80967.1| hypothetical protein BATDEDRAFT_11061 [Batrachochytrium
dendrobatidis JAM81]
Length = 227
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 144/214 (67%), Gaps = 8/214 (3%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGK 60
++ S ++ FKLL+IGDSG GKSSLLL FT D + +E+S TIGVDFKVK +D+ K
Sbjct: 15 TTVSDRDIVSTFKLLLIGDSGTGKSSLLLQFTDDLWLQPDEVSATIGVDFKVKVIDIDSK 74
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLY-STNQ 119
K KL IWDTAGQERFRTLTSSYYRGAQG+I+VYDV+ R +F +L W E+D Y S+N
Sbjct: 75 KYKLTIWDTAGQERFRTLTSSYYRGAQGVILVYDVSNRGSFDHLQ-TWFNELDTYTSSNN 133
Query: 120 DCIKLLVGNKVDKESE--RVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
+K++VGNK DK+ R V +KEG FA++ G LFIE SAKT + V+ F E+V +I+
Sbjct: 134 SVVKIIVGNKSDKDVSGGREVPRKEGEAFAKKMGTLFIETSAKTTMGVRDAFVEVVRRII 193
Query: 178 DTPSLLAEGSKGLKK-NIFKQKPPEADAAASGCC 210
DTPSL G + N+ ADA + C
Sbjct: 194 DTPSLWQRNQSGSRTGNVTLAAGTSADAQSYCSC 227
>gi|351712339|gb|EHB15258.1| Ras-related protein Rab-18 [Heterocephalus glaber]
Length = 205
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/197 (56%), Positives = 135/197 (68%), Gaps = 4/197 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+ R V + EG+ FAR++ LFI +AKT VQ FEELV KI+ TP L ++
Sbjct: 128 N-REVDRNEGLKFARKHSMLFI-GNAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVR 185
Query: 194 IFKQKPPEADAAASGCC 210
+ + A G C
Sbjct: 186 LSHMEDSHGRGACGGYC 202
>gi|427787123|gb|JAA59013.1| Putative rab18a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 201
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 125/169 (73%), Gaps = 2/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+S VGKSSLLL FT D F+ L+ TIGVDFKVK + V G K KLAIWDTAG E
Sbjct: 10 LKILIIGESNVGKSSLLLRFTDDVFDPNLAATIGVDFKVKTLTVDGNKAKLAIWDTAGSE 69
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG I+VYDV TF L D W E++ Y T + +K+LVGNK+DK
Sbjct: 70 RFRTLTPSYYRGAQGAILVYDVCNYSTFQKL-DHWLAELETYCTRNNVVKMLVGNKIDKH 128
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
RVVTK++G+N+AR++ LFIE SAKTR VQ FEELV KI+ TP L
Sbjct: 129 ENRVVTKEQGMNYARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGL 177
>gi|241068895|ref|XP_002408522.1| RAB-18, putative [Ixodes scapularis]
gi|215492508|gb|EEC02149.1| RAB-18, putative [Ixodes scapularis]
Length = 201
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/169 (60%), Positives = 127/169 (75%), Gaps = 2/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+S VGKSSLLL FT D F+ L+ TIGVDFKVK V V G K KLAIWDTAG E
Sbjct: 10 LKILIIGESNVGKSSLLLRFTDDVFDPSLAATIGVDFKVKTVTVDGNKAKLAIWDTAGSE 69
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG I+VYDV+ +TF L D W E++ Y T + +K+LVGNK+D+
Sbjct: 70 RFRTLTPSYYRGAQGAILVYDVSNHNTFLKL-DHWLAELETYCTRSNVVKMLVGNKIDRH 128
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
RVV+K++G+N+AR++ LFIE SAKT+ VQ FEELV KI+ TP L
Sbjct: 129 ESRVVSKEQGMNYARKHSMLFIEASAKTKDGVQCAFEELVEKIIQTPGL 177
>gi|353239644|emb|CCA71547.1| probable Ras-related protein Rab-18 [Piriformospora indica DSM
11827]
Length = 218
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 142/210 (67%), Gaps = 18/210 (8%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAG 71
KLL+IG+S VGKSSLL+ FT F +E S TIGVDF+V +++GG+++KL+IWDTAG
Sbjct: 10 LKLLLIGNSSVGKSSLLMRFTDAQFLPEDESSATIGVDFRVCKMEIGGRRVKLSIWDTAG 69
Query: 72 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVD 131
QERFRT+TSSYYRGAQGII+ YD++ R+TF L W E+D Y T +K+LVGNK+D
Sbjct: 70 QERFRTITSSYYRGAQGIIVAYDISNRETFDALPR-WFTELDTYVT-PSVVKMLVGNKLD 127
Query: 132 KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLK 191
KE R V++ EG FA+ GCLF+E SAKT V V++ F+ELV KILDTP L A + +
Sbjct: 128 KEFSRAVSEDEGRKFAQRNGCLFLEASAKTNVGVREAFQELVEKILDTPELWAPAAPRIT 187
Query: 192 KNIFKQKPPEA------------DAAASGC 209
KP ++ D A+SGC
Sbjct: 188 STA-TAKPQQSMPGSIDLSANAQDNASSGC 216
>gi|464565|sp|Q05976.1|RB18A_LYMST RecName: Full=Ras-related protein Rab-18A
gi|288936|emb|CAA51235.1| RAB18a [Lymnaea stagnalis]
Length = 202
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/203 (55%), Positives = 137/203 (67%), Gaps = 6/203 (2%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAI 66
+QE K+L+IG+SGVGKSSLLL FT D F+ E + TIGVDFKVK + V G K KLAI
Sbjct: 3 EQEIITTLKILIIGESGVGKSSLLLRFTEDTFDPEQAATIGVDFKVKTLTVEGNKTKLAI 62
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRTLT SYYRGAQG+I+VYDV+ + +F L D W E++ +ST D +K+LV
Sbjct: 63 WDTAGQERFRTLTPSYYRGAQGVILVYDVSSKQSFNKL-DAWLNELETFSTKHDMVKMLV 121
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG 186
GNK+D+ + VTK EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 122 GNKIDRANHE-VTKDEGLKFARKHHMLFIEASAKTNDGVQCAFEELVEKIIQTPGLWETS 180
Query: 187 SKGLKKNIFKQKPPEADAAASGC 209
SK L PE + C
Sbjct: 181 SKNL---TLSNHGPEGQGQSCYC 200
>gi|329756970|gb|AEC04741.1| rab18 [Oryza sativa]
Length = 246
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 127/171 (74%), Gaps = 1/171 (0%)
Query: 40 EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRD 99
+E+ PT+GVD K K V GKK K IW+ AGQER R SSY RGA +I VYDVT+R+
Sbjct: 4 DEMPPTVGVDCKYKSVRCNGKKRKRTIWEPAGQERCRGGPSSYDRGADAMIAVYDVTKRE 63
Query: 100 TFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSA 159
+ N++DVWAKEI++ +TN++C K+LVGNKVDK ER+VT++EG+ FA+E GCLF+E SA
Sbjct: 64 SVANVADVWAKEIEVLATNKECDKMLVGNKVDKNEERMVTREEGLAFAQEAGCLFLESSA 123
Query: 160 KTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
KTR NV++CFEEL +K +++PSLL EGS K+N KQK E A GCC
Sbjct: 124 KTRENVEKCFEELAVKYVESPSLLEEGSSVCKRNALKQK-HENKAKNGGCC 173
>gi|321457240|gb|EFX68330.1| hypothetical protein DAPPUDRAFT_301483 [Daphnia pulex]
Length = 207
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 129/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+ G+SGVGKSSLLL FT D F+ E + TIGVDFKVK +++ G +KLAIWDTAGQE
Sbjct: 9 LKILITGESGVGKSSLLLRFTDDTFDNEQAATIGVDFKVKLINIDGNNVKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYR AQG I+VYDV R +F+ L D W E++ Y+TN + +K+L+GNK+DKE
Sbjct: 69 RFRTLTPSYYRNAQGAILVYDVCSRQSFSRL-DAWFDELETYATNTNIVKMLIGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
R V+++EG+ FA+++ LFIE SAKT+ VQ FEELV KI+ TP L
Sbjct: 128 -RREVSREEGLKFAKKHSMLFIEASAKTKDGVQMAFEELVQKIIQTPGL 175
>gi|196001837|ref|XP_002110786.1| hypothetical protein TRIADDRAFT_49948 [Trichoplax adhaerens]
gi|190586737|gb|EDV26790.1| hypothetical protein TRIADDRAFT_49948 [Trichoplax adhaerens]
Length = 205
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/200 (55%), Positives = 141/200 (70%), Gaps = 10/200 (5%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG++GVGKSSLLL FT D F+ E S TIGVDFK+K V+V G ++KLAIWDTAGQE
Sbjct: 8 LKILIIGEAGVGKSSLLLRFTDDQFDPEQSATIGVDFKIKTVNVEGNRVKLAIWDTAGQE 67
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYD ++R +F L + W E+ Y T +D IK+LVGNK+DK+
Sbjct: 68 RFRTLTPSYYRGAQGVILVYDTSKRTSFDKLEN-WLTELRTYCTKRDVIKMLVGNKIDKD 126
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL--AEGSKGLK 191
+R V G NFAR Y LF ECSAKT +VQ F+ELV KI+ TP L + + GLK
Sbjct: 127 -QREVDTLTGTNFARRYQMLFTECSAKTCDHVQDAFDELVHKIIQTPGLWDTEKSNSGLK 185
Query: 192 KNIFKQKPPEADAAA--SGC 209
++ EA A++ GC
Sbjct: 186 ---IGERDGEAKASSCYGGC 202
>gi|312084876|ref|XP_003144454.1| rab family protein 18 [Loa loa]
gi|307760381|gb|EFO19615.1| Ras-like protein Rab-18 [Loa loa]
Length = 200
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/169 (59%), Positives = 126/169 (74%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L++G+SGVGKSSL+L F D F+ E++ TIG+DF+V + V ++KLAIWDTAGQE
Sbjct: 11 LKILIVGESGVGKSSLMLRFVDDTFDPEIAATIGIDFRVTSMMVDQNRVKLAIWDTAGQE 70
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I VYDV+ R TF L W E+D YST D +K+LVGNK+D
Sbjct: 71 RFRTLTPSYYRGAQGVICVYDVSNRQTFEKLGH-WMNEVDTYSTKMDAVKMLVGNKIDM- 128
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
S R VT++EG+ FA++Y LFIE SAKTR VQ FEEL+ KIL TP L
Sbjct: 129 SNREVTREEGLEFAKKYRMLFIEASAKTREGVQCAFEELIEKILQTPGL 177
>gi|325303040|tpg|DAA34577.1| TPA_exp: GTPase Rab18 [Amblyomma variegatum]
Length = 201
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/169 (61%), Positives = 124/169 (73%), Gaps = 2/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+S VGKSSLLL FT D F+ L+ TIGVDFKVK + V G K KLAIWDTAG E
Sbjct: 10 LKILIIGESNVGKSSLLLRFTDDVFDPNLAATIGVDFKVKTLTVDGNKAKLAIWDTAGSE 69
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG I+VYDV TF L D W E++ Y T + +K+LVGNK+DK
Sbjct: 70 RFRTLTPSYYRGAQGAILVYDVCNHSTFQKL-DHWLAELETYCTRNNVVKMLVGNKIDKL 128
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
R VTK++G+N+AR++ LFIE SAKTR VQ FEELV KI+ TP L
Sbjct: 129 ENREVTKEQGMNYARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGL 177
>gi|156094918|ref|XP_001613495.1| small GTPase Rab18 [Plasmodium vivax Sal-1]
gi|148802369|gb|EDL43768.1| small GTPase Rab18, putative [Plasmodium vivax]
Length = 201
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 133/178 (74%), Gaps = 3/178 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
++ ++DYL KLL++GDS VGKSS+L ++ + FEE + TIG+DFKVKY+ + K +K+
Sbjct: 3 NKNKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVG 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRTLTS+YYR A II+VYD T R++F NL DVW EID YSTN++ IK+L
Sbjct: 63 IWDTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKML 121
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
V NK+DK + VTK EG NFA E LF E SAK +N+ CFEEL+ +IL+ PSLL
Sbjct: 122 VANKIDKANHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLL 178
>gi|389582066|dbj|GAB64466.1| small GTPase Rab18 [Plasmodium cynomolgi strain B]
Length = 201
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 133/178 (74%), Gaps = 3/178 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
++ ++DYL KLL++GDS VGKSS+L ++ + FEE + TIG+DFKVKY+ + K +K+
Sbjct: 3 NKNKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVG 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRTLTS+YYR A II+VYD T R++F NL DVW EID YSTN++ IK+L
Sbjct: 63 IWDTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKML 121
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
V NK+DK + VTK EG NFA E LF E SAK +N+ CFEEL+ +IL+ PSLL
Sbjct: 122 VANKIDKANHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLL 178
>gi|221052060|ref|XP_002257606.1| Rab18 GTPase [Plasmodium knowlesi strain H]
gi|193807436|emb|CAQ37942.1| Rab18 GTPase, putative [Plasmodium knowlesi strain H]
Length = 201
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 133/178 (74%), Gaps = 3/178 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
++ ++DYL KLL++GDS VGKSS+L ++ + FEE + TIG+DFKVKY+ + K +K+
Sbjct: 3 NKNKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVG 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRTLTS+YYR A II+VYD T R++F NL DVW EID YSTN++ IK+L
Sbjct: 63 IWDTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKML 121
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
V NK+DK + VTK EG NFA E LF E SAK +N+ CFEEL+ +IL+ PSLL
Sbjct: 122 VANKIDKANHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLL 178
>gi|402587142|gb|EJW81078.1| member Ras oncogene family RAB18A [Wuchereria bancrofti]
Length = 200
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/169 (59%), Positives = 127/169 (75%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSL+L F D F+ E++ TIGVDF+V + V ++KLAIWDTAGQE
Sbjct: 11 LKILIIGESGVGKSSLMLRFVDDTFDPEIAATIGVDFRVTTMMVDQNRVKLAIWDTAGQE 70
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I VYDV+ R TF LS W E+D YST D +K+L+GNK+D
Sbjct: 71 RFRTLTPSYYRGAQGVICVYDVSNRQTFERLSH-WMNEVDTYSTKTDAVKMLIGNKIDI- 128
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
S R VT++EG+ FA+++ LFIE SAKTR VQ FEEL+ K+L TP L
Sbjct: 129 SNREVTREEGLQFAKKHRMLFIEASAKTREGVQCAFEELIEKVLQTPGL 177
>gi|281207535|gb|EFA81718.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 202
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 138/197 (70%), Gaps = 4/197 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
+K+L+IGDS VGK+S++ F D F+E L TIGV+FK+K V+V GK + L IWDTAGQE
Sbjct: 7 YKVLLIGDSDVGKTSIVKRFLDDTFDEDLLCTIGVEFKMKAVEVDGKSVTLCIWDTAGQE 66
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
+FR L SSYYRGA GII+ YDVT+R+TF NL W EI+ +S + +KLLVGNK+DKE
Sbjct: 67 KFRALISSYYRGAHGIILTYDVTKRETFKNLQ-YWLNEIETFSNRANVVKLLVGNKIDKE 125
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+ R VT++EG+ FA+ FIECSAKT++ +QQ FEEL KI++TPS L+E ++ KK
Sbjct: 126 N-REVTREEGLEFAKSKAMFFIECSAKTKIGIQQAFEELAHKIIETPS-LSEDNENKKKK 183
Query: 194 IFKQKPPEADAAASGCC 210
I + G C
Sbjct: 184 IKATVSADESNQQGGYC 200
>gi|124512632|ref|XP_001349449.1| PfRab18, GTPase [Plasmodium falciparum 3D7]
gi|19310063|emb|CAD27350.1| Rab18 GTPase [Plasmodium falciparum]
gi|23499218|emb|CAD51298.1| PfRab18, GTPase [Plasmodium falciparum 3D7]
Length = 201
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 133/178 (74%), Gaps = 3/178 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
++ ++DYL KLL++GDS VGKSS+L ++ + FEE + TIG+DFKVKY+ + K +K+
Sbjct: 3 NKNKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVG 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRTLTS+YYR A II+VYD T R++F NL DVW EID YSTN++ IK+L
Sbjct: 63 IWDTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWINEIDKYSTNKNAIKML 121
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
V NK+DK + VTK EG NFA E LF E SAK +N+ CFEEL+ +IL+ PSLL
Sbjct: 122 VANKIDKPNHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLL 178
>gi|68075529|ref|XP_679683.1| Rab18 GTPase [Plasmodium berghei strain ANKA]
gi|56500482|emb|CAH95262.1| Rab18 GTPase, putative [Plasmodium berghei]
Length = 201
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 133/178 (74%), Gaps = 3/178 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
++ ++DYL KLL++GDS VGKSS+L ++ + FEE + TIG+DFKVKY+ + K +K+
Sbjct: 3 NKNKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVG 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRTLTS+YYR A II+VYD T R++F NL DVW EID YSTN++ IK+L
Sbjct: 63 IWDTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKML 121
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
V NK+DK + VTK EG NFA E LF E SAK +N+ CFEEL+ +IL+ PSLL
Sbjct: 122 VANKIDKPNHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLL 178
>gi|409075969|gb|EKM76344.1| hypothetical protein AGABI1DRAFT_115896 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426192906|gb|EKV42841.1| hypothetical protein AGABI2DRAFT_195613 [Agaricus bisporus var.
bisporus H97]
Length = 220
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 107/196 (54%), Positives = 136/196 (69%), Gaps = 7/196 (3%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDV 57
M ++ + Q + KLL+IG+S VGKSSLLL F+ + + +E S TIGVDF+V ++V
Sbjct: 1 MPPTAPASQPMN--VKLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMEV 58
Query: 58 GGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYST 117
GKK+KL+IWDTAGQERFRT+TSSYYRGAQGII+VYDV+ R+TF L W E++ Y
Sbjct: 59 KGKKIKLSIWDTAGQERFRTITSSYYRGAQGIILVYDVSNRETFEALPR-WYSELETY-V 116
Query: 118 NQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
+ IK+LVGNK+DKE R VT EG FA G LFIE SAKT V V++ F E+V KIL
Sbjct: 117 SSSVIKILVGNKLDKEFSRQVTAAEGQQFAERMGSLFIEASAKTSVGVKEVFTEVVEKIL 176
Query: 178 DTPSLLAEGSKGLKKN 193
+TP L A +K N
Sbjct: 177 ETPELWANSTKHSTSN 192
>gi|328870650|gb|EGG19023.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 201
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 137/197 (69%), Gaps = 6/197 (3%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
+K+L+IGDS VGK+S++ F+ D F+E L TIGV++KVK + V K++ IWDTAGQE
Sbjct: 8 YKILLIGDSDVGKTSIVKRFSDDIFDEDLLCTIGVEYKVKTLKVDDKEVTFNIWDTAGQE 67
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
+FR L SSYYRGA GII+ YDVT+R+TF NL W EI+ +ST + +KLLVGNK+DKE
Sbjct: 68 KFRALISSYYRGAHGIILTYDVTKRETFKNLQ-YWLNEIETFSTRSNVVKLLVGNKIDKE 126
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+ R VT++EG+ FAR LFIECSAKT+V +QQ FEEL KIL+TP E + KK+
Sbjct: 127 N-REVTREEGLEFARSKAMLFIECSAKTKVGIQQAFEELAHKILETPD---EEPQKKKKS 182
Query: 194 IFKQKPPEADAAASGCC 210
+P E D C
Sbjct: 183 TNLVQPDEQDQNMDSYC 199
>gi|391341575|ref|XP_003745104.1| PREDICTED: ras-related protein Rab-18-like [Metaseiulus
occidentalis]
Length = 203
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 139/199 (69%), Gaps = 6/199 (3%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG++ VGKS LLL F D F+ +L+ TIG D K K + V K+KL++WDTAG E
Sbjct: 8 LKVLIIGEADVGKSCLLLRFVEDTFDTQLTSTIGFDHKSKVITVFDNKVKLSLWDTAGSE 67
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT+SYYRGAQG ++VYDVT R++F L D W E++ Y+T+++ +K+LVGNKVDK
Sbjct: 68 RFRTLTASYYRGAQGAVLVYDVTCRESFEKL-DSWLIELETYATHKNIVKMLVGNKVDKH 126
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+R VTK+EGI++AR + LF+E SA+T NV CFEELV KIL TP L + K ++N
Sbjct: 127 EQRQVTKQEGISYARRHQMLFVEASARTSENVTGCFEELVAKILHTPGLWTK--KNDREN 184
Query: 194 IFKQKPPE--ADAAASGCC 210
I P+ D + G C
Sbjct: 185 ITLTDAPDNLGDGSVCGYC 203
>gi|300175138|emb|CBK20449.2| unnamed protein product [Blastocystis hominis]
Length = 202
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 133/204 (65%), Gaps = 6/204 (2%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAI 66
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ VD+ GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGDSGVGKSCLLLRFADDQYSDCYITTIGVDFKIRTVDLDGKTVKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT D+F N+ W EID Y+ N++ +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDLDSFNNVK-TWLHEIDRYA-NENVVKLLV 119
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG 186
GNK D +++VV+ + FA G F+E SAK NV+ F + +I+ + + G
Sbjct: 120 GNKADLTAKKVVSYETAKEFADSLGIEFVETSAKNSTNVETAFMTMAREIMQKNASVQSG 179
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
KG K + P A + GCC
Sbjct: 180 PKGAKPTVV---PSAAKKESKGCC 200
>gi|70947149|ref|XP_743217.1| Rab18 GTPase [Plasmodium chabaudi chabaudi]
gi|56522611|emb|CAH89069.1| Rab18 GTPase, putative [Plasmodium chabaudi chabaudi]
Length = 200
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 133/178 (74%), Gaps = 3/178 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
++ ++DYL KLL++GDS VGKSS+L ++ + FE+ + TIG+DFKVKY+ + K +K+
Sbjct: 3 NKNKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEKKVLSTIGIDFKVKYLKIDNKTIKVG 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRTLTS+YYR A II+VYD T R++F NL DVW EID YSTN++ IK+L
Sbjct: 63 IWDTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKML 121
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
V NK+DK + VTK EG NFA E LF E SAK +N+ CFEEL+ +IL+ PSLL
Sbjct: 122 VANKIDKPNHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLL 178
>gi|426364300|ref|XP_004049256.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Gorilla gorilla
gorilla]
Length = 235
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 134/209 (64%), Gaps = 34/209 (16%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIW------ 67
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIW
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVTLHQQ 68
Query: 68 -----------------------DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL 104
DTAGQERFRTLT SYYRGAQG+I+VYDVTRRDTF L
Sbjct: 69 TANFFLKSQIGNSPILKWAIWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL 128
Query: 105 SDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVN 164
D W E++ Y T D + +LVGNK+DKE+ R V + EG+ FAR++ LFIE SAKT
Sbjct: 129 -DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDG 186
Query: 165 VQQCFEELVLKILDTPSLL--AEGSKGLK 191
VQ FEELV KI+ TP L +KG+K
Sbjct: 187 VQCAFEELVEKIIQTPGLWESENQNKGVK 215
>gi|126326099|ref|XP_001363346.1| PREDICTED: ras-related protein Rab-18-like [Monodelphis domestica]
Length = 208
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 132/197 (67%), Gaps = 5/197 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL T D F+ +S TIGVDFKVK + G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRITDDTFDPNISATIGVDFKVKTISFDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT +YYRGAQG+I+VYDVTRRDTF L D W E++ + D K+LVGNK+DKE
Sbjct: 69 RFRTLTPNYYRGAQGVILVYDVTRRDTFVKL-DNWLIELNTHCMGNDITKMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+ V + EG+ FAR++ LFIE SAKT V+ FEELV KI TP + K KK
Sbjct: 128 NHE-VDRNEGLKFARKHSMLFIEVSAKTCDGVRCAFEELVEKIFQTPGVWE--IKNQKKG 184
Query: 194 IFKQKPPEADAAASGCC 210
+ + E+ G C
Sbjct: 185 VRLSQNEESPGRVCGGC 201
>gi|374081854|ref|NP_001243339.1| ras-related protein Rab-18 isoform 2 [Homo sapiens]
gi|332240538|ref|XP_003269444.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Nomascus
leucogenys]
gi|332833817|ref|XP_507716.2| PREDICTED: ras-related protein Rab-18 isoform 2 [Pan troglodytes]
gi|397501615|ref|XP_003821476.1| PREDICTED: ras-related protein Rab-18 isoform 3 [Pan paniscus]
gi|51599149|gb|AAU08232.1| RAB18 long isoform 1 [Homo sapiens]
Length = 235
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 110/198 (55%), Positives = 129/198 (65%), Gaps = 32/198 (16%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIW------ 67
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIW
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVTLHQQ 68
Query: 68 -----------------------DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL 104
DTAGQERFRTLT SYYRGAQG+I+VYDVTRRDTF L
Sbjct: 69 TANFFLKSQIGNSPILKWAMWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL 128
Query: 105 SDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVN 164
D W E++ Y T D + +LVGNK+DKE+ R V + EG+ FAR++ LFIE SAKT
Sbjct: 129 -DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDG 186
Query: 165 VQQCFEELVLKILDTPSL 182
VQ FEELV KI+ TP L
Sbjct: 187 VQCAFEELVEKIIQTPGL 204
>gi|25151658|ref|NP_741092.1| Protein RAB-18, isoform b [Caenorhabditis elegans]
gi|75017365|sp|Q8MXS1.1|RAB18_CAEEL RecName: Full=Ras-related protein Rab-18
gi|351018339|emb|CCD62283.1| Protein RAB-18, isoform b [Caenorhabditis elegans]
Length = 203
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 127/169 (75%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSL+L F D F+ E + TIGVDF+V + + G ++KLAIWDTAGQE
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQE 71
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I VYDVT R +F L+ W +E+D Y TN + IK++V NK+D
Sbjct: 72 RFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNH-WMQEVDTYCTNDNIIKMMVANKIDMP 130
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ RVVT++EG+ FA+ + LFIE SAKT+ VQ FEEL+ KI+ TP L
Sbjct: 131 N-RVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDL 178
>gi|449544952|gb|EMD35924.1| hypothetical protein CERSUDRAFT_53067 [Ceriporiopsis subvermispora
B]
Length = 223
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 132/181 (72%), Gaps = 7/181 (3%)
Query: 16 KLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
KLL+IG+S VGKSSLLL F+ + + +E S TIGVDF+V ++V GKK+KL+IWDTAGQ
Sbjct: 13 KLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMEVNGKKVKLSIWDTAGQ 72
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRT+TSSYYRGAQGII+VYDV R++F L W E++ Y + +K++VGNKVDK
Sbjct: 73 ERFRTITSSYYRGAQGIILVYDVANRESFDALPR-WYSELETY-VSSSVVKIIVGNKVDK 130
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE--GSKGL 190
E R V+ EG FA+ G LF+E SAKT V V++ F+E+V KI+DTP L A GSK
Sbjct: 131 EFSRQVSYSEGQQFAQRMGSLFVEASAKTSVGVREAFQEVVEKIIDTPELWAPVAGSKSA 190
Query: 191 K 191
+
Sbjct: 191 R 191
>gi|393244988|gb|EJD52499.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 228
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 129/174 (74%), Gaps = 5/174 (2%)
Query: 16 KLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
KLL+IG+S VGKSSLLL FT + + +E S TIGVDF+V ++V GKK+KL+IWDTAGQ
Sbjct: 17 KLLIIGNSSVGKSSLLLRFTDEQWLPEDESSATIGVDFRVCKMEVKGKKVKLSIWDTAGQ 76
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRT+TSSYYRGAQGI +VYDV+ R++F L W E++ Y + +K+LVGNK+DK
Sbjct: 77 ERFRTITSSYYRGAQGIFLVYDVSNRESFDALPR-WFSELETY-VSSSVVKMLVGNKLDK 134
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG 186
E R V+++EG FA GCLF+E SAKT NV++ F E+V KILDTP L G
Sbjct: 135 EFSRTVSREEGQKFADRMGCLFVESSAKTAANVREAFVEMVEKILDTPELWQPG 188
>gi|403295007|ref|XP_003938448.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 235
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 134/209 (64%), Gaps = 34/209 (16%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIW------ 67
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIW
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVTLHWQ 68
Query: 68 -----------------------DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL 104
DTAGQERFRTLT SYYRGAQG+I+VYDVTRRDTF L
Sbjct: 69 TENFFLKGQIGFSPDLKWPIWQSDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL 128
Query: 105 SDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVN 164
D W E++ Y T D + +LVGNK+DKE+ R V + EG+ FAR++ LFIE SAKT
Sbjct: 129 -DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDG 186
Query: 165 VQQCFEELVLKILDTPSLL--AEGSKGLK 191
VQ FEELV KI+ TP L +KG+K
Sbjct: 187 VQCAFEELVEKIIQTPGLWESENQNKGVK 215
>gi|390465163|ref|XP_003733352.1| PREDICTED: uncharacterized protein LOC100402013 [Callithrix
jacchus]
Length = 235
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/198 (55%), Positives = 128/198 (64%), Gaps = 32/198 (16%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIW------ 67
K L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIW
Sbjct: 9 LKFLIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVSLHQH 68
Query: 68 -----------------------DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL 104
DTAGQERFRTLT SYYRGAQG+I+VYDVTRRDTF L
Sbjct: 69 TKNFFLKGQIGFRPTLKWPIWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL 128
Query: 105 SDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVN 164
D W E++ Y T D + +LVGNK+DKE+ R V + EG+ FAR++ LFIE SAKT
Sbjct: 129 -DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDG 186
Query: 165 VQQCFEELVLKILDTPSL 182
VQ FEELV KI+ TP L
Sbjct: 187 VQCAFEELVEKIIQTPGL 204
>gi|308477314|ref|XP_003100871.1| CRE-RAB-18 protein [Caenorhabditis remanei]
gi|308264445|gb|EFP08398.1| CRE-RAB-18 protein [Caenorhabditis remanei]
Length = 202
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 126/169 (74%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSL+L F D F+ E + TIGVDF+V + + G ++KLAIWDTAGQE
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQE 71
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I VYDVT R +F L+ W E+D Y TN + IK++V NK+D
Sbjct: 72 RFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNH-WMTEVDTYCTNDNIIKMMVANKIDMP 130
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ RVV+++EG+ FA+ + LFIE SAKTR VQ FEEL+ KI+ TP L
Sbjct: 131 N-RVVSREEGLKFAKRHRTLFIEASAKTREGVQCTFEELIEKIIQTPDL 178
>gi|58261356|ref|XP_568088.1| ras-related protein ypt1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115607|ref|XP_773517.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256143|gb|EAL18870.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230170|gb|AAW46571.1| ras-related protein ypt1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 205
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 140/213 (65%), Gaps = 18/213 (8%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLA 65
S E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL
Sbjct: 2 SAPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRT+TSSYYRGA GII+VYDVT RDT+TN+ W +EID Y+ + KLL
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQ-WLQEIDRYAV-EGVNKLL 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLL 183
VGNK D +++VV E +FA E G F+E SAK NV+Q F + +I D S +
Sbjct: 120 VGNKSDLATKKVVEYAEAKSFADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGSSTM 179
Query: 184 AEGS------KGLKKNIFKQKPPEADAAASGCC 210
A G KGL +N+ +QK A GCC
Sbjct: 180 ASGPGAKSTIKGLGQNV-EQK------TAGGCC 205
>gi|393214870|gb|EJD00362.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 234
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 127/175 (72%), Gaps = 5/175 (2%)
Query: 16 KLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
KLL+IG+S VGKSSLLL F+ + + +E S TIGVDF+V +++ GKK+KL+IWDTAGQ
Sbjct: 19 KLLLIGNSSVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEINGKKVKLSIWDTAGQ 78
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRT+TSSYYRGAQGII+VYDV R++F L W E+ Y ++ +K+LVGNKVDK
Sbjct: 79 ERFRTITSSYYRGAQGIILVYDVANRESFAALPR-WYSELGTYVSDS-VVKILVGNKVDK 136
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
E R V EG FA+ G LF+E SAKT V V++ F ++V +ILDTP L A S
Sbjct: 137 EFSRQVPTSEGAAFAQRMGSLFVEASAKTAVGVREAFTDVVERILDTPELWAPVS 191
>gi|209881799|ref|XP_002142337.1| Ras small GTPase RIC1/ypt1 protein [Cryptosporidium muris RN66]
gi|209557943|gb|EEA07988.1| Ras small GTPase RIC1/ypt1 protein, putative [Cryptosporidium muris
RN66]
Length = 203
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 133/205 (64%), Gaps = 10/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ + + K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTITLENKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT RD+F N+ W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAM-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S+RVVT EG A YG FIE SAK NV+Q F + +I L + +K
Sbjct: 122 KCDLVSKRVVTSDEGKELADSYGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQLNNQNTK 181
Query: 189 GLKKNIFKQKPPEADAAA---SGCC 210
G + +Q P A A GCC
Sbjct: 182 G----VTQQGPKLAGAQPIRQGGCC 202
>gi|294883408|ref|XP_002770925.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239874051|gb|EER02741.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 211
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 134/203 (66%), Gaps = 4/203 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 9 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 68
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT R++F N+ W +EID Y+T ++ KLLVGN
Sbjct: 69 TAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKH-WVQEIDKYAT-ENVSKLLVGN 126
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S++VVT EG A + G F+E SAK NV+Q F E+ I + S+
Sbjct: 127 KSDLTSKKVVTYDEGKELADQLGISFLETSAKNSHNVEQAFIEMSRGIKSRVKTTPQPSR 186
Query: 189 GLKKNIFKQKPPE-ADAAASGCC 210
+ +P + A SGCC
Sbjct: 187 SGAGGPARLRPGQPAHGNQSGCC 209
>gi|392574050|gb|EIW67187.1| hypothetical protein TREMEDRAFT_40402 [Tremella mesenterica DSM
1558]
Length = 205
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 134/204 (65%), Gaps = 6/204 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT RDTFTN+ W +EID Y+ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDRDTFTNVKQ-WLQEIDRYAV-EGVNKLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLLAEG 186
K D +++VV E +FA E G F+E SAK NV+Q F + +I D + +A G
Sbjct: 123 KSDLTTKKVVEHNEAKSFADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGSTSMASG 182
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
S G K I A GCC
Sbjct: 183 SGG-KSTIKGLGQTVEQKTAGGCC 205
>gi|294949450|ref|XP_002786203.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239900360|gb|EER17999.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 205
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/208 (51%), Positives = 136/208 (65%), Gaps = 15/208 (7%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT R++F N+ W +EID Y+T ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKH-WVQEIDKYAT-ENVSKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELV------LKILDTPSL 182
K D S++VVT EG A + G F+E SAK NV+Q F E+ +K P+
Sbjct: 122 KTDLTSKKVVTYDEGKELADQLGVPFLETSAKNSHNVEQAFIEMSSEIKSRVKTAPQPNR 181
Query: 183 LAEGSKGLKKNIFKQKPPEADAAASGCC 210
G+ L+ +P A SGCC
Sbjct: 182 SGAGAARLRPG----QP--AHGNQSGCC 203
>gi|390594811|gb|EIN04220.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 272
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 124/172 (72%), Gaps = 5/172 (2%)
Query: 16 KLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
KLL+IG+S VGKSS LL F+ + + EE S TIGVDF+V ++V GKK+KL+IWDTAGQ
Sbjct: 14 KLLLIGNSSVGKSSFLLRFSDEQWLPEEEASATIGVDFRVHKMEVKGKKVKLSIWDTAGQ 73
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRT+TSSYYRGAQGII++YDV+ R++F L W E++ Y + K++VGNKVDK
Sbjct: 74 ERFRTITSSYYRGAQGIILMYDVSNRESFDALPR-WFSELETY-VSPSVAKIIVGNKVDK 131
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
E R V EG FA+ LFIE SAKT V V + FEELV +I+DTP L A
Sbjct: 132 EFSRQVATGEGAAFAQRMDSLFIEASAKTAVGVSEAFEELVERIMDTPELWA 183
>gi|341891892|gb|EGT47827.1| hypothetical protein CAEBREN_03430 [Caenorhabditis brenneri]
Length = 202
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 127/169 (75%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSL+L F D F+ E + TIGVDF+V + + G ++KLAIWDTAGQE
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMVIDGNRVKLAIWDTAGQE 71
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I VYDVT R +F L+ W E+D Y TN++ IK++V NK+D
Sbjct: 72 RFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNH-WMTEVDTYCTNENIIKMMVANKIDMP 130
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ RVV+++EG+ FA+ + LFIE SAKT+ VQ FEEL+ KI+ TP L
Sbjct: 131 N-RVVSREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDL 178
>gi|328861035|gb|EGG10139.1| hypothetical protein MELLADRAFT_71064 [Melampsora larici-populina
98AG31]
Length = 228
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 142/218 (65%), Gaps = 14/218 (6%)
Query: 2 DSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVG 58
DSS+ Q KLL+IG S VGKSSLLL FT + F EE S TIGVDFKVK +
Sbjct: 14 DSSTDPPQ----TLKLLLIGSSSVGKSSLLLRFTDEVFLSAEEASATIGVDFKVKLMSRR 69
Query: 59 GKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYS-T 117
GK+ KL+IWDTAGQERFRTLTSSYYRGAQG+++VYDVT R++F +L W E+D ++ +
Sbjct: 70 GKRYKLSIWDTAGQERFRTLTSSYYRGAQGVVLVYDVTSRESFESLPS-WFSELDTFTHS 128
Query: 118 NQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
+D ++++VGNK DK+ R V+ +EG FA + LF+E SAKT V++ FE +V KI+
Sbjct: 129 PRDVVRIVVGNKTDKDYSREVSIEEGRAFAADNNALFVETSAKTMRGVEEVFEAVVDKII 188
Query: 178 DTPSLLAEGSKGLKKNIFKQKP-----PEADAAASGCC 210
DTPSL +G N P + DA SG C
Sbjct: 189 DTPSLHNKGLNLRSNNRLATLPGTITLDDDDAEESGWC 226
>gi|321256350|ref|XP_003193368.1| ras-related protein ypt1 [Cryptococcus gattii WM276]
gi|317459838|gb|ADV21581.1| ras-related protein ypt1, putative [Cryptococcus gattii WM276]
gi|405119560|gb|AFR94332.1| GTP-binding protein ypt1 [Cryptococcus neoformans var. grubii H99]
Length = 205
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/213 (52%), Positives = 139/213 (65%), Gaps = 18/213 (8%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLA 65
S E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL
Sbjct: 2 SAPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRT+TSSYYRGA GII+VYDVT RDT+TN+ W +EID Y+ + KLL
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQ-WLQEIDRYAV-EGVNKLL 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLL 183
VGNK D +++VV E FA E G F+E SAK NV+Q F + +I D S +
Sbjct: 120 VGNKSDLATKKVVEYAEAKAFADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGSSTM 179
Query: 184 AEGS------KGLKKNIFKQKPPEADAAASGCC 210
A G KGL +N+ +QK A GCC
Sbjct: 180 ASGPGAKSTIKGLGQNV-EQK------TAGGCC 205
>gi|268575806|ref|XP_002642883.1| C. briggsae CBR-RAB-18 protein [Caenorhabditis briggsae]
gi|74765201|sp|P90726.1|RAB18_CAEBR RecName: Full=Ras-related protein Rab-18
gi|1710360|gb|AAB38279.1| membrane associated GTP binding protein RAB18 [Caenorhabditis
briggsae]
Length = 202
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 124/169 (73%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSL+L F D F+ E + TIGVDF+V + + G ++KLAIWDTAGQE
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMTIDGNRVKLAIWDTAGQE 71
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I VYDVT R +F L W E+D Y TN + IK++V NK+D
Sbjct: 72 RFRTLTPSYYRGAQGVICVYDVTSRSSFEKLKH-WMTEVDTYCTNDNVIKMMVANKIDMP 130
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R VT++EG+ FA+ + LFIE SAKT+ VQ FEEL+ KI+ TP L
Sbjct: 131 N-RTVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDL 178
>gi|167521531|ref|XP_001745104.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776718|gb|EDQ90337.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 136/197 (69%), Gaps = 7/197 (3%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
FK+L+IGDS GKSSLL++FT F+E + PTIGVDFK K + + G K+ L +WDTAGQE
Sbjct: 9 FKVLIIGDSNCGKSSLLMAFTEGTFDESIGPTIGVDFKQKSLMLDGNKVNLTLWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT+SYYRGA +I++YDV+R +TF ++ D+W E+++Y + +KLL+ NK+D
Sbjct: 69 RFRTLTASYYRGAHAVILLYDVSRPETFEHI-DMWLNEVNVYCPEKKIVKLLIANKID-- 125
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL-AEGSKGLKK 192
ER V+ + G +FAR+ +FIECSAKT+ VQQ FEEL K+LDTP L E KGL
Sbjct: 126 LERRVSTEVGRDFARDKQMMFIECSAKTKAGVQQAFEELAQKVLDTPELWNKEAVKGL-- 183
Query: 193 NIFKQKPPEADAAASGC 209
+I K D S C
Sbjct: 184 DIRGGKGGATDDPCSAC 200
>gi|403413519|emb|CCM00219.1| predicted protein [Fibroporia radiculosa]
Length = 224
Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 126/172 (73%), Gaps = 5/172 (2%)
Query: 16 KLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
KLL+IG+S VGKSSLLL F+ + + +E S TIGVDF+V ++V GKK+KL+IWDTAGQ
Sbjct: 14 KLLLIGNSSVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEVKGKKVKLSIWDTAGQ 73
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRT+TSSYYRGAQGII+VYDV R++F L W E++ Y + +K++VGNKVDK
Sbjct: 74 ERFRTITSSYYRGAQGIILVYDVANRESFDALPR-WYSELETY-VSPSVVKIIVGNKVDK 131
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
E R V+ EG +FA LF E SAKT + V++ F+E+V KILDTP L A
Sbjct: 132 EFSRQVSHSEGQHFAERMNSLFFEASAKTSIGVREAFQEVVEKILDTPELWA 183
>gi|66804573|ref|XP_636019.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74896885|sp|Q54GY8.1|RAB18_DICDI RecName: Full=Ras-related protein Rab-18
gi|60464366|gb|EAL62514.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 130/172 (75%), Gaps = 3/172 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E D +K+L+IGDS VGK+S++ F+ D F+E L TIGV+FK+K V V GKK+ L IWD
Sbjct: 2 EEDKQYKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWD 61
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQE+FR L SSYYRGA GII+ YDVT+R++F NL + W E++ ++ + +KLLVGN
Sbjct: 62 TAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNL-NYWLNEVENFANRSNLVKLLVGN 120
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
K+DKE+ R VT++EG FA++ LFIECSAK+++ +QQ FEEL KI++ P
Sbjct: 121 KIDKEN-REVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIP 171
>gi|326430486|gb|EGD76056.1| GTP-binding protein yptV3 [Salpingoeca sp. ATCC 50818]
Length = 199
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 134/201 (66%), Gaps = 5/201 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWD 68
+ D K+L+IGDS GKS LL+ FT D F+E + PTIGVDFK K + + G+++KL +WD
Sbjct: 3 DVDAELKILIIGDSNCGKSCLLMRFTDDTFDEHMGPTIGVDFKNKMLTLNGQQVKLTVWD 62
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQ+RF+TLT+SYYRGA G+I+VYDVTRR TF ++ W E ++Y + + +K+LV N
Sbjct: 63 TAGQDRFKTLTASYYRGAHGVILVYDVTRRATFEHIIP-WLNEANVYC-DDNVVKMLVAN 120
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K+D+ R V+ EG ARE LFIECSAKT+V VQQ FEEL ++LDTP L S
Sbjct: 121 KIDE--PRQVSTDEGRALAREKNMLFIECSAKTKVGVQQAFEELAQQVLDTPELYQSPSS 178
Query: 189 GLKKNIFKQKPPEADAAASGC 209
G ++ + + GC
Sbjct: 179 GAGVDVSSSSSGQLNGDVCGC 199
>gi|395328454|gb|EJF60846.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 227
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 139/215 (64%), Gaps = 23/215 (10%)
Query: 16 KLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
KLL+IG+S VGKSSLLL F+ + + +E S TIGVDF+V +DV GKK+KL+IWDTAGQ
Sbjct: 15 KLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMDVKGKKVKLSIWDTAGQ 74
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRT+TSSYYRGAQGII+VYDV R++F L W E++ Y + +K++VGNKVDK
Sbjct: 75 ERFRTITSSYYRGAQGIILVYDVANRESFDALPK-WFSELETY-VSSSVVKIIVGNKVDK 132
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL--------- 183
E R V+ EG FA LF+E SAKT V VQ+ F ++V +I+DTP L
Sbjct: 133 EYSRQVSASEGQAFAARMDALFVEASAKTAVGVQEAFRDVVERIMDTPELWQTGAARKGG 192
Query: 184 ------AEGSKG--LKKNI-FKQKPPEADAAASGC 209
A G +G + +I +Q+P EA+ C
Sbjct: 193 SGKPGGASGGRGEDMPGSIDLRQEPDEAEGGGCSC 227
>gi|330806499|ref|XP_003291206.1| Rab GTPase [Dictyostelium purpureum]
gi|325078628|gb|EGC32269.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 127/165 (76%), Gaps = 3/165 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
+K+L+IGDS VGK+S++ F+ D F EE+ TIGV+FK+K V V GKK+ L IWDTAGQE
Sbjct: 7 YKVLLIGDSDVGKTSIVKRFSDDTFDEEVLTTIGVEFKMKEVKVDGKKVDLCIWDTAGQE 66
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
+FR L SSYYRGA GII+ YDVT+RDTF NL + W E++ ++ + +KLLVGNK+DKE
Sbjct: 67 KFRALISSYYRGAHGIILTYDVTKRDTFENL-NYWLNEVENFANRSNLVKLLVGNKIDKE 125
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
+ R ++++EG FA++ LFIECSAKT++ +QQ FEEL KI++
Sbjct: 126 N-REISREEGAEFAKKKAMLFIECSAKTKIGIQQAFEELAQKIIE 169
>gi|91082425|ref|XP_970378.1| PREDICTED: similar to RAB18, member RAS oncogene family [Tribolium
castaneum]
gi|270007517|gb|EFA03965.1| hypothetical protein TcasGA2_TC014110 [Tribolium castaneum]
Length = 204
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 124/169 (73%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSS+L+ FT DNF+ + + TIGVDFK K + V +KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSILVRFTEDNFDPDQTLTIGVDFKTKKLTVDDNTVKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYR AQG I+VYDVT TF L + W E++ YST + +K++VGNK+DKE
Sbjct: 69 RFRTLTPSYYRDAQGAILVYDVTNYSTFAKL-ETWLNELETYSTKANIVKMIVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V ++E + FAR + L+IE SAKTR VQ FEELV KI+ TP L
Sbjct: 128 N-REVNREEAMKFARRHQTLYIEASAKTRDGVQCAFEELVHKIIQTPGL 175
>gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti]
gi|108879268|gb|EAT43493.1| AAEL005069-PA [Aedes aegypti]
Length = 206
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/212 (49%), Positives = 140/212 (66%), Gaps = 11/212 (5%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKK 61
S+SA E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK
Sbjct: 2 SASAMSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKT 61
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
+KL IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++
Sbjct: 62 IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVK-TWLEEIERYAC-ENV 119
Query: 122 IKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LD 178
KLLVGNK D ++++VV + +A + G F+E SAK NV+Q F + +I +
Sbjct: 120 NKLLVGNKCDLQTKKVVDTTTAMEYANQLGIPFLETSAKNATNVEQAFMTMAAEIKNRVG 179
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
PS AE +K I K + E+ SGCC
Sbjct: 180 PPSSAAEAPSAVK--IDKSRSVESK---SGCC 206
>gi|332372776|gb|AEE61530.1| unknown [Dendroctonus ponderosae]
Length = 204
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 134/197 (68%), Gaps = 8/197 (4%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT DNF+ E + TIGVDFK K ++V G +KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTEDNFDPEQTLTIGVDFKTKKLNVEGNTVKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYR AQG I+V+DV + TF L + W E++ YST + +K+++GNK+D +
Sbjct: 69 RFRTLTPSYYRDAQGAILVFDVGSQATFAKL-ETWLNELETYSTKNNIVKMIIGNKIDVD 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
R V++++ + FAR + L+IE SAKT+ VQ FEELV KI+ TP L G N
Sbjct: 128 -HREVSREQAMAFARRHQTLYIEASAKTKHGVQAAFEELVHKIIQTPGLWESYDAG---N 183
Query: 194 IFKQKPPEADAAASGCC 210
I + +A SGC
Sbjct: 184 I--HVGTKDHSARSGCA 198
>gi|353244337|emb|CCA75747.1| related to YPT-1 GTP-binding protein ypt1 [Piriformospora indica
DSM 11827]
Length = 227
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/202 (51%), Positives = 128/202 (63%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 28 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 87
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 88 TAGQERFRTITSSYYRGAHGIIVVYDVTDTDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 145
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S++VV FA + G F+E SAK NV+Q F + +I D G
Sbjct: 146 KSDLTSKKVVEYTVAKEFADQLGIPFLETSAKNATNVEQAFLTMAKQIKDKMGASGTGGP 205
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K N +SGCC
Sbjct: 206 TSKTNTITPGTGITTNTSSGCC 227
>gi|389743618|gb|EIM84802.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 228
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 127/179 (70%), Gaps = 6/179 (3%)
Query: 16 KLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
KLL+IG+S VGKSSLLL F+ + + +E S TIGVDF+V +DV GKK+KL+IWDTAGQ
Sbjct: 13 KLLLIGNSSVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMDVKGKKVKLSIWDTAGQ 72
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRT+TSSYYRGAQGII+VYDV+ R++F L W E++ Y + +K++VGNKVDK
Sbjct: 73 ERFRTITSSYYRGAQGIILVYDVSNRESFDALPR-WFSELETY-VSSSVVKIIVGNKVDK 130
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL-AEGSKGL 190
E R V E FA CLF+E SAKT V V+ F +V +ILDTP L + GSK +
Sbjct: 131 EYSRQVPTAEAEQFAARQNCLFVEASAKTSVGVRDAFRNVVAQILDTPELWDSAGSKAV 189
>gi|443710459|gb|ELU04712.1| hypothetical protein CAPTEDRAFT_155110 [Capitella teleta]
Length = 198
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 133/183 (72%), Gaps = 4/183 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ LL F+ D F TIG+DFK+K V++GGKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVELGGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+S W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKTFDNISK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPSLLA 184
+GNK D E +R V K+ G + ARE+G F+E SAK+ VNV++ F +L IL+ TPS A
Sbjct: 120 LGNKCDIEDKRQVPKQRGESIAREHGIPFLETSAKSNVNVEKAFMDLAQAILNKTPSKDA 179
Query: 185 EGS 187
+G
Sbjct: 180 DGH 182
>gi|338721465|ref|XP_001494344.3| PREDICTED: ras-related protein Rab-18-like [Equus caballus]
Length = 248
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 99/154 (64%), Positives = 115/154 (74%), Gaps = 3/154 (1%)
Query: 30 LLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQG 88
LLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQERFRTLT SYYRGAQG
Sbjct: 66 LLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQG 125
Query: 89 IIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAR 148
+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE+ R V + EG+ FAR
Sbjct: 126 VILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFAR 183
Query: 149 EYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 184 KHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 217
>gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502]
gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium parvum]
gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis]
Length = 203
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 133/205 (64%), Gaps = 10/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ + + K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT RD+F N+ W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAM-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S+RVVT EG A +G FIE SAK NV+Q F + +I + ++ ++
Sbjct: 122 KCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQVNSQNTR 181
Query: 189 GLKKNIFKQKPPEADAAA---SGCC 210
G +Q P A A GCC
Sbjct: 182 GSA----QQGPKLAGAQPIRQGGCC 202
>gi|392588635|gb|EIW77967.1| ras-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 229
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 126/172 (73%), Gaps = 5/172 (2%)
Query: 16 KLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
KLL+IG++ VGKSSLLL F+ + + +E + TIGVDF+V ++V G+K+KL+IWDTAGQ
Sbjct: 20 KLLLIGNASVGKSSLLLRFSDEQWLPEDEATATIGVDFRVHKMEVNGRKVKLSIWDTAGQ 79
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRT+TSSYYRGAQGII+VYDV+ R+TF L W EI+ Y + ++++VGNK+DK
Sbjct: 80 ERFRTITSSYYRGAQGIILVYDVSNRETFEALPR-WFSEIETY-VSPTVVRIIVGNKLDK 137
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
E+ R V EG FA LF+E SAKT V V++ FE++V ILDTP L A
Sbjct: 138 ENSRQVPTSEGAAFAERQDALFLEASAKTAVGVRETFEDVVRHILDTPELWA 189
>gi|359318893|ref|XP_848769.2| PREDICTED: ras-related protein Rab-18 isoform 2 [Canis lupus
familiaris]
Length = 236
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 127/199 (63%), Gaps = 33/199 (16%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIW------ 67
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIW
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWFLFWGC 68
Query: 68 ------------------------DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTN 103
TAGQERFRTLT SYYRGA G+I+VYDVTRRDTF
Sbjct: 69 KLLIYSTYSSSYYSSLYFGQEKKVGTAGQERFRTLTPSYYRGAPGVILVYDVTRRDTFVK 128
Query: 104 LSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRV 163
L D W E++ Y T D + +LVGNK+DKE+ R V + EG+ FAR++ LFIE SAKT
Sbjct: 129 L-DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCD 186
Query: 164 NVQQCFEELVLKILDTPSL 182
VQ FEELV KI+ TP L
Sbjct: 187 GVQCAFEELVEKIIQTPGL 205
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 204
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/206 (50%), Positives = 135/206 (65%), Gaps = 11/206 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLA 184
K D S++VV + FA E G F+E SAK NV+Q F E+ ++ P+L +
Sbjct: 122 KSDLASKKVVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPALSS 181
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
N+ Q P+ SGCC
Sbjct: 182 TSKPNNVTNLRGQAIPQ----KSGCC 203
>gi|392567328|gb|EIW60503.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 204
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 128/202 (63%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S++VV FA + G F+E SAK NV+Q F + +I D +
Sbjct: 123 KSDLTSKKVVEYSVAKEFADQLGIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTTTAAG 182
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K + AA GCC
Sbjct: 183 TGKSSTITPGQTVQQQAAGGCC 204
>gi|401410672|ref|XP_003884784.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
gi|325119202|emb|CBZ54756.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
Length = 202
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/202 (51%), Positives = 131/202 (64%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT RD+F N+ + W EID Y+ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFNNVKN-WMMEIDKYAM-EGVSKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S+RVV+ +EG FA FIE SAK NV+Q F + +I + + S+
Sbjct: 122 KCDLTSKRVVSFEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARVQVNQQQSR 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
N+ +SGCC
Sbjct: 182 P-NANVRIGPSQPVRNVSSGCC 202
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 133/204 (65%), Gaps = 12/204 (5%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKSSLLL F D + E TIGVDFK++ +++ GK +KL IWDTA
Sbjct: 35 DYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 94
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ ++ KLLVGNK
Sbjct: 95 GQERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQ-WLHEIDRYAA-ENVNKLLVGNKC 152
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLAEG 186
D E +RVVT ++G FA G F+E SAKT NV+Q F ++ ++ + PS
Sbjct: 153 DLEGKRVVTTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQIKARMKNQPSAAPAT 212
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
G+ N+ Q + GCC
Sbjct: 213 KPGV--NLRSQ---QVKKEGGGCC 231
>gi|268555746|ref|XP_002635862.1| C. briggsae CBR-RAB-1 protein [Caenorhabditis briggsae]
gi|308488626|ref|XP_003106507.1| CRE-RAB-1 protein [Caenorhabditis remanei]
gi|308253857|gb|EFO97809.1| CRE-RAB-1 protein [Caenorhabditis remanei]
Length = 205
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 137/209 (65%), Gaps = 8/209 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
+A E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 AAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD+T ++TF N+ W +EID Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ-WLQEIDRYAC-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PS 181
LLVGNK D ++R V + ++A + G F+E SAK+ NV+Q F + +I P
Sbjct: 120 LLVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPV 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
A G+ G++ P D +SGCC
Sbjct: 180 QGAGGAPGVR---ITGSQPVQDKKSSGCC 205
>gi|170036368|ref|XP_001846036.1| GTP-binding protein yptV3 [Culex quinquefasciatus]
gi|167879008|gb|EDS42391.1| GTP-binding protein yptV3 [Culex quinquefasciatus]
Length = 200
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 129/176 (73%), Gaps = 3/176 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
FK+L+IG+SGVGKSSL+L FT D+F+ + + TIGVDFK K V++ K+KLAIWDTAGQE
Sbjct: 10 FKILIIGESGVGKSSLMLRFTEDDFDKDQALTIGVDFKTKIVEIDNVKVKLAIWDTAGQE 69
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYR AQG I+VYDVT++DTF L + W E+++Y T + K++VGNK+D
Sbjct: 70 RFRTLTPSYYRDAQGAILVYDVTKKDTFQKL-ESWLNELEIYGTRNNMAKMIVGNKID-S 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
++R +T+ +G FA+++ +FIE SA+T V+ FEE+V KI++T L G
Sbjct: 128 TDRTITRDDGFRFAKKHRTMFIETSARTNEGVRDAFEEVVRKIMETDGLWERNDYG 183
>gi|336381842|gb|EGO22993.1| hypothetical protein SERLADRAFT_471590 [Serpula lacrymans var.
lacrymans S7.9]
Length = 241
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 134/198 (67%), Gaps = 16/198 (8%)
Query: 16 KLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
KLL+IG++ VGKSSLLL F+ + + +E S TIGVDF+V ++V G+K+KL+IWDTAGQ
Sbjct: 20 KLLLIGNASVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEVNGRKVKLSIWDTAGQ 79
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFR +TSSYYRGAQGII+VYDV R++F L W E++ Y + ++++VGNKVDK
Sbjct: 80 ERFRGITSSYYRGAQGIILVYDVANRESFEALPK-WFSELETYVPD-TVVRIIVGNKVDK 137
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA--EGSKGL 190
E R V EG +A G LF+E SAKT V V+ F+++V +IL+TP L A EG +G
Sbjct: 138 EQSRQVPTSEGSAYAIRSGALFVEASAKTSVGVRSAFQDVVGRILETPELWAPVEGGRG- 196
Query: 191 KKNIFKQKPPEADAAASG 208
PP A A SG
Sbjct: 197 --------PPIASARTSG 206
>gi|237843001|ref|XP_002370798.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|211968462|gb|EEB03658.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|221502504|gb|EEE28231.1| Rab family protein [Toxoplasma gondii VEG]
Length = 202
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/202 (51%), Positives = 131/202 (64%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT R++F N+ + W EID Y+ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKN-WMMEIDKYAM-EGVSKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S+R VT +EG FA FIE SAK NV+Q F + +I + + S+
Sbjct: 122 KCDLTSKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARVQVNQQQSR 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
N+ + +SGCC
Sbjct: 182 P-NANVRLGPSQPVRSVSSGCC 202
>gi|303272717|ref|XP_003055720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463694|gb|EEH60972.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 135/205 (65%), Gaps = 8/205 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ VD+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLEGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ N++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYA-NENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTPSLLAE 185
K D +++VV + FA E G F+E SAK NV++ F ++ +I + + L
Sbjct: 122 KSDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEEAFMKMAGEIKNRMASQPALNN 181
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
G KG + +P +A S CC
Sbjct: 182 GPKGATVRPGEGRP--VNANKSNCC 204
>gi|336369061|gb|EGN97403.1| hypothetical protein SERLA73DRAFT_184094 [Serpula lacrymans var.
