BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028329
(210 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23657|RABC1_ARATH Ras-related protein RABC1 OS=Arabidopsis thaliana GN=RABC1 PE=2
SV=1
Length = 212
Score = 357 bits (917), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 171/198 (86%), Positives = 187/198 (94%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLK 63
SS+ Q EFDYLFK+L+IGDSGVGKSSLLLSFTS+ F++LSPTIGVDFKVKY+ +G KKLK
Sbjct: 3 SSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLK 62
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSD+WAKEIDLYSTNQDCIK
Sbjct: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIK 122
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+LVGNKVDKESER V+KKEGI+FAREYGCLF+ECSAKTRVNV+QCFEELVLKIL+TPSL
Sbjct: 123 MLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLT 182
Query: 184 AEGSKGLKKNIFKQKPPE 201
AEGS G KKNIFKQ P +
Sbjct: 183 AEGSSGGKKNIFKQNPAQ 200
>sp|O49841|RAC2A_ARATH Ras-related protein RABC2a OS=Arabidopsis thaliana GN=RABC2A PE=1
SV=1
Length = 210
Score = 315 bits (807), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 144/207 (69%), Positives = 175/207 (84%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLK 63
SS+ Q +D FK+L+IGDSGVGKSSLL+SF S + E+L+PTIGVDFK+K + VGGK+LK
Sbjct: 3 SSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLK 62
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNL DVW KEI+LYSTNQ+C++
Sbjct: 63 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVR 122
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+LVGNKVD+ESER V+++EGI A+E C+F+ECSA+TR NV+QCFEEL LKI++ PSLL
Sbjct: 123 MLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLL 182
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
EGS +K+NI KQKP SGCC
Sbjct: 183 EEGSSAVKRNILKQKPEHQTNTQSGCC 209
>sp|Q9SF92|RAC2B_ARATH Ras-related protein RABC2b OS=Arabidopsis thaliana GN=RABC2B PE=2
SV=1
Length = 205
Score = 263 bits (673), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 133/207 (64%), Positives = 166/207 (80%), Gaps = 6/207 (2%)
Query: 4 SSASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELSPTIGVDFKVKYVDVGGKKLK 63
SS+ Q +D FK+L+IGDSGVGKSSLLLSF S + E+L+PTIGVDFK+K + V GK+LK
Sbjct: 3 SSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKRLK 62
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+R+TF NL+D+WAKEI+LYSTN DCIK
Sbjct: 63 LTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIK 122
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+LVGNKVD+ESER V+++EG+ A++ CLF ECSA+TR NV CFEEL LKI++ PSLL
Sbjct: 123 MLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPSLL 182
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
EGS +K+ P+ A CC
Sbjct: 183 EEGSSSVKRK------PDYRAHQGRCC 203
>sp|P36862|YPTV3_VOLCA GTP-binding protein yptV3 OS=Volvox carteri GN=YPTV3 PE=3 SV=1
Length = 203
Score = 230 bits (586), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 137/179 (76%), Gaps = 1/179 (0%)
Query: 12 DYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWDTA 70
DY FK+L++GDSGVGKS +L FTS FEE + TIGVDFKVKY+ GK+ KL IWDTA
Sbjct: 7 DYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDTA 66
Query: 71 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV 130
GQERFRTLTSSYYRGAQGII VYDVTRRDTF +L W +E D+YST + IK++V NKV
Sbjct: 67 GQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVANKV 126
Query: 131 DKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKG 189
D ++R V+ +EG +FAR +GCLF+E SA+ + V Q FEEL+LKILDTP LL + G
Sbjct: 127 DLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAVG 185
>sp|Q6DHC1|RB18B_DANRE Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1
Length = 205
Score = 215 bits (547), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/197 (58%), Positives = 139/197 (70%), Gaps = 4/197 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + + G + KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVT+RDTFT L + W E++ Y T D +K+LVGNK+DK+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKIDKD 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+ R V + EG+ FAR++ LFIE SAKTR VQ FEELV KIL TP L E S
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLW-ESSIQNHGV 185
Query: 194 IFKQKPPEADAAASGCC 210
P+ A G C
Sbjct: 186 QLSDNEPQRQGACGGYC 202
>sp|Q5ZLG1|RAB18_CHICK Ras-related protein Rab-18 OS=Gallus gallus GN=RAB18 PE=2 SV=1
