Query 028335
Match_columns 210
No_of_seqs 319 out of 2217
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 16:17:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028335.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028335hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bzb_A Uncharacterized protein 99.6 5E-16 1.7E-20 129.9 10.0 113 92-208 53-176 (281)
2 3dmg_A Probable ribosomal RNA 99.3 1.1E-10 3.9E-15 101.6 15.5 123 68-206 186-309 (381)
3 3lpm_A Putative methyltransfer 99.2 2.6E-11 9E-16 99.7 8.9 109 75-204 17-128 (259)
4 4hc4_A Protein arginine N-meth 99.2 2.4E-11 8.2E-16 105.7 8.1 76 118-201 79-155 (376)
5 2nxc_A L11 mtase, ribosomal pr 99.2 2.4E-11 8.3E-16 99.9 6.9 87 100-202 104-191 (254)
6 4dcm_A Ribosomal RNA large sub 99.2 2.4E-10 8.2E-15 99.4 11.9 116 72-206 185-303 (375)
7 1nkv_A Hypothetical protein YJ 99.1 3E-10 1E-14 92.3 11.1 80 120-207 34-115 (256)
8 1xxl_A YCGJ protein; structura 99.1 3E-10 1E-14 91.9 11.0 92 100-207 7-99 (239)
9 3mti_A RRNA methylase; SAM-dep 99.1 2.7E-10 9.3E-15 88.3 9.8 75 121-202 21-96 (185)
10 3kr9_A SAM-dependent methyltra 99.1 2.6E-10 9E-15 92.5 8.9 75 122-203 15-92 (225)
11 3f4k_A Putative methyltransfer 99.1 5.2E-10 1.8E-14 90.9 10.7 80 121-207 45-126 (257)
12 3gnl_A Uncharacterized protein 99.1 2.7E-10 9.4E-15 93.4 8.8 75 121-202 20-97 (244)
13 3kkz_A Uncharacterized protein 99.1 5.1E-10 1.8E-14 91.9 10.3 80 121-207 45-126 (267)
14 3jwg_A HEN1, methyltransferase 99.1 7.4E-10 2.5E-14 88.1 10.9 99 102-207 13-114 (219)
15 1dus_A MJ0882; hypothetical pr 99.1 2.3E-09 7.7E-14 82.8 13.3 116 71-206 14-130 (194)
16 3vc1_A Geranyl diphosphate 2-C 99.1 5.5E-10 1.9E-14 94.1 10.5 81 120-207 115-197 (312)
17 3lec_A NADB-rossmann superfami 99.1 3.6E-10 1.2E-14 92.0 9.0 76 121-203 20-98 (230)
18 3fzg_A 16S rRNA methylase; met 99.1 9.5E-11 3.3E-15 92.7 5.4 76 121-206 48-126 (200)
19 4azs_A Methyltransferase WBDD; 99.1 7.8E-11 2.7E-15 107.5 5.5 80 122-207 66-146 (569)
20 4gek_A TRNA (CMO5U34)-methyltr 99.1 8.3E-10 2.8E-14 91.3 10.7 78 121-207 69-151 (261)
21 3gdh_A Trimethylguanosine synt 99.1 3.7E-10 1.3E-14 91.3 8.3 78 121-206 77-155 (241)
22 2xvm_A Tellurite resistance pr 99.1 8E-10 2.7E-14 86.1 9.7 78 121-207 31-109 (199)
23 3jwh_A HEN1; methyltransferase 99.1 1.2E-09 3.9E-14 87.0 10.7 84 121-207 28-114 (217)
24 2yxd_A Probable cobalt-precorr 99.1 6.4E-10 2.2E-14 85.3 8.9 88 104-204 21-109 (183)
25 3m70_A Tellurite resistance pr 99.1 6E-10 2.1E-14 92.4 9.4 77 121-207 119-196 (286)
26 3bus_A REBM, methyltransferase 99.0 1.5E-09 5.1E-14 89.1 11.6 95 102-207 45-141 (273)
27 3hem_A Cyclopropane-fatty-acyl 99.0 1.2E-09 4.1E-14 91.4 11.2 78 120-207 70-149 (302)
28 3sm3_A SAM-dependent methyltra 99.0 6.2E-10 2.1E-14 88.9 9.0 84 121-207 29-113 (235)
29 3iv6_A Putative Zn-dependent a 99.0 3.3E-10 1.1E-14 93.9 7.5 76 120-206 43-121 (261)
30 3grz_A L11 mtase, ribosomal pr 99.0 3.7E-09 1.3E-13 83.3 13.1 89 100-204 44-134 (205)
31 3dlc_A Putative S-adenosyl-L-m 99.0 9.8E-10 3.3E-14 86.6 9.7 79 122-207 43-123 (219)
32 3lbf_A Protein-L-isoaspartate 99.0 1.1E-09 3.7E-14 86.6 10.0 78 121-206 76-154 (210)
33 4htf_A S-adenosylmethionine-de 99.0 8.2E-10 2.8E-14 91.5 9.6 80 122-207 68-148 (285)
34 3ofk_A Nodulation protein S; N 99.0 4.4E-10 1.5E-14 89.1 7.7 76 121-207 50-126 (216)
35 2o57_A Putative sarcosine dime 99.0 1.9E-09 6.5E-14 89.7 11.9 80 121-207 81-162 (297)
36 3njr_A Precorrin-6Y methylase; 99.0 1.4E-09 4.7E-14 86.5 10.5 76 121-203 54-130 (204)
37 3q7e_A Protein arginine N-meth 99.0 1.3E-09 4.4E-14 93.7 11.0 78 120-204 64-142 (349)
38 3p9n_A Possible methyltransfer 99.0 4.9E-10 1.7E-14 87.5 7.7 78 121-204 43-122 (189)
39 3g89_A Ribosomal RNA small sub 99.0 4E-10 1.4E-14 92.6 7.2 77 122-203 80-159 (249)
40 3lcc_A Putative methyl chlorid 99.0 4.8E-10 1.6E-14 90.3 7.4 79 121-207 65-144 (235)
41 1vl5_A Unknown conserved prote 99.0 1.3E-09 4.5E-14 89.0 9.9 79 121-207 36-115 (260)
42 3e05_A Precorrin-6Y C5,15-meth 99.0 2.3E-09 7.7E-14 84.5 10.9 77 121-205 39-118 (204)
43 1ve3_A Hypothetical protein PH 99.0 3.2E-09 1.1E-13 84.4 11.9 74 122-204 38-112 (227)
44 2fyt_A Protein arginine N-meth 99.0 2.7E-09 9.3E-14 91.4 11.8 78 120-204 62-140 (340)
45 2frn_A Hypothetical protein PH 99.0 6.4E-10 2.2E-14 92.6 7.7 73 122-202 125-199 (278)
46 2ozv_A Hypothetical protein AT 99.0 4E-10 1.4E-14 92.9 6.2 91 101-203 23-123 (260)
47 3dh0_A SAM dependent methyltra 99.0 1.7E-09 5.7E-14 85.9 9.6 79 121-207 36-118 (219)
48 3evz_A Methyltransferase; NYSG 99.0 1.9E-09 6.4E-14 86.4 9.9 74 121-202 54-130 (230)
49 1nv8_A HEMK protein; class I a 99.0 2E-09 7E-14 90.0 10.3 87 103-202 108-199 (284)
50 2h00_A Methyltransferase 10 do 99.0 3.1E-09 1E-13 86.7 10.9 79 122-204 65-149 (254)
51 1uwv_A 23S rRNA (uracil-5-)-me 99.0 5.8E-09 2E-13 92.1 13.4 90 103-201 271-362 (433)
52 1yzh_A TRNA (guanine-N(7)-)-me 99.0 3.2E-09 1.1E-13 84.4 10.5 75 122-202 41-118 (214)
53 1kpg_A CFA synthase;, cyclopro 99.0 3.4E-09 1.2E-13 87.7 10.8 78 120-207 62-141 (287)
54 3ujc_A Phosphoethanolamine N-m 99.0 1.6E-09 5.5E-14 88.1 8.5 93 101-207 38-132 (266)
55 3r0q_C Probable protein argini 99.0 2.3E-09 7.8E-14 93.0 9.7 79 120-206 61-140 (376)
56 3hm2_A Precorrin-6Y C5,15-meth 98.9 1.7E-09 5.9E-14 82.8 7.7 78 121-207 24-106 (178)
57 1g6q_1 HnRNP arginine N-methyl 98.9 4.5E-09 1.6E-13 89.5 11.0 78 120-204 36-114 (328)
58 3g5t_A Trans-aconitate 3-methy 98.9 3E-09 1E-13 88.9 9.3 79 122-207 36-125 (299)
59 1xdz_A Methyltransferase GIDB; 98.9 1.1E-09 3.9E-14 88.7 6.6 77 122-203 70-149 (240)
60 2fpo_A Methylase YHHF; structu 98.9 8.7E-10 3E-14 87.4 5.7 76 122-204 54-131 (202)
61 2fk8_A Methoxy mycolic acid sy 98.9 5.1E-09 1.7E-13 88.1 10.7 78 120-207 88-167 (318)
62 3k6r_A Putative transferase PH 98.9 1.7E-09 5.7E-14 90.4 7.6 75 121-203 124-200 (278)
63 3g07_A 7SK snRNA methylphospha 98.9 1.7E-09 5.7E-14 90.5 7.5 48 120-167 44-94 (292)
64 2fhp_A Methylase, putative; al 98.9 9.5E-10 3.3E-14 84.9 5.6 80 121-204 43-125 (187)
65 3mgg_A Methyltransferase; NYSG 98.9 3.6E-09 1.2E-13 87.0 9.3 80 120-207 35-117 (276)
66 1pjz_A Thiopurine S-methyltran 98.9 1E-09 3.5E-14 87.0 5.8 95 104-206 9-112 (203)
67 3thr_A Glycine N-methyltransfe 98.9 1.1E-09 3.7E-14 90.9 6.1 84 122-206 57-142 (293)
68 3e23_A Uncharacterized protein 98.9 3.3E-09 1.1E-13 83.8 8.6 72 121-207 42-114 (211)
69 2ift_A Putative methylase HI07 98.9 1.5E-09 5.1E-14 85.9 6.5 79 122-204 53-134 (201)
70 2yqz_A Hypothetical protein TT 98.9 2.8E-09 9.6E-14 86.6 8.2 78 121-207 38-116 (263)