lacrymans S7.3]
Length = 235
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 134/198 (67%), Gaps = 16/198 (8%)
Query: 16 KLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
KLL+IG++ VGKSSLLL F+ + + +E S TIGVDF+V ++V G+K+KL+IWDTAGQ
Sbjct: 20 KLLLIGNASVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEVNGRKVKLSIWDTAGQ 79
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFR +TSSYYRGAQGII+VYDV R++F L W E++ Y + ++++VGNKVDK
Sbjct: 80 ERFRGITSSYYRGAQGIILVYDVANRESFEALPK-WFSELETYVPDT-VVRIIVGNKVDK 137
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA--EGSKGL 190
E R V EG +A G LF+E SAKT V V+ F+++V +IL+TP L A EG +G
Sbjct: 138 EQSRQVPTSEGSAYAIRSGALFVEASAKTSVGVRSAFQDVVGRILETPELWAPVEGGRG- 196
Query: 191 KKNIFKQKPPEADAAASG 208
PP A A SG
Sbjct: 197 --------PPIASARTSG 206
>gi|56753826|gb|AAW25110.1| SJCHGC06157 protein [Schistosoma japonicum]
Length = 211
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/201 (50%), Positives = 133/201 (66%), Gaps = 7/201 (3%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVG-GKKLKLAIWDTAGQ 72
FKLL+IGDSGVGKSSLL+ +T+D FE +LS TIGVDFKVK V V G K+KL+IWDTAGQ
Sbjct: 12 FKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKLVTVPDGTKIKLSIWDTAGQ 71
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRTLT + YRG+ + VYDV R++F NL +W +E+ YS N + IKLLVGNK+D
Sbjct: 72 ERFRTLTPNVYRGSHAAVFVYDVANRESFDNLK-IWMEELKTYSDNPNMIKLLVGNKID- 129
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK---G 189
R+++++EG+ FAR Y + E SAKT V Q F ++V KI + L +G K
Sbjct: 130 SVPRLISREEGLRFARLYNMPYAETSAKTSEGVNQLFSDIVTKIFNHSELWNQGKKRALS 189
Query: 190 LKKNIFKQKPPEADAAASGCC 210
+ N + + SGCC
Sbjct: 190 NESNRANLTSSQEMQSHSGCC 210
>gi|355783089|gb|EHH65010.1| hypothetical protein EGM_18349 [Macaca fascicularis]
Length = 205
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 136/209 (65%), Gaps = 8/209 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PS 181
LLVGNK D +++VV FA G LF+E SAK NV+Q F + +I P
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGILFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
A G++ K N+ Q P + GCC
Sbjct: 180 ATAGGAE--KSNVKIQSTP-VKQSGGGCC 205
>gi|224001286|ref|XP_002290315.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220973737|gb|EED92067.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 122/168 (72%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKSSLLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQ-WLHEIDRYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D E +RVV+ ++G FA G F+E SAKT NV+Q F + +I
Sbjct: 122 KCDLEGKRVVSTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQI 169
>gi|412986893|emb|CCO15319.1| predicted protein [Bathycoccus prasinos]
Length = 204
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 132/206 (64%), Gaps = 10/206 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LL F D ++E TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLFRFADDTYQESYISTIGVDFKIRTVELEGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ N++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVK-TWLSEIDRYA-NENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLA 184
K D S++VV FA E G F+E SAK NV+Q F E+ ++ P +
Sbjct: 122 KSDLTSKKVVDYATAKAFADEIGIPFMETSAKNATNVEQAFVTMANEIKTRMASQPQAAS 181
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
S+G + +P A S CC
Sbjct: 182 GASRGATIRPGEGRPVNAK---SSCC 204
>gi|219116316|ref|XP_002178953.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409720|gb|EEC49651.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 208
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 126/168 (75%), Gaps = 3/168 (1%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKK 61
SSS+ Q+++DYLFKL++IGDSGVGKS LLL F D F E TIGVDF+ + V + K
Sbjct: 4 SSSSKQRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKT 63
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
+KL IWDTAGQERFRT+TS+YYRGA GIIMV+DVT D+F +++D W KE++ Y+ +
Sbjct: 64 VKLQIWDTAGQERFRTITSAYYRGADGIIMVFDVTSTDSFDHVND-WLKEVNRYAA-EGT 121
Query: 122 IKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
+KLLVGNK D+ ++RVVT+++ FA E G FIE SAK+ NV++ F
Sbjct: 122 VKLLVGNKSDRTADRVVTEEQAREFADELGIPFIETSAKSAKNVEEAF 169
>gi|307105958|gb|EFN54205.1| GTP-binding protein yptV1 [Chlorella variabilis]
Length = 204
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 134/209 (64%), Gaps = 10/209 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A Q E+D+LFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ V++ GK +KL
Sbjct: 2 AHQSEYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKL 61
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQERFRT+TSSYYRGA GII+V+DVT +++F N+ W EID Y+ N++ KL
Sbjct: 62 QIWDTAGQERFRTITSSYYRGAHGIIVVFDVTDQESFNNVKQ-WLNEIDRYA-NENVNKL 119
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
LVGNK D S+RVV FA E G FIE SAK NV+Q F + +I + +
Sbjct: 120 LVGNKTDLTSKRVVDFNTAKAFADEIGIPFIETSAKNASNVEQAFMTMAAEIKNRMAR-- 177
Query: 185 EGSKGLKKNIFKQKPPEADAAA---SGCC 210
+ K+ +P E + A S CC
Sbjct: 178 --EPAVNKSANTIRPGEGKSIATQKSSCC 204
>gi|348538098|ref|XP_003456529.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 202
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 132/202 (65%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK+ NV+Q F + +I A
Sbjct: 122 KCDLTTKKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATAGA 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K N+ Q P + ++ GCC
Sbjct: 182 AEKSNVKIQSKP-VNTSSGGCC 202
>gi|432607|gb|AAB28535.1| ras-related GTP binding protein possessing GTPase activity [Oryza
sativa]
Length = 202
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 132/202 (65%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D RVV+ + G A E G F+E SAK NV++ F + +I + + ++G
Sbjct: 122 KCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKN--RMASQGRT 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K Q P + A S CC
Sbjct: 180 NASKPATVQMPRQPVAQQSSCC 201
>gi|321473003|gb|EFX83971.1| hypothetical protein DAPPUDRAFT_223052 [Daphnia pulex]
Length = 203
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 135/205 (65%), Gaps = 9/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYSESYISTIGVDFKIRTIDLDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTPSLLAE 185
K D +++VV +A + G F+E SAK NV+Q F + +I + PS ++
Sbjct: 122 KCDLSTKKVVDYAAAKEYAEQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPPSAPSD 181
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
G G+ NI P + + SGCC
Sbjct: 182 GVGGI--NINSSSRP-VEQSKSGCC 203
>gi|17558550|ref|NP_503397.1| Protein RAB-1 [Caenorhabditis elegans]
gi|351059221|emb|CCD67094.1| Protein RAB-1 [Caenorhabditis elegans]
Length = 205
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 136/209 (65%), Gaps = 8/209 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
+A E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 AAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD+T ++TF N+ W +EID Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ-WLQEIDRYAC-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PS 181
LLVGNK D ++R V + ++A + G F+E SAK+ NV+Q F + +I P
Sbjct: 120 LLVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPV 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
A G+ G++ P D + GCC
Sbjct: 180 QGAGGAPGVR---ITGSQPVQDKKSGGCC 205
>gi|410917514|ref|XP_003972231.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
Length = 202
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 132/202 (65%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK+ NV+Q F + +I A
Sbjct: 122 KCDLTTKKVVDYTTAKEFADNLGIPFLETSAKSSTNVEQAFMTMAAEIKKRMGPGATAGA 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K N+ Q P + ++ GCC
Sbjct: 182 SEKSNVKIQSKP-VNTSSGGCC 202
>gi|399163137|gb|AFP33144.1| rab-1, partial [Caenorhabditis elegans]
Length = 204
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 136/209 (65%), Gaps = 8/209 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
+A E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 1 AAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 60
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD+T ++TF N+ W +EID Y+ ++ K
Sbjct: 61 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ-WLQEIDRYAC-ENVNK 118
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PS 181
LLVGNK D ++R V + ++A + G F+E SAK+ NV+Q F + +I P
Sbjct: 119 LLVGNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPV 178
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
A G+ G++ P D + GCC
Sbjct: 179 QGAGGAPGVR---ITGSQPVQDKKSGGCC 204
>gi|221220558|gb|ACM08940.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 135/204 (66%), Gaps = 8/204 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLLAEG 186
K D +++VV FA G F+E SAK+ NV+Q F + +I P A G
Sbjct: 122 KCDLTTKKVVDYTTAKEFADNLGIPFLEASAKSATNVEQAFMTMAAEIKKRMGPGATAGG 181
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
S+ K N+ Q P ++ GCC
Sbjct: 182 SE--KSNVKIQSTP-VKTSSGGCC 202
>gi|328768042|gb|EGF78089.1| hypothetical protein BATDEDRAFT_90991 [Batrachochytrium
dendrobatidis JAM81]
Length = 241
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 129/200 (64%), Gaps = 3/200 (1%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTA
Sbjct: 44 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTA 103
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT ++TF N+ W +EID +++ + KLLVGNK
Sbjct: 104 GQERFRTITSSYYRGAHGIIVVYDVTDQETFNNVKQ-WLQEIDRFAS-EGVHKLLVGNKS 161
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D E+++VV K FA + G F+E SAK NV+Q F + +I D +
Sbjct: 162 DLETKKVVDAKTAGEFATQLGIPFLETSAKNATNVEQAFLTMAKQIKDKMGAASSAQSNQ 221
Query: 191 KKNIFKQKPPEADAAASGCC 210
K K A +SGCC
Sbjct: 222 AKANIKVGQAVAPQQSSGCC 241
>gi|390598341|gb|EIN07739.1| GTP-binding protein ypt1 [Punctularia strigosozonata HHB-11173 SS5]
Length = 204
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S++VV +FA + F+E SAK NV+Q F + +I D + S
Sbjct: 123 KSDLTSKKVVEYSVAKDFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTASG 182
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K + A+ GCC
Sbjct: 183 PGKTSTVTPGQSVQQQASGGCC 204
>gi|299738319|ref|XP_001838277.2| Rab18 [Coprinopsis cinerea okayama7#130]
gi|298403253|gb|EAU83465.2| Rab18 [Coprinopsis cinerea okayama7#130]
Length = 223
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 127/177 (71%), Gaps = 8/177 (4%)
Query: 16 KLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
KLL+IG+S VGKSSLLL F+ + + +E S TIGVDF+V ++V GKK+KL+IWDTAGQ
Sbjct: 18 KLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMEVKGKKVKLSIWDTAGQ 77
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRT+TSSYYRGAQGII+VYDV R+TF L W E++ Y ++ +K+LVGN K
Sbjct: 78 ERFRTITSSYYRGAQGIILVYDVANRETFEALPR-WYSELETY-VSESVVKILVGN---K 132
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
E R V EG FA++ LF+E SAKT V V++ F+ELV +ILDTP L SKG
Sbjct: 133 EYSRQVPTAEGEKFAQKMNSLFVEASAKTAVGVKEVFQELVERILDTPELWDPKSKG 189
>gi|156402311|ref|XP_001639534.1| predicted protein [Nematostella vectensis]
gi|156226663|gb|EDO47471.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 137/205 (66%), Gaps = 8/205 (3%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +DYLFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 2 AKKSYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIEMQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T+ TF N+S W + I+ ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNISK-WLRNIEEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D + R+V+++ G ARE+G F+E SAKT +N++Q F+ L IL L +
Sbjct: 120 LGNKCDMDDRRIVSRERGEQIAREHGIRFLETSAKTNINIEQAFQYLAQDILKKE--LNK 177
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
S+ NI + GCC
Sbjct: 178 DSEEPSNNIHVHDQKD---KKGGCC 199
>gi|340509040|gb|EGR34616.1| hypothetical protein IMG5_005710 [Ichthyophthirius multifiliis]
Length = 210
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 128/183 (69%), Gaps = 3/183 (1%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAI 66
QQ++DYLFKLL+IG+S VGKSSLLL F+ + F E PTIGVDFK++ D+ GK +KL I
Sbjct: 4 QQDYDYLFKLLLIGNSSVGKSSLLLRFSDNIFNECFLPTIGVDFKIRTFDIQGKAVKLQI 63
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERF+T+TSSYY+GA GII+VYD+T R TF ++ D W E D + N++ IKLLV
Sbjct: 64 WDTAGQERFKTITSSYYKGAHGIILVYDITDRQTFKDI-DNWLAEAD-KNANENVIKLLV 121
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG 186
GNK+D E++R V+ EG A G FIE SA T NV+ F L +I+ ++
Sbjct: 122 GNKIDLENKRQVSFDEGKELADSLGIKFIETSALTASNVENAFVTLATEIISRVQKSSDN 181
Query: 187 SKG 189
+KG
Sbjct: 182 NKG 184
>gi|158287951|ref|XP_309827.4| AGAP010875-PA [Anopheles gambiae str. PEST]
gi|157019435|gb|EAA05523.4| AGAP010875-PA [Anopheles gambiae str. PEST]
Length = 203
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 128/176 (72%), Gaps = 3/176 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
FK+L+IG+SGVGKSSL+L FT ++F+ + + TIGVDFK K +D+ G K+KLAIWDTAGQE
Sbjct: 10 FKILIIGESGVGKSSLMLRFTENDFDSDQALTIGVDFKTKMLDLDGVKVKLAIWDTAGQE 69
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYR AQG I+VYDVT+ DTF L + W E+++Y T + K++VGNK+D
Sbjct: 70 RFRTLTPSYYRDAQGAILVYDVTKPDTFQKL-ESWLNELEIYGTRNNMAKMVVGNKIDHP 128
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
+ R + ++EG FA+++ +FIE SAKT V+ FEE+V KI++T L G
Sbjct: 129 N-RAIGREEGFRFAKKHRMMFIETSAKTSEGVKDAFEEVVRKIMETDGLWERNDYG 183
>gi|387914198|gb|AFK10708.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392881360|gb|AFM89512.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392884280|gb|AFM90972.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 136/209 (65%), Gaps = 8/209 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PS 181
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I P
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPG 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
+ GS+ K N+ Q P +++ GCC
Sbjct: 180 ATSGGSE--KSNVNIQSTP-VKSSSGGCC 205
>gi|240849344|ref|NP_001155696.1| RAB18B, member RAS oncogene family-like [Acyrthosiphon pisum]
gi|328718584|ref|XP_003246519.1| PREDICTED: ras-related protein Rab-18-B-like [Acyrthosiphon pisum]
gi|328718586|ref|XP_003246520.1| PREDICTED: ras-related protein Rab-18-B-like [Acyrthosiphon pisum]
gi|239789319|dbj|BAH71290.1| ACYPI007125 [Acyrthosiphon pisum]
Length = 200
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 123/169 (72%), Gaps = 4/169 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG SGVGKS LL FT D F + + TIGVDFK++ + V +KLA+WDTAGQE
Sbjct: 9 LKILLIGQSGVGKSCLLCRFTDDTFNVDNAVTIGVDFKMRKITVDNNNIKLALWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT +YYR QG ++VYDV+ RD+FT L + W E++ YST + IK++VGNK+D
Sbjct: 69 RFRTLTPNYYRDGQGAVLVYDVSNRDSFTCL-ETWINELNRYSTKTNIIKMVVGNKIDM- 126
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
ER VT++EGI FAR + LFIE SAKT+ V FEELV KI++TPSL
Sbjct: 127 -ERQVTREEGIAFARRHQTLFIETSAKTKEGVYMAFEELVRKIINTPSL 174
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 132/205 (64%), Gaps = 8/205 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ N++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQ-WLNEIDRYA-NENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTPSLLAE 185
K D ++R V + FA E G F+E SAK NV+Q F + +I + + L +
Sbjct: 122 KSDLTAKRAVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKTRMASQPALNQ 181
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
G KG + +P A S CC
Sbjct: 182 GPKGATVRPGEGRP--VGKANSQCC 204
>gi|346467487|gb|AEO33588.1| hypothetical protein [Amblyomma maculatum]
Length = 228
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKK 61
+S A E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK
Sbjct: 34 NSPAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKT 93
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
+KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W EID Y++ ++
Sbjct: 94 IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENV 151
Query: 122 IKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
KLLVGNK D + +VV+ + G FA E G F+E SAK NV F + I
Sbjct: 152 NKLLVGNKCDLTANKVVSYETGKAFADEIGIPFMETSAKNATNVXHAFMAMAADI 206
>gi|224012645|ref|XP_002294975.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220969414|gb|EED87755.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
Length = 213
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 135/206 (65%), Gaps = 6/206 (2%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
+++DYLFKL++IGDSGVGKS LLL F D F E TIGVDF+ + V +G K +KL IW
Sbjct: 10 KDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKMGKKTVKLQIW 69
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TS+YYRGA GIIMVYD T D+F +++D W KE++ Y++ C KLLVG
Sbjct: 70 DTAGQERFRTITSAYYRGADGIIMVYDTTSSDSFDHVND-WLKEVNRYASEGTC-KLLVG 127
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLLAE 185
NK D+ ++R VT ++ FA + G F+E SAKT NV++ F + +++ + A
Sbjct: 128 NKSDRTADRAVTTEQAKEFADDLGVAFLETSAKTAKNVEEAFLTMAGELIKQREAKIAAN 187
Query: 186 GSKGLKKNIFKQK-PPEADAAASGCC 210
G G + K E AA GCC
Sbjct: 188 GGDGKSDSQGKVSLTSEKKAALGGCC 213
>gi|432953336|ref|XP_004085355.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 130/202 (64%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + +VV FA G F+E SAK+ NV+Q F + +I A
Sbjct: 122 KCDLTTRKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATAGA 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K N+ Q P + + GCC
Sbjct: 182 AEKSNVKIQSKP-VNPSPGGCC 202
>gi|242020978|ref|XP_002430924.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212516142|gb|EEB18186.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 206
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL F D F+ P TIGVDFK K + V G ++KLA+WDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFIDDKFDPDQPLTIGVDFKTKEMTVDGNRVKLALWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTL SYYR A G I+VYDV+ TF + D W E+D+Y+T + IK++VGNK+D E
Sbjct: 69 RFRTLIPSYYRDAHGAILVYDVSNYITFRKIED-WLNELDVYATKPNLIKIIVGNKIDLE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLK 191
+R VTK+EGI A+ + LFIE S KT+ VQ +ELV KI+ TP L S L+
Sbjct: 128 -KREVTKEEGIKLAKRHATLFIESSVKTKDGVQTAMQELVQKIIQTPGLWDPISHNLR 184
>gi|389749024|gb|EIM90201.1| GTP-binding protein ypt1 [Stereum hirsutum FP-91666 SS1]
Length = 204
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 128/202 (63%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S++VV FA + F+E SAK NV+Q F + +I D + S
Sbjct: 123 KSDLTSKKVVEYSVAKEFADQLTIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPSG 182
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K + ASGCC
Sbjct: 183 TGKSSTITPGQTVQQQQASGCC 204
>gi|322803217|gb|EFZ23238.1| hypothetical protein SINV_08216 [Solenopsis invicta]
Length = 224
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 128/187 (68%), Gaps = 3/187 (1%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAI 66
Q++ + K+LMIG+S VGKSS+LL FT D F E + T+G+D+K K V++ G +KLAI
Sbjct: 5 QEDILTILKILMIGESNVGKSSILLRFTEDEFYENMQSTVGMDYKTKQVNIDGNVVKLAI 64
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRTLT SYYR QG I++YDVT R+TF L + W E++ Y D +K++V
Sbjct: 65 WDTAGQERFRTLTPSYYRDGQGAILMYDVTDRNTFVKL-ETWLNELNTYCNKTDIVKMVV 123
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG 186
GNK+D + R V+ ++G+ FAR + L+IE SAKT V+ CFEELV KI+ TP L
Sbjct: 124 GNKIDLPN-REVSTEDGLQFARRHQTLYIESSAKTADGVRCCFEELVQKIIQTPGLWDTH 182
Query: 187 SKGLKKN 193
S L N
Sbjct: 183 SMRLYDN 189
>gi|393220275|gb|EJD05761.1| GTP-binding protein ypt1 [Fomitiporia mediterranea MF3/22]
Length = 202
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 123/168 (73%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT DT+ N+ W +EID Y+++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTYKNVKQ-WLQEIDRYASD-NVNKLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D+ +E+VV FA++ G F+E SAKT +NV+Q F + +I
Sbjct: 123 KSDRTNEKVVEYAVASEFAKQLGIPFLETSAKTALNVEQAFLTMAREI 170
>gi|331234359|ref|XP_003329839.1| hypothetical protein PGTG_11776 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308829|gb|EFP85420.1| hypothetical protein PGTG_11776 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 236
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 122/172 (70%), Gaps = 5/172 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAG 71
KLL+IG S VGKSSLLL FT F EE S TIGVDFK K +D GK+ KL+IWDTAG
Sbjct: 31 LKLLLIGSSSVGKSSLLLRFTDQVFLSAEESSATIGVDFKFKLIDHKGKRYKLSIWDTAG 90
Query: 72 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYS-TNQDCIKLLVGNKV 130
QERFRTLTSSYYRGAQG+++VYDVT R +F +L W E+D ++ + QD ++++VGNKV
Sbjct: 91 QERFRTLTSSYYRGAQGVLLVYDVTNRASFESLPS-WFSELDTFAHSPQDVVRVIVGNKV 149
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
DK+ R V+ EG FA + +F E S KTR V + FE +V KI+D+ SL
Sbjct: 150 DKDESRTVSTDEGRAFASDNHAMFFETSVKTRKGVDEVFEAVVDKIIDSISL 201
>gi|307214891|gb|EFN89759.1| Ras-related protein Rab-18 [Harpegnathos saltator]
Length = 223
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 125/176 (71%), Gaps = 3/176 (1%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAI 66
Q+++ + K+LMIG+S VGKSS+LL FT D F E + T+G+D+K K + + G +KLAI
Sbjct: 3 QEDYLTILKILMIGESNVGKSSILLRFTEDEFYENMQSTVGMDYKTKQISIDGNIVKLAI 62
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRTLT SYYR QG I++YDVT R+TF L + W E++ Y D +K++V
Sbjct: 63 WDTAGQERFRTLTPSYYRDGQGAILMYDVTDRNTFVKL-ETWLNELNTYCNKTDIVKMVV 121
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
GNK+D + R V+ +EG+ FAR + L+IE SAKT V+ CFEELV KI+ TP L
Sbjct: 122 GNKIDLPN-REVSTEEGLQFARRHQTLYIESSAKTADGVKCCFEELVQKIIQTPGL 176
>gi|225710014|gb|ACO10853.1| Ras-related protein ORAB-1 [Caligus rogercresseyi]
Length = 201
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F NL VW +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLK-VWLQEIDRYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV +A + F+E SAK NV+Q F + +I +T +
Sbjct: 122 KCDLTTKKVVDYTTAKEYADQSSMPFLEASAKNATNVEQAFMTMAAEIKNT--VGPPAPS 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + P + SGCC
Sbjct: 180 GASGQVKIDSTPVQSKSGSGCC 201
>gi|206725460|ref|NP_001128655.1| RAB1A, member RAS oncogene family [Taeniopygia guttata]
gi|397529551|ref|NP_001257591.1| ras-related protein Rab-1A [Gallus gallus]
gi|345329074|ref|XP_001513393.2| PREDICTED: ras-related protein Rab-1A-like [Ornithorhynchus
anatinus]
gi|197127903|gb|ACH44401.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197127905|gb|ACH44403.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 132/207 (63%), Gaps = 4/207 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A K N+ Q P ++ GCC
Sbjct: 180 ATAGGAEKSNVKIQSTP-VKQSSGGCC 205
>gi|290970854|ref|XP_002668282.1| rab family small GTPase [Naegleria gruberi]
gi|284081592|gb|EFC35538.1| rab family small GTPase [Naegleria gruberi]
Length = 197
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 143/211 (67%), Gaps = 23/211 (10%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLA 65
+ + FD+ FKL+++GDS GKSS++ FT D F E++SPTIGVDFKVK+++V KK+KL
Sbjct: 2 TSKAFDHNFKLVLVGDSATGKSSIITQFTEDEFKEQMSPTIGVDFKVKFMNVNRKKVKLT 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
I+DTAG A GII+VYDVTR +TF N+ + W KE DLYST ++C+KLL
Sbjct: 62 IFDTAG-------------NAHGIILVYDVTREETFNNIKN-WLKECDLYSTFEECVKLL 107
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK+D + ER V+ ++ NFA+ ++IE SAKT+ NV + FEE+V +IL+T +LL E
Sbjct: 108 IGNKIDLKEERKVSLQDAQNFAKSNNMVYIETSAKTKENVDKAFEEVVYQILNTTNLL-E 166
Query: 186 GSKGLKK------NIFKQKPPEADAAASGCC 210
++ ++ NI +P E++ SGCC
Sbjct: 167 STEPVRNKPTDNVNISTSEPNESE-GGSGCC 196
>gi|224136446|ref|XP_002326862.1| predicted protein [Populus trichocarpa]
gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa]
gi|222835177|gb|EEE73612.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 132/203 (65%), Gaps = 7/203 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S +VV+ ++ FA E G F+E SAK NV+Q F + I D + +
Sbjct: 122 KSDLTSNKVVSYEQAKAFADEIGIPFMETSAKDATNVEQAFMAMSAAIKDRMASQPAMNN 181
Query: 189 GLKKNI-FKQKPPEADAAASGCC 210
+ FK +P E GCC
Sbjct: 182 AKPSTVQFKGQPVEQKG---GCC 201
>gi|89257443|gb|ABD64935.1| GTP-binding protein, putative [Brassica oleracea]
Length = 203
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 132/202 (65%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+ YDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S++VV+ + FA E G F+E SAK NV++ F + I + ++ S
Sbjct: 122 KNDLTSQKVVSTETAQAFADELGIPFLETSAKNATNVEEAFMAMTAAI--KTRMASQPSG 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G K + + + SGCC
Sbjct: 180 GAKPPTVQIRGQPVNQQQSGCC 201
>gi|156555777|ref|XP_001602999.1| PREDICTED: ras-related protein Rab-18-B-like [Nasonia vitripennis]
Length = 223
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 121/170 (71%), Gaps = 3/170 (1%)
Query: 14 LFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
+ K+LMIG++ VGKSS+LL FT D F + + T+G+D+K K V + G +KLAIWDTAGQ
Sbjct: 9 ILKILMIGETNVGKSSILLRFTEDEFHDNIQNTVGMDYKSKKVTIDGNTVKLAIWDTAGQ 68
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRTLT +YYR QG I+VYDVT R TFT L D+W E+ Y D +K++VGNK+D
Sbjct: 69 ERFRTLTPNYYRDGQGAILVYDVTDRSTFTKL-DMWLNELHTYCNKTDIVKMVVGNKIDL 127
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+R VT +EG+ FAR + L+IE SAKT V+ CFEELV KI+ TP L
Sbjct: 128 -PDRQVTTEEGLQFARRHQTLYIESSAKTADGVKCCFEELVQKIIQTPGL 176
>gi|387017956|gb|AFJ51096.1| ras-related protein Rab-1A [Crotalus adamanteus]
Length = 205
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 132/207 (63%), Gaps = 4/207 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A K N+ Q P ++ GCC
Sbjct: 180 ATSGGAEKSNVKIQSTP-VKQSSGGCC 205
>gi|223649310|gb|ACN11413.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 131/202 (64%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK+ NV+Q F + +I A
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATTGG 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K N+ Q P A+ GCC
Sbjct: 182 NEKSNVKIQSTP-VKPASGGCC 202
>gi|145535548|ref|XP_001453507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833747|emb|CAI39343.1| rab_B22 [Paramecium tetraurelia]
gi|124421229|emb|CAK86110.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 139/207 (67%), Gaps = 9/207 (4%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAI 66
QQE+DYLFK+L+IG+S VGKSSLLL F + F E PTIGVDFK++ D+ GK +KL I
Sbjct: 4 QQEYDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQI 63
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERF+T+T+SYY+GA GII+VYDVT + +F ++ + W E++ Y+ N++ +++LV
Sbjct: 64 WDTAGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVEN-WLAEVEKYA-NENVVRVLV 121
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG 186
GNKVD ES+R VT +EG A FIE SAK NV++ F L +I + +A+G
Sbjct: 122 GNKVDLESKREVTFEEGKELADSLNIRFIETSAKNSSNVEKAFITLANEI---KAKVAKG 178
Query: 187 SKGLKKNIFKQKPPEADAAA---SGCC 210
S+ + + P+ +GCC
Sbjct: 179 SEAVPIKTGPRITPDQQQNTVKDTGCC 205
>gi|4758988|ref|NP_004152.1| ras-related protein Rab-1A isoform 1 [Homo sapiens]
gi|6679587|ref|NP_033022.1| ras-related protein Rab-1A [Mus musculus]
gi|45433570|ref|NP_112352.2| ras-related protein Rab-1A [Rattus norvegicus]
gi|55741705|ref|NP_001003153.1| ras-related protein Rab-1A [Canis lupus familiaris]
gi|381140057|ref|NP_001244201.1| RAB1A, member RAS oncogene family [Macaca mulatta]
gi|149727528|ref|XP_001493347.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Equus
caballus]
gi|291386694|ref|XP_002709883.1| PREDICTED: RAB1A, member RAS oncogene family isoform 1 [Oryctolagus
cuniculus]
gi|296223703|ref|XP_002757737.1| PREDICTED: ras-related protein Rab-1A-like [Callithrix jacchus]
gi|301784597|ref|XP_002927708.1| PREDICTED: ras-related protein Rab-1A-like [Ailuropoda melanoleuca]
gi|332813296|ref|XP_530454.3| PREDICTED: ras-related protein Rab-1A isoform 3 [Pan troglodytes]
gi|344283860|ref|XP_003413689.1| PREDICTED: ras-related protein Rab-1A-like [Loxodonta africana]
gi|348563536|ref|XP_003467563.1| PREDICTED: ras-related protein Rab-1A-like [Cavia porcellus]
gi|354471845|ref|XP_003498151.1| PREDICTED: ras-related protein Rab-1A-like [Cricetulus griseus]
gi|395731755|ref|XP_002812010.2| PREDICTED: ras-related protein Rab-1A [Pongo abelii]
gi|395829763|ref|XP_003788014.1| PREDICTED: ras-related protein Rab-1A [Otolemur garnettii]
gi|397521755|ref|XP_003830953.1| PREDICTED: ras-related protein Rab-1A [Pan paniscus]
gi|402891075|ref|XP_003908785.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|402891077|ref|XP_003908786.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|403260564|ref|XP_003922736.1| PREDICTED: ras-related protein Rab-1A [Saimiri boliviensis
boliviensis]
gi|410954918|ref|XP_003984106.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Felis catus]
gi|51338603|sp|P62820.3|RAB1A_HUMAN RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338604|sp|P62821.3|RAB1A_MOUSE RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338716|sp|Q6NYB7.3|RAB1A_RAT RecName: Full=Ras-related protein Rab-1A
gi|51338790|sp|P62822.3|RAB1A_CANFA RecName: Full=Ras-related protein Rab-1A
gi|2144600|pir||TVDGYP GTP-binding protein Rab1 - dog
gi|6969622|gb|AAF33844.1|AF226873_1 small GTP-binding protein RAB1A [Mus musculus]
gi|20379034|gb|AAM21077.1|AF498929_1 small GTP binding protein RAB1A [Homo sapiens]
gi|55457|emb|CAA68284.1| unnamed protein product [Mus musculus]
gi|550060|gb|AAA60240.1| GTP-binding protein [Homo sapiens]
gi|763158|emb|CAA33760.1| GTP-binding protein [Mus musculus]
gi|6006435|emb|CAB56775.1| rab1 [Canis lupus familiaris]
gi|12654175|gb|AAH00905.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|26329917|dbj|BAC28697.1| unnamed protein product [Mus musculus]
gi|33096735|emb|CAE11872.1| hypothetical protein [Homo sapiens]
gi|37515280|gb|AAH02077.3| RAB1, member RAS oncogene family [Mus musculus]
gi|44890248|gb|AAH66662.1| RAB1, member RAS oncogene family [Rattus norvegicus]
gi|49168464|emb|CAG38727.1| RAB1A [Homo sapiens]
gi|54695926|gb|AAV38335.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|54695928|gb|AAV38336.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|61355917|gb|AAX41190.1| RAB1A member RAS oncogene family [synthetic construct]
gi|61355926|gb|AAX41191.1| RAB1A member RAS oncogene family [synthetic construct]
gi|74147521|dbj|BAE38660.1| unnamed protein product [Mus musculus]
gi|74189058|dbj|BAE39292.1| unnamed protein product [Mus musculus]
gi|74197039|dbj|BAE35072.1| unnamed protein product [Mus musculus]
gi|112292935|dbj|BAF02845.1| Rab1A [Mus musculus]
gi|119620324|gb|EAW99918.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119620328|gb|EAW99922.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|120419448|gb|ABM21543.1| RAB1A, member RAS oncogene family [Bos taurus]
gi|123994817|gb|ABM85010.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|148675882|gb|EDL07829.1| RAB1, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149044748|gb|EDL97934.1| rCG23301, isoform CRA_b [Rattus norvegicus]
gi|159906367|gb|ABX10872.1| RAB1A [Capra hircus]
gi|189054895|dbj|BAG37879.1| unnamed protein product [Homo sapiens]
gi|190689469|gb|ACE86509.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|190690831|gb|ACE87190.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|307685159|dbj|BAJ20510.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|355562769|gb|EHH19363.1| hypothetical protein EGK_20053 [Macaca mulatta]
gi|380783935|gb|AFE63843.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|380783937|gb|AFE63844.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|383420425|gb|AFH33426.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|384948550|gb|AFI37880.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|410220890|gb|JAA07664.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410220892|gb|JAA07665.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308940|gb|JAA33070.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308942|gb|JAA33071.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308944|gb|JAA33072.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410350819|gb|JAA42013.1| RAB1A, member RAS oncogene family [Pan troglodytes]
Length = 205
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 131/207 (63%), Gaps = 4/207 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A K N+ Q P + GCC
Sbjct: 180 ATAGGAEKSNVKIQSTP-VKQSGGGCC 205
>gi|392876316|gb|AFM86990.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 136/209 (65%), Gaps = 8/209 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GI++VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIMVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PS 181
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I P
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPG 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
+ GS+ K N+ Q P +++ GCC
Sbjct: 180 ATSGGSE--KSNVNIQSTP-VKSSSGGCC 205
>gi|350418387|ref|XP_003491843.1| PREDICTED: ras-related protein Rab-18-like [Bombus impatiens]
Length = 223
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 122/175 (69%), Gaps = 3/175 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIW 67
Q+ + KLLMIG+S VGKSS+LL FT D F E + T+G+D++ K V + G +KLAIW
Sbjct: 3 QDVLTVLKLLMIGESNVGKSSILLRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLAIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRTLT SYYR QG I+VYDVT R TF L + W E++ Y D IK++VG
Sbjct: 63 DTAGQERFRTLTPSYYRDGQGAILVYDVTDRVTFMKL-ETWLNELNTYCNKTDIIKMVVG 121
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
NK+D + R V+ +EG+ FAR + L+IE SAKT ++ CFEELV KI+ TP L
Sbjct: 122 NKIDLPN-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGL 175
>gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene family [synthetic construct]
Length = 206
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 131/207 (63%), Gaps = 4/207 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A K N+ Q P + GCC
Sbjct: 180 ATAGGAEKSNVKIQSTP-VKQSGGGCC 205
>gi|340726562|ref|XP_003401625.1| PREDICTED: ras-related protein Rab-18-like [Bombus terrestris]
Length = 223
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 122/175 (69%), Gaps = 3/175 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIW 67
Q+ + KLLMIG+S VGKSS+LL FT D F E + T+G+D++ K V + G +KLAIW
Sbjct: 3 QDVLTVLKLLMIGESNVGKSSILLRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLAIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRTLT SYYR QG I+VYDVT R TF L + W E++ Y D IK++VG
Sbjct: 63 DTAGQERFRTLTPSYYRDGQGAILVYDVTDRVTFMKL-ETWLNELNTYCNKTDIIKMVVG 121
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
NK+D + R V+ +EG+ FAR + L+IE SAKT ++ CFEELV KI+ TP L
Sbjct: 122 NKIDLPN-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGL 175
>gi|17737369|ref|NP_523419.1| Rab10 [Drosophila melanogaster]
gi|194893373|ref|XP_001977864.1| GG19277 [Drosophila erecta]
gi|195345923|ref|XP_002039518.1| GM23016 [Drosophila sechellia]
gi|195482026|ref|XP_002101878.1| GE17866 [Drosophila yakuba]
gi|2317272|dbj|BAA21744.1| Rab10 [Drosophila melanogaster]
gi|7295615|gb|AAF50924.1| Rab10 [Drosophila melanogaster]
gi|16648398|gb|AAL25464.1| LD39986p [Drosophila melanogaster]
gi|190649513|gb|EDV46791.1| GG19277 [Drosophila erecta]
gi|194134744|gb|EDW56260.1| GM23016 [Drosophila sechellia]
gi|194189402|gb|EDX02986.1| GE17866 [Drosophila yakuba]
gi|220946172|gb|ACL85629.1| Rab10-PA [synthetic construct]
gi|220955946|gb|ACL90516.1| Rab10-PA [synthetic construct]
Length = 204
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 137/205 (66%), Gaps = 4/205 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D +RVV K+ G ARE+G F+E SAK+ +N+++ F EL ILD S E
Sbjct: 120 LGNKCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTS-GRE 178
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
++ ++ I ++ E S CC
Sbjct: 179 SAENQERVIIDRRNQEKAPGYSKCC 203
>gi|357122771|ref|XP_003563088.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 121/170 (71%), Gaps = 3/170 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
K D +RVV+ + FA E G F+E SAK +NV+Q F + I D
Sbjct: 122 KCDLTDKRVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKD 171
>gi|131785|sp|P22125.1|RAB1_DISOM RecName: Full=Ras-related protein ORAB-1
gi|213123|gb|AAA49234.1| GTP-binding protein [Discopyge ommata]
Length = 202
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 134/204 (65%), Gaps = 8/204 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLLAEG 186
K D +++VV FA G F+E SAK NV+Q F + +I P + G
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGG 181
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
S+ K N+ Q P ++ GCC
Sbjct: 182 SE--KSNVNIQSTP-VKSSGGGCC 202
>gi|326433258|gb|EGD78828.1| Rab1/RabD-family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 134/204 (65%), Gaps = 8/204 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKDSFENVKQ-WLQEIDRYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLLAEG 186
K D +++ V FA G F+E SAK NV+Q F + +I + P++ + G
Sbjct: 122 KSDLAAKKQVDYTTAKEFADSIGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPTMASGG 181
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
+K K KP +++ GCC
Sbjct: 182 AKKKDTLDIKAKPA---SSSGGCC 202
>gi|159795493|pdb|2RHD|A Chain A, Crystal Structure Of Cryptosporidium Parvum Small Gtpase
Rab1a
Length = 175
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ + + K +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT RD+F N+ W +EID Y+ ++ KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAM-ENVNKLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D S+RVVT EG A +G FIE SAK NV+Q F + +I
Sbjct: 123 KCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEI 170
>gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148230336|ref|NP_001080138.1| RAB1A, member RAS oncogene family [Xenopus laevis]
gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus laevis]
gi|49250530|gb|AAH74522.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 204
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 135/209 (64%), Gaps = 9/209 (4%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PS 181
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I P
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPG 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
A G +KN+ Q P ++ GCC
Sbjct: 180 ATAGGQ---EKNVKIQSTP-VKQSSGGCC 204
>gi|145508820|ref|XP_001440354.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833819|emb|CAI39368.1| rab_A22 [Paramecium tetraurelia]
gi|124407571|emb|CAK72957.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 138/207 (66%), Gaps = 9/207 (4%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAI 66
QQE+DYLFK+L+IG+S VGKSSLLL F + F E PTIGVDFK++ D+ GK +KL I
Sbjct: 4 QQEYDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQI 63
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERF+T+T+SYY+GA GII+VYDVT + +F ++ + W E++ Y+ N++ +++LV
Sbjct: 64 WDTAGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVEN-WLAEVEKYA-NENVVRVLV 121
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG 186
GNKVD ES+R VT +EG A FIE SAK NV++ F L +I + +A+
Sbjct: 122 GNKVDLESKREVTSEEGKELADSLNIRFIETSAKNSSNVEKAFITLANEI---KAKVAKS 178
Query: 187 SKGLKKNIFKQKPPEADAAA---SGCC 210
S+ + + P+ +GCC
Sbjct: 179 SEAIPVKTGPRITPDQQQNTVKDTGCC 205
>gi|307189424|gb|EFN73834.1| Ras-related protein Rab-18 [Camponotus floridanus]
Length = 224
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 127/187 (67%), Gaps = 3/187 (1%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAI 66
Q++ + K+L+IG+S VGKSS+LL FT D F E + T+G+D+K K + + G +KLAI
Sbjct: 3 QEDVLTILKILIIGESNVGKSSILLRFTEDEFCENMQSTVGMDYKTKQITIDGNTVKLAI 62
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRTLT SYYR QG I++YDVT R+TF L + W E++ Y D +K++V
Sbjct: 63 WDTAGQERFRTLTPSYYRDGQGAILMYDVTDRNTFVKL-ETWLNELNTYCNRTDIVKMVV 121
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG 186
GNK+D + R V+ +EG+ FAR + L+IE SAKT V+ CFEELV KI+ TP L
Sbjct: 122 GNKIDLPN-REVSTEEGLQFARRHQTLYIESSAKTADGVKCCFEELVQKIIQTPGLWDTH 180
Query: 187 SKGLKKN 193
S L N
Sbjct: 181 STRLYDN 187
>gi|350538277|ref|NP_001233823.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053063|gb|AAA80678.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ VD GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSRLLLRFADDSYLESYISTIGVDFKIRTVDQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV+ + FA E G F+E SAK NV+Q F + I + + +
Sbjct: 122 KCDLTAQKVVSTETAQAFADEIGIPFMETSAKNATNVEQAFMAMAASIKNRMASQPASNN 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ + P SGCC
Sbjct: 182 ARPPTVQIRGQPVNQ--KSGCC 201
>gi|327260900|ref|XP_003215271.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 203
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 131/205 (63%), Gaps = 4/205 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLA 65
+ Q+ DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL
Sbjct: 2 AAQQHDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLL
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLL 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
VGNK D +++VV FA G F+E SAK NV+Q F + +I A
Sbjct: 120 VGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGAT 179
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
K N+ Q P ++ GCC
Sbjct: 180 AGGAEKSNVKIQSTP-VKQSSGGCC 203
>gi|29841143|gb|AAP06156.1| SJCHGC02833 protein [Schistosoma japonicum]
gi|226468172|emb|CAX76313.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468174|emb|CAX76314.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468176|emb|CAX76315.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468178|emb|CAX76316.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472646|emb|CAX71009.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472648|emb|CAX71010.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472650|emb|CAX71011.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 132/202 (65%), Gaps = 8/202 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYLFKLL+IGDSGVGKS LL+ F ++F E TIGVDFK++ +D+ GK +KL IWD
Sbjct: 4 DYDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGAQGII+VYDVT + +F N+ W +EI+ Y+ N +LLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKS-WLQEIEHYA-NSTVNRLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D R V + +NFA+E+ F+E SAK +NV+ F E+ +I + + + S
Sbjct: 122 KCDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTAPMQSMSS 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ N + + GCC
Sbjct: 182 NVTVN-----STQPVTKSGGCC 198
>gi|417408915|gb|JAA50989.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 237
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 129/202 (63%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 39 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 98
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 99 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 156
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A
Sbjct: 157 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGG 216
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K N+ Q P + GCC
Sbjct: 217 AEKSNVKIQSTP-VKQSGGGCC 237
>gi|440907831|gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos grunniens mutus]
Length = 246
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 129/202 (63%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 48 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 107
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 108 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 165
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A
Sbjct: 166 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGG 225
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K N+ Q P + GCC
Sbjct: 226 AEKSNVKIQSTP-VKQSGGGCC 246
>gi|348538473|ref|XP_003456715.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 203
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGG 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G K N+ ++ GCC
Sbjct: 182 GEKPNVKLTPGTTVKTSSGGCC 203
>gi|221482114|gb|EEE20475.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 230
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 129/200 (64%), Gaps = 4/200 (2%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +KL IWDTA
Sbjct: 34 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTA 93
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT R++F N+ + W EID Y+ + KLLVGNK
Sbjct: 94 GQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKN-WMMEIDKYAM-EGVSKLLVGNKC 151
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D S+R VT +EG FA FIE SAK NV+Q F + +I + + S+
Sbjct: 152 DLTSKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARVQVNQQQSRP- 210
Query: 191 KKNIFKQKPPEADAAASGCC 210
N+ + +SGCC
Sbjct: 211 NANVRLGPSQPVRSVSSGCC 230
>gi|449267460|gb|EMC78403.1| Ras-related protein Rab-18-B, partial [Columba livia]
Length = 187
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/159 (59%), Positives = 116/159 (72%), Gaps = 3/159 (1%)
Query: 25 VGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYY 83
V SLLL FT FE +L PTIG+DFKVK + V G ++LAIWDTAGQERFRTLT SYY
Sbjct: 1 VSSRSLLLRFTGGGFEPKLKPTIGIDFKVKKMVVDGHAVQLAIWDTAGQERFRTLTPSYY 60
Query: 84 RGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEG 143
RGAQG+++VYDVTR++TFT L W E+D Y + +K+LVGNK DK +R V +KEG
Sbjct: 61 RGAQGVVLVYDVTRKETFTGLEG-WLNELDTYIAKNNTVKMLVGNKTDK-PDREVERKEG 118
Query: 144 INFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ FAR++ LFIE SAKT+ VQ FEEL KIL+TP +
Sbjct: 119 LQFARKHSLLFIETSAKTQDGVQCAFEELAAKILETPGV 157
>gi|383852551|ref|XP_003701790.1| PREDICTED: ras-related protein Rab-18-like [Megachile rotundata]
Length = 219
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
F ++ KLLMIG+S VGKSS++L FT D F E + T+G+D+K K + + G +KLAIWDT
Sbjct: 3 FYFVLKLLMIGESNVGKSSIILRFTEDEFYENMQSTVGMDYKTKQITIDGNMVKLAIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRTLT SYYR QG I+VYDVT R TF L + W E++ Y D +K++VGNK
Sbjct: 63 AGQERFRTLTPSYYRDGQGAILVYDVTDRVTFVKL-ETWLNELNTYCNKTDIVKMVVGNK 121
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+D + R V+ +EG+ FAR + L+IE SAKT ++ CFEELV KI+ TP L
Sbjct: 122 IDLPN-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGL 173
>gi|392559791|gb|EIW52975.1| ras-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 227
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 123/170 (72%), Gaps = 5/170 (2%)
Query: 16 KLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
KLL+IG+S VGKSSLLL F+ + + +E + TIGVDF+V ++V K++KL+IWDTAGQ
Sbjct: 15 KLLLIGNSSVGKSSLLLRFSDEQWLPEDESNATIGVDFRVHKMEVKSKRVKLSIWDTAGQ 74
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRT+TSSYYRGAQGII+VYDV R++F L W E++ Y + +K++VGNKVDK
Sbjct: 75 ERFRTITSSYYRGAQGIILVYDVANRESFEALPR-WFSELETY-VSSSVVKIIVGNKVDK 132
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
E R V+ EG FA G LFIE SAKT V V+ F ++V +I+DTP L
Sbjct: 133 EYSRQVSTAEGQAFATRMGALFIEASAKTAVGVEDAFRDVVARIIDTPEL 182
>gi|206553|gb|AAA42006.1| ras protein [Rattus norvegicus]
Length = 205
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 131/207 (63%), Gaps = 4/207 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNEKNVEQSFMTMAAEIKKRMGPG 179
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A K N+ Q P + GCC
Sbjct: 180 ATAGGAEKSNVKIQSTP-VKQSGGGCC 205
>gi|410900346|ref|XP_003963657.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
gi|312987462|gb|ADR31264.1| Rab1 [Sciaenops ocellatus]
Length = 203
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGG 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G K N+ ++ GCC
Sbjct: 182 GEKPNVKLTPGTTVKPSSGGCC 203
>gi|72535190|ref|NP_001026957.1| ras-related protein Rab-1A [Sus scrofa]
gi|75056559|sp|Q52NJ2.3|RAB1A_PIG RecName: Full=Ras-related protein Rab-1A
gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa]
Length = 205
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 130/207 (62%), Gaps = 4/207 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT + +F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A K N+ Q P + GCC
Sbjct: 180 ATAGGAEKSNVKIQSTP-VKQSGGGCC 205
>gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens]
Length = 257
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 129/202 (63%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 59 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 118
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 119 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 176
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A
Sbjct: 177 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGG 236
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K N+ Q P + GCC
Sbjct: 237 AEKSNVKIQSTP-VKQSGGGCC 257
>gi|357122765|ref|XP_003563085.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 132/203 (65%), Gaps = 7/203 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV+ + FA E G F+E SAK +NV+Q F + I D + +
Sbjct: 122 KSDLTDKKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANN 181
Query: 189 GLKKNI-FKQKPPEADAAASGCC 210
+ + +P E A+ CC
Sbjct: 182 ARPATVQIRGQPVEQKAS---CC 201
>gi|166235969|gb|ABY85791.1| GTPase Rab1 [Larix kaempferi]
Length = 203
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 132/203 (65%), Gaps = 6/203 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT D+F N+ W EID Y+++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQ-WLSEIDKYASDS-VSKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-LDTPSLLAEGS 187
K D +RVV ++ +FA E G F+E SAK NV+Q F + ++ S L EG+
Sbjct: 122 KCDMTEKRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQLTEGN 181
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
+ K N + K CC
Sbjct: 182 R--KANTIEMKGQPLPQRGGSCC 202
>gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta vulgaris]
Length = 202
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 121/169 (71%), Gaps = 3/169 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
Q++DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IW
Sbjct: 3 QDYDYLFKLLLIGDSGVGKSCLLLRFADDSYVESYISTIGVDFKIRTVEQDGKTIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GII+VYDVT + +F N+ W EID Y+++ + +K+LVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQQSFDNVKQ-WLNEIDRYASD-NVVKILVG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
NK D S +VV+ + FA E G F+E SAK NV+Q F + +I
Sbjct: 121 NKSDLTSNKVVSSETAKAFADEIGIPFLETSAKNSTNVEQAFMTMAAEI 169
>gi|148298847|ref|NP_001091822.1| small GTP-binding protein Rab10 [Bombyx mori]
gi|111608111|gb|ABH10799.1| small GTP-binding protein Rab10 [Bombyx mori]
Length = 203
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 134/205 (65%), Gaps = 5/205 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ ++F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF ++ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D E +RVV+K+ G ARE+G F+E SAK +N+ + F EL ILD +
Sbjct: 120 LGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTA--GR 177
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
+ I ++ P + CC
Sbjct: 178 EADADHSRIAVERRPSRAPPSRACC 202
>gi|340713998|ref|XP_003395520.1| PREDICTED: ras-related protein Rab-1A-like [Bombus terrestris]
gi|350418865|ref|XP_003491994.1| PREDICTED: ras-related protein Rab-1A-like [Bombus impatiens]
gi|380024902|ref|XP_003696227.1| PREDICTED: ras-related protein Rab-1A-like [Apis florea]
Length = 206
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 133/209 (63%), Gaps = 7/209 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T ++TF N+ W +EID Y+ + + K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELV--LKILDTPS 181
LLVGNK D +++VV +A + G F+E SAK +NV+Q F + +K+ P
Sbjct: 120 LLVGNKCDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPP 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
K I +P E ++ SGCC
Sbjct: 180 SSGNSDPANKVKIEHGRPIE--SSKSGCC 206
>gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus]
Length = 205
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 131/207 (63%), Gaps = 4/207 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAG+ERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGEERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A K N+ Q P + GCC
Sbjct: 180 ATAGGAEKSNVKIQSTP-VKQSGGGCC 205
>gi|302787773|ref|XP_002975656.1| rab family GTPase [Selaginella moellendorffii]
gi|300156657|gb|EFJ23285.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 133/197 (67%), Gaps = 9/197 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLA 184
K D +++VV + FA E G F+E SAK NV+Q F E+ ++ PS+ A
Sbjct: 122 KCDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPSMSA 181
Query: 185 --EGSKGLKKNIFKQKP 199
+ L+ + + KP
Sbjct: 182 AKPTTIPLRGQVLQHKP 198
>gi|367461227|gb|AEX14567.1| small GTP-binding protein [Dunaliella salina]
Length = 203
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 130/205 (63%), Gaps = 9/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ VD+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLDGKVVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TS YYRGA GII+VYDVT ++F N+ W EID Y+ N++ KLLVGN
Sbjct: 64 TAGQERFRTITSGYYRGAHGIIVVYDVTDMESFNNVK-TWLNEIDRYA-NENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S+R V + FA E G F+E SAK+ NV+Q F + +I + +A +
Sbjct: 122 KNDLTSKRAVDYQTAKAFADEIGIPFLETSAKSSTNVEQAFMTMAAEI---KNRMASQTM 178
Query: 189 GLKKNIFKQKPPEADAAA---SGCC 210
K +P E + S CC
Sbjct: 179 AAKPGAATIRPGEGKPISDNRSTCC 203
>gi|197127906|gb|ACH44404.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 133/207 (64%), Gaps = 4/207 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A K N+ K + + ++ GCC
Sbjct: 180 ATAGGAEKSNV-KIQSTKVKQSSGGCC 205
>gi|449458992|ref|XP_004147230.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
gi|449517559|ref|XP_004165813.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
Length = 202
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 133/208 (63%), Gaps = 18/208 (8%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + +VV+ + FA E G F+E SAK+ NV+Q F + +I ++
Sbjct: 122 KSDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEI---------KNR 172
Query: 189 GLKKNIFKQKPPEADAAA------SGCC 210
+ + +PP SGCC
Sbjct: 173 MATQPMNNARPPTVQIRGQPVNQKSGCC 200
>gi|392875748|gb|AFM86706.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 135/209 (64%), Gaps = 8/209 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S E+ YLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 STMNPEYGYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PS 181
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I P
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPG 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
+ GS+ K N+ Q P +++ GCC
Sbjct: 180 ATSGGSE--KSNVNIQSTP-VKSSSGGCC 205
>gi|322786717|gb|EFZ13086.1| hypothetical protein SINV_00792 [Solenopsis invicta]
Length = 206
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 133/209 (63%), Gaps = 7/209 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T ++TF N+ W +EID Y+ + + K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELV--LKILDTPS 181
LLVGNK D +++VV +A + G F+E SAK +NV+Q F + +K+ P
Sbjct: 120 LLVGNKCDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPP 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
K I +P E ++ SGCC
Sbjct: 180 SSGASDPANKVKIEHGRPIE--SSKSGCC 206
>gi|440892898|gb|ELR45890.1| Ras-related protein Rab-13, partial [Bos grunniens mutus]
Length = 205
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 131/200 (65%), Gaps = 11/200 (5%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLK 63
SA + +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+K
Sbjct: 1 SAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIK 60
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L +WDTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +
Sbjct: 61 LQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVER 118
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LL+GNK D E++R V K++ ARE+G F E SAK+ +NV + F L I LL
Sbjct: 119 LLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI-----LL 173
Query: 184 AEGSKGLKKNIFKQKPPEAD 203
G + LK N KPP D
Sbjct: 174 KSGGRRLKNN---NKPPSTD 190
>gi|289741231|gb|ADD19363.1| Rab protein 10 [Glossina morsitans morsitans]
Length = 204
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 138/205 (67%), Gaps = 4/205 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D +RVV+K+ G ARE+G F+E SAK+ +N+++ F EL ILD + E
Sbjct: 120 LGNKCDMADKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTA-GRE 178
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
++ ++ + ++ E A CC
Sbjct: 179 SAENPERVVVDRRNNEKAPAYKSCC 203
>gi|74193229|dbj|BAE20616.1| unnamed protein product [Mus musculus]
Length = 201
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 131/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLLMIGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLMIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A+ GCC
Sbjct: 181 GERPNLKIDSTP-VKPASGGCC 201
>gi|390339812|ref|XP_003725089.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Strongylocentrotus
purpuratus]
Length = 201
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 133/205 (64%), Gaps = 7/205 (3%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ LL F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCLLFRFSDDTFSTTFISTIGIDFKIKTVELNGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T+ TF N++ W + I ++ N+D K+L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAK-WLRNIQEHA-NEDVEKML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D + +R++ K G A+E G F+E SAK +NV+Q F L IL
Sbjct: 120 LGNKCDMDDKRMINKDRGETIAKENGIKFMETSAKANINVEQAFMTLAADILKKYPQRDT 179
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
GS G+ K K E ++ S CC
Sbjct: 180 GSPGVVKPDMK----EGSSSGSKCC 200
>gi|256071955|ref|XP_002572303.1| rab-18 [Schistosoma mansoni]
gi|353229802|emb|CCD75973.1| putative rab-18 [Schistosoma mansoni]
Length = 211
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 133/201 (66%), Gaps = 7/201 (3%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDV-GGKKLKLAIWDTAGQ 72
FKLL+IGDSGVGKSSLL+ +T+D FE +LS TIGVDFKVK+V V G K+KL+IWDTAGQ
Sbjct: 12 FKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKHVTVPDGTKIKLSIWDTAGQ 71
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRTLT + YRG+ + V+DV+ R++F +L+ W +E+ YS N D IKLLVGNK+D
Sbjct: 72 ERFRTLTPNVYRGSHAAVFVFDVSNRESFDHLNS-WMEELKTYSDNPDMIKLLVGNKIDN 130
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKK 192
S R ++++EG+ F+R Y + E SAKT V Q F ++V +I + L +G K
Sbjct: 131 IS-REISREEGLRFSRLYNMPYAETSAKTSEGVNQLFSDVVTRIYNHSELWNQGKKRANT 189
Query: 193 NIFKQKP---PEADAAASGCC 210
N + E S CC
Sbjct: 190 NSSSRAHLTELEDKQTRSSCC 210
>gi|66811592|ref|XP_639975.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74854016|sp|Q54NU2.1|RAB1D_DICDI RecName: Full=Ras-related protein Rab-1D
gi|60466912|gb|EAL64956.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 204
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWD 68
E D+ FK+L+IGDSGVGKS LLL F D++ + TIGVDFK+K +++ GK +KL IWD
Sbjct: 6 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 65
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGAQGII+VYD T +D+FTN+ W EID Y+ ++ KLLVGN
Sbjct: 66 TAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQ-WMGEIDRYAC-ENVNKLLVGN 123
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +E+VV + +FA YG FIE SAK NV++CF + I + + + E K
Sbjct: 124 KTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLADIQETPK 183
Query: 189 GLKKNIFKQKPPEADAAASGC 209
+ +I + ++ S C
Sbjct: 184 PDEVDIKSKNKTKSGGKKSFC 204
>gi|48103887|ref|XP_392903.1| PREDICTED: ras-related protein Rab-18-B [Apis mellifera]
Length = 223
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 122/175 (69%), Gaps = 3/175 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIW 67
Q+ + KLLMIG+S VGKSS++L FT D F E + T+G+D++ K V + G +KLAIW
Sbjct: 5 QDVLTVLKLLMIGESNVGKSSIILRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLAIW 64
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRTLT SYYR QG I+VYDVT R TF L + W E++ Y D IK++VG
Sbjct: 65 DTAGQERFRTLTPSYYRDGQGAILVYDVTDRVTFMKL-ETWLNELNTYCNKTDIIKMVVG 123
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
NK+D + R V+ +EG+ FAR + L+IE SAKT ++ CFEELV KI+ TP L
Sbjct: 124 NKIDLPN-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGL 177
>gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500073|sp|Q39571.1|YPTC1_CHLRE RecName: Full=GTP-binding protein YPTC1
gi|806724|gb|AAA82727.1| YptC1 [Chlamydomonas reinhardtii]
gi|78522571|gb|ABB46195.1| YptC1 [Chlamydomonas incerta]
gi|158270765|gb|EDO96600.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 203
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 132/202 (65%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S++VV FA E G F+E SAK NV+Q F + +I + + +K
Sbjct: 122 KSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTK 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ Q+ ++ +S CC
Sbjct: 182 AGGPVVRPQEGKPINSKSSSCC 203
>gi|162458854|ref|NP_001105441.1| GTP-binding protein YPTM2 [Zea mays]
gi|466172|sp|Q05737.1|YPTM2_MAIZE RecName: Full=GTP-binding protein YPTM2
gi|287835|emb|CAA44919.1| yptm2 [Zea mays]
Length = 203
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 119/170 (70%), Gaps = 3/170 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
K D + +VV + FA E G F+E SAK NVQQ F + I D
Sbjct: 122 KSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKD 171
>gi|380023930|ref|XP_003695762.1| PREDICTED: ras-related protein Rab-18-B-like [Apis florea]
Length = 223
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 122/175 (69%), Gaps = 3/175 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIW 67
Q+ + KLLMIG+S VGKSS++L FT D F E + T+G+D++ K V + G +KLAIW
Sbjct: 5 QDVLTVLKLLMIGESNVGKSSIILRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLAIW 64
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRTLT SYYR QG I+VYDVT R TF L + W E++ Y D IK++VG
Sbjct: 65 DTAGQERFRTLTPSYYRDGQGAILVYDVTDRITFMKL-ETWLNELNTYCNKTDIIKMVVG 123
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
NK+D + R V+ +EG+ FAR + L+IE SAKT ++ CFEELV KI+ TP L
Sbjct: 124 NKIDLPN-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGL 177
>gi|340503618|gb|EGR30169.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 210
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 122/170 (71%), Gaps = 3/170 (1%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAI 66
QQ++DYLFKLL+IG+S VGKSSLLL F+ + F E PTIGVDFK++ D+ GK +KL I
Sbjct: 4 QQDYDYLFKLLLIGNSSVGKSSLLLRFSDNIFNECFLPTIGVDFKIRTFDIQGKAVKLQI 63
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERF+T+TSSYY+GA GII+VYD+T R TF ++ D W E D + N++ +KLLV
Sbjct: 64 WDTAGQERFKTITSSYYKGAHGIILVYDITDRQTFKDI-DNWLAEAD-KNANENVVKLLV 121
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
GNK+D E++R V+ EG A G FIE SA T NV+ F L +I
Sbjct: 122 GNKIDLENKRQVSFDEGKELADSLGIKFIETSALTANNVENAFVTLATEI 171
>gi|392596085|gb|EIW85408.1| GTP-binding protein ypt1 [Coniophora puteana RWD-64-598 SS2]
Length = 203
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 131/203 (64%), Gaps = 6/203 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT DTF+N+ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S++VV FA + F+E SAK NV+Q F + +I D + +
Sbjct: 123 KSDLTSKKVVEYSVAKEFADQLTIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPAG 182
Query: 189 GLKKNIFKQKPPEA-DAAASGCC 210
G K P ++ +SGCC
Sbjct: 183 GAKSTTI--TPGQSVQQQSSGCC 203
>gi|346467655|gb|AEO33672.1| hypothetical protein [Amblyomma maculatum]
Length = 235
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 120/172 (69%), Gaps = 3/172 (1%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL
Sbjct: 55 AMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKL 114
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KL
Sbjct: 115 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKL 172
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
LVGNK D + +VV+ + G FA E G F+E AK NV+Q F + I
Sbjct: 173 LVGNKSDLTANKVVSYETGKAFADEIGIPFMETGAKNATNVEQAFMAMAADI 224
>gi|326493844|dbj|BAJ85384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 131/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D RVV+ + G A E G F+E SAK NV++ F + +I + + G+
Sbjct: 122 KCDLAESRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMASQPAGNA 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ + P A +GCC
Sbjct: 182 SKPATVQMRGQPVAQ--QNGCC 201
>gi|145348815|ref|XP_001418839.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|308805733|ref|XP_003080178.1| YptC1 (ISS) [Ostreococcus tauri]
gi|116058638|emb|CAL54345.1| YptC1 (ISS) [Ostreococcus tauri]
gi|144579069|gb|ABO97132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTGTYISTIGVDFKIRTVELEGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F + W EID Y+ N++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDMESFEAVKG-WLNEIDRYA-NENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S++VV FA E G FIE SAK NV+Q F + +I + + + +
Sbjct: 122 KSDLTSQKVVDYATAKAFADEIGIPFIETSAKNATNVEQAFMTMANEIKNRMASQPQMNA 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N + + A S CC
Sbjct: 182 GPRGNTVRPGEGRSVNAKSSCC 203
>gi|440548634|gb|AGC10822.1| Rab-1 [Eriocheir sinensis]
Length = 204
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 132/210 (62%), Gaps = 11/210 (5%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EID Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDTTDQESFNNVKQ-WLQEIDRYAC-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTP 180
LLVGN+ D ++VV + +A G F+E SAK NV+Q F + +I + P
Sbjct: 120 LLVGNQCDLTHKKVVDYQTAKEYADSLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPP 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
S A GS G+K N P GCC
Sbjct: 180 S--APGSAGVKIN---PSVPVEPQPGGGCC 204
>gi|116782376|gb|ABK22484.1| unknown [Picea sitchensis]
Length = 202
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 134/203 (66%), Gaps = 7/203 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT D+F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQ-WLSEIDKYASD-NVSKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-LDTPSLLAEGS 187
K D +RVV ++ +FA E G F+E SAK NV+Q F + ++ S L EG+
Sbjct: 122 KCDMAEKRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFITMAGEVKRRMASQLTEGN 181
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
+ K +P + + CC
Sbjct: 182 RKTNTVEMKGQPLQQKGS---CC 201
>gi|170579409|ref|XP_001894818.1| Ras-related protein Rab-18A [Brugia malayi]
gi|158598441|gb|EDP36329.1| Ras-related protein Rab-18A, putative [Brugia malayi]
Length = 194
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 121/169 (71%), Gaps = 9/169 (5%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSL+L F D F+ E++ TIGVDF+V + V + DTAGQE
Sbjct: 11 LKILIIGESGVGKSSLMLRFVDDTFDPEIAATIGVDFRVTSMMVNQNR------DTAGQE 64
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I VYDV+ R TF LS W E+D YST D +K+L+GNK+D
Sbjct: 65 RFRTLTPSYYRGAQGVICVYDVSNRQTFERLSH-WMNEVDTYSTKTDAVKMLIGNKIDI- 122
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
S R VT++EG+ FA+++ LFIE SAKTR VQ FEEL+ K+L TP L
Sbjct: 123 SSREVTREEGLEFAKKHRMLFIEASAKTREGVQCAFEELIEKVLQTPGL 171
>gi|51468996|emb|CAH17998.1| RAB1-like [Poa pratensis]
Length = 203
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 121/170 (71%), Gaps = 3/170 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
K D ++VV+ + FA E G F+E SAK +NV+Q F + I D
Sbjct: 122 KCDLTDKKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKD 171
>gi|226486|prf||1515250A rab1B protein
Length = 201
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 132/202 (65%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTVTSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P +A+ GCC
Sbjct: 181 GERPNLKIDSTP-VKSASGGCC 201
>gi|356568583|ref|XP_003552490.1| PREDICTED: ras-related protein RABD2a-like [Glycine max]
Length = 202
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 129/203 (63%), Gaps = 8/203 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPSLLAEGS 187
K D E+ R V+ + FA E G F+E SAK NV+Q F + I D S A +
Sbjct: 122 KCDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKDRMASQPANNA 181
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
+ I Q A GCC
Sbjct: 182 RPPTVQIRGQPV----AQKGGCC 200
>gi|357135226|ref|XP_003569212.1| PREDICTED: ras-related protein RIC1-like [Brachypodium distachyon]
Length = 203
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 132/202 (65%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D RVV+ + G A E G F+E SAK NV++ F + +I + + ++ +
Sbjct: 122 KCDLAESRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKN--RMASQPAA 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K Q + A +GCC
Sbjct: 180 NASKPATVQMRGQPVAQQNGCC 201
>gi|75077202|sp|Q4R8X3.1|RAB1B_MACFA RecName: Full=Ras-related protein Rab-1B
gi|67967932|dbj|BAE00448.1| unnamed protein product [Macaca fascicularis]
Length = 201
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT R+++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A GCC
Sbjct: 181 GERPNLKIDSTP-VKPAGGGCC 201
>gi|55742328|ref|NP_001007162.1| ras-related protein Rab-1A [Danio rerio]
gi|29571131|gb|AAH50239.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|38541759|gb|AAH62857.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|182889992|gb|AAI65910.1| Rab1a protein [Danio rerio]
Length = 201
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 133/205 (64%), Gaps = 11/205 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLLAEG 186
K D +++VV FA G F+E SAK NV+Q F + +I P A G
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGG 181
Query: 187 S-KGLKKNIFKQKPPEADAAASGCC 210
S K +K KP A+ GCC
Sbjct: 182 SEKTMKIESTPVKP-----ASGGCC 201
>gi|417408724|gb|JAA50900.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 131/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 17 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 76
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 77 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 134
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 135 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 193
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A SGCC
Sbjct: 194 GERPNLKIDSTP-VKQAGSGCC 214
>gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis]
Length = 203
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 135/206 (65%), Gaps = 12/206 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKMIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EI+ Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEINRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLA 184
K D + RVV+ + G +FA G F+E SAK NV++ F E+ ++ P+L
Sbjct: 122 KCDLTTRRVVSYQTGKDFADSLGIPFLETSAKNATNVEEAFMTMASEIKKRMASQPALNT 181
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
S + + PP+ +GCC
Sbjct: 182 GKSGTVNVGGSQPIPPK-----TGCC 202
>gi|91087113|ref|XP_975150.1| PREDICTED: similar to Rab-protein 1 CG3320-PA [Tribolium castaneum]
gi|270010550|gb|EFA06998.1| hypothetical protein TcasGA2_TC009965 [Tribolium castaneum]
Length = 202
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 135/205 (65%), Gaps = 10/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD T +D+F N+ W +EID Y+ + + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDCTDQDSFNNVKQ-WLEEIDRYACD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTPSLLAE 185
K D +++VV +A + G F+E SAK NV+Q F + +I + PS A+
Sbjct: 122 KSDLTTKKVVDYTTAKEYADQLGIPFLETSAKNASNVEQAFMTMAAEIKNRVGPPSSAAD 181
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
+ +K I + +P E SGCC
Sbjct: 182 QASKVK--IDQGRPIE--TTKSGCC 202
>gi|308081088|ref|NP_001183566.1| uncharacterized protein LOC100502159 [Zea mays]
gi|194700886|gb|ACF84527.1| unknown [Zea mays]
gi|238013122|gb|ACR37596.1| unknown [Zea mays]
gi|413923310|gb|AFW63242.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
gi|413938043|gb|AFW72594.1| hypothetical protein ZEAMMB73_730860 [Zea mays]
Length = 203
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
K D + +VV + FA E G F+E SAK +NV+Q F + I D
Sbjct: 122 KSDLTANKVVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASIKD 171
>gi|117939063|dbj|BAF36685.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 190
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 126/195 (64%), Gaps = 6/195 (3%)
Query: 17 LLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERF 75
LL+IGDSGVGKS LLL F D + TIGVDFK++ + +GGK +KL IWDTAGQ+RF
Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYSGTYIATIGVDFKIRTIQIGGKVIKLQIWDTAGQDRF 60
Query: 76 RTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESE 135
RT+TSSYYRGA GII+VYDVT RD+F N+ +W KEI+ Y+T C +LLVGNK D ++
Sbjct: 61 RTITSSYYRGANGIIIVYDVTNRDSFNNVQ-MWVKEIESYATEGVC-RLLVGNKCDLVNK 118
Query: 136 RVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKNIF 195
+VV G A +G F+E SAK NV+Q F+ + +I+ + +G G K +
Sbjct: 119 KVVDYNTGKQLADSFGISFLETSAKNATNVEQAFQTMATEIMKHTAPRNDGPIGTKVEVL 178
Query: 196 KQKPPEADAAASGCC 210
PP + GCC
Sbjct: 179 ---PPSEVKSEGGCC 190
>gi|307198018|gb|EFN79078.1| Ras-related protein Rab-1A [Harpegnathos saltator]
Length = 206
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 133/209 (63%), Gaps = 7/209 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T ++TF N+ W +EID Y+ + + K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELV--LKILDTPS 181
LLVGNK D +++VV +A + G F+E SAK +NV+Q F + +K+ P
Sbjct: 120 LLVGNKCDLHTKKVVDYTIAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPP 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
K I +P E ++ SGCC
Sbjct: 180 SSGASDPANKVKIEHGRPIE--SSKSGCC 206
>gi|326506468|dbj|BAJ86552.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516366|dbj|BAJ92338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
K D +R V+ + FA E G F+E SAK +NV+Q F + I D
Sbjct: 122 KCDLADKRAVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMAASIKD 171
>gi|302782443|ref|XP_002972995.1| rab family GTPase [Selaginella moellendorffii]
gi|302805428|ref|XP_002984465.1| rab family GTPase [Selaginella moellendorffii]
gi|300147853|gb|EFJ14515.1| rab family GTPase [Selaginella moellendorffii]
gi|300159596|gb|EFJ26216.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 121/168 (72%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELEGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D +++VV + FA E G F+E SAK NV+Q F + +I
Sbjct: 122 KADLTAKKVVDTQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|183235021|ref|XP_649033.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169800780|gb|EAL43647.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709560|gb|EMD48804.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 199
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 131/203 (64%), Gaps = 7/203 (3%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
QEFDYLFK+LMIGDSGVGKS LLL F+ D F + TIGVDFK+K + + G+ +KL IW
Sbjct: 3 QEFDYLFKILMIGDSGVGKSCLLLRFSDDVFSDTYITTIGVDFKIKTLKINGRDIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GII+VYDVT +F ++ W EI+ + + + +K+L+G
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIVVYDVTDVQSFNHIRQ-WLNEIE-GNASPNVVKMLIG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK DK++ + V+ ++ FA++ G F E SAK +NV+ F EL D + + E
Sbjct: 121 NKADKDATKAVSTEQAAEFAKQEGMKFFETSAKQSINVEAAFLELA---QDIKNQMKETP 177
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
+ N+ KP GCC
Sbjct: 178 RVTPDNV-AIKPEVQQEPQPGCC 199
>gi|50550177|ref|XP_502561.1| YALI0D08162p [Yarrowia lipolytica]
gi|49648429|emb|CAG80749.1| YALI0D08162p [Yarrowia lipolytica CLIB122]
Length = 202
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 130/202 (64%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTLELEGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +DTF N+ W EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFNNVK-TWFHEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV FA G F+E SAK NV+Q F + +I + AE +
Sbjct: 122 KSDITDKKVVEYTVAKEFADSLGIPFLETSAKNATNVEQAFLTMARQIKERMGGAAENTA 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K N+ + + ++S CC
Sbjct: 182 A-KANVNLRGQNVSQGSSSSCC 202
>gi|112983246|ref|NP_001037010.1| small GTP-binding protein [Bombyx mori]
gi|2338554|gb|AAB67169.1| small GTP-binding protein [Bombyx mori]
Length = 202
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 132/205 (64%), Gaps = 10/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ VD+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD T +D+F+N+ W +EID Y+ + + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEIDRYACD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTPSLLAE 185
K D +++VV +A + G F+E SAK NV+Q F + +I + PS A
Sbjct: 122 KCDLTTKKVVDFSTAKQYAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARVGPPSTGAA 181
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
+ +K Q P D S CC
Sbjct: 182 PAGHVK---IDQGQP-IDTGKSSCC 202
>gi|226468180|emb|CAX76317.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 131/202 (64%), Gaps = 8/202 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYLFKLL+IGDSGVGKS LL+ F ++F E TIGVDFK++ +D+ GK +KL IWD
Sbjct: 4 DYDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGAQGII+VYDVT + +F N+ W +EI+ Y+ N +LLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKS-WLQEIEHYA-NSTVNRLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D R V + +NFA+E+ F+E SAK +NV+ F E+ +I + + +
Sbjct: 122 KCDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTAPMQSMPS 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ N + + GCC
Sbjct: 182 NVTVN-----STQPVTKSGGCC 198
>gi|326914865|ref|XP_003203743.1| PREDICTED: ras-related protein Rab-1A-like [Meleagris gallopavo]
Length = 231
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 132/208 (63%), Gaps = 4/208 (1%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKL 62
+ A + +DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +
Sbjct: 27 TEAGKGFYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI 86
Query: 63 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCI 122
KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++
Sbjct: 87 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVN 144
Query: 123 KLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
KLLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 145 KLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGP 204
Query: 183 LAEGSKGLKKNIFKQKPPEADAAASGCC 210
A K N+ Q P ++ GCC
Sbjct: 205 GATAGGAEKSNVKIQSTP-VKQSSGGCC 231
>gi|413938044|gb|AFW72595.1| hypothetical protein ZEAMMB73_730860, partial [Zea mays]
Length = 207
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 120/171 (70%), Gaps = 3/171 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
Q FDYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IW
Sbjct: 7 QIFDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIW 66
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVG
Sbjct: 67 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVG 124
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
NK D + +VV + FA E G F+E SAK +NV+Q F + I D
Sbjct: 125 NKSDLTANKVVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASIKD 175
>gi|291220707|ref|XP_002730366.1| PREDICTED: RAB10, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 200
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 135/205 (65%), Gaps = 7/205 (3%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T+ TF N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITQPKTFDNITK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D E +R++ K+ G + ARE+G F+E SAK+ VNV++ F L IL
Sbjct: 120 LGNKCDMEDKRMIPKERGESIAREHGIKFLETSAKSNVNVEKAFMTLAEDILRKTPQKDS 179
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
++ K E + SGCC
Sbjct: 180 NPDSSSVSVHK----ETSSRKSGCC 200
>gi|302794149|ref|XP_002978839.1| rab family GTPase [Selaginella moellendorffii]
gi|300153648|gb|EFJ20286.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 133/197 (67%), Gaps = 9/197 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLA 184
K D +++VV + FA E G F+E SAK NV+Q F E+ ++ PS+ +
Sbjct: 122 KCDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPSMSS 181
Query: 185 --EGSKGLKKNIFKQKP 199
+ L+ + + KP
Sbjct: 182 AKPTTIPLRGQVLQHKP 198
>gi|358253006|dbj|GAA51290.1| Ras-related protein Rab-18 [Clonorchis sinensis]
Length = 215
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 141/217 (64%), Gaps = 9/217 (4%)
Query: 1 MDSSSASQQEFDYL--FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDV 57
M+ S +Q+F + FKLL+IGDSGVGKSSLLL + +D+FE +S TIGVD++VK V
Sbjct: 1 MEQSFHPKQDFGEVVNFKLLVIGDSGVGKSSLLLRYINDSFEARVSATIGVDYRVKVTTV 60
Query: 58 G-GKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYS 116
G +KL+IWDTAGQERFRTLT ++YRGA G I+VYDV+ R +F LS+ W +E+ +S
Sbjct: 61 PDGTMIKLSIWDTAGQERFRTLTPNFYRGAHGAIIVYDVSNRGSFDRLSN-WMEELKTFS 119
Query: 117 TNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
++ D +++LVGNK+D R VT++EG+ +AR + + E SAKT V F +LV +I
Sbjct: 120 SHHDMVRMLVGNKID-HIPRQVTREEGLRYARMFNMPYAETSAKTSEGVNSVFSDLVQRI 178
Query: 177 LDTPSLLAEGSK---GLKKNIFKQKPPEADAAASGCC 210
P L S+ G++ + + + +GCC
Sbjct: 179 YTIPHLWDPDSRHRPGMRHASSRLQLNHNRRSGNGCC 215
>gi|192910784|gb|ACF06500.1| Ras-related protein RIC1 [Elaeis guineensis]
Length = 202
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 121/168 (72%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D + RVV+ + G FA E G F+E SAK NV++ F + +I
Sbjct: 122 KCDLAANRVVSYETGKAFADEIGIPFLETSAKDATNVEKAFMTMAAEI 169
>gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|113531733|dbj|BAF04116.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|125524668|gb|EAY72782.1| hypothetical protein OsI_00645 [Oryza sativa Indica Group]
gi|125569264|gb|EAZ10779.1| hypothetical protein OsJ_00614 [Oryza sativa Japonica Group]
gi|215697672|dbj|BAG91666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765495|dbj|BAG87192.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
K D + +VV+ + FA E G F+E SAK NV+Q F + I D
Sbjct: 122 KSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKD 171
>gi|384247689|gb|EIE21175.1| GTP-binding protein YPTC1 [Coccomyxa subellipsoidea C-169]
Length = 202
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 120/168 (71%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ N++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYA-NENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D +++VV + FA E G F+E SAK NV+Q F + +I
Sbjct: 122 KSDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|297599697|ref|NP_001047606.2| Os02g0653800 [Oryza sativa Japonica Group]
gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza sativa]
gi|49387522|dbj|BAD24987.1| putative GTP-binding protein YPTM2 [Oryza sativa Japonica Group]
gi|215769313|dbj|BAH01542.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623360|gb|EEE57492.1| hypothetical protein OsJ_07768 [Oryza sativa Japonica Group]
gi|255671140|dbj|BAF09520.2| Os02g0653800 [Oryza sativa Japonica Group]
Length = 203
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
K D + +VV+ + FA E G F+E SAK NV+Q F + I D
Sbjct: 122 KSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKD 171
>gi|336367724|gb|EGN96068.1| hypothetical protein SERLA73DRAFT_141217 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380437|gb|EGO21590.1| hypothetical protein SERLADRAFT_396608 [Serpula lacrymans var.