Length = 206
Score = 213 bits (543), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 135/180 (75%), Gaps = 5/180 (2%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS--KGLK 191
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L S KG+K
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESESQNKGVK 186
>sp|P35293|RAB18_MOUSE Ras-related protein Rab-18 OS=Mus musculus GN=Rab18 PE=2 SV=2
Length = 206
Score = 213 bits (541), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 137/197 (69%), Gaps = 3/197 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L ++
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVK 186
Query: 194 IFKQKPPEADAAASGCC 210
+ ++ A G C
Sbjct: 187 LSHREESRGGGACGGYC 203
>sp|Q5EB77|RAB18_RAT Ras-related protein Rab-18 OS=Rattus norvegicus GN=Rab18 PE=2 SV=1
Length = 206
Score = 212 bits (540), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 137/197 (69%), Gaps = 3/197 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKN 193
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L ++
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVK 186
Query: 194 IFKQKPPEADAAASGCC 210
+ ++ A G C
Sbjct: 187 LSPREESHGGGACGGYC 203
>sp|Q5R5H5|RAB18_PONAB Ras-related protein Rab-18 OS=Pongo abelii GN=RAB18 PE=2 SV=1
Length = 206
Score = 211 bits (537), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 129/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>sp|Q9NP72|RAB18_HUMAN Ras-related protein Rab-18 OS=Homo sapiens GN=RAB18 PE=1 SV=1
Length = 206
Score = 211 bits (537), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 129/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>sp|Q0IIG8|RAB18_BOVIN Ras-related protein Rab-18 OS=Bos taurus GN=RAB18 PE=2 SV=1
Length = 206
Score = 211 bits (536), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 129/169 (76%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSLLL FT D F+ EL+ TIGVDFKVK + V G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R V + EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>sp|Q05976|RB18A_LYMST Ras-related protein Rab-18A OS=Lymnaea stagnalis GN=RAB18A PE=2
SV=1
Length = 202
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/203 (55%), Positives = 137/203 (67%), Gaps = 6/203 (2%)
Query: 8 QQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAI 66
+QE K+L+IG+SGVGKSSLLL FT D F+ E + TIGVDFKVK + V G K KLAI
Sbjct: 3 EQEIITTLKILIIGESGVGKSSLLLRFTEDTFDPEQAATIGVDFKVKTLTVEGNKTKLAI 62
Query: 67 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLV 126
WDTAGQERFRTLT SYYRGAQG+I+VYDV+ + +F L D W E++ +ST D +K+LV
Sbjct: 63 WDTAGQERFRTLTPSYYRGAQGVILVYDVSSKQSFNKL-DAWLNELETFSTKHDMVKMLV 121
Query: 127 GNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG 186
GNK+D+ + VTK EG+ FAR++ LFIE SAKT VQ FEELV KI+ TP L
Sbjct: 122 GNKIDRANHE-VTKDEGLKFARKHHMLFIEASAKTNDGVQCAFEELVEKIIQTPGLWETS 180
Query: 187 SKGLKKNIFKQKPPEADAAASGC 209
SK L PE + C
Sbjct: 181 SKNL---TLSNHGPEGQGQSCYC 200
>sp|Q8MXS1|RAB18_CAEEL Ras-related protein Rab-18 OS=Caenorhabditis elegans GN=rab-18 PE=3
SV=1
Length = 203
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 127/169 (75%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSL+L F D F+ E + TIGVDF+V + + G ++KLAIWDTAGQE
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQE 71
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I VYDVT R +F L+ W +E+D Y TN + IK++V NK+D
Sbjct: 72 RFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNH-WMQEVDTYCTNDNIIKMMVANKIDMP 130
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ RVVT++EG+ FA+ + LFIE SAKT+ VQ FEEL+ KI+ TP L
Sbjct: 131 N-RVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDL 178
>sp|P90726|RAB18_CAEBR Ras-related protein Rab-18 OS=Caenorhabditis briggsae GN=rab-18
PE=3 SV=1
Length = 202
Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 124/169 (73%), Gaps = 3/169 (1%)
Query: 15 FKLLMIGDSGVGKSSLLLSFTSDNFE-ELSPTIGVDFKVKYVDVGGKKLKLAIWDTAGQE 73
K+L+IG+SGVGKSSL+L F D F+ E + TIGVDF+V + + G ++KLAIWDTAGQE
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMTIDGNRVKLAIWDTAGQE 71
Query: 74 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKE 133
RFRTLT SYYRGAQG+I VYDVT R +F L W E+D Y TN + IK++V NK+D
Sbjct: 72 RFRTLTPSYYRGAQGVICVYDVTSRSSFEKLKH-WMTEVDTYCTNDNVIKMMVANKIDMP 130
Query: 134 SERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 182