71 2esr_A Methyltransferase; stru 98.9 8E-10 2.7E-14 85.1 4.7 78 121-204 30-109 (177)
72 4hg2_A Methyltransferase type 98.9 1.2E-09 3.9E-14 90.3 5.9 82 106-207 29-111 (257)
73 3u81_A Catechol O-methyltransf 98.9 4.3E-09 1.5E-13 84.2 9.1 79 121-203 57-142 (221)
74 2p8j_A S-adenosylmethionine-de 98.9 4.4E-09 1.5E-13 82.7 9.0 78 121-207 22-101 (209)
75 2y1w_A Histone-arginine methyl 98.9 9.8E-09 3.3E-13 88.1 11.7 79 120-206 48-127 (348)
76 1jsx_A Glucose-inhibited divis 98.9 5E-09 1.7E-13 82.4 9.1 73 122-203 65-140 (207)
77 3g5l_A Putative S-adenosylmeth 98.9 3.2E-09 1.1E-13 86.2 7.9 76 121-207 43-120 (253)
78 3l8d_A Methyltransferase; stru 98.9 1.9E-09 6.6E-14 86.7 6.4 75 122-207 53-128 (242)
79 3ou2_A SAM-dependent methyltra 98.9 4.4E-09 1.5E-13 83.0 8.4 74 121-207 45-119 (218)
80 2kw5_A SLR1183 protein; struct 98.9 1.4E-08 4.6E-13 79.6 11.1 73 122-204 30-103 (202)
81 3eey_A Putative rRNA methylase 98.9 3.2E-09 1.1E-13 83.0 7.2 77 121-203 21-101 (197)
82 1l3i_A Precorrin-6Y methyltran 98.9 5E-09 1.7E-13 80.7 8.2 79 120-205 31-110 (192)
83 3bt7_A TRNA (uracil-5-)-methyl 98.9 4.7E-09 1.6E-13 90.8 8.9 91 76-182 178-269 (369)
84 1ri5_A MRNA capping enzyme; me 98.9 5.2E-09 1.8E-13 86.6 8.8 80 121-207 63-145 (298)
85 2b3t_A Protein methyltransfera 98.9 8.9E-09 3E-13 85.2 10.1 87 102-202 94-183 (276)
86 3tfw_A Putative O-methyltransf 98.9 5.5E-09 1.9E-13 85.4 8.7 77 121-201 62-142 (248)
87 1vbf_A 231AA long hypothetical 98.9 7.9E-09 2.7E-13 82.7 9.4 77 121-207 69-146 (231)
88 3ntv_A MW1564 protein; rossman 98.9 6.2E-09 2.1E-13 84.1 8.8 76 121-201 70-148 (232)
89 3m33_A Uncharacterized protein 98.9 1.6E-08 5.4E-13 81.1 10.9 70 121-202 47-118 (226)
90 2yxe_A Protein-L-isoaspartate 98.9 1.5E-08 5.3E-13 80.2 10.7 78 121-206 76-157 (215)
91 2ex4_A Adrenal gland protein A 98.9 6.7E-09 2.3E-13 83.9 8.8 78 122-207 79-158 (241)
92 2p7i_A Hypothetical protein; p 98.9 2.2E-09 7.4E-14 86.2 5.8 74 121-207 41-115 (250)
93 3a27_A TYW2, uncharacterized p 98.9 4.9E-09 1.7E-13 87.0 8.1 73 121-202 118-193 (272)
94 3b3j_A Histone-arginine methyl 98.9 1.5E-08 5E-13 90.8 11.6 79 120-206 156-235 (480)
95 1ws6_A Methyltransferase; stru 98.9 1.5E-09 5.2E-14 82.5 4.4 77 122-204 41-119 (171)
96 1wy7_A Hypothetical protein PH 98.9 1.5E-08 5.1E-13 79.8 10.2 72 121-204 48-121 (207)
97 3bkx_A SAM-dependent methyltra 98.9 4.2E-09 1.4E-13 86.5 7.3 82 121-207 42-134 (275)
98 3hnr_A Probable methyltransfer 98.9 7.7E-09 2.6E-13 82.0 8.5 73 122-207 45-118 (220)
99 2jjq_A Uncharacterized RNA met 98.9 4.1E-08 1.4E-12 86.6 13.9 70 121-201 289-359 (425)
100 3pfg_A N-methyltransferase; N, 98.9 9.4E-09 3.2E-13 84.0 9.2 71 122-206 50-122 (263)
101 3dtn_A Putative methyltransfer 98.9 5.9E-09 2E-13 83.5 7.8 76 121-207 43-121 (234)
102 2gb4_A Thiopurine S-methyltran 98.8 7.8E-09 2.7E-13 85.0 8.5 95 104-205 54-162 (252)
103 3h2b_A SAM-dependent methyltra 98.8 6.4E-09 2.2E-13 81.6 7.6 73 122-207 41-114 (203)
104 3gu3_A Methyltransferase; alph 98.8 1.4E-08 4.8E-13 84.3 9.9 78 120-207 20-101 (284)
105 1wzn_A SAM-dependent methyltra 98.8 1.3E-08 4.4E-13 82.5 9.3 71 122-202 41-112 (252)
106 4fsd_A Arsenic methyltransfera 98.8 1.2E-08 4E-13 88.6 9.4 88 120-207 81-178 (383)
107 1y8c_A S-adenosylmethionine-de 98.8 7.3E-09 2.5E-13 83.1 7.5 76 122-207 37-114 (246)
108 3ege_A Putative methyltransfer 98.8 4.1E-09 1.4E-13 86.4 6.1 85 105-207 21-106 (261)
109 1jg1_A PIMT;, protein-L-isoasp 98.8 1.3E-08 4.3E-13 82.2 8.9 78 121-206 90-169 (235)
110 3duw_A OMT, O-methyltransferas 98.8 6.3E-09 2.2E-13 83.0 7.0 77 121-201 57-139 (223)
111 3i9f_A Putative type 11 methyl 98.8 2.7E-09 9.4E-14 81.4 4.5 71 121-207 16-87 (170)
112 3mb5_A SAM-dependent methyltra 98.8 1.9E-08 6.5E-13 81.8 9.7 73 121-201 92-168 (255)
113 3bkw_A MLL3908 protein, S-aden 98.8 3.8E-09 1.3E-13 84.9 5.4 76 121-207 42-119 (243)
114 2fca_A TRNA (guanine-N(7)-)-me 98.8 7.7E-09 2.6E-13 82.6 7.1 75 122-202 38-115 (213)
115 2igt_A SAM dependent methyltra 98.8 2.9E-09 9.8E-14 91.1 4.8 77 122-201 153-231 (332)
116 1dl5_A Protein-L-isoaspartate 98.8 1.6E-08 5.4E-13 85.6 9.2 78 121-206 74-155 (317)
117 3tr6_A O-methyltransferase; ce 98.8 7.3E-09 2.5E-13 82.6 6.7 77 121-201 63-146 (225)
118 4df3_A Fibrillarin-like rRNA/T 98.8 2E-08 6.7E-13 81.8 9.2 102 95-205 50-156 (233)
119 2a14_A Indolethylamine N-methy 98.8 3.4E-09 1.2E-13 87.2 4.7 47 120-166 53-101 (263)
120 2pxx_A Uncharacterized protein 98.8 1.7E-08 5.8E-13 79.3 8.5 85 105-205 31-117 (215)
121 3frh_A 16S rRNA methylase; met 98.8 2.6E-08 8.8E-13 81.5 9.7 73 122-205 105-178 (253)
122 2gpy_A O-methyltransferase; st 98.8 1.5E-08 5.1E-13 81.5 8.2 79 122-204 54-135 (233)
123 2pjd_A Ribosomal RNA small sub 98.8 1.9E-08 6.3E-13 86.1 9.0 74 122-206 196-272 (343)
124 3e8s_A Putative SAM dependent 98.8 5.7E-09 2E-13 82.6 5.3 75 121-206 51-127 (227)
125 3g2m_A PCZA361.24; SAM-depende 98.8 1.9E-08 6.4E-13 83.9 8.7 75 122-202 82-157 (299)
126 2i62_A Nicotinamide N-methyltr 98.8 2.9E-09 9.8E-14 86.7 3.5 86 121-206 55-168 (265)
127 3d2l_A SAM-dependent methyltra 98.8 3.3E-08 1.1E-12 79.3 9.7 74 122-206 33-108 (243)
128 1zx0_A Guanidinoacetate N-meth 98.8 4.4E-09 1.5E-13 84.9 4.5 73 122-201 60-134 (236)
129 2b78_A Hypothetical protein SM 98.8 3.3E-09 1.1E-13 92.4 3.9 77 121-201 211-291 (385)
130 2yx1_A Hypothetical protein MJ 98.8 1.5E-08 5E-13 86.7 7.8 69 122-201 195-264 (336)
131 3ll7_A Putative methyltransfer 98.8 7E-09 2.4E-13 91.0 5.9 74 122-201 93-169 (410)
132 2p35_A Trans-aconitate 2-methy 98.8 2E-08 6.9E-13 81.4 8.1 73 121-207 32-107 (259)
133 3q87_B N6 adenine specific DNA 98.8 2.5E-08 8.5E-13 76.8 8.3 80 101-205 8-88 (170)
134 2h1r_A Dimethyladenosine trans 98.8 3.2E-08 1.1E-12 83.2 9.5 75 121-206 41-116 (299)
135 3lcv_B Sisomicin-gentamicin re 98.8 1.1E-08 3.8E-13 84.5 6.4 74 122-205 132-208 (281)
136 4dmg_A Putative uncharacterize 98.8 8.5E-09 2.9E-13 90.1 6.1 48 122-169 214-262 (393)
137 3tm4_A TRNA (guanine N2-)-meth 98.8 1.7E-08 5.8E-13 87.5 8.0 74 121-201 216-292 (373)
138 3orh_A Guanidinoacetate N-meth 98.7 8.2E-09 2.8E-13 83.7 5.5 73 122-201 60-134 (236)
139 1yb2_A Hypothetical protein TA 98.7 3.1E-08 1.1E-12 81.9 9.0 72 121-201 109-185 (275)
140 3cgg_A SAM-dependent methyltra 98.7 3.8E-08 1.3E-12 75.9 8.9 72 122-206 46-119 (195)
141 2avn_A Ubiquinone/menaquinone 98.7 2E-08 6.9E-13 82.1 7.5 71 122-206 54-125 (260)
142 1zq9_A Probable dimethyladenos 98.7 5.3E-08 1.8E-12 81.3 10.2 73 121-202 27-100 (285)