lacrymans S7.9]
Length = 204
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/185 (54%), Positives = 125/185 (67%), Gaps = 9/185 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD------TPSL 182
K D S++VV FA + F+E SAK NV+Q F + +I D TPS
Sbjct: 123 KSDLTSKKVVEYSVAKEFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPSG 182
Query: 183 LAEGS 187
A+ S
Sbjct: 183 AAKSS 187
>gi|341886829|gb|EGT42764.1| hypothetical protein CAEBREN_29398 [Caenorhabditis brenneri]
Length = 201
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 132/202 (65%), Gaps = 8/202 (3%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTA
Sbjct: 5 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 64
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYD+T ++TF N+ W +EID Y+ ++ KLLVGNK
Sbjct: 65 GQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ-WLQEIDRYAC-ENVNKLLVGNKC 122
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLLAEGSK 188
D ++R V + ++A + G F+E SAK+ NV+Q F + +I P A G+
Sbjct: 123 DLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGAGGAP 182
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G++ P D + GCC
Sbjct: 183 GVR---ITGSQPVQDKKSGGCC 201
>gi|307171708|gb|EFN63443.1| Ras-related protein Rab-10 [Camponotus floridanus]
Length = 200
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 124/173 (71%), Gaps = 3/173 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
+GNK D E +RVV+ ++G ARE+G F+E SAK +N+ + F EL ILD
Sbjct: 120 LGNKSDMEEKRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILD 172
>gi|158341664|ref|NP_001103449.1| ras-related protein Rab-1B [Rattus norvegicus]
gi|293332049|ref|NP_001168820.1| uncharacterized protein LOC100382625 [Zea mays]
gi|392343176|ref|XP_002727643.2| PREDICTED: ras-related protein Rab-1B-like [Rattus norvegicus]
gi|149042337|gb|EDL96044.1| rCG63295 [Rattus norvegicus]
gi|149062037|gb|EDM12460.1| rCG48149, isoform CRA_b [Rattus norvegicus]
gi|223973195|gb|ACN30785.1| unknown [Zea mays]
Length = 201
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 132/202 (65%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P +A+ GCC
Sbjct: 181 GERPNLKIDSTP-VKSASGGCC 201
>gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus]
Length = 253
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 130/207 (62%), Gaps = 4/207 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 50 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 109
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 110 LQRWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 167
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 168 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 227
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A K N+ Q P + GCC
Sbjct: 228 ATAGGAEKSNVKIQSTP-VKQSGGGCC 253
>gi|1370162|emb|CAA66447.1| RAB1A [Lotus japonicus]
gi|388504068|gb|AFK40100.1| unknown [Lotus japonicus]
Length = 201
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 129/203 (63%), Gaps = 8/203 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELQGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +VV + FA E G F+E SAK +NV+Q F + +I GSK
Sbjct: 122 KSDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTGSK 181
Query: 189 GLKKNIFKQKP-PEADAAASGCC 210
+ K +P P+ S CC
Sbjct: 182 SAETVQMKGQPIPQ----KSNCC 200
>gi|324506590|gb|ADY42810.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 202
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 130/202 (64%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD+T +++F N+ W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S+R V +A + G F+E SAK+ NV+Q F + +I + + +
Sbjct: 122 KCDLTSKRAVEYNSAKEYADQLGIPFLETSAKSSTNVEQAFLTMAAEIKNRMGPVQQAGT 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G I +P + GCC
Sbjct: 182 GPSVRIGGSQPVN-EKKTGGCC 202
>gi|255634140|gb|ACU17433.1| unknown [Glycine max]
Length = 212
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D E+ R V+ + FA E G F+E SAK NV+Q F + I
Sbjct: 122 KCDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASI 169
>gi|224057960|ref|XP_002299410.1| predicted protein [Populus trichocarpa]
gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa]
gi|222846668|gb|EEE84215.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 120/168 (71%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D + +VV+ + FA E G F+E SAK +NV+Q F + I
Sbjct: 122 KSDLTANKVVSYETAKAFADEIGIPFMETSAKNAINVEQAFMAMAADI 169
>gi|195399732|ref|XP_002058473.1| GJ14443 [Drosophila virilis]
gi|194142033|gb|EDW58441.1| GJ14443 [Drosophila virilis]
Length = 205
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 137/210 (65%), Gaps = 10/210 (4%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTP 180
LLVGNK D +++VV +A + G F+E SAK+ NV+Q F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYAHQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
S + + +K I + +P E SGCC
Sbjct: 180 SSATDNASKVK--IDQGRPVE--NTKSGCC 205
>gi|168030217|ref|XP_001767620.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681149|gb|EDQ67579.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 203
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 120/168 (71%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D S++VV FA E G F+E SAK NV+Q F + +I
Sbjct: 122 KSDLASKKVVDYATAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|332031583|gb|EGI71055.1| Ras-related protein Rab-10 [Acromyrmex echinatior]
Length = 200
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 124/173 (71%), Gaps = 3/173 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
+GNK D E +RVV+ ++G ARE+G F+E SAK +N+ + F EL ILD
Sbjct: 120 LGNKSDMEEKRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILD 172
>gi|195113911|ref|XP_002001511.1| GI10837 [Drosophila mojavensis]
gi|193918105|gb|EDW16972.1| GI10837 [Drosophila mojavensis]
Length = 205
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 137/210 (65%), Gaps = 10/210 (4%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTP 180
LLVGNK D +++VV +A + G F+E SAK+ NV+Q F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYAHQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
S + + +K I + +P E SGCC
Sbjct: 180 SSATDNASKVK--IDQGRPVE--NTRSGCC 205
>gi|225454983|ref|XP_002281150.1| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
gi|297744977|emb|CBI38569.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 130/203 (64%), Gaps = 5/203 (2%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
QE+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IW
Sbjct: 3 QEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D + +VV+ + FA E G F+E SAK NV+Q F + I + +
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAADIKTRMASQPAMN 180
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
++ Q P SGCC
Sbjct: 181 NARPPSVQLQGQPVNQ--KSGCC 201
>gi|409082456|gb|EKM82814.1| hypothetical protein AGABI1DRAFT_111382 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200290|gb|EKV50214.1| hypothetical protein AGABI2DRAFT_190604 [Agaricus bisporus var.
bisporus H97]
Length = 204
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 126/202 (62%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV FA + F+E SAK NV+Q F + +I D +
Sbjct: 123 KSDLTGKKVVEYTVAKEFADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMGSATAPTG 182
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K + ++GCC
Sbjct: 183 AAKSSTVTPGQSVQSQQSNGCC 204
>gi|307213108|gb|EFN88630.1| Ras-related protein Rab-10 [Harpegnathos saltator]
Length = 200
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 124/173 (71%), Gaps = 3/173 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ + F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDEAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
+GNK D E +RVV+ ++G ARE+G F+E SAK +N+ Q F EL ILD
Sbjct: 120 LGNKSDMEDKRVVSTEKGEAIAREHGIRFMETSAKANINIDQAFSELAEAILD 172
>gi|131803|sp|P10536.1|RAB1B_RAT RecName: Full=Ras-related protein Rab-1B
gi|57006|emb|CAA32105.1| unnamed protein product [Rattus sp.]
Length = 201
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 132/202 (65%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P +A+ GCC
Sbjct: 181 GERPNLKIDSTP-VKSASGGCC 201
>gi|440911147|gb|ELR60860.1| Ras-related protein Rab-18, partial [Bos grunniens mutus]
Length = 174
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/150 (63%), Positives = 111/150 (74%), Gaps = 3/150 (2%)
Query: 34 FTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMV 92
FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQERFRTLT SYYRGAQG+I+V
Sbjct: 2 FTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILV 61
Query: 93 YDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGC 152
YDVTRRDTF L D W E++ Y T D + +LVGNK+DKE+ V + EG+ FAR++
Sbjct: 62 YDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKENHE-VDRNEGLKFARKHSM 119
Query: 153 LFIECSAKTRVNVQQCFEELVLKILDTPSL 182
LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 120 LFIEESAKTCDGVQCAFEELVEKIIQTPGL 149
>gi|326506496|dbj|BAJ86566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT D+F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDLDSFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
K D ++VV+ + FA E G F+E SAK +NV+Q F + I D
Sbjct: 122 KCDLTDKKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKD 171
>gi|322802264|gb|EFZ22660.1| hypothetical protein SINV_03565 [Solenopsis invicta]
Length = 200
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 123/173 (71%), Gaps = 3/173 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
+GNK D E RVV+ ++G ARE+G F+E SAK +N+ + F EL ILD
Sbjct: 120 LGNKSDMEERRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILD 172
>gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis]
gi|224284661|gb|ACN40063.1| unknown [Picea sitchensis]
Length = 202
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 133/202 (65%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV + FA E G F+E SAK +NV+ F + +I + + ++ +
Sbjct: 122 KNDLTAKKVVDYQTAKAFADEIGIPFLETSAKNAINVEDAFMTMAAEIKN--RMASQPAM 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ Q + SGCC
Sbjct: 180 NSTRPTTVQMKGQPVVPKSGCC 201
>gi|21313162|ref|NP_083852.1| ras-related protein Rab-1B [Mus musculus]
gi|354494718|ref|XP_003509482.1| PREDICTED: ras-related protein Rab-1B-like [Cricetulus griseus]
gi|46577116|sp|Q9D1G1.1|RAB1B_MOUSE RecName: Full=Ras-related protein Rab-1B
gi|12834379|dbj|BAB22888.1| unnamed protein product [Mus musculus]
gi|16741106|gb|AAH16408.1| RAB1B, member RAS oncogene family [Mus musculus]
gi|74140247|dbj|BAE33821.1| unnamed protein product [Mus musculus]
gi|112292937|dbj|BAF02846.1| Rab1B [Mus musculus]
gi|148701158|gb|EDL33105.1| RAB1B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|344243245|gb|EGV99348.1| Ras-related protein Rab-1B [Cricetulus griseus]
Length = 201
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 131/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A+ GCC
Sbjct: 181 GERPNLKIDSTP-VKPASGGCC 201
>gi|145484709|ref|XP_001428364.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833834|emb|CAI39372.1| rab_A10 [Paramecium tetraurelia]
gi|124395449|emb|CAK60966.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 134/210 (63%), Gaps = 10/210 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKL 64
A QQ++DYLFK+L+IG+S VGKSSLLL F+ F E PTIGVDFK++ D+ GK +K+
Sbjct: 2 AFQQDYDYLFKILLIGNSAVGKSSLLLRFSDQIFSESFLPTIGVDFKIRTFDMQGKSVKM 61
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQERF+T+T+SYY+GA GII+ YD+T + +F ++ + W E++ +++ ++ ++L
Sbjct: 62 QIWDTAGQERFKTITASYYKGAHGIILTYDITDKQSFKDIEN-WLAEVEKHAS-ENVVRL 119
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELV----LKILDTP 180
LVGNK D ES+R VT +EG A G FIE SAK NV Q F L KI +
Sbjct: 120 LVGNKADLESKRQVTYEEGKELADSLGIKFIEASAKANTNVDQAFMTLANNIKAKIGKSE 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
G K N+ P + + GCC
Sbjct: 180 DKPTPGGKTPAGNLKNTSPAKKEG---GCC 206
>gi|452819428|gb|EME26487.1| Rab family, other [Galdieria sulphuraria]
Length = 203
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 132/206 (64%), Gaps = 12/206 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYNESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ N+ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVK-TWLHEIDRYA-NESVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLA 184
K D +++VV FA G F+E SAKT NV+Q F +E+ ++ P
Sbjct: 122 KNDLTTKKVVDTATAKEFADSLGIKFLETSAKTSENVEQAFITMAQEIKERMASQPQ-TQ 180
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
+ S G+ Q+ E +S CC
Sbjct: 181 KTSSGIHVGANAQEVKE----SSSCC 202
>gi|242066528|ref|XP_002454553.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|194691170|gb|ACF79669.1| unknown [Zea mays]
gi|219887101|gb|ACL53925.1| unknown [Zea mays]
gi|241934384|gb|EES07529.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|413938047|gb|AFW72598.1| GTP-binding protein YPTM2 isoform 1 [Zea mays]
gi|413938048|gb|AFW72599.1| GTP-binding protein YPTM2 isoform 2 [Zea mays]
Length = 203
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 119/170 (70%), Gaps = 3/170 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
K D + +VV + FA E G F+E SAK NV+Q F + I D
Sbjct: 122 KSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKD 171
>gi|357631253|gb|EHJ78843.1| small GTP-binding protein Rab10 [Danaus plexippus]
Length = 206
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 127/176 (72%), Gaps = 3/176 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ ++F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF ++ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 181
+GNK D E +RVV+K+ G ARE+G F+E SAK+ N+++ F EL ILD +
Sbjct: 120 LGNKCDMEDKRVVSKERGEAIAREHGIRFMETSAKSNTNIERAFSELAEAILDKSA 175
>gi|297814341|ref|XP_002875054.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297320891|gb|EFH51313.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 127/204 (62%), Gaps = 9/204 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASDS-VNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD--TPSLLAEG 186
K D + R V + FA E G F+E SAK NV+Q F + I D A
Sbjct: 122 KCDLAANRAVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKDRMASQPAANN 181
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
++ I Q P+ + GCC
Sbjct: 182 ARPPTVQIRGQPVPQKN----GCC 201
>gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana plumbaginifolia]
Length = 203
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYASD-SVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV+ + FA E G F+E SAK NV+Q F + I + + +
Sbjct: 122 KCDLTAQKVVSTETAQAFADEIGIPFMETSAKNATNVEQAFMAMAASIKNRMASQPASNN 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ + P SGCC
Sbjct: 182 ARPPTVQIRGQPVNQ--KSGCC 201
>gi|194762816|ref|XP_001963530.1| GF20241 [Drosophila ananassae]
gi|190629189|gb|EDV44606.1| GF20241 [Drosophila ananassae]
Length = 204
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 136/205 (66%), Gaps = 4/205 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D +RVV K+ G ARE+G F+E SAK+ N+++ F EL ILD S E
Sbjct: 120 LGNKCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNTNIEEAFCELAQAILDKTS-GRE 178
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
++ ++ I ++ + + CC
Sbjct: 179 SAENQERVIIDRRNNDKAPGYNKCC 203
>gi|198469194|ref|XP_002134246.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
gi|198146758|gb|EDY72873.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 136/205 (66%), Gaps = 4/205 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D +RVV K+ G ARE+G F+E SAK+ N+++ F EL ILD S E
Sbjct: 120 LGNKCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNTNIERAFCELAEAILDKTS-GKE 178
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
++ ++ + ++ + S CC
Sbjct: 179 AAENPERVVIDRRNNDKAPGYSKCC 203
>gi|328784309|ref|XP_003250431.1| PREDICTED: hypothetical protein LOC409456 [Apis mellifera]
Length = 1867
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +KL IWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 66
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD T ++TF N+ W +EID Y+ + + KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNKLLVGN 124
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D +++VV +A + G F+E SAK +NV+Q F + +I
Sbjct: 125 KCDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEI 172
>gi|224074217|ref|XP_002304305.1| predicted protein [Populus trichocarpa]
gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa]
gi|222841737|gb|EEE79284.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 120/168 (71%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D + +VV+ + FA E G F+E SAK NV+Q F + +I
Sbjct: 122 KCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 169
>gi|402218107|gb|EJT98185.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 215
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 131/205 (63%), Gaps = 12/205 (5%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAG 71
K+L+IGDS VGKSSLLL F+ +F EE S TIGVDFKV+ ++V G K KL+IWDTAG
Sbjct: 13 LKILLIGDSSVGKSSLLLRFSDQSFLSEEESSATIGVDFKVQRIEVDGVKYKLSIWDTAG 72
Query: 72 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVD 131
QERFRT+TSSYYRGAQG+I+VYDV+ R++F +L W E++ Y K++VGNK+D
Sbjct: 73 QERFRTITSSYYRGAQGVILVYDVSSRESFDDLPR-WFTELETY-CGPSVAKVIVGNKID 130
Query: 132 KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLK 191
KE R V EG +A G LF+E SAK ++V + F+ +V KI+ TP L + G
Sbjct: 131 KEFSRRVPTAEGQAYAERMGALFLESSAKRGIHVDEVFQTIVRKIVATPELWQKNKPGTA 190
Query: 192 K-------NIFKQKPPEADAAASGC 209
+ ++P + + GC
Sbjct: 191 NVNTMPGAGVRLEQPGQVEHPGCGC 215
>gi|355714863|gb|AES05142.1| RAB1B, member RAS oncoprotein family [Mustela putorius furo]
Length = 210
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 123/175 (70%), Gaps = 3/175 (1%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKK 61
+++A E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK
Sbjct: 7 TAAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT 66
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
+KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++
Sbjct: 67 IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENV 124
Query: 122 IKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
KLLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 125 NKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 179
>gi|195448332|ref|XP_002071611.1| GK25049 [Drosophila willistoni]
gi|194167696|gb|EDW82597.1| GK25049 [Drosophila willistoni]
Length = 204
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 138/205 (67%), Gaps = 4/205 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D +RVV+K+ G ARE+G F+E SAK+ +N+++ F EL ILD S E
Sbjct: 120 LGNKCDMTDKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTS-GRE 178
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
++ ++ + ++ + + CC
Sbjct: 179 SAENPERVVIDRRNNDKAPGYNKCC 203
>gi|225718924|gb|ACO15308.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 128/202 (63%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F NL W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQ-WLQEIDRYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV +A + F+E SAK NV+Q F + +I + +
Sbjct: 122 KCDLTTKKVVDYTTAKEYADQLSMPFLEASAKNATNVEQAFMTMAAEIKN--RVGPPAPS 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + P + SGCC
Sbjct: 180 GPSGQVKIDSTPVQSKSGSGCC 201
>gi|195053856|ref|XP_001993842.1| GH18937 [Drosophila grimshawi]
gi|193895712|gb|EDV94578.1| GH18937 [Drosophila grimshawi]
Length = 205
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 138/210 (65%), Gaps = 10/210 (4%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTP 180
LLVGNK D +++VV +A + G F+E SAK+ NV+Q F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTIAAEYANQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
S + + +K I + +P E + SGCC
Sbjct: 180 SSATDNASKVK--IDQGRPVENN--RSGCC 205
>gi|146180701|ref|XP_001021320.2| Ras family protein [Tetrahymena thermophila]
gi|146144411|gb|EAS01075.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777750|dbj|BAJ21271.1| Rab-family small GTPase Rab1A [Tetrahymena thermophila]
Length = 211
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 121/170 (71%), Gaps = 3/170 (1%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAI 66
QQ++DYLFKLL+IG+S VGKSSLLL F+ + F + PTIGVDFK++ D+ GK +KL I
Sbjct: 4 QQDYDYLFKLLLIGNSAVGKSSLLLRFSDNIFNDCFLPTIGVDFKIRTFDIQGKAVKLQI 63
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERF+T+TSSYY+GA GII+VYD+T + TF ++ D W E D + N++ IKLLV
Sbjct: 64 WDTAGQERFKTITSSYYKGAHGIILVYDITDKQTFKDI-DNWLAEAD-KNANENVIKLLV 121
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
GNK D ES+R VT +EG A G FIE SA NV+ F L +I
Sbjct: 122 GNKADLESKRQVTFEEGKELADSLGIKFIETSALNSNNVETAFITLATEI 171
>gi|56753633|gb|AAW25019.1| SJCHGC09359 protein [Schistosoma japonicum]
gi|226466726|emb|CAX69498.1| Rab-protein 8 [Schistosoma japonicum]
Length = 205
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 133/196 (67%), Gaps = 15/196 (7%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYLFKLL+IGDSGVGK+S+LL F+ + F + TIG+DFK++ VD+ GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTSILLRFSDNLFNQTFISTIGIDFKIRTVDIDGKKIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERF+T+T++YYRGA GI++VYD+T + +F N+ W + ID ++ N D K+L+GNK
Sbjct: 65 AGQERFKTITTAYYRGAMGIMLVYDITNQHSFNNIK-TWMQNIDEHANN-DVEKMLLGNK 122
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK- 188
D + +R ++ ++G+ A + LF+E SAK+ +N+ + FE LA G K
Sbjct: 123 CDVDEKRQISFQQGLQLANSHNILFMETSAKSNINITEAFEA-----------LATGIKV 171
Query: 189 GLKKNIFKQKPPEADA 204
+++N+ PP D
Sbjct: 172 KMERNMDLNNPPREDT 187
>gi|402892814|ref|XP_003909603.1| PREDICTED: ras-related protein Rab-1B [Papio anubis]
Length = 264
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 67 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 126
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 127 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 184
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 185 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 243
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A GCC
Sbjct: 244 GERPNLKIDSTP-VKPAGGGCC 264
>gi|225713410|gb|ACO12551.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|225714426|gb|ACO13059.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462177|gb|ADD24136.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462929|gb|ADD24512.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290463011|gb|ADD24553.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561479|gb|ADD38140.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561689|gb|ADD38244.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F NL W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQ-WLQEIDRYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV +A + F+E SAK NV+Q F + +I + +
Sbjct: 122 KCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAEIKN--RVGPPAPS 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + P + + +GCC
Sbjct: 180 GPSGQVKIDSTPVSSKSGTGCC 201
>gi|255581964|ref|XP_002531780.1| protein with unknown function [Ricinus communis]
gi|223528573|gb|EEF30594.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 130/208 (62%), Gaps = 17/208 (8%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + +VV+ + FA E G F+E SAK NV+Q F + +I +
Sbjct: 122 KNDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI--------KNRM 173
Query: 189 GLKKNIFKQKPPEADAAA------SGCC 210
+ + +PP SGCC
Sbjct: 174 ASQPAMNNARPPTVQIRGQPVNQKSGCC 201
>gi|195454241|ref|XP_002074152.1| GK12772 [Drosophila willistoni]
gi|194170237|gb|EDW85138.1| GK12772 [Drosophila willistoni]
Length = 205
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 137/210 (65%), Gaps = 10/210 (4%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTP 180
LLVGNK D +++VV +A + G F+E SAK+ NV+Q F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
S + + +K I + +P E SGCC
Sbjct: 180 SSATDNASKVK--IDQGRPVE--NTKSGCC 205
>gi|89257579|gb|ABD65068.1| GTP-binding protein, putative [Brassica oleracea]
Length = 202
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 131/203 (64%), Gaps = 8/203 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+ YDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-LDTPSLLAEGS 187
K D S++VV+ + FA E G F+E SAK NV++ F + I S A GS
Sbjct: 122 KCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGS 181
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
K I Q + SGCC
Sbjct: 182 KPSTVQIRGQPVNQ----QSGCC 200
>gi|224063625|ref|XP_002301234.1| predicted protein [Populus trichocarpa]
gi|222842960|gb|EEE80507.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
K D + +VV+ + FA E G F+E SAK NV+Q F + I D
Sbjct: 122 KSDLTANKVVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAAAIKD 171
>gi|410045431|ref|XP_003313192.2| PREDICTED: ras-related protein Rab-1B isoform 2 [Pan troglodytes]
Length = 269
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 72 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 131
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 132 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 189
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 190 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 248
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A GCC
Sbjct: 249 GERPNLKIDSTP-VKPAGGGCC 269
>gi|49065350|emb|CAG38493.1| RAB1B [Homo sapiens]
Length = 201
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTENYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A GCC
Sbjct: 181 GERPNLKIDSTP-VKPAGGGCC 201
>gi|24648682|ref|NP_732610.1| Rab1 [Drosophila melanogaster]
gi|194899532|ref|XP_001979313.1| GG14761 [Drosophila erecta]
gi|195355524|ref|XP_002044241.1| GM15089 [Drosophila sechellia]
gi|195498456|ref|XP_002096531.1| Rab1 [Drosophila yakuba]
gi|195569217|ref|XP_002102607.1| GD19996 [Drosophila simulans]
gi|2313033|dbj|BAA21705.1| rab1 [Drosophila melanogaster]
gi|7300727|gb|AAF55873.1| Rab1 [Drosophila melanogaster]
gi|190651016|gb|EDV48271.1| GG14761 [Drosophila erecta]
gi|194129542|gb|EDW51585.1| GM15089 [Drosophila sechellia]
gi|194182632|gb|EDW96243.1| Rab1 [Drosophila yakuba]
gi|194198534|gb|EDX12110.1| GD19996 [Drosophila simulans]
gi|209417952|gb|ACI46514.1| FI01544p [Drosophila melanogaster]
Length = 205
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 137/210 (65%), Gaps = 10/210 (4%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTP 180
LLVGNK D +++VV +A + G F+E SAK+ NV+Q F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
S + + +K I + +P E SGCC
Sbjct: 180 SSATDNASKVK--IDQGRPVE--NTKSGCC 205
>gi|303748|dbj|BAA02115.1| GTP-binding protein [Pisum sativum]
gi|738939|prf||2001457G GTP-binding protein
Length = 201
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 128/202 (63%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLIIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQ-WLHEIDRYANDSVC-KLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +VV + FA E G F+E SAK +NV+Q F + +I GSK
Sbjct: 122 KCDLTENKVVQTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSGSK 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ K +P + + CC
Sbjct: 182 SAESVQMKGQPIPQN---NNCC 200
>gi|449279645|gb|EMC87180.1| Ras-related protein Rab-1A, partial [Columba livia]
Length = 197
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 128/200 (64%), Gaps = 4/200 (2%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 118
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D +++VV FA G F+E SAK NV+Q F + +I A
Sbjct: 119 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 178
Query: 191 KKNIFKQKPPEADAAASGCC 210
K N+ Q P ++ GCC
Sbjct: 179 KSNVKIQSTP-VKQSSGGCC 197
>gi|357508061|ref|XP_003624319.1| Ras-like protein [Medicago truncatula]
gi|355499334|gb|AES80537.1| Ras-like protein [Medicago truncatula]
Length = 202
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 127/202 (62%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D SER V+ FA E G F+E SAK NV+Q F + I D +A
Sbjct: 122 KCDLTSERAVSYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDR---MASQPT 178
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ Q + SGCC
Sbjct: 179 NNARPPTVQIRGQPVGQKSGCC 200
>gi|289739869|gb|ADD18682.1| Rab protein 1 [Glossina morsitans morsitans]
Length = 205
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 137/210 (65%), Gaps = 10/210 (4%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
SA E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ K +K
Sbjct: 2 SAINPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDNKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTP 180
LLVGNK D +++VV +A + G F+E SAK+ NV+Q F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYANQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
S + + +K I + +P E + SGCC
Sbjct: 180 SSATDNTSKVK--IDQGRPVE--STKSGCC 205
>gi|13569962|ref|NP_112243.1| ras-related protein Rab-1B [Homo sapiens]
gi|197100392|ref|NP_001127221.1| ras-related protein Rab-1B [Pongo abelii]
gi|388490382|ref|NP_001253093.1| ras-related protein Rab-1B [Macaca mulatta]
gi|73983002|ref|XP_852545.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Canis lupus
familiaris]
gi|194218484|ref|XP_001491236.2| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Equus
caballus]
gi|301762492|ref|XP_002916663.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Ailuropoda
melanoleuca]
gi|332250270|ref|XP_003274276.1| PREDICTED: ras-related protein Rab-1B [Nomascus leucogenys]
gi|344295844|ref|XP_003419620.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Loxodonta
africana]
gi|348565037|ref|XP_003468310.1| PREDICTED: ras-related protein Rab-1B-like [Cavia porcellus]
gi|395851731|ref|XP_003798406.1| PREDICTED: ras-related protein Rab-1B [Otolemur garnettii]
gi|397517009|ref|XP_003828712.1| PREDICTED: ras-related protein Rab-1B [Pan paniscus]
gi|403293572|ref|XP_003937787.1| PREDICTED: ras-related protein Rab-1B [Saimiri boliviensis
boliviensis]
gi|410974562|ref|XP_003993713.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Felis catus]
gi|23396834|sp|Q9H0U4.1|RAB1B_HUMAN RecName: Full=Ras-related protein Rab-1B
gi|75070920|sp|Q5RE13.1|RAB1B_PONAB RecName: Full=Ras-related protein Rab-1B
gi|33150668|gb|AAP97212.1|AF092437_1 rab1B [Homo sapiens]
gi|12052796|emb|CAB66570.1| hypothetical protein [Homo sapiens]
gi|49522855|gb|AAH71169.1| RAB1B, member RAS oncogene family [Homo sapiens]
gi|55726450|emb|CAH89994.1| hypothetical protein [Pongo abelii]
gi|117645214|emb|CAL38073.1| hypothetical protein [synthetic construct]
gi|158257604|dbj|BAF84775.1| unnamed protein product [Homo sapiens]
gi|189067518|dbj|BAG37733.1| unnamed protein product [Homo sapiens]
gi|208967236|dbj|BAG73632.1| RAB1B, member RAS oncogene family [synthetic construct]
gi|351710863|gb|EHB13782.1| Ras-related protein Rab-1B [Heterocephalus glaber]
gi|380785433|gb|AFE64592.1| ras-related protein Rab-1B [Macaca mulatta]
gi|384949652|gb|AFI38431.1| ras-related protein Rab-1B [Macaca mulatta]
gi|410214286|gb|JAA04362.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410266454|gb|JAA21193.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410305364|gb|JAA31282.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410336325|gb|JAA37109.1| RAB1B, member RAS oncogene family [Pan troglodytes]
Length = 201
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A GCC
Sbjct: 181 GERPNLKIDSTP-VKPAGGGCC 201
>gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [Cicer arietinum]
Length = 202
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 132/203 (65%), Gaps = 8/203 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPSLLAEGS 187
K D + +VV+ + FA E G F+E SAK NV+Q F + +I + S A +
Sbjct: 122 KCDLAANKVVSSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPANNA 181
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
+ I Q + SGCC
Sbjct: 182 RPPTVQIRGQPMNQ----KSGCC 200
>gi|334312769|ref|XP_001374724.2| PREDICTED: ras-related protein Rab-1A-like [Monodelphis domestica]
Length = 257
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 128/201 (63%), Gaps = 4/201 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDT
Sbjct: 60 HDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 119
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGNK
Sbjct: 120 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 177
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
D +++VV FA G F+E SAK NV+Q F + +I A
Sbjct: 178 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 237
Query: 190 LKKNIFKQKPPEADAAASGCC 210
K N+ Q P ++ GCC
Sbjct: 238 EKSNVKIQSTP-VKQSSGGCC 257
>gi|255637404|gb|ACU19030.1| unknown [Glycine max]
Length = 202
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 128/203 (63%), Gaps = 8/203 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKL +IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLFLIGDSGVGKSCLLLRFADDSYIESYINTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPSLLAEGS 187
K D E+ R V+ + FA E G F+E SAK NV+Q F + I D S A +
Sbjct: 122 KCDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKDRMASQPANNA 181
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
+ I Q A GCC
Sbjct: 182 RPPTVQIRGQPV----AQKGGCC 200
>gi|388500972|gb|AFK38552.1| unknown [Medicago truncatula]
Length = 202
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 127/202 (62%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D SER V+ FA E G F+E SAK NV+Q F + I D +A
Sbjct: 122 KCDLTSERAVSYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDR---MASQPT 178
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ Q + SGCC
Sbjct: 179 NNARPPTVQIRGQPVGQKSGCC 200
>gi|402591657|gb|EJW85586.1| member Ras oncogene family RAB1A [Wuchereria bancrofti]
Length = 205
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 129/202 (63%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +KL IWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQIWD 66
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD+T +++F N+ W +EID Y+ ++ KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGN 124
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D R V +A + G F+E SAK+ NV+Q F + +I + + +
Sbjct: 125 KCDLIIRRAVEHSAAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRMGPIQQVGT 184
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G I +P + + GCC
Sbjct: 185 GPSVRIGGSQPVN-EKKSGGCC 205
>gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis]
gi|116784933|gb|ABK23527.1| unknown [Picea sitchensis]
gi|224284724|gb|ACN40093.1| unknown [Picea sitchensis]
Length = 202
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + R V FA E G F+E SAK NV+Q F + +I + + ++ +
Sbjct: 122 KCDLTANRAVDYDTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKN--RMASQPAM 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ Q + SGCC
Sbjct: 180 NSSRPATVQMKGQPVVQKSGCC 201
>gi|357445237|ref|XP_003592896.1| Ras-like protein [Medicago truncatula]
gi|92893897|gb|ABE91947.1| Ras small GTPase, Rab type [Medicago truncatula]
gi|355481944|gb|AES63147.1| Ras-like protein [Medicago truncatula]
Length = 203
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 131/206 (63%), Gaps = 7/206 (3%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLA 65
S E+DYLFKLL+IGDS VGKS LLL F D++++ TIGVDFK++ V++ GK KL
Sbjct: 2 SSNEYDYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTAKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ N KLL
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDIESFNNVKQ-WLHEIDRYA-NHSVSKLL 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
VGNK D ++V FA E G F+E SAK +NV+Q F + +I +
Sbjct: 120 VGNKCDLTDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPT 179
Query: 186 GSKGLKKNI-FKQKPPEADAAASGCC 210
GSK +++ K +P + + + CC
Sbjct: 180 GSKSAAESVQMKGQPIQQN---TNCC 202
>gi|125773595|ref|XP_001358056.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|195166166|ref|XP_002023906.1| GL27164 [Drosophila persimilis]
gi|54637791|gb|EAL27193.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|194106066|gb|EDW28109.1| GL27164 [Drosophila persimilis]
Length = 205
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 137/210 (65%), Gaps = 10/210 (4%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTP 180
LLVGNK D +++VV +A + G F+E SAK+ NV+Q F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
S + + +K I + +P E SGCC
Sbjct: 180 SSATDNASKVK--IDQGRPVE--KPNSGCC 205
>gi|299753665|ref|XP_001833414.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
gi|298410405|gb|EAU88348.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
Length = 204
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 124/202 (61%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT DTF+N+ W EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQ-WLSEIDRYAS-EGVNKLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV FA + F+E SAK NV+Q F + +I D + S
Sbjct: 123 KSDLTGKKVVEYSVAKEFADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPSG 182
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K + GCC
Sbjct: 183 AAKSSTVTPGQTVQSQTGGGCC 204
>gi|297842904|ref|XP_002889333.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297335175|gb|EFH65592.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F+ D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D R V + FA E G F+E SAK NV+Q F + I + + G+
Sbjct: 122 KSDLTENRDVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNN 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ + P A +GCC
Sbjct: 182 ARPPTVQIRGQPMAQ--KNGCC 201
>gi|15217622|ref|NP_171715.1| Ras-related protein RABD2A [Arabidopsis thaliana]
gi|205371858|sp|P28188.3|RAD2A_ARATH RecName: Full=Ras-related protein RABD2a; Short=AtRABD2a; AltName:
Full=Ras-related protein Ara-5; AltName:
Full=Ras-related protein Rab1B; Short=AtRab1B
gi|15450465|gb|AAK96526.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|16974457|gb|AAL31232.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|332189266|gb|AEE27387.1| Ras-related protein RABD2A [Arabidopsis thaliana]
Length = 203
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 128/202 (63%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F+ D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D R + + FA E G F+E SAK NV+Q F + I + + G+
Sbjct: 122 KSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNN 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ + P A +GCC
Sbjct: 182 ARPPTVQIRGQPVAQ--KNGCC 201
>gi|115495993|ref|NP_001069701.1| ras-related protein Rab-1B [Bos taurus]
gi|110832072|sp|Q2HJH2.1|RAB1B_BOVIN RecName: Full=Ras-related protein Rab-1B
gi|88682888|gb|AAI05394.1| RAB1B, member RAS oncogene family [Bos taurus]
gi|440907365|gb|ELR57519.1| Ras-related protein Rab-1B [Bos grunniens mutus]
Length = 201
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A GCC
Sbjct: 181 GERPNLKIDSTP-VKQAGGGCC 201
>gi|426216683|ref|XP_004002587.1| PREDICTED: ras-related protein Rab-13 [Ovis aries]
gi|81674373|gb|AAI09841.1| RAB13, member RAS oncogene family [Bos taurus]
gi|296489679|tpg|DAA31792.1| TPA: ras-related protein Rab-13 [Bos taurus]
Length = 203
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 129/196 (65%), Gaps = 11/196 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D E++R V K++ ARE+G F E SAK+ +NV + F L I LL G
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI-----LLKSGG 175
Query: 188 KGLKKNIFKQKPPEAD 203
+ LK N KPP D
Sbjct: 176 RRLKNN---NKPPSTD 188
>gi|126697336|gb|ABO26625.1| Ras-related protein Rab-1A [Haliotis discus discus]
Length = 205
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 131/207 (63%), Gaps = 4/207 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV +A + G F+E SAK NV+Q F + +I + +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPV 179
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
S+ K ++ GCC
Sbjct: 180 TAASEN-KPSVKINSSTPVKQGGGGCC 205
>gi|402218390|gb|EJT98467.1| GTP-binding protein ypt1 [Dacryopinax sp. DJM-731 SS1]
Length = 206
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 130/204 (63%), Gaps = 5/204 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T+SYYRGA GII+VYDVT DTFTN+ W +EID +++ + KLLVGN
Sbjct: 65 TAGQERFRTITASYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRFAS-EGVNKLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA + G F+E SAK NV+Q F + +I D + +
Sbjct: 123 KSDLTNKKVVEYTVAKEFADQLGIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPAG 182
Query: 189 GLKKNIFK--QKPPEADAAASGCC 210
G K K Q ++ CC
Sbjct: 183 GASKGGVKVGQGQAVGQQTSNSCC 206
>gi|329185063|ref|NP_001002129.2| ras-related protein-like [Danio rerio]
gi|66911050|gb|AAH97013.1| Zgc:86773 protein [Danio rerio]
Length = 201
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS +LL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W KEID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQ-WLKEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I + S
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAEEI--KKRMRPGASG 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G +K K + + GCC
Sbjct: 180 GSEKPDLKIESTPVQQSGGGCC 201
>gi|194741692|ref|XP_001953321.1| GF17263 [Drosophila ananassae]
gi|190626380|gb|EDV41904.1| GF17263 [Drosophila ananassae]
Length = 205
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 137/210 (65%), Gaps = 10/210 (4%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTP 180
LLVGNK D +++VV +A + G F+E SAK+ NV+Q F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
S + + +K I + +P E SGCC
Sbjct: 180 SSATDNASKVK--IDQGRPVE--NTRSGCC 205
>gi|2317906|gb|AAC24370.1| ARA-5 [Arabidopsis thaliana]
Length = 258
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 129/208 (62%), Gaps = 5/208 (2%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKL 62
S E+DYLFKLL+IGDSGVGKS LLL F+ D++ E TIGVDFK++ V+ GK +
Sbjct: 53 SKTMNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTI 112
Query: 63 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCI 122
KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ +
Sbjct: 113 KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVN 170
Query: 123 KLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
KLLVGNK D R + + FA E G F+E SAK NV+Q F + I + +
Sbjct: 171 KLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMAS 230
Query: 183 LAEGSKGLKKNIFKQKPPEADAAASGCC 210
G+ + + P A +GCC
Sbjct: 231 QPAGNNARPPTVQIRGQPVAQ--KNGCC 256
>gi|158291520|ref|XP_313029.4| AGAP004146-PA [Anopheles gambiae str. PEST]
gi|157017587|gb|EAA08609.4| AGAP004146-PA [Anopheles gambiae str. PEST]
Length = 201
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 133/205 (64%), Gaps = 11/205 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD T D+F N+ W +EI+ Y+ + + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDCTDHDSFENVKQ-WLEEIERYACD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTPSLLAE 185
K D ++++ V + A + G F+E SAK NV+Q F + +I + PS A+
Sbjct: 122 KCDLQTKKRVDTTTAMELANQLGIPFLETSAKNATNVEQAFMTMAAEIKNRVGPPSSAAD 181
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
+K I K + E A SGCC
Sbjct: 182 PPSAVK--IDKGRNVE---AKSGCC 201
>gi|431912641|gb|ELK14659.1| Ras-related protein Rab-1A, partial [Pteropus alecto]
Length = 197
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 127/200 (63%), Gaps = 4/200 (2%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 118
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D +++VV FA G F+E SAK NV+Q F + +I A
Sbjct: 119 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 178
Query: 191 KKNIFKQKPPEADAAASGCC 210
K N+ Q P + GCC
Sbjct: 179 KSNVKIQSTP-VKQSGGGCC 197
>gi|351714035|gb|EHB16954.1| Ras-related protein Rab-1A, partial [Heterocephalus glaber]
Length = 198
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 127/200 (63%), Gaps = 4/200 (2%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTA
Sbjct: 2 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 61
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGNK
Sbjct: 62 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 119
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D +++VV FA G F+E SAK NV+Q F + +I A
Sbjct: 120 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 179
Query: 191 KKNIFKQKPPEADAAASGCC 210
K N+ Q P + GCC
Sbjct: 180 KSNVKIQSTP-VKQSGGGCC 198
>gi|393231749|gb|EJD39338.1| GTP-binding protein ypt1 [Auricularia delicata TFB-10046 SS5]
Length = 204
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 129/203 (63%), Gaps = 5/203 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDMDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA + F+E SAK NV+Q F + +I D + S+
Sbjct: 123 KSDLTAKKVVEYGAAKEFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGATST-SQ 181
Query: 189 GLKKNI-FKQKPPEADAAASGCC 210
G K + + GCC
Sbjct: 182 GTGKGVTVTAGQSVQQQSGGGCC 204
>gi|388506692|gb|AFK41412.1| unknown [Medicago truncatula]
Length = 202
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 130/202 (64%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV+ + FA E G F+E SAK NV+Q F + +I + + S
Sbjct: 122 KSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPANSA 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ +P A GCC
Sbjct: 182 RPATVQIRGQPVNQKA---GCC 200
>gi|147788167|emb|CAN64836.1| hypothetical protein VITISV_030374 [Vitis vinifera]
Length = 240
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 129/200 (64%), Gaps = 13/200 (6%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
+D FK+L+IGDS VGKSSLL+SF S + E+L+PTIGVDFK+K + VGGK+LKL IWDT
Sbjct: 53 YDLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTG 112
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
+ T S ++ + V+ T + LS W + DL + V K+
Sbjct: 113 AK---LTHLSKFFIFDGAMRFVH--TSGNFVPRLSIHW--KFDLEEGGE------VFYKL 159
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D ESERVV+++EGI A+E+GCLF ECSAKTR NV++CFEEL LKI++ PSLL EGS
Sbjct: 160 DLESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVPSLLEEGSTVG 219
Query: 191 KKNIFKQKPPEADAAASGCC 210
K+NI K KP GCC
Sbjct: 220 KRNILKPKPENQPPPTGGCC 239
>gi|195998505|ref|XP_002109121.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
gi|190589897|gb|EDV29919.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
Length = 202
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 130/204 (63%), Gaps = 8/204 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+D+LFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT + +F N+ W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQVSFNNVKQ-WLQEIDRYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLLAEG 186
K D S++V+ +A F+E SAK NV+Q F + +I PS A
Sbjct: 122 KCDLTSKKVIDYVTAKEYADALDIPFLETSAKNATNVEQAFLTMAAEIKKRMGPSSAASA 181
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
G N+ Q P AD + GCC
Sbjct: 182 PTG---NVKIQSKPVADNKSGGCC 202
>gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|109940139|sp|P40392.2|RIC1_ORYSJ RecName: Full=Ras-related protein RIC1
gi|57899331|dbj|BAD87942.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|57900421|dbj|BAD87657.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|113532867|dbj|BAF05250.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|125526416|gb|EAY74530.1| hypothetical protein OsI_02420 [Oryza sativa Indica Group]
gi|125570818|gb|EAZ12333.1| hypothetical protein OsJ_02222 [Oryza sativa Japonica Group]
gi|215769435|dbj|BAH01664.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 202
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 131/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D RVV+ + G A E G F+E SAK NV++ F + +I + + ++ +
Sbjct: 122 KCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKN--RMASQPAT 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K Q + A S CC
Sbjct: 180 NASKPATVQMRGQPVAQQSSCC 201
>gi|170594385|ref|XP_001901944.1| Ras-related protein Rab-1A [Brugia malayi]
gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative [Brugia malayi]
Length = 205
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 129/202 (63%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +KL IWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQIWD 66
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD+T +++F N+ W +EID Y+ ++ KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGN 124
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D R V +A + G F+E SAK+ NV+Q F + +I + + +
Sbjct: 125 KCDLIIRRAVEHSAAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRMGPIQQVGT 184
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G I +P + + GCC
Sbjct: 185 GPSVRIGGSQPVN-EKKSGGCC 205
>gi|392935497|pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In Complex With
The Coiled- Coil Domain Of Lida From Legionella
Pneumophila
Length = 196
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 123/177 (69%), Gaps = 3/177 (1%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGG 59
+ S S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ G
Sbjct: 3 LGSMSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG 62
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
K +KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ +
Sbjct: 63 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-E 120
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
+ KLLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 121 NVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 177
>gi|281203215|gb|EFA77416.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 203
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 124/181 (68%), Gaps = 3/181 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWD 68
E D+ FK+L+IGDSGVGKS LLL F D++ + TIGVDFK+K +++ GK +KL IWD
Sbjct: 4 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGAQGII+VYD T +D+F N+ W EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQ-WMGEIDRYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +E+VV + +FA G FIE SAK NV++CF + I + + + E K
Sbjct: 122 KTDLVNEKVVDTNQAKSFAESMGIPFIETSAKNATNVEECFCSMARDIKNRLADIQEAPK 181
Query: 189 G 189
G
Sbjct: 182 G 182
>gi|388520849|gb|AFK48486.1| unknown [Lotus japonicus]
Length = 202
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 131/208 (62%), Gaps = 18/208 (8%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + +VV+ + FA E G F+E SAK NV+Q F + +I ++
Sbjct: 122 KCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI---------KNR 172
Query: 189 GLKKNIFKQKPPEADAAA------SGCC 210
+ + +PP SGCC
Sbjct: 173 MASQPVNNARPPTVQIRGQPVNQKSGCC 200
>gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max]
Length = 202
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 129/203 (63%), Gaps = 8/203 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F+ D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPSLLAEGS 187
K D E+ R V+ + FA G F+E SAK NV+Q F + I D S A +
Sbjct: 122 KCDLEANRAVSYETAKAFADGIGIPFMETSAKDATNVEQAFMAMTASIKDRMASQPANNA 181
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
+ I Q A GCC
Sbjct: 182 RPPTVQIRGQPV----AQKGGCC 200
>gi|409046045|gb|EKM55525.1| hypothetical protein PHACADRAFT_256210 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 127/202 (62%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S++VV FA + F+E SAK NV+Q F + +I D + S
Sbjct: 123 KSDLTSKKVVEYGVAKEFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTTSG 182
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K +SGCC
Sbjct: 183 TGKSTTITPGQTVQQNQSSGCC 204
>gi|332373844|gb|AEE62063.1| unknown [Dendroctonus ponderosae]
Length = 202
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 133/203 (65%), Gaps = 6/203 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD T +D+F N+ W +EI+ Y+ + + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDCTDQDSFNNVKQ-WLEEIERYACD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-LDTPSLLAEGS 187
K D +++VV + +A + F+E SAK+ NV+Q F + I L + G
Sbjct: 122 KSDLTTKKVVDYQTAKEYASQLHIPFLETSAKSATNVEQAFMTMAAHIKLRVGPQTSMGD 181
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
+G K + +P E + SGCC
Sbjct: 182 QGGKVKFDQSRPVE--STKSGCC 202
>gi|302692268|ref|XP_003035813.1| small GTP-binding protein [Schizophyllum commune H4-8]
gi|300109509|gb|EFJ00911.1| small GTP-binding protein [Schizophyllum commune H4-8]
Length = 203
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 124/204 (60%), Gaps = 3/204 (1%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAI 66
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL I
Sbjct: 2 HTEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLV 119
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG 186
GNK D ++VV FA + F+E SAK NV+Q F + +I D +
Sbjct: 120 GNKSDLTGKKVVEYTVAKEFADQLAIPFLETSAKNATNVEQAFLTMAKQIKDRMGSSSAA 179
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
K + GCC
Sbjct: 180 PGAGKSSTITPGQSVNQQQGGGCC 203
>gi|432901784|ref|XP_004076945.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 131/204 (64%), Gaps = 8/204 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I + G+
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAT 178
Query: 189 --GLKKNIFKQKPPEADAAASGCC 210
G K N+ ++ GCC
Sbjct: 179 VGGEKPNVKLTPGTSVKPSSGGCC 202
>gi|356563370|ref|XP_003549937.1| PREDICTED: GTP-binding protein YPTM2-like isoform 1 [Glycine max]
Length = 202
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 120/168 (71%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D + +VV+ + FA E G F+E SAK NV+Q F + +I
Sbjct: 122 KCDLTANKVVSSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 169
>gi|221116035|ref|XP_002155975.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 202
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 130/205 (63%), Gaps = 10/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++TF N+ W +EID Y+ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQETFNNVKQ-WLQEIDRYAC-ESVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTPSLLAE 185
K D +++VV FA G F+E SAK NV+Q F + +I + P A+
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPPQTTAD 181
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
S +K K P + GCC
Sbjct: 182 RS---EKVPLKSGSP-VKPSGGGCC 202
>gi|388511969|gb|AFK44046.1| unknown [Lotus japonicus]
Length = 202
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 130/203 (64%), Gaps = 8/203 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPSLLAEGS 187
K D + R V+ + FA E G F+E SAK NV+Q F + I + S A +
Sbjct: 122 KSDLTANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKNRMASQPANNA 181
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
+ NI KP +SGCC
Sbjct: 182 RPPTVNI-SGKPV---GQSSGCC 200
>gi|444515602|gb|ELV10933.1| Ras-related protein Rab-1A [Tupaia chinensis]
Length = 205
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 127/200 (63%), Gaps = 4/200 (2%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGNK
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 126
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D +++VV FA G F+E SAK NV+Q F + +I A
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 186
Query: 191 KKNIFKQKPPEADAAASGCC 210
K N+ Q P + GCC
Sbjct: 187 KSNVKIQSTP-VKQSGGGCC 205
>gi|217071342|gb|ACJ84031.1| unknown [Medicago truncatula]
Length = 202
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 130/202 (64%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV+ + FA E G F+E SAK NV+Q F + +I + + S
Sbjct: 122 KSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPANSA 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ +P A GCC
Sbjct: 182 RPATVQIRGQPVNQKA---GCC 200
>gi|47211161|emb|CAF92536.1| unnamed protein product [Tetraodon nigroviridis]
Length = 247
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 131/194 (67%), Gaps = 5/194 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV +FA G F+E SAK+ NV+Q F + +I + +
Sbjct: 122 KCDLTTKKVVDYTTAKSFADNLGIPFLETSAKSSTNVEQAFMTMAAEI--KKRMGPGATA 179
Query: 189 GLKKNIFKQKPPEA 202
G + + +Q P +A
Sbjct: 180 GGLREVQRQNPEQA 193
>gi|405969917|gb|EKC34860.1| Ras-related protein Rab-1A [Crassostrea gigas]
Length = 205
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 131/200 (65%), Gaps = 4/200 (2%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +++F+N+ W +EID Y++ ++ KLLVGNK
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFSNVKQ-WLQEIDRYAS-ENVNKLLVGNKS 126
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D E+++VV +A + G F+E SAK NV+Q F + +I + + S
Sbjct: 127 DMETKKVVDYTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPVISASPDN 186
Query: 191 KKNIFKQKPPEADAAASGCC 210
K ++ K + GCC
Sbjct: 187 KPSV-KINASNPVKQSGGCC 205
>gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum annuum]
Length = 203
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 128/208 (61%), Gaps = 17/208 (8%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD+T +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQ-WLSEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D R V+ FA E G F+E SAK+ NV+Q F + +I + + +
Sbjct: 122 KSDLNDNRAVSYDTAKAFADEIGIPFMEASAKSATNVEQAFMAMAAEIKNRMATQPASNN 181
Query: 189 GLKKNIFKQKPPEADAAA------SGCC 210
KPP SGCC
Sbjct: 182 A--------KPPTVQIRGQPVNQKSGCC 201
>gi|217073632|gb|ACJ85176.1| unknown [Medicago truncatula]
Length = 207
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
K D SER + FA E G F+E SAK NV+Q F + I D
Sbjct: 122 KCDLTSERAASYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKD 171
>gi|428184966|gb|EKX53820.1| hypothetical protein GUITHDRAFT_150303 [Guillardia theta CCMP2712]
Length = 200
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 128/202 (63%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ N K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WMNEIDRYA-NDKVNKMLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S+R V +A G F+E SAK NV+Q F + +I + +A+
Sbjct: 122 KSDLASKRAVDTSVAKEYADSLGIPFLETSAKDSTNVEQAFITMAAEI---KARMAQAPA 178
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + + Q ++ GCC
Sbjct: 179 GKEGSASIQVGKGSEVTKKGCC 200
>gi|464524|sp|Q05974.1|RAB1A_LYMST RecName: Full=Ras-related protein Rab-1A
gi|288934|emb|CAA51233.1| RAB1 [Lymnaea stagnalis]
Length = 205
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 134/209 (64%), Gaps = 8/209 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S ++DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 STMNPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PS 181
LLVGNK D +++VV +A + G F+E SAK NV+Q F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPI 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
A SK K I P A+ GCC
Sbjct: 180 TAASDSKPSVK-INSSTPVSANKG--GCC 205
>gi|351723507|ref|NP_001238305.1| uncharacterized protein LOC100306147 [Glycine max]
gi|255627683|gb|ACU14186.1| unknown [Glycine max]
Length = 203
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 128/202 (63%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT D+F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEDSFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + RVV+ FA + G F+E SAK NV+ F + I + + ++ S
Sbjct: 122 KSDLTANRVVSYDTAKEFADQIGIPFMETSAKDATNVEDAFMAMSAAIKN--RMASQPSA 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K Q + SGCC
Sbjct: 180 NNAKPPTVQIRGQPVGQKSGCC 201
>gi|29841055|gb|AAP06068.1| similar to GenBank Accession Number S38340 membrane associated GTP
binding protein RAB18 in Caenorhabditis briggsae
[Schistosoma japonicum]
Length = 189
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 124/177 (70%), Gaps = 4/177 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVG-GKKLKLAIWDTAGQ 72
FKLL+IGDSGVGKSSLL+ +T+D FE +LS TIGVDFKVK V V G K+KL+IWDTAGQ
Sbjct: 12 FKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKLVTVPDGTKIKLSIWDTAGQ 71
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRTLT + YRG+ + VYDV R++F NL + +E+ YS N + IKLLVGNK+D
Sbjct: 72 ERFRTLTPNVYRGSHAAVFVYDVANRESFDNLK-IRMEELKTYSDNPNMIKLLVGNKID- 129
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
R+++++EG+ FAR Y + E SAKT V Q F ++V KI + L +G K
Sbjct: 130 SVPRLISREEGLRFARLYNMPYAETSAKTSEGVNQLFSDIVTKIFNHSELWNQGQKA 186
>gi|388502282|gb|AFK39207.1| unknown [Lotus japonicus]
Length = 209
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 120/168 (71%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D + +VV+ + FA E G F+E SAK NV+Q F + +I
Sbjct: 122 KCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 169
>gi|225712954|gb|ACO12323.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGD+GVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDTGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F NL W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQ-WLQEIDRYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV +A + F+E SAK NV+Q F + +I + +
Sbjct: 122 KCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAEIKN--RVGPPAPS 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + P + + +GCC
Sbjct: 180 GPSGQVKIDSTPVSSKSGTGCC 201
>gi|255539911|ref|XP_002511020.1| protein with unknown function [Ricinus communis]
gi|223550135|gb|EEF51622.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + +VV+ + FA E G F+E SAK NV+Q F + I + + +
Sbjct: 122 KSDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAADIKNRMASQPAANN 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ + P SGCC
Sbjct: 182 ARPPTVQIRGQPVNQ--KSGCC 201
>gi|403358406|gb|EJY78849.1| RAS small GTpases RIC1/ypt1, putative [Oxytricha trifallax]
Length = 208
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 133/207 (64%), Gaps = 8/207 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFK+L+IG+SGVGKSSLLL F D F + PTIGVDFK++ ++V GK +KL IWD
Sbjct: 4 EYDYLFKVLLIGNSGVGKSSLLLRFADDVFTDNFMPTIGVDFKIRTIEVDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERF+T+TSSYY+GA GII+ YD+T R++F+ + + W E++ ++++ + ++LVGN
Sbjct: 64 TAGQERFKTITSSYYKGAHGIIVTYDITDRESFSAIEN-WMNEVEKHASD-NISRILVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-----LDTPSLL 183
K D E R V+ EG A Y F+E SAK NV++ F + +I + P
Sbjct: 122 KSDMEDARQVSTDEGKELAEHYNVRFLETSAKDCKNVEEAFTMMTREIKSRVAITQPKKA 181
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
E ++ + N + + + GCC
Sbjct: 182 TEQTQAQRINKNQHQTKKIQEKKGGCC 208
>gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella vectensis]
gi|156219283|gb|EDO40167.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 131/209 (62%), Gaps = 8/209 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PS 181
LLVGNK D +++VV +A G F+E SAK NV+Q F + +I + PS
Sbjct: 120 LLVGNKCDLTTKKVVDFTTAKEYAESLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPS 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
+G+ G I P GCC
Sbjct: 180 PAPQGA-GSNVKINSSTP--VKQGGGGCC 205
>gi|392579393|gb|EIW72520.1| hypothetical protein TREMEDRAFT_26769 [Tremella mesenterica DSM
1558]
Length = 187
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 119/168 (70%), Gaps = 5/168 (2%)
Query: 16 KLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
K+L++G+S VGKSSLLL FT D+F E+ TIGVDFKV ++V KK KLAIWDTAGQ
Sbjct: 16 KILLVGNSSVGKSSLLLRFTEDDFLADEDTIATIGVDFKVTRLEVDEKKYKLAIWDTAGQ 75
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ERFRTLT+SYYRGAQG+++VYD+T R TF L W +E+D Y + +KL++GNK DK
Sbjct: 76 ERFRTLTASYYRGAQGVVLVYDMTSRKTFDELLR-WDRELDTYCGDS-IVKLILGNKADK 133
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
R VT +EG FA G LF+ECSAKT +++ F ELV K+ P
Sbjct: 134 SLARQVTTEEGKAFAESLGALFMECSAKTNEGIEEAFRELVRKVSGIP 181
>gi|242089159|ref|XP_002440412.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
gi|241945697|gb|EES18842.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
Length = 205
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/165 (57%), Positives = 117/165 (70%), Gaps = 3/165 (1%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
AS E+DYLFKLL+IGDS VGKS LLL F D+F + TIGVDFK++ VD+ GK +KL
Sbjct: 2 ASGIEYDYLFKLLLIGDSSVGKSCLLLRFADDSFVDTYISTIGVDFKIRTVDLDGKTVKL 61
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ C KL
Sbjct: 62 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQ-WLSEIDRYASDNVC-KL 119
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
LVGNK D +VV ++ FA G FIE SAK +NV++ F
Sbjct: 120 LVGNKCDLVDSKVVETEKAKAFADSLGIPFIETSAKESINVEEAF 164
>gi|195134256|ref|XP_002011553.1| GI11034 [Drosophila mojavensis]
gi|193906676|gb|EDW05543.1| GI11034 [Drosophila mojavensis]
Length = 204
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 137/205 (66%), Gaps = 4/205 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D +RVV+K+ G ARE+ F+E SAK+ +N+++ F EL ILD S E
Sbjct: 120 LGNKCDMSDKRVVSKERGEAIAREHSIRFMETSAKSNINIERAFCELAEAILDKTS-GRE 178
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
++ ++ + + + + S CC
Sbjct: 179 SAENPERVVIDRGNSDKATSYSKCC 203
>gi|405976260|gb|EKC40773.1| Ras-related protein Rab-10 [Crassostrea gigas]
Length = 212
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 128/177 (72%), Gaps = 4/177 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ LL F+ D F TIG+DFK+K V++GGKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVELGGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+S W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNPKTFENISK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPS 181
+GNK D E++R V+K G A+E+ F+E SAK +NV++ F +L IL+ +PS
Sbjct: 120 LGNKCDMENKRQVSKDRGEAIAKEHEIPFLETSAKANINVEKAFMDLAQAILNKSPS 176
>gi|383859431|ref|XP_003705198.1| PREDICTED: uncharacterized protein LOC100882595 [Megachile
rotundata]
Length = 1878
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +KL IWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 66
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD T ++TF N+ W +EID Y+ + + KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNKLLVGN 124
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++VV +A + G F+E SAK +NV+Q F + +I
Sbjct: 125 KCDLHIKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEI 172
>gi|66792866|ref|NP_001019711.1| ras-related protein Rab-13 [Bos taurus]
gi|75069879|sp|Q58DS5.1|RAB13_BOVIN RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|61553216|gb|AAX46369.1| RAB13, member RAS oncogene family [Bos taurus]
Length = 203
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 129/196 (65%), Gaps = 11/196 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DF+++ VD+ GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D E++R V K++ ARE+G F E SAK+ +NV + F L I LL G
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI-----LLKSGG 175
Query: 188 KGLKKNIFKQKPPEAD 203
+ LK N KPP D
Sbjct: 176 RRLKNN---NKPPSTD 188
>gi|390346094|ref|XP_003726477.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Strongylocentrotus
purpuratus]
Length = 206
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 132/209 (63%), Gaps = 8/209 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PS 181
LLVGNK D +++VV +A + F+E SAK NV+Q F + +I + P
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAEIKNRMGPG 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
+ GS K N + SGCC
Sbjct: 180 SVPSGSSHDKIN---PSTTPVKPSGSGCC 205
>gi|403177656|ref|XP_003336121.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172961|gb|EFP91702.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 240
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 134/210 (63%), Gaps = 18/210 (8%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ GK +KL IWD
Sbjct: 40 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKLQIWD 99
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +DTFTN+ W EID Y+ + KLLVGN
Sbjct: 100 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFTNVKQ-WLHEIDRYAC-EGVNKLLVGN 157
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD--------TP 180
K D ++VV +FA + F+E SAK+ NV+Q F + +I D T
Sbjct: 158 KSDLTQKKVVEYTVAKDFADQLTIPFLETSAKSATNVEQAFLTMAKQIKDRTGSTTVNTG 217
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
S A G +N+ +Q+ +SGCC
Sbjct: 218 SNKATLKVGAGQNVQQQQ-------SSGCC 240
>gi|195398659|ref|XP_002057938.1| GJ15815 [Drosophila virilis]
gi|194150362|gb|EDW66046.1| GJ15815 [Drosophila virilis]
Length = 204
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 126/176 (71%), Gaps = 3/176 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 181
+GNK D +RVV+K+ G ARE+G F+E SAK+ +N+++ F EL ILD S
Sbjct: 120 LGNKCDMGDKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTS 175
>gi|66518279|ref|XP_393723.2| PREDICTED: ras-related protein Rab-10 isoform 2 [Apis mellifera]
gi|380028841|ref|XP_003698094.1| PREDICTED: ras-related protein Rab-10-like [Apis florea]
Length = 200
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 123/173 (71%), Gaps = 3/173 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
+GNK D E +RVV+ + G ARE+G F+E SAK +N+ + F EL IL+
Sbjct: 120 LGNKSDMEDKRVVSTERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILE 172
>gi|260804583|ref|XP_002597167.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
gi|229282430|gb|EEN53179.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
Length = 204
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 133/209 (63%), Gaps = 9/209 (4%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PS 181
LLVGNK D +++VV FA + F+E SAK NV+Q F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDYTTAKEFADQLHIPFLETSAKNATNVEQAFMTMAAEIKNRMGPG 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
+ + K+N+ Q P + GCC
Sbjct: 180 AVTNET---KQNVKIQSTP-VKQSGGGCC 204
>gi|343424907|emb|CBQ68445.1| probable GTP-binding protein ypt1 [Sporisorium reilianum SRZ2]
Length = 208
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 66
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y+ + KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAC-EGVNKLLVGN 124
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA + F+E SAK+ NV+Q F + +I D ++
Sbjct: 125 KSDLTNKKVVEYATAKEFADQLQIPFLETSAKSATNVEQAFLTMAKQIKDRMGSSTVNNQ 184
Query: 189 GLKKNIFKQKPPE--ADAAASGCC 210
K+ K + + +A GCC
Sbjct: 185 AGGKSTLKVGAGQNVSQQSAGGCC 208
>gi|15236555|ref|NP_193486.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
gi|297800342|ref|XP_002868055.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|75204021|sp|Q9SEH3.1|RAD2C_ARATH RecName: Full=Ras-related protein RABD2c; Short=AtRABD2c; AltName:
Full=Ras-related protein Rab1C; Short=AtRab1C
gi|6651023|gb|AAF22133.1|AF127134_1 ras-related small GTP-binding protein [Arabidopsis thaliana]
gi|7268505|emb|CAB78756.1| ras-related small GTP-binding protein RAB1c [Arabidopsis thaliana]
gi|15529161|gb|AAK97675.1| AT4g17530/dl4800c [Arabidopsis thaliana]
gi|110742819|dbj|BAE99310.1| ras-related small GTP-binding protein RAB1c [Arabidopsis thaliana]
gi|297313891|gb|EFH44314.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|332658507|gb|AEE83907.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
Length = 202
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 130/203 (64%), Gaps = 8/203 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+ YDVT ++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-LDTPSLLAEGS 187
K D S++VV+ + FA E G F+E SAK NV++ F + I S A GS
Sbjct: 122 KCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGS 181
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
K I Q + SGCC
Sbjct: 182 KPPTVQIRGQPVNQ----QSGCC 200
>gi|219126122|ref|XP_002183313.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405069|gb|EEC45013.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 203
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ ++ K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEQDQKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQ-WLHEIDRYAA-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++RVV+ ++G FA G F+E SAKT NV+Q F + +I
Sbjct: 122 KSDLTAKRVVSTEQGKEFADSLGIEFLETSAKTSSNVEQAFLTMASQI 169
>gi|391337937|ref|XP_003743320.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 134/206 (65%), Gaps = 10/206 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVKLQIWD 66
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+ YDVT +++F N+ W +EID Y+ ++ KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGN 124
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA++ F+E SAK NV+Q F+++ I+ + G +
Sbjct: 125 KCDLTTKKVVDHSTAAEFAKQLDIPFLETSAKDSTNVEQAFKKMAEDIM--ARMGPAGGE 182
Query: 189 GLKKN----IFKQKPPEADAAASGCC 210
+K I +P E + SGCC
Sbjct: 183 QIKSQGEGKINPSRPVEPN-KGSGCC 207
>gi|440802525|gb|ELR23454.1| Rasrelated protein ORAB-1, putative [Acanthamoeba castellanii str.