+ R VT++EG+ FA+ + LFIE SAKT+ VQ FEEL+ KI+ TP L
Sbjct: 131 N-RTVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDL 178
>sp|Q54GY8|RAB18_DICDI Ras-related protein Rab-18 OS=Dictyostelium discoideum GN=rab18
PE=3 SV=1
Length = 202
Score = 192 bits (487), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 130/172 (75%), Gaps = 3/172 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E D +K+L+IGDS VGK+S++ F+ D F+E L TIGV+FK+K V V GKK+ L IWD
Sbjct: 2 EEDKQYKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWD 61
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQE+FR L SSYYRGA GII+ YDVT+R++F NL + W E++ ++ + +KLLVGN
Sbjct: 62 TAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNL-NYWLNEVENFANRSNLVKLLVGN 120
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 180
K+DKE+ R VT++EG FA++ LFIECSAK+++ +QQ FEEL KI++ P
Sbjct: 121 KIDKEN-REVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIP 171
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3
Length = 205
Score = 184 bits (468), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 131/207 (63%), Gaps = 4/207 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A K N+ Q P + GCC
Sbjct: 180 ATAGGAEKSNVKIQSTP-VKQSGGGCC 205
>sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3
Length = 205
Score = 184 bits (468), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 131/207 (63%), Gaps = 4/207 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A K N+ Q P + GCC
Sbjct: 180 ATAGGAEKSNVKIQSTP-VKQSGGGCC 205
>sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3
Length = 205
Score = 184 bits (468), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 131/207 (63%), Gaps = 4/207 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A K N+ Q P + GCC
Sbjct: 180 ATAGGAEKSNVKIQSTP-VKQSGGGCC 205
>sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3
Length = 205
Score = 184 bits (468), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 131/207 (63%), Gaps = 4/207 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A K N+ Q P + GCC
Sbjct: 180 ATAGGAEKSNVKIQSTP-VKQSGGGCC 205
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 184 bits (467), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 134/204 (65%), Gaps = 8/204 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PSLLAEG 186
K D +++VV FA G F+E SAK NV+Q F + +I P + G
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGG 181
Query: 187 SKGLKKNIFKQKPPEADAAASGCC 210
S+ K N+ Q P ++ GCC
Sbjct: 182 SE--KSNVNIQSTP-VKSSGGGCC 202
>sp|Q52NJ2|RAB1A_PIG Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3
Length = 205
Score = 184 bits (466), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 130/207 (62%), Gaps = 4/207 (1%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S+ E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT + +F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
LLVGNK D +++VV FA G F+E SAK NV+Q F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 AEGSKGLKKNIFKQKPPEADAAASGCC 210
A K N+ Q P + GCC
Sbjct: 180 ATAGGAEKSNVKIQSTP-VKQSGGGCC 205
>sp|Q54NU2|RAB1D_DICDI Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D
PE=1 SV=1
Length = 204
Score = 183 bits (464), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIWD 68
E D+ FK+L+IGDSGVGKS LLL F D++ + TIGVDFK+K +++ GK +KL IWD
Sbjct: 6 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 65
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGAQGII+VYD T +D+FTN+ W EID Y+ ++ KLLVGN
Sbjct: 66 TAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQ-WMGEIDRYAC-ENVNKLLVGN 123
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +E+VV + +FA YG FIE SAK NV++CF + I + + + E K
Sbjct: 124 KTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLADIQETPK 183
Query: 189 GLKKNIFKQKPPEADAAASGC 209
+ +I + ++ S C
Sbjct: 184 PDEVDIKSKNKTKSGGKKSFC 204
>sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1
PE=3 SV=1
Length = 203
Score = 182 bits (463), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 132/202 (65%), Gaps = 3/202 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S++VV FA E G F+E SAK NV+Q F + +I + + +K
Sbjct: 122 KSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTK 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ Q+ ++ +S CC
Sbjct: 182 AGGPVVRPQEGKPINSKSSSCC 203
>sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1