143 3dxy_A TRNA (guanine-N(7)-)-me 98.7 7.4E-09 2.5E-13 83.2 4.7 76 122-202 34-112 (218)
144 1o54_A SAM-dependent O-methylt 98.7 4.3E-08 1.5E-12 81.0 9.5 73 121-201 111-187 (277)
145 1ne2_A Hypothetical protein TA 98.7 2.8E-08 9.6E-13 77.9 7.9 69 121-205 50-120 (200)
146 1xtp_A LMAJ004091AAA; SGPP, st 98.7 1.8E-08 6.1E-13 81.5 6.8 77 121-207 92-170 (254)
147 2pbf_A Protein-L-isoaspartate 98.7 3.8E-08 1.3E-12 78.6 8.6 85 121-205 79-172 (227)
148 2vdv_E TRNA (guanine-N(7)-)-me 98.7 5.3E-08 1.8E-12 79.1 9.6 80 122-201 49-134 (246)
149 3htx_A HEN1; HEN1, small RNA m 98.7 8.2E-08 2.8E-12 90.4 11.9 84 121-207 720-808 (950)
150 4dzr_A Protein-(glutamine-N5) 98.7 2.5E-09 8.5E-14 84.0 1.4 91 103-202 14-108 (215)
151 2yvl_A TRMI protein, hypotheti 98.7 6.8E-08 2.3E-12 77.9 9.9 75 121-202 90-165 (248)
152 3fpf_A Mtnas, putative unchara 98.7 6.2E-08 2.1E-12 81.5 9.9 74 120-203 120-196 (298)
153 2pwy_A TRNA (adenine-N(1)-)-me 98.7 9E-08 3.1E-12 77.6 10.7 73 121-201 95-172 (258)
154 3c3p_A Methyltransferase; NP_9 98.7 3.2E-08 1.1E-12 78.3 7.8 73 122-201 56-132 (210)
155 2r6z_A UPF0341 protein in RSP 98.7 3.2E-09 1.1E-13 87.7 1.9 76 122-202 83-168 (258)
156 3ccf_A Cyclopropane-fatty-acyl 98.7 3.7E-08 1.3E-12 81.2 8.3 73 121-207 56-129 (279)
157 3ocj_A Putative exported prote 98.7 1.1E-08 3.8E-13 85.7 5.1 80 120-207 116-199 (305)
158 3gru_A Dimethyladenosine trans 98.7 9.7E-08 3.3E-12 80.3 10.9 76 121-207 49-125 (295)
159 3dli_A Methyltransferase; PSI- 98.7 9.7E-09 3.3E-13 82.9 4.5 73 121-207 40-113 (240)
160 2hnk_A SAM-dependent O-methylt 98.7 1.8E-08 6E-13 81.5 5.7 58 121-182 59-120 (239)
161 1o9g_A RRNA methyltransferase; 98.7 2.6E-08 8.8E-13 81.1 6.8 45 122-166 51-100 (250)
162 1sui_A Caffeoyl-COA O-methyltr 98.7 1.7E-08 5.9E-13 82.5 5.6 76 121-201 78-162 (247)
163 1i1n_A Protein-L-isoaspartate 98.7 5.6E-08 1.9E-12 77.6 8.5 82 121-205 76-161 (226)
164 2avd_A Catechol-O-methyltransf 98.7 1.8E-08 6.1E-13 80.6 5.3 77 121-202 68-152 (229)
165 1nt2_A Fibrillarin-like PRE-rR 98.7 6.4E-08 2.2E-12 77.2 8.5 75 121-202 56-133 (210)
166 2ipx_A RRNA 2'-O-methyltransfe 98.7 6E-08 2.1E-12 78.0 8.4 75 120-201 75-153 (233)
167 3ggd_A SAM-dependent methyltra 98.7 2.2E-08 7.6E-13 80.8 5.6 79 121-207 55-136 (245)
168 3dr5_A Putative O-methyltransf 98.7 2E-08 6.7E-13 80.9 5.2 75 123-201 57-135 (221)
169 2r3s_A Uncharacterized protein 98.7 9.2E-08 3.2E-12 80.7 9.6 79 121-207 164-244 (335)
170 3bxo_A N,N-dimethyltransferase 98.7 1E-07 3.4E-12 76.3 9.3 72 121-206 39-112 (239)
171 3bgv_A MRNA CAP guanine-N7 met 98.6 1.9E-07 6.5E-12 78.3 11.2 86 122-207 34-126 (313)
172 3c0k_A UPF0064 protein YCCW; P 98.6 1.4E-08 4.6E-13 88.6 4.2 78 121-202 219-300 (396)
173 1fbn_A MJ fibrillarin homologu 98.6 6E-08 2.1E-12 78.0 7.6 72 121-200 73-148 (230)
174 3tqs_A Ribosomal RNA small sub 98.6 9.5E-08 3.2E-12 78.8 8.9 58 121-185 28-86 (255)
175 3v97_A Ribosomal RNA large sub 98.6 2.9E-08 9.9E-13 92.7 6.2 76 121-201 538-615 (703)
176 1qzz_A RDMB, aclacinomycin-10- 98.6 1.3E-07 4.6E-12 81.1 9.9 77 122-207 182-260 (374)
177 3ckk_A TRNA (guanine-N(7)-)-me 98.6 6.7E-08 2.3E-12 78.5 7.5 80 122-201 46-129 (235)
178 2as0_A Hypothetical protein PH 98.6 1.6E-08 5.6E-13 88.0 4.0 76 122-201 217-295 (396)
179 1g8a_A Fibrillarin-like PRE-rR 98.6 9E-08 3.1E-12 76.5 7.9 75 121-202 72-150 (227)
180 2vdw_A Vaccinia virus capping 98.6 1.1E-07 3.9E-12 80.0 8.7 85 122-206 48-140 (302)
181 2gs9_A Hypothetical protein TT 98.6 6.4E-08 2.2E-12 76.2 6.7 70 122-207 36-107 (211)
182 3c3y_A Pfomt, O-methyltransfer 98.6 5.6E-08 1.9E-12 78.8 6.5 76 121-201 69-153 (237)
183 1i9g_A Hypothetical protein RV 98.6 2.2E-07 7.7E-12 76.4 10.3 74 121-201 98-177 (280)
184 3cbg_A O-methyltransferase; cy 98.6 4.9E-08 1.7E-12 78.8 6.0 78 121-202 71-155 (232)
185 3r3h_A O-methyltransferase, SA 98.6 8.7E-09 3E-13 84.0 1.6 77 121-201 59-142 (242)
186 3cc8_A Putative methyltransfer 98.6 6E-08 2E-12 76.8 6.4 73 122-207 32-105 (230)
187 3tma_A Methyltransferase; thum 98.6 1.2E-07 4E-12 81.3 8.6 73 121-201 202-278 (354)
188 3gwz_A MMCR; methyltransferase 98.6 2.5E-07 8.5E-12 79.7 10.7 77 122-207 202-280 (369)
189 1r18_A Protein-L-isoaspartate( 98.6 8.5E-08 2.9E-12 76.8 7.1 83 121-206 83-174 (227)
190 3dp7_A SAM-dependent methyltra 98.6 1.8E-07 6.2E-12 80.4 9.6 80 122-207 179-260 (363)
191 1ixk_A Methyltransferase; open 98.6 1.2E-07 4E-12 80.3 8.3 73 121-201 117-193 (315)
192 3i53_A O-methyltransferase; CO 98.6 2.2E-07 7.6E-12 78.6 10.0 77 122-207 169-247 (332)
193 2b25_A Hypothetical protein; s 98.6 3.8E-07 1.3E-11 77.4 11.4 81 120-202 103-194 (336)
194 1tw3_A COMT, carminomycin 4-O- 98.6 2.1E-07 7.2E-12 79.5 9.3 77 122-207 183-261 (360)
195 3mcz_A O-methyltransferase; ad 98.6 1.8E-07 6.1E-12 79.7 8.5 79 123-207 180-260 (352)
196 1x19_A CRTF-related protein; m 98.5 3.7E-07 1.3E-11 78.1 10.0 78 121-207 189-268 (359)
197 1u2z_A Histone-lysine N-methyl 98.5 1.6E-07 5.4E-12 83.0 7.7 83 121-206 241-334 (433)
198 1wxx_A TT1595, hypothetical pr 98.5 5.9E-08 2E-12 84.2 4.9 75 122-201 209-285 (382)
199 3adn_A Spermidine synthase; am 98.5 1.8E-07 6.3E-12 78.5 7.7 78 122-201 83-163 (294)
200 2qm3_A Predicted methyltransfe 98.5 3.4E-07 1.2E-11 79.1 9.6 75 121-202 171-248 (373)
201 2dul_A N(2),N(2)-dimethylguano 98.5 7.8E-08 2.7E-12 83.6 5.0 45 122-166 47-94 (378)
202 2g72_A Phenylethanolamine N-me 98.5 8.9E-08 3E-12 79.4 4.9 44 121-164 70-115 (289)
203 2b9e_A NOL1/NOP2/SUN domain fa 98.5 5.2E-07 1.8E-11 76.3 9.5 76 121-201 101-180 (309)
204 3ldu_A Putative methylase; str 98.5 3.4E-07 1.1E-11 79.7 8.5 74 121-202 194-308 (385)
205 1p91_A Ribosomal RNA large sub 98.5 4E-07 1.4E-11 74.4 8.3 70 122-204 85-157 (269)
206 2ip2_A Probable phenazine-spec 98.5 2.7E-07 9.2E-12 78.1 7.4 75 124-207 169-245 (334)
207 3ajd_A Putative methyltransfer 98.5 2.7E-07 9.1E-12 76.4 7.2 76 121-202 82-163 (274)
208 3axs_A Probable N(2),N(2)-dime 98.5 8.1E-08 2.8E-12 83.9 4.0 75 122-201 52-131 (392)
209 3k0b_A Predicted N6-adenine-sp 98.5 4.4E-07 1.5E-11 79.2 8.5 74 121-202 200-314 (393)
210 3uwp_A Histone-lysine N-methyl 98.4 6.1E-07 2.1E-11 78.7 8.5 81 120-206 171-263 (438)
211 3fut_A Dimethyladenosine trans 98.4 2E-07 6.7E-12 77.6 5.0 43 121-164 46-89 (271)
212 1qam_A ERMC' methyltransferase 98.4 4.2E-07 1.4E-11 74.1 6.9 44 121-164 29-73 (244)
213 3id6_C Fibrillarin-like rRNA/T 98.4 9.3E-07 3.2E-11 71.8 8.8 98 97-202 51-153 (232)
214 3ldg_A Putative uncharacterize 98.4 8.4E-07 2.9E-11 77.2 9.0 74 121-202 193-307 (384)