Neff]
Length = 210
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 122/170 (71%), Gaps = 3/170 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++D+LFK+LM+GDSGVGKSSLLL FT D F + TIGVDFK++ V++ GK +K+ IWD
Sbjct: 3 DYDHLFKILMVGDSGVGKSSLLLRFTDDTFTDNFISTIGVDFKIRTVNLDGKVIKMQIWD 62
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA G+I+VYDVT + +F N W EI+ Y+ + +KLLVGN
Sbjct: 63 TAGQERFRTITSSYYRGAHGVILVYDVTDQVSFNNARQ-WLTEIERYACG-NVVKLLVGN 120
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
K D S+RVV+ G FA ++ FIE SAK NV+Q F LV ++ +
Sbjct: 121 KSDLVSKRVVSTATGKEFADQFHLPFIEASAKDGSNVKQAFMTLVKEVYE 170
>gi|383848303|ref|XP_003699791.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Megachile
rotundata]
Length = 200
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
+GNK D E RVV+ + G ARE+G F+E SAK +N+ + F EL IL+
Sbjct: 120 LGNKSDMEDRRVVSTERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILE 172
>gi|449461253|ref|XP_004148356.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
gi|449505222|ref|XP_004162409.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
Length = 202
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 133/208 (63%), Gaps = 18/208 (8%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + +VV+ + FA E G F+E SAK+ NV++ F + +I ++
Sbjct: 122 KCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEI---------KNR 172
Query: 189 GLKKNIFKQKPPEADAAA------SGCC 210
+ + +PP + SGCC
Sbjct: 173 MATQPMNNARPPTVNIRGQPVNQKSGCC 200
>gi|289740161|gb|ADD18828.1| GTPase Rab2 [Glossina morsitans morsitans]
Length = 213
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 140/215 (65%), Gaps = 19/215 (8%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLAE 185
D ES R V K+EG FARE+G +F+E SA+T NV++ F +E+ KI + +
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 186 GSKGLKKNIFKQKPP----------EADAAASGCC 210
+ G+K I +Q P +A +A+SGCC
Sbjct: 181 EANGIK--IGQQHSPTYPALPGTGSQAGSASSGCC 213
>gi|298707797|emb|CBJ30228.1| Rab1B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQ-WLHEIDRYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D E++R VT +E FA G F+E SAK NV++ F + +I
Sbjct: 122 KSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQI 169
>gi|126338784|ref|XP_001365286.1| PREDICTED: ras-related protein Rab-1B-like [Monodelphis domestica]
Length = 201
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 131/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EI+ Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLEEINRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNPTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A+ GCC
Sbjct: 181 GERPNLKIDSSP-VKPASGGCC 201
>gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Solanum tuberosum]
Length = 203
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 130/209 (62%), Gaps = 19/209 (9%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLRIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYASD-NVNKILVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPSLLAEGS 187
K D + RVV+ + FA E G F+E SAK NV+Q F + I + S A S
Sbjct: 122 KADLTANRVVSYETAKAFADEIGIPFLETSAKDATNVEQAFMAMTGAIKNRMASQPASNS 181
Query: 188 KGLKKNIFKQKPPEAD------AAASGCC 210
KPP + + GCC
Sbjct: 182 A---------KPPTVNIRGQPVTQSGGCC 201
>gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus]
Length = 202
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 130/208 (62%), Gaps = 18/208 (8%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +VV+ + FA E G F+E SAK NV+Q F + +I ++
Sbjct: 122 KCDLTENKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI---------KNR 172
Query: 189 GLKKNIFKQKPPEADAAA------SGCC 210
+ + +PP SGCC
Sbjct: 173 MASQPVNNARPPTVQIRGQPVNQKSGCC 200
>gi|145477777|ref|XP_001424911.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833757|emb|CAI39348.1| rab_B10 [Paramecium tetraurelia]
gi|124391978|emb|CAK57513.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 133/213 (62%), Gaps = 16/213 (7%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKL 64
A QQ++DYLFK+L+IG+S VGKSSLLL F+ F E PTIGVDFK++ D+ GK +K+
Sbjct: 2 AFQQDYDYLFKILLIGNSAVGKSSLLLRFSDQIFSESFLPTIGVDFKIRTFDMQGKSVKM 61
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQERF+T+T+SYY+GA GII+ YD+T + +F ++ + W E++ +++ ++ ++L
Sbjct: 62 QIWDTAGQERFKTITASYYKGAHGIILTYDITDKQSFKDIEN-WLAEVEKHAS-ENVVRL 119
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL------- 177
LVGNK D ES+R VT +EG A G FIE SAK NV Q F L I
Sbjct: 120 LVGNKADLESKRQVTYEEGKELADSLGIKFIEASAKANTNVDQAFMTLANNIKAKIGKSE 179
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
D P+ + G KN P+ CC
Sbjct: 180 DKPTPGGKTPTGGLKN------PQPTKKEGTCC 206
>gi|359806422|ref|NP_001241498.1| uncharacterized protein LOC100783333 [Glycine max]
gi|255636244|gb|ACU18462.1| unknown [Glycine max]
Length = 202
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 120/168 (71%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D + +VV+ + FA E G F+E SAK NV+Q F + +I
Sbjct: 122 KCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 169
>gi|350538481|ref|NP_001233833.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053067|gb|AAA80680.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD+T +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQ-WLSEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D R V+ FA E G F+E SAK+ NV+Q F + +I
Sbjct: 122 KSDLNDNRAVSYDTAKAFADEIGIPFMEASAKSATNVEQAFMAMAAEI 169
>gi|260787287|ref|XP_002588685.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
gi|229273853|gb|EEN44696.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
Length = 203
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 131/204 (64%), Gaps = 18/204 (8%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNPKSFDNISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTPSLLA 184
+GNK D E +R+V G N A+E+G F E SAK +N+++ F L IL TPS
Sbjct: 120 IGNKCDMEDKRIVGTDRGENIAKEHGIRFFETSAKANINIEKAFMTLAEDILRKTPS--- 176
Query: 185 EGSKGLKKNIFKQKPPEADAAASG 208
K PEA + A G
Sbjct: 177 -----------KDSGPEAGSVAVG 189
>gi|302835618|ref|XP_002949370.1| RabD/Rab1 [Volvox carteri f. nagariensis]
gi|401686|sp|P31584.1|YPTV1_VOLCA RecName: Full=GTP-binding protein yptV1
gi|170661|gb|AAA34255.1| small G protein [Volvox carteri]
gi|300265197|gb|EFJ49389.1| RabD/Rab1 [Volvox carteri f. nagariensis]
Length = 203
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 131/205 (63%), Gaps = 9/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLAEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV + FA E G F+E SAK NV+Q F + +I + +A
Sbjct: 122 KSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI---KNRMASQPV 178
Query: 189 GLKKNIFKQKPPEA---DAAASGCC 210
K +P E + +S CC
Sbjct: 179 PPKPGGPVVRPTEGKPINNKSSSCC 203
>gi|198415359|ref|XP_002126732.1| PREDICTED: similar to Ras-related protein ORAB-1 [Ciona
intestinalis]
Length = 204
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 128/202 (63%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 6 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 65
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 66 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 123
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV +A F+E SAKT NV+Q F + +I + S
Sbjct: 124 KCDLTTKKVVDYTTAKEYADTLKIPFLETSAKTANNVEQAFMTMAAEIKNRMGPGTAASP 183
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + P D GCC
Sbjct: 184 GQSNKVDISSKP-VDGKQGGCC 204
>gi|38175435|dbj|BAC83185.2| putative ras-related protein [Oryza sativa Japonica Group]
gi|215737480|dbj|BAG96610.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737584|dbj|BAG96714.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767074|dbj|BAG99302.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 215
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 142/212 (66%), Gaps = 6/212 (2%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTI-GVDFKVKYVDVGGKK 61
+ S S+ +FD+L KLL+IGDSGVGKS LLL F+ D F T G+DFKV+ V++ GK+
Sbjct: 4 APSRSRGDFDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKR 63
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
+KL IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ +
Sbjct: 64 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NV 121
Query: 122 IKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT-P 180
K+LVGNKVD +++RVV+ +G A EYG F E SAKT NV+Q F + I
Sbjct: 122 NKILVGNKVDMDTKRVVSTAQGQKLADEYGMKFFETSAKTNQNVEQVFFTIARDIKQRLT 181
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAA--SGCC 210
+A ++ I +Q+P +A A++ S CC
Sbjct: 182 ETVAAAAEPPTIQISRQEPDQAAASSRWSACC 213
>gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum]
gi|738940|prf||2001457H GTP-binding protein
Length = 202
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 132/202 (65%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +VV+ + FA E G F+E SAK NV+Q F + +I + + ++ S
Sbjct: 122 KSDLADNKVVSSETAKAFADEIGIPFMETSAKNANNVEQAFMAMAAEIKN--RMASQPSN 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ + + + SGCC
Sbjct: 180 NARPPTVQIRGQPVN-QKSGCC 200
>gi|123444682|ref|XP_001311109.1| Ras-like GTP-binding protein YPT1 [Trichomonas vaginalis G3]
gi|62736240|gb|AAX97449.1| small Rab GTPase Rab1b [Trichomonas vaginalis]
gi|121892906|gb|EAX98179.1| Ras-like GTP-binding protein YPT1, putative [Trichomonas vaginalis
G3]
Length = 203
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 130/205 (63%), Gaps = 5/205 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLA 65
S +FD LFK+L+IGDSG GKS LL+ F + F + TIGVDFK+K ++V GK +K+
Sbjct: 2 STADFDLLFKVLLIGDSGTGKSCLLIRFAENIFSDNYISTIGVDFKIKTINVDGKTIKMQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
+WDTAGQERFRT+T+SYYRG+ GII+VYDVT RD+F ++ + W KEID + C +L+
Sbjct: 62 VWDTAGQERFRTITASYYRGSNGIILVYDVTNRDSFDHI-NYWMKEIDRLAAPDVC-RLI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
VGNK D +RVVT +EG + A++YG F+E SA NV++ F + + +
Sbjct: 120 VGNKSDLSDKRVVTTEEGQSLAQQYGVSFLETSALGNANVEEMFTAMAKAMRKKQGATSG 179
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
G G N KP + SGC
Sbjct: 180 GENG--GNAVPLKPAKKVEGESGCA 202
>gi|225465202|ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis vinifera]
gi|297739505|emb|CBI29687.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 133/207 (64%), Gaps = 13/207 (6%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
++DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ V++ GK +KL IW
Sbjct: 3 NDYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLL 183
NK D +VV + FA E G F+E SAK +NV+Q F E+ K+ + P+
Sbjct: 121 NKCDLVENKVVDTETAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQPNAT 180
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A S ++ K +P + + S CC
Sbjct: 181 ARSSSTVQ---MKGQPIQQN---SNCC 201
>gi|442755753|gb|JAA70036.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 222
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 117/171 (68%), Gaps = 2/171 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+E+D+LFK+++IGDSG GKSSLLL F D + E + TIGVDFK+K V + +KL IW
Sbjct: 2 KEYDHLFKIIIIGDSGAGKSSLLLRFADDTYSESNMSTIGVDFKIKTVKIDNVTIKLQIW 61
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TS+YYRGA GII VYDVT R +F ++ W +I+ YS+ + KLL+G
Sbjct: 62 DTAGQERFRTITSTYYRGAHGIITVYDVTNRVSFESVKKTWLTDIEKYSS-ANISKLLIG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
NKVD E R VT E FA + +IE SAKT NV++ FE + + D
Sbjct: 121 NKVDLEENRAVTSVEAREFAMQNNMDYIEASAKTAQNVEKAFESIAKTLKD 171
>gi|87295018|gb|ABD36921.1| Rab1 [Pinus pinaster]
Length = 202
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 132/203 (65%), Gaps = 7/203 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYVGSYISTIGVDFKIRTIELDGKAIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT D+F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQ-WLSEIDKYASD-NVSKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-LDTPSLLAEGS 187
K D ++ V ++ +FA E G F+E SAK NV+Q F + ++ S L EG+
Sbjct: 122 KCDLTEKQAVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQLTEGN 181
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
+ K +P + GCC
Sbjct: 182 RKANTVEMKGQPLQQKG---GCC 201
>gi|290982368|ref|XP_002673902.1| rab family small GTPase [Naegleria gruberi]
gi|284087489|gb|EFC41158.1| rab family small GTPase [Naegleria gruberi]
Length = 203
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 130/205 (63%), Gaps = 10/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F+N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTMTSSYYRGAHGIIIVYDVTDQDSFSNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTPSLLAE 185
K D S++ V + FA+ F+E SAK NV+Q F + +I L + + +
Sbjct: 122 KCDLTSKKQVDRSTAEEFAKSLNIPFLETSAKISTNVEQAFMTMAAEIKNRLASQPITTQ 181
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
L KP + GCC
Sbjct: 182 QQPSLGITPAPSKP----QSNGGCC 202
>gi|18422766|ref|NP_568678.1| RAB GTPase-1A [Arabidopsis thaliana]
gi|297794499|ref|XP_002865134.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|75172011|sp|Q9FPJ4.1|RAD2B_ARATH RecName: Full=Ras-related protein RABD2b; Short=AtRABD2b; AltName:
Full=Ras-related protein Rab1A; Short=AtRab1A
gi|11762128|gb|AAG40342.1|AF324990_1 AT5g47200 [Arabidopsis thaliana]
gi|19347885|gb|AAL85999.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21281060|gb|AAM45061.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21553520|gb|AAM62613.1| ras-related small GTP-binding protein-like protein [Arabidopsis
thaliana]
gi|71143080|gb|AAZ23931.1| At5g47200 [Arabidopsis thaliana]
gi|107738243|gb|ABF83667.1| At5g47200 [Arabidopsis thaliana]
gi|110742473|dbj|BAE99155.1| ras-related small GTP-binding protein-like [Arabidopsis thaliana]
gi|297310969|gb|EFH41393.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|332008100|gb|AED95483.1| RAB GTPase-1A [Arabidopsis thaliana]
Length = 202
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 129/202 (63%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+ YDVT ++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S++VV+ + FA E G F+E SAK NV++ F + I + +A
Sbjct: 122 KNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI---KTRMASQPA 178
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G K Q + SGCC
Sbjct: 179 GGAKPPTVQIRGQPVNQQSGCC 200
>gi|89258421|gb|ABD65434.1| Rab10 [Suberites domuncula]
Length = 208
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 136/211 (64%), Gaps = 4/211 (1%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGG 59
M + + ++ +D LFKLL+IGDSGVGK+ +L + D F TIG+DFK+K +++ G
Sbjct: 1 MAAQAVPKKAYDLLFKLLLIGDSGVGKTCVLFRYADDTFNTTFISTIGIDFKIKTIELEG 60
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
K++KL IWDTAGQERF T+T+SYYRGA GII+VYD+T + +F N++ W + I+++++
Sbjct: 61 KRIKLQIWDTAGQERFHTITTSYYRGAMGIILVYDITNQKSFDNITK-WLQNIEMHAS-A 118
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT 179
D ++L+GNK D E+ RVV K G A G F+E SAKT N+++ FE+L +IL
Sbjct: 119 DVERILIGNKCDWEARRVVPKDRGNALAHNQGISFLETSAKTNYNIEEAFEQLAKQILRK 178
Query: 180 PSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
E L N K+ ++D +S CC
Sbjct: 179 VPAKKEDETVLDLNRSKKSTEDSD-KSSKCC 208
>gi|413923309|gb|AFW63241.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
Length = 272
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWDTA
Sbjct: 75 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 134
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGNK
Sbjct: 135 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNKS 192
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
D + +VV + FA E G F+E SAK +NV+Q F + I D
Sbjct: 193 DLTANKVVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASIKD 240
>gi|391337939|ref|XP_003743321.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 136/211 (64%), Gaps = 10/211 (4%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S + ++DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SFREDQYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+ YDVT +++F N+ W +EID Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV FA++ F+E SAK NV+Q F+++ I+ +
Sbjct: 120 LLVGNKCDLTTKKVVDHSTAAEFAKQLDIPFLETSAKDSTNVEQAFKKMAEDIM--ARMG 177
Query: 184 AEGSKGLKKN----IFKQKPPEADAAASGCC 210
G + +K I +P E + SGCC
Sbjct: 178 PAGGEQIKSQGEGKINPSRPVEPN-KGSGCC 207
>gi|197127904|gb|ACH44402.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 217
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 130/199 (65%), Gaps = 7/199 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQER RT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERLRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PS 181
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I P
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 182 LLAEGSKGLKKNIFKQKPP 200
A G++ K N+ Q P
Sbjct: 180 ATAGGAE--KSNVKIQSTP 196
>gi|218199351|gb|EEC81778.1| hypothetical protein OsI_25471 [Oryza sativa Indica Group]
Length = 215
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 133/208 (63%), Gaps = 12/208 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
K D ES+R V +G A EYG F E SAKT +NV+Q F + D LAE
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIA---RDIKQRLAETD 185
Query: 188 KGLKKNIFKQKPPEADAAA-----SGCC 210
+ K PE DA A S CC
Sbjct: 186 SKTEDRTIKINKPEGDAEATTSQKSACC 213
>gi|115471321|ref|NP_001059259.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|33146687|dbj|BAC80082.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|50510010|dbj|BAD30623.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|113610795|dbj|BAF21173.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|215696996|dbj|BAG90990.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636727|gb|EEE66859.1| hypothetical protein OsJ_23656 [Oryza sativa Japonica Group]
Length = 215
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 133/208 (63%), Gaps = 12/208 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
K D ES+R V +G A EYG F E SAKT +NV+Q F + D LAE
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIA---RDIKQRLAETD 185
Query: 188 KGLKKNIFKQKPPEADAAA-----SGCC 210
+ K PE DA A S CC
Sbjct: 186 SKTEDRTIKINKPEGDAEATTLQKSACC 213
>gi|328874798|gb|EGG23163.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 205
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 125/186 (67%), Gaps = 3/186 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWD 68
E D+ FK+L+IGDSGVGKS LLL F D++ + TIGVDFK+K +++ GK +KL IWD
Sbjct: 4 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGAQGII+VYD T +D+F N+ W EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQ-WMGEIDRYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +E+VV + +FA G FIE SAK NV++CF + I + + + E K
Sbjct: 122 KTDLVNEKVVDTNQAKSFAESMGIPFIETSAKNATNVEECFCSMARDIKNRLADIQETPK 181
Query: 189 GLKKNI 194
N+
Sbjct: 182 NDSTNV 187
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/164 (56%), Positives = 115/164 (70%), Gaps = 3/164 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLA 65
S E+DYLFKLL+IGDS VGKS LLL F D + + TIGVDFK++ V++ GK +KL
Sbjct: 2 SASEYDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRT+TSSYYRGA GII+VYDVT R++F N+ W EID Y+++ C KLL
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKQ-WLSEIDRYASDSVC-KLL 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
VGNK D +VV +E FA G F+E SAK +NV+ F
Sbjct: 120 VGNKCDLVDSKVVDTEEAKAFAESLGMNFLETSAKESINVETAF 163
>gi|399217674|emb|CCF74561.1| unnamed protein product [Babesia microti strain RI]
Length = 272
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 126/186 (67%), Gaps = 4/186 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFK+L+IGDSGVGKSSLLL F+ D F + TIGVDFK+K V++ K +KL IWD
Sbjct: 75 EYDYLFKILIIGDSGVGKSSLLLRFSDDTFNDSFLSTIGVDFKIKTVNIDKKSVKLQIWD 134
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYY+GAQGII+VYDVT +++F N+ W +I+ Y+ K+LVGN
Sbjct: 135 TAGQERFRTITSSYYKGAQGIIVVYDVTNKESFDNVKK-WLDDIEKYAA-PSVTKMLVGN 192
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K+D E+ R V + ++A FIE SAK NV++ F L+ + L S GS
Sbjct: 193 KIDVEANRQVKSQTAKDYATSQNMTFIESSAKESTNVERAF-LLMAESLKNSSKTTHGSG 251
Query: 189 GLKKNI 194
KKNI
Sbjct: 252 SAKKNI 257
>gi|332027975|gb|EGI68026.1| Ras-related protein Rab-1A [Acromyrmex echinatior]
Length = 208
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 130/202 (64%), Gaps = 7/202 (3%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +KL IWDTA
Sbjct: 11 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTA 70
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYD T ++TF N+ W +EID Y+ + + KLLVGNK
Sbjct: 71 GQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNKLLVGNKC 128
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELV--LKILDTPSLLAEGSK 188
D +++VV +A + G F+E SAK +NV+Q F + +K+ P
Sbjct: 129 DLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGASDP 188
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K I +P E ++ SGCC
Sbjct: 189 ANKVKIEHGRPIE--SSKSGCC 208
>gi|71019563|ref|XP_760012.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
gi|46099538|gb|EAK84771.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
Length = 209
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 134/206 (65%), Gaps = 7/206 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
+D+L KLL+IGDSGVGKS LLL F D + TIG+DFK++ +++ GK++KL IWD
Sbjct: 5 HYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++V+DVT + +F N+ W I+ +++ + K+L+GN
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVR-TWHANIEQHAS-EGVSKILIGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLA 184
K D E +R VT ++G A+E G +IE SAK+ NV++ F E+ +++DT ++
Sbjct: 123 KSDWEEKRAVTTEQGEELAKELGIPYIETSAKSNSNVEEAFFNLAREVKTRLIDTAAVTQ 182
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
N+ P++ AA GCC
Sbjct: 183 ASPAAAAGNVNVNSAPKSGAAGGGCC 208
>gi|296471468|tpg|DAA13583.1| TPA: ras-related protein Rab-1B [Bos taurus]
Length = 197
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|307187151|gb|EFN72394.1| Ras-related protein Rab-1A [Camponotus floridanus]
Length = 208
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 130/202 (64%), Gaps = 7/202 (3%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +KL IWDTA
Sbjct: 11 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTA 70
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYD T ++TF N+ W +EID Y+ + + KLLVGNK
Sbjct: 71 GQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNKLLVGNKC 128
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELV--LKILDTPSLLAEGSK 188
D +++VV +A + G F+E SAK +NV+Q F + +K+ P
Sbjct: 129 DLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGASDP 188
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K I +P E ++ SGCC
Sbjct: 189 ANKVKIEHGRPIE--SSKSGCC 208
>gi|242057717|ref|XP_002458004.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
gi|241929979|gb|EES03124.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
Length = 203
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 130/202 (64%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D RVV+ + G A E G F+E SAK NV++ F + +I + + S
Sbjct: 122 KCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPAAS- 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + Q + + S CC
Sbjct: 181 GASRPATVQMRGQPVSQQSSCC 202
>gi|156545982|ref|XP_001607208.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Nasonia
vitripennis]
Length = 211
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 132/215 (61%), Gaps = 14/215 (6%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EID Y+ + + K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIDRYACD-NVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV +A + G F+E SAK +NV+Q F + +I S +
Sbjct: 120 LLVGNKSDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEI---KSRV 176
Query: 184 AEGSKGLKKNIFKQKPPEAD--------AAASGCC 210
S G K K + + SGCC
Sbjct: 177 GPPSSGASDQTSKLKIDQGHNIDTSGIQGSKSGCC 211
>gi|218191283|gb|EEC73710.1| hypothetical protein OsI_08312 [Oryza sativa Indica Group]
Length = 206
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 118/169 (69%), Gaps = 3/169 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWDT
Sbjct: 8 LDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNK 125
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
D + +VV+ + FA E G F+E SAK NV+Q F + I D
Sbjct: 126 SDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKD 174
>gi|340720307|ref|XP_003398582.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Bombus
terrestris]
Length = 200
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
+GNK D E +RVV+ G ARE+G F+E SAK +N+ + F EL IL+
Sbjct: 120 LGNKSDMEDKRVVSTARGEAIAREHGIRFMETSAKADINIDRAFNELTEAILE 172
>gi|224138704|ref|XP_002326669.1| predicted protein [Populus trichocarpa]
gi|222833991|gb|EEE72468.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 129/208 (62%), Gaps = 17/208 (8%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F ++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADGSYLDSYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + +VV+ + FA E G FIE SAK NV+Q F + +I +
Sbjct: 122 KSDLTANKVVSYETAKAFADEIGIPFIETSAKNSTNVEQAFMAMAAEI--------KNRM 173
Query: 189 GLKKNIFKQKPPEADAAA------SGCC 210
+ + +PP SGCC
Sbjct: 174 ASQPAMNNARPPTVQIRGQPVNQNSGCC 201
>gi|384482285|pdb|3SFV|A Chain A, Crystal Structure Of The Gdp-Bound Rab1a S25n Mutant In
Complex With The Coiled-Coil Domain Of Lida From
Legionella Pneumophila
Length = 181
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 123/177 (69%), Gaps = 3/177 (1%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGG 59
+ S S+ E+DYLFKLL+IGDSGVGK+ LLL F D + E TIGVDFK++ +++ G
Sbjct: 3 LGSMSSMNPEYDYLFKLLLIGDSGVGKNCLLLRFADDTYTESYISTIGVDFKIRTIELDG 62
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
K +KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ +
Sbjct: 63 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-E 120
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
+ KLLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 121 NVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 177
>gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 203
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 129/209 (61%), Gaps = 19/209 (9%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYASD-GVNKILVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPSLLAEGS 187
K D + RVV+ + FA E G F+E SAK NV+Q F + I + S A S
Sbjct: 122 KSDLTANRVVSYETAKAFADEIGIPFLETSAKDATNVEQAFMAMTSAIKNRMASQPANNS 181
Query: 188 KGLKKNIFKQKPPEAD------AAASGCC 210
KPP + + GCC
Sbjct: 182 A---------KPPTVNIRGQPVTQSGGCC 201
>gi|51468998|emb|CAH17999.1| RAB1-like [Poa pratensis]
Length = 203
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 119/170 (70%), Gaps = 3/170 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
K D ++VV+ + FA E G F+E S K +NV Q F + I D
Sbjct: 122 KCDLTDKKVVSYETAKAFADEIGIPFMETSLKNALNVGQAFMAMSASIKD 171
>gi|301117468|ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|2500076|sp|Q01890.1|YPT1_PHYIN RecName: Full=Ras-like GTP-binding protein YPT1
gi|940432|gb|AAB40355.1| ras related protein PiYpt1 [Phytophthora infestans]
gi|262107811|gb|EEY65863.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|348688420|gb|EGZ28234.1| hypothetical protein PHYSODRAFT_309136 [Phytophthora sojae]
Length = 201
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 129/203 (63%), Gaps = 7/203 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLHEIDRYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++RVV+ FA G F+E SAK NV++ F + +I + K
Sbjct: 122 KSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPVAPK 181
Query: 189 -GLKKNIFKQKPPEADAAASGCC 210
G+K +Q P S CC
Sbjct: 182 AGVKLTPGQQVPSN---GGSKCC 201
>gi|395507954|ref|XP_003758282.1| PREDICTED: ras-related protein Rab-1A [Sarcophilus harrisii]
Length = 329
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 128/200 (64%), Gaps = 4/200 (2%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTA
Sbjct: 133 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 192
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGNK
Sbjct: 193 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 250
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D +++VV FA G F+E SAK NV+Q F + +I A
Sbjct: 251 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 310
Query: 191 KKNIFKQKPPEADAAASGCC 210
K N+ Q P ++ GCC
Sbjct: 311 KSNVKIQSTP-VKQSSGGCC 329
>gi|256073243|ref|XP_002572941.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|1016750|gb|AAA79138.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|353230960|emb|CCD77377.1| rab-related GTP-binding protein [Schistosoma mansoni]
Length = 205
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 5/205 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFK+L+IGDSGVGK+ LL+ + ++F TIG+DFK+K +++ GKK+KL
Sbjct: 2 AKKSYDALFKILLIGDSGVGKTCLLVRYVEESFVPTFISTIGIDFKIKTIELEGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+TSSYYRGA GI+++YD+T R TF N+ + L S + KLL
Sbjct: 62 IWDTAGQERFHTITSSYYRGAMGIMLIYDITSRQTFDNVQTWMNRTFSLASNEVE--KLL 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+ NK D RVV+ +EG A EYG F+E SAK+ NV + FEEL IL S+
Sbjct: 120 IANKCDMAHNRVVSYEEGRQKAEEYGIGFLETSAKSSTNVHKAFEELTRAILHNSSIRRH 179
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
S + + +PP ++ + CC
Sbjct: 180 ESSTVTQVHRLAEPP--NSISGTCC 202
>gi|240849285|ref|NP_001155334.1| ras-related protein Rab-1A [Ovis aries]
gi|238566736|gb|ACR46625.1| RAB1A [Ovis aries]
Length = 204
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 121/173 (69%), Gaps = 3/173 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
>gi|345491599|ref|XP_001606644.2| PREDICTED: ras-related protein Rab-10-like [Nasonia vitripennis]
Length = 200
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ + W + ID ++ N++ K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVN-WLRNIDEHA-NENVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
+GNK D E R V+ + G ARE+G F+E SAK +N+ + F EL ILD
Sbjct: 120 LGNKSDMEDRREVSTERGEAIAREHGIRFMETSAKANINIDRAFRELAEAILD 172
>gi|390979747|gb|AFM30910.1| small GTPase [Hevea brasiliensis]
Length = 203
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + +VV+ + FA E G F+E SAK NV++ F + I + + +
Sbjct: 122 KCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEEAFMAMAADIKNRMASQPAANN 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ + P SGCC
Sbjct: 182 ARPPTVQIRGQPVNQ--KSGCC 201
>gi|156087613|ref|XP_001611213.1| Rab1b [Babesia bovis]
gi|32492050|gb|AAP85297.1| Rab1b [Babesia bovis]
gi|154798467|gb|EDO07645.1| Rab1b [Babesia bovis]
Length = 221
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 116/171 (67%), Gaps = 2/171 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIW 67
+E+DYLFK+++IGDSG GKSSLLL F D + E TIGVDFK+K V + +KL IW
Sbjct: 2 KEYDYLFKIIIIGDSGAGKSSLLLRFADDTYSESYMSTIGVDFKIKTVKIDNVTIKLQIW 61
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TS+YYRGA GII VYDVT R +F ++ W +I+ YS+ + KLL+G
Sbjct: 62 DTAGQERFRTITSTYYRGAHGIITVYDVTSRVSFESVKKTWLVDIEKYSS-ANISKLLIG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
NKVD E R VT E FA + +IE SAKT NV++ FE + + D
Sbjct: 121 NKVDLEDSRAVTYDEAREFAEQNNMDYIEASAKTAQNVEKAFESIARALKD 171
>gi|395544514|ref|XP_003774155.1| PREDICTED: ras-related protein Rab-1B [Sarcophilus harrisii]
Length = 241
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 132/205 (64%), Gaps = 5/205 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLA 65
SQ+ DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL
Sbjct: 41 SQRGSDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 100
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EI+ Y++ ++ KLL
Sbjct: 101 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLEEINRYAS-ENVNKLL 158
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
VGNK D +++VV FA G F+E SAK NV+Q F + +I A
Sbjct: 159 VGNKSDLTTKKVVDNPTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA- 217
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
S G + N+ P A+ GCC
Sbjct: 218 ASGGERPNLKIDSTP-VKPASGGCC 241
>gi|321457381|gb|EFX68468.1| hypothetical protein DAPPUDRAFT_301441 [Daphnia pulex]
Length = 201
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 124/172 (72%), Gaps = 3/172 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 2 AKKSYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N++ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITSVKTFDNIAK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
+GNK D E +R V+K++G ARE+G F+E SAK +N++ F EL IL
Sbjct: 120 LGNKCDVEDKRAVSKEKGEMIAREHGIRFMETSAKANINIESAFYELAQAIL 171
>gi|327287404|ref|XP_003228419.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 212
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 127/192 (66%), Gaps = 3/192 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ G+ +KL IWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGRTIKLQIWD 66
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ +W +EI+ Y++ ++ KL+VGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNMH-LWMEEINRYAS-ENVNKLIVGN 124
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S++ V +A G F+E SAK NV+Q F + +I + S +
Sbjct: 125 KSDLTSKKAVDYTTAKEYADSLGVPFLETSAKNATNVEQAFLTMAAEIKNRVSSGPTQND 184
Query: 189 GLKKNIFKQKPP 200
K N+ Q P
Sbjct: 185 SHKSNLHIQSGP 196
>gi|74826761|sp|Q9TVU5.1|RAB1_THEPA RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1; Short=TpRab1
gi|5764095|gb|AAD51132.1|AF107762_1 small GTP-binding protein rab1 [Theileria parva]
gi|5764097|gb|AAD51133.1|AF107763_1 small GTP-binding protein rab1 [Theileria parva]
Length = 220
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 119/171 (69%), Gaps = 2/171 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIW 67
+E+DYLFK+++IGDSG GKSSLLL F + + E TIGVDFK+K V + +KL IW
Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIW 61
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TS+YYRGA GII VYDVT + +F ++++ W ++ID Y+T+ C KLL+G
Sbjct: 62 DTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
NK+D RVV+ E + A + +IE SAKT NV++ F + + D
Sbjct: 121 NKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKD 171
>gi|284055664|pdb|3JZA|A Chain A, Crystal Structure Of Human Rab1b In Complex With The Gef
Domain Of DrraSIDM FROM LEGIONELLA PNEUMOPHILA
gi|302148858|pdb|3NKV|A Chain A, Crystal Structure Of Rab1b Covalently Modified With Amp At
Y77
gi|302148859|pdb|3NKV|B Chain B, Crystal Structure Of Rab1b Covalently Modified With Amp At
Y77
gi|442570813|pdb|4HLQ|B Chain B, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570815|pdb|4HLQ|D Chain D, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570817|pdb|4HLQ|F Chain F, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570819|pdb|4HLQ|H Chain H, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570821|pdb|4HLQ|J Chain J, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
Length = 175
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 123 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 170
>gi|149062039|gb|EDM12462.1| rCG48149, isoform CRA_d [Rattus norvegicus]
Length = 193
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI 169
>gi|242073190|ref|XP_002446531.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
gi|241937714|gb|EES10859.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
Length = 207
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 127/204 (62%), Gaps = 5/204 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
EFDYLFKLL+IGDS VGKS LL F D++ + TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD+T ++F N+ W EID Y+ + C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLSEIDRYANDTVC-KLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D R V +A E G F+E SAK +NV++ F + I ++ + +
Sbjct: 122 KCDLAESRTVDTSVAQAYAEEIGIPFLETSAKDSINVEEAFLAMSAAIKNSKARSQAALE 181
Query: 189 GLKKNIFKQK--PPEADAAASGCC 210
NI + K P + + S CC
Sbjct: 182 RKPSNIVQMKGQPIQQEQQKSRCC 205
>gi|350417568|ref|XP_003491486.1| PREDICTED: ras-related protein Rab-10-like [Bombus impatiens]
Length = 200
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
+GNK D E +RVV+ G ARE+G F+E SAK +N+ + F EL IL+
Sbjct: 120 LGNKSDMEDKRVVSTGRGEAIAREHGIRFMETSAKADINIDRAFNELTEAILE 172
>gi|413942419|gb|AFW75068.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
gi|413942420|gb|AFW75069.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
Length = 205
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 116/161 (72%), Gaps = 3/161 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ +D+ GK +KL IWD
Sbjct: 6 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDTYISTIGVDFKIRTIDLDGKTVKLQIWD 65
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ C KLLVGN
Sbjct: 66 TAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQ-WLSEIDRYASDNVC-KLLVGN 123
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
K D +VV ++ +FA G FIE SAK +NV++ F
Sbjct: 124 KCDLVDSKVVDTEKAKDFADSLGIPFIETSAKESINVEEAF 164
>gi|296083547|emb|CBI23542.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 130/200 (65%), Gaps = 5/200 (2%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 60
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNKC 118
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D + +VV+ + FA E G F+E SAK NV+Q F + +I + + ++ +
Sbjct: 119 DLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKN--RMASQPAMNT 176
Query: 191 KKNIFKQKPPEADAAASGCC 210
+ Q + SGCC
Sbjct: 177 ARPPTVQIRGQPVNQKSGCC 196
>gi|388582980|gb|EIM23283.1| hypothetical protein WALSEDRAFT_15609 [Wallemia sebi CBS 633.66]
Length = 202
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 120/176 (68%), Gaps = 16/176 (9%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFKVKYVDVGGKKLKLAIW---- 67
FKLL+IG+S VGKSSLLL FT ++F E+ + TIGVDFKVKY+ + K+ KL+IW
Sbjct: 20 FKLLLIGNSSVGKSSLLLRFTENDFLPEEDANATIGVDFKVKYIQIKDKRYKLSIWCVFA 79
Query: 68 -------DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
+TAGQERFR+L SSYYRGAQG+I+VYDVT R+TF L VW +E+D YST+ D
Sbjct: 80 THTHANFNTAGQERFRSLVSSYYRGAQGVILVYDVTNRETFDKLR-VWFQELDTYSTD-D 137
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
+K++VGNK D +R V+ +E A + +F+ECSAKT V F EL K+
Sbjct: 138 AVKIVVGNKTDVNHQRAVSIEEAKELAELHNAMFVECSAKTSTGVNHLFYELAQKV 193
>gi|71019499|ref|XP_759980.1| GTP-binding protein Ypt1 [Ustilago maydis 521]
gi|46099486|gb|EAK84719.1| YPT1_NEUCR GTP-binding protein ypt1 [Ustilago maydis 521]
Length = 208
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 66
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT DTF+N+ W +EID Y+ + KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQ-WLQEIDRYAC-EGVNKLLVGN 124
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV +FA + F+E SAK+ NV+Q F + +I D ++
Sbjct: 125 KSDLTNKKVVEYATAKDFADQLQIPFLETSAKSATNVEQAFLTMAKQIKDRMGSSTVNNQ 184
Query: 189 GLKKNIFK--QKPPEADAAASGCC 210
K+ K Q + + GCC
Sbjct: 185 AGGKSTLKVGQGQNVSQQSNGGCC 208
>gi|449431876|ref|XP_004133726.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 201
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 125/202 (61%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +VV + FA E G F+E SAK NV+Q F + +I SK
Sbjct: 122 KCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKKMGSQPTSSK 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K +P + S CC
Sbjct: 182 SSGNVQMKGQPIQ---QKSSCC 200
>gi|356983948|gb|AET43936.1| Ras-related protein Rab-1A, partial [Reishia clavigera]
Length = 195
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 120/173 (69%), Gaps = 3/173 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
LLVGNK D +++VV + + G F+E SAK NV+Q F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEYTDQLGIPFLETSAKNATNVEQAFMTMAAEI 172
>gi|357123970|ref|XP_003563680.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 135/207 (65%), Gaps = 11/207 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ V++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKVLVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
K D ES+R V +G A EYG F E SAKT +NV+Q F + D L+E
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGITFFETSAKTNLNVEQVFFSIA---RDIKQRLSESD 185
Query: 188 KGLKKNIFKQKPP-EADAAA---SGCC 210
+ K KP EADAA S CC
Sbjct: 186 SKPEGGTIKIKPEGEADAAGAQKSACC 212
>gi|442570869|pdb|4I1O|A Chain A, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570871|pdb|4I1O|C Chain C, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570873|pdb|4I1O|E Chain E, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570875|pdb|4I1O|G Chain G, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
Length = 181
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 123 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 170
>gi|359497565|ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
Length = 207
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 118/166 (71%), Gaps = 3/166 (1%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWDTA
Sbjct: 10 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 69
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGNK
Sbjct: 70 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNKC 127
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
D + +VV+ + FA E G F+E SAK NV+Q F + +I
Sbjct: 128 DLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 173
>gi|426369378|ref|XP_004051668.1| PREDICTED: ras-related protein Rab-1B [Gorilla gorilla gorilla]
Length = 198
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 128/200 (64%), Gaps = 5/200 (2%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTA
Sbjct: 3 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 62
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGNK
Sbjct: 63 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNKS 120
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D +++VV FA G F+E SAK NV+Q F + +I A S G
Sbjct: 121 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASGGE 179
Query: 191 KKNIFKQKPPEADAAASGCC 210
+ N+ P A GCC
Sbjct: 180 RPNLKIDSTP-VKPAGGGCC 198
>gi|148229101|ref|NP_001083268.1| RAB10, member RAS oncogene family [Xenopus laevis]
gi|37747686|gb|AAH60015.1| MGC68629 protein [Xenopus laevis]
Length = 200
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D E +RVV K +G ARE+G F E SAK VN+++ F L IL TP
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANVNIEKAFLTLAEDILRKTP 175
>gi|50553762|ref|XP_504292.1| YALI0E23067p [Yarrowia lipolytica]
gi|1173333|sp|P41924.1|RYL1_YARLI RecName: Full=Ras-like GTP-binding protein RYL1
gi|173257|gb|AAA35245.1| ras-like protein [Yarrowia lipolytica]
gi|49650161|emb|CAG79891.1| YALI0E23067p [Yarrowia lipolytica CLIB122]
gi|1097101|prf||2113252A Rab protein
Length = 203
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 140/210 (66%), Gaps = 12/210 (5%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S SQ+ +D L KLL+IGDSGVGKS LLL F D F TIG+DFK++ +D+G +++K
Sbjct: 2 SHSQRTYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L +WDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + + Y+ N+
Sbjct: 62 LQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIEN-WYQNVQSYA-NEGVEL 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+LVGNK D + +RVV+ ++G A ++G F+E S+KT +NV++CF + +I DT +
Sbjct: 120 ILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKT 179
Query: 184 ---AEGSKGLKKNIFKQKPPEADAAASGCC 210
GS G+ NI + + + +AS CC
Sbjct: 180 KGNESGSGGI--NIAEGE----ENSASKCC 203
>gi|4096662|gb|AAD10389.1| Rab1-like small GTP-binding protein [Petunia x hybrida]
Length = 202
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 128/204 (62%), Gaps = 7/204 (3%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
E+DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ V++ GK +KL IW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ N+ KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLSEIDRYA-NESVCKLLVG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D +VV + G A E G F+E SAK +NV+Q F + +I G+
Sbjct: 121 NKCDLVENKVVDTQTGKALADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQPAGA 180
Query: 188 KGLKKNI-FKQKPPEADAAASGCC 210
K + K +P E S CC
Sbjct: 181 KKTGSTVQIKGQPIE---QKSNCC 201
>gi|170049010|ref|XP_001853751.1| GTP-binding protein Rab-3D [Culex quinquefasciatus]
gi|167870968|gb|EDS34351.1| GTP-binding protein Rab-3D [Culex quinquefasciatus]
Length = 219
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 130/207 (62%), Gaps = 11/207 (5%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
AS Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K++KL
Sbjct: 12 ASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKL 71
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F ++ D W +I YS + + +
Sbjct: 72 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD-WVTQIKTYSWDNAQV-I 129
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT----- 179
LVGNK D E ERV++ + G A + G F E SAK VNV+ FE LV I D
Sbjct: 130 LVGNKCDMEDERVISFERGKQLADQLGVEFFETSAKENVNVKNVFERLVDIICDKMSESL 189
Query: 180 ---PSLLAEGSKGLKKNIFKQKPPEAD 203
P+L+A G KG + Q PP A+
Sbjct: 190 DSDPALVAGGQKGQRLTDQPQGPPNAN 216
>gi|345498195|ref|XP_003428175.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 131/211 (62%), Gaps = 14/211 (6%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
+E DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +KL IW
Sbjct: 2 EEHDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIW 61
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EID Y+ + + KLLVG
Sbjct: 62 DTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIDRYACD-NVNKLLVG 119
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D +++VV +A + G F+E SAK +NV+Q F + +I S + S
Sbjct: 120 NKSDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEI---KSRVGPPS 176
Query: 188 KGLKKNIFKQKPPEAD--------AAASGCC 210
G K K + + SGCC
Sbjct: 177 SGASDQTSKLKIDQGHNIDTSGIQGSKSGCC 207
>gi|313231127|emb|CBY19125.1| unnamed protein product [Oikopleura dioica]
Length = 220
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 136/195 (69%), Gaps = 8/195 (4%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKK 61
+S A+Q+ +DYLFKLL+IGDSGVGK+ LL F ++F TIG+DFK++ V++ GK+
Sbjct: 11 TSIAAQKAYDYLFKLLLIGDSGVGKTCLLFRFAENSFNPTFISTIGIDFKIQTVEIDGKR 70
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
+KL +WDTAGQERFRT+T++YYRGA GI++VYDVT + TF N+++ W K I+ ++ +
Sbjct: 71 IKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTSKKTFENITN-WLKNIEEHAA-EGV 128
Query: 122 IKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI----- 176
+LLV NK D+E +RV+++++G A +G FIECSA T NV++ F + ++
Sbjct: 129 EQLLVANKCDQEDKRVISEEQGQLLAVHHGIDFIECSAMTGENVREAFYRMARRVKTKHE 188
Query: 177 LDTPSLLAEGSKGLK 191
+ A+GSK +K
Sbjct: 189 SKESAQRADGSKSVK 203
>gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum]
gi|738941|prf||2001457J GTP-binding protein
Length = 203
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 125/202 (61%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + RVV+ FA + G F+E SAK NV+ F + I D + +
Sbjct: 122 KSDLTANRVVSYDTAKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRMASQPSANN 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ + P GCC
Sbjct: 182 ARPPTVQIRGQPVGQKG--GCC 201
>gi|226472644|emb|CAX71008.1| Rab-protein 8 [Schistosoma japonicum]
Length = 197
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 131/202 (64%), Gaps = 9/202 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYLFKLL+IGDSGVGKS LL+ F ++F E TIGVDFK++ +D+ GK +KL IWD
Sbjct: 4 DYDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGAQGII+VY VT + +F N+ W +EI+ Y+ N +LLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAQGIIIVY-VTDKTSFINVKS-WLQEIEHYA-NSTVNRLLVGN 120
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D R V + +NFA+E+ F+E SAK +NV+ F E+ +I + + + S
Sbjct: 121 KCDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTAPMQSMSS 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ N + + GCC
Sbjct: 181 NVTVN-----STQPVTKSGGCC 197
>gi|410905863|ref|XP_003966411.1| PREDICTED: ras-related protein Rab-3D-like [Takifugu rubripes]
Length = 222
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 131/206 (63%), Gaps = 3/206 (1%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A+ Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K++KL
Sbjct: 17 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRIKL 76
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G +++YD+T +D+F + D WA +I YS + + +
Sbjct: 77 QIWDTAGQERYRTITTAYYRGAMGFLLMYDITNQDSFKAVQD-WATQIKTYSWDNAQV-I 134
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
LVGNK D E +R+V ++G A E G F E SAK +NV+Q FE LV I D S
Sbjct: 135 LVGNKCDLEDDRLVPTEDGQRLAEELGFQFFEASAKDNINVKQVFERLVDIICDKMSESM 194
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
EG + KQ ++ + +SG C
Sbjct: 195 EGDNNFLSSQGKQSLKDSPSESSGGC 220
>gi|47222415|emb|CAG12935.1| unnamed protein product [Tetraodon nigroviridis]
Length = 200
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D E +RVV K +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILKKTP 175
>gi|290462541|gb|ADD24318.1| Ras-related protein Rab-10 [Lepeophtheirus salmonis]
gi|290562327|gb|ADD38560.1| Ras-related protein Rab-10 [Lepeophtheirus salmonis]
Length = 198
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 127/178 (71%), Gaps = 4/178 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K D+ GKK+KL
Sbjct: 2 AKKSYDLLFKLLLIGDSGVGKTCILFRFSEDTFNTTFISTIGIDFKIKTFDLRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYR A GI++VYDVT +F N++ W + I ++ ++ K++
Sbjct: 62 IWDTAGQERFHTITTSYYRNAMGIMLVYDVTNPKSFDNIAK-WLRNIQEHAA-EEVDKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPSL 182
+GNK D E +RV++K++G +REYG F+E SAKT VN+++ F EL ILD TP +
Sbjct: 120 LGNKCDMEDKRVISKEKGEAISREYGIRFLETSAKTNVNIERAFIELAESILDRTPGI 177
>gi|391343074|ref|XP_003745839.1| PREDICTED: ras-related protein Rab-10-like [Metaseiulus
occidentalis]
Length = 204
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 137/209 (65%), Gaps = 12/209 (5%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELHGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T + +F N++ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNQRSFENIAK-WLRYIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS---- 181
+GNK D E +RV++K +G AR++ F+E SAK +N+++ F +L IL +
Sbjct: 120 LGNKCDMELKRVISKDKGEAIARDHNISFLETSAKANINIEEAFTQLAEAILQKQTSGRA 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
+ A S G+ P E A + CC
Sbjct: 180 VDAATSGGINVG-----PRERPALGANCC 203
>gi|296817263|ref|XP_002848968.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|327301503|ref|XP_003235444.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|238839421|gb|EEQ29083.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|326462796|gb|EGD88249.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|326468927|gb|EGD92936.1| GTP-binding protein ypt1 [Trichophyton tonsurans CBS 112818]
gi|326480093|gb|EGE04103.1| Ras family protein [Trichophyton equinum CBS 127.97]
Length = 201
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T Q KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-QGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D E ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|281350605|gb|EFB26189.1| hypothetical protein PANDA_004764 [Ailuropoda melanoleuca]
Length = 196
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 128/200 (64%), Gaps = 5/200 (2%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNKS 118
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D +++VV FA G F+E SAK NV+Q F + +I A S G
Sbjct: 119 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASGGE 177
Query: 191 KKNIFKQKPPEADAAASGCC 210
+ N+ P A GCC
Sbjct: 178 RPNLKIDSTP-VKPAGGGCC 196
>gi|196011940|ref|XP_002115833.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190581609|gb|EDV21685.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 210
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 136/212 (64%), Gaps = 16/212 (7%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRR+TF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLAE 185
D ES R V K+EG FARE+G +F+E SAKT NV++ F +E+ KI D +
Sbjct: 121 SDLESRRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGAFDINN 180
Query: 186 GSKGLKKNIFKQKP-------PEADAAASGCC 210
+ G+K + Q P P+ + GCC
Sbjct: 181 EANGIK--LGPQNPSNPSTSVPDRPPQSGGCC 210
>gi|410916971|ref|XP_003971960.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Takifugu rubripes]
Length = 201
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D E +RVV K +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus]
Length = 203
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 126/202 (62%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + R V+ FA + G F+E SAK NV+Q F + I + + +
Sbjct: 122 KCDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEQAFMGMSASIKNRMASQPSANN 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + + P SGCC
Sbjct: 182 GRPPTVQIRGQPV--GPKSGCC 201
>gi|167391072|ref|XP_001739628.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896634|gb|EDR23985.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 206
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+E DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK+K V + GK +KL IW
Sbjct: 3 EEKDYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNVKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGAQGII+VY V TF N+ W +EI+ Y++ + IKLL+G
Sbjct: 63 DTAGQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQ-WLQEIERYAS-ETVIKLLIG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
NK D E ER VT ++G A F+E SAK +NV + F ++ I+
Sbjct: 121 NKCDLEDERAVTVEQGQELANSLNVSFMEASAKKSLNVDELFNKIATDIM 170
>gi|157112793|ref|XP_001651875.1| ras-related protein Rab-3C, putative [Aedes aegypti]
gi|108877951|gb|EAT42176.1| AAEL006267-PA [Aedes aegypti]
Length = 219
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 130/207 (62%), Gaps = 11/207 (5%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
AS Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K++KL
Sbjct: 12 ASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKL 71
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F ++ D W +I YS + + +
Sbjct: 72 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD-WVTQIKTYSWDNAQV-I 129
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT----- 179
LVGNK D E ERV++ + G A + G F E SAK VNV+ FE LV I D
Sbjct: 130 LVGNKCDMEDERVISFERGKQLADQLGVEFFETSAKENVNVKNVFERLVDIICDKMSESL 189
Query: 180 ---PSLLAEGSKGLKKNIFKQKPPEAD 203
P+L+A G KG + Q PP A+
Sbjct: 190 DSDPTLVAGGPKGQRLTDQPQGPPNAN 216
>gi|91079074|ref|XP_975225.1| PREDICTED: similar to Rab-protein 10 CG17060-PA [Tribolium
castaneum]
gi|270003655|gb|EFA00103.1| hypothetical protein TcasGA2_TC002919 [Tribolium castaneum]
Length = 203
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 123/176 (69%), Gaps = 3/176 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 181
+GNK D +R V+K+ G ARE+G F+E SAK +N+ + F +L ILD +
Sbjct: 120 LGNKCDMSDKRTVSKERGETIAREHGIRFMETSAKANINIDKAFNDLAEAILDKTA 175
>gi|57008|emb|CAA30005.1| unnamed protein product [Rattus norvegicus]
Length = 220
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 129/208 (62%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT L G+K + +Q PP D A
Sbjct: 192 DTADLAVTGAKQGPQLTDQQAPPHQDCA 219
>gi|339237905|ref|XP_003380507.1| GTP-binding protein YPTC1 [Trichinella spiralis]
gi|316976620|gb|EFV59875.1| GTP-binding protein YPTC1 [Trichinella spiralis]
Length = 200
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 127/201 (63%), Gaps = 4/201 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
FDYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +D+ GK +KL IWDT
Sbjct: 3 FDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIDLDGKTIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+TSSYYRGA GII+VYD++ +++F N+ W EI+ Y+ ++ KLLVGNK
Sbjct: 63 AGQERFRTITSSYYRGAHGIIVVYDISDQESFNNVKQ-WLLEIERYAC-ENVNKLLVGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
D+ +ER V +A + G F+E SAK NV+Q F + +I S + G
Sbjct: 121 SDRTAERAVEYDTAKEYADQLGIPFLETSAKNSTNVEQAFLTMAGEIKRRLSHAVGTAAG 180
Query: 190 LKKNIFKQKPPEADAAASGCC 210
+ + P SGCC
Sbjct: 181 AQPGVRITSTP-VQPQKSGCC 200
>gi|225712878|gb|ACO12285.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 128/202 (63%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F NL W +EI Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQ-WLQEIARYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV +A + F+E SAK NV+Q F + +I + +
Sbjct: 122 KCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNVTNVEQAFMTMAAEIKN--RVGPPAPS 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + P + + +GCC
Sbjct: 180 GPSGQVKIDSTPISSKSGTGCC 201
>gi|212537905|ref|XP_002149108.1| aminopeptidase, putative [Talaromyces marneffei ATCC 18224]
gi|210068850|gb|EEA22941.1| aminopeptidase, putative [Talaromyces marneffei ATCC 18224]
Length = 1176
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 118/173 (68%), Gaps = 3/173 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S + +DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 974 SLTYHRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVK 1033
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + K
Sbjct: 1034 LQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNK 1091
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
LLVGNK D E ++VV FA G F+E SAK+ NV+Q F + +I
Sbjct: 1092 LLVGNKSDMEDKKVVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 1144
>gi|443693080|gb|ELT94523.1| hypothetical protein CAPTEDRAFT_177262 [Capitella teleta]
Length = 206
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 129/208 (62%), Gaps = 4/208 (1%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKL 62
+ S E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ K +
Sbjct: 2 NPGSNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDRKTI 61
Query: 63 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCI 122
KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ +
Sbjct: 62 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ESVN 119
Query: 123 KLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
KLLVGNK D +++VV +A + G F+E SAK NV+Q F + +I +
Sbjct: 120 KLLVGNKCDLTTKKVVDYTTAKEYADQLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGP 179
Query: 183 LAEGSKGLKKNIFKQKPPEADAAASGCC 210
+A K N+ GCC
Sbjct: 180 VAAAGDS-KPNVKINASTPVKQGGGGCC 206
>gi|348517548|ref|XP_003446295.1| PREDICTED: ras-related protein Rab-10-like [Oreochromis niloticus]
Length = 201
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D E +RVV K +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|1370168|emb|CAA98161.1| RAB1D [Lotus japonicus]
Length = 203
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 126/202 (62%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFGDDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + R V+ FA + G F+E SAK NV+Q F + I + + +
Sbjct: 122 KCDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEQAFMAMSASIKNRMASQPSANN 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + + P SGCC
Sbjct: 182 GRPPTVQIRGQPVGQ--KSGCC 201
>gi|121717600|ref|XP_001276098.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
gi|119404296|gb|EAW14672.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
Length = 207
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 118/177 (66%), Gaps = 3/177 (1%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGG 59
M+ Q +DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ G
Sbjct: 1 MNPECCPQPPYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG 60
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
K +KL IWDTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T +
Sbjct: 61 KTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-E 118
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
KLLVGNK D E ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 119 GVNKLLVGNKSDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 175
>gi|16974365|gb|AAL31108.1| AT4g17530/dl4800c [Arabidopsis thaliana]
Length = 202
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+ YDVT ++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D S++VV+ + FA E G F+E SAK NV++ F + I
Sbjct: 122 KCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI 169
>gi|212275502|ref|NP_001130744.1| Ras protein RIC1 [Zea mays]
gi|194690000|gb|ACF79084.1| unknown [Zea mays]
gi|195605598|gb|ACG24629.1| ras-related protein RIC1 [Zea mays]
gi|195606872|gb|ACG25266.1| ras-related protein RIC1 [Zea mays]
gi|223942789|gb|ACN25478.1| unknown [Zea mays]
gi|413950363|gb|AFW83012.1| Ras protein RIC1 [Zea mays]
Length = 203
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 130/202 (64%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D RVV+ + G A + G F+E SAK NV++ F + +I + + S
Sbjct: 122 KCDLAENRVVSYEAGKALADDIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPAAS- 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + Q + + S CC
Sbjct: 181 GASRPATVQMRGQPVSQQSSCC 202
>gi|281501032|pdb|3L0I|B Chain B, Complex Structure Of Sidm/drra With The Wild Type Rab1
gi|281501034|pdb|3L0I|D Chain D, Complex Structure Of Sidm/drra With The Wild Type Rab1
Length = 199
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 120/173 (69%), Gaps = 3/173 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 24 SSXNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 83
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 84 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 141
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
LLVGNK D +++VV FA G F+E SAK NV+Q F +I
Sbjct: 142 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFXTXAAEI 194
>gi|178056588|ref|NP_001116645.1| ras-related protein Rab-1B [Sus scrofa]
gi|122064946|sp|Q06AU7.1|RAB1B_PIG RecName: Full=Ras-related protein Rab-1B
gi|115394758|gb|ABI97173.1| RAB1B [Sus scrofa]
Length = 201
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQER RT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A GCC
Sbjct: 181 GERPNLKIDSTP-VKQAGGGCC 201
>gi|403222703|dbj|BAM40834.1| Ras-related protein Rab-1 [Theileria orientalis strain Shintoku]
Length = 220
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 116/162 (71%), Gaps = 2/162 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIW 67
+E+DYLFK+++IGDSG GKSSLLL F + + E TIGVDFK+K V + +KL IW
Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIW 61
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TS+YYRGA GII VYDVT + +F +++ W ++ID Y+T+ C KLL+G
Sbjct: 62 DTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITQTWLQDIDKYATSNVC-KLLIG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
NK+D RVV+ +E + A + +IE SAKT NV++ F
Sbjct: 121 NKIDLAENRVVSTEEAKHVAEQNNMNYIEASAKTDSNVEKAF 162
>gi|440638868|gb|ELR08787.1| GTP-binding protein ypt1 [Geomyces destructans 20631-21]
Length = 201
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 129/211 (61%), Gaps = 23/211 (10%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL---------DT 179
K D ++VV FA G F+E SAK NV+Q F + +I +
Sbjct: 122 KSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNK 181
Query: 180 PSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
P++ G +G++ +A GCC
Sbjct: 182 PTVQVTGGQGVQS-----------GSAGGCC 201
>gi|88193099|pdb|2FOL|A Chain A, Crystal Structure Of Human Rab1a In Complex With Gdp
Length = 191
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 21 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 80
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 81 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 138
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 139 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 186
>gi|403072070|pdb|4FMC|B Chain B, Espg-Rab1 Complex
gi|403072072|pdb|4FMC|D Chain D, Espg-Rab1 Complex
gi|403072076|pdb|4FMD|B Chain B, Espg-Rab1 Complex Structure At 3.05 A
gi|403072078|pdb|4FMD|D Chain D, Espg-Rab1 Complex Structure At 3.05 A
gi|403072082|pdb|4FME|B Chain B, Espg-Rab1-Arf6 Complex
gi|403072085|pdb|4FME|E Chain E, Espg-Rab1-Arf6 Complex
Length = 171
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 2 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 61
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 119
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 120 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 167
>gi|328849559|gb|EGF98737.1| hypothetical protein MELLADRAFT_73536 [Melampsora larici-populina
98AG31]
Length = 204
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 136/210 (64%), Gaps = 18/210 (8%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+D+LF+LL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDFLFQLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKVVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +DTFTN+ W +EID Y+ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFTNVKQ-WLQEIDRYAC-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD---TPSLLAE 185
K D ++VV +FA + F+E SAK NV+Q F + +I D + + A
Sbjct: 122 KSDLTQKKVVEYTVAKDFADQLSIPFLETSAKNSTNVEQAFLTMAKQIKDRTGSAPVNAT 181
Query: 186 GSK-----GLKKNIFKQKPPEADAAASGCC 210
+K G +N+ Q+P +SGCC
Sbjct: 182 SNKATLKVGSSQNV--QQP-----QSSGCC 204
>gi|346472349|gb|AEO36019.1| hypothetical protein [Amblyomma maculatum]
Length = 200
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 136/205 (66%), Gaps = 7/205 (3%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNTKSFDNIAK-WLRYIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D E +R+++++ G A ++ F+E SAKT VN+++ F EL IL+ +A
Sbjct: 120 LGNKCDMEDKRLISRERGEAVAIDHNIRFMETSAKTNVNIERAFTELAEAILNKQ--MAG 177
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
+ ++ K PPE CC
Sbjct: 178 KDQAENQDRLKVLPPEKKVM--NCC 200
>gi|340374081|ref|XP_003385567.1| PREDICTED: ras-related protein Rab-1A-like [Amphimedon
queenslandica]
Length = 209
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ V++ GK +KL IWD
Sbjct: 6 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVELDGKTIKLQIWD 65
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+V+DVT +++F+N+ VW +EID Y++ C KL+VGN
Sbjct: 66 TAGQERFRTITSSYYRGANGIIIVFDVTDQESFSNVK-VWLQEIDRYASTNVC-KLMVGN 123
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI--LDTPSLLAEG 186
K D +++VV FA + F+E SAK NV+Q F + +I + G
Sbjct: 124 KCDLTNKKVVDFTTAKEFADQLSIPFLETSAKNATNVEQAFMTMAAEIKKVQGNEPAPGG 183
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
G I + +P + + G C
Sbjct: 184 GGGTNVKITQSQPIKDKPNSGGGC 207
>gi|327505561|gb|AEA92308.1| Rab4 [Hevea brasiliensis]
Length = 202
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/162 (56%), Positives = 114/162 (70%), Gaps = 3/162 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
E+DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ V++ GK +KL IW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
NK D +VV + FA E G F+E SAK +NV+Q F
Sbjct: 121 NKCDLVDNKVVDTQTAKAFADELGIPFLETSAKDSINVEQAF 162
>gi|320169952|gb|EFW46851.1| Rab8a protein [Capsaspora owczarzaki ATCC 30864]
Length = 214
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIW 67