Length = 203
Score = 182 bits (463), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 119/170 (70%), Gaps = 3/170 (1%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
K D + +VV + FA E G F+E SAK NVQQ F + I D
Sbjct: 122 KSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKD 171
>sp|Q4R8X3|RAB1B_MACFA Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2
SV=1
Length = 201
Score = 182 bits (463), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT R+++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A GCC
Sbjct: 181 GERPNLKIDSTP-VKPAGGGCC 201
>sp|P10536|RAB1B_RAT Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1
Length = 201
Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 132/202 (65%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P +A+ GCC
Sbjct: 181 GERPNLKIDSTP-VKSASGGCC 201
>sp|Q9D1G1|RAB1B_MOUSE Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1
Length = 201
Score = 181 bits (459), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 131/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A+ GCC
Sbjct: 181 GERPNLKIDSTP-VKPASGGCC 201
>sp|Q5RE13|RAB1B_PONAB Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1
Length = 201
Score = 181 bits (458), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A GCC
Sbjct: 181 GERPNLKIDSTP-VKPAGGGCC 201
>sp|Q9H0U4|RAB1B_HUMAN Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1
Length = 201
Score = 181 bits (458), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A GCC
Sbjct: 181 GERPNLKIDSTP-VKPAGGGCC 201
>sp|P28188|RAD2A_ARATH Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1
SV=3
Length = 203
Score = 180 bits (457), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 128/202 (63%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F+ D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D R + + FA E G F+E SAK NV+Q F + I + + G+
Sbjct: 122 KSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNN 181
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
+ + P A +GCC
Sbjct: 182 ARPPTVQIRGQPVAQ--KNGCC 201
>sp|Q2HJH2|RAB1B_BOVIN Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1
Length = 201
Score = 180 bits (457), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A GCC
Sbjct: 181 GERPNLKIDSTP-VKQAGGGCC 201
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 180 bits (457), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 131/202 (64%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ E TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D RVV+ + G A E G F+E SAK NV++ F + +I + + ++ +
Sbjct: 122 KCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKN--RMASQPAT 179
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
K Q + A S CC
Sbjct: 180 NASKPATVQMRGQPVAQQSSCC 201
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1
Length = 205
Score = 180 bits (456), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 134/209 (64%), Gaps = 8/209 (3%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S ++DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +K
Sbjct: 2 STMNPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT--PS 181
LLVGNK D +++VV +A + G F+E SAK NV+Q F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPI 179
Query: 182 LLAEGSKGLKKNIFKQKPPEADAAASGCC 210
A SK K I P A+ GCC
Sbjct: 180 TAASDSKPSVK-INSSTPVSANKG--GCC 205
>sp|Q58DS5|RAB13_BOVIN Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1
Length = 203
Score = 179 bits (455), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 129/196 (65%), Gaps = 11/196 (5%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEELS-PTIGVDFKVKYVDVGGKKLKLAIW 67
+ +D+LFKLL+IGDSGVGK+ L++ F DNF TIG+DF+++ VD+ GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGS 187
NK D E++R V K++ ARE+G F E SAK+ +NV + F L I LL G
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI-----LLKSGG 175
Query: 188 KGLKKNIFKQKPPEAD 203
+ LK N KPP D
Sbjct: 176 RRLKNN---NKPPSTD 188
>sp|Q9SEH3|RAD2C_ARATH Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=1
SV=1
Length = 202
Score = 179 bits (455), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 130/203 (64%), Gaps = 8/203 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+ YDVT ++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-LDTPSLLAEGS 187
K D S++VV+ + FA E G F+E SAK NV++ F + I S A GS
Sbjct: 122 KCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGS 181