215 2aot_A HMT, histamine N-methyl 98.4 2.7E-07 9.3E-12 76.7 5.3 78 122-207 52-147 (292)
216 2frx_A Hypothetical protein YE 98.4 6.4E-07 2.2E-11 80.1 7.9 73 122-201 117-193 (479)
217 3m4x_A NOL1/NOP2/SUN family pr 98.4 2.8E-07 9.5E-12 82.0 5.2 86 101-201 92-181 (456)
218 1af7_A Chemotaxis receptor met 98.4 1.7E-07 5.8E-12 78.0 3.3 81 122-205 105-223 (274)
219 2bm8_A Cephalosporin hydroxyla 98.4 5.5E-07 1.9E-11 73.0 6.2 71 122-202 81-159 (236)
220 2yxl_A PH0851 protein, 450AA l 98.4 2E-06 6.9E-11 76.1 10.4 75 121-201 258-336 (450)
221 3p2e_A 16S rRNA methylase; met 98.4 2.3E-07 7.7E-12 74.8 3.8 58 122-184 24-88 (225)
222 1xj5_A Spermidine synthase 1; 98.3 4.1E-07 1.4E-11 77.8 5.4 76 122-201 120-200 (334)
223 3opn_A Putative hemolysin; str 98.3 3.3E-07 1.1E-11 74.3 4.4 59 101-163 20-80 (232)
224 1inl_A Spermidine synthase; be 98.3 4.7E-07 1.6E-11 76.0 5.4 75 122-201 90-169 (296)
225 2pt6_A Spermidine synthase; tr 98.3 2.3E-07 8E-12 78.8 3.6 75 122-201 116-195 (321)
226 4e2x_A TCAB9; kijanose, tetron 98.3 1.1E-07 3.9E-12 82.9 1.5 75 121-207 106-183 (416)
227 3mq2_A 16S rRNA methyltransfer 98.3 4.9E-07 1.7E-11 71.6 5.0 63 122-185 27-92 (218)
228 1vlm_A SAM-dependent methyltra 98.3 8.2E-07 2.8E-11 70.5 5.9 67 122-207 47-114 (219)
229 1m6y_A S-adenosyl-methyltransf 98.3 5.5E-07 1.9E-11 75.9 4.9 74 121-201 25-104 (301)
230 1iy9_A Spermidine synthase; ro 98.3 8.3E-07 2.8E-11 73.7 5.7 78 122-205 75-157 (275)
231 2o07_A Spermidine synthase; st 98.3 5.8E-07 2E-11 75.8 4.8 75 122-201 95-174 (304)
232 3m6w_A RRNA methylase; rRNA me 98.3 5.5E-07 1.9E-11 80.2 4.8 84 102-201 89-176 (464)
233 3uzu_A Ribosomal RNA small sub 98.3 2.6E-06 9E-11 71.0 8.5 43 121-163 41-88 (279)
234 2oyr_A UPF0341 protein YHIQ; a 98.3 8.5E-07 2.9E-11 73.2 5.3 44 122-165 86-132 (258)
235 1sqg_A SUN protein, FMU protei 98.3 1.7E-06 5.6E-11 76.2 7.5 74 121-201 245-321 (429)
236 3bwc_A Spermidine synthase; SA 98.2 9E-07 3.1E-11 74.5 5.2 76 122-201 95-175 (304)
237 2f8l_A Hypothetical protein LM 98.2 1.9E-06 6.5E-11 73.5 7.0 73 122-204 130-210 (344)
238 1mjf_A Spermidine synthase; sp 98.2 6.2E-07 2.1E-11 74.6 3.6 42 122-163 75-118 (281)
239 2b2c_A Spermidine synthase; be 98.2 5.3E-07 1.8E-11 76.4 3.0 75 122-201 108-187 (314)
240 3lst_A CALO1 methyltransferase 98.2 1.2E-06 4.3E-11 74.6 5.2 74 122-207 184-259 (348)
241 3ftd_A Dimethyladenosine trans 98.2 3.2E-06 1.1E-10 69.2 7.2 42 121-162 30-73 (249)
242 1uir_A Polyamine aminopropyltr 98.2 1.2E-06 4.2E-11 74.0 4.5 76 122-202 77-158 (314)
243 4a6d_A Hydroxyindole O-methylt 98.1 5.3E-06 1.8E-10 71.0 8.0 76 122-207 179-256 (353)
244 2qe6_A Uncharacterized protein 98.1 3.2E-06 1.1E-10 70.1 6.3 78 123-207 78-169 (274)
245 1ej0_A FTSJ; methyltransferase 98.1 3.6E-06 1.2E-10 63.3 5.6 70 121-206 21-99 (180)
246 2i7c_A Spermidine synthase; tr 98.1 1.4E-06 4.6E-11 72.6 3.4 77 122-201 78-157 (283)
247 3v97_A Ribosomal RNA large sub 98.1 1.1E-05 3.9E-10 75.2 9.3 76 122-202 190-310 (703)
248 3gjy_A Spermidine synthase; AP 98.1 2.3E-06 7.8E-11 72.6 3.8 72 124-201 91-165 (317)
249 3hp7_A Hemolysin, putative; st 98.0 3.6E-06 1.2E-10 70.6 4.9 56 101-160 68-125 (291)
250 2k4m_A TR8_protein, UPF0146 pr 98.0 3.9E-06 1.3E-10 63.3 4.2 47 105-157 24-73 (153)
251 2cmg_A Spermidine synthase; tr 98.0 2.1E-06 7E-11 70.9 2.9 72 122-202 72-146 (262)
252 4gqb_A Protein arginine N-meth 98.0 2.5E-05 8.5E-10 71.9 9.7 73 121-201 356-434 (637)
253 2wa2_A Non-structural protein 98.0 1E-06 3.6E-11 73.3 0.3 47 101-153 66-113 (276)
254 1fp2_A Isoflavone O-methyltran 98.0 1E-05 3.6E-10 68.9 6.3 69 122-207 188-258 (352)
255 1yub_A Ermam, rRNA methyltrans 97.9 4.5E-07 1.6E-11 73.7 -2.4 44 121-164 28-72 (245)
256 2zig_A TTHA0409, putative modi 97.9 2.4E-05 8.3E-10 65.4 8.1 46 121-166 234-280 (297)
257 1qyr_A KSGA, high level kasuga 97.9 7.5E-06 2.6E-10 67.2 4.8 43 121-165 20-65 (252)
258 2zfu_A Nucleomethylin, cerebra 97.9 6.9E-06 2.4E-10 64.7 4.4 60 122-207 67-127 (215)
259 3cvo_A Methyltransferase-like 97.9 5.5E-05 1.9E-09 60.1 9.5 55 122-182 30-88 (202)
260 3dou_A Ribosomal RNA large sub 97.9 2.3E-05 7.7E-10 61.4 6.2 47 102-152 9-55 (191)
261 2okc_A Type I restriction enzy 97.9 4E-05 1.4E-09 67.6 8.4 75 122-203 171-261 (445)
262 3lkd_A Type I restriction-modi 97.8 8.8E-05 3E-09 67.2 10.0 48 122-169 221-274 (542)
263 2ih2_A Modification methylase 97.8 1.9E-05 6.6E-10 68.5 5.4 77 104-202 25-105 (421)
264 1zg3_A Isoflavanone 4'-O-methy 97.8 3.2E-05 1.1E-09 66.0 6.0 69 122-207 193-263 (358)
265 3reo_A (ISO)eugenol O-methyltr 97.7 3.1E-05 1E-09 66.6 5.6 69 122-207 203-273 (368)
266 1fp1_D Isoliquiritigenin 2'-O- 97.7 2.4E-05 8.2E-10 67.2 4.9 69 122-207 209-279 (372)
267 2plw_A Ribosomal RNA methyltra 97.7 4.2E-05 1.5E-09 59.3 5.9 48 102-153 6-58 (201)
268 1g60_A Adenine-specific methyl 97.7 0.0001 3.5E-09 60.3 7.8 48 121-168 211-259 (260)
269 3p9c_A Caffeic acid O-methyltr 97.7 4.2E-05 1.4E-09 65.7 5.6 69 122-207 201-271 (364)
270 2nyu_A Putative ribosomal RNA 97.6 0.00012 4E-09 56.5 6.6 33 121-153 21-65 (196)
271 3s1s_A Restriction endonucleas 97.5 0.00011 3.6E-09 69.3 5.7 47 122-168 321-375 (878)
272 3ua3_A Protein arginine N-meth 97.5 0.00014 4.7E-09 67.5 6.1 72 123-202 410-502 (745)
273 2oxt_A Nucleoside-2'-O-methylt 97.5 0.00011 3.7E-09 60.6 4.9 47 101-153 58-105 (265)
274 2ar0_A M.ecoki, type I restric 97.3 0.00027 9.2E-09 64.0 6.2 48 122-169 169-237 (541)
275 3khk_A Type I restriction-modi 97.3 0.00032 1.1E-08 63.6 6.5 46 124-169 246-309 (544)
276 2qfm_A Spermine synthase; sper 97.2 0.00051 1.7E-08 59.1 6.1 43 122-164 188-232 (364)
277 2p41_A Type II methyltransfera 97.2 0.0002 6.9E-09 60.2 3.4 45 102-152 67-111 (305)
278 3sso_A Methyltransferase; macr 97.1 0.00023 7.8E-09 62.2 3.1 66 122-204 216-297 (419)
279 3giw_A Protein of unknown func 97.0 0.0014 4.9E-08 54.3 7.2 57 124-185 80-142 (277)
280 4auk_A Ribosomal RNA large sub 97.0 0.00094 3.2E-08 57.6 6.2 33 120-152 209-241 (375)
281 4fzv_A Putative methyltransfer 96.8 0.0033 1.1E-07 54.0 7.8 91 101-201 135-229 (359)
282 2ld4_A Anamorsin; methyltransf 96.6 0.0007 2.4E-08 51.4 1.9 64 121-207 11-75 (176)
283 1wg8_A Predicted S-adenosylmet 96.4 0.0062 2.1E-07 50.6 6.5 42 121-163 21-63 (285)
284 2xyq_A Putative 2'-O-methyl tr 96.4 0.0034 1.2E-07 52.3 4.9 33 120-154 61-103 (290)
285 3o4f_A Spermidine synthase; am 96.0 0.034 1.2E-06 46.4 9.1 77 122-201 83-163 (294)
286 2py6_A Methyltransferase FKBM; 95.9 0.015 5.3E-07 50.5 7.0 45 121-165 225-274 (409)