+ +DYLFKLL+IGDSGVGK+ +L F+ D F TIG+DFK++ +++ GKK+KL IW
Sbjct: 3 KAYDYLFKLLLIGDSGVGKTCVLFRFSDDAFNATFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+T++YYRGA GI++VYDVT+ TF N+ + W + I+ +++ +D K+++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTQDKTFENIKN-WIRNIEQHAS-EDVEKMILG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
NK D + +RVVTK+ G AREY F E SAK +NV++ F
Sbjct: 121 NKCDVDDKRVVTKERGEQLAREYNVRFFETSAKANINVEEAF 162
>gi|402594067|gb|EJW87994.1| rab family protein 10 [Wuchereria bancrofti]
Length = 203
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 136/207 (65%), Gaps = 8/207 (3%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++++D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 2 AKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID +++ +D K+L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVEKML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D RVV+++ G A ++G F+E SAK + + + F +L ILD + E
Sbjct: 120 LGNKCDMAERRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDKMPIKNE 179
Query: 186 GSKGLKKNIFKQKPPEADAAAS--GCC 210
G+K+ + P+++ A CC
Sbjct: 180 ---GMKQPTIRPAEPQSNVAIGRLSCC 203
>gi|50413456|ref|XP_457265.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
gi|49652930|emb|CAG85266.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
Length = 208
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 129/209 (61%), Gaps = 8/209 (3%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAI 66
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-----DTPS 181
GNK D ++VV FA F+E SA + NV+Q F + +I +T S
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMTNNTSS 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
A + K N+ + A+ CC
Sbjct: 180 GNANNANSGKSNVNLRGQSLTSNQANSCC 208
>gi|330797350|ref|XP_003286724.1| Rab GTPase [Dictyostelium purpureum]
gi|325083322|gb|EGC36778.1| Rab GTPase [Dictyostelium purpureum]
Length = 205
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 123/180 (68%), Gaps = 10/180 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWD 68
E D+ FK+L+IGDSGVGKS LLL F D++ + TIGVDFK+K +++ GK +KL IWD
Sbjct: 6 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 65
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGAQGII+VYD T +D+F N+ W EI+ Y+ ++ KLLVGN
Sbjct: 66 TAGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQ-WMGEIERYAC-ENVNKLLVGN 123
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEEL-------VLKILDTPS 181
K D +E+VV + +FA G FIE SAK NV++CF + + I D+PS
Sbjct: 124 KTDLVNEKVVDSNQAKSFAESMGIPFIETSAKNATNVEECFISMARDIKNRLADIQDSPS 183
>gi|167524781|ref|XP_001746726.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774996|gb|EDQ88622.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 127/202 (62%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYSETYISTIGVDFKIRTIELEGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EI+ Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKESFDNVKQ-WLTEIERYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +S++ V FA E G F+E SAK+ NV+Q F + +I +
Sbjct: 122 KSDLQSKKQVDYTTAKAFADERGIPFLETSAKSATNVEQAFMTMASEIKARMGPAGASND 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K + + + GCC
Sbjct: 182 TSKGTVSMKAGKPVSSGGGGCC 203
>gi|426252524|ref|XP_004019959.1| PREDICTED: ras-related protein Rab-1B [Ovis aries]
Length = 332
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 128/200 (64%), Gaps = 5/200 (2%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTA
Sbjct: 137 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 196
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGNK
Sbjct: 197 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNKS 254
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D +++VV FA G F+E SAK NV+Q F + +I A S G
Sbjct: 255 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASGGE 313
Query: 191 KKNIFKQKPPEADAAASGCC 210
+ N+ P A GCC
Sbjct: 314 RPNLKIDSTP-VKQAGGGCC 332
>gi|326921616|ref|XP_003207053.1| PREDICTED: putative Rab-43-like protein ENSP00000330714-like
[Meleagris gallopavo]
Length = 332
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 111/156 (71%), Gaps = 4/156 (2%)
Query: 38 NFEELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTR 97
+F + GVDFKVK + V G K KLAIWDTAGQERFRTLT SYYRGAQG+I+VYDVTR
Sbjct: 159 HFSACKKSEGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTR 218
Query: 98 RDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIEC 157
RDTF L D W E++ Y T D +K+LVGNK+DKE+ R V + EG+ FAR++ LFIE
Sbjct: 219 RDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEA 276
Query: 158 SAKTRVNVQQCFEELVLKILDTPSLLAEGS--KGLK 191
SAKT VQ FEELV KI+ TP L S KG+K
Sbjct: 277 SAKTCDGVQCAFEELVEKIIQTPGLWESESQNKGVK 312
>gi|162760|gb|AAA30416.1| GTP-binding protein [Bos taurus]
Length = 220
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 129/208 (62%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS++ + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSSDNAQV-L 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 192 DTADPAVTGAKQGPQLTDQQAPPHQDCA 219
>gi|357111244|ref|XP_003557424.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 217
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 140/214 (65%), Gaps = 8/214 (3%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTI-GVDFKVKYVDVGGKK 61
+ S S+ ++D+L KLL+IGDSGVGKS LLL F+ D F T G+DFKV+ V++ G++
Sbjct: 4 APSRSRGDYDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGRR 63
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
+KL IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ +
Sbjct: 64 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NV 121
Query: 122 IKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT-P 180
K+LVGNKVD +++RVV+ +G A EYG F E SAKT NV+Q F + I
Sbjct: 122 NKILVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNQNVEQVFFSIARDIKQRLT 181
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAA----SGCC 210
+A ++ I +Q+P A AA S CC
Sbjct: 182 ETVAAANEPPTIQISRQEPDRAGGAASRWSSSCC 215
>gi|343424940|emb|CBQ68478.1| probable SEC4-like Rab/GTPase [Sporisorium reilianum SRZ2]
Length = 208
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 133/206 (64%), Gaps = 8/206 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
+D+L KLL+IGDSGVGKS LLL F D + TIG+DFK++ +++ GK++KL IWD
Sbjct: 5 HYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++V+DVT + +F N+ W I+ +++ + K+L+GN
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVR-TWHANIEQHAS-EGVSKILIGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLA 184
K D E +R VT ++G ARE G +IE SAK+ NV++ F E+ +++DT ++
Sbjct: 123 KSDWEEKRAVTTEQGEELARELGIPYIETSAKSNANVEEAFFHLAREVKTRLIDTAAVTQ 182
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
N+ P+ AA GCC
Sbjct: 183 ASPAAATGNVNVNSAPKT-GAAGGCC 207
>gi|281202863|gb|EFA77065.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 202
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 129/204 (63%), Gaps = 8/204 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++ YLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT R TF N+ W +EID ++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRVTFDNVRQ-WLQEIDRFAC-ESVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD--TPSLLAEG 186
K D +++VV +FA G F+E SAK NV+Q F + +I + T S A
Sbjct: 122 KSDLVAKKVVDTNTAKSFADTLGIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPAPT 181
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
+ G K P + SGCC
Sbjct: 182 TGGAKVVPGSSAPIQTK---SGCC 202
>gi|224129738|ref|XP_002328790.1| predicted protein [Populus trichocarpa]
gi|222839088|gb|EEE77439.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 125/202 (61%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +VV + FA E G F+E SAK +NV+Q F + +I SK
Sbjct: 122 KCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQPTASK 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K +P E + CC
Sbjct: 182 STGTVQMKGQPIE---QKNNCC 200
>gi|449530083|ref|XP_004172026.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 187
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 116/169 (68%), Gaps = 3/169 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
E+DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ V++ GK +KL IW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
NK D +VV + FA E G F+E SAK NV+Q F + +I
Sbjct: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEI 169
>gi|428184440|gb|EKX53295.1| hypothetical protein GUITHDRAFT_91995 [Guillardia theta CCMP2712]
Length = 201
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ N K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WMNEIDRYA-NDKVNKMLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D +++VV FA + G F+E SAK NV+Q F + +I
Sbjct: 122 KCDLTAKKVVDYNTAKEFADQLGIPFLETSAKDSTNVEQAFITMAAEI 169
>gi|388855810|emb|CCF50594.1| probable GTP-binding protein ypt1 [Ustilago hordei]
Length = 208
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 132/207 (63%), Gaps = 11/207 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 66
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT DTF+N+ W +EID Y+ + KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQ-WLQEIDRYAC-EGVNKLLVGN 124
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-----TPSLL 183
K D +++VV FA + F+E SAK+ NV+Q F + +I D T +
Sbjct: 125 KSDLTNKKVVEYATAKEFADQLQIPFLETSAKSATNVEQAFLTMAKQIKDRMGSSTVNNQ 184
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A G LK + +++ GCC
Sbjct: 185 AGGKSTLKVGAGQNVSQQSNG---GCC 208
>gi|67474604|ref|XP_653051.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|14423577|gb|AAK62471.1|AF389109_1 small GTP-binding protein Rab8 [Entamoeba histolytica]
gi|56469970|gb|EAL47665.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710651|gb|EMD49688.1| small GTP-binding protein Rab8, putative [Entamoeba histolytica
KU27]
Length = 199
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 128/202 (63%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWD 68
E D KLL+IG+SGVGKSSLLL F+ D F + T+G+DF+VK +++ KKLKL IWD
Sbjct: 3 EKDSTIKLLLIGESGVGKSSLLLRFSEDAFNPMYITTVGIDFRVKNIELDNKKLKLQIWD 62
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+ SSYYRG GI++VYD+T R++F N+ + W + I+ + +Q+ K+LVGN
Sbjct: 63 TAGQERFRTIVSSYYRGVMGIVLVYDITSRESFNNI-EYWMRNIEA-NADQNVNKILVGN 120
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D E +RVVT +EG A + G F+E SAK + V CF L ++ + E S+
Sbjct: 121 KCDAEDKRVVTSEEGQQMANKLGIPFLETSAKNSLKVDDCFISLARDVIQR---IGESSQ 177
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ I ++GCC
Sbjct: 178 SAQPGIVDPTQQTQPTESTGCC 199
>gi|432091097|gb|ELK24309.1| Ras-related protein Rab-1B [Myotis davidii]
Length = 212
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 127/200 (63%), Gaps = 5/200 (2%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTA
Sbjct: 17 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 76
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGNK
Sbjct: 77 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNKS 134
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D +++VV FA G F+E SAK NV+Q F + +I + + G
Sbjct: 135 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI--KKRMGPGAATGG 192
Query: 191 KKNIFKQKPPEADAAASGCC 210
++ K A GCC
Sbjct: 193 ERPNLKIDSTPVKPAGGGCC 212
>gi|89027972|gb|ABD59352.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 126/204 (61%), Gaps = 5/204 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
EFDYLFKLL+IGDS VGKS LL F D++ + TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD+T ++F N+ W EID Y+ + C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLSEIDRYANDSVC-KLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D R V +A E G F+E SAK +NV++ F + I + + +
Sbjct: 122 KCDLAESRTVDTSVAQAYAEEIGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALE 181
Query: 189 GLKKNIFKQK--PPEADAAASGCC 210
NI + K P + + S CC
Sbjct: 182 RKPSNIVQMKGQPIQQEQQKSRCC 205
>gi|407039382|gb|EKE39614.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 205
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+E DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK+K V + GK +KL IW
Sbjct: 3 EEKDYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGAQGII+VY V TF N+ W +EI+ Y++ + IKLL+G
Sbjct: 63 DTAGQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQ-WLQEIERYAS-ETVIKLLIG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
NK D E ER VT ++G A F+E SAK +NV + F ++ I+
Sbjct: 121 NKCDLEDERAVTVEQGQELANSLNVSFMEASAKKSLNVDELFIKIATDIM 170
>gi|427787177|gb|JAA59040.1| Putative rab-protein 10 [Rhipicephalus pulchellus]
Length = 200
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 136/205 (66%), Gaps = 7/205 (3%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNTKSFDNIAK-WLRYIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D E +R+++++ G A ++ F+E SAKT VN+++ F EL IL+ +A
Sbjct: 120 LGNKCDMEDKRLISRERGEAVAIDHNIRFMETSAKTNVNIERAFTELAEAILNKQ--MAG 177
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
+ ++ + PPE CC
Sbjct: 178 KDQAENQDRLRVLPPEKKVM--NCC 200
>gi|195042188|ref|XP_001991383.1| GH12621 [Drosophila grimshawi]
gi|193901141|gb|EDW00008.1| GH12621 [Drosophila grimshawi]
Length = 204
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 123/173 (71%), Gaps = 3/173 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
+GNK D +RVV K+ G ARE+ F+E SAK+ +N+++ F EL ILD
Sbjct: 120 LGNKCDMTDKRVVNKERGEAIAREHSIRFMETSAKSNINIERAFCELAEAILD 172
>gi|63102287|gb|AAH94846.1| RAB13 protein, partial [Homo sapiens]
Length = 244
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 130/200 (65%), Gaps = 11/200 (5%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLK 63
SA + +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+K
Sbjct: 40 SAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIK 99
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L +WDTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +
Sbjct: 100 LQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVER 157
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LL+GNK D E++R V K++ ARE+G F E SAK+ +NV + F L IL L
Sbjct: 158 LLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL----LK 213
Query: 184 AEGSKGLKKNIFKQKPPEAD 203
+ G + N KPP D
Sbjct: 214 SGGRRSGNGN----KPPSTD 229
>gi|431922009|gb|ELK19182.1| cAMP-specific 3',5'-cyclic phosphodiesterase 4C [Pteropus alecto]
Length = 900
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 694 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 753
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 754 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 811
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 812 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 871
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 872 DTADPAVTGAKQGPQLTDQQAPPHQDCA 899
>gi|170094132|ref|XP_001878287.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646741|gb|EDR10986.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 204
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 125/185 (67%), Gaps = 9/185 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+D+LFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 5 EYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++FT++ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNESFTHVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD------TPSL 182
K D S++VV FA + F+E SAK NV+Q F + +I D TPS
Sbjct: 123 KSDLTSKKVVEYSVAKEFADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMGSSSTPSG 182
Query: 183 LAEGS 187
A+ S
Sbjct: 183 AAKSS 187
>gi|242807972|ref|XP_002485067.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
gi|218715692|gb|EED15114.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
Length = 201
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D E ++VV FA G F+E SAK+ NV+Q F + +I
Sbjct: 122 KSDMEDKKVVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 169
>gi|221057099|ref|XP_002259687.1| GTPase [Plasmodium knowlesi strain H]
gi|193809759|emb|CAQ40461.1| GTPase, putative [Plasmodium knowlesi strain H]
Length = 200
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 132/201 (65%), Gaps = 6/201 (2%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+D LFK+L+IGDSGVGKS LLL F D + + TIGVDFK+K +++ K +KL IWDT
Sbjct: 5 YDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+TSSYYRGAQGII+VYDVT RD+F N+ + W EI+ Y++ +D K+L+GNK
Sbjct: 65 AGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKN-WIIEIEKYAS-EDVQKILIGNK 122
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
+D +++R V+ +EG A F+E SAK NV+Q F+ + +I + L E +
Sbjct: 123 IDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHEIKNKSQL--ENQQK 180
Query: 190 LKKNIFKQKPPEADAAASGCC 210
+ NI P D CC
Sbjct: 181 GRANINLNAKPIKDNRKK-CC 200
>gi|390470849|ref|XP_002755601.2| PREDICTED: ras-related protein Rab-1B [Callithrix jacchus]
Length = 202
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 130/203 (64%), Gaps = 6/203 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRR-DTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
TAGQERFRT+TSSYYRGA GII+VYDVT + +++ N+ W +EID Y++ ++ KLLVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQGESYANVKQ-WLQEIDRYAS-ENVNKLLVG 121
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-AS 180
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
G + N+ P A GCC
Sbjct: 181 GGERPNLKIDSTP-VKPAGGGCC 202
>gi|291237662|ref|XP_002738747.1| PREDICTED: RAB1A, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 206
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 133/210 (63%), Gaps = 9/210 (4%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFHNVKQ-WLQEIDRYAC-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTP 180
LLVGNK D +++VV +A + F+E SAK NV+Q F + +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAEIKNRMGPG 179
Query: 181 SLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
S+ +G + +K + ++ GCC
Sbjct: 180 SMPQDGKQNVK---IQGASTPVKQSSGGCC 206
>gi|345803013|ref|XP_855128.2| PREDICTED: ras-related protein Rab-13 [Canis lupus familiaris]
Length = 293
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 121/174 (69%), Gaps = 3/174 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLK 63
SA + +D+LFKLL+IGDSGVGK+ L++ F D+F TIG+DFK++ VDV GKK+K
Sbjct: 89 SAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIK 148
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L +WDTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +
Sbjct: 149 LQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVER 206
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
LL+GNK D E++R V K++ I ARE+G F E SAK+ NV + F L IL
Sbjct: 207 LLLGNKCDMEAKRKVQKEQAIKLAREHGIRFFETSAKSSTNVDEAFSSLARDIL 260
>gi|218195930|gb|EEC78357.1| hypothetical protein OsI_18114 [Oryza sativa Indica Group]
gi|222629897|gb|EEE62029.1| hypothetical protein OsJ_16811 [Oryza sativa Japonica Group]
Length = 206
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 115/161 (71%), Gaps = 3/161 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYIDTYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQ-WLSEIDRYASDSVC-KLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
K D +VV +E FA G F+E SAK +NV++ F
Sbjct: 122 KCDLVDSKVVDTEEAKAFAESLGISFLETSAKESINVEEAF 162
>gi|168027123|ref|XP_001766080.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682723|gb|EDQ69139.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 142/215 (66%), Gaps = 14/215 (6%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLK 63
S ++ ++DYL KLL+IGDSGVGKS LLL F+ D+F TIG+DFK++ +++ GK++K
Sbjct: 6 SRARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIK 65
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K
Sbjct: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNK 123
Query: 124 LLVGNKVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILD 178
+LVGNK D ES+R V +G A E+G F E SAKT +NV+ F ++ ++ +
Sbjct: 124 ILVGNKADMDESKRAVPTAKGQALADEFGIKFFETSAKTNMNVEDVFFTIARDIKQRLAE 183
Query: 179 T---PSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
T P A+ + G+K + +P AA S CC
Sbjct: 184 TDSKPEQPAKAAPGVKLSAGGAQPK---AAGSSCC 215
>gi|320167737|gb|EFW44636.1| RAB1 [Capsaspora owczarzaki ATCC 30864]
Length = 205
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W +EID Y++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQ-WLQEIDRYAS-ETVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D +++VV FA + F+E SAK NV+Q F + +I
Sbjct: 122 KSDLTTKKVVDFTTAKEFADQLSIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|327356550|gb|EGE85407.1| GTPase Rab1/YPT1 [Ajellomyces dermatitidis ATCC 18188]
Length = 232
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 118/174 (67%), Gaps = 3/174 (1%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKL 62
+ A+ +DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +
Sbjct: 29 TDANHNRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTV 88
Query: 63 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCI 122
KL IWDTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T +
Sbjct: 89 KLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVN 146
Query: 123 KLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
KLLVGNK D E ++ V FA G F+E SAK+ NV+Q F + +I
Sbjct: 147 KLLVGNKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 200
>gi|126303044|ref|XP_001370866.1| PREDICTED: ras-related protein Rab-10-like [Monodelphis domestica]
Length = 200
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D E +RVV K +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMEDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|157167495|ref|XP_001654824.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|157167497|ref|XP_001654825.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|108882449|gb|EAT46674.1| AAEL002155-PA [Aedes aegypti]
gi|403182468|gb|EJY57406.1| AAEL002155-PB [Aedes aegypti]
Length = 204
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 133/205 (64%), Gaps = 4/205 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D +RVV+ + G + ARE+ F+E SAK +N+++ F EL ILD S E
Sbjct: 120 LGNKCDMTDKRVVSIERGESIAREHDIRFMETSAKANINIERAFRELAEAILDKTS-GKE 178
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
+ + + + + A CC
Sbjct: 179 TTDNPDRVVVNRGTGDKPPAYKACC 203
>gi|358058494|dbj|GAA95457.1| hypothetical protein E5Q_02111 [Mixia osmundae IAM 14324]
Length = 384
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 116/161 (72%), Gaps = 3/161 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+D LFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ +++GGK +KL IWD
Sbjct: 137 EYDLLFKLLLIGDSGVGKSCLLLRFADDSYSDSYISTIGVDFKIRTIELGGKTVKLQIWD 196
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +DTF+N+ W +EID Y+ + KLLVGN
Sbjct: 197 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFSNVKQ-WLQEIDRYAC-EGVDKLLVGN 254
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
K D + ++VV FA + F+E SAK NV+Q F
Sbjct: 255 KSDLQQKKVVDYTVAKEFADQLAIPFLETSAKNATNVEQAF 295
>gi|85001490|ref|XP_955461.1| small GTP-binding protein Rab1 [Theileria annulata strain Ankara]
gi|74951238|sp|Q4UB16.1|RAB1_THEAN RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1
gi|65303607|emb|CAI75985.1| small GTP-binding protein Rab1, putative [Theileria annulata]
Length = 220
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 118/171 (69%), Gaps = 2/171 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIW 67
+E+DYLFK+++IGDSG GKSSLLL F + + E TIGVDFK+K V + +KL IW
Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIW 61
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TS+YYRGA GII VYDVT + +F ++++ W ++ID Y+T+ C KLL+G
Sbjct: 62 DTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
NK+D RVV E + A + +IE SAKT NV++ F + + D
Sbjct: 121 NKIDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKD 171
>gi|7533034|gb|AAF63333.1|AF244545_1 YptA [Aspergillus awamori]
Length = 201
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTMKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D E ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|346324592|gb|EGX94189.1| GTP-binding protein ypt1 [Cordyceps militaris CM01]
Length = 215
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 120/177 (67%), Gaps = 3/177 (1%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGG 59
+ ++ A+ + +DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ G
Sbjct: 8 ITANQATARRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG 67
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
K +KL IWDTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T +
Sbjct: 68 KTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-E 125
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
KLLVGNK D ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 126 GVNKLLVGNKSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 182
>gi|254583504|ref|XP_002497320.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
gi|238940213|emb|CAR28387.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
Length = 209
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 133/208 (63%), Gaps = 9/208 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IG+SGVGKS LLL F+ D + + TIGVDFK+K VD+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVDLDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRG+ GII+VYDVT +++F + +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVK-MWLQEIDRYATST-VLKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + +RVV FA FIE SA NV++ F + +I D+ +
Sbjct: 122 KCDLKDKRVVEYDVAKEFADANKMPFIETSALDSTNVEEAFLTMARQIKDSMAQQQRHDG 181
Query: 189 GLKK------NIFKQKPPEADAAASGCC 210
G N+ + +++A+GCC
Sbjct: 182 GAANGQNENGNVNLKGQSLTNSSANGCC 209
>gi|444510207|gb|ELV09542.1| Kinesin light chain 2 [Tupaia chinensis]
Length = 1051
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 117/166 (70%), Gaps = 3/166 (1%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDTA
Sbjct: 684 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 743
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGNK
Sbjct: 744 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNKS 801
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 802 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 847
>gi|417408833|gb|JAA50952.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 121/174 (69%), Gaps = 3/174 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLK 63
SA + +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+K
Sbjct: 24 SAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIDGKKIK 83
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L +WDTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +
Sbjct: 84 LQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVER 141
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
LL+GNK D E++R V K++ ARE+G F E SAK+ +NV + F L IL
Sbjct: 142 LLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 195
>gi|50540198|ref|NP_001002566.1| ras-related protein Rab-10 [Danio rerio]
gi|49902983|gb|AAH76234.1| Zgc:92757 [Danio rerio]
Length = 201
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D E +RVV K +G A+E+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILKKTP 175
>gi|41055496|ref|NP_957436.1| ras-related protein Rab-1B [Danio rerio]
gi|28839092|gb|AAH47816.1| Zgc:56049 [Danio rerio]
gi|182889374|gb|AAI65006.1| Zgc:56049 protein [Danio rerio]
Length = 201
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 131/204 (64%), Gaps = 9/204 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA F+E SAK NV+Q F + +I + G+
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAT 178
Query: 189 --GLKKNIFKQKPPEADAAASGCC 210
G K N+ + P + GCC
Sbjct: 179 TGGDKPNLKIESTP-VRQSGGGCC 201
>gi|432946632|ref|XP_004083834.1| PREDICTED: ras-related protein Rab-10-like [Oryzias latipes]
Length = 201
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD++ +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDISNTKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D E +RVV K +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILKKTP 175
>gi|390346096|ref|XP_781611.3| PREDICTED: ras-related protein Rab-1A isoform 2 [Strongylocentrotus
purpuratus]
Length = 212
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 129/203 (63%), Gaps = 8/203 (3%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDT
Sbjct: 14 IDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVIKLQIWDT 73
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGNK
Sbjct: 74 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 131
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLLAEGS 187
D +++VV +A + F+E SAK NV+Q F + +I + P + GS
Sbjct: 132 CDLTTKKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAEIKNRMGPGSVPSGS 191
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
K N + SGCC
Sbjct: 192 SHDKIN---PSTTPVKPSGSGCC 211
>gi|358248394|ref|NP_001239874.1| uncharacterized protein LOC100796206 [Glycine max]
gi|414832|gb|AAA34003.1| Rab7p [Glycine max]
Length = 201
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 116/169 (68%), Gaps = 3/169 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
E+DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ V++ GK +KL IW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDTVC-KLLVG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
NK D +VV FA E G F+E SAK +NV+Q F + +I
Sbjct: 121 NKSDLVDNKVVDSLTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEI 169
>gi|131847|sp|P22127.1|RAB10_DISOM RecName: Full=Ras-related protein Rab-10; Short=ORA1
gi|213115|gb|AAA49230.1| GTP-binding protein [Discopyge ommata]
Length = 200
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 123/176 (69%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TP 180
+GNK D E +RVV K +G ARE+ F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQKTP 175
>gi|402881745|ref|XP_003904425.1| PREDICTED: ras-related protein Rab-1B-like [Papio anubis]
Length = 201
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 128/202 (63%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERF+T+TSSYY GA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFQTITSSYYLGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I + +
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI--KKRMWPGAAS 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G ++ K A GCC
Sbjct: 180 GGERPNLKIDSTPVKPAGGGCC 201
>gi|347964252|ref|XP_311197.3| AGAP000671-PA [Anopheles gambiae str. PEST]
gi|333467445|gb|EAA06827.3| AGAP000671-PA [Anopheles gambiae str. PEST]
Length = 204
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 130/205 (63%), Gaps = 4/205 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D +R V K+ G N ARE+ F+E SAK N++ F EL ILD + E
Sbjct: 120 LGNKCDMADKRAVRKERGENIAREHDIRFMETSAKANTNIELAFRELAEAILDKVA-GKE 178
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
+ + + + E A CC
Sbjct: 179 TTDNPDRVVVNRSTGERLPAYKACC 203
>gi|387017924|gb|AFJ51080.1| ras-related protein Rab-10-like [Crotalus adamanteus]
Length = 189
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 122/172 (70%), Gaps = 3/172 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
+GNK D + +RVV K +G ARE+G F E SAK +N+++ F L IL
Sbjct: 120 LGNKCDMDDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 171
>gi|452986636|gb|EME86392.1| hypothetical protein MYCFIDRAFT_72600 [Pseudocercospora fijiensis
CIRAD86]
Length = 201
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 126/202 (62%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV FA G F+E SAK NV+Q F + +I + A +K
Sbjct: 122 KSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGNTAINNK 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ Q +A GCC
Sbjct: 182 PTVQ--VGQGSNVQSGSAGGCC 201
>gi|367011297|ref|XP_003680149.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
gi|359747808|emb|CCE90938.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
Length = 208
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 133/207 (64%), Gaps = 8/207 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IG+SGVGKS LLL F+ D + + TIGVDFK+K V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRG+ GII+VYDVT +++F + +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVK-MWLQEIDRYATST-VLKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL----- 183
K D E +RVV FA F+E SA NV+Q F + +I D+ +
Sbjct: 122 KCDLEDKRVVEYDVAREFAEANKMPFLETSALDSTNVEQAFLTMAKQIKDSMAQQHARDG 181
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
+K + N+ + + A +GCC
Sbjct: 182 GSNAKDDQGNVNLKGQSLTNNAGNGCC 208
>gi|410222046|gb|JAA08242.1| RAB13, member RAS oncogene family [Pan troglodytes]
Length = 203
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 128/196 (65%), Gaps = 11/196 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +DYLFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+KL +W
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D E++R V K++ ARE+G F E SAK+ +NV + F L IL L + G
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL----LKSGGR 176
Query: 188 KGLKKNIFKQKPPEAD 203
+ N KPP D
Sbjct: 177 RSGNGN----KPPSTD 188
>gi|449492192|ref|XP_004175545.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Taeniopygia
guttata]
Length = 170
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 90/145 (62%), Positives = 106/145 (73%), Gaps = 2/145 (1%)
Query: 44 PTIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTN 103
P GVDFKVK + V G K KLAIWDTAGQERFRTLT SYYRGAQG+I+VYDVTRRDTF
Sbjct: 2 PISGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVK 61
Query: 104 LSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRV 163
L D W E++ Y T D +++LVGNK+DKE+ R V + EG+ FAR++ LFIE SAKT
Sbjct: 62 L-DNWLNELETYCTRNDIVQMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCD 119
Query: 164 NVQQCFEELVLKILDTPSLLAEGSK 188
VQ FEELV KI+ TP L S+
Sbjct: 120 GVQCAFEELVEKIIQTPGLWESESQ 144
>gi|390476751|ref|XP_003735179.1| PREDICTED: ras-related protein Rab-13-like [Callithrix jacchus]
Length = 203
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 128/196 (65%), Gaps = 11/196 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D E++R V K++ ARE+G F E SAK+ +NV + F L IL L + G
Sbjct: 121 NKCDMEAKRKVQKEQANKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL----LKSGGR 176
Query: 188 KGLKKNIFKQKPPEAD 203
+ N KPP D
Sbjct: 177 RSGNSN----KPPSTD 188
>gi|354544141|emb|CCE40864.1| hypothetical protein CPAR2_109020 [Candida parapsilosis]
Length = 206
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 131/208 (62%), Gaps = 8/208 (3%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAI 66
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI----LDTPSL 182
GNK D +++V FA F+E SA + NV+Q F + +I ++
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAHMVNNNVG 179
Query: 183 LAEGSKGLKKNIFKQKPPEADAAASGCC 210
A G+KG K N+ + ++ CC
Sbjct: 180 TAAGNKG-KTNVNLRGESLTSNQSNSCC 206
>gi|320592964|gb|EFX05373.1| GTP-binding protein ypt1 [Grosmannia clavigera kw1407]
Length = 202
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 128/212 (60%), Gaps = 24/212 (11%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD---------- 178
K D ++VV + FA G F+E SAK NV+Q F + +I +
Sbjct: 122 KSDMSEKKVVDYQVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQIKERMGSTATNNT 181
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
PS+ G+ N ++ GCC
Sbjct: 182 KPSVQVGAGHGVSNN-----------SSGGCC 202
>gi|115916189|ref|XP_788933.2| PREDICTED: ras-related protein Rab-10 isoform 2 [Strongylocentrotus
purpuratus]
Length = 224
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 132/203 (65%), Gaps = 9/203 (4%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDN---FEELSPTIGVDFKVKYVDVGGKKLKLAIW 67
+DY+FK+L+IGDS VGK++L+ F++ + + TIG+DFK+K V++ GKK+KL IW
Sbjct: 27 YDYIFKVLVIGDSYVGKTALITIFSTGRASPYRDYQTTIGIDFKIKTVELNGKKIKLQIW 86
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF T+T+SYYRGA GI++VYD+T+ TF N++ W + I ++ N+D K+L+G
Sbjct: 87 DTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAK-WLRNIQEHA-NEDVEKMLLG 144
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D + +R++ K G A+E G F+E SAK +NV+Q F L IL GS
Sbjct: 145 NKCDMDDKRMINKDRGETIAKENGIKFMETSAKANINVEQAFMTLAADILKKYPQRDTGS 204
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
G+ K K E ++ S CC
Sbjct: 205 PGVVKPDMK----EGSSSGSKCC 223
>gi|442756017|gb|JAA70168.1| Putative gtp-binding protein [Ixodes ricinus]
Length = 200
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 135/205 (65%), Gaps = 7/205 (3%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNSKSFDNIAK-WLRYIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D E +R+V+++ G A ++G F+E SAKT VN++ F EL IL+ +A
Sbjct: 120 LGNKCDMEDKRLVSRERGNAVAIDHGIRFMETSAKTNVNIEFAFTELAEAILNKQ--MAG 177
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
++ + PPE CC
Sbjct: 178 KDLAENQDRLRVLPPE--KRVMNCC 200
>gi|89027974|gb|ABD59353.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 126/204 (61%), Gaps = 5/204 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
EFDYLFKLL+IGDS VGKS LL F D++ + TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD+T ++F N + W EID Y+ + C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNN-AKQWLSEIDRYANDSVC-KLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D R V +A E G F+E SAK +NV++ F + I + + +
Sbjct: 122 KCDLAESRTVDTSVAQAYAEEIGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALE 181
Query: 189 GLKKNIFKQK--PPEADAAASGCC 210
NI + K P + + S CC
Sbjct: 182 RKPSNIVQMKGQPIQQEQQKSRCC 205
>gi|410987028|ref|XP_003999810.1| PREDICTED: ras-related protein Rab-13 [Felis catus]
Length = 203
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 129/199 (64%), Gaps = 11/199 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVQRLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D E++R V K++ ARE+G F E SAK+ NV + F L I LL G
Sbjct: 121 NKCDMEAKRRVRKEQADQLAREHGIRFFETSAKSSTNVDEAFSSLARDI-----LLKSGG 175
Query: 188 KGLKKNIFKQKPPEADAAA 206
+++ +PP AD A
Sbjct: 176 ---RRSGNSHRPPGADLRA 191
>gi|444705937|gb|ELW47313.1| Nuclear pore membrane glycoprotein 210-like protein [Tupaia
chinensis]
Length = 2031
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 121/174 (69%), Gaps = 3/174 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLK 63
SA + +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+K
Sbjct: 1827 SAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKKIK 1886
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L +WDTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +
Sbjct: 1887 LQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVER 1944
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
LL+GNK D E++R V K++ ARE+G F E SAK+ +NV + F L IL
Sbjct: 1945 LLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDIL 1998
>gi|170592955|ref|XP_001901230.1| Ras-related protein Rab-10 [Brugia malayi]
gi|158591297|gb|EDP29910.1| Ras-related protein Rab-10, putative [Brugia malayi]
Length = 226
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 135/207 (65%), Gaps = 8/207 (3%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++++D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 25 AKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 84
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID +++ +D K+L
Sbjct: 85 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVEKML 142
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D RVV+++ G A ++G F+E SAK + + + F +L ILD + E
Sbjct: 143 LGNKCDMAERRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDKMPIKNE 202
Query: 186 GSKGLKKNIFKQKPPEADAAAS--GCC 210
G+K+ + P+ + A CC
Sbjct: 203 ---GMKQPTIRPAEPQNNVAIGRLSCC 226
>gi|348544653|ref|XP_003459795.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
gi|410906535|ref|XP_003966747.1| PREDICTED: ras-related protein Rab-1A-like [Takifugu rubripes]
Length = 201
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 129/204 (63%), Gaps = 9/204 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLLAEG 186
K D +++VV FA F+E SAK NV+Q F + +I P A G
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGG 181
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
K N+ P + GCC
Sbjct: 182 D---KPNLKIDSTP-VRQSGGGCC 201
>gi|226509821|ref|NP_001141291.1| uncharacterized protein LOC100273382 [Zea mays]
gi|194703818|gb|ACF85993.1| unknown [Zea mays]
gi|195624662|gb|ACG34161.1| ras-related protein ARA-3 [Zea mays]
gi|414588872|tpg|DAA39443.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 214
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 135/207 (65%), Gaps = 11/207 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ V++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRVKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG- 186
K D ES+R V G A EYG F E SAKT +NV+Q F + D LAE
Sbjct: 129 KADMDESKRAVPTSRGQALADEYGIKFFETSAKTNLNVEQVFFSIA---RDIKQRLAESD 185
Query: 187 SKGLKKNIFKQKPPEADAAA---SGCC 210
SK + I +P +A+A S CC
Sbjct: 186 SKPEDRTISINRPEGGEASASQKSACC 212
>gi|255719125|ref|XP_002555843.1| KLTH0G18788p [Lachancea thermotolerans]
gi|238937227|emb|CAR25406.1| KLTH0G18788p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 132/204 (64%), Gaps = 6/204 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F+ D + + TIGVDFK+K V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT D+F ++ +W +EID Y+T +KL+VGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDHDSFNDVK-MWLQEIDRYAT-AGVLKLMVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE--G 186
K D + +R+V FA F+E SA NV++ F + +I ++ + + G
Sbjct: 122 KSDLQDKRMVEYDVAKEFADSLQIPFLETSALDSSNVEEAFLTMAKQIKESMAQQHKDTG 181
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
K K N+ K A+ GCC
Sbjct: 182 KKDDKANV-NLKGQSLSNASGGCC 204
>gi|255730689|ref|XP_002550269.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
gi|240132226|gb|EER31784.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
Length = 207
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAI 66
E+DYLFKLL+IGDSGVGKSSLLL F D + + TIGVDFK++ +++ GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSSLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
GNK D ++VV FA F+E SA + NV+Q F + +I
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|405964668|gb|EKC30125.1| Ras-related protein Rab-8A [Crassostrea gigas]
Length = 207
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 129/199 (64%), Gaps = 3/199 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYLFKLL+IGDSGVGK+ +L F+ D F TIG+DFK++ +++ GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ +++ QD K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRN-WIRNIEEHAS-QDVDKMILGNK 122
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
D +RVV+K++G A E+G F+E SAK +NV+ F L I E S
Sbjct: 123 CDMNDKRVVSKEKGEALAIEHGIKFMETSAKASINVEDAFFTLARDIKAKMDRKLESSNA 182
Query: 190 LKKNIFKQKPPEADAAASG 208
KN P + A SG
Sbjct: 183 QAKNAGGITPGKTQAKKSG 201
>gi|414588871|tpg|DAA39442.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 228
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 135/207 (65%), Gaps = 11/207 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ V++ GK++KL IWD
Sbjct: 25 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRVKLQIWD 84
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 85 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 142
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG- 186
K D ES+R V G A EYG F E SAKT +NV+Q F + D LAE
Sbjct: 143 KADMDESKRAVPTSRGQALADEYGIKFFETSAKTNLNVEQVFFSIA---RDIKQRLAESD 199
Query: 187 SKGLKKNIFKQKPPEADAAA---SGCC 210
SK + I +P +A+A S CC
Sbjct: 200 SKPEDRTISINRPEGGEASASQKSACC 226
>gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum]
gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738942|prf||2001457K GTP-binding protein
gi|1098293|prf||2115367A small GTP-binding protein
Length = 202
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D R V + FA E G F+E SAK NV+Q F + I
Sbjct: 122 KCDLTENRAVPYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSI 169
>gi|308475031|ref|XP_003099735.1| CRE-RAB-10 protein [Caenorhabditis remanei]
gi|308266390|gb|EFP10343.1| CRE-RAB-10 protein [Caenorhabditis remanei]
Length = 201
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 134/205 (65%), Gaps = 6/205 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 2 ARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID +++ +D +K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D RVV+++ G A+++G F E SAK V+V F +L IL + + E
Sbjct: 120 LGNKCDMSDRRVVSRERGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAIL---AKMPE 176
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
+ ++ P+ ++ GCC
Sbjct: 177 STDEQSRDTVNPVQPQRPGSSGGCC 201
>gi|221219526|gb|ACM08424.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D E +RVV K +G ARE+G F E SAK V++++ F L IL TP
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANVSIEKAFLTLAEDILRKTP 175
>gi|449016131|dbj|BAM79533.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 209
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 134/210 (63%), Gaps = 8/210 (3%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDV-GGKKLKL 64
S +FDYLFKLL+IGDSGVGKS LLL F +F + TIGVDFK+K + GK +KL
Sbjct: 2 STTDFDYLFKLLLIGDSGVGKSCLLLRFAEGSFSDSFMSTIGVDFKIKSLQFEDGKVVKL 61
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQERFRT+TSSYYRGA GII+V+DVT ++F N++ W EI+ Y++ C KL
Sbjct: 62 QIWDTAGQERFRTITSSYYRGAHGIIIVFDVTDEESFKNVTS-WISEIENYASESVC-KL 119
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
LVGNK D +RVVT+++ A+ G +IE SAKT +V++ F + +I + LA
Sbjct: 120 LVGNKTDLTEQRVVTRQQAEELAQRLGIPYIETSAKTADHVEEAFVMMTKEIRNRTGNLA 179
Query: 185 ----EGSKGLKKNIFKQKPPEADAAASGCC 210
G+ + + + E + + GCC
Sbjct: 180 LAKGSGAGTSRSGVDVRAETEQVSQSGGCC 209
>gi|409041681|gb|EKM51166.1| hypothetical protein PHACADRAFT_187742 [Phanerochaete carnosa
HHB-10118-sp]
Length = 252
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 127/201 (63%), Gaps = 24/201 (11%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF---EELSPTIGVDFK-------- 51
SS A+ Q + KLL+IG+S VGKSSLLL F+ + + +E S TIGVDF+
Sbjct: 4 SSQAATQPIN--VKLLLIGNSSVGKSSLLLRFSDEQWVPEDEASATIGVDFRHKASLQHV 61
Query: 52 ---------VKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFT 102
V +D+ GKK+KL+IWDTAGQERFRT+TSSYYRGA G+I+VYDV R++F
Sbjct: 62 EMSLRLGALVHKMDIDGKKVKLSIWDTAGQERFRTITSSYYRGAHGVILVYDVANRESFD 121
Query: 103 NLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTR 162
L W E++ Y N +K++VGNKVDKE R VT EG +FA LF E SAKT
Sbjct: 122 ALPR-WYNELETY-VNPKVVKMVVGNKVDKEYSRQVTYSEGQHFATRMNSLFFEASAKTA 179
Query: 163 VNVQQCFEELVLKILDTPSLL 183
V V F+E+V +I+ P L+
Sbjct: 180 VGVADAFKEVVRRIVAEPELV 200
>gi|407038762|gb|EKE39296.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 199
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 127/200 (63%), Gaps = 6/200 (3%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWDTA 70
D KLL+IG+SGVGKSSLLL F+ D F + T+G+DF+VK +++ KKLKL IWDTA
Sbjct: 5 DSTIKLLLIGESGVGKSSLLLRFSEDAFNPMYITTVGIDFRVKNIELDNKKLKLQIWDTA 64
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+ SSYYRG GI++VYD+T R++F N+ + W + I+ + +Q+ K+LVGNK
Sbjct: 65 GQERFRTIVSSYYRGVMGIVLVYDITSRESFNNI-EYWMRNIEA-NADQNVNKILVGNKC 122
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D E +RVVT +EG A + G F+E SAK + V CF L ++ + E S+
Sbjct: 123 DAEDKRVVTSEEGQQMANKLGIPFLETSAKNSLKVDDCFISLARDVIQR---IGESSQSA 179
Query: 191 KKNIFKQKPPEADAAASGCC 210
+ I ++GCC
Sbjct: 180 QPGIVDPTQQTQPTESTGCC 199
>gi|62858351|ref|NP_001016426.1| RAB3A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89273837|emb|CAJ83688.1| RAB3A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89273838|emb|CAJ83689.1| RAB3A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134024095|gb|AAI35627.1| RAB3A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 220
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLAEHLGFEFFEASAKDNINVKQTFERLVDIICEKMSESL 191
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 192 DTADPAVTGAKQGPQLTDQQAPPHQDCA 219
>gi|325303620|tpg|DAA34562.1| TPA_exp: RAS oncogene family member RAB1 [Amblyomma variegatum]
Length = 206
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 127/204 (62%), Gaps = 7/204 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQIWD 66
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+ YDVT +++F N+ W +EID Y+ ++ KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGN 124
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLLAEG 186
K D +++VV FA + G F+E SAK NV+Q F + + + P
Sbjct: 125 KCDLTTKKVVDYTTAKEFADQLGIPFLETSAKNATNVEQAFMTMAAENKNRMGPPTTEAN 184
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
+G I P SGCC
Sbjct: 185 LRGGDGKINPGTP--VQPRGSGCC 206
>gi|156095590|ref|XP_001613830.1| small GTPase Rab1A [Plasmodium vivax Sal-1]
gi|148802704|gb|EDL44103.1| small GTPase Rab1A, putative [Plasmodium vivax]
Length = 200
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 132/201 (65%), Gaps = 6/201 (2%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+D LFK+L+IGDSGVGKS LLL F D + + TIGVDFK+K +++ K +KL IWDT
Sbjct: 5 YDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+TSSYYRGAQGII+VYDVT RD+F N+ + W EI+ Y++ +D K+L+GNK
Sbjct: 65 AGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKN-WIIEIEKYAS-EDVQKVLIGNK 122
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
+D +++R V+ +EG A F+E SAK NV+Q F+ + +I + L E +
Sbjct: 123 IDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHEIKNKSQL--ENQQK 180
Query: 190 LKKNIFKQKPPEADAAASGCC 210
+ NI P D CC
Sbjct: 181 GRVNINLNAKPIKDNKKK-CC 200
>gi|145242842|ref|XP_001393994.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|146324048|ref|XP_747911.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|238503355|ref|XP_002382911.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|317148453|ref|XP_001822783.2| GTP-binding protein ypt1 [Aspergillus oryzae RIB40]
gi|11558649|emb|CAC17833.1| secretion related GTPase (SrgB) [Aspergillus niger]
gi|129556349|gb|EAL85873.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|134078551|emb|CAK40472.1| secretion related GTPase srgB-Aspergillus niger
gi|159126164|gb|EDP51280.1| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus A1163]
gi|220691721|gb|EED48069.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|259481104|tpe|CBF74330.1| TPA: GTP-binding protein ypt1 (Broad) [Aspergillus nidulans FGSC
A4]
gi|391874458|gb|EIT83340.1| GTPase Rab1/YPT1, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 201
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D E ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|357628401|gb|EHJ77744.1| small GTP-binding protein [Danaus plexippus]
Length = 202
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLDLDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD T +D+F+N+ W +EID Y+ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEIDRYACDS-VNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D +++ V +A + G F+E SAK NV+Q F + +I
Sbjct: 122 KCDLTTKKAVDYTTAKQYAEQLGIPFLETSAKNSTNVEQAFMTMAAEI 169
>gi|193615541|ref|XP_001951463.1| PREDICTED: ras-related protein Rab-10-like [Acyrthosiphon pisum]
Length = 200
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 125/176 (71%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + I+ ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNINEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TP 180
+GNK D + +RVV K G ARE+ F+E SAK +N+++ F +L L IL+ TP
Sbjct: 120 LGNKCDMDDKRVVGKSRGEGIAREHNISFLETSAKANINIEKAFTDLTLSILNKTP 175
>gi|121543895|gb|ABM55612.1| putative RAB1 [Maconellicoccus hirsutus]
Length = 203
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 132/204 (64%), Gaps = 7/204 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ VD+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVDLDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD T ++F NL W +E+D Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTDLESFNNLKQ-WLEEVDRYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLLAEG 186
K D+ +++VV +A + F+E SAK NV+Q F + +I + P A
Sbjct: 122 KCDEVTKKVVDYTTAKEYADQLNIPFLETSAKNATNVEQAFMTMASEIKNRVGPPSSAAV 181
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
++ K I + + E + SGCC
Sbjct: 182 TESAKVKIDQGRTIETN--KSGCC 203
>gi|221042724|dbj|BAH13039.1| unnamed protein product [Homo sapiens]
Length = 184
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 113/168 (67%), Gaps = 23/168 (13%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQER 74
K+L+IG+SGVGKSSLLL FT D F+ +LAIWDTAGQER
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDP---------------------ELAIWDTAGQER 47
Query: 75 FRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKES 134
FRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE+
Sbjct: 48 FRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKEN 106
Query: 135 ERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 107 -REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 153
>gi|358058905|dbj|GAA95303.1| hypothetical protein E5Q_01960 [Mixia osmundae IAM 14324]
Length = 218
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 122/180 (67%), Gaps = 11/180 (6%)
Query: 14 LFKLLMIGDSGVGKSSLLLSFTSDNFE---ELSPTIGVDFKVKYV------DVGGKKLKL 64
+ KLL+IG S VGKSSLL FT + F E + T+GVD KVK V K KL
Sbjct: 10 VLKLLLIGSSSVGKSSLLTRFTDEVFASDGESAATVGVDMKVKLVKRTPPGQSTAKTYKL 69
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
A+WDTAGQERFRTLTSSYYRGA G+I+VYDV R+TF NL D W +E++ + N D +++
Sbjct: 70 ALWDTAGQERFRTLTSSYYRGAHGVIVVYDVANRETFVNL-DTWFQELETFCHN-DIVRI 127
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
+VGNK DKE R+VT +EG ++ GCLF+ECSAK NV+ F+ ++ KI++ P L A
Sbjct: 128 VVGNKTDKEFARMVTAEEGQAWSDSRGCLFMECSAKQGKNVESLFDTVIDKIIENPRLYA 187
>gi|330799096|ref|XP_003287584.1| Rab GTPase [Dictyostelium purpureum]
gi|325082448|gb|EGC35930.1| Rab GTPase [Dictyostelium purpureum]
Length = 211
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 137/212 (64%), Gaps = 13/212 (6%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKL 62
+S +DYL KLL+IGDSGVGKS LLL F+ D+F TIG+DFK++ +++ GK++
Sbjct: 8 ASNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRI 67
Query: 63 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCI 122
KL IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++T+
Sbjct: 68 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHATDS-VN 125
Query: 123 KLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILD 178
K+L+GNK D ++VV G + A EYG F+E SAK +NV++ F +++ +++D
Sbjct: 126 KMLIGNKCDMAEKKVVDSARGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMID 185
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
TP+ E + K Q P + GCC
Sbjct: 186 TPN---EPPQLHSKPDLTQNP---NNKKRGCC 211
>gi|367054838|ref|XP_003657797.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL 8126]
gi|347005063|gb|AEO71461.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL 8126]
Length = 203
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 130/205 (63%), Gaps = 9/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPSLLAEGS 187
K D ++VV FA G F+E SAK NV+Q F + +I + S +A +
Sbjct: 122 KSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNN 181
Query: 188 KGLKKNIFKQKPPE--ADAAASGCC 210
N+ P +++ + GCC
Sbjct: 182 TKANVNV---SPGHGVSNSQSGGCC 203
>gi|224284454|gb|ACN39961.1| unknown [Picea sitchensis]
gi|224284508|gb|ACN39987.1| unknown [Picea sitchensis]
Length = 216
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 133/209 (63%), Gaps = 7/209 (3%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLA 65
++ ++DYL KLL+IGDSGVGKS LLL FT D+F TIG+DFK++ ++ GK++KL
Sbjct: 8 ARADYDYLVKLLLIGDSGVGKSCLLLRFTDDSFTTSFITTIGIDFKIRIFELDGKRIKLQ 67
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRT+T++YYR A GI++VYDVT +F N+ + W K I+ ++++ + K+L
Sbjct: 68 IWDTAGQERFRTITTAYYRNAMGILLVYDVTDESSFNNIRN-WIKNIEQHASD-NVNKIL 125
Query: 126 VGNKVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEEL---VLKILDTPS 181
VGNK D ES+R V+ G A EYG F E SAKT +NV+Q F + ++K L
Sbjct: 126 VGNKADMDESKRAVSTARGQELADEYGIKFFETSAKTNINVEQAFFSIAKDIMKRLSETD 185
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
N + P + ++ S CC
Sbjct: 186 FRPAPQTITINNPNTAEGPASASSKSRCC 214
>gi|225441149|ref|XP_002267366.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297739984|emb|CBI30166.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 132/206 (64%), Gaps = 7/206 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ D+F TIG+DFK++ +++ GK++KL IWD
Sbjct: 11 DYDYLVKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
K D ES+R V +G A EYG F E SAKT NV+Q F + I + +
Sbjct: 129 KADMDESKRAVPTSQGQALADEYGIKFFETSAKTNFNVEQVFFSIARDIKQRIAESDSKA 188
Query: 188 KGLKKNIFKQKPPEADAAA---SGCC 210
+ L I K P A A S CC
Sbjct: 189 EPLTIKISKPDPAIGSATAQEKSACC 214
>gi|89258407|gb|ABD65427.1| Rab1 [Suberites domuncula]
Length = 205
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++FTN+ W +EID Y++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGANGIIIVYDVTDQESFTNVK-TWLQEIDRYAST-NVSKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D +++VV FA + F+E SAK NV+Q F + +I
Sbjct: 122 KCDLTNKKVVDFTTAKEFADQLQIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|149428156|ref|XP_001511148.1| PREDICTED: ras-related protein Rab-3A, partial [Ornithorhynchus
anatinus]
Length = 223
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 17 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 76
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 77 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 134
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 135 LVGNKCDMEDERVVSSERGRQLAEHLGFEFFEASAKDNINVKQTFERLVDIICEKMSESL 194
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 195 DTADPAVTGAKQGPQLTDQQAPPHQDCA 222
>gi|354469298|ref|XP_003497066.1| PREDICTED: ras-related protein Rab-10-like [Cricetulus griseus]
Length = 200
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D + +RVV K +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMDDKRVVPKSKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|171689264|ref|XP_001909572.1| hypothetical protein [Podospora anserina S mat+]
gi|170944594|emb|CAP70705.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 131/205 (63%), Gaps = 9/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPSLLAEGS 187
K D ++VV + FA G F+E SAK NV+Q F + +I + S +A +
Sbjct: 122 KSDMADKKVVDYQVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNN 181
Query: 188 KGLKKNIFKQKPPE--ADAAASGCC 210
N+ P + ++ + GCC
Sbjct: 182 TKANVNV---SPGQGVSNNQSGGCC 203
>gi|168027125|ref|XP_001766081.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682724|gb|EDQ69140.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 143/218 (65%), Gaps = 20/218 (9%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLK 63
S ++ ++DYL KLL+IGDSGVGKS LLL F+ D+F TIG+DFK++ +++ GK++K
Sbjct: 6 SRARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIK 65
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K
Sbjct: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNK 123
Query: 124 LLVGNKVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILD 178
+LVGNK D ES+R V +G A EYG F E SAKT +NV+ F ++ ++ +
Sbjct: 124 ILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKQRLAE 183
Query: 179 TPSLLAEGSKGLKKNI------FKQKPPEADAAASGCC 210
T S E +K K ++ +QKP A+S CC
Sbjct: 184 TDS-KPEAAKNAKPDVKLLAGNSQQKP-----ASSSCC 215
>gi|432915657|ref|XP_004079196.1| PREDICTED: ras-related protein Rab-2A-like [Oryzias latipes]
Length = 212
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 134/214 (62%), Gaps = 18/214 (8%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLAE 185
D ES R V K+EG FARE+G +F+E SAKT NV++ F +E+ KI + +
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 186 GSKGLKKNIFKQKPPE---------ADAAASGCC 210
+ G+K I Q P A GCC
Sbjct: 181 EANGIK--IGPQHPTTNSTLSSSQGGHQAGGGCC 212
>gi|268567998|ref|XP_002640132.1| C. briggsae CBR-RAB-10 protein [Caenorhabditis briggsae]
Length = 201
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 132/206 (64%), Gaps = 8/206 (3%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 2 ARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID +++ +D +K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTPSLLA 184
+GNK D RVV+K G A+++G F E SAK V+V F +L IL P
Sbjct: 120 LGNKCDMSDRRVVSKDRGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAILAKMPDSTD 179
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
E S+ + Q+P + GCC
Sbjct: 180 EQSRDTINPVQPQRP----GGSGGCC 201
>gi|126323469|ref|XP_001362786.1| PREDICTED: ras-related protein Rab-3A-like [Monodelphis domestica]
Length = 220
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNEKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLAEHLGFEFFEASAKDNINVKQTFERLVDIICEKMSESL 191
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 192 DTADPAVTGAKQGPQLTDQQAPPHQDCA 219
>gi|12843097|dbj|BAB25858.1| unnamed protein product [Mus musculus]
Length = 200
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRHIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D + +RVV K +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|295658803|ref|XP_002789961.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282044|gb|EEH37610.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 201
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 126/202 (62%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICIVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D E ++ V FA G F+E SAK+ NV+Q F + +I + +K
Sbjct: 122 KSDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQIKERMGTATVNNK 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
Q +ASGCC
Sbjct: 182 --PTVQVGQGQGVQSGSASGCC 201
>gi|321478009|gb|EFX88967.1| hypothetical protein DAPPUDRAFT_304738 [Daphnia pulex]
Length = 212
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 134/215 (62%), Gaps = 20/215 (9%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF-----------EELVLKILD 178
D ES R V K+EG FARE+G +F+E SAKT NV++ F +E V I +
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAREIYEKIQEGVFDINN 180
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEADAAAS---GCC 210
+ + G + L N P A+AS CC
Sbjct: 181 EANGIKLGPQHLPSN---ANTPSGGASASQGGACC 212
>gi|355783174|gb|EHH65095.1| Ras-related protein Rab-1B [Macaca fascicularis]
Length = 201
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSY RGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYCRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTCQEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A GCC
Sbjct: 181 GERPNLKIDSTP-VKPAGGGCC 201
>gi|213514648|ref|NP_001133793.1| ras-related protein Rab-10 [Salmo salar]
gi|209150395|gb|ACI33022.1| Ras-related protein Rab-10 [Salmo salar]
gi|209155356|gb|ACI33910.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D E +RVV K +G ARE+G F E SAK +++++ F L IL TP
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANISIEKAFLTLAEDILRKTP 175
>gi|224119896|ref|XP_002331089.1| predicted protein [Populus trichocarpa]
gi|118486589|gb|ABK95133.1| unknown [Populus trichocarpa]
gi|222872817|gb|EEF09948.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 130/207 (62%), Gaps = 14/207 (6%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
E+DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ V+ GK KL IW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTSKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLL 183
NK D +VV + FA E G F+E SAK +NV+Q F E+ K+ + P+
Sbjct: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMSNQPT-- 178
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A S G + K +P E + CC
Sbjct: 179 ANNSTGTVQ--MKGQPIE---QKNNCC 200
>gi|330906915|ref|XP_003295645.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
gi|311332909|gb|EFQ96261.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 8 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 67
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 68 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 125
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++VV FA G F+E SAK+ NV+Q F + +I
Sbjct: 126 KSDMADKKVVEYTVAKEFADSLGIPFLETSAKSATNVEQAFLTMARQI 173
>gi|71895051|ref|NP_001026268.1| ras-related protein Rab-10 [Gallus gallus]
gi|82233742|sp|Q5ZIT5.1|RAB10_CHICK RecName: Full=Ras-related protein Rab-10
gi|53134733|emb|CAG32358.1| hypothetical protein RCJMB04_23k10 [Gallus gallus]
Length = 200
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 123/176 (69%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+D K+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D E +RVV K +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|17509233|ref|NP_491857.1| Protein RAB-10 [Caenorhabditis elegans]
gi|351062741|emb|CCD70773.1| Protein RAB-10 [Caenorhabditis elegans]
Length = 201
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 135/205 (65%), Gaps = 6/205 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 2 ARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID +++ +D +K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D RVV+++ G A+++G F E SAK V+V F +L IL + + +
Sbjct: 120 LGNKCDMSDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAIL---AKMPD 176
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
+ ++ P+ +++ GCC
Sbjct: 177 STDEQSRDTVNPVQPQRQSSSGGCC 201
>gi|410930247|ref|XP_003978510.1| PREDICTED: ras-related protein Rab-2A-like [Takifugu rubripes]
Length = 212
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 134/214 (62%), Gaps = 18/214 (8%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLAE 185
D ES R V K+EG FARE+G +F+E SAKT NV++ F +E+ KI + +
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 186 GSKGLKKNIFKQKPPE---------ADAAASGCC 210
+ G+K I Q P A GCC
Sbjct: 181 EANGIK--IGPQHPTTNSTLSGSQGGQHAGGGCC 212
>gi|348531422|ref|XP_003453208.1| PREDICTED: ras-related protein Rab-2A-like [Oreochromis niloticus]
Length = 212
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 134/214 (62%), Gaps = 18/214 (8%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLAE 185
D ES R V K+EG FARE+G +F+E SAKT NV++ F +E+ KI + +
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 186 GSKGLKKNIFKQKPPE---------ADAAASGCC 210
+ G+K I Q P A GCC
Sbjct: 181 EANGIK--IGPQHPTTNSTLSSNQGGHQAGGGCC 212
>gi|6679593|ref|NP_033027.1| ras-related protein Rab-3A [Mus musculus]
gi|61098195|ref|NP_037150.2| ras-related protein Rab-3A [Rattus norvegicus]
gi|178056554|ref|NP_001116651.1| ras-related protein Rab-3A [Sus scrofa]
gi|187936991|ref|NP_001120756.1| ras-related protein Rab-3A [Ovis aries]
gi|261862303|ref|NP_001159871.1| ras-related protein Rab-3A [Mus musculus]
gi|73986147|ref|XP_541942.2| PREDICTED: ras-related protein Rab-3A [Canis lupus familiaris]
gi|149757273|ref|XP_001503278.1| PREDICTED: ras-related protein Rab-3A-like [Equus caballus]
gi|301753909|ref|XP_002912772.1| PREDICTED: ras-related protein Rab-3A-like [Ailuropoda melanoleuca]
gi|344282612|ref|XP_003413067.1| PREDICTED: ras-related protein Rab-3A-like [Loxodonta africana]