Query: 188 KGLKKNIFKQKPPEADAAASGCC 210
K I Q + SGCC
Sbjct: 182 KPPTVQIRGQPVNQ----QSGCC 200
>sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1
Length = 203
Score = 179 bits (454), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 131/205 (63%), Gaps = 9/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ V++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLAEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++VV + FA E G F+E SAK NV+Q F + +I + +A
Sbjct: 122 KSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI---KNRMASQPV 178
Query: 189 GLKKNIFKQKPPEA---DAAASGCC 210
K +P E + +S CC
Sbjct: 179 PPKPGGPVVRPTEGKPINNKSSSCC 203
>sp|Q9FPJ4|RAD2B_ARATH Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2
SV=1
Length = 202
Score = 179 bits (453), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 129/202 (63%), Gaps = 6/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D++ + TIGVDFK++ V+ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+ YDVT ++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D S++VV+ + FA E G F+E SAK NV++ F + I + +A
Sbjct: 122 KNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI---KTRMASQPA 178
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G K Q + SGCC
Sbjct: 179 GGAKPPTVQIRGQPVNQQSGCC 200
>sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1
PE=3 SV=1
Length = 201
Score = 178 bits (452), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 129/203 (63%), Gaps = 7/203 (3%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLHEIDRYAC-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D ++RVV+ FA G F+E SAK NV++ F + +I + K
Sbjct: 122 KSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPVAPK 181
Query: 189 -GLKKNIFKQKPPEADAAASGCC 210
G+K +Q P S CC
Sbjct: 182 AGVKLTPGQQVPSN---GGSKCC 201
>sp|Q9TVU5|RAB1_THEPA Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1
Length = 220
Score = 178 bits (451), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 119/171 (69%), Gaps = 2/171 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIW 67
+E+DYLFK+++IGDSG GKSSLLL F + + E TIGVDFK+K V + +KL IW
Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIW 61
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TS+YYRGA GII VYDVT + +F ++++ W ++ID Y+T+ C KLL+G
Sbjct: 62 DTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
NK+D RVV+ E + A + +IE SAKT NV++ F + + D
Sbjct: 121 NKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKD 171
>sp|P41924|RYL1_YARLI Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RYL1 PE=3 SV=1
Length = 203
Score = 177 bits (450), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 140/210 (66%), Gaps = 12/210 (5%)
Query: 5 SASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLK 63
S SQ+ +D L KLL+IGDSGVGKS LLL F D F TIG+DFK++ +D+G +++K
Sbjct: 2 SHSQRTYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVK 61
Query: 64 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK 123
L +WDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + + Y+ N+
Sbjct: 62 LQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIEN-WYQNVQSYA-NEGVEL 119
Query: 124 LLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 183
+LVGNK D + +RVV+ ++G A ++G F+E S+KT +NV++CF + +I DT +
Sbjct: 120 ILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKT 179
Query: 184 ---AEGSKGLKKNIFKQKPPEADAAASGCC 210
GS G+ NI + + + +AS CC
Sbjct: 180 KGNESGSGGI--NIAEGE----ENSASKCC 203
>sp|Q06AU7|RAB1B_PIG Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1
Length = 201
Score = 177 bits (448), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQER RT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSK 188
K D +++VV FA G F+E SAK NV+Q F + +I A S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASG 180
Query: 189 GLKKNIFKQKPPEADAAASGCC 210
G + N+ P A GCC
Sbjct: 181 GERPNLKIDSTP-VKQAGGGCC 201
>sp|Q4UB16|RAB1_THEAN Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1
Length = 220
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 118/171 (69%), Gaps = 2/171 (1%)
Query: 9 QEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLAIW 67
+E+DYLFK+++IGDSG GKSSLLL F + + E TIGVDFK+K V + +KL IW
Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIW 61
Query: 68 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVG 127
DTAGQERFRT+TS+YYRGA GII VYDVT + +F ++++ W ++ID Y+T+ C KLL+G