287 2c7p_A Modification methylase 95.9 0.015 5E-07 49.2 6.6 44 121-164 9-54 (327)
288 3ufb_A Type I restriction-modi 95.9 0.023 8E-07 51.1 8.2 48 122-169 217-280 (530)
289 1i4w_A Mitochondrial replicati 95.7 0.018 6.2E-07 49.3 6.3 42 122-163 58-102 (353)
290 2oo3_A Protein involved in cat 95.4 0.00079 2.7E-08 56.0 -3.1 45 121-165 90-135 (283)
291 1g55_A DNA cytosine methyltran 95.4 0.019 6.5E-07 48.8 5.3 41 124-164 3-47 (343)
292 2efj_A 3,7-dimethylxanthine me 95.3 0.07 2.4E-06 46.1 8.7 81 123-207 53-161 (384)
293 1boo_A Protein (N-4 cytosine-s 95.1 0.035 1.2E-06 46.6 6.2 46 121-166 251-297 (323)
294 3g7u_A Cytosine-specific methy 95.0 0.034 1.2E-06 47.9 5.9 40 124-163 3-44 (376)
295 1eg2_A Modification methylase 95.0 0.045 1.5E-06 46.0 6.6 47 121-167 241-291 (319)
296 2wk1_A NOVP; transferase, O-me 94.5 0.051 1.7E-06 45.0 5.4 75 122-200 106-214 (282)
297 3evf_A RNA-directed RNA polyme 94.3 0.064 2.2E-06 44.3 5.5 53 95-152 52-106 (277)
298 3gcz_A Polyprotein; flavivirus 94.2 0.067 2.3E-06 44.2 5.5 54 96-154 69-125 (282)
299 3lkz_A Non-structural protein 94.1 0.05 1.7E-06 45.4 4.5 53 95-152 72-126 (321)
300 3b5i_A S-adenosyl-L-methionine 94.0 0.071 2.4E-06 45.9 5.5 85 123-207 53-162 (374)
301 2qy6_A UPF0209 protein YFCK; s 93.8 0.072 2.4E-06 43.4 4.9 32 122-153 60-106 (257)
302 3ubt_Y Modification methylase 93.5 0.093 3.2E-06 43.7 5.3 40 124-163 1-42 (331)
303 1m6e_X S-adenosyl-L-methionnin 92.5 0.033 1.1E-06 47.8 1.0 80 124-207 53-151 (359)
304 3p8z_A Mtase, non-structural p 92.3 0.22 7.4E-06 40.4 5.5 52 96-152 57-110 (267)
305 3qv2_A 5-cytosine DNA methyltr 92.3 0.25 8.5E-06 41.6 6.2 42 123-164 10-56 (327)
306 2qrv_A DNA (cytosine-5)-methyl 91.9 0.22 7.4E-06 41.4 5.3 42 122-163 15-60 (295)
307 4h0n_A DNMT2; SAH binding, tra 91.7 0.28 9.6E-06 41.4 5.9 40 125-164 5-48 (333)
308 3eld_A Methyltransferase; flav 91.7 0.23 7.7E-06 41.4 5.1 52 96-152 60-113 (300)
309 2dph_A Formaldehyde dismutase; 90.7 0.3 1E-05 41.8 5.2 41 120-160 183-227 (398)
310 3s2e_A Zinc-containing alcohol 90.6 0.44 1.5E-05 39.7 6.0 42 120-161 164-208 (340)
311 3me5_A Cytosine-specific methy 89.9 0.39 1.3E-05 42.7 5.3 41 123-163 88-130 (482)
312 1pl8_A Human sorbitol dehydrog 89.4 0.55 1.9E-05 39.4 5.7 42 120-161 169-214 (356)
313 1f8f_A Benzyl alcohol dehydrog 89.4 0.56 1.9E-05 39.6 5.7 42 120-161 188-233 (371)
314 1kol_A Formaldehyde dehydrogen 89.3 0.56 1.9E-05 40.0 5.7 42 120-161 183-228 (398)
315 3ado_A Lambda-crystallin; L-gu 89.1 0.59 2E-05 39.2 5.6 44 123-166 6-52 (319)
316 3uog_A Alcohol dehydrogenase; 88.2 0.76 2.6E-05 38.7 5.8 42 120-161 187-231 (363)
317 3tka_A Ribosomal RNA small sub 88.0 0.64 2.2E-05 39.5 5.0 40 121-160 56-99 (347)
318 1e3j_A NADP(H)-dependent ketos 88.0 0.8 2.7E-05 38.3 5.7 41 120-160 166-209 (352)
319 3two_A Mannitol dehydrogenase; 87.8 0.48 1.6E-05 39.6 4.3 42 120-161 174-218 (348)
320 1uuf_A YAHK, zinc-type alcohol 87.6 0.61 2.1E-05 39.5 4.8 42 120-161 192-236 (369)
321 3fpc_A NADP-dependent alcohol 87.2 0.67 2.3E-05 38.8 4.8 42 120-161 164-209 (352)
322 1p0f_A NADP-dependent alcohol 87.0 0.7 2.4E-05 39.0 4.8 42 120-161 189-234 (373)
323 4fn4_A Short chain dehydrogena 86.5 3.4 0.00012 33.3 8.5 60 120-185 4-67 (254)
324 1piw_A Hypothetical zinc-type 86.4 0.68 2.3E-05 38.9 4.4 42 120-161 177-221 (360)
325 3m6i_A L-arabinitol 4-dehydrog 86.1 0.87 3E-05 38.2 4.9 43 120-162 177-223 (363)
326 1e3i_A Alcohol dehydrogenase, 86.0 0.85 2.9E-05 38.5 4.8 41 120-160 193-237 (376)
327 3ip1_A Alcohol dehydrogenase, 85.7 1.1 3.9E-05 38.2 5.6 42 120-161 211-256 (404)
328 1cdo_A Alcohol dehydrogenase; 85.7 0.91 3.1E-05 38.3 4.8 41 120-160 190-234 (374)
329 1rjw_A ADH-HT, alcohol dehydro 85.4 1.4 4.9E-05 36.6 5.9 41 120-160 162-205 (339)
330 4ej6_A Putative zinc-binding d 85.2 1.3 4.4E-05 37.4 5.6 42 120-161 180-225 (370)
331 2px2_A Genome polyprotein [con 85.2 0.85 2.9E-05 37.3 4.1 43 96-143 52-94 (269)
332 2fzw_A Alcohol dehydrogenase c 85.1 1 3.4E-05 38.0 4.8 42 120-161 188-233 (373)
333 2h6e_A ADH-4, D-arabinose 1-de 84.7 1.3 4.4E-05 36.9 5.3 40 122-161 170-214 (344)
334 3uko_A Alcohol dehydrogenase c 84.6 0.7 2.4E-05 39.1 3.6 41 120-160 191-235 (378)
335 1vj0_A Alcohol dehydrogenase, 84.5 1.3 4.6E-05 37.4 5.4 41 120-160 193-237 (380)
336 2jhf_A Alcohol dehydrogenase E 84.4 1.1 3.9E-05 37.7 4.8 41 120-160 189-233 (374)
337 3jv7_A ADH-A; dehydrogenase, n 84.1 1.7 5.8E-05 36.1 5.8 42 120-161 169-214 (345)
338 4ft4_B DNA (cytosine-5)-methyl 83.6 1.1 3.9E-05 41.8 4.9 40 124-163 213-260 (784)
339 3c6k_A Spermine synthase; sper 83.5 2 6.7E-05 37.0 5.9 42 122-163 205-248 (381)
340 4dcm_A Ribosomal RNA large sub 83.2 6.2 0.00021 33.5 9.1 67 96-169 18-84 (375)
341 1h2b_A Alcohol dehydrogenase; 82.8 2 6.9E-05 36.0 5.7 41 120-160 184-228 (359)
342 3jyn_A Quinone oxidoreductase; 82.7 1.8 6E-05 35.7 5.3 42 120-161 138-183 (325)
343 2d8a_A PH0655, probable L-thre 82.6 1.3 4.4E-05 37.0 4.4 40 122-161 167-210 (348)
344 3qwb_A Probable quinone oxidor 82.2 1.9 6.4E-05 35.7 5.3 42 120-161 146-191 (334)
345 3swr_A DNA (cytosine-5)-methyl 82.0 2 6.8E-05 41.6 5.9 41 123-163 540-583 (1002)
346 4eez_A Alcohol dehydrogenase 1 81.9 2.3 7.9E-05 35.2 5.7 42 120-161 161-206 (348)
347 2c0c_A Zinc binding alcohol de 81.8 2 7E-05 36.0 5.4 42 120-161 161-206 (362)
348 3fbg_A Putative arginate lyase 81.2 2.1 7.3E-05 35.6 5.3 40 122-161 150-193 (346)
349 2cf5_A Atccad5, CAD, cinnamyl 81.1 1.7 5.9E-05 36.4 4.7 39 122-160 180-221 (357)
350 1pqw_A Polyketide synthase; ro 81.0 1.7 5.8E-05 32.9 4.2 41 120-160 36-80 (198)
351 3gms_A Putative NADPH:quinone 80.5 1.4 4.9E-05 36.5 3.9 42 120-161 142-187 (340)
352 2eih_A Alcohol dehydrogenase; 80.2 2.9 9.8E-05 34.7 5.7 42 120-161 164-209 (343)
353 4eye_A Probable oxidoreductase 80.1 1.9 6.4E-05 35.9 4.5 42 120-161 157-202 (342)
354 1v3u_A Leukotriene B4 12- hydr 79.9 2.6 8.9E-05 34.7 5.3 40 120-159 143-186 (333)
355 3iup_A Putative NADPH:quinone 79.8 2.1 7.3E-05 36.2 4.9 41 121-161 169-214 (379)
356 2cdc_A Glucose dehydrogenase g 79.6 2.1 7.2E-05 35.9 4.8 39 123-161 181-225 (366)
357 1iz0_A Quinone oxidoreductase; 79.3 1.5 5.1E-05 35.7 3.6 41 120-160 123-167 (302)
358 4dvj_A Putative zinc-dependent 79.1 1.9 6.4E-05 36.3 4.3 40 122-161 171-215 (363)
359 4hp8_A 2-deoxy-D-gluconate 3-d 79.1 14 0.00047 29.6 9.3 77 118-201 4-85 (247)
360 3goh_A Alcohol dehydrogenase, 79.1 1.6 5.5E-05 35.7 3.8 42 120-161 140-183 (315)
361 3o38_A Short chain dehydrogena 78.9 10 0.00035 29.8 8.5 61 120-185 19-84 (266)