gi|354473979|ref|XP_003499209.1| PREDICTED: ras-related protein Rab-3A-like [Cricetulus griseus]
gi|395847913|ref|XP_003796608.1| PREDICTED: ras-related protein Rab-3A [Otolemur garnettii]
gi|410950864|ref|XP_003982122.1| PREDICTED: ras-related protein Rab-3A [Felis catus]
gi|51702793|sp|P63012.1|RAB3A_RAT RecName: Full=Ras-related protein Rab-3A
gi|51702798|sp|P63011.1|RAB3A_MOUSE RecName: Full=Ras-related protein Rab-3A
gi|122064948|sp|Q06AU3.1|RAB3A_PIG RecName: Full=Ras-related protein Rab-3A
gi|2342528|emb|CAA51470.1| low molecular weight GTP-binding protein [Mus musculus]
gi|12837856|dbj|BAB23976.1| unnamed protein product [Mus musculus]
gi|31566349|gb|AAH53519.1| Rab3a protein [Mus musculus]
gi|56270582|gb|AAH87580.1| RAB3A, member RAS oncogene family [Rattus norvegicus]
gi|74177523|dbj|BAE34630.1| unnamed protein product [Mus musculus]
gi|74187365|dbj|BAE36661.1| unnamed protein product [Mus musculus]
gi|112292943|dbj|BAF02849.1| Rab3A [Mus musculus]
gi|115394766|gb|ABI97177.1| Rab-3A [Sus scrofa]
gi|148696919|gb|EDL28866.1| RAB3A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148696920|gb|EDL28867.1| RAB3A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149036066|gb|EDL90732.1| RAB3A, member RAS oncogene family [Rattus norvegicus]
gi|186886450|gb|ACC93601.1| Rab3A [Ovis aries]
gi|281343531|gb|EFB19115.1| hypothetical protein PANDA_000545 [Ailuropoda melanoleuca]
gi|344241347|gb|EGV97450.1| Ras-related protein Rab-3A [Cricetulus griseus]
Length = 220
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 192 DTADPAVTGAKQGPQLTDQQAPPHQDCA 219
>gi|301774282|ref|XP_002922543.1| PREDICTED: ras-related protein Rab-13-like [Ailuropoda melanoleuca]
gi|281350220|gb|EFB25804.1| hypothetical protein PANDA_011544 [Ailuropoda melanoleuca]
Length = 203
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 129/199 (64%), Gaps = 11/199 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F D+F TIG+DFK++ VDV GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D E++R V K++ + ARE+G F E SAK+ NV + F L I LL G
Sbjct: 121 NKCDMEAKRKVQKEQAVKLAREHGIRFFETSAKSSTNVDEAFSSLARDI-----LLKSGG 175
Query: 188 KGLKKNIFKQKPPEADAAA 206
+++ KPP D A
Sbjct: 176 ---RRSGNSHKPPGTDLKA 191
>gi|255631584|gb|ACU16159.1| unknown [Glycine max]
Length = 202
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 126/202 (62%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYL KLL+IGDSGV KS LLL F+ D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLLKLLLIGDSGVRKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D E+ R V+ + FA G F+E SAK NV+Q F + I D +A
Sbjct: 122 KCDLEANRAVSYEAAKAFADGIGIPFMETSAKGATNVEQAFMAMTASIKDR---MASQPA 178
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ Q + A GCC
Sbjct: 179 NNARPPTVQIRGQPVAQKGGCC 200
>gi|255570958|ref|XP_002526430.1| protein with unknown function [Ricinus communis]
gi|223534210|gb|EEF35925.1| protein with unknown function [Ricinus communis]
Length = 202
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/161 (57%), Positives = 113/161 (70%), Gaps = 3/161 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
K D +VV + FA E G F+E SAK +NV+Q F
Sbjct: 122 KCDLIENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAF 162
>gi|167387029|ref|XP_001737993.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898955|gb|EDR25679.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 199
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWD 68
E D KLL+IG+SGVGKSSLLL F+ D F + T+G+DF+VK +++ KKLKL IWD
Sbjct: 3 EKDSTIKLLLIGESGVGKSSLLLRFSEDAFNPMYITTVGIDFRVKNIELDNKKLKLQIWD 62
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+ SSYYRG GI++VYD+T R++F N+ + W + I+ + +Q+ K+LVGN
Sbjct: 63 TAGQERFRTIVSSYYRGVMGIVLVYDITSRESFNNI-EYWMRNIEA-NADQNVNKILVGN 120
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D E +RVVT EG A + G F+E SAK + V CF L ++ + E S+
Sbjct: 121 KCDAEDKRVVTSVEGQQMANKLGIPFLETSAKNSLKVDDCFISLARDVIQR---IGESSQ 177
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ I ++GCC
Sbjct: 178 SAQPGIVDPTQQTQPTESTGCC 199
>gi|24306110|gb|AAN52527.1|AF454544_2 GTP-binding protein [Ogataea angusta]
gi|24795513|gb|AAN64444.1|AF346820_1 GTP-binding protein [Ogataea angusta]
gi|320583918|gb|EFW98131.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 203
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 116/161 (72%), Gaps = 3/161 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + ++ TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N++ W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVNQ-WLQEIDRYATS-GVMKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
K D ++VV FA G F+E SA NV+Q F
Sbjct: 122 KCDLTDKKVVDYAVAKEFADSRGIKFLETSASQSTNVEQAF 162
>gi|110350677|ref|NP_776871.2| ras-related protein Rab-3A [Bos taurus]
gi|116242742|sp|P11023.3|RAB3A_BOVIN RecName: Full=Ras-related protein Rab-3A; AltName: Full=SMG P25A
gi|109658293|gb|AAI18279.1| RAB3A, member RAS oncogene family [Bos taurus]
gi|296486045|tpg|DAA28158.1| TPA: ras-related protein Rab-3A [Bos taurus]
Length = 220
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 192 DTADPAVTGAKQGPQLTDQQAPPHQDCA 219
>gi|55729263|emb|CAH91367.1| hypothetical protein [Pongo abelii]
Length = 200
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKETYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D + +RVV K +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|358396151|gb|EHK45538.1| secretion-related small GTPase SRG2/YPT1 [Trichoderma atroviride
IMI 206040]
Length = 202
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 127/202 (62%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV FA G F+E SAK NV+Q F + +I + +
Sbjct: 122 KSDMSDKKVVEYSVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNT 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
++ Q ++++S CC
Sbjct: 182 KPSVHV-GQGQGVGNSSSSSCC 202
>gi|209877729|ref|XP_002140306.1| Ras family protein Rab-1A [Cryptosporidium muris RN66]
gi|209555912|gb|EEA05957.1| Ras family protein Rab-1A, putative [Cryptosporidium muris RN66]
Length = 211
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 126/191 (65%), Gaps = 4/191 (2%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S Q+E+DYLFKL++IGDSGVGKS LLL F D+F + TIGVDF+ + V + K +K
Sbjct: 3 SMHQKEYDYLFKLVLIGDSGVGKSCLLLRFADDSFTDSYITTIGVDFRFRTVKIDDKIIK 62
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TS+YYRGA G+++VYD T + +F ++ D W E+D Y+T D K
Sbjct: 63 LQIWDTAGQERFRTITSAYYRGADGVVLVYDTTLQSSFDHIDD-WISEVDRYTT--DSSK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+LVGNK D ++R + + +G + E G FIE SAK NV+ CF + ++L+ S
Sbjct: 120 ILVGNKCDLVAQRAIEQSQGEKKSSELGIDFIEASAKNSTNVEDCFIRIAKRLLEKKSQS 179
Query: 184 AEGSKGLKKNI 194
+ +NI
Sbjct: 180 GAVPRIAHQNI 190
>gi|440896449|gb|ELR48367.1| Ras-related protein Rab-3A, partial [Bos grunniens mutus]
Length = 221
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 15 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 74
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 75 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 132
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 133 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 192
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 193 DTADPAVTGAKQGPQLTDQQAPPHQDCA 220
>gi|440291312|gb|ELP84581.1| hypothetical protein EIN_171560 [Entamoeba invadens IP1]
Length = 207
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/195 (50%), Positives = 124/195 (63%), Gaps = 10/195 (5%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK+K V + G +KL IWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQINGLNVKLQIWDTA 65
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGAQGII+VY V TF N+ W +EI+ Y++ + IKLL+GNK
Sbjct: 66 GQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQ-WLQEIERYAS-ESVIKLLIGNKC 123
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL------DTPSLLA 184
D E ER VT ++G A F+E SAK +NV + F ++ I+ +TPS
Sbjct: 124 DLEDERAVTVEQGQELANSLNVSFMESSAKKALNVDELFNKIATDIMKNLQTSNTPS-KT 182
Query: 185 EGSKGLKKNIFKQKP 199
+ L K K KP
Sbjct: 183 DDKANLSKGNGKAKP 197
>gi|164423490|ref|XP_963146.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|466171|sp|P33723.1|YPT1_NEUCR RecName: Full=GTP-binding protein ypt1
gi|262046|gb|AAB24564.1| NCYPT1 [Neurospora crassa]
gi|7981351|emb|CAB92031.1| GTP-binding protein ypt1 [Neurospora crassa]
gi|157070115|gb|EAA33910.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|336468090|gb|EGO56253.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2508]
gi|350289669|gb|EGZ70894.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2509]
gi|380095744|emb|CCC05790.1| putative GTP-binding protein ypt1 [Sordaria macrospora k-hell]
gi|384298|prf||1905382A small GTP-binding protein
Length = 203
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 130/205 (63%), Gaps = 9/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPSLLAEGS 187
K D ++VV FA G F+E SAK NV+Q F + +I + S +A +
Sbjct: 122 KSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNN 181
Query: 188 KGLKKNIFKQKPPE--ADAAASGCC 210
N+ P ++ ++ GCC
Sbjct: 182 TKASVNV---SPGHGVSNNSSGGCC 203
>gi|261190448|ref|XP_002621633.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis SLH14081]
gi|239591056|gb|EEQ73637.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis SLH14081]
gi|239614972|gb|EEQ91959.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis ER-3]
Length = 221
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 116/169 (68%), Gaps = 3/169 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
Q +DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IW
Sbjct: 23 QGYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIW 82
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVG
Sbjct: 83 DTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVG 140
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
NK D E ++ V FA G F+E SAK+ NV+Q F + +I
Sbjct: 141 NKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 189
>gi|146422886|ref|XP_001487377.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
gi|146388498|gb|EDK36656.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
Length = 207
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 129/208 (62%), Gaps = 7/208 (3%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAI 66
E+D+LFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ GK +KL I
Sbjct: 2 NNEYDFLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI----LDTPSL 182
GNK D +++V FA F+E SA + NV+Q F + +I + S
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMTNNASS 179
Query: 183 LAEGSKGLKKNIFKQKPPEADAAASGCC 210
A G+ K N+ + ++ CC
Sbjct: 180 GAGGANASKSNVNLRGQSLTSNQSNSCC 207
>gi|399163153|gb|AFP33152.1| rab-10, partial [Caenorhabditis elegans]
Length = 200
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 135/205 (65%), Gaps = 6/205 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 1 ARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 60
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID +++ +D +K++
Sbjct: 61 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKMI 118
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D RVV+++ G A+++G F E SAK V+V F +L IL + + +
Sbjct: 119 LGNKCDMSDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAIL---AKMPD 175
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
+ ++ P+ +++ GCC
Sbjct: 176 STDEQSRDTVNPVQPQRQSSSGGCC 200
>gi|417408831|gb|JAA50951.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 22 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 81
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 82 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 139
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 140 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 199
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 200 DTADPAVTGAKQGPQLTDQQAPPHQDCA 227
>gi|401407236|ref|XP_003883067.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
gi|325117483|emb|CBZ53035.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
Length = 217
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 137/216 (63%), Gaps = 10/216 (4%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKK 61
++ +++D+LFKL++IGDSGVGKS LLL F+ D F E TIGVDF+ + ++V +
Sbjct: 2 AAGGRPRDYDHLFKLVLIGDSGVGKSCLLLRFSDDAFTESYITTIGVDFRFRTINVDNEI 61
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
+KL IWDTAGQERFRT+TS+YYRGA GI++VYDVT RD+F ++ D W E++ Y+ C
Sbjct: 62 VKLQIWDTAGQERFRTITSAYYRGADGIVLVYDVTDRDSFGHV-DEWLAEVNRYANENTC 120
Query: 122 IKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEEL---VLKILD 178
K+LVGNK +K +R V+ +EG A E G FIE SAK +NV + F + ++K+
Sbjct: 121 -KILVGNKCEKADDRQVSAEEGQRKAEELGISFIETSAKNAINVDEAFTVVARELIKMKQ 179
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEAD----AAASGCC 210
+ S S G + +P A+ A SG C
Sbjct: 180 SASAAGGRSAGPQGMRIASQPTGAENRAMAQRSGNC 215
>gi|198418247|ref|XP_002129883.1| PREDICTED: similar to Ras-related protein Rab-10 [Ciona
intestinalis]
Length = 202
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 134/205 (65%), Gaps = 8/205 (3%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + I+ +++ +D K+L
Sbjct: 62 IWDTAGQERFHTITTSYYRGANGIMLVYDITNTKSFENISK-WLRNIEEHAS-EDVEKML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D E +R+++K+ G A+E+G F E SAK +N++ F L IL +
Sbjct: 120 LGNKCDMEDKRMISKERGEMIAKEHGIKFYETSAKNNINIETAFIALATDILHKTPVKET 179
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
G+ ++ +Q+ ++ CC
Sbjct: 180 GAGSAGVDVTQQRQ-----SSRSCC 199
>gi|2245111|emb|CAB10533.1| GTP-binding RAB1C like protein [Arabidopsis thaliana]
Length = 221
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/201 (50%), Positives = 128/201 (63%), Gaps = 8/201 (3%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWDTA
Sbjct: 25 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 84
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+ YDVT ++F N+ W EID Y++ ++ KLLVGNK
Sbjct: 85 GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNKC 142
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-LDTPSLLAEGSKG 189
D S++VV+ + FA E G F+E SAK NV++ F + I S A GSK
Sbjct: 143 DLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSKP 202
Query: 190 LKKNIFKQKPPEADAAASGCC 210
I Q + SGCC
Sbjct: 203 PTVQIRGQPVNQ----QSGCC 219
>gi|453087322|gb|EMF15363.1| GTP-binding protein ypt1 [Mycosphaerella populorum SO2202]
Length = 201
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 125/202 (61%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV FA G F+E SAK NV+Q F + +I + +K
Sbjct: 122 KSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGNTTVNNK 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ Q +A GCC
Sbjct: 182 PTVQ--VGQGSNVQSGSAGGCC 201
>gi|452845509|gb|EME47442.1| hypothetical protein DOTSEDRAFT_69383 [Dothistroma septosporum
NZE10]
Length = 201
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 125/202 (61%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV FA G F+E SAK NV+Q F + +I + +K
Sbjct: 122 KSDMSDKKVVEYAVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGNTTVNNK 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ Q +A GCC
Sbjct: 182 PTVQ--VGQGSNVQSGSAGGCC 201
>gi|11558500|emb|CAC17744.1| small GTP-binding protein YPTI [Trichoderma reesei]
gi|340515573|gb|EGR45826.1| ras GTPase [Trichoderma reesei QM6a]
gi|358389124|gb|EHK26717.1| secretion-related small GTPase YPT1 [Trichoderma virens Gv29-8]
Length = 202
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 127/202 (62%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV FA G F+E SAK NV+Q F + +I + +
Sbjct: 122 KSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNT 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
++ Q ++++S CC
Sbjct: 182 KPSVHV-GQGQGVGNSSSSSCC 202
>gi|350538375|ref|NP_001233828.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053065|gb|AAA80679.1| small GTP-binding protein [Solanum lycopersicum]
Length = 202
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/161 (57%), Positives = 113/161 (70%), Gaps = 3/161 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ N+ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYA-NESVCKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
K D +VV + G A E G F+E SAK +NV+Q F
Sbjct: 122 KCDLVENKVVDTQMGKALADELGIPFLETSAKDSINVEQAF 162
>gi|169605185|ref|XP_001796013.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|189195446|ref|XP_001934061.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|396477831|ref|XP_003840376.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|111065556|gb|EAT86676.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|187979940|gb|EDU46566.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|312216948|emb|CBX96897.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|451995033|gb|EMD87502.1| hypothetical protein COCHEDRAFT_1023585 [Cochliobolus
heterostrophus C5]
Length = 201
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++VV FA G F+E SAK+ NV+Q F + +I
Sbjct: 122 KSDMADKKVVEYTVAKEFADSLGIPFLETSAKSATNVEQAFLTMARQI 169
>gi|225439876|ref|XP_002278842.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297741550|emb|CBI32682.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 134/209 (64%), Gaps = 13/209 (6%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
K D ES+R V +G A EYG F E SAKT +NV++ F + D LAE
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIG---RDIKQRLAETD 185
Query: 188 KGLKKNIFKQKPPEADA------AASGCC 210
+ + + PP+ A A S CC
Sbjct: 186 SKAEPHTIRINPPDHAAGSAETPAKSACC 214
>gi|348511151|ref|XP_003443108.1| PREDICTED: ras-related protein Rab-3D-like [Oreochromis niloticus]
Length = 222
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 130/206 (63%), Gaps = 3/206 (1%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A+ Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K++KL
Sbjct: 17 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRIKL 76
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G +++YD+T +D+F + D WA +I YS + + +
Sbjct: 77 QIWDTAGQERYRTITTAYYRGAMGFLLMYDITNQDSFNAVQD-WATQIKTYSWDNAQV-I 134
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
LVGNK D E +R++ ++G A E G F E SAK +NV+Q FE LV I + +
Sbjct: 135 LVGNKCDLEDDRLIPTEDGQRLAEELGFQFFEASAKDNINVKQVFERLVDVICEKMNESM 194
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
EG L N Q ++ + + G C
Sbjct: 195 EGDANLIANHSNQGLKDSPSESHGGC 220
>gi|302413135|ref|XP_003004400.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|261356976|gb|EEY19404.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|346972547|gb|EGY15999.1| GTP-binding protein ypt1 [Verticillium dahliae VdLs.17]
Length = 202
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 131/205 (63%), Gaps = 10/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV FA G F+E SAK NV+Q F + +I + ++
Sbjct: 122 KSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNE 181
Query: 189 GLKKNIFKQKPPEADAAAS---GCC 210
K+++ Q P + ++S GCC
Sbjct: 182 --KRSV--QVGPGQNVSSSPSGGCC 202
>gi|7710086|ref|NP_057885.1| ras-related protein Rab-10 [Mus musculus]
gi|61889071|ref|NP_059055.2| ras-related protein Rab-10 [Rattus norvegicus]
gi|155372291|ref|NP_001094758.1| ras-related protein Rab-10 [Bos taurus]
gi|197099764|ref|NP_001126682.1| ras-related protein Rab-10 [Pongo abelii]
gi|256222019|ref|NP_057215.3| ras-related protein Rab-10 [Homo sapiens]
gi|311771751|ref|NP_001003277.2| ras-related protein Rab-10 [Canis lupus familiaris]
gi|340007402|ref|NP_001229989.1| RAB10, member RAS oncogene family [Sus scrofa]
gi|114576514|ref|XP_525714.2| PREDICTED: ras-related protein Rab-10 isoform 4 [Pan troglodytes]
gi|149727712|ref|XP_001502863.1| PREDICTED: ras-related protein Rab-10-like [Equus caballus]
gi|291387085|ref|XP_002710022.1| PREDICTED: RAB10, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|296224339|ref|XP_002758008.1| PREDICTED: ras-related protein Rab-10-like [Callithrix jacchus]
gi|301756020|ref|XP_002913834.1| PREDICTED: ras-related protein Rab-10-like [Ailuropoda melanoleuca]
gi|332242957|ref|XP_003270648.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Nomascus
leucogenys]
gi|344280395|ref|XP_003411969.1| PREDICTED: ras-related protein Rab-10-like [Loxodonta africana]
gi|395828684|ref|XP_003787497.1| PREDICTED: ras-related protein Rab-10 [Otolemur garnettii]
gi|397513606|ref|XP_003827102.1| PREDICTED: ras-related protein Rab-10-like [Pan paniscus]
gi|403288243|ref|XP_003935319.1| PREDICTED: ras-related protein Rab-10-like [Saimiri boliviensis
boliviensis]
gi|410955664|ref|XP_003984471.1| PREDICTED: ras-related protein Rab-10 [Felis catus]
gi|426334961|ref|XP_004029003.1| PREDICTED: ras-related protein Rab-10-like [Gorilla gorilla
gorilla]
gi|46577638|sp|P61026.1|RAB10_HUMAN RecName: Full=Ras-related protein Rab-10
gi|46577639|sp|P61027.1|RAB10_MOUSE RecName: Full=Ras-related protein Rab-10
gi|75070495|sp|Q5R5U1.1|RAB10_PONAB RecName: Full=Ras-related protein Rab-10
gi|10121882|gb|AAG13413.1|AF297660_1 RAB10 [Homo sapiens]
gi|20379066|gb|AAM21093.1|AF498945_1 small GTP binding protein RAB10 [Homo sapiens]
gi|33150538|gb|AAP97147.1|AF086917_1 rab10 [Homo sapiens]
gi|3406428|gb|AAC29313.1| Rab10 [Mus musculus]
gi|5410328|gb|AAD43034.1| ras-related GTP-binding protein [Homo sapiens]
gi|10435058|dbj|BAB14474.1| unnamed protein product [Homo sapiens]
gi|12654157|gb|AAH00896.1| RAB10, member RAS oncogene family [Homo sapiens]
gi|26352864|dbj|BAC40062.1| unnamed protein product [Mus musculus]
gi|26390320|dbj|BAC25878.1| unnamed protein product [Mus musculus]
gi|33989422|gb|AAH56374.1| RAB10, member RAS oncogene family [Mus musculus]
gi|48146723|emb|CAG33584.1| RAB10 [Homo sapiens]
gi|55715653|gb|AAH85744.1| RAB10, member RAS oncogene family [Rattus norvegicus]
gi|55732345|emb|CAH92875.1| hypothetical protein [Pongo abelii]
gi|71060115|emb|CAJ18601.1| Rab10 [Mus musculus]
gi|74142264|dbj|BAE31896.1| unnamed protein product [Mus musculus]
gi|74144564|dbj|BAE36116.1| unnamed protein product [Mus musculus]
gi|74149126|dbj|BAE22371.1| unnamed protein product [Mus musculus]
gi|74195726|dbj|BAE30429.1| unnamed protein product [Mus musculus]
gi|74196963|dbj|BAE35038.1| unnamed protein product [Mus musculus]
gi|74204709|dbj|BAE35423.1| unnamed protein product [Mus musculus]
gi|74212200|dbj|BAE40259.1| unnamed protein product [Mus musculus]
gi|74213449|dbj|BAE35538.1| unnamed protein product [Mus musculus]
gi|74214105|dbj|BAE29464.1| unnamed protein product [Mus musculus]
gi|74219481|dbj|BAE29515.1| unnamed protein product [Mus musculus]
gi|74226932|dbj|BAE27109.1| unnamed protein product [Mus musculus]
gi|112292977|dbj|BAF02866.1| Rab10 [Mus musculus]
gi|119621115|gb|EAX00710.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119621116|gb|EAX00711.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148669455|gb|EDL01402.1| RAB10, member RAS oncogene family [Mus musculus]
gi|149050831|gb|EDM03004.1| RAB10, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|151556300|gb|AAI48074.1| RAB10 protein [Bos taurus]
gi|261861502|dbj|BAI47273.1| RAB10, member RAS oncogene family [synthetic construct]
gi|281344975|gb|EFB20559.1| hypothetical protein PANDA_001688 [Ailuropoda melanoleuca]
gi|296482330|tpg|DAA24445.1| TPA: ras-related GTP-binding protein RAB10 [Bos taurus]
gi|312151766|gb|ADQ32395.1| RAB10, member RAS oncogene family [synthetic construct]
gi|351715996|gb|EHB18915.1| Ras-related protein Rab-10 [Heterocephalus glaber]
gi|355565524|gb|EHH21953.1| hypothetical protein EGK_05128 [Macaca mulatta]
gi|355751171|gb|EHH55426.1| hypothetical protein EGM_04635 [Macaca fascicularis]
gi|380783957|gb|AFE63854.1| ras-related protein Rab-10 [Macaca mulatta]
gi|383409653|gb|AFH28040.1| ras-related protein Rab-10 [Macaca mulatta]
gi|384942192|gb|AFI34701.1| ras-related protein Rab-10 [Macaca mulatta]
gi|410267930|gb|JAA21931.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|410350797|gb|JAA42002.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|432096825|gb|ELK27403.1| Ras-related protein Rab-10 [Myotis davidii]
gi|440906101|gb|ELR56406.1| Ras-related protein Rab-10 [Bos grunniens mutus]
Length = 200
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D + +RVV K +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|389584195|dbj|GAB66928.1| small GTPase Rab1 [Plasmodium cynomolgi strain B]
Length = 205
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 131/200 (65%), Gaps = 3/200 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
+++DYL+K+++IGDSGVGKS +LL F+ D+F E TIGVDF+ + + VG K +KL IW
Sbjct: 7 RDYDYLYKIILIGDSGVGKSCILLRFSDDHFTESYITTIGVDFRFRRIKVGDKMVKLQIW 66
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TS+YYRGA GII++YD T R++F ++ + W EI+ Y+T + C KLLVG
Sbjct: 67 DTAGQERFRTITSAYYRGADGIIIIYDTTDRNSFLHIKE-WINEINKYTTEETC-KLLVG 124
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D + E V+ EG N A+E FIE SAK NV+ F + +++ + S
Sbjct: 125 NKSDCKDEMEVSTTEGENKAKELNISFIETSAKDATNVELAFTMITEELIKKKKKKSLSS 184
Query: 188 KGLKKNIFKQKPPEADAAAS 207
G ++ K P + A S
Sbjct: 185 LGATQSKVKLSPEDHGPAHS 204
>gi|116199373|ref|XP_001225498.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
gi|88179121|gb|EAQ86589.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
Length = 203
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|391330041|ref|XP_003739473.1| PREDICTED: ras-related protein Rab-3-like [Metaseiulus
occidentalis]
Length = 218
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 127/200 (63%), Gaps = 11/200 (5%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGG 59
M +++ Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK V
Sbjct: 4 MPKDASTDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHD 63
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
K++KL IWDTAGQER+RT+T++YYRGA G I++YDVT D+F + D W +I YS +
Sbjct: 64 KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFKCVQD-WVTQIKTYSWDN 122
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT 179
+ +LVGNK D E ERVV+ G A + G F E SAK +NV+QCFE LV I D
Sbjct: 123 AQV-VLVGNKCDMEDERVVSTDRGRQLAEQLGLEFFETSAKENINVKQCFERLVDIICDK 181
Query: 180 --------PSLLAEGSKGLK 191
PSL++ +KG +
Sbjct: 182 MSETLDADPSLVSGANKGTR 201
>gi|255076991|ref|XP_002502151.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226517416|gb|ACO63409.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 202
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 129/206 (62%), Gaps = 7/206 (3%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A Q++D+L KLL+IGDSGVGKS LLL F+ D F TIG+DFK++ V++ GK++KL
Sbjct: 3 AGSQQYDHLIKLLLIGDSGVGKSCLLLRFSEDQFTSSFITTIGIDFKIRTVELDGKRVKL 62
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQERFRT+T++YYRGA GI++ YDVT +F N+ + W + I+ ++++ K+
Sbjct: 63 QIWDTAGQERFRTITNAYYRGAHGILLTYDVTDEGSFNNVRN-WMRNIEQHASD-GVSKV 120
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
LVGNK D E +RV++ ++G A+E+G F E SAK NV F + + L
Sbjct: 121 LVGNKSDAEEKRVISTEQGEALAKEFGIPFFETSAKANTNVNDAF--FAIARIIKAGLKT 178
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
G G K PP + + CC
Sbjct: 179 SGDGGGAG--VKLGPPPKAKSGTSCC 202
>gi|12052826|emb|CAB66585.1| hypothetical protein [Homo sapiens]
gi|190689585|gb|ACE86567.1| RAB10, member RAS oncogene family protein [synthetic construct]
gi|190690949|gb|ACE87249.1| RAB10, member RAS oncogene family protein [synthetic construct]
Length = 200
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D + +RVV K +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|403302550|ref|XP_003941919.1| PREDICTED: ras-related protein Rab-13 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 128/196 (65%), Gaps = 11/196 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D E++R V K++ ARE+G F E SAK+ +NV + F L IL L + G
Sbjct: 121 NKCDMEAKRKVQKEQANKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL----LKSGGR 176
Query: 188 KGLKKNIFKQKPPEAD 203
+ N KPP D
Sbjct: 177 RSGNGN----KPPSTD 188
>gi|400599215|gb|EJP66919.1| small GTP-binding protein YPTI [Beauveria bassiana ARSEF 2860]
Length = 202
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|388499182|gb|AFK37657.1| unknown [Lotus japonicus]
Length = 203
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 125/202 (61%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKL +IGDSGVGKS LLL F D++ E TIGVDFK++ V+ K +KL IWD
Sbjct: 4 EYDYLFKLFLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVG+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGS 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + R V+ FA + G F+E SAK NV+Q F + I + + +
Sbjct: 122 KCDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEQAFMAMSASIKNRMASQPSANN 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + + P SGCC
Sbjct: 182 GRPPTVQIRGQPVGQ--KSGCC 201
>gi|341885115|gb|EGT41050.1| hypothetical protein CAEBREN_19821 [Caenorhabditis brenneri]
gi|341885137|gb|EGT41072.1| hypothetical protein CAEBREN_20077 [Caenorhabditis brenneri]
Length = 201
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 134/205 (65%), Gaps = 6/205 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 2 ARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID +++ +D +K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D RVV+++ G A+++G F E SAK V+V F +L IL + + +
Sbjct: 120 LGNKCDMSDRRVVSRERGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAIL---AKMPD 176
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
++ ++ P+ + GCC
Sbjct: 177 STEEQSRDTVNPVQPQRTGGSGGCC 201
>gi|410730291|ref|XP_003671325.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
gi|401780143|emb|CCD26082.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
Length = 210
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 132/200 (66%), Gaps = 17/200 (8%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IG+SGVGKS LLL F+ D + + TIGVDFK+K V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRG+ GII+VYDVT +D+F + +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFDGVK-MWLQEIDRYATST-VLKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D E +RVV FA F+E SA NV++ F + +I
Sbjct: 122 KCDLEDKRVVEYDVAKEFADSNKMPFLETSALNSTNVEEAFLTMARQI------------ 169
Query: 189 GLKKNIFKQKPPEADAAASG 208
K+++ +QK +++AA+ G
Sbjct: 170 --KESMNQQKMEDSNAASKG 187
>gi|240849281|ref|NP_001155333.1| ras-related protein Rab-10 [Ovis aries]
gi|238566728|gb|ACR46624.1| RAB10 [Ovis aries]
Length = 200
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D + +RVV K +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|258571511|ref|XP_002544559.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
gi|237904829|gb|EEP79230.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
Length = 1102
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 116/172 (67%), Gaps = 3/172 (1%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A+ +DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL
Sbjct: 901 ANNFRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKL 960
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KL
Sbjct: 961 QIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKL 1018
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
LVGNK D E ++ V FA G F+E SAK NV+Q F + +I
Sbjct: 1019 LVGNKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 1070
>gi|344304693|gb|EGW34925.1| hypothetical protein SPAPADRAFT_133146 [Spathaspora passalidarum
NRRL Y-27907]
Length = 207
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 131/209 (62%), Gaps = 9/209 (4%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAI 66
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-----LDTPS 181
GNK D +++V FA F+E SA + NV+Q F + +I +T S
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMTSNTNS 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
A +KG K N+ + ++ CC
Sbjct: 180 GNAGNAKG-KSNVNLRGESLTSNQSNSCC 207
>gi|131804|sp|P24409.1|RAB10_CANFA RecName: Full=Ras-related protein Rab-10
gi|915|emb|CAA39798.1| rab10 [Canis lupus familiaris]
Length = 200
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D + +RVV K +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTP 175
>gi|74142282|dbj|BAE31904.1| unnamed protein product [Mus musculus]
gi|74178135|dbj|BAE29855.1| unnamed protein product [Mus musculus]
Length = 200
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDMERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D + +RVV K +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|395860030|ref|XP_003802320.1| PREDICTED: ras-related protein Rab-13 [Otolemur garnettii]
Length = 201
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 129/196 (65%), Gaps = 11/196 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ V++ GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVNIEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I +++ +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIKEHAS-AGVERLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D E++R V K++ A+E+G F E SAK+ VNV + F L I LL GS
Sbjct: 121 NKCDMEAKRRVQKEQADKLAQEHGIRFFETSAKSSVNVAEAFSSLARDI-----LLKSGS 175
Query: 188 KGLKKNIFKQKPPEAD 203
+ + KPP D
Sbjct: 176 RRRGND---NKPPSTD 188
>gi|61365868|gb|AAX42776.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 128/196 (65%), Gaps = 11/196 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D E++R V K++ ARE+G F E SAK+ +NV + F L IL L + G
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL----LKSGGQ 176
Query: 188 KGLKKNIFKQKPPEAD 203
+ N KPP D
Sbjct: 177 RSGNGN----KPPSTD 188
>gi|4506363|ref|NP_002861.1| ras-related protein Rab-13 isoform 1 [Homo sapiens]
gi|386782037|ref|NP_001248220.1| ras-related protein Rab-13 [Macaca mulatta]
gi|297663399|ref|XP_002810164.1| PREDICTED: ras-related protein Rab-13 [Pongo abelii]
gi|332220479|ref|XP_003259383.1| PREDICTED: ras-related protein Rab-13 [Nomascus leucogenys]
gi|332810355|ref|XP_522433.3| PREDICTED: ras-related protein Rab-13 [Pan troglodytes]
gi|397492531|ref|XP_003817175.1| PREDICTED: ras-related protein Rab-13 [Pan paniscus]
gi|402856334|ref|XP_003892746.1| PREDICTED: ras-related protein Rab-13 [Papio anubis]
gi|426331749|ref|XP_004026857.1| PREDICTED: ras-related protein Rab-13 [Gorilla gorilla gorilla]
gi|1710016|sp|P51153.1|RAB13_HUMAN RecName: Full=Ras-related protein Rab-13; AltName: Full=Cell
growth-inhibiting gene 4 protein; Flags: Precursor
gi|20379072|gb|AAM21096.1|AF498948_1 small GTP binding protein RAB13 [Homo sapiens]
gi|452320|emb|CAA53266.1| rab 13 [Homo sapiens]
gi|12654003|gb|AAH00799.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|41350395|gb|AAS00485.1| growth-inhibiting gene 4 protein [Homo sapiens]
gi|54696268|gb|AAV38506.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|54696270|gb|AAV38507.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|61356004|gb|AAX41198.1| RAB13 member RAS oncogene family [synthetic construct]
gi|61356015|gb|AAX41199.1| RAB13 member RAS oncogene family [synthetic construct]
gi|68085671|gb|AAH73168.2| RAB13, member RAS oncogene family [Homo sapiens]
gi|117645128|emb|CAL38030.1| hypothetical protein [synthetic construct]
gi|117645354|emb|CAL38143.1| hypothetical protein [synthetic construct]
gi|117645750|emb|CAL38342.1| hypothetical protein [synthetic construct]
gi|117646294|emb|CAL38614.1| hypothetical protein [synthetic construct]
gi|117646436|emb|CAL38685.1| hypothetical protein [synthetic construct]
gi|117646828|emb|CAL37529.1| hypothetical protein [synthetic construct]
gi|119573633|gb|EAW53248.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573634|gb|EAW53249.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573635|gb|EAW53250.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|158256592|dbj|BAF84269.1| unnamed protein product [Homo sapiens]
gi|208967230|dbj|BAG73629.1| RAB13, member RAS oncogene family [synthetic construct]
gi|355558499|gb|EHH15279.1| hypothetical protein EGK_01346 [Macaca mulatta]
gi|380785379|gb|AFE64565.1| ras-related protein Rab-13 [Macaca mulatta]
gi|384942334|gb|AFI34772.1| ras-related protein Rab-13 [Macaca mulatta]
gi|740475|prf||2005309B rab13 GTPase
Length = 203
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 128/196 (65%), Gaps = 11/196 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D E++R V K++ ARE+G F E SAK+ +NV + F L IL L + G
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL----LKSGGR 176
Query: 188 KGLKKNIFKQKPPEAD 203
+ N KPP D
Sbjct: 177 RSGNGN----KPPSTD 188
>gi|367035328|ref|XP_003666946.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
gi|347014219|gb|AEO61701.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
Length = 203
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|442755463|gb|JAA69891.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 253
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 117/173 (67%), Gaps = 3/173 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+ YDVT +++F N+ W +EID Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
LLVGNK D +++VV FA F+E SAK NV+Q F + +I
Sbjct: 120 LLVGNKSDLTTKKVVDYTTAKEFADHLNIPFLETSAKNATNVEQAFMTMAAEI 172
>gi|164658714|ref|XP_001730482.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
gi|159104378|gb|EDP43268.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
Length = 212
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 131/208 (62%), Gaps = 9/208 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 66
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT TF N+ W +EI+ Y+ + KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDESTFANVKQ-WLQEIERYAC-EGVNKLLVGN 124
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLLAEG 186
K D + + V + A E G F++ SAK NV+Q F + +I D S + G
Sbjct: 125 KADLTNSKAVDFESAKQLADELGIAFLDTSAKDATNVEQAFLTMAKQIKDRMGVSAMQNG 184
Query: 187 SK-GLKKNIFK---QKPPEADAAASGCC 210
S G K+ K + +A + + GCC
Sbjct: 185 SAGGAGKSTLKVGQGQNVQASSNSGGCC 212
>gi|60826641|gb|AAX36766.1| RAB13 member RAS oncogene family [synthetic construct]
gi|60826676|gb|AAX36767.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 128/196 (65%), Gaps = 11/196 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D E++R V K++ ARE+G F E SAK+ +NV + F L IL L + G
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL----LKSGGR 176
Query: 188 KGLKKNIFKQKPPEAD 203
+ N KPP D
Sbjct: 177 RSGNGN----KPPSTD 188
>gi|18447917|dbj|BAB84324.1| ras-related protein RAB8-3 [Nicotiana tabacum]
Length = 216
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 136/209 (65%), Gaps = 13/209 (6%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG- 186
K D ES+R V +G A EYG F E SAKT +NV++ F + D LAE
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIA---RDIKQRLAESD 185
Query: 187 SKGLKKNIFKQKPPEADAAA-----SGCC 210
SK + I +P +A A+ S CC
Sbjct: 186 SKAEPQTIRINQPDQAAGASQSVQKSACC 214
>gi|406867933|gb|EKD20970.1| putative GTP-binding protein ypt1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 321
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDT
Sbjct: 125 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 184
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGNK
Sbjct: 185 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 242
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
D ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 243 SDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 289
>gi|367011395|ref|XP_003680198.1| hypothetical protein TDEL_0C00980 [Torulaspora delbrueckii]
gi|359747857|emb|CCE90987.1| hypothetical protein TDEL_0C00980 [Torulaspora delbrueckii]
Length = 215
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 134/214 (62%), Gaps = 9/214 (4%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGG 59
+ +SS + + +D + K+L+IGDSGVGKS LL+ F D F TIG+DFK+K VD+ G
Sbjct: 7 VSASSGTGKSYDSIMKILLIGDSGVGKSCLLVRFVDDKFNPSFITTIGIDFKIKTVDING 66
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
KK KL +WDTAGQERFRT+T++YYRGA GII+VYDVT TFTN+ W K ++ ++ N
Sbjct: 67 KKTKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIRQ-WFKTVNEHA-ND 124
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF---EELVLKI 176
D LLVGNK D ++ R VT ++G A+E G F+E SAK NV + F L+ +
Sbjct: 125 DAQLLLVGNKSDMDT-RTVTYEQGETLAKELGIPFVESSAKNDDNVNEIFFTLARLIQEK 183
Query: 177 LDTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
+D L + G + NI + + SGCC
Sbjct: 184 IDNDKLAGGANSGREGNI--NINSGSGSTKSGCC 215
>gi|348558673|ref|XP_003465141.1| PREDICTED: ras-related protein Rab-3A [Cavia porcellus]
Length = 220
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 192 DTADPAVTGAKQGPQLSEQQAPPHQDCA 219
>gi|225452278|ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis vinifera]
gi|296087576|emb|CBI34832.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 131/208 (62%), Gaps = 10/208 (4%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + V + G+ +KL IWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRR+TF +L+ W ++ ++ N + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMTIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL----LAE 185
D R V+K+EG FA+E G LF+E SA+T NV++ F + +IL L+
Sbjct: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAARILQNIQEGVFDLSN 180
Query: 186 GSKGLKKNIFKQKPPEADAAAS---GCC 210
S G+K + + P D S GCC
Sbjct: 181 ESSGIKVGYGRPQGPSGDGTVSQRGGCC 208
>gi|67470746|ref|XP_651336.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537429|dbj|BAB40669.1| small GTPase Rab1A [Entamoeba histolytica]
gi|56468058|gb|EAL45948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449708204|gb|EMD47708.1| small GTPase Rab1A, putative [Entamoeba histolytica KU27]
Length = 205
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 116/170 (68%), Gaps = 3/170 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+E DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK+K V + GK +KL IW
Sbjct: 3 EEKDYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNVKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGAQGII+VY V TF N+ W +EI+ Y++ + IKLL+G
Sbjct: 63 DTAGQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQ-WLQEIERYAS-ETVIKLLIG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
NK D + ER VT ++G A F+E SAK +NV + F + I+
Sbjct: 121 NKCDLDDERAVTVEQGQELANSLNVSFMEASAKKSLNVDELFIRIATDIM 170
>gi|398390616|ref|XP_003848768.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339468644|gb|EGP83744.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 201
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 125/202 (61%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV FA G F+E SAK NV+Q F + +I + +K
Sbjct: 122 KSDMADKKVVEYTVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQIKERMGNTTVNNK 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ Q +A GCC
Sbjct: 182 PTVQ--VGQGSNVQSGSAGGCC 201
>gi|224284051|gb|ACN39763.1| unknown [Picea sitchensis]
Length = 216
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 134/211 (63%), Gaps = 13/211 (6%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAI 66
+ ++DYL KLL+IGDSGVGKS LLL F+ D+F TIG+DFK++ +++ GK++KL I
Sbjct: 9 RADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQI 68
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LV
Sbjct: 69 WDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILV 126
Query: 127 GNKVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
GNK D ES+R V G A E+G F E SAKT +NV+Q F + D LAE
Sbjct: 127 GNKADMDESKRAVPTARGQALADEFGIKFFETSAKTNLNVEQVFFTIA---RDIKQRLAE 183
Query: 186 GSKGLKKNIFK-QKP-----PEADAAASGCC 210
++ K KP P A S CC
Sbjct: 184 SDTKVEPQTIKINKPDPAKGPGKAAERSSCC 214
>gi|46138717|ref|XP_391049.1| YPT1_NEUCR GTP-binding protein ypt1 [Gibberella zeae PH-1]
gi|408390594|gb|EKJ69986.1| hypothetical protein FPSE_09831 [Fusarium pseudograminearum CS3096]
Length = 202
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDMSDKKVVEYSVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|119182590|ref|XP_001242423.1| GTP-binding protein ypt1 [Coccidioides immitis RS]
gi|303319289|ref|XP_003069644.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109330|gb|EER27499.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040923|gb|EFW22856.1| GTP-binding protein ypt1 [Coccidioides posadasii str. Silveira]
gi|392865315|gb|EAS31095.2| GTP-binding protein ypt1 [Coccidioides immitis RS]
Length = 201
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D E ++ V FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDMEDKKAVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|54696266|gb|AAV38505.1| RAB13, member RAS oncogene family [synthetic construct]
gi|61365863|gb|AAX42775.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 128/196 (65%), Gaps = 11/196 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D E++R V K++ ARE+G F E SAK+ +NV + F L IL L + G
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL----LKSGGR 176
Query: 188 KGLKKNIFKQKPPEAD 203
+ N KPP D
Sbjct: 177 RSGNGN----KPPSTD 188
>gi|351725923|ref|NP_001237621.1| uncharacterized protein LOC100499898 [Glycine max]
gi|255627505|gb|ACU14097.1| unknown [Glycine max]
Length = 201
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 126/204 (61%), Gaps = 8/204 (3%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
E+DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ V++ GK +KL IW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D +VV FA E G F+E SAK ++V+Q F + +I
Sbjct: 121 NKSDLVDNKVVDSLTAKAFADELGIPFLETSAKDSISVEQAFLTMTAEIKKKMGSQTTAG 180
Query: 188 KGLKKNIFKQKP-PEADAAASGCC 210
K + K +P P+ S CC
Sbjct: 181 KSAETVQMKGQPIPQ----KSNCC 200
>gi|310794670|gb|EFQ30131.1| Ras family protein [Glomerella graminicola M1.001]
gi|380490830|emb|CCF35739.1| GTP-binding protein ypt1 [Colletotrichum higginsianum]
Length = 202
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 123/174 (70%), Gaps = 3/174 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+++D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFKVK +DV GKK+KL +W
Sbjct: 3 KKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + ++L+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVSRMLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 181
NK D E++R V+K+ G A+++G F E SAK+ +NV++ F L IL S
Sbjct: 121 NKCDIEAKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLSLAHDILQKSS 174
>gi|451846002|gb|EMD59313.1| hypothetical protein COCSADRAFT_347867 [Cochliobolus sativus
ND90Pr]
Length = 224
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 116/172 (67%), Gaps = 3/172 (1%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+ +DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL
Sbjct: 23 SPHNRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKL 82
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KL
Sbjct: 83 QIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKL 140
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
LVGNK D ++VV FA G F+E SAK+ NV+Q F + +I
Sbjct: 141 LVGNKSDMADKKVVEYTVAKEFADSLGIPFLETSAKSATNVEQAFLTMARQI 192
>gi|402076033|gb|EJT71456.1| GTP-binding protein ypt1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 202
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|317031687|ref|XP_003188788.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|350640266|gb|EHA28619.1| hypothetical protein ASPNIDRAFT_202783 [Aspergillus niger ATCC
1015]
Length = 219
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 118/177 (66%), Gaps = 3/177 (1%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGG 59
+D + +DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ G
Sbjct: 13 IDPYANDLARYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG 72
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
K +KL IWDTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T +
Sbjct: 73 KTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-E 130
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
KLLVGNK D E ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 131 GVNKLLVGNKSDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 187
>gi|149244388|ref|XP_001526737.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449131|gb|EDK43387.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 207
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 133/209 (63%), Gaps = 9/209 (4%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAI 66
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTPSLL 183
GNK D +++V FA F+E SA + NV+Q F + +I + + + +
Sbjct: 120 GNKADLADKKIVEYTAAKEFADALNIPFLETSALSSTNVEQAFYTMARQIKAQMTSNANV 179
Query: 184 --AEGSKGLKKNIFKQKPPEADAAASGCC 210
A G+KG K N+ + ++ CC
Sbjct: 180 GGAAGNKG-KSNVNLRGESLTSTQSNSCC 207
>gi|395513171|ref|XP_003760803.1| PREDICTED: ras-related protein Rab-3A [Sarcophilus harrisii]
Length = 359
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 153 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNEKRIKL 212
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 213 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 270
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 271 LVGNKCDMEDERVVSSERGRQLAEHLGFEFFEASAKDNINVKQTFERLVDIICEKMSESL 330
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 331 DTADPAVTGAKQGPQLTDQQAPPHQDCA 358
>gi|302899086|ref|XP_003047976.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728908|gb|EEU42263.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 202
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDMSDKKVVEYSVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|343173211|gb|AEL99308.1| Ras-like protein, partial [Silene latifolia]
gi|343173213|gb|AEL99309.1| Ras-like protein, partial [Silene latifolia]
Length = 92
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/92 (90%), Positives = 87/92 (94%)
Query: 119 QDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
QDCIK+LVGNKVDKES+RVVTKKEGI+FAREYGCLFIECSAKTR NVQQCFEELVLKILD
Sbjct: 1 QDCIKMLVGNKVDKESDRVVTKKEGIDFAREYGCLFIECSAKTRANVQQCFEELVLKILD 60
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
TPSLLAEGS G KKNIFKQKPPE DA+ SGCC
Sbjct: 61 TPSLLAEGSAGGKKNIFKQKPPEDDASTSGCC 92
>gi|119617271|gb|EAW96865.1| hCG24991, isoform CRA_a [Homo sapiens]
gi|119617272|gb|EAW96866.1| hCG24991, isoform CRA_a [Homo sapiens]
Length = 203
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 127/196 (64%), Gaps = 11/196 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+ YD+T +F N+ + W K I + + + LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQN-WMKSI-MENASAGVEHLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D E++R V K++ ARE+G F E SAK+ +NV + F L IL L + G
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL----LKSGGR 176
Query: 188 KGLKKNIFKQKPPEAD 203
+ N KPP D
Sbjct: 177 RSGNGN----KPPSTD 188
>gi|219127381|ref|XP_002183915.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404638|gb|EEC44584.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 207
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 6/210 (2%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKK 61
S +++ +D KLLMIGDSGVGK+ LLL + +D+F TIG+DFK+K VDV G +
Sbjct: 2 SQASNSAPYDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVDVEGTR 61
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
+KL IWDTAGQERFRT+T+SY+RGAQGI++VYDVT R +F ++ + W +I ++ +
Sbjct: 62 IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRN-WISQIQQHA-DVHV 119
Query: 122 IKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 181
K+LVGNK D E+VV+ +EG A E+G F ECSAK ++V+ F + + D
Sbjct: 120 NKILVGNKCDMLDEKVVSTEEGQKLASEFGIPFFECSAKNDIHVESSFMHIAKAVKD--R 177
Query: 182 LLAEGSKGLK-KNIFKQKPPEADAAASGCC 210
L A+G G K KP ++ CC
Sbjct: 178 LKADGQGGPSAKTGLNLKPNQSGGKDKKCC 207
>gi|221057075|ref|XP_002259675.1| Rab1 protein [Plasmodium knowlesi strain H]
gi|193809747|emb|CAQ40449.1| Rab1 protein, putative [Plasmodium knowlesi strain H]
Length = 207
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 122/170 (71%), Gaps = 7/170 (4%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
+++DYL+K+++IGDSGVGKS +LL F+ D+F E TIGVDF+ + + VG K +KL IW
Sbjct: 7 RDYDYLYKIILIGDSGVGKSCILLRFSDDHFTESYITTIGVDFRFRRIKVGDKMVKLQIW 66
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TS+YYRGA GII++YD T R++F ++ + W EI+ Y+T + C KLLVG
Sbjct: 67 DTAGQERFRTITSAYYRGADGIIIIYDTTDRNSFLHIKE-WINEINKYTTEETC-KLLVG 124
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELV 173
NK D + E ++ EG N A+E G FIE SAK NV+ F EEL+
Sbjct: 125 NKSDCKDEMEISTTEGENKAKELGIPFIETSAKDATNVELAFTMITEELI 174
>gi|388498284|gb|AFK37208.1| unknown [Medicago truncatula]
Length = 203
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 124/202 (61%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKL +IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLPLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + R V+ FA + G F+E SAK NV+ F + I D + +
Sbjct: 122 KSDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRMASQPSANN 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ + P SGCC
Sbjct: 182 ARPPTVQIRGQPVGQ--KSGCC 201
>gi|225709362|gb|ACO10527.1| Ras-related protein Rab-10 [Caligus rogercresseyi]
Length = 198
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 130/195 (66%), Gaps = 11/195 (5%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K ++ GKK+KL
Sbjct: 2 AKKSYDLLFKLLLIGDSGVGKTCILFRFSEDTFNTTFISTIGIDFKIKTFELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYR A GI++VYDVT +F N++ W + I ++ ++ K++
Sbjct: 62 IWDTAGQERFHTITTSYYRNAMGIMLVYDVTNPKSFDNIAK-WLQNIQEHAA-EEVDKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD------- 178
+GNK D E +RV++K++G +REYG F+E SAKT VN+++ F +L IL+
Sbjct: 120 LGNKCDMEDKRVISKEKGEAISREYGIRFLETSAKTNVNIERAFMDLAESILERTPGVEE 179
Query: 179 -TPSLLAEGSKGLKK 192
PSL S G K
Sbjct: 180 PRPSLPPPNSSGQPK 194
>gi|54696260|gb|AAV38502.1| RAB3A, member RAS oncogene family [synthetic construct]
gi|61368754|gb|AAX43231.1| RAB3A member RAS oncogene family [synthetic construct]
Length = 221
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 129/208 (62%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELV-------LKIL 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV ++L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSELL 191
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 192 DTADPAVTGAKQGPQLSDQQVPPHQDCA 219
>gi|403072064|pdb|4FMB|B Chain B, Vira-Rab1 Complex Structure
gi|403072066|pdb|4FMB|D Chain D, Vira-Rab1 Complex Structure
gi|403072068|pdb|4FMB|F Chain F, Vira-Rab1 Complex Structure
Length = 171
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+D LFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 2 EYDALFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 61
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 119
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 120 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 167
>gi|212724108|ref|NP_001131632.1| uncharacterized protein LOC100192989 [Zea mays]
gi|242090779|ref|XP_002441222.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
gi|194690528|gb|ACF79348.1| unknown [Zea mays]
gi|194692096|gb|ACF80132.1| unknown [Zea mays]
gi|194700986|gb|ACF84577.1| unknown [Zea mays]
gi|194703832|gb|ACF86000.1| unknown [Zea mays]
gi|195628548|gb|ACG36104.1| ras-related protein ARA-3 [Zea mays]
gi|241946507|gb|EES19652.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
Length = 215
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 136/208 (65%), Gaps = 12/208 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE-G 186
K D ES+R V +G A EYG F E SAKT +NV+Q F + D LAE
Sbjct: 129 KADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIA---RDIKQRLAETD 185
Query: 187 SKGLKKNIFKQKP---PEADAAA-SGCC 210
SK K I KP EA AA S CC
Sbjct: 186 SKPEDKAIKINKPDQGSEAPAAQRSACC 213
>gi|443896742|dbj|GAC74085.1| GTP-binding protein SEC4 [Pseudozyma antarctica T-34]
Length = 208
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 133/206 (64%), Gaps = 8/206 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
+D+L KLL+IGDSGVGKS LLL F D + TIG+DFK++ +++ GK++KL IWD
Sbjct: 5 HYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++V+DVT + +F N+ W I+ +++ + K+L+GN
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVR-TWHANIEQHAS-EGVSKILIGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLA 184
K D E +R V+ ++G ARE G +IE SAK+ NV++ F E+ +++DT ++
Sbjct: 123 KSDWEEKRAVSTEQGEELARELGIPYIETSAKSNANVEEAFFNLAREVKTRLIDTAAVTQ 182
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
N+ P++ A GCC
Sbjct: 183 ASPAAAAGNVNVNSAPKS-GATGGCC 207
>gi|464526|sp|Q05975.1|RAB2_LYMST RecName: Full=Ras-related protein Rab-2
gi|288938|emb|CAA51234.1| RAB2 [Lymnaea stagnalis]
Length = 212
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 132/199 (66%), Gaps = 9/199 (4%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLAE 185
D E+ R V K+EG FARE+G +F+E SAKT NV++ F +E+ KI D +
Sbjct: 121 SDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGVFDINN 180
Query: 186 GSKGLKKNIFKQKPPEADA 204
+ G+K I Q P + +
Sbjct: 181 EANGIK--IGPQHSPASQS 197
>gi|158294114|ref|XP_556035.3| AGAP005393-PA [Anopheles gambiae str. PEST]
gi|157015414|gb|EAL39812.3| AGAP005393-PA [Anopheles gambiae str. PEST]
Length = 213
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 139/215 (64%), Gaps = 19/215 (8%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRR+TF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLAE 185
D +S R V K+EG FARE+G +F+E SA+T NV++ F +E+ KI + +
Sbjct: 121 SDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 186 GSKGLKKNIFKQKPPEADA----------AASGCC 210
+ G+K I +Q P + + A+SGCC
Sbjct: 181 EANGIK--IGQQHSPTSPSLGSGNSPGGPASSGCC 213
>gi|385888878|gb|AFI98561.1| RabE1 [Nicotiana benthamiana]
Length = 216
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 133/209 (63%), Gaps = 13/209 (6%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
K D ES+R V +G A EYG F E SAKT +NV+Q F + D LA+
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIA---RDIKQRLADTD 185
Query: 188 KGLKKNIFKQKPPEADAAA------SGCC 210
+ + K P+A A S CC
Sbjct: 186 SKAEPSTLKINQPDAGAGGSQAAQKSACC 214
>gi|213406139|ref|XP_002173841.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
gi|212001888|gb|EEB07548.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
Length = 204
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 127/202 (62%), Gaps = 5/202 (2%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ-DCIKLLVGN 128
AGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W +EID ++ +C LLVGN
Sbjct: 66 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLQEIDRFAVEGVNC--LLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV FA G F+E SAK NV+Q F + +I + S +
Sbjct: 123 KCDITDKKVVEYTVAKEFADGLGIPFLETSAKDSTNVEQAFLTMARQIKERMSNSTLNTA 182
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K + + ++SGCC
Sbjct: 183 SSKTTVKVGQGTNVSQSSSGCC 204
>gi|256066501|ref|XP_002570541.1| rab15 13 10 1 35 5 and [Schistosoma mansoni]
gi|350645538|emb|CCD59778.1| rab15, 13, 10, 1, 35, 5, and, putative [Schistosoma mansoni]
Length = 211
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 124/177 (70%), Gaps = 3/177 (1%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGG 59
M + +++D ++KLL++GDS VGK++LLL F+ ++F + TIG+DFKV+ +++ G
Sbjct: 1 MAKAPNGTKDYDEMYKLLLVGDSSVGKTNLLLRFSDNSFSKTFIATIGIDFKVRTIEIDG 60
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
KK+KL IWDTAGQERFRT+T++YYRGA GI++VYDVT D++ N++ W I + TN+
Sbjct: 61 KKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNLDSYHNIT-TWMNNITEH-TNE 118
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K+L+GNK D E++RVV + G A+ YG FIE SAK +NV + F L KI
Sbjct: 119 GVAKMLLGNKCDLEAQRVVKYENGFKLAQSYGISFIETSAKGGINVSEAFTILARKI 175
>gi|124506171|ref|XP_001351683.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
gi|13375179|emb|CAC34553.1| putative GTPase [Plasmodium falciparum 3D7]
gi|23504611|emb|CAD51490.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
Length = 200
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 6/201 (2%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+D LFK+L+IGDSGVGKS LLL F D + + TIGVDFK+K +++ K +KL IWDT
Sbjct: 5 YDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+TSSYYRGAQGII+VYDVT RD+F N+ + W EI+ Y++ +D K+L+GNK
Sbjct: 65 AGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKN-WIIEIEKYAS-EDVQKILIGNK 122
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
+D +++R V+ +EG A F+E SAK NV+Q F+ + +I + S +KG
Sbjct: 123 IDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAYEIKN-KSQHETINKG 181
Query: 190 LKKNIFKQKPPEADAAASGCC 210
K NI P D CC
Sbjct: 182 -KTNINLNARPIKDTKKK-CC 200
>gi|449431874|ref|XP_004133725.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 204
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 123/200 (61%), Gaps = 6/200 (3%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ V++ GK +KL IWDTA
Sbjct: 9 DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 68
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVGNK
Sbjct: 69 GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGNKC 126
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL 190
D +VV + FA E G F+E SAK NV+Q F + +I SK
Sbjct: 127 DLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKKMGSQPTSSKSS 186
Query: 191 KKNIFKQKPPEADAAASGCC 210
K +P + S CC
Sbjct: 187 GNVQMKGQPIQ---QKSSCC 203
>gi|448519756|ref|XP_003868152.1| Ypt1 protein [Candida orthopsilosis Co 90-125]
gi|380352491|emb|CCG22717.1| Ypt1 protein [Candida orthopsilosis]
Length = 207
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 133/209 (63%), Gaps = 9/209 (4%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAI 66
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTPSLL 183
GNK D +++V FA F+E SA + NV+Q F + +I + + S +
Sbjct: 120 GNKADLADKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMASNSNV 179
Query: 184 --AEGSKGLKKNIFKQKPPEADAAASGCC 210
A G+KG K N+ + ++ CC
Sbjct: 180 GNAAGNKG-KTNVNLRGESLTSNQSNSCC 207
>gi|224496098|ref|NP_001139069.1| RAB3D, member RAS oncogene family, a [Danio rerio]
Length = 223
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 130/211 (61%), Gaps = 13/211 (6%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLA 65
+ Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K++KL
Sbjct: 18 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVYRNEKRVKLQ 77
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQER+RT+T++YYRGA G +++YD+T +D+F + D WA +I YS + + +L
Sbjct: 78 IWDTAGQERYRTITTAYYRGAMGFLLMYDITNQDSFYAVQD-WATQIKTYSWDNAQV-IL 135
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------LD 178
VGNK D E +R+V +++G A E G F E SAK +NV+Q FE LV I LD
Sbjct: 136 VGNKCDLEDDRLVAREDGQRLANELGFQFFEASAKDNINVKQVFERLVDIICDKMNESLD 195
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEADAAASGC 209
T + KG + PP+ + GC
Sbjct: 196 TDPSILTNQKGPS---LQDTPPDGQSGGCGC 223
>gi|154318598|ref|XP_001558617.1| GTP-binding protein ypt1 [Botryotinia fuckeliana B05.10]
Length = 201
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDMSDKKVVDYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|357135065|ref|XP_003569132.1| PREDICTED: ras-related protein RABD1-like [Brachypodium distachyon]
Length = 205
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 113/161 (70%), Gaps = 3/161 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDS VGKS LLL F D + + TIGVDFK++ V++ GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ C KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQ-WLSEIDRYASDSVC-KLLVGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
K D +VV +E A G F+E SAK +NV++ F
Sbjct: 123 KCDLVDSKVVDTEEAKALADSLGMTFLETSAKESINVEKAF 163
>gi|242047780|ref|XP_002461636.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
gi|241925013|gb|EER98157.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
Length = 216
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 138/211 (65%), Gaps = 7/211 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTI-GVDFKVKYVDVGGKKLK 63
S S+ ++D+L KLL+IGDSGVGKS LLL F+ D F T G+DFKV+ V++ GK++K
Sbjct: 6 SRSRGDYDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKRVK 65
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K
Sbjct: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNK 123
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT-PSL 182
+LVGNKVD +++RVV+ +G A EYG F E SAKT NV+Q F + I
Sbjct: 124 ILVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNQNVEQVFFTMARDIKQRLTET 183
Query: 183 LAEGSKGLKKNIFKQKPPEADAAA---SGCC 210
+A ++ I + P +A A+ S CC
Sbjct: 184 VAAATEPPTIQISRPDPDQAGTASSRWSSCC 214
>gi|449300739|gb|EMC96751.1| hypothetical protein BAUCODRAFT_34142 [Baudoinia compniacensis UAMH
10762]
Length = 201
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDMADKKVVEYTVAKEFADSLGIQFLETSAKNASNVEQAFLTMARQI 169
>gi|254570485|ref|XP_002492352.1| Secretory vesicle-associated Rab GTPase essential for exocytosis
[Komagataella pastoris GS115]
gi|12381851|emb|CAC24717.1| Sec4p [Komagataella pastoris]
gi|238032150|emb|CAY70093.1| Secretory vesicle-associated Rab GTPase essential for exocytosis
[Komagataella pastoris GS115]
gi|328353638|emb|CCA40036.1| Ras-related protein RIC1 [Komagataella pastoris CBS 7435]
Length = 204
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 132/213 (61%), Gaps = 12/213 (5%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGG 59
M S S+Q++D KLL++GDSGVGKS LLL F D+F TIG+DFK++ V++ G
Sbjct: 1 MASRGTSRQQYDLTMKLLLVGDSGVGKSCLLLRFVDDSFNPSFITTIGIDFKIRTVEING 60
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
KK+KL IWDTAGQERFRT+T++YYRGA GII+VYDVT +F ++ + W + ++ ++ N+
Sbjct: 61 KKVKLQIWDTAGQERFRTITTAYYRGAMGIILVYDVTDERSFNSVHN-WYQTLNQHA-NE 118
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT 179
D LVGNK D E R VTK++G A E G F+E SAK+ NV F EL + +
Sbjct: 119 DAQLFLVGNKCDDEESRQVTKEQGEQLASELGVPFLEASAKSNKNVDAIFLELAKRFEEK 178
Query: 180 --PSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
+ GS G+ N ++ S CC
Sbjct: 179 MRNTQQGPGSAGIDVN-------SSNDTKSSCC 204
>gi|15229836|ref|NP_187779.1| Ras-related protein RABD1 [Arabidopsis thaliana]
gi|75338904|sp|Q9ZRE2.1|RABD1_ARATH RecName: Full=Ras-related protein RABD1; Short=AtRABD1; AltName:
Full=Ras-related protein ATFP8
gi|6671929|gb|AAF23189.1|AC016795_2 putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|4097557|gb|AAD00111.1| ATFP8 [Arabidopsis thaliana]
gi|26451349|dbj|BAC42775.1| putative GTP-binding protein ATFP8 [Arabidopsis thaliana]
gi|28973343|gb|AAO63996.1| putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|332641569|gb|AEE75090.1| Ras-related protein RABD1 [Arabidopsis thaliana]
Length = 205
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 122/202 (60%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDS VGKS LLL F D + + TIGVDFK++ ++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD T ++F N+ W EID Y+ N+ KLL+GN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQ-WLSEIDRYA-NESVCKLLIGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +VV+ + G A E G F+E SAK +NV+Q F + +I +K