Sbjct: 62 DTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIG 120
Query: 128 NKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 178
NK+D RVV E + A + +IE SAKT NV++ F + + D
Sbjct: 121 NKIDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKD 171
>sp|P22127|RAB10_DIPOM Ras-related protein Rab-10 OS=Diplobatis ommata PE=2 SV=1
Length = 200
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 123/176 (69%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TP 180
+GNK D E +RVV K +G ARE+ F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQKTP 175
>sp|Q5ZIT5|RAB10_CHICK Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1
Length = 200
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 123/176 (69%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+D K+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D E +RVV K +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>sp|P63012|RAB3A_RAT Ras-related protein Rab-3A OS=Rattus norvegicus GN=Rab3a PE=1 SV=1
Length = 220
Score = 175 bits (443), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 192 DTADPAVTGAKQGPQLTDQQAPPHQDCA 219
>sp|Q06AU3|RAB3A_PIG Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1
Length = 220
Score = 175 bits (443), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 192 DTADPAVTGAKQGPQLTDQQAPPHQDCA 219
>sp|P63011|RAB3A_MOUSE Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1
Length = 220
Score = 175 bits (443), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 192 DTADPAVTGAKQGPQLTDQQAPPHQDCA 219
>sp|P11023|RAB3A_BOVIN Ras-related protein Rab-3A OS=Bos taurus GN=RAB3A PE=1 SV=3
Length = 220
Score = 174 bits (442), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 6 ASQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKL 64
+S Q FDY+FK+L+IG+S VGK+S L + D+F T+G+DFKVK + K++KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 73
Query: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKL 124
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 131
Query: 125 LVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI-------L 177
LVGNK D E ERVV+ + G A G F E SAK +NV+Q FE LV I L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
Query: 178 DTPSLLAEGSKGLKKNIFKQKPPEADAA 205
DT G+K + +Q PP D A
Sbjct: 192 DTADPAVTGAKQGPQLTDQQAPPHQDCA 219
>sp|P33723|YPT1_NEUCR GTP-binding protein ypt1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ypt-1
PE=3 SV=1
Length = 203
Score = 174 bits (442), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 130/205 (63%), Gaps = 9/205 (4%)
Query: 10 EFDYLFKLLMIGDSGVGKSSLLLSFTSDNF-EELSPTIGVDFKVKYVDVGGKKLKLAIWD 68
E+DYLFKLL+IGDSGVGKS LLL F D + E TIGVDFK++ +++ GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 69 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGN 128
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 129 KVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD-TPSLLAEGS 187
K D ++VV FA G F+E SAK NV+Q F + +I + S +A +
Sbjct: 122 KSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNN 181
Query: 188 KGLKKNIFKQKPPE--ADAAASGCC 210
N+ P ++ ++ GCC
Sbjct: 182 TKASVNV---SPGHGVSNNSSGGCC 203
>sp|Q5R5U1|RAB10_PONAB Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1
Length = 200
Score = 174 bits (442), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 7 SQQEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEE-LSPTIGVDFKVKYVDVGGKKLKLA 65
+++ +D LFKLL+IGDSGVGK+ +L F+ D F TIG+DFK+K V++ GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLL 125
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+S W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 126 VGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-DTP 180
+GNK D + +RVV K +G ARE+G F E SAK +N+++ F L IL TP
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,995,580
Number of Sequences: 539616
Number of extensions: 2945421
Number of successful extensions: 14281
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 462
Number of HSP's that attempted gapping in prelim test: 11520
Number of HSP's gapped (non-prelim): 1531
length of query: 210
length of database: 191,569,459
effective HSP length: 112
effective length of query: 98
effective length of database: 131,132,467
effective search space: 12850981766
effective search space used: 12850981766
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)