362 2hcy_A Alcohol dehydrogenase 1 78.7 2.3 7.7E-05 35.4 4.6 42 120-161 167-212 (347)
363 4dkj_A Cytosine-specific methy 78.2 3 0.0001 36.1 5.3 43 123-165 10-60 (403)
364 3krt_A Crotonyl COA reductase; 78.2 2.6 9E-05 36.6 5.1 42 120-161 226-271 (456)
365 4b7c_A Probable oxidoreductase 77.5 2.4 8.1E-05 35.0 4.4 40 120-159 147-190 (336)
366 1rjd_A PPM1P, carboxy methyl t 77.3 4.8 0.00016 33.7 6.3 45 122-166 97-143 (334)
367 4dup_A Quinone oxidoreductase; 77.1 3.3 0.00011 34.5 5.2 42 120-161 165-210 (353)
368 1y1p_A ARII, aldehyde reductas 77.1 27 0.00091 28.0 10.8 41 120-161 8-53 (342)
369 4g81_D Putative hexonate dehyd 76.9 5.4 0.00018 32.1 6.2 48 120-167 6-57 (255)
370 1jvb_A NAD(H)-dependent alcoho 76.8 4.1 0.00014 33.8 5.7 42 120-161 168-214 (347)
371 3llv_A Exopolyphosphatase-rela 76.6 3.6 0.00012 29.1 4.7 37 122-160 5-46 (141)
372 2j3h_A NADP-dependent oxidored 76.5 3 0.0001 34.5 4.8 41 120-160 153-197 (345)
373 2dq4_A L-threonine 3-dehydroge 76.4 1.1 3.8E-05 37.2 2.1 40 122-161 164-207 (343)
374 3av4_A DNA (cytosine-5)-methyl 76.1 3.9 0.00013 40.7 6.0 42 122-163 850-894 (1330)
375 1f0y_A HCDH, L-3-hydroxyacyl-C 75.9 5.3 0.00018 32.5 6.0 39 124-162 16-57 (302)
376 3tqh_A Quinone oxidoreductase; 75.7 3.9 0.00013 33.5 5.2 42 120-161 150-194 (321)
377 3ioy_A Short-chain dehydrogena 75.5 16 0.00055 29.8 9.0 60 121-185 6-70 (319)
378 4a2c_A Galactitol-1-phosphate 75.4 4.7 0.00016 33.2 5.7 42 120-161 158-203 (346)
379 1yqd_A Sinapyl alcohol dehydro 75.4 3.1 0.00011 34.9 4.6 39 122-160 187-228 (366)
380 3ucx_A Short chain dehydrogena 75.3 19 0.00063 28.4 9.1 60 120-185 8-71 (264)
381 1yb5_A Quinone oxidoreductase; 75.0 4.3 0.00015 33.9 5.4 41 120-160 168-212 (351)
382 1zkd_A DUF185; NESG, RPR58, st 74.9 7 0.00024 33.6 6.7 34 124-157 82-125 (387)
383 4fs3_A Enoyl-[acyl-carrier-pro 74.5 9.3 0.00032 30.2 7.1 61 120-185 3-69 (256)
384 1yxm_A Pecra, peroxisomal tran 74.2 16 0.00054 29.2 8.5 64 120-185 15-83 (303)
385 3r24_A NSP16, 2'-O-methyl tran 74.1 6.9 0.00024 32.7 6.1 35 120-154 107-148 (344)
386 2j8z_A Quinone oxidoreductase; 74.0 4.5 0.00015 33.7 5.3 41 120-160 160-204 (354)
387 3gaz_A Alcohol dehydrogenase s 73.9 4.9 0.00017 33.3 5.4 41 120-161 148-192 (343)
388 4f3n_A Uncharacterized ACR, CO 73.9 7 0.00024 34.1 6.5 43 123-165 138-188 (432)
389 4a0s_A Octenoyl-COA reductase/ 73.7 4.1 0.00014 35.1 5.1 41 120-160 218-262 (447)
390 3fwz_A Inner membrane protein 72.6 3.9 0.00013 29.2 4.0 37 123-161 7-48 (140)
391 2b5w_A Glucose dehydrogenase; 72.6 2.9 0.0001 34.9 3.7 37 124-160 174-219 (357)
392 3nx4_A Putative oxidoreductase 71.9 3 0.0001 34.2 3.6 37 125-161 149-189 (324)
393 1qor_A Quinone oxidoreductase; 71.8 4.9 0.00017 32.9 4.9 42 120-161 138-183 (327)
394 1lss_A TRK system potassium up 71.6 8.6 0.00029 26.6 5.6 36 123-160 4-44 (140)
395 3h7a_A Short chain dehydrogena 71.4 13 0.00044 29.1 7.2 58 121-185 5-67 (252)
396 3qiv_A Short-chain dehydrogena 71.4 20 0.00067 27.8 8.2 58 121-185 7-69 (253)
397 3tjr_A Short chain dehydrogena 71.1 21 0.00072 28.7 8.6 58 121-185 29-91 (301)
398 3lyl_A 3-oxoacyl-(acyl-carrier 70.9 20 0.00068 27.6 8.2 58 121-185 3-65 (247)
399 3gaf_A 7-alpha-hydroxysteroid 70.8 19 0.00066 28.2 8.1 59 120-185 9-72 (256)
400 4fgs_A Probable dehydrogenase 70.5 10 0.00036 30.7 6.5 41 121-161 27-71 (273)
401 2dpo_A L-gulonate 3-dehydrogen 70.4 7.1 0.00024 32.4 5.6 42 123-164 6-50 (319)
402 4dio_A NAD(P) transhydrogenase 70.1 4.9 0.00017 34.8 4.6 41 121-161 188-231 (405)
403 1wly_A CAAR, 2-haloacrylate re 69.8 7 0.00024 32.1 5.4 42 120-161 143-188 (333)
404 1x13_A NAD(P) transhydrogenase 69.6 4.9 0.00017 34.5 4.6 39 121-159 170-211 (401)
405 3i1j_A Oxidoreductase, short c 69.3 22 0.00074 27.4 8.0 47 120-167 11-62 (247)
406 2vn8_A Reticulon-4-interacting 69.1 5.5 0.00019 33.4 4.7 40 120-159 181-223 (375)
407 3lf2_A Short chain oxidoreduct 69.1 32 0.0011 27.0 9.1 61 120-185 5-70 (265)
408 3tfo_A Putative 3-oxoacyl-(acy 68.9 20 0.00068 28.4 7.9 57 122-185 3-64 (264)
409 2vhw_A Alanine dehydrogenase; 68.1 8.2 0.00028 32.7 5.6 41 121-161 166-209 (377)
410 2vz8_A Fatty acid synthase; tr 67.9 1.1 3.9E-05 47.3 0.2 72 125-206 1243-1322(2512)
411 3rkr_A Short chain oxidoreduct 67.9 22 0.00074 27.9 7.9 57 121-184 27-88 (262)
412 4dry_A 3-oxoacyl-[acyl-carrier 67.6 19 0.00066 28.7 7.6 60 120-185 30-94 (281)
413 1pjc_A Protein (L-alanine dehy 67.4 8.8 0.0003 32.3 5.6 41 121-161 165-208 (361)
414 3c85_A Putative glutathione-re 67.4 8.1 0.00028 28.6 4.9 40 121-160 37-80 (183)
415 3t4x_A Oxidoreductase, short c 67.0 24 0.00084 27.7 8.0 45 121-166 8-57 (267)
416 4e12_A Diketoreductase; oxidor 66.9 11 0.00039 30.2 6.0 40 124-163 5-47 (283)
417 1tt7_A YHFP; alcohol dehydroge 66.8 2.8 9.5E-05 34.5 2.3 40 122-161 149-193 (330)
418 3ftp_A 3-oxoacyl-[acyl-carrier 66.6 24 0.00081 28.0 7.9 46 121-167 26-76 (270)
419 1xa0_A Putative NADPH dependen 66.2 2.5 8.4E-05 34.8 1.9 40 122-161 148-192 (328)
420 3p2y_A Alanine dehydrogenase/p 65.7 6.8 0.00023 33.6 4.6 40 121-160 182-224 (381)
421 2jah_A Clavulanic acid dehydro 65.6 37 0.0013 26.2 8.8 58 121-185 5-67 (247)
422 3f1l_A Uncharacterized oxidore 65.5 30 0.001 26.9 8.2 46 120-166 9-59 (252)
423 3vtf_A UDP-glucose 6-dehydroge 65.3 8.4 0.00029 33.7 5.2 37 124-160 22-61 (444)
424 1l7d_A Nicotinamide nucleotide 65.0 5.6 0.00019 33.8 4.0 39 121-159 170-211 (384)
425 3sju_A Keto reductase; short-c 64.9 27 0.00093 27.7 8.0 59 120-185 21-84 (279)
426 1fmc_A 7 alpha-hydroxysteroid 64.9 31 0.0011 26.4 8.1 44 121-165 9-57 (255)
427 2g1u_A Hypothetical protein TM 64.7 8.1 0.00028 27.9 4.3 37 120-156 16-55 (155)
428 3pk0_A Short-chain dehydrogena 64.4 27 0.00091 27.4 7.7 59 121-185 8-71 (262)
429 1iy8_A Levodione reductase; ox 64.1 41 0.0014 26.2 8.8 60 121-185 11-75 (267)
430 3svt_A Short-chain type dehydr 64.0 35 0.0012 26.9 8.4 61 121-185 9-74 (281)
431 3nyw_A Putative oxidoreductase 64.0 41 0.0014 26.1 8.7 61 121-185 5-70 (250)
432 2zb4_A Prostaglandin reductase 63.9 9.9 0.00034 31.5 5.3 42 120-161 156-204 (357)
433 3r1i_A Short-chain type dehydr 63.9 23 0.00079 28.1 7.3 59 120-185 29-92 (276)
434 1xg5_A ARPG836; short chain de 63.7 38 0.0013 26.6 8.6 59 121-184 30-93 (279)
435 2rhc_B Actinorhodin polyketide 63.7 38 0.0013 26.7 8.6 58 121-185 20-82 (277)
436 3tnl_A Shikimate dehydrogenase 63.5 6.3 0.00021 32.8 3.9 32 120-152 151-186 (315)
437 3o26_A Salutaridine reductase; 63.1 29 0.00099 27.4 7.9 60 121-186 10-74 (311)
438 3imf_A Short chain dehydrogena 63.1 19 0.00066 28.1 6.6 58 121-185 4-66 (257)