Sbjct: 122 KNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANK 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ K GCC
Sbjct: 182 TSGPGTVQMKGQPIQQNNGGCC 203
>gi|357163775|ref|XP_003579842.1| PREDICTED: GTP-binding protein YPTM1-like [Brachypodium distachyon]
Length = 212
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 111/162 (68%), Gaps = 3/162 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
EFDYLFKLL+IGDS VGKS LL F D + + TIGVDFK++ V++ GK +KL IW
Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDAYVDSYISTIGVDFKIRTVEIDGKTIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GII+VYD+T ++F N+ W EID Y+ + C KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGANGIIIVYDITDMESFNNVKQ-WLSEIDKYANDSVC-KLLVG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
NK D RVV +A E G F+E SAK +NV++ F
Sbjct: 121 NKCDLAESRVVDTSVAQAYADEIGIPFLETSAKDSINVEEAF 162
>gi|19112997|ref|NP_596205.1| GTPase Ypt1 [Schizosaccharomyces pombe 972h-]
gi|141302|sp|P11620.2|YPT1_SCHPO RecName: Full=GTP-binding protein ypt1
gi|5148|emb|CAA36319.1| ypt1 [Schizosaccharomyces pombe]
gi|6723924|emb|CAB66454.1| GTPase Ypt1 [Schizosaccharomyces pombe]
Length = 203
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 125/202 (61%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ ++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W +EID Y+ + +LLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLQEIDRYAV-EGVNRLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV FA F+E SAK NV+Q F + +I + S
Sbjct: 122 KSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASS 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K ++ + ++S CC
Sbjct: 182 NAKSSVKVGQGTNVSQSSSNCC 203
>gi|313221470|emb|CBY32219.1| unnamed protein product [Oikopleura dioica]
gi|313230502|emb|CBY18718.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 128/203 (63%), Gaps = 4/203 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F+ D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDTYSESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ESVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPSLLAEGS 187
K D +++VV +A F+E SAK NV+Q F + +I +
Sbjct: 122 KCDMTTKKVVDYTTAKEYADSLNIPFLETSAKNNTNVEQAFLTMASEIKNKMGPGSGPSP 181
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
G + N+ K + GCC
Sbjct: 182 SGPRGNVDIGKTNSVGNKSGGCC 204
>gi|270346387|pdb|2WWX|A Chain A, Crystal Structure Of The SidmDRRA(GEFGDF DOMAIN)-Rab1
(Gtpase Domain) Complex
Length = 175
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGI 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 169
>gi|154276982|ref|XP_001539336.1| GTP-binding protein ypt1 [Ajellomyces capsulatus NAm1]
gi|150414409|gb|EDN09774.1| GTP-binding protein ypt1 [Ajellomyces capsulatus NAm1]
Length = 204
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 117/171 (68%), Gaps = 3/171 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLA 65
S+ +DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL
Sbjct: 4 SETLYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQ 63
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLL
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLL 121
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
VGNK D E ++ V FA G F+E SAK+ NV+Q F + +I
Sbjct: 122 VGNKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 172
>gi|389624109|ref|XP_003709708.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
gi|351649237|gb|EHA57096.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
Length = 202
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDMADKKVVDYTVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQI 169
>gi|297833958|ref|XP_002884861.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
gi|297330701|gb|EFH61120.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 122/202 (60%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDS VGKS LLL F D + + TIGVDFK++ ++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD T ++F N+ W EID Y+ N+ KLL+GN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQ-WLSEIDRYA-NESVCKLLIGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +VV+ + G A E G F+E SAK +NV+Q F + +I +K
Sbjct: 122 KNDMVENKVVSTETGKALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANK 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ K GCC
Sbjct: 182 TSGPGTVQMKGQPIQQNNGGCC 203
>gi|260949313|ref|XP_002618953.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
gi|238846525|gb|EEQ35989.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
Length = 206
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 128/205 (62%), Gaps = 6/205 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F + + ++ TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADNTYTQDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTPSLLAE 185
K D ++VV FA F+E SA + NV+Q F + +I + + S
Sbjct: 122 KADLSDKKVVEYTTAKEFAEALDIPFLETSALSSSNVEQAFYTMARQIKAQMTSNSGAGA 181
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
K N+ + ++ CC
Sbjct: 182 SGGNAKSNVNLRGQSLTSNQSNSCC 206
>gi|4506367|ref|NP_002857.1| ras-related protein Rab-3A [Homo sapiens]
gi|383873155|ref|NP_001244696.1| ras-related protein Rab-3A [Macaca mulatta]
gi|114676111|ref|XP_512511.2| PREDICTED: ras-related protein Rab-3A isoform 3 [Pan troglodytes]
gi|296233287|ref|XP_002761948.1| PREDICTED: ras-related protein Rab-3A [Callithrix jacchus]
gi|397493887|ref|XP_003817827.1| PREDICTED: ras-related protein Rab-3A isoform 1 [Pan paniscus]
gi|397493889|ref|XP_003817828.1| PREDICTED: ras-related protein Rab-3A isoform 2 [Pan paniscus]
gi|402904778|ref|XP_003915217.1| PREDICTED: ras-related protein Rab-3A [Papio anubis]
gi|403303431|ref|XP_003942330.1| PREDICTED: ras-related protein Rab-3A [Saimiri boliviensis
boliviensis]
gi|410053467|ref|XP_003953458.1| PREDICTED: ras-related protein Rab-3A [Pan troglodytes]
gi|426387780|ref|XP_004060340.1| PREDICTED: ras-related protein Rab-3A [Gorilla gorilla gorilla]
gi|131801|sp|P20336.1|RAB3A_HUMAN RecName: Full=Ras-related protein Rab-3A
gi|75075791|sp|Q4R4R9.1|RAB3A_MACFA RecName: Full=Ras-related protein Rab-3A
gi|7684383|gb|AAF67385.1|AC068499_1 RAB3A, member RAS oncogene family [Homo sapiens]
gi|20379038|gb|AAM21079.1|AF498931_1 small GTP binding protein RAB3A [Homo sapiens]
gi|550064|gb|AAA60242.1| GTP-binding protein [Homo sapiens]
gi|5678931|gb|AAD46811.1| GTP-binding protein [Homo sapiens]
gi|15079994|gb|AAH11782.1| RAB3A, member RAS oncogene family [Homo sapiens]
gi|67971128|dbj|BAE01906.1| unnamed protein product [Macaca fascicularis]
gi|119605078|gb|EAW84672.1| RAB3A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119605079|gb|EAW84673.1| RAB3A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119605080|gb|EAW84674.1| RAB3A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|158260141|dbj|BAF82248.1| unnamed protein product [Homo sapiens]
gi|190689931|gb|ACE86740.1| RAB3A, member RAS oncogene family protein [synthetic construct]
gi|190691303|gb|ACE87426.1| RAB3A, member RAS oncogene family protein [synthetic construct]
gi|208967240|dbj|BAG73634.1| RAB3A, member RAS oncogene family [synthetic construct]
gi|351701226|gb|EHB04145.1| Ras-related protein Rab-3A [Heterocephalus glaber]
gi|355703320|gb|EHH29811.1| Ras-related protein Rab-3A [Macaca mulatta]
gi|355763570|gb|EHH62193.1| Ras-related protein Rab-3A [Macaca fascicularis]
gi|380783409|gb|AFE63580.1| ras-related protein Rab-3A [Macaca mulatta]
gi|383413957|gb|AFH30192.1| ras-related protein Rab-3A [Macaca mulatta]
gi|384944492|gb|AFI35851.1| ras-related protein Rab-3A [Macaca mulatta]
gi|410216084|gb|JAA05261.1| RAB3A, member RAS oncogene family [Pan troglodytes]
gi|410250372|gb|JAA13153.1| RAB3A, member RAS oncogene family [Pan troglodytes]
gi|410295286|gb|JAA26243.1| RAB3A, member RAS oncogene family [Pan troglodytes]
gi|410337961|gb|JAA37927.1| RAB3A, member RAS oncogene family [Pan troglodytes]
Length = 220
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 192 DTADPAVTGAKQGPQLSDQQVPPHQDCA 219
>gi|332016796|gb|EGI57617.1| Ras-related protein Rab-3 [Acromyrmex echinatior]
Length = 260
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 130/218 (59%), Gaps = 11/218 (5%)
Query: 2 DSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGK 60
D A+ Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K
Sbjct: 45 DGRDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDK 104
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
++KL IWDTAGQER+RT+T++YYRGA G I++YD+T ++F ++ D W +I YS +
Sbjct: 105 RVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD-WVTQIKNYSWDNA 163
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT- 179
+ +LVGNK D E ERV++ + G A + G F E SAK +NV+ FE+LV I D
Sbjct: 164 QV-ILVGNKCDMEEERVISTERGKQLAEQLGVRFFETSAKENINVKAVFEQLVDIICDKM 222
Query: 180 -------PSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
P+L+ G G K P A A+ C
Sbjct: 223 SESLDNDPTLMGAGGMGQNKGQRLTDQPTNPANANCNC 260
>gi|196008991|ref|XP_002114361.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
gi|190583380|gb|EDV23451.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
Length = 205
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 136/206 (66%), Gaps = 7/206 (3%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
S++ +D LFK+L+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 2 SKKTYDLLFKILLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T+R +F N++ W + ID +++ +D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDLTQRKSFENINK-WIRNIDEHAS-KDVEKII 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPSLLA 184
+GNKVD+ +R V K E AR + F+E SAKT +N+ F L IL+ P +
Sbjct: 120 LGNKVDEADKREVLKSEAEELARIHSIRFMETSAKTNINIDAAFLGLANDILNKMPGKRS 179
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
+ S+ + +I P ++ GCC
Sbjct: 180 QASETI--SIQNHSRPNSN-QKRGCC 202
>gi|156063734|ref|XP_001597789.1| GTP-binding protein ypt1 [Sclerotinia sclerotiorum 1980]
gi|154697319|gb|EDN97057.1| GTP-binding protein ypt1 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 201
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 KSDMSDKKVVDYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|401623107|gb|EJS41224.1| sec4p [Saccharomyces arboricola H-6]
Length = 215
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 138/214 (64%), Gaps = 9/214 (4%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGG 59
+ +SS + + +D + K+L+IGDSGVGKS LL+ F D F TIG+DFK+K VD+ G
Sbjct: 7 VSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
KK+KL +WDTAGQERFRT+T++YYRGA GII+VYDVT TFTN+ W K ++ ++ N
Sbjct: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-ND 124
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF---EELVLKI 176
+ LLVGNK D ++ RVVT +G A+E G FIE SAK NV + F +L+ +
Sbjct: 125 EAQLLLVGNKSDMDT-RVVTADQGEALAKELGIPFIESSAKNDNNVNEIFFTLAKLIQEK 183
Query: 177 LDTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
+D+ L+ G+ G + NI + + S CC
Sbjct: 184 IDSNKLVGVGN-GKEGNI-SINSGNGNNSKSNCC 215
>gi|449458327|ref|XP_004146899.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
gi|449519234|ref|XP_004166640.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
Length = 201
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 118/168 (70%), Gaps = 4/168 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D + R V+ + FA E G F+E SAK NV+Q F + I
Sbjct: 122 KCDLPN-RAVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADI 168
>gi|328871755|gb|EGG20125.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 128/184 (69%), Gaps = 7/184 (3%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKK 61
++S +DYL KLL+IGDSGVGKS LLL F+ D+F TIG+DFK++ +++ GK+
Sbjct: 7 TASNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKR 66
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
+KL IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++T +
Sbjct: 67 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHAT-ESV 124
Query: 122 IKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKIL 177
K+L+GNK D ++VV G A EYG F+E SAK +NV++ F +++ +++
Sbjct: 125 NKMLIGNKCDLPEKKVVDSSRGKALADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMI 184
Query: 178 DTPS 181
DTP+
Sbjct: 185 DTPN 188
>gi|67528150|ref|XP_661885.1| YPT1_NEUCR GTP-binding protein ypt1 [Aspergillus nidulans FGSC A4]
gi|40739629|gb|EAA58819.1| YPT1_NEUCR GTP-binding protein ypt1 [Aspergillus nidulans FGSC A4]
Length = 200
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDT
Sbjct: 4 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 63
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGNK
Sbjct: 64 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 121
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
D E ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 122 SDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 168
>gi|323451357|gb|EGB07234.1| hypothetical protein AURANDRAFT_69836 [Aureococcus anophagefferens]
Length = 198
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 125/207 (60%), Gaps = 12/207 (5%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKL 64
A+ +D KLLMIGDS VGK+SLLL + +D F TIG+DFK+K +++ GK++KL
Sbjct: 2 AAHGPYDLQIKLLMIGDSAVGKTSLLLRYANDTFSSTFITTIGIDFKIKTINLDGKRVKL 61
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQE+FRT+T SY+RGAQGI++VYD+T R TF ++ W +I+ ++ Q K+
Sbjct: 62 QIWDTAGQEQFRTITRSYFRGAQGIVLVYDITDRGTFNSVRS-WMAQINEHADGQ-VNKI 119
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPSLL 183
LVGNK D S R V+ EG A EYG FIE SAK VNV + F + ++ PS
Sbjct: 120 LVGNKCDNSSARKVSADEGRKLADEYGVRFIETSAKQNVNVTEAFRAIAQQVTSRIPSRA 179
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A G K + GCC
Sbjct: 180 AGG--------VKLQSAAKPGGKKGCC 198
>gi|358371548|dbj|GAA88155.1| GTP-binding protein ypt1, partial [Aspergillus kawachii IFO 4308]
Length = 197
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDT
Sbjct: 1 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 60
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGNK
Sbjct: 61 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 118
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
D E ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 119 SDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 165
>gi|164660430|ref|XP_001731338.1| hypothetical protein MGL_1521 [Malassezia globosa CBS 7966]
gi|159105238|gb|EDP44124.1| hypothetical protein MGL_1521 [Malassezia globosa CBS 7966]
Length = 229
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNF--EELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQ 72
KLL+IG SGVGKS+L+ +T D F E+ + TIGVD+K+K + V GK KL+IWDTAGQ
Sbjct: 13 LKLLLIGSSGVGKSALVRRYTDDVFVEEDAAATIGVDYKIKSLCVDGKWFKLSIWDTAGQ 72
Query: 73 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDK 132
ER+RTLTSSYYRGAQG++++YDVT ++ ++ W E+ + + + LL GNKVD
Sbjct: 73 ERYRTLTSSYYRGAQGVVILYDVTDLRSYEDVPQ-WVHELRTFEGDVPPVCLLAGNKVDI 131
Query: 133 ESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKK 192
ER V+ ++G +A+E G LF+ECSAK V F+ELV K++ TP+L + G+++
Sbjct: 132 AEERQVSTEQGQAYAQENGMLFVECSAKAGQGVDHAFDELVRKVVSTPALWLHVAPGVRR 191
>gi|162463546|ref|NP_001105546.1| GTP-binding protein YPTM1 [Zea mays]
gi|466170|sp|P16976.2|YPTM1_MAIZE RecName: Full=GTP-binding protein YPTM1
gi|287833|emb|CAA44918.1| yptm1 [Zea mays]
Length = 208
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 111/161 (68%), Gaps = 3/161 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
EFDYLFKLL+IGDS VGKS LL F D++ + TIGVDFK++ V+V GK +KL IWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD+T ++F N+ W EID Y+ N KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLDEIDRYA-NDSVRKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
K D R V +A+E G F+E SAK +NV++ F
Sbjct: 122 KCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAF 162
>gi|308044223|ref|NP_001183904.1| uncharacterized protein LOC100502497 [Zea mays]
gi|238015358|gb|ACR38714.1| unknown [Zea mays]
Length = 214
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 134/206 (65%), Gaps = 9/206 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++D+L KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ V++ GK++KL IWD
Sbjct: 11 DYDFLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
K D ES+R V +G A EYG F E SAKT +NV+Q F + I L S
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDI--KQRLSESDS 186
Query: 188 KGLKKNIFKQKPPEADAAA---SGCC 210
K + I +P +A+A S CC
Sbjct: 187 KPEDRTISINRPDGGEASASQKSACC 212
>gi|302756377|ref|XP_002961612.1| rab family GTPase [Selaginella moellendorffii]
gi|302775546|ref|XP_002971190.1| rab family GTPase [Selaginella moellendorffii]
gi|300161172|gb|EFJ27788.1| rab family GTPase [Selaginella moellendorffii]
gi|300170271|gb|EFJ36872.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 137/219 (62%), Gaps = 27/219 (12%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLA 65
++ ++DYL KLL+IGDSGVGKS LLL F+ D+F TIG+DFK++ VD+ GK++KL
Sbjct: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTVDLDGKRIKLQ 67
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+L
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKIL 125
Query: 126 VGNKVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
VGNK D ES+R V+ + G A E+G F E SAKT +NV++ F + D LA
Sbjct: 126 VGNKADMDESKRAVSTERGQALANEFGIKFFETSAKTNLNVEKVFFTIA---GDIKRRLA 182
Query: 185 EGSKGLKKNIFKQKPPE-------------ADAAASGCC 210
E + +PP +D A S CC
Sbjct: 183 ETDS-------RPEPPRINNIVLDPSKDQGSDKAKSTCC 214
>gi|66814402|ref|XP_641380.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134228|sp|P20790.1|RAB8A_DICDI RecName: Full=Ras-related protein Rab-8A; AltName: Full=GTP-binding
protein SAS1
gi|167877|gb|AAA33249.1| GTP-binding protein SAS1 [Dictyostelium discoideum]
gi|60469254|gb|EAL67248.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 126/176 (71%), Gaps = 7/176 (3%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYL KLL+IGDSGVGKS LLL F+ D+F TIG+DFK++ +++ GK++KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++T+ K+L+GNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHATDS-VNKMLIGNK 129
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPS 181
D ++VV G + A EYG F+E SAK +NV++ F +++ +++DTP+
Sbjct: 130 CDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTPN 185
>gi|145515201|ref|XP_001443500.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834479|emb|CAI44558.1| rab_A52 [Paramecium tetraurelia]
gi|124410889|emb|CAK76103.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 129/211 (61%), Gaps = 7/211 (3%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKK 61
S A+ Q++D+L K+++IGDSGVGK+++L F F T+GVDFK+K +DV GKK
Sbjct: 2 SKQANSQDYDWLVKVIVIGDSGVGKTNILSQFCDAKFSITHMATLGVDFKIKTIDVDGKK 61
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
LKL IWDTAGQERFR +T +YY+GAQG+I+ Y V R +F N+ D W + I + + D
Sbjct: 62 LKLQIWDTAGQERFRNITKTYYKGAQGVILTYSVIDRQSFQNV-DGWLRSIQENTNSSDV 120
Query: 122 IKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 181
+LVGNK D +ER VT +EG +++Y F E SAK+ +N+ + F L +I+ T S
Sbjct: 121 QLVLVGNKADMSAERQVTLEEGKKMSQQYNIPFFETSAKSNMNINEAFNNLAFRIIQTLS 180
Query: 182 LLAEGSKGLKKNIFKQKPPEA--DAAASGCC 210
+ + N+ KP E + CC
Sbjct: 181 KMQTNEEKQNLNL---KPSEGKDKPKSESCC 208
>gi|52353602|gb|AAU44168.1| putative rab1 small GTP-binding protein [Oryza sativa Japonica
Group]
Length = 205
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 113/159 (71%), Gaps = 3/159 (1%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ +++ GK +KL IWDTA
Sbjct: 5 DYLFKLLLIGDSSVGKSCLLLRFADDSYIDTYISTIGVDFKIRTIELDGKTVKLQIWDTA 64
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ C KLLVGNK
Sbjct: 65 GQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQ-WLSEIDRYASDSVC-KLLVGNKC 122
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D +VV +E FA G F+E SAK +NV++ F
Sbjct: 123 DLVDSKVVDTEEAKAFAESLGISFLETSAKESINVEEAF 161
>gi|417396973|gb|JAA45520.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 200
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D + +RVV K +G A+E+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|90085076|dbj|BAE91279.1| unnamed protein product [Macaca fascicularis]
Length = 187
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWDT 69
+D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+KL +WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+GNK
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLGNK 122
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
D E++R V K++ ARE+G F E SAK+ +NV + F L IL
Sbjct: 123 CDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 170
>gi|395859792|ref|XP_003802215.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Otolemur
garnettii]
Length = 212
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 132/205 (64%), Gaps = 12/205 (5%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLAE 185
D ES R V K+EG FARE+G +F+E SAKT NV++ F +E+ KI + +
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
+ G+K P A A+ C
Sbjct: 181 EANGIKIG-----PQHAATNATHAC 200
>gi|357111103|ref|XP_003557354.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 138/213 (64%), Gaps = 9/213 (4%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKK 61
+ + ++ ++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ V++ GK+
Sbjct: 4 TPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTASFITTIGIDFKIRTVELDGKR 63
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
+KL IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ +
Sbjct: 64 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NV 121
Query: 122 IKLLVGNKVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
K+LVGNK D ES++ + +G A EYG F E AKT +NV+Q F + I
Sbjct: 122 NKILVGNKADMDESKKALPTSKGQALADEYGIPFFETGAKTNLNVEQVFFSIAKDI--KQ 179
Query: 181 SLLAEGSKGLKKNIFKQKPP---EADAAASGCC 210
L+ SK + I KP EA A+ S CC
Sbjct: 180 RLVKTDSKPEDRTIKIDKPECNGEATASRSACC 212
>gi|357440493|ref|XP_003590524.1| Ras-like protein [Medicago truncatula]
gi|355479572|gb|AES60775.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 134/212 (63%), Gaps = 13/212 (6%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLA 65
++ ++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+L
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN-WIRNIEQHASD-NVNKIL 125
Query: 126 VGNKVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
VGNK D ES+R V +G A EYG F E SAKT +NV++ F + D LA
Sbjct: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIA---RDIKQRLA 182
Query: 185 EGSKGLKKNIFKQKPPEADAAA------SGCC 210
E + K P+ A + S CC
Sbjct: 183 ESDSKTEPQTLKINQPDQGAGSAQASQTSSCC 214
>gi|345569442|gb|EGX52308.1| hypothetical protein AOL_s00043g97 [Arthrobotrys oligospora ATCC
24927]
Length = 203
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 132/207 (63%), Gaps = 7/207 (3%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A + +D+L KLL+IGDSGVGKS LL F+ D+F TIG+DFK++ +D+ GK++KL
Sbjct: 2 AGSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIDLDGKRIKL 61
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W + ++ ++T + K+
Sbjct: 62 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIQ-TWFQNVEQHAT-EGVNKI 119
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
L+GNK D E +RVV+ + G A E G F+E SAK +NV++ F +L D +
Sbjct: 120 LIGNKCDWEEKRVVSTERGQALANELGIPFMEVSAKANINVEEAF---LLLARDIKKRIM 176
Query: 185 EGSKGLKKNIFKQKPPEADAAASG-CC 210
+ S G K E +AA G CC
Sbjct: 177 DSSSGEKNQPGVVNVNETSSAAGGKCC 203
>gi|91093088|ref|XP_969292.1| PREDICTED: similar to ras-related protein Rab-3C, putative
[Tribolium castaneum]
Length = 219
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 132/207 (63%), Gaps = 11/207 (5%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A+ Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K++KL
Sbjct: 12 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKL 71
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F ++ D W +I YS + + +
Sbjct: 72 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD-WVTQIKTYSWDNAQV-I 129
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERV++ + G A + G F E SAK +NV+ FE LV I L
Sbjct: 130 LVGNKCDMEDERVISFERGKQLAEQLGVEFFETSAKENINVKAVFERLVDIICDKMSDSL 189
Query: 178 DT-PSLLAEGSKGLKKNIFKQKPPEAD 203
DT P+L++ G+KG + Q P A+
Sbjct: 190 DTDPTLMSGGAKGQRLTDAPQGPQAAN 216
>gi|5146|emb|CAA33192.1| YPT1-related protein [Schizosaccharomyces pombe]
Length = 206
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 127/207 (61%), Gaps = 3/207 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
+A+ +DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ ++ GK +K
Sbjct: 2 NANINRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W +EID Y+ + +
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLQEIDRYAV-EGVNR 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D ++VV FA F+E SAK NV+Q F + +I +
Sbjct: 120 LLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNN 179
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
S K ++ + ++S CC
Sbjct: 180 TFASSNAKSSVKVGQGTNVSQSSSNCC 206
>gi|388855844|emb|CCF50628.1| probable SEC4-like Rab/GTPase [Ustilago hordei]
Length = 208
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 132/206 (64%), Gaps = 8/206 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
+D+L KLL+IGDSGVGKS LLL F D + TIG+DFK++ +++ GK++KL IWD
Sbjct: 5 HYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++V+DVT + +F N+ W I+ +++ + K+L+GN
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVR-TWHANIEQHAS-EGVSKILIGN 122
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLA 184
K D E +R VT ++G A+E G +IE SAK+ NV++ F E+ +++DT ++
Sbjct: 123 KSDWEEKRAVTTEQGEELAKELGIPYIETSAKSNSNVEEAFFNLAREVKTRLIDTAAVTQ 182
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
N+ P+ A GCC
Sbjct: 183 ASPAAASANVNVNSAPKT-GGAGGCC 207
>gi|417398094|gb|JAA46080.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 267
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|328790442|ref|XP_003251420.1| PREDICTED: ras-related protein Rab-35-like [Apis mellifera]
gi|380017688|ref|XP_003692779.1| PREDICTED: ras-related protein Rab-35-like [Apis florea]
Length = 201
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 120/174 (68%), Gaps = 6/174 (3%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIW 67
+E+D+LFKLL+IGDSGVGKSSLLL F + F TIGVDFK++ VDV G+++KL IW
Sbjct: 3 REYDHLFKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVDVDGERVKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCI-KLLV 126
DTAGQERFRT+TS+YYRG G+I+VYDVT D+F N+ W EI+ N D + ++LV
Sbjct: 63 DTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKR-WLHEIE---QNCDVVNRVLV 118
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
GNK D +E+VV ++ FA + G E SAK VNVQ+ F + ++L T
Sbjct: 119 GNKNDAPNEKVVLTEDAQRFANQMGIQLFETSAKDNVNVQEMFMAITRQVLRTK 172
>gi|428672259|gb|EKX73173.1| Ras-related protein Rab1b small GTP-binding protein [Babesia equi]
Length = 220
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 115/162 (70%), Gaps = 2/162 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIW 67
+E+DYLFK+++IGDSG GKSSLLL F + + E TIGVDFK+K V + +KL IW
Sbjct: 2 KEYDYLFKIIVIGDSGCGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNITIKLQIW 61
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TS+YYRGA GII VYDVT + +F ++++ W +I+ Y+T+ + KLL+G
Sbjct: 62 DTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLTDIERYATS-NVSKLLIG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
NK+D RVVT +E A + +IE SAKT NV++ F
Sbjct: 121 NKIDLADNRVVTSEEAKQVAEAHNMNYIEASAKTDSNVEKAF 162
>gi|1588651|prf||2209256A rab2 gene
Length = 220
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|345322815|ref|XP_003430635.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Ornithorhynchus anatinus]
Length = 200
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 123/176 (69%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGD GVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDXGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D E +RVV K +G A+E+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMEDKRVVLKTKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|326934043|ref|XP_003213106.1| PREDICTED: ras-related protein Rab-18-B-like [Meleagris gallopavo]
Length = 244
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 83/139 (59%), Positives = 107/139 (76%), Gaps = 2/139 (1%)
Query: 45 TIGVDFKVKYVDVGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL 104
T+GVDFKVK + V G ++LAIWDTAGQERFR+L SYYRG QGI++VYDVTR+DTFT L
Sbjct: 79 TMGVDFKVKKMVVNGHTVQLAIWDTAGQERFRSLNPSYYRGTQGIVLVYDVTRKDTFTGL 138
Query: 105 SDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVN 164
+ W E+++Y+T + +K+LVGNK DK +R V ++EG+ FA++ LFIE SAKT
Sbjct: 139 -ESWLNELEIYTTKSNTVKMLVGNKTDK-PDREVERREGLQFAKKRSLLFIETSAKTEDG 196
Query: 165 VQQCFEELVLKILDTPSLL 183
VQ FEELV+KIL TP+LL
Sbjct: 197 VQHAFEELVIKILQTPNLL 215
>gi|448081057|ref|XP_004194794.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359376216|emb|CCE86798.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 116/170 (68%), Gaps = 3/170 (1%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAI 66
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
GNK D ++VV FA F+E SA + NV+Q F + +I
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|401424329|ref|XP_003876650.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492893|emb|CBZ28172.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 200
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 131/202 (64%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ +++ K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD T ++F N+ W EI+ Y++ ++ K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVK-TWLSEIEKYAS-ENVNKILVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV + +FA G F+E SAK NV++ F ++ I ++ E
Sbjct: 122 KCDLVTKKVVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKARLAVSGEAKS 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ N+ Q PP A S CC
Sbjct: 182 VTRPNL--QNPPTAKKDDS-CC 200
>gi|168028754|ref|XP_001766892.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681871|gb|EDQ68294.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 121/167 (72%), Gaps = 4/167 (2%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLK 63
S S+ ++DYL KLL+IGDSGVGKS LLL F+ D+F TIG+DFK++ +++ GK++K
Sbjct: 6 SRSRADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIK 65
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K
Sbjct: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNK 123
Query: 124 LLVGNKVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
+LVGNK D ES+R V +G A EYG F E SAKT +NV+ F
Sbjct: 124 ILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNMNVEDVF 170
>gi|350534422|ref|NP_001234140.1| ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
gi|5669640|gb|AAD46405.1|AF096249_1 ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
Length = 216
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 132/209 (63%), Gaps = 13/209 (6%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ + TIG+DFK++ +++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSLTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
K D ES+R V +G A EYG F E SAKT +NV+Q F + D LA+
Sbjct: 129 KADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIA---RDIKQRLADTD 185
Query: 188 KGLKKNIFKQKPPEADAAA------SGCC 210
+ + K PEA A S CC
Sbjct: 186 SKAEPSTLKINQPEAGAGGSQTSQKSACC 214
>gi|338725027|ref|XP_003365067.1| PREDICTED: ras-related protein Rab-13-like [Equus caballus]
Length = 203
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 119/170 (70%), Gaps = 3/170 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
NK D E++R V K++ ARE+G F E SAK+ +NV + F L IL
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 170
>gi|83595175|gb|ABC25044.1| RAS related GTP-binding protein RAB10 [Hydra vulgaris]
Length = 203
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 130/205 (63%), Gaps = 6/205 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +DYLFKLL+IGDSGVGK+ LL F+ D F TIG+DFK+K V+V GKK+KL
Sbjct: 2 AKKAYDYLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVEVDGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T+ TF N++ W + ID +++ + +++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAK-WLRNIDEHAS-EGVERMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D +R+ +K++G ARE+ F E SAK + V++ F L IL A
Sbjct: 120 LGNKCDMNDKRMASKEKGEGIAREHNIKFYETSAKDNICVEEAFMRLTQDILRKHQAGAT 179
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
+ + P E A + CC
Sbjct: 180 QDQATTGVVI---PKENRAKPANCC 201
>gi|414587082|tpg|DAA37653.1| TPA: ypt-like protein isoform 1 [Zea mays]
gi|414587083|tpg|DAA37654.1| TPA: ypt-like protein isoform 2 [Zea mays]
Length = 208
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 110/161 (68%), Gaps = 3/161 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
EFDYLFKLL+IGDS VGKS LL F D++ + TIGVDFK++ V+V GK +KL IWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD+T ++F N+ W EID Y+ N KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLDEIDRYA-NDSVRKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
K D R V +A E G F+E SAK +NV++ F
Sbjct: 122 KCDLAENRAVDTSVAQAYAEEVGIPFLETSAKESINVEEAF 162
>gi|403372916|gb|EJY86368.1| Rab A61 [Oxytricha trifallax]
Length = 248
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 113/159 (71%), Gaps = 3/159 (1%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IG+SGVGKS LLL + ++F E TIGVDFK+K + + + +KL IWDTA
Sbjct: 30 DYLFKLLLIGNSGVGKSCLLLRYAENSFNENFFNTIGVDFKIKTIMLDEQIVKLQIWDTA 89
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRTLTSSYYRGA GII+VYDVT RD+F N+ W EI+ ++ C K+LVGNK
Sbjct: 90 GQERFRTLTSSYYRGAHGIIIVYDVTDRDSFENVRQ-WMHEIERFANAGVC-KILVGNKC 147
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D E R V+ +EG+ A+ Y F+E SAK +NV+ F
Sbjct: 148 DMEESRKVSHEEGMELAKHYEIPFLETSAKNSINVETSF 186
>gi|241948557|ref|XP_002417001.1| RAB-family small GTP-binding protein, putative; YPT1-like RAB
GTPase, putative; transport GTPase, putative [Candida
dubliniensis CD36]
gi|223640339|emb|CAX44589.1| RAB-family small GTP-binding protein, putative [Candida
dubliniensis CD36]
Length = 207
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 116/170 (68%), Gaps = 3/170 (1%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAI 66
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
GNK D +++V FA F+E SA + NV+Q F + +I
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|241999568|ref|XP_002434427.1| RAS-related protein, putative [Ixodes scapularis]
gi|215497757|gb|EEC07251.1| RAS-related protein, putative [Ixodes scapularis]
gi|442750147|gb|JAA67233.1| Putative gtpase rab2 small g protein superfamily [Ixodes ricinus]
Length = 212
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAF 160
>gi|357125787|ref|XP_003564571.1| PREDICTED: ras-related protein RABE1a-like [Brachypodium
distachyon]
Length = 216
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 135/208 (64%), Gaps = 12/208 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL IWD
Sbjct: 12 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 71
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+L+GN
Sbjct: 72 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKVLIGN 129
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG- 186
K D ES+R V+ +G A EYG F E SAKT +NV+Q F + D LAE
Sbjct: 130 KADMDESKRAVSTAQGQALADEYGIKFFETSAKTNLNVEQVFFSIA---RDIKQRLAETD 186
Query: 187 ----SKGLKKNIFKQKPPEADAAASGCC 210
+ +K N Q + ++ S CC
Sbjct: 187 SKPEDQTIKINKTGQGSEDPESQKSACC 214
>gi|260834761|ref|XP_002612378.1| hypothetical protein BRAFLDRAFT_58617 [Branchiostoma floridae]
gi|229297755|gb|EEN68387.1| hypothetical protein BRAFLDRAFT_58617 [Branchiostoma floridae]
Length = 214
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAF 160
>gi|169784109|ref|XP_001826516.1| GTP-binding protein ypt2 [Aspergillus oryzae RIB40]
gi|83775261|dbj|BAE65383.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868528|gb|EIT77742.1| GTP-binding protein [Aspergillus oryzae 3.042]
Length = 206
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 135/209 (64%), Gaps = 8/209 (3%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A + +D+L KLL+IGDSGVGKS LL F+ D+F TIG+DFK++ +++ GK++KL
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKL 61
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W ++ +++ + K+
Sbjct: 62 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIR-TWFSNVEQHAS-EGVHKI 119
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTPS 181
L+GNK D E +R V+ ++G A E G F+E SAK +N+++ F L +I +DT
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEIKKGMDTSK 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
GS+G+ +I +Q P + CC
Sbjct: 180 SEQPGSQGV--SIDQQGPGPNGSTGGKCC 206
>gi|270013048|gb|EFA09496.1| hypothetical protein TcasGA2_TC010990 [Tribolium castaneum]
Length = 297
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 132/207 (63%), Gaps = 11/207 (5%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A+ Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K++KL
Sbjct: 90 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKL 149
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F ++ D W +I YS + + +
Sbjct: 150 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD-WVTQIKTYSWDNAQV-I 207
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERV++ + G A + G F E SAK +NV+ FE LV I L
Sbjct: 208 LVGNKCDMEDERVISFERGKQLAEQLGVEFFETSAKENINVKAVFERLVDIICDKMSDSL 267
Query: 178 DT-PSLLAEGSKGLKKNIFKQKPPEAD 203
DT P+L++ G+KG + Q P A+
Sbjct: 268 DTDPTLMSGGAKGQRLTDAPQGPQAAN 294
>gi|449530081|ref|XP_004172025.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 191
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 114/166 (68%), Gaps = 3/166 (1%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFK++ V++ GK +KL IWDTA
Sbjct: 10 DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 69
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVGNK
Sbjct: 70 GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGNKC 127
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
D +VV + FA E G F+E SAK NV+Q F + +I
Sbjct: 128 DLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEI 173
>gi|326490445|dbj|BAJ84886.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326491645|dbj|BAJ94300.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 134/207 (64%), Gaps = 11/207 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ V++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W K I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIKNIEQHASD-NVSKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG- 186
K D ES+R V +G A EYG F E SAKT +NV+Q F + D L+E
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIQFFETSAKTNMNVEQVFFSIA---RDIKQRLSEAD 185
Query: 187 SKGLKKNIFKQKPPEADAAA---SGCC 210
SK I +A AAA S CC
Sbjct: 186 SKPEGGTIKINTEGDASAAAGQKSACC 212
>gi|170592447|ref|XP_001900976.1| Rab family protein 8 [Brugia malayi]
gi|158591043|gb|EDP29656.1| Rab family protein 8, putative [Brugia malayi]
Length = 237
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/169 (47%), Positives = 121/169 (71%), Gaps = 3/169 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIW 67
+ +DYLFKLL+IGDSGVGK+ +L F+ D+F TIG+DFK++ +++ GKK+KL IW
Sbjct: 3 KSYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVDRMIIG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
NK D E R V+++ G A EYG F+E SAK +NV++ F L I
Sbjct: 121 NKCDIEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDI 169
>gi|334322507|ref|XP_003340260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-13-like
[Monodelphis domestica]
Length = 201
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 126/196 (64%), Gaps = 11/196 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIXGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D E +R V K++ ARE+G F E SAK+ +NV + F L I LL G
Sbjct: 121 NKCDMEVKRKVQKEQAEKLAREHGIRFFETSAKSSLNVDEAFNSLARDI-----LLKSGR 175
Query: 188 KGLKKNIFKQKPPEAD 203
+ N + PP D
Sbjct: 176 RSGNSN---KAPPTTD 188
>gi|124506197|ref|XP_001351696.1| PfRab1a [Plasmodium falciparum 3D7]
gi|6525224|gb|AAF15358.1|AF201953_1 Rab1 protein [Plasmodium falciparum]
gi|23504624|emb|CAD51503.1| PfRab1a [Plasmodium falciparum 3D7]
Length = 207
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 130/203 (64%), Gaps = 5/203 (2%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
+++DYL+K+++IGDSGVGKS +LL F+ D+F E TIGVDF+ + + V K +KL IW
Sbjct: 7 RDYDYLYKIILIGDSGVGKSCILLRFSDDHFTESYITTIGVDFRFRTIKVDDKIVKLQIW 66
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TS+YYRGA GII++YD T R++F +++D W EI+ Y TN+D KLLVG
Sbjct: 67 DTAGQERFRTITSAYYRGADGIIIIYDTTDRNSFLHIND-WMNEINKY-TNEDTCKLLVG 124
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D + + +T EG N A+E FIE SAK NV+ F + +++ +
Sbjct: 125 NKADCKDDIEITTMEGQNKAKELNISFIETSAKDATNVELAFTMITQELI--KKKKKKNF 182
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
LK N K K D + C
Sbjct: 183 TSLKNNHAKLKLSTHDNSPQSFC 205
>gi|328866656|gb|EGG15039.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 202
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 129/202 (63%), Gaps = 4/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++ YLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT R TF N+ W +EID ++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRVTFDNVRQ-WLQEIDRFAC-ESVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA F+E SAK NV+Q F + +I + + ++ ++
Sbjct: 122 KSDLVAKKVVDYNTAKAFADLLQIPFLETSAKQSTNVEQAFMTMATEIKNRLT-ASQPTQ 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ +N + A SGCC
Sbjct: 181 TVDRNKVVPGTSQPIQAKSGCC 202
>gi|322709841|gb|EFZ01416.1| small GTP-binding protein YPTI [Metarhizium anisopliae ARSEF 23]
Length = 248
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 114/168 (67%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 50 RYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 109
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 110 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 167
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 168 KSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 215
>gi|255549670|ref|XP_002515886.1| protein with unknown function [Ricinus communis]
gi|223544791|gb|EEF46306.1| protein with unknown function [Ricinus communis]
Length = 219
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 117/166 (70%), Gaps = 3/166 (1%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWDTA
Sbjct: 22 DYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 81
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRT+TSSYYRGA GII+V+DVT ++F N+ W EID ++T+ + KLLVGNK
Sbjct: 82 GQERFRTITSSYYRGAHGIIIVFDVTDEESFRNVKG-WLTEIDKFATD-NINKLLVGNKC 139
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
D ++RVV+ + FA E G F+E SAK NV+ F + +I
Sbjct: 140 DVTNKRVVSNETAKAFADEIGIPFLETSAKNATNVEDAFMTMAAEI 185
>gi|74833846|emb|CAI39376.1| rab_A02 [Paramecium tetraurelia]
Length = 201
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 133/203 (65%), Gaps = 5/203 (2%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIW 67
+E+DYLFKL+++G+SGVGKSSLLL F+ D F + TIGVDF+ K +++ GKK+KL IW
Sbjct: 3 KEYDYLFKLVIVGNSGVGKSSLLLRFSDDTFSDSYLTTIGVDFRFKTLEIDGKKVKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TS+YY+GA GI++VYDV+ TF ++ W E+D Y+ ++ LL+G
Sbjct: 63 DTAGQERFRTITSAYYKGADGIVLVYDVSSLATFEDIDKFWINEVDSYA-EKNVELLLLG 121
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D E E+VVT ++ +++A +E SAKT V + F L K++ ++GS
Sbjct: 122 NKSDIE-EKVVTTQKALDYAGIRKMAHMEVSAKTADQVSKAFLSLARKLIAKKD--SQGS 178
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
KG +Q P + GCC
Sbjct: 179 KGSGPQKTQQTPGQKIGQQKGCC 201
>gi|448085540|ref|XP_004195885.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359377307|emb|CCE85690.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 116/170 (68%), Gaps = 3/170 (1%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAI 66
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
GNK D ++VV FA F+E SA + NV+Q F + +I
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|388510710|gb|AFK43421.1| unknown [Lotus japonicus]
Length = 212
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 132/205 (64%), Gaps = 9/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
K D ES+R V +G A EYG F E SAKT +NV++ F + D LA+
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA---RDIKQRLADTD 185
Query: 188 KGLKKNIFKQKPPEADAAASG--CC 210
+ K P+ AAA CC
Sbjct: 186 SKAEPQTIKINQPDQPAAAQNFTCC 210
>gi|254570669|ref|XP_002492444.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032242|emb|CAY70249.1| hypothetical protein PAS_chr3_1167 [Komagataella pastoris GS115]
gi|328353543|emb|CCA39941.1| Ras-related protein Rab-1A [Komagataella pastoris CBS 7435]
Length = 203
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 127/202 (62%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + ++ TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N++ W +EID Y+T +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVNQ-WLQEIDRYATG-GVMKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + ++VV FA IE SA NV+Q F + +I GS
Sbjct: 122 KSDLKDKKVVDYTVAKEFADALEIPLIETSALDSTNVEQAFFNMARQIKSQMVNNQAGSG 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K +I + + S CC
Sbjct: 182 TEKASINLRGQSVGGSQNSSCC 203
>gi|324528770|gb|ADY48949.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 201
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 131/205 (63%), Gaps = 6/205 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++++D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 2 AKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID +++ +D K+L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVEKML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D RVV+++ G A ++G F+E SAK + + + F +L ILD +
Sbjct: 120 LGNKCDMADRRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDK---MPN 176
Query: 186 GSKGLKKNIFKQKPPEADAAASGCC 210
+ K+ + A GCC
Sbjct: 177 KEENAKQPTIRPVDSGASTGRVGCC 201
>gi|550062|gb|AAA60241.1| GTP-binding protein [Homo sapiens]
Length = 212
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLMFMETSAKTASNVEEAF 160
>gi|344234197|gb|EGV66067.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 205
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D ++VV FA F+E SA + NV+Q F + +I
Sbjct: 122 KADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|311254230|ref|XP_001927266.2| PREDICTED: ras-related protein Rab-13 [Sus scrofa]
Length = 203
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 119/170 (70%), Gaps = 3/170 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
NK D E++R V K++ ARE+G F E SAK+ +NV + F L IL
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 170
>gi|154416464|ref|XP_001581254.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736312|gb|AAX97485.1| small Rab GTPase RabX8 [Trichomonas vaginalis]
gi|121915480|gb|EAY20268.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 207
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 133/206 (64%), Gaps = 11/206 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
++D+ FK++++GDSGVGK++++ + + F E PTIGV+F+ KY+++ KK+KLAIWDT
Sbjct: 7 DYDFQFKIILLGDSGVGKTAIITRYCKELFHEQDPTIGVNFQQKYIEINNKKIKLAIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE+FRT+T +YR G I+VYD+T + + +L +W E++ T+ DC L+VGNK
Sbjct: 67 AGQEKFRTITRQFYRKVDGAILVYDLTDKKSLEDLESLWIPELNSNVTS-DCQMLIVGNK 125
Query: 130 VD-KE----SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
D KE +++VTK+E N AR++ LF+E SAK+ VQQ FEELV ++++ P
Sbjct: 126 CDLKEDPEYKDKIVTKEEAENVARKHATLFVESSAKSNEGVQQAFEELVTRLVEKPRTHE 185
Query: 185 EGSKGLKKNIFKQKPPEADAAASGCC 210
E + Q P+ + CC
Sbjct: 186 EDAAET-----VQIDPKNSPSQGWCC 206
>gi|388581092|gb|EIM21402.1| GTP-binding protein ypt1 [Wallemia sebi CBS 633.66]
Length = 205
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 127/203 (62%), Gaps = 4/203 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++D+LFKLL+IGDSGVGKS LLL F D + TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 DYDFLFKLLLIGDSGVGKSCLLLRFADDTYTSSYISTIGVDFKIRTIEIDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F ++S W +EID Y+ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDNESFDHVSQ-WLQEIDRYAC-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS- 187
K D ES++ V FA + F+E SAK NV+Q F + I D + GS
Sbjct: 122 KNDLESKKSVEFNVAKEFAEQLNIPFLETSAKDSTNVEQAFLTMAKHIKDRMGTNSVGSG 181
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
G K + + D SG C
Sbjct: 182 AGTKSGVKLSSGQQLDQQTSGGC 204
>gi|345306838|ref|XP_001513461.2| PREDICTED: ras-related protein Rab-2A-like [Ornithorhynchus
anatinus]
Length = 212
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|343962013|dbj|BAK62594.1| ras-related protein Rab-10 [Pan troglodytes]
Length = 200
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 123/176 (69%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D + +RVV +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMDDKRVVPTGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|4585808|emb|CAB40900.1| putative Rab1A protein [Plasmodium falciparum]
Length = 207
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 130/203 (64%), Gaps = 5/203 (2%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
+++DYL+K+++IGDSGVGKS +LL F+ D+F E TIGVDF+ + + V K +KL IW
Sbjct: 7 RDYDYLYKIILIGDSGVGKSCILLRFSDDHFTESYITTIGVDFRFRTIKVDDKIVKLQIW 66
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TS+YYRGA GII++YD T R++F +++D W EI+ Y TN+D KLLVG
Sbjct: 67 DTAGQERFRTITSAYYRGADGIIIIYDTTDRNSFLHIND-WMNEINKY-TNEDTCKLLVG 124
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D + + +T EG N A+E FIE SAK NV+ F + +++ +
Sbjct: 125 NKADCKDDIEITTMEGQNKAKELNISFIETSAKDATNVELAFTMITQELI--KKKKKKNF 182
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
LK N K K D + C
Sbjct: 183 TSLKNNHAKLKLSTHDNSPQSFC 205
>gi|363748678|ref|XP_003644557.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888189|gb|AET37740.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
Length = 204
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 130/204 (63%), Gaps = 6/204 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK+K V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y T +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVK-TWLQEIDRYGT-AGVVKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE--G 186
K D + ++VV + FA +E SA NV++ F + +I +T S + G
Sbjct: 122 KNDLKDKKVVDFEVAKEFADSLSIPVLETSALDSSNVEEAFLTMARQIKETMSHQQKDTG 181
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
K K + K ++SGCC
Sbjct: 182 KKDDKSGV-NLKGQSLTGSSSGCC 204
>gi|356520774|ref|XP_003529035.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABD2a-like
[Glycine max]
Length = 203
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 125/202 (61%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYLFKLL+IGDSGVGKS LLL F+ D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 KYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEKDGKTIKLXIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYR A GII+VYDV D F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYREAHGIIIVYDVIDEDRFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D + RVV+ FA + G F+E SAK NV+ F + I + + ++ S
Sbjct: 122 KSDMTTNRVVSYDTAKEFADQIGIPFMETSAKDATNVEDAFMAMSTAIKN--RMASQPSA 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K + SGCC
Sbjct: 180 NNAKPPIVHIKGQPVGPKSGCC 201
>gi|147901693|ref|NP_001088531.1| RAB3A, member RAS oncogene family [Xenopus laevis]
gi|54311426|gb|AAH84880.1| Rab3a-prov protein [Xenopus laevis]
Length = 220
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 127/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLAEHLGFEFFEASAKDNINVKQTFERLVDIICEKMSESL 191
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + + PP D A
Sbjct: 192 DTADPAVTGAKQGPQLTDQGAPPHQDCA 219
>gi|73535753|pdb|1Z0A|A Chain A, Gdp-Bound Rab2a Gtpase
gi|73535754|pdb|1Z0A|B Chain B, Gdp-Bound Rab2a Gtpase
gi|73535755|pdb|1Z0A|C Chain C, Gdp-Bound Rab2a Gtpase
gi|73535756|pdb|1Z0A|D Chain D, Gdp-Bound Rab2a Gtpase
Length = 174
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 7 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 67 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 124
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 125 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 164
>gi|10946940|ref|NP_067493.1| ras-related protein Rab-2A [Mus musculus]
gi|1709998|sp|P53994.1|RAB2A_MOUSE RecName: Full=Ras-related protein Rab-2A
gi|1177547|emb|CAA64684.1| GTP-binding protein [Mus musculus]
gi|26347751|dbj|BAC37524.1| unnamed protein product [Mus musculus]
gi|74137386|dbj|BAE35742.1| unnamed protein product [Mus musculus]
gi|74183144|dbj|BAE22525.1| unnamed protein product [Mus musculus]
gi|74194509|dbj|BAE37298.1| unnamed protein product [Mus musculus]
gi|74198093|dbj|BAE35226.1| unnamed protein product [Mus musculus]
gi|74211806|dbj|BAE29254.1| unnamed protein product [Mus musculus]
gi|74222313|dbj|BAE26957.1| unnamed protein product [Mus musculus]
gi|112292939|dbj|BAF02847.1| Rab2A [Mus musculus]
gi|148673733|gb|EDL05680.1| RAB2, member RAS oncogene family [Mus musculus]
Length = 212
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|347830671|emb|CCD46368.1| similar to ras-related protein ypt1 [Botryotinia fuckeliana]
Length = 226
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 92/169 (54%), Positives = 114/169 (67%), Gaps = 3/169 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IW
Sbjct: 28 NRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIW 87
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVG
Sbjct: 88 DTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVG 145
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
NK D ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 146 NKSDMSDKKVVDYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 194
>gi|26335369|dbj|BAC31385.1| unnamed protein product [Mus musculus]
Length = 168
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|351709745|gb|EHB12664.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 122/176 (69%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFSTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLGNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D + +RVV K +G ARE+G F E SAK N+++ F L IL TP
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANTNIEKAFLTLAQDILRKTP 175
>gi|225714638|gb|ACO13165.1| Ras-related protein Rab-2 [Lepeophtheirus salmonis]
gi|290562553|gb|ADD38672.1| Ras-related protein Rab-2 [Lepeophtheirus salmonis]
Length = 212
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 121/169 (71%), Gaps = 3/169 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + +++ GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
D E++R V ++EG FARE+G +F+E SAKT NV++ F +I D
Sbjct: 121 SDLEAKRDVKREEGEAFAREHGLIFMETSAKTAANVEEAFINTAREIYD 169
>gi|225713134|gb|ACO12413.1| Ras-related protein Rab-2 [Lepeophtheirus salmonis]
Length = 212
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 121/169 (71%), Gaps = 3/169 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + +++ GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
D E++R V ++EG FARE+G +F+E SAKT NV++ F +I D
Sbjct: 121 SDLEAKRDVKREEGEAFAREHGLIFMETSAKTAANVEEAFINTAREIYD 169
>gi|4506365|ref|NP_002856.1| ras-related protein Rab-2A isoform a [Homo sapiens]
gi|50979323|ref|NP_001003318.1| ras-related protein Rab-2A [Canis lupus familiaris]
gi|197098732|ref|NP_001126581.1| ras-related protein Rab-2A [Pongo abelii]
gi|302564413|ref|NP_001180789.1| ras-related protein Rab-2A [Macaca mulatta]
gi|350535689|ref|NP_001233386.1| ras-related protein Rab-2A [Pan troglodytes]
gi|296226560|ref|XP_002758983.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Callithrix
jacchus]
gi|301759885|ref|XP_002915755.1| PREDICTED: ras-related protein Rab-2A-like [Ailuropoda melanoleuca]
gi|332213898|ref|XP_003256067.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Nomascus
leucogenys]
gi|390475645|ref|XP_003734991.1| PREDICTED: ras-related protein Rab-2A isoform 2 [Callithrix
jacchus]
gi|402878329|ref|XP_003902845.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Papio anubis]
gi|403288788|ref|XP_003935569.1| PREDICTED: ras-related protein Rab-2A [Saimiri boliviensis
boliviensis]
gi|46577636|sp|P61019.1|RAB2A_HUMAN RecName: Full=Ras-related protein Rab-2A
gi|46577642|sp|P61105.1|RAB2A_CANFA RecName: Full=Ras-related protein Rab-2A
gi|75070519|sp|Q5R6B6.1|RAB2A_PONAB RecName: Full=Ras-related protein Rab-2A
gi|75075847|sp|Q4R4X6.1|RAB2A_MACFA RecName: Full=Ras-related protein Rab-2A
gi|20379036|gb|AAM21078.1|AF498930_1 small GTP binding protein RAB2A [Homo sapiens]
gi|35837|emb|CAA31411.1| unnamed protein product [Homo sapiens]
gi|164054|gb|AAA30888.1| GTP-binding protein (rab2) [Canis lupus familiaris]
gi|14286264|gb|AAH08929.1| RAB2A, member RAS oncogene family [Homo sapiens]
gi|54696258|gb|AAV38501.1| RAB2, member RAS oncogene family [Homo sapiens]
gi|55731983|emb|CAH92700.1| hypothetical protein [Pongo abelii]
gi|61358667|gb|AAX41604.1| RAB2 member RAS oncogene family [synthetic construct]
gi|67970120|dbj|BAE01404.1| unnamed protein product [Macaca fascicularis]
gi|67971014|dbj|BAE01849.1| unnamed protein product [Macaca fascicularis]
gi|119607233|gb|EAW86827.1| RAB2, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119607234|gb|EAW86828.1| RAB2, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|189065426|dbj|BAG35265.1| unnamed protein product [Homo sapiens]
gi|261860492|dbj|BAI46768.1| RAB2A, member RAS oncogene family [synthetic construct]
gi|312151824|gb|ADQ32424.1| RAB2A, member RAS oncogene family [synthetic construct]
gi|335773365|gb|AEH58368.1| Ras-related protein Rab-2A-like protein [Equus caballus]
gi|343960663|dbj|BAK61921.1| ras-related protein Rab-2A [Pan troglodytes]
gi|380783321|gb|AFE63536.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|383408523|gb|AFH27475.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|384948552|gb|AFI37881.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|410218884|gb|JAA06661.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410260538|gb|JAA18235.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410305644|gb|JAA31422.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410355261|gb|JAA44234.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|417397207|gb|JAA45637.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|311253799|ref|XP_001926739.2| PREDICTED: ras-related protein Rab-2A [Sus scrofa]
gi|385281364|gb|AFI57834.1| ras-related protein Rab-2A [Capra hircus]
Length = 212
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|1448941|gb|AAB04618.1| ypt-related protein [Brassica rapa subsp. campestris]
Length = 206
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 122/204 (59%), Gaps = 4/204 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
E+DYLFKLL+IGDS VGKS LLL F D + + TIGVDFK++ ++ GK +KL IW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GII+VYD T ++F N+ W EID Y+ + C KLL+G
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQ-WLSEIDRYANDSVC-KLLIG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D +VV+ + G A E G F+E SAK NV+Q F + +I +
Sbjct: 121 NKNDMVESKVVSTETGKALADELGIPFLETSAKDSTNVEQAFLTIAGEIKKKMGSHTNAN 180
Query: 188 KGLKKNIFKQK-PPEADAAASGCC 210
K + K P GCC
Sbjct: 181 KTSGSGTVQMKGQPIQQNNGGGCC 204
>gi|225709940|gb|ACO10816.1| Ras-related protein Rab-2 [Caligus rogercresseyi]
Length = 212
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 121/169 (71%), Gaps = 3/169 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + +++ GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
D E++R V ++EG FARE+G +F+E SAKT NV++ F +I D
Sbjct: 121 SDLEAKRDVKREEGEAFAREHGLIFMETSAKTAANVEEAFINTAREIYD 169
>gi|225554649|gb|EEH02945.1| GTP-binding protein ypt1 [Ajellomyces capsulatus G186AR]
gi|325094932|gb|EGC48242.1| GTP-binding protein ypt1 [Ajellomyces capsulatus H88]
Length = 205
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDT
Sbjct: 9 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 68
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGNK
Sbjct: 69 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 126
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
D E ++ V FA G F+E SAK+ NV+Q F + +I
Sbjct: 127 SDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 173
>gi|388521973|gb|AFK49048.1| unknown [Lotus japonicus]
Length = 212
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 133/205 (64%), Gaps = 9/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ G+++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGERIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
K D ES+R V +G A EYG F E SAKT +NV++ F + D LA+
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA---RDIKQRLADTD 185
Query: 188 KGLKKNIFKQKPPEADAAA--SGCC 210
+ K P+ AAA S CC
Sbjct: 186 SKAEPQTIKINQPDQPAAAQNSTCC 210
>gi|41393075|ref|NP_958862.1| ras-related protein Rab-2A [Danio rerio]
gi|27881912|gb|AAH44459.1| RAB2A, member RAS oncogene family [Danio rerio]
gi|182891762|gb|AAI65141.1| Rab2a protein [Danio rerio]
Length = 212
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|387017930|gb|AFJ51083.1| ras-related protein Rab-1A-like [Crotalus adamanteus]
Length = 201
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 128/204 (62%), Gaps = 9/204 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EI+ Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQ-WLQEIERYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLLAEG 186
K D +++VV FA F+E SAK NV+Q F + +I P A G
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLSIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGG 181
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
+ N+ P GCC
Sbjct: 182 D---RPNLKIDSTP-VKQGGGGCC 201
>gi|126134463|ref|XP_001383756.1| GTP-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
gi|126095905|gb|ABN65727.1| GTP-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
Length = 208
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D +++V FA F+E SA + NV+Q F + +I
Sbjct: 122 KADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|156119376|ref|NP_001095172.1| ras-related protein Rab-2A [Oryctolagus cuniculus]
gi|266878|sp|Q01971.1|RAB2A_RABIT RecName: Full=Ras-related protein Rab-2A
gi|1696|emb|CAA48208.1| tubulovesicle-membrane-associated GTP-binding protein [Oryctolagus
cuniculus]
Length = 212
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|1370198|emb|CAA98176.1| RAB8E [Lotus japonicus]
Length = 215
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 135/207 (65%), Gaps = 9/207 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN-WIHNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLL 183
K D ES+R V +G A EYG F E SAKT +NV++ F ++ ++ DT S
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSSK 188
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
E + G+K N + A S CC
Sbjct: 189 TEPT-GIKINPQDKGSAGEAAQKSACC 214
>gi|68468983|ref|XP_721550.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|68469532|ref|XP_721279.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|15077428|gb|AAK83158.1|AF330211_1 small GTP-binding protein Ypt1p [Candida albicans]
gi|46443188|gb|EAL02472.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|46443470|gb|EAL02752.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|238879175|gb|EEQ42813.1| GTP-binding protein YPT1 [Candida albicans WO-1]
Length = 207
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 116/170 (68%), Gaps = 3/170 (1%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAI 66
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK++ +++ GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
GNK D +++V FA F+E SA + NV+Q F + +I
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|41152205|ref|NP_958486.1| ras-related protein Rab-13 [Danio rerio]
gi|31419201|gb|AAH53195.1| RAB13, member RAS oncogene family [Danio rerio]
Length = 200
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 122/170 (71%), Gaps = 3/170 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+++D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFKVK ++V GKK+KL +W
Sbjct: 3 KKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T ++ N+ + W K I + + ++L+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQN-WMKSIK-ENASAGVSRMLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
NK D E++R V+K+ G A+E+G F E SAK+ +NV++ F L IL
Sbjct: 121 NKCDIEAKRKVSKETGEKLAKEHGIRFFETSAKSSINVEESFTSLARDIL 170
>gi|356563372|ref|XP_003549938.1| PREDICTED: GTP-binding protein YPTM2-like isoform 2 [Glycine max]
Length = 215
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 133/221 (60%), Gaps = 31/221 (14%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVV---TKKEGIN----------FAREYGCLFIECSAKTRVNVQQCFEELVLK 175
K D + +VV T K +N FA E G F+E SAK NV+Q F + +
Sbjct: 122 KCDLTANKVVSSETAKVILNFVVLFLLTSAFADEIGIPFMETSAKNATNVEQAFMAMAAE 181
Query: 176 ILDTPSLLAEGSKGLKKNIFKQKPPEADAAA------SGCC 210
I ++ + + +PP +GCC
Sbjct: 182 I---------KNRMASQPVNNARPPTVQIRGQPVNQKAGCC 213
>gi|357440489|ref|XP_003590522.1| Ras-like protein [Medicago truncatula]
gi|355479570|gb|AES60773.1| Ras-like protein [Medicago truncatula]
gi|388512621|gb|AFK44372.1| unknown [Medicago truncatula]
Length = 216
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 133/212 (62%), Gaps = 13/212 (6%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLA 65
++ ++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+L
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN-WIRNIEQHASD-NVNKIL 125
Query: 126 VGNKVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
VGNK D ES+R V +G A EYG F E SAKT +NV + F + D LA
Sbjct: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDEVFFSIA---RDIKQRLA 182
Query: 185 EGSKGLKKNIFKQKPPEADAAA------SGCC 210
E + K P+ A + S CC
Sbjct: 183 ESDSKTEPQTLKINQPDQGAGSAQASQTSSCC 214
>gi|45382561|ref|NP_990559.1| ras-related protein Rab-2A [Gallus gallus]
gi|224046295|ref|XP_002198446.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Taeniopygia
guttata]
gi|82245348|sp|Q90965.1|RAB2A_CHICK RecName: Full=Ras-related protein Rab-2A
gi|664925|emb|CAA59004.1| GTP-binding protein [Gallus gallus]
gi|387017962|gb|AFJ51099.1| RAB2, member RAS oncogene family [Crotalus adamanteus]
Length = 212
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|34849826|gb|AAH58382.1| RAB2A, member RAS oncogene family [Mus musculus]
Length = 212
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEKAF 160
>gi|7689363|gb|AAF67748.1| GTP-binding protein RAB3A [Homo sapiens]
Length = 220
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + KK+KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKKIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEEL-------VLKIL 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE L + + L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLEDVICEKMSESL 191