439 2eez_A Alanine dehydrogenase; 63.0 15 0.00052 30.8 6.3 38 121-160 164-206 (369)
440 3is3_A 17BETA-hydroxysteroid d 62.7 36 0.0012 26.7 8.3 59 120-185 15-79 (270)
441 1yb1_A 17-beta-hydroxysteroid 62.6 41 0.0014 26.4 8.6 59 120-185 28-91 (272)
442 1zem_A Xylitol dehydrogenase; 62.6 37 0.0013 26.5 8.3 58 121-185 5-67 (262)
443 3ic5_A Putative saccharopine d 62.4 14 0.00046 24.6 5.0 37 122-160 4-46 (118)
444 1ae1_A Tropinone reductase-I; 62.0 44 0.0015 26.3 8.7 58 121-185 19-81 (273)
445 4egf_A L-xylulose reductase; s 62.0 34 0.0012 26.8 8.0 60 121-186 18-82 (266)
446 1zcj_A Peroxisomal bifunctiona 61.8 13 0.00043 32.5 5.7 40 124-163 38-80 (463)
447 2ae2_A Protein (tropinone redu 61.8 41 0.0014 26.1 8.4 58 121-185 7-69 (260)
448 3v8b_A Putative dehydrogenase, 61.7 31 0.0011 27.5 7.8 58 121-185 26-88 (283)
449 3gqv_A Enoyl reductase; medium 61.4 9.7 0.00033 31.9 4.8 40 121-160 163-205 (371)
450 3awd_A GOX2181, putative polyo 60.8 48 0.0016 25.4 8.6 57 121-184 11-72 (260)
451 3h2z_A Mannitol-1-phosphate 5- 60.0 13 0.00044 31.8 5.3 39 124-162 1-43 (382)
452 4fc7_A Peroxisomal 2,4-dienoyl 59.9 46 0.0016 26.2 8.5 60 120-185 24-88 (277)
453 4imr_A 3-oxoacyl-(acyl-carrier 59.9 21 0.00072 28.4 6.4 58 121-185 31-93 (275)
454 4iin_A 3-ketoacyl-acyl carrier 59.7 39 0.0013 26.4 8.0 59 120-185 26-90 (271)
455 2zat_A Dehydrogenase/reductase 59.7 43 0.0015 25.9 8.2 44 121-165 12-60 (260)
456 2qq5_A DHRS1, dehydrogenase/re 59.6 39 0.0013 26.3 7.9 58 121-185 3-65 (260)
457 1vl8_A Gluconate 5-dehydrogena 59.3 55 0.0019 25.6 8.8 43 120-163 18-65 (267)
458 4da9_A Short-chain dehydrogena 58.9 51 0.0018 26.1 8.6 59 121-185 27-90 (280)
459 3ai3_A NADPH-sorbose reductase 58.5 56 0.0019 25.3 8.7 43 121-164 5-52 (263)
460 3cxt_A Dehydrogenase with diff 58.3 50 0.0017 26.4 8.5 58 121-185 32-94 (291)
461 4eso_A Putative oxidoreductase 58.2 25 0.00086 27.5 6.5 41 121-162 6-51 (255)
462 4ibo_A Gluconate dehydrogenase 58.0 23 0.00077 28.1 6.2 46 120-166 23-73 (271)
463 1xu9_A Corticosteroid 11-beta- 58.0 49 0.0017 26.1 8.3 58 121-184 26-88 (286)
464 3tox_A Short chain dehydrogena 57.4 18 0.00061 28.9 5.6 42 121-163 6-52 (280)
465 3ce6_A Adenosylhomocysteinase; 57.3 16 0.00054 32.4 5.6 40 120-159 271-313 (494)
466 3rih_A Short chain dehydrogena 57.1 21 0.00073 28.8 6.0 60 120-185 38-102 (293)
467 3edm_A Short chain dehydrogena 56.7 39 0.0013 26.3 7.4 57 121-184 6-68 (259)
468 3uf0_A Short-chain dehydrogena 56.6 35 0.0012 27.0 7.2 32 120-152 28-63 (273)
469 3jyo_A Quinate/shikimate dehyd 56.4 16 0.00055 29.7 5.1 45 120-164 124-172 (283)
470 3zwc_A Peroxisomal bifunctiona 56.3 16 0.00056 34.0 5.7 42 124-165 317-361 (742)
471 1xkq_A Short-chain reductase f 55.5 42 0.0014 26.4 7.5 61 121-185 4-69 (280)
472 4b79_A PA4098, probable short- 54.5 17 0.00057 29.0 4.8 36 119-154 7-46 (242)
473 3n74_A 3-ketoacyl-(acyl-carrie 54.3 32 0.0011 26.7 6.5 41 121-161 7-51 (261)
474 3k31_A Enoyl-(acyl-carrier-pro 53.6 35 0.0012 27.4 6.7 45 120-164 27-77 (296)
475 1jw9_B Molybdopterin biosynthe 53.5 5 0.00017 31.9 1.6 32 121-152 29-63 (249)
476 3ijr_A Oxidoreductase, short c 53.5 59 0.002 25.9 8.1 59 120-185 44-108 (291)
477 3l77_A Short-chain alcohol deh 53.4 70 0.0024 24.1 8.6 57 123-185 2-63 (235)
478 3lk7_A UDP-N-acetylmuramoylala 53.1 22 0.00077 30.6 5.8 32 121-152 7-40 (451)
479 3f9i_A 3-oxoacyl-[acyl-carrier 53.1 29 0.001 26.6 6.1 42 119-161 10-56 (249)
480 3rwb_A TPLDH, pyridoxal 4-dehy 53.0 32 0.0011 26.6 6.3 40 121-161 4-48 (247)
481 1xhl_A Short-chain dehydrogena 52.4 55 0.0019 26.1 7.8 61 121-185 24-89 (297)
482 3gvc_A Oxidoreductase, probabl 52.3 32 0.0011 27.3 6.3 42 121-162 27-72 (277)
483 3oig_A Enoyl-[acyl-carrier-pro 52.2 61 0.0021 25.1 7.9 60 121-185 5-70 (266)
484 3ppi_A 3-hydroxyacyl-COA dehyd 52.2 28 0.00096 27.4 5.9 41 121-162 28-73 (281)
485 3op4_A 3-oxoacyl-[acyl-carrier 51.5 31 0.0011 26.8 6.0 41 121-162 7-52 (248)
486 4f6c_A AUSA reductase domain p 51.4 48 0.0016 27.8 7.6 79 122-202 68-157 (427)
487 3e8x_A Putative NAD-dependent 51.4 26 0.00088 26.7 5.4 37 120-157 18-59 (236)
488 1xq1_A Putative tropinone redu 50.8 67 0.0023 24.8 7.9 44 121-165 12-60 (266)
489 1w6u_A 2,4-dienoyl-COA reducta 50.8 85 0.0029 24.7 8.7 59 121-185 24-87 (302)
490 3pgx_A Carveol dehydrogenase; 50.6 75 0.0026 24.9 8.3 32 120-152 12-47 (280)
491 3v2g_A 3-oxoacyl-[acyl-carrier 50.4 87 0.003 24.6 8.6 58 120-184 28-91 (271)
492 3pxx_A Carveol dehydrogenase; 50.2 86 0.0029 24.4 8.6 32 120-152 7-42 (287)
493 1e7w_A Pteridine reductase; di 49.8 65 0.0022 25.5 7.8 59 121-186 7-72 (291)
494 4dmm_A 3-oxoacyl-[acyl-carrier 49.8 70 0.0024 25.1 7.9 58 121-185 26-89 (269)
495 3t7c_A Carveol dehydrogenase; 49.8 86 0.0029 24.9 8.6 32 121-152 26-60 (299)
496 2hmt_A YUAA protein; RCK, KTN, 49.5 10 0.00034 26.3 2.5 33 122-156 5-42 (144)
497 3s55_A Putative short-chain de 49.4 89 0.0031 24.4 8.6 32 120-152 7-42 (281)
498 3mog_A Probable 3-hydroxybutyr 49.4 23 0.00078 31.2 5.3 42 124-165 6-50 (483)
499 3sx2_A Putative 3-ketoacyl-(ac 49.3 92 0.0031 24.3 8.7 32 120-152 10-45 (278)
500 3uve_A Carveol dehydrogenase ( 49.1 81 0.0028 24.7 8.3 32 121-152 9-43 (286)
No 1
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.64 E-value=5e-16 Score=129.95 Aligned_cols=113 Identities=33% Similarity=0.437 Sum_probs=81.5
Q ss_pred CCcccEEEeccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh--HHHHHHHHHHHHHhcc
Q 028335 92 PGVTGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGA-QVILTDL--PDRLRLLKKNIENNLR 168 (210)
Q Consensus 92 ~g~tG~~~W~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~--~~~l~~~~~N~~~n~~ 168 (210)
...+|..+|+++..|++|+..... ..++++|||||||+|.+++.+++.++ +|+++|+ +.+++.+++|+..|..
T Consensus 53 ~~~~g~~~~~~~~~l~~~l~~~~~----~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~ 128 (281)
T 3bzb_A 53 HPLWTSHVWSGARALADTLCWQPE----LIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTA 128 (281)
T ss_dssp ---------CHHHHHHHHHHHCGG----GTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC
T ss_pred CCCCCceeecHHHHHHHHHHhcch----hcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhh
Confidence 455789999999999999987532 35788999999999999999999887 8999999 5899999999965532
Q ss_pred CC-CC----CCceEEEEeeCCCCCCCCc---cCCCCcEEEEcceeeec
Q 028335 169 HG-DL----RGSAVVTELTWGDDPDQDL---IQPLPDYGNESLLLFLQ 208 (210)
Q Consensus 169 ~~-~~----~~~~~~~~l~w~~~~~~~~---~~~~fD~Iia~DviY~~ 208 (210)
.. .. ..++.+..++|++...... ...+||+|+++|++|+.