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 192 DTADPAVTGAKQGPQLSDQQVPPHQDCA 219
>gi|229596300|ref|XP_001011511.3| Ras family protein [Tetrahymena thermophila]
gi|225565488|gb|EAR91266.3| Ras family protein [Tetrahymena thermophila SB210]
gi|307777758|dbj|BAJ21275.1| Rab-family small GTPase Rab1B [Tetrahymena thermophila]
Length = 212
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 133/207 (64%), Gaps = 10/207 (4%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
QE+D+LFKL++IG+SGVGKS +L+ + + F + TIGVDFK+K +++ GK++KL IW
Sbjct: 11 QEYDHLFKLVLIGNSGVGKSCMLMRYAENTFTQNFYNTIGVDFKIKTINLQGKQIKLQIW 70
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQ+RF+T+T++YYRGA GI++VYDVT + +F N+ W EI+ Y+ C KLL+G
Sbjct: 71 DTAGQDRFKTITTNYYRGAHGIVVVYDVTDKLSFENVK-TWMSEIEKYAQENVC-KLLIG 128
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFE----ELVLKILDTPSLL 183
NK D +RVV+ +EG A FIE SAK N+ FE +++++I D +
Sbjct: 129 NKSDLSDKRVVSTEEGQQLASSLKIKFIETSAKNSNNIDSAFESMAQDVLIRISDIKTQQ 188
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
+ LK Q E +++ GCC
Sbjct: 189 DNERRRLKPG---QNVSEQKSSSEGCC 212
>gi|145512599|ref|XP_001442216.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831288|emb|CAI39277.1| rab_B67 [Paramecium tetraurelia]
gi|74833789|emb|CAI39358.1| rab_A67 [Paramecium tetraurelia]
gi|124409488|emb|CAK74819.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 140/220 (63%), Gaps = 17/220 (7%)
Query: 1 MDSSSASQQE-FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVG 58
M +S A++++ FD+L K+L+IGDSGVGK+++LL F +NF++ TIG+DFK+K +DV
Sbjct: 1 MATSIANKKDNFDWLIKILLIGDSGVGKTNVLLRFCENNFQQTYLSTIGIDFKIKSIDVE 60
Query: 59 GKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTN 118
GKK+K+ IWDTAGQERF+T+T +YY+GA GII+VY + +D+FTN+S W +I +++
Sbjct: 61 GKKIKMQIWDTAGQERFKTITQTYYKGAMGIILVYSIDDKDSFTNISS-WMNQIKQHASE 119
Query: 119 QDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL- 177
C KLL+GNK+D + R V+K+EG A++YG F E SAK V + F + +
Sbjct: 120 NVC-KLLIGNKIDVPN-RQVSKEEGEALAKQYGVPFFETSAKDGTQVAEAFIAMARAVKA 177
Query: 178 -------DTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
PS G + LK N + + +GCC
Sbjct: 178 NLQNEKSPNPSNPQNGPQQLKPN----NGADEEKKKTGCC 213
>gi|187609396|pdb|3CPH|A Chain A, Crystal Structure Of Sec4 In Complex With Rab-Gdi
Length = 213
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 129/191 (67%), Gaps = 7/191 (3%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGG 59
+ +SS + + +D + K+L+IGDSGVGKS LL+ F D F TIG+DFK+K VD+ G
Sbjct: 7 VSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
KK+KL +WDTAGQERFRT+T++YYRGA GII+VYDVT TFTN+ W K ++ ++ N
Sbjct: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-ND 124
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF---EELVLKI 176
+ LLVGNK D E+ RVVT +G A+E G FIE SAK NV + F +L+ +
Sbjct: 125 EAQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183
Query: 177 LDTPSLLAEGS 187
+D+ L+ G+
Sbjct: 184 IDSNKLVGVGN 194
>gi|378727994|gb|EHY54453.1| GTP-binding protein ypt1 [Exophiala dermatitidis NIH/UT8656]
Length = 208
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWDT
Sbjct: 12 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGNK
Sbjct: 72 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 129
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
D ++VV FA G F+E SAK NV+Q F + +I
Sbjct: 130 SDMADKKVVEYTMAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 176
>gi|313220927|emb|CBY31762.1| unnamed protein product [Oikopleura dioica]
gi|313226508|emb|CBY21653.1| unnamed protein product [Oikopleura dioica]
Length = 216
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 117/174 (67%), Gaps = 3/174 (1%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A+ Q FDY+FKLL+IG+S VGK+S L + D++ T+G+DFKVK V K++KL
Sbjct: 11 ATDQNFDYMFKLLIIGNSAVGKTSFLFRYADDSYTSAFVSTVGIDFKVKTVQRNNKRVKL 70
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T D+F + D WA +I YS + + +
Sbjct: 71 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEDSFNAVQD-WATQIKTYSWDSAKV-M 128
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
LV NK D E+ERVV+ + G AR+ G F E SAK +NV Q F+ LV I D
Sbjct: 129 LVANKADMENERVVSTERGEELARQLGFDFFETSAKENLNVAQSFDRLVDVICD 182
>gi|17737457|ref|NP_523687.1| Rab3 [Drosophila melanogaster]
gi|194884193|ref|XP_001976180.1| GG22724 [Drosophila erecta]
gi|195333207|ref|XP_002033283.1| GM20500 [Drosophila sechellia]
gi|195483658|ref|XP_002090378.1| GE13081 [Drosophila yakuba]
gi|131800|sp|P25228.1|RAB3_DROME RecName: Full=Ras-related protein Rab-3
gi|158193|gb|AAA28843.1| rab3 [Drosophila melanogaster]
gi|7303712|gb|AAF58762.1| Rab3 [Drosophila melanogaster]
gi|16648446|gb|AAL25488.1| LP05860p [Drosophila melanogaster]
gi|40788408|dbj|BAD07037.1| Rab3 [Drosophila melanogaster]
gi|190659367|gb|EDV56580.1| GG22724 [Drosophila erecta]
gi|194125253|gb|EDW47296.1| GM20500 [Drosophila sechellia]
gi|194176479|gb|EDW90090.1| GE13081 [Drosophila yakuba]
gi|220947366|gb|ACL86226.1| Rab3-PA [synthetic construct]
gi|220956828|gb|ACL90957.1| Rab3-PA [synthetic construct]
Length = 220
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 128/207 (61%), Gaps = 11/207 (5%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A+ Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K++KL
Sbjct: 13 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKL 72
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YDVT D+F ++ D W +I YS + + +
Sbjct: 73 QIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQD-WVTQIKTYSWDNAQV-I 130
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT----- 179
LVGNK D E +RV++ + G A + G F E SAK VNV+ FE LV I D
Sbjct: 131 LVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESL 190
Query: 180 ---PSLLAEGSKGLKKNIFKQKPPEAD 203
P+L+ G KG + Q P A+
Sbjct: 191 DADPTLVGGGQKGQRLTDQPQGTPNAN 217
>gi|392876326|gb|AFM86995.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|357613677|gb|EHJ68649.1| ras-related protein Rab-2A [Danaus plexippus]
Length = 212
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAF 160
>gi|213513554|ref|NP_001133505.1| ras-related protein Rab-2A [Salmo salar]
gi|197632081|gb|ACH70764.1| RAB2A, member RAS oncogene family [Salmo salar]
gi|209154270|gb|ACI33367.1| Ras-related protein Rab-2A [Salmo salar]
gi|223647330|gb|ACN10423.1| Ras-related protein Rab-2A [Salmo salar]
gi|223649324|gb|ACN11420.1| Ras-related protein Rab-2A [Salmo salar]
gi|223673215|gb|ACN12789.1| Ras-related protein Rab-2A [Salmo salar]
Length = 212
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|871510|emb|CAA90080.1| small GTP-binding protein [Pisum sativum]
Length = 216
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 133/212 (62%), Gaps = 13/212 (6%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLA 65
++ ++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+L
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN-WIRNIEQHASD-NVNKIL 125
Query: 126 VGNKVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
VGNK D ES+R V +G A EYG F E SAKT +NV + F + D LA
Sbjct: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDEVFFSIA---RDIKQRLA 182
Query: 185 EGSKGLKKNIFKQKPPEADAAA------SGCC 210
E + K P+ A + S CC
Sbjct: 183 ETDSKTEPQTLKINQPDQGAGSAQATQKSACC 214
>gi|71026455|ref|XP_762899.1| small GTP-binding protein Rab1 [Theileria parva strain Muguga]
gi|68349851|gb|EAN30616.1| small GTP-binding protein rab1 [Theileria parva]
Length = 227
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 119/178 (66%), Gaps = 9/178 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTS------DNF--EELSPTIGVDFKVKYVDVGGK 60
+E+DYLFK+++IGDSG GKSSLLL F DN E TIGVDFK+K V +
Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFAVFLFIFIDNTYSESYMSTIGVDFKIKTVKIDNT 61
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
+KL IWDTAGQERFRT+TS+YYRGA GII VYDVT + +F ++++ W ++ID Y+T+
Sbjct: 62 TIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNV 121
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
C KLL+GNK+D RVV+ E + A + +IE SAKT NV++ F + + D
Sbjct: 122 C-KLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKD 178
>gi|225718734|gb|ACO15213.1| Ras-related protein Rab-2 [Caligus clemensi]
Length = 212
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 121/169 (71%), Gaps = 3/169 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIEGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF++L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRDTFSHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
D E++R V ++EG FARE+G +F+E SAKT NV++ F +I D
Sbjct: 121 SDLEAKRDVKREEGEAFAREHGLIFMETSAKTAANVEEAFINTAREIYD 169
>gi|383852954|ref|XP_003701990.1| PREDICTED: ras-related protein Rab-35-like [Megachile rotundata]
Length = 201
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 120/174 (68%), Gaps = 6/174 (3%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIW 67
+E+D+LFKLL+IGDSGVGKSSLLL F + F TIGVDFK++ VD+ G+++KL IW
Sbjct: 3 REYDHLFKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVDIDGERVKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCI-KLLV 126
DTAGQERFRT+TS+YYRG G+I+VYDVT D+F N+ W EI+ N D + ++LV
Sbjct: 63 DTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKR-WLHEIE---QNCDVVNRVLV 118
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
GNK D +E+VV ++ FA + G E SAK +NVQ+ F + ++L T
Sbjct: 119 GNKNDSPNEKVVLTEDAQRFANQMGIQLFETSAKDNINVQEMFMAITRQVLRTK 172
>gi|307176945|gb|EFN66251.1| Ras-related protein Rab-3 [Camponotus floridanus]
Length = 258
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 128/217 (58%), Gaps = 11/217 (5%)
Query: 2 DSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGK 60
D A+ Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K
Sbjct: 44 DGRDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDK 103
Query: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQD 120
++KL IWDTAGQER+RT+T++YYRGA G I++YD+T ++F ++ D W +I YS +
Sbjct: 104 RVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD-WITQIKNYSWDNA 162
Query: 121 CIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT- 179
+ +LVGNK D E ERV++ + G A + G F E SAK +NV+ FE LV I D
Sbjct: 163 QV-ILVGNKCDMEEERVISSERGKQLAEQLGVRFFETSAKENINVKAVFETLVDIICDKM 221
Query: 180 -------PSLLAEGSKGLKKNIFKQKPPEADAAASGC 209
P+L+A G K +P A C
Sbjct: 222 SESLDNDPTLMAGGMGQTKGQRLTDQPTNPANANCNC 258
>gi|298712050|emb|CBJ32986.1| Rab8A, RAB family GTPase [Ectocarpus siliculosus]
Length = 205
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 137/208 (65%), Gaps = 6/208 (2%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLK 63
S ++ FD KLLMIGDSGVGK+ LLL + +D+F + TIG+DFK+K +D+ K++K
Sbjct: 2 SRNESPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+T+SY+RGAQGI++VYDVT + +F ++ + W +I ++ + K
Sbjct: 62 LQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRN-WVAQIQQHA-DVAVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+L+GNK D + +R V+++EG A EYG F E SAK +NV++ F + ++ D L+
Sbjct: 120 ILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKD--RLM 177
Query: 184 AEG-SKGLKKNIFKQKPPEADAAASGCC 210
A+G + G + +A +GCC
Sbjct: 178 ADGPNPGSRAAGNVNLNAQASKKKTGCC 205
>gi|387914838|gb|AFK11028.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|324521795|gb|ADY47928.1| Ras-related protein Rab-8B [Ascaris suum]
Length = 223
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 120/167 (71%), Gaps = 3/167 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYLFKLL+IGDSGVGK+ +L F+ D+F TIG+DFK++ ++V GKK+KL IWDT
Sbjct: 19 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIEVDGKKIKLQIWDT 78
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++GNK
Sbjct: 79 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVDRMIIGNK 136
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
D E R V+++ G A EYG F+E SAK +NV++ F L I
Sbjct: 137 CDVEERRQVSRERGEQLAIEYGTKFLETSAKANINVEEAFFTLARDI 183
>gi|405950969|gb|EKC18921.1| Ras-related protein Rab-2 [Crassostrea gigas]
Length = 211
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 127/186 (68%), Gaps = 7/186 (3%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLAE 185
D E+ R V K+EG FARE+G +F+E SAKT NV++ F +E+ KI D +
Sbjct: 121 SDLEARRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGVFDINN 180
Query: 186 GSKGLK 191
+ G+K
Sbjct: 181 EANGIK 186
>gi|119179533|ref|XP_001241343.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303320893|ref|XP_003070441.1| Ras family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240110137|gb|EER28296.1| Ras family protein [Coccidioides posadasii C735 delta SOWgp]
gi|320033061|gb|EFW15010.1| GTP-binding protein SAS1 [Coccidioides posadasii str. Silveira]
gi|392866739|gb|EAS30086.2| GTP-binding protein ypt2 [Coccidioides immitis RS]
Length = 205
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 133/209 (63%), Gaps = 9/209 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A + +D+L KLL+IGDSGVGKS LL F+ D+F TIG+DFK++ +D+GGK++KL
Sbjct: 2 AGTRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIDLGGKRVKL 61
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W ++ +++ + K+
Sbjct: 62 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFSNVEQHAS-EGVHKM 119
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEEL---VLKILDTPS 181
L+GNK D E +R V+ ++G A E G F+E SAK +NV + F L + K++DT
Sbjct: 120 LIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINVDKAFYTLASEIKKVMDTSK 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
AE S +I Q A+ CC
Sbjct: 180 --AEQSASHNVSI-DQGTGSGTGLANKCC 205
>gi|350417672|ref|XP_003491537.1| PREDICTED: ras-related protein Rab-35-like [Bombus impatiens]
Length = 201
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 120/174 (68%), Gaps = 6/174 (3%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIW 67
+E+D+LFKLL+IGDSGVGKSSLLL F + F TIGVDFK++ VD+ G+++KL IW
Sbjct: 3 REYDHLFKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVDIDGERVKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCI-KLLV 126
DTAGQERFRT+TS+YYRG G+I+VYDVT D+F N+ W EI+ N D + ++LV
Sbjct: 63 DTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKR-WLHEIE---QNCDVVNRVLV 118
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
GNK D +E+VV ++ FA + G E SAK +NVQ+ F + ++L T
Sbjct: 119 GNKNDAPNEKVVLTEDAQRFANQMGIQLFETSAKDNINVQEMFMAITRQVLRTK 172
>gi|403216071|emb|CCK70569.1| hypothetical protein KNAG_0E03100 [Kazachstania naganishii CBS
8797]
Length = 212
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 132/211 (62%), Gaps = 12/211 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IG+SGVGKS LLL F+ D + + TIGVDFK+K V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRG+ GII+VYDVT +D+F + +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFDGVK-MWLQEIDRYATST-VLKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL--LAEG 186
K D +RVV FA F+E SA NV++ F + +I ++ + L G
Sbjct: 122 KCDLNDKRVVEYDVAKEFADANNMPFLETSALDSTNVEEAFLTMARQIKESMAQQKLQNG 181
Query: 187 SKGLKKNIFKQKPPEAD-------AAASGCC 210
+ G N + + +SGCC
Sbjct: 182 ANGQAGNNQQNANKNVNLNGQSLTNQSSGCC 212
>gi|326501920|dbj|BAK06452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 124/192 (64%), Gaps = 11/192 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
EFDYLFKLL+IGDS VGKS LL F D++ + TIGVDFK++ +D+ GK +KL IW
Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTLDMDGKTIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TSSYYRGA GII+VYD+T ++F N+ W EI+ Y+ N KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLSEINKYA-NDSVRKLLVG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D RVV +A E G F+E SAK +NV++ F + I + + GS
Sbjct: 121 NKCDLAESRVVDTAVAQAYADEIGIPFLETSAKESINVEEAFLAMSAAIKKSKA----GS 176
Query: 188 KGLKKNIFKQKP 199
+G + ++KP
Sbjct: 177 QG----VLERKP 184
>gi|195429579|ref|XP_002062835.1| GK19661 [Drosophila willistoni]
gi|194158920|gb|EDW73821.1| GK19661 [Drosophila willistoni]
Length = 220
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 128/207 (61%), Gaps = 11/207 (5%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A+ Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K++KL
Sbjct: 13 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKL 72
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YDVT D+F ++ D W +I YS + + +
Sbjct: 73 QIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQD-WVTQIKTYSWDNAQV-I 130
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT----- 179
LVGNK D E +RV++ + G A + G F E SAK VNV+ FE LV I D
Sbjct: 131 LVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESL 190
Query: 180 ---PSLLAEGSKGLKKNIFKQKPPEAD 203
P+L+ G KG + Q P A+
Sbjct: 191 DADPTLVGGGQKGQRLTDQPQGTPNAN 217
>gi|294885227|ref|XP_002771233.1| Rab1 protein, putative [Perkinsus marinus ATCC 50983]
gi|239874713|gb|EER03049.1| Rab1 protein, putative [Perkinsus marinus ATCC 50983]
Length = 214
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 127/188 (67%), Gaps = 4/188 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLA 65
S +++D+LFKL++IGDSGVGKS LLL F D+F E TIGVDF+ + + V K +KL
Sbjct: 3 SNRDYDHLFKLVLIGDSGVGKSCLLLRFADDSFTESYITTIGVDFRFRTIPVSDKTVKLQ 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRT+TS+YYRGA GI+MVYD T R++F N+ D W E++ Y+ N +K+L
Sbjct: 63 IWDTAGQERFRTITSAYYRGADGIMMVYDCTHRESFENI-DNWLSEVNRYA-NDSTVKIL 120
Query: 126 VGNKVDKESERVVTKKEGINFAREYG-CLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
+GNK D + ++ VT +EG A+ G FI SAK NV++ F + ++DT + A
Sbjct: 121 IGNKSDLKEDQQVTPEEGEQKAKALGFSGFILTSAKDSSNVEKAFSMVSQSLIDTRAAAA 180
Query: 185 EGSKGLKK 192
G G ++
Sbjct: 181 AGQDGSRQ 188
>gi|308321720|gb|ADO28003.1| ras-related protein rab-10 [Ictalurus furcatus]
Length = 200
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 122/176 (69%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GK++KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + I+ ++ N+D K+L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGILLVYDITNAKSFENISK-WLRNIEEHA-NEDVEKML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TP 180
+GNK D E RVV+K +G A E+ F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMEDVRVVSKAKGEQIASEHNIRFFETSAKANINIEKAFLTLAEDILHKTP 175
>gi|18034781|ref|NP_542147.1| GTP-binding protein Rab-3D [Rattus norvegicus]
gi|6093902|sp|Q63942.2|RAB3D_RAT RecName: Full=GTP-binding protein Rab-3D
gi|2253637|gb|AAB81202.1| GTP-binding protein rab3d [Rattus norvegicus]
gi|51859116|gb|AAH81741.1| RAB3D, member RAS oncogene family [Rattus norvegicus]
gi|149020457|gb|EDL78262.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020458|gb|EDL78263.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020459|gb|EDL78264.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020461|gb|EDL78266.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 219
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 133/211 (63%), Gaps = 12/211 (5%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A+ Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K++KL
Sbjct: 14 AADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G +++YD+ +++FT + D WA +I YS + + +
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQD-WATQIKTYSWDNAQV-I 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD------ 178
LVGNK D E ERVV+ ++G A + G F E SAK +NV+Q FE LV I D
Sbjct: 132 LVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKMNESL 191
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEADAAASGC 209
PS + GS G + PP+ ++ GC
Sbjct: 192 EPS-SSPGSNGKGPALGDTPPPQ--PSSCGC 219
>gi|194692552|gb|ACF80360.1| unknown [Zea mays]
gi|414591885|tpg|DAA42456.1| TPA: ras protein ARA-3 [Zea mays]
Length = 218
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 122/166 (73%), Gaps = 3/166 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTI-GVDFKVKYVDVGGKKLK 63
S S+ ++D+L KLL+IGDSGVGKS LLL F+ D F T G+DFKV+ V++ GK++K
Sbjct: 6 SRSRGDYDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKRVK 65
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K
Sbjct: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFDNIRN-WIRNIEQHASD-NVNK 123
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
+LVGNKVD +++RVV+ +G A EYG F E SAKT NV+Q F
Sbjct: 124 ILVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNRNVEQVF 169
>gi|348579296|ref|XP_003475416.1| PREDICTED: ras-related protein Rab-13-like [Cavia porcellus]
Length = 203
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 116/170 (68%), Gaps = 3/170 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFK++ VD+ GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQ-TWMKSIK-ENASAGVERLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
NK D E++R V K+ ARE+G F E SAK+ NV + F L IL
Sbjct: 121 NKCDMEAKRKVQKERADKLAREHGIRFFETSAKSSTNVDEAFSSLARDIL 170
>gi|157107937|ref|XP_001650005.1| ras-related protein Rab-2A, putative [Aedes aegypti]
gi|170056253|ref|XP_001863947.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|108879444|gb|EAT43669.1| AAEL004902-PA [Aedes aegypti]
gi|167876016|gb|EDS39399.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 213
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 137/215 (63%), Gaps = 19/215 (8%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRR+TF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLAE 185
D +S R V K+EG FARE+G +F+E SA+T NV++ F +E+ KI + +
Sbjct: 121 SDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 186 GSKGLKKNIFKQKPP----------EADAAASGCC 210
+ G+K I +Q P ++SGCC
Sbjct: 181 EANGIK--IGQQHSPTNPSLGSGNNPGGQSSSGCC 213
>gi|255587494|ref|XP_002534292.1| protein with unknown function [Ricinus communis]
gi|223525564|gb|EEF28091.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 135/208 (64%), Gaps = 11/208 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
K D ES+R V +G A EYG F E SAKT +NV++ F + I L S
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI--KQRLADTDS 186
Query: 188 KGLKKNIFKQKPPEADAAA-----SGCC 210
+ + I +P +A +A+ S CC
Sbjct: 187 RAEPQTIKINQPDQAGSASQAAPKSACC 214
>gi|410730349|ref|XP_003671354.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS 421]
gi|401780172|emb|CCD26111.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS 421]
Length = 207
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 130/189 (68%), Gaps = 7/189 (3%)
Query: 3 SSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKK 61
S+SA+ + +D + K+L+IGDSGVGKS LL+ F D F TIG+DFK+K VD+ GKK
Sbjct: 2 SASANGKGYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK 61
Query: 62 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDC 121
+KL +WDTAGQERFRT+T++YYRGA GII+VYDVT TF+N+ W K ++ ++ N +
Sbjct: 62 VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIKQ-WFKTVNEHA-NDEA 119
Query: 122 IKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF---EELVLKILD 178
LLVGNK D ++ RVVT ++G + A+E G F+E SAK NV + F +L+ + +D
Sbjct: 120 QLLLVGNKSDMDT-RVVTYEQGESLAKELGLPFVESSAKNDDNVNEIFFTLAKLIQEKID 178
Query: 179 TPSLLAEGS 187
L A GS
Sbjct: 179 ANKLSAAGS 187
>gi|340728042|ref|XP_003402341.1| PREDICTED: ras-related protein Rab-35-like [Bombus terrestris]
Length = 249
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 120/173 (69%), Gaps = 6/173 (3%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIW 67
+E+D+LFKLL+IGDSGVGKSSLLL F + F TIGVDFK++ VD+ G+++KL IW
Sbjct: 51 REYDHLFKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVDIDGERVKLQIW 110
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCI-KLLV 126
DTAGQERFRT+TS+YYRG G+I+VYDVT D+F N+ W EI+ N D + ++LV
Sbjct: 111 DTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKR-WLHEIE---QNCDVVNRVLV 166
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT 179
GNK D +E+VV ++ FA + G E SAK +NVQ+ F + ++L T
Sbjct: 167 GNKNDAPNEKVVLTEDAQRFANQMGIQLFETSAKDNINVQEMFMAITRQVLRT 219
>gi|154339774|ref|XP_001565844.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063162|emb|CAM45362.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 200
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 129/202 (63%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ +++ K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLDSKVIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD T ++F N+ W EID Y++ ++ K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVK-TWLSEIDKYAS-ENVNKILVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++ V + +FA G F+E SAK NV++ F ++ I ++ E
Sbjct: 122 KCDLVTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKTRLAVSGETKS 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ N+ Q PP A CC
Sbjct: 182 VSRPNL--QNPP-APKKEDNCC 200
>gi|1370194|emb|CAA98174.1| RAB8C [Lotus japonicus]
Length = 212
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 133/205 (64%), Gaps = 9/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQER RT+T++YYRGA+GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERVRTITTAYYRGAKGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
K D ES+R V +G A EYG F E SAKT +NV++ F + D LA+
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA---RDIKQRLADTD 185
Query: 188 KGLKKNIFKQKPPEADAAA--SGCC 210
+ K P+ AAA S CC
Sbjct: 186 SKAEPQTIKINQPDQPAAAQNSTCC 210
>gi|56756457|gb|AAW26401.1| SJCHGC06657 protein [Schistosoma japonicum]
Length = 213
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 117/160 (73%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + +++ GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLINIDGKQVKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTFT+L+ W ++ +S++ I +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFTHLT-TWLEDARQHSSSNMVI-MLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV+ F
Sbjct: 121 SDLESRRDVQKEEGEAFAREHGLVFMETSAKTAANVEDAF 160
>gi|15233367|ref|NP_195311.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|75281787|sp|Q38922.1|RAB1B_ARATH RecName: Full=Ras-related protein RABB1b; Short=AtRABB1b; AltName:
Full=Ras-related protein GB2; Short=AtGB2; AltName:
Full=Ras-related protein Rab2C; Short=AtRab2C
gi|1184983|gb|AAA87883.1| ATGB2 [Arabidopsis thaliana]
gi|3805852|emb|CAA21472.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|7270538|emb|CAB81495.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|17529056|gb|AAL38738.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21436445|gb|AAM51423.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21553875|gb|AAM62968.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|332661181|gb|AEE86581.1| GTP-binding protein GB2 [Arabidopsis thaliana]
Length = 211
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + V V G+ +KL IWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRR+TF +L+ W ++ ++ N + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMSIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
D +R V+K+EG FA+E+G LF+E SA+T NV++ F E KIL
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKIL 168
>gi|167537652|ref|XP_001750494.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771034|gb|EDQ84708.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 131/204 (64%), Gaps = 8/204 (3%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYLFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ KK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDQFNSTFISTIGIDFKIKTIELDDKKIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+T++YYRGA GI++VYD+T +F N+ W + I+ + + D ++++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITAEKSFDNIK-TWIRNIE-QNASSDVERMILGNK 122
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI---LDTPSLLAEG 186
D E +RVV+ ++G A EYG F E SAK++++V++ F + I +D+ +
Sbjct: 123 CDMEDKRVVSTEQGEKLAAEYGVPFFETSAKSKIHVEEAFFAMARSIKQKMDSKEVSTPH 182
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
+K+I K + GCC
Sbjct: 183 EH--EKDIIKPDNKPEPKSGGGCC 204
>gi|184186083|ref|NP_001116967.1| rab3 GTPase [Strongylocentrotus purpuratus]
gi|60653473|gb|AAB67800.2| GTP-binding protein [Strongylocentrotus purpuratus]
Length = 219
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 131/208 (62%), Gaps = 5/208 (2%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A+ Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K++KL
Sbjct: 14 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRQDKRVKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YDVT ++F ++ D W +I YS + + +
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFNSVQD-WCTQIKTYSWDNAQV-I 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
LVGNK D E ERV++ +G A + G F E SAK +NV+Q FE LV I D S
Sbjct: 132 LVGNKCDMEDERVISTDKGKQLADQLGLEFFETSAKENINVKQTFERLVDIICDKMSETI 191
Query: 185 EGSKGLKKN--IFKQKPPEADAAASGCC 210
+ + L+ + I P + A++S C
Sbjct: 192 DTDQTLRPSTTITPTDPGQQQASSSCSC 219
>gi|402595096|gb|EJW89022.1| rab family protein 8 [Wuchereria bancrofti]
Length = 209
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 134/203 (66%), Gaps = 5/203 (2%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIW 67
+ +DYLFKLL+IGDSGVGK+ +L F+ D+F TIG+DFK++ +++ GKK+KL IW
Sbjct: 3 KSYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVDRMIIG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-LDTPSLLAEG 186
NK D E R V+++ G A EYG F+E SAK +NV++ F L I L T E
Sbjct: 121 NKCDIEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDIKLKTERASQEN 180
Query: 187 -SKGLKKNIFKQKPPEADAAASG 208
++ + Q P ++ + SG
Sbjct: 181 TTQNTGRITVHQTPRKSSSLFSG 203
>gi|156383922|ref|XP_001633081.1| predicted protein [Nematostella vectensis]
gi|156220146|gb|EDO41018.1| predicted protein [Nematostella vectensis]
Length = 206
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 119/167 (71%), Gaps = 3/167 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+D+LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK++ +++ GKK+KL IWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ +++ QD K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKN-WIRNIEEHAS-QDVEKMVLGNK 122
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
D E R V+K+ G A EYG F+E SAK +NV++ F L I
Sbjct: 123 CDMEDRRQVSKERGEQLAVEYGIKFMETSAKASINVEEAFFTLARDI 169
>gi|123708078|ref|NP_001074105.1| multiple EGF-like-domains 8 [Danio rerio]
gi|120537782|gb|AAI29422.1| Zgc:158741 [Danio rerio]
gi|182891058|gb|AAI64972.1| Zgc:158741 protein [Danio rerio]
Length = 184
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 121/170 (71%), Gaps = 3/170 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIW 67
+ +DYLFKLL+IGDSGVGK+ LL F+ D F TIG+DFK++ +++ GKK+KL IW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELNGKKIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D K+++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITSEKSFENIKN-WIRNIEEHASS-DVEKMILG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
NK D R V+K+ G A +YG F+E SAKT +NV++ F L I+
Sbjct: 121 NKCDMNERRQVSKERGEKLAIDYGIKFLETSAKTSINVEEAFFTLARDIM 170
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis niloticus]
Length = 200
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 123/174 (70%), Gaps = 3/174 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+++D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DFKVK ++V GKK+KL +W
Sbjct: 3 KKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVDGKKVKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + ++L+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVSRMLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 181
NK D E++R V+K+ G A+++G F E SAK+ +NV++ F L IL S
Sbjct: 121 NKCDIEAKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLALARDILKQSS 174
>gi|344283301|ref|XP_003413410.1| PREDICTED: ras-related protein Rab-3D-like [Loxodonta africana]
Length = 371
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 132/211 (62%), Gaps = 14/211 (6%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A+ Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K++KL
Sbjct: 166 AADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKL 225
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G +++YDV +++F + D WA +I YS + + L
Sbjct: 226 QIWDTAGQERYRTITTAYYRGAMGFLLMYDVANQESFAAVQD-WATQIKTYSWDNAQV-L 283
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD------ 178
LVGNK D E ERVV ++G A + G F E SAK +NV+Q FE LV I +
Sbjct: 284 LVGNKCDLEDERVVPTEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 343
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEADAAASGC 209
PS ++GS G + PP+ +SGC
Sbjct: 344 EPS-SSQGSNGKGPALGDTPPPQ----SSGC 369
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 122/170 (71%), Gaps = 3/170 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+++D+LFKLL+IGDSGVGK+ L++ F DN+ TIG+DFKVK ++V GKK+KL +W
Sbjct: 3 KKYDFLFKLLLIGDSGVGKTCLIIRFAEDNYNTTYISTIGIDFKVKTIEVDGKKVKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + ++L+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIR-ENASAGVTRMLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
NK D E++R V+K+ G A+E+ F E SAK+ +NV++ F+ L IL
Sbjct: 121 NKCDVEAKRKVSKETGETLAKEHAIRFFETSAKSSINVEESFQALARDIL 170
>gi|328767509|gb|EGF77558.1| hypothetical protein BATDEDRAFT_20617 [Batrachochytrium
dendrobatidis JAM81]
Length = 208
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 135/208 (64%), Gaps = 3/208 (1%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKL 62
+++ +DYL KLL+IGDSGVGKS LLL F+ D+F TIG+DFK++ +++ GK++
Sbjct: 2 ATSKNASYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGKRI 61
Query: 63 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCI 122
KL IWDTAGQERFRT+T++YYRGA GI++ YDVT +F N+ + W + I+ +++ +
Sbjct: 62 KLQIWDTAGQERFRTITTAYYRGAMGILLTYDVTDERSFNNIRN-WIRNIEQHAS-EGVN 119
Query: 123 KLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
K+L+GNK D ++V++K++G A E+G F+E SAK+ + V++ F L I
Sbjct: 120 KILIGNKCDILDKKVISKEQGQALADEHGIKFLETSAKSNIGVEEAFYMLARDIKKRLID 179
Query: 183 LAEGSKGLKKNIFKQKPPEADAAASGCC 210
A+ LK + +AA +GCC
Sbjct: 180 TAQEKTDLKTAGNVNVNQKGNAATAGCC 207
>gi|296413144|ref|XP_002836276.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630089|emb|CAZ80467.1| unnamed protein product [Tuber melanosporum]
Length = 201
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 124/202 (61%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ V++ K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEAKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +V+DVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVFDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV FA G F+E SAK NV+Q F + +I + +K
Sbjct: 122 KSDIADKKVVEYTVAKEFADSLGIPFLETSAKNATNVEQAFLTMARQIKERMGSTTVNNK 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+Q +A GCC
Sbjct: 182 PTVS--VQQGTGVQQGSAGGCC 201
>gi|410950474|ref|XP_003981930.1| PREDICTED: ras-related protein Rab-3D [Felis catus]
Length = 219
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 130/211 (61%), Gaps = 14/211 (6%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A+ Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K++KL
Sbjct: 14 AADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G +++YDV +++FT + D WA +I YS + + +
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFLLMYDVANQESFTAVQD-WATQIKTYSWDNAQV-I 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD------ 178
LVGNK D E ERVV ++G A + G F E SAK +NV+Q FE LV I +
Sbjct: 132 LVGNKCDLEDERVVPTEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESL 191
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEADAAASGC 209
PS GS G + PPE SGC
Sbjct: 192 EPS-SGPGSNGKGPALGDTPPPE----PSGC 217
>gi|195028532|ref|XP_001987130.1| GH21751 [Drosophila grimshawi]
gi|195383514|ref|XP_002050471.1| GJ22175 [Drosophila virilis]
gi|193903130|gb|EDW01997.1| GH21751 [Drosophila grimshawi]
gi|194145268|gb|EDW61664.1| GJ22175 [Drosophila virilis]
Length = 213
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 136/215 (63%), Gaps = 19/215 (8%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRR+TF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLAE 185
D +S R V K+EG FARE+G +F+E SA+T NV++ F +E+ KI + +
Sbjct: 121 SDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 186 GSKGLKKNIFKQKPP----------EADAAASGCC 210
+ G+K I +Q P A SGCC
Sbjct: 181 EANGIK--IGQQATPTNPALPGSGGAGGAVNSGCC 213
>gi|112983326|ref|NP_001037620.1| ras-related GTP-binding protein Rab3 [Bombyx mori]
gi|102993253|gb|ABF71469.1| ras-related GTP-binding protein Rab3 [Bombyx mori]
Length = 218
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 132/213 (61%), Gaps = 14/213 (6%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A+ Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K++KL
Sbjct: 11 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKL 70
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F ++ D W +I YS + + +
Sbjct: 71 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD-WVTQIKTYSWDNAQV-I 128
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT----- 179
LVGNK D E ERVV+ + G A + G F E SAK +NV+ FE LV I D
Sbjct: 129 LVGNKCDMEEERVVSAERGRQLADQLGVEFYETSAKENINVKAVFERLVDIICDKMSESL 188
Query: 180 ---PSLLAEGSKGLKKNIFKQKPPEADAAASGC 209
P++LA G++G + ++P ++ C
Sbjct: 189 DSEPAMLAGGARGQR---LTEQPQGSNNPNCNC 218
>gi|431918473|gb|ELK17694.1| Ras-related protein Rab-3C [Pteropus alecto]
Length = 219
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 128/200 (64%), Gaps = 7/200 (3%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K++KL
Sbjct: 14 SSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + +
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-I 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
LVGNK D E ERV++ + G + + G F E SAK +NV+Q FE LV I D S
Sbjct: 132 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 191
Query: 185 EGSKGL---KKNI-FKQKPP 200
E + K+N FK+ PP
Sbjct: 192 ETDPAITAAKQNTRFKETPP 211
>gi|327505559|gb|AEA92307.1| Rab3 [Hevea brasiliensis]
Length = 216
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 135/209 (64%), Gaps = 13/209 (6%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE-G 186
K D ES+R V +G A EYG F E SAKT +NV++ F + D LAE
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA---RDIKKRLAETD 185
Query: 187 SKGLKKNIFKQKPPEA-----DAAASGCC 210
SK + I +P +A A S CC
Sbjct: 186 SKAEPQTIKINQPDQAASGGQAAQKSACC 214
>gi|388516339|gb|AFK46231.1| unknown [Medicago truncatula]
Length = 215
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 136/208 (65%), Gaps = 11/208 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLL 183
K D ES+R V EG A EYG F E SAKT +NV++ F ++ ++ DT S
Sbjct: 129 KADMDESKRAVPTSEGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTVS-- 186
Query: 184 AEGSKGLKKNIFKQKPPEADAAA-SGCC 210
+ + +K N Q AA S CC
Sbjct: 187 STEPQSIKINQQDQAANGGQAAQKSACC 214
>gi|340726838|ref|XP_003401759.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
terrestris]
gi|350421632|ref|XP_003492906.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
impatiens]
Length = 209
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 130/198 (65%), Gaps = 10/198 (5%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYLFKLL+IGDSGVGK+ +L F+ D F TIG+DFK++ +++ GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ + + D K+L+GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKN-WIRNIE-ENASADVEKMLLGNK 122
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------LDTPSL 182
+ +R V+K+ G A EYG F+E SAK+ +NV++ F L I L+ +
Sbjct: 123 CELTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKKLEASNP 182
Query: 183 LAEGSKGLKKNIFKQKPP 200
G LK + ++KPP
Sbjct: 183 PKGGGHQLKASEPQRKPP 200
>gi|328779138|ref|XP_003249596.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Apis mellifera]
Length = 192
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/173 (49%), Positives = 120/173 (69%), Gaps = 11/173 (6%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
+GNK D E +RV+ ARE+G F+E SAK +N+ + F EL IL+
Sbjct: 120 LGNKSDMEDKRVI--------AREHGIRFMETSAKANINIDRAFSELAEAILE 164
>gi|167536047|ref|XP_001749696.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771844|gb|EDQ85505.1| predicted protein [Monosiga brevicollis MX1]
Length = 219
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 134/220 (60%), Gaps = 24/220 (10%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + V + K++KL IWDT
Sbjct: 4 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVSIDNKQIKLQIWDT 63
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARSHS-NPNMVIILIGNK 121
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF-----------EELVLKILD 178
D +S+R VT++EG FARE G +F+E SAK NV++ F +E V I +
Sbjct: 122 TDLDSKRAVTREEGEQFARENGLIFMETSAKNATNVEEAFIQTAQAIYSKIQENVFDIKN 181
Query: 179 T-------PSLL-AEGSKGLKKNIFKQKPPEADAAASGCC 210
P L GS L +QKP ++ GCC
Sbjct: 182 EMNGIKVGPQLAGGAGSTRLDLRAPQQKPTNSEGG--GCC 219
>gi|72392251|ref|XP_846926.1| small GTP-binding protein Rab1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|38224657|gb|AAR14146.1| Rab1 [Trypanosoma brucei]
gi|62175231|gb|AAX69377.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei]
gi|70802956|gb|AAZ12860.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261330114|emb|CBH13098.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 208
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 131/209 (62%), Gaps = 12/209 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+D+LFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ +D+ GK +KL IWD
Sbjct: 4 EYDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLDIDGKVIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD T ++F N+ W EID +++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVK-TWLSEIDKFAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++ V + FA G F+E SAK NV+ F E+ I + A+G+
Sbjct: 122 KCDLVTKKAVDTQMAQEFADSLGIPFLETSAKESSNVETAFIEMAKNI--KKRVAAQGAN 179
Query: 189 -----GLKKNIFKQKPPEADAAA--SGCC 210
G + + P ++ SGCC
Sbjct: 180 SGATAGGRPLLTGNNRPATNSGGQKSGCC 208
>gi|389593257|ref|XP_003721882.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
gi|321438384|emb|CBZ12137.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
Length = 200
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 129/202 (63%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ +++ K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD T ++F N+ W EI+ Y++ ++ K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVK-TWLSEIEKYAS-ENVNKILVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++ V + +FA G F+E SAK NV++ F ++ I ++ E
Sbjct: 122 KCDLVTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKARLAVSGEAKS 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ N+ Q PP S CC
Sbjct: 182 AARPNL--QNPPTVKKEDS-CC 200
>gi|13929006|ref|NP_113906.1| ras-related protein Rab-2A [Rattus norvegicus]
gi|131789|sp|P05712.1|RAB2A_RAT RecName: Full=Ras-related protein Rab-2A
gi|206555|gb|AAA42007.1| ras protein [Rattus norvegicus]
Length = 212
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + T+GV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|444317447|ref|XP_004179380.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS 6284]
gi|387512421|emb|CCH59861.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS 6284]
Length = 210
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IG+SGVGKS LLL F+ D + + TIGVDFK+K +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYSNDYISTIGVDFKIKTIEIDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRG+ GII+VYDVT +D+F ++ +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFNSVK-MWLQEIDRYATSS-VLKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 181
K D + +R+V FA F+E SA NV++ F + +I ++ S
Sbjct: 122 KSDLKDKRIVEYDVAKEFAETNNMPFLETSALDSTNVEEAFLTMAKQIKESLS 174
>gi|383864073|ref|XP_003707504.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Megachile
rotundata]
Length = 209
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 130/198 (65%), Gaps = 10/198 (5%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYLFKLL+IGDSGVGK+ +L F+ D F TIG+DFK++ +++ GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ + + D K+L+GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKN-WIRNIE-ENASADVEKMLLGNK 122
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------LDTPSL 182
+ +R V+K+ G A EYG F+E SAK+ +NV++ F L I L+ +
Sbjct: 123 CELTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKKLEASNP 182
Query: 183 LAEGSKGLKKNIFKQKPP 200
G LK + ++KPP
Sbjct: 183 PKGGGHQLKASEPQRKPP 200
>gi|323305102|gb|EGA58852.1| Sec4p [Saccharomyces cerevisiae FostersB]
gi|323348772|gb|EGA83012.1| Sec4p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765838|gb|EHN07343.1| Sec4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 215
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 129/191 (67%), Gaps = 7/191 (3%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGG 59
+ +SS + + +D + K+L+IGDSGVGKS LL+ F D F TIG+DFK+K VD+ G
Sbjct: 7 VSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
KK+KL +WDTAGQERFRT+T++YYRGA GII+VYDVT TFTN+ W K ++ ++ N
Sbjct: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-ND 124
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF---EELVLKI 176
+ LLVGNK D E+ RVVT +G A+E G FIE SAK NV + F +L+ +
Sbjct: 125 EAQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183
Query: 177 LDTPSLLAEGS 187
+D+ L+ G+
Sbjct: 184 IDSNKLVGVGN 194
>gi|307167688|gb|EFN61191.1| Ras-related protein Rab-8A [Camponotus floridanus]
gi|332026766|gb|EGI66875.1| Ras-related protein Rab-8A [Acromyrmex echinatior]
Length = 209
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 130/198 (65%), Gaps = 10/198 (5%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+DYLFKLL+IGDSGVGK+ +L F+ D F TIG+DFK++ +++ GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ + + D K+L+GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNDKSFENIKN-WIRNIE-ENASADVEKMLLGNK 122
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------LDTPSL 182
+ +R VTK+ G A EYG F+E SAK+ +NV++ F L I L+ +
Sbjct: 123 CELTDKRQVTKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKKLEASNP 182
Query: 183 LAEGSKGLKKNIFKQKPP 200
G LK + ++KPP
Sbjct: 183 PKGGGHQLKASEPQRKPP 200
>gi|358393423|gb|EHK42824.1| secretion related small GTPase SRG1 [Trichoderma atroviride IMI
206040]
Length = 205
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 135/211 (63%), Gaps = 13/211 (6%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
+ S + +D+L KLL+IGDSGVGKS LL F+ D+F TIG+DFK++ +++ GK++K
Sbjct: 3 APSNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVK 62
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W + ++ ++T + K
Sbjct: 63 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFANIR-TWFQNVEQHAT-EGVNK 120
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVL----KILDT 179
+L+GNK D E +RVV+ ++G A E G F+E SAK+ +N+ Q F L +++D
Sbjct: 121 ILIGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSLAADIKKRLIDN 180
Query: 180 PSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
A S G+K ++D S CC
Sbjct: 181 QKTDAGVSSGVKVG------EQSDNGGSKCC 205
>gi|50306647|ref|XP_453297.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642431|emb|CAH00393.1| KLLA0D05313p [Kluyveromyces lactis]
Length = 204
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 128/203 (63%), Gaps = 4/203 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK+K V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID + T +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVK-TWLQEIDRFGT-AGVLKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS-LLAEGS 187
K D ++VV + FA G FIE SA NV++ F + +I ++ + +
Sbjct: 122 KNDLTDKKVVDTEVAKEFADSIGIPFIETSALDSSNVEEAFLIMTKQIKESVAKQQKDNG 181
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
+ K+ K + GCC
Sbjct: 182 RAEDKSNVNLKGQSLTGSNGGCC 204
>gi|18447913|dbj|BAB84322.1| ras-related protein RAB8-1 [Nicotiana tabacum]
Length = 216
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 131/209 (62%), Gaps = 13/209 (6%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
K D ES+R V +G A EYG F E SAKT +NV++ F + D LAE
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIA---RDIKQRLAESD 185
Query: 188 KGLKKNIFKQKPPEADAAA------SGCC 210
+ + P+ A S CC
Sbjct: 186 NRAEPQTIRINQPDQGAGGAQTAQKSACC 214
>gi|123417386|ref|XP_001305092.1| GTP-binding protein YPTM2 [Trichomonas vaginalis G3]
gi|62869549|gb|AAX97495.1| small Rab GTPase Rab1a [Trichomonas vaginalis]
gi|72537672|gb|AAZ73762.1| small Rab GTPase [Trichomonas vaginalis]
gi|72537674|gb|AAZ73763.1| small Rab GTPase [Trichomonas vaginalis]
gi|121886589|gb|EAX92162.1| GTP-binding protein YPTM2, putative [Trichomonas vaginalis G3]
Length = 202
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 131/207 (63%), Gaps = 9/207 (4%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLA 65
+ ++DYLFK+L+IG+SGVGKS LLL F D F + TIGVDFK++ +++ GK +KL
Sbjct: 2 TANDYDYLFKVLIIGNSGVGKSCLLLRFAEDMFSDNYISTIGVDFKIRKIELDGKSIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRT+T SYYRG+ GI++VYD+T RD+F + W EID +++ QD +LL
Sbjct: 62 IWDTAGQERFRTITKSYYRGSNGIVVVYDITNRDSFEQVQH-WMSEIDNHAS-QDVCRLL 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
VGNK D +R V +EG AR++G F+E SAK +NV+ F + + +A
Sbjct: 120 VGNKADL-PDRAVKTEEGEALARQFGIPFMETSAKESLNVENMFITMATSMKKKVGGMAA 178
Query: 186 --GSKGLKKNIFKQKPPEADAAASGCC 210
S G + I K + SGCC
Sbjct: 179 SGSSNGGQVTIAKGQSVN---QKSGCC 202
>gi|226479810|emb|CAX73201.1| RAB2, member RAS oncogene family [Schistosoma japonicum]
Length = 213
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 117/160 (73%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + +++ GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLINIDGKQVKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTFT+L+ W ++ +S++ I +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFTHLT-TWLEDARQHSSSNMVI-MLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV+ F
Sbjct: 121 SDLESRRDVQKEEGEAFAREHGLVFMETSAKTAANVEDAF 160
>gi|387017936|gb|AFJ51086.1| ras-related protein Rab-3D-like [Crotalus adamanteus]
Length = 220
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 132/207 (63%), Gaps = 5/207 (2%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A+ Q FDY+FKLL+IG+S VGK+S L + D+F + T+G+DFKVK V K++KL
Sbjct: 14 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSDFVSTVGIDFKVKTVYRNEKRVKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G +++YD++ +++F+ + D WA +I YS + + +
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFLLMYDISNQESFSAVQD-WATQIKTYSWDNAQV-I 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 184
LVGNK D E +RV+ ++G A E G F E SAK +NV+Q FE LV I + +
Sbjct: 132 LVGNKCDLEDDRVIPTEDGKRLADELGLEFFEASAKDNINVKQVFERLVDIICEKMNESL 191
Query: 185 EGSKGLKKNIFKQKP--PEADAAASGC 209
+ S GL K +D+ +S C
Sbjct: 192 DASSGLNSTNHKNTALKETSDSQSSNC 218
>gi|291231114|ref|XP_002735510.1| PREDICTED: mel transforming oncogene-like [Saccoglossus
kowalevskii]
Length = 208
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDT 69
+D+LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK++ +++ GKK+KL IWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQERFRT+T++YYRGA GI++VYD+T +F N+ W + I+ +++ D K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKK-WIRNIEEHAS-ADVEKMILGNK 122
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
D E R VTK+ G A EYG F+E SAK VNV++ F L I
Sbjct: 123 CDMEDRRTVTKERGEQLAIEYGIKFMETSAKASVNVEEAFITLARDI 169
>gi|190406568|gb|EDV09835.1| GTP-binding protein SAS1 [Saccharomyces cerevisiae RM11-1a]
gi|207345675|gb|EDZ72422.1| YFL005Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146187|emb|CAY79446.1| Sec4p [Saccharomyces cerevisiae EC1118]
gi|323355176|gb|EGA87003.1| Sec4p [Saccharomyces cerevisiae VL3]
Length = 215
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 129/191 (67%), Gaps = 7/191 (3%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGG 59
+ +SS + + +D + K+L+IGDSGVGKS LL+ F D F TIG+DFK+K VD+ G
Sbjct: 7 VSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
KK+KL +WDTAGQERFRT+T++YYRGA GII+VYDVT TFTN+ W K ++ ++ N
Sbjct: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-ND 124
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF---EELVLKI 176
+ LLVGNK D E+ RVVT +G A+E G FIE SAK NV + F +L+ +
Sbjct: 125 EAQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183
Query: 177 LDTPSLLAEGS 187
+D+ L+ G+
Sbjct: 184 IDSNKLVGVGN 194
>gi|45185452|ref|NP_983169.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|44981141|gb|AAS50993.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|374106372|gb|AEY95282.1| FABR220Wp [Ashbya gossypii FDAG1]
Length = 204
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 127/203 (62%), Gaps = 4/203 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + + TIGVDFK+K V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y T +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFDNMK-TWLQEIDRYGT-AGVVKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA-EGS 187
K D + ++VV + FA +E SA NV++ F + +I +T S E
Sbjct: 122 KNDLKDKKVVDFEVAREFADSLNIPVLETSALDSSNVEEAFLTMARQIKETMSHQQKESG 181
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
K K+ K + GCC
Sbjct: 182 KKDDKSGVNLKGQSLANSGGGCC 204
>gi|427787333|gb|JAA59118.1| Putative rab2a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 212
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D E+ R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLETRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAF 160
>gi|325303716|tpg|DAA34556.1| TPA_exp: RAS oncogene family member RAB2 [Amblyomma variegatum]
Length = 212
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D E+ R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLETRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAF 160
>gi|225719742|gb|ACO15717.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 126/202 (62%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI++VYDVT +D+F NL +EID Y+ ++ K LVG+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIVVVYDVTDQDSFNNLKQRL-QEIDRYAC-ENVNKPLVGD 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV +A + F+E SAK NV+Q F + +I + +
Sbjct: 122 KCDLTTKKVVDYTTAKEYADQLSMPFLEASAKNATNVEQAFMTMAAEIKN--RVGPPAPS 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + P + SGCC
Sbjct: 180 GPSGQVKIDSTPVQSKSGSGCC 201
>gi|159490221|ref|XP_001703081.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158270827|gb|EDO96660.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 218
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKL 62
+ + +FD L KLL++GDSGVGKS LLL FT D F TIG+DFK+K VDV GK +
Sbjct: 2 AQGRRGDFDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVEGKLV 61
Query: 63 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCI 122
KL IWDTAGQERFRT+TS+YYRGAQGII+VYD+T +F N+ + W + I+ ++++ +
Sbjct: 62 KLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEGSFNNVRN-WMRNIEQHASD-NVN 119
Query: 123 KLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL 177
K+LVGNK+D +RVV++ G A EYG F E SAK V V++ F + +L
Sbjct: 120 KILVGNKLDLSEKRVVSEARGRALADEYGFRFFETSAKDNVCVEEAFLSVAKDVL 174
>gi|14318517|ref|NP_116650.1| Sec4p [Saccharomyces cerevisiae S288c]
gi|134394|sp|P07560.1|SEC4_YEAST RecName: Full=Ras-related protein SEC4; AltName: Full=Suppressor of
RHO3 protein 6
gi|172566|gb|AAA35032.1| ras-like protein [Saccharomyces cerevisiae]
gi|836749|dbj|BAA09233.1| Ras-related protein [Saccharomyces cerevisiae]
gi|51013137|gb|AAT92862.1| YFL005W [Saccharomyces cerevisiae]
gi|151940757|gb|EDN59144.1| small GTP binding protein [Saccharomyces cerevisiae YJM789]
gi|256268867|gb|EEU04218.1| Sec4p [Saccharomyces cerevisiae JAY291]
gi|285811889|tpg|DAA12434.1| TPA: Sec4p [Saccharomyces cerevisiae S288c]
gi|349577911|dbj|GAA23078.1| K7_Sec4p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299666|gb|EIW10759.1| Sec4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 129/191 (67%), Gaps = 7/191 (3%)
Query: 1 MDSSSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGG 59
+ +SS + + +D + K+L+IGDSGVGKS LL+ F D F TIG+DFK+K VD+ G
Sbjct: 7 VSASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDING 66
Query: 60 KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQ 119
KK+KL +WDTAGQERFRT+T++YYRGA GII+VYDVT TFTN+ W K ++ ++ N
Sbjct: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-ND 124
Query: 120 DCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF---EELVLKI 176
+ LLVGNK D E+ RVVT +G A+E G FIE SAK NV + F +L+ +
Sbjct: 125 EAQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183
Query: 177 LDTPSLLAEGS 187
+D+ L+ G+
Sbjct: 184 IDSNKLVGVGN 194
>gi|348522973|ref|XP_003448998.1| PREDICTED: ras-related protein Rab-1A-like [Oreochromis niloticus]
Length = 212
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +D+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ ++ +LLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQ-WLDEIDRYAC-ENVSRLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 176
K D S++VV + A F+E SAK+ NV++ F + +I
Sbjct: 122 KSDLVSKKVVDAATAQDLASSLKIPFLETSAKSSDNVERAFLTMASEI 169
>gi|54696254|gb|AAV38499.1| RAB2, member RAS oncogene family [synthetic construct]
gi|61368760|gb|AAX43232.1| RAB2 member RAS oncogene family [synthetic construct]
Length = 213
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 115/160 (71%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK +IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYTIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|72078956|ref|XP_782537.1| PREDICTED: ras-related protein Rab-2A-like isoform 2
[Strongylocentrotus purpuratus]
Length = 212
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 134/212 (63%), Gaps = 14/212 (6%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + +++ GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S++ I +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSSSNMVI-MLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLAE 185
D E+ R V K+EG FARE+G +F+E SAKT NV++ F +E+ KI + +
Sbjct: 121 SDLEARRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQEGVFDINN 180
Query: 186 GSKGLK----KNIFKQKPPEAD---AAASGCC 210
+ G+K N P D GCC
Sbjct: 181 EANGIKLGPQHNTVNPAQPSGDRGQQGGQGCC 212
>gi|350411512|ref|XP_003489373.1| PREDICTED: ras-related protein Rab-3-like [Bombus impatiens]
Length = 270
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 126/203 (62%), Gaps = 11/203 (5%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
A+ Q FDY+FKLL+IG+S VGK+S L + D+F T+G+DFKVK V K++KL
Sbjct: 60 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKL 119
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F ++ D W +I YS + + +
Sbjct: 120 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD-WVTQIKTYSCDNAQV-I 177
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT----- 179
LVGNK D E ERV+T + G A + G F E SAK +N++ FE+LV I D
Sbjct: 178 LVGNKCDMEDERVITTERGKQLADQLGVQFFETSAKENINIKTVFEQLVDIICDKMSESL 237
Query: 180 ---PSLLAEGSKGLKKNIFKQKP 199
P+LLA G K +P
Sbjct: 238 DNDPTLLAGGMGQAKGQRLTDQP 260
>gi|325179736|emb|CCA14139.1| Rab8 family GTPase putative [Albugo laibachii Nc14]
Length = 219
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 135/208 (64%), Gaps = 13/208 (6%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+ FD KLLMIGDSGVGK+ LLL + +D+F TIG+DFK+K +++ GKK+KL
Sbjct: 21 HENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDGKKIKLQ 80
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRT+T+SY+RGAQGI++VYDVT R +F ++ + W +I ++ + K+L
Sbjct: 81 IWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRN-WVGQIQQHA-DVHVNKIL 138
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE 185
+GNK D ++V++ +EG A EYG F E SAK +NV+ F ++ ++ + L+ E
Sbjct: 139 IGNKCDMMDDKVISTEEGQALADEYGVRFYETSAKNNINVEGGFIDIAREVKN--RLMEE 196
Query: 186 GSKGLKKNI---FKQKPPEADAAASGCC 210
G K++I K PP+ GCC
Sbjct: 197 GGSHKKESINLSAKAIPPK-----KGCC 219
>gi|392878122|gb|AFM87893.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 115/160 (71%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVKFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|323450177|gb|EGB06060.1| hypothetical protein AURANDRAFT_38219 [Aureococcus anophagefferens]
Length = 204
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 117/164 (71%), Gaps = 4/164 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLA 65
S++++D+LFKL++IGD+GVGKS LLL F D F E TIGVDF+ + V V GK +KL
Sbjct: 2 SKRDYDHLFKLVLIGDTGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKVDGKTVKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERFRT+TS+YYRGA GIIMVYDVT ++F ++SD W E++ Y+ C KLL
Sbjct: 62 IWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVSD-WLTEVNRYANEGTC-KLL 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
VGNK D E ++VVT + +A G F+E SAK NV++ F
Sbjct: 120 VGNKCDME-DKVVTTEAAKEYADGLGIPFLETSAKNATNVEEAF 162
>gi|388498114|gb|AFK37123.1| unknown [Lotus japonicus]
Length = 212
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 133/206 (64%), Gaps = 11/206 (5%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
++DYL KLL+IGDSGVGKS LLL F+ +F TIG+DFK++ +++ GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 129 KVD-KESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTPSLLAEG 186
K D ES+R V +G A EYG F E S KT +NV EE++ I D LA+
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSTKTNLNV----EEVLFSIARDIKQRLADT 184
Query: 187 SKGLKKNIFKQKPPEADAAA--SGCC 210
+ K P+ AAA S CC
Sbjct: 185 DSKAEPQTIKINQPDQPAAAQNSTCC 210
>gi|383848305|ref|XP_003699792.1| PREDICTED: ras-related protein Rab-10-like isoform 2 [Megachile
rotundata]
Length = 192
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/173 (49%), Positives = 119/173 (68%), Gaps = 11/173 (6%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
+GNK D E RV+ ARE+G F+E SAK +N+ + F EL IL+
Sbjct: 120 LGNKSDMEDRRVI--------AREHGIRFMETSAKANINIDRAFSELAEAILE 164
>gi|301613321|ref|XP_002936157.1| PREDICTED: ras-related protein Rab-2A [Xenopus (Silurana)
tropicalis]
Length = 211
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 115/160 (71%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+ NK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIANK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D ES R V K+EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160
>gi|17507539|ref|NP_491233.1| Protein UNC-108 [Caenorhabditis elegans]
gi|308485248|ref|XP_003104823.1| CRE-UNC-108 protein [Caenorhabditis remanei]
gi|308257521|gb|EFP01474.1| CRE-UNC-108 protein [Caenorhabditis remanei]
gi|341876619|gb|EGT32554.1| CBN-UNC-108 protein [Caenorhabditis brenneri]
gi|341895318|gb|EGT51253.1| hypothetical protein CAEBREN_21630 [Caenorhabditis brenneri]
gi|373219190|emb|CCD66422.1| Protein UNC-108 [Caenorhabditis elegans]
Length = 214
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + V + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTS-WLEDARQHS-NSNMVIMLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 169
D E+ R V ++EG FARE+G +F+E SAKT NV++ F
Sbjct: 121 SDLEARREVKREEGEAFAREHGLVFMETSAKTAANVEEAF 160
>gi|221121860|ref|XP_002155452.1| PREDICTED: ras-related protein Rab-2-like [Hydra magnipapillata]
Length = 212
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 132/212 (62%), Gaps = 14/212 (6%)
Query: 11 FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSP-TIGVDFKVKYVDVGGKKLKLAIWDT 69
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNK 129
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L+ W ++ +S++ I +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSSSNMVI-MLIGNK 120
Query: 130 VDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF-----------EELVLKILD 178
D E+ R V K+EG FARE+G +F+E SAKT NV++ F +E V I +
Sbjct: 121 SDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIGTAKEIYQKIQEGVFDINN 180
Query: 179 TPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 210
+ + G + + A+ + GCC
Sbjct: 181 EANGIKIGPQHTSSSPSTISGGAANQQSGGCC 212
>gi|1613773|gb|AAB16753.1| Rab1 [Plasmodium falciparum]
Length = 207
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 129/203 (63%), Gaps = 5/203 (2%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIW 67
+++DYL+K+++IGDSGVGKS +LL F+ D+F E TIGVDF+ + + V K +KL IW
Sbjct: 7 RDYDYLYKIILIGDSGVGKSCILLRFSDDHFTESYITTIGVDFRFRTIKVDDKIVKLQIW 66
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TS+YYRGA GII++YD T R++F +++D W EI+ Y TN+D KLLVG
Sbjct: 67 DTAGQERFRTITSAYYRGADGIIIIYDTTDRNSFLHIND-WMNEINKY-TNEDTCKLLVG 124
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D + + +T EG N A+E FIE S K NV+ F + +++ S
Sbjct: 125 NKADCKDDIEITTMEGQNKAKELNISFIETSGKDATNVELAFTMITQELIKKKKKKNFTS 184
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
LK N K K D + C
Sbjct: 185 --LKNNHAKLKLSTHDNSPQSFC 205
>gi|56754975|gb|AAW25670.1| SJCHGC06150 protein [Schistosoma japonicum]
gi|226470410|emb|CAX70485.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485751|emb|CAX75295.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485753|emb|CAX75296.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485755|emb|CAX75297.1| Rab-protein 10 [Schistosoma japonicum]
Length = 205
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 126/183 (68%), Gaps = 4/183 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ LL+ + ++ TIG+DFK+K +++ GKK+KL
Sbjct: 2 AKKSYDALFKLLLIGDSGVGKTCLLIRYVDGSYSPSFISTIGIDFKIKTIELEGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI+M+YD+T R TF N+ W K I Y++ +D KL+
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMMIYDITNRRTFDNIQ-TWMKNICDYAS-EDVEKLV 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTPSLLA 184
VGNK D ++ R V+ +EG AR + F+E SA T NV + FEEL L IL TP+
Sbjct: 120 VGNKCDFDNRRAVSYEEGSEKARLHRIKFLETSAMTGENVNKAFEELTLAILRKTPTRGH 179
Query: 185 EGS 187
E S
Sbjct: 180 EPS 182
>gi|339250788|ref|XP_003374379.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316969320|gb|EFV53438.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 176
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 126/173 (72%), Gaps = 3/173 (1%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++++D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K +++ GKK+KL
Sbjct: 2 AKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T SYYRGA GI++VYD+T + +F N++ W + I+ +++ +D K+L
Sbjct: 62 IWDTAGQERFHTITMSYYRGAMGIMLVYDITNQKSFENITK-WLRNIEEHAS-EDVEKML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
+GNK D E +R+V+K+ G A ++G F+E SAK ++N+ + F +L IL+
Sbjct: 120 LGNKCDIEEKRMVSKERGEEIAGKHGIRFLETSAKAKINIDKAFYDLAEAILN 172
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,067,435,693
Number of Sequences: 23463169
Number of extensions: 119017754
Number of successful extensions: 469836
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 19666
Number of HSP's successfully gapped in prelim test: 6331
Number of HSP's that attempted gapping in prelim test: 414667
Number of HSP's gapped (non-prelim): 26946
length of query: 210
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 74
effective length of database: 9,168,204,383
effective search space: 678447124342
effective search space used: 678447124342
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)