T Consensus 129 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~ 176 (281)
T 3bzb_A 129 NSCSSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFH 176 (281)
T ss_dssp ----------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCG
T ss_pred hhcccccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccCh
Confidence 10 00 1357888899988543221 25689999999999975
No 2
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.27 E-value=1.1e-10 Score=101.62 Aligned_cols=123 Identities=16% Similarity=0.139 Sum_probs=91.1
Q ss_pred cceeEEeecCceEEEEeCCCCCCCCCcccEEEeccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEE
Q 028335 68 SLNLRIDACGHSLSILQSPSSLGTPGVTGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQV 147 (210)
Q Consensus 68 ~~~~~~~~~g~~~~i~q~~~~~~~~g~tG~~~W~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~V 147 (210)
...+...+.+..+.+...++.++..+. .+.+..+.+++..... ....++.+|||+|||+|.+++.+++.+++|
T Consensus 186 w~~~~~~~~g~~~~~~~~pgvFs~~~~-----d~~t~~ll~~l~~~l~--~~~~~~~~VLDlGcG~G~~~~~la~~g~~V 258 (381)
T 3dmg_A 186 WRAFSARILGAEYTFHHLPGVFSAGKV-----DPASLLLLEALQERLG--PEGVRGRQVLDLGAGYGALTLPLARMGAEV 258 (381)
T ss_dssp CEEEEEEETTEEEEEEECTTCTTTTSC-----CHHHHHHHHHHHHHHC--TTTTTTCEEEEETCTTSTTHHHHHHTTCEE
T ss_pred cceeeEEecCceEEEEeCCCceeCCCC-----CHHHHHHHHHHHHhhc--ccCCCCCEEEEEeeeCCHHHHHHHHcCCEE
Confidence 355667778888999999988775543 3556666666654321 012477899999999999999999999999
Q ss_pred EEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEEEcceee
Q 028335 148 ILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGNESLLLF 206 (210)
Q Consensus 148 v~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Iia~DviY 206 (210)
+++|+ +.+++.+++|+..|+.. +.+...++.+. .....+||+|++...++
T Consensus 259 ~gvDis~~al~~A~~n~~~~~~~------v~~~~~D~~~~---~~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 259 VGVEDDLASVLSLQKGLEANALK------AQALHSDVDEA---LTEEARFDIIVTNPPFH 309 (381)
T ss_dssp EEEESBHHHHHHHHHHHHHTTCC------CEEEECSTTTT---SCTTCCEEEEEECCCCC
T ss_pred EEEECCHHHHHHHHHHHHHcCCC------eEEEEcchhhc---cccCCCeEEEEECCchh
Confidence 99999 99999999999998754 45555554332 22246899999876544
No 3
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.23 E-value=2.6e-11 Score=99.66 Aligned_cols=109 Identities=20% Similarity=0.227 Sum_probs=80.7
Q ss_pred ecCceEEEEeCCCCCCCCCcccEEEeccHHHHHHHHhhhhhcCcccc-CCCEEEEECCccCHHHHHHHHcCC-EEEEEeh
Q 028335 75 ACGHSLSILQSPSSLGTPGVTGSVMWDSGVVLGKFLEHAVDSGMLLL-HGKKIVELGSGCGLVGCIAALLGA-QVILTDL 152 (210)
Q Consensus 75 ~~g~~~~i~q~~~~~~~~g~tG~~~W~aa~~la~~L~~~~~~~~~~~-~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~ 152 (210)
+.+..+.|.|.+..+. ..-.+.+++.|+. .. ++.+|||+|||+|.+++.+++.+. +|+++|+
T Consensus 17 ~~~~~~~i~q~~~~~~--------~~~d~~ll~~~~~--------~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi 80 (259)
T 3lpm_A 17 LLAENLRIIQSPSVFS--------FSIDAVLLAKFSY--------LPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEI 80 (259)
T ss_dssp ETTTTEEEEEBTTTBC--------CCHHHHHHHHHCC--------CCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECC
T ss_pred ccCCCEEEEeCCCCcc--------CcHHHHHHHHHhc--------CCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEEC
Confidence 3456788998875433 2234677777753 23 678999999999999999998866 8999999
Q ss_pred -HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEEEcce
Q 028335 153 -PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGNESLL 204 (210)
Q Consensus 153 -~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Iia~Dv 204 (210)
+.+++.+++|+..|+.. .++.+...++.+... .+...+||+|++.-.
T Consensus 81 ~~~~~~~a~~n~~~~~~~----~~v~~~~~D~~~~~~-~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 81 QERLADMAKRSVAYNQLE----DQIEIIEYDLKKITD-LIPKERADIVTCNPP 128 (259)
T ss_dssp SHHHHHHHHHHHHHTTCT----TTEEEECSCGGGGGG-TSCTTCEEEEEECCC
T ss_pred CHHHHHHHHHHHHHCCCc----ccEEEEECcHHHhhh-hhccCCccEEEECCC
Confidence 99999999999999875 457776666543321 123568999998544
No 4
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.21 E-value=2.4e-11 Score=105.67 Aligned_cols=76 Identities=17% Similarity=0.183 Sum_probs=62.2
Q ss_pred ccccCCCEEEEECCccCHHHHHHHHcCC-EEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 118 MLLLHGKKIVELGSGCGLVGCIAALLGA-QVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 118 ~~~~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
...+++++|||||||+|++++.+|+.|+ +|+++|...+++.++++++.|++. +++.+..-+..+. . ...+|
T Consensus 79 ~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~----~~i~~i~~~~~~~---~-lpe~~ 150 (376)
T 4hc4_A 79 WAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLE----DRVHVLPGPVETV---E-LPEQV 150 (376)
T ss_dssp HHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCT----TTEEEEESCTTTC---C-CSSCE
T ss_pred HHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCC----ceEEEEeeeeeee---c-CCccc
Confidence 3467999999999999999999999998 699999955889999999999876 5677776664432 1 23589
Q ss_pred cEEEE
Q 028335 197 DYGNE 201 (210)
Q Consensus 197 D~Iia 201 (210)
|+||+
T Consensus 151 Dvivs 155 (376)
T 4hc4_A 151 DAIVS 155 (376)
T ss_dssp EEEEC
T ss_pred cEEEe
Confidence 99997
No 5
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.19 E-value=2.4e-11 Score=99.94 Aligned_cols=87 Identities=23% Similarity=0.225 Sum_probs=65.3
Q ss_pred eccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEE
Q 028335 100 WDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVV 178 (210)
Q Consensus 100 W~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~ 178 (210)
.+++....+++... ..++.+|||+|||+|.+++.++++|++|+++|+ +.+++.+++|+..|+.. +.+
T Consensus 104 ~~tt~~~~~~l~~~------~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~------v~~ 171 (254)
T 2nxc_A 104 HETTRLALKALARH------LRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVR------PRF 171 (254)
T ss_dssp SHHHHHHHHHHHHH------CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCC------CEE
T ss_pred CHHHHHHHHHHHHh------cCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCc------EEE
Confidence 34555555666543 246789999999999999999999999999999 99999999999988753 344
Q ss_pred EEeeCCCCCCCCccCCCCcEEEEc
Q 028335 179 TELTWGDDPDQDLIQPLPDYGNES 202 (210)
Q Consensus 179 ~~l~w~~~~~~~~~~~~fD~Iia~ 202 (210)
...++.+. +...+||+|++.
T Consensus 172 ~~~d~~~~----~~~~~fD~Vv~n 191 (254)
T 2nxc_A 172 LEGSLEAA----LPFGPFDLLVAN 191 (254)
T ss_dssp EESCHHHH----GGGCCEEEEEEE
T ss_pred EECChhhc----CcCCCCCEEEEC
Confidence 44333221 234689999975
No 6
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.16 E-value=2.4e-10 Score=99.36 Aligned_cols=116 Identities=16% Similarity=0.080 Sum_probs=81.0
Q ss_pred EEeecCceEEEEeCCCCCCCCCcccEEEeccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc--CCEEEE
Q 028335 72 RIDACGHSLSILQSPSSLGTPGVTGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL--GAQVIL 149 (210)
Q Consensus 72 ~~~~~g~~~~i~q~~~~~~~~g~tG~~~W~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~--g~~Vv~ 149 (210)
.....+..+++.+.++.++..+. ...+..+..++. ..++.+|||||||+|.+++.+++. +.+|++
T Consensus 185 ~~~~~~~~~~~~~~pg~Fs~~~~-----d~~~~~ll~~l~--------~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~g 251 (375)
T 4dcm_A 185 SWKLEGTDWTIHNHANVFSRTGL-----DIGARFFMQHLP--------ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVF 251 (375)
T ss_dssp EEEETTTTEEEEECTTCTTCSSC-----CHHHHHHHHTCC--------CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEE
T ss_pred EEEecCCceEEEeCCCcccCCcc-----cHHHHHHHHhCc--------ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEE
Confidence 34556778899999988765443 233333333332 125589999999999999999988 579999
Q ss_pred Eeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEEEcceee
Q 028335 150 TDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGNESLLLF 206 (210)
Q Consensus 150 tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Iia~DviY 206 (210)
+|+ +.+++.+++|+..|+... ..++.+...+..+ .+...+||+|++...++
T Consensus 252 vD~s~~al~~Ar~n~~~ngl~~--~~~v~~~~~D~~~----~~~~~~fD~Ii~nppfh 303 (375)
T 4dcm_A 252 VDESPMAVASSRLNVETNMPEA--LDRCEFMINNALS----GVEPFRFNAVLCNPPFH 303 (375)
T ss_dssp EESCHHHHHHHHHHHHHHCGGG--GGGEEEEECSTTT----TCCTTCEEEEEECCCC-
T ss_pred EECcHHHHHHHHHHHHHcCCCc--CceEEEEechhhc----cCCCCCeeEEEECCCcc
Confidence 999 999999999999998641 1134445544333 23456899999976654
No 7
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.14 E-value=3e-10 Score=92.32 Aligned_cols=80 Identities=18% Similarity=0.062 Sum_probs=65.7
Q ss_pred ccCCCEEEEECCccCHHHHHHHHc-CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~-g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
..++.+|||+|||+|.++..+++. +.+|+++|+ +.+++.+++++..+++. .++.+...++.+.. . +.+||
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~----~~v~~~~~d~~~~~---~-~~~fD 105 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVS----ERVHFIHNDAAGYV---A-NEKCD 105 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCCTTCC---C-SSCEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCC----cceEEEECChHhCC---c-CCCCC
Confidence 347789999999999999999875 779999999 99999999999888764 45777777765432 2 56899
Q ss_pred EEEEcceeee
Q 028335 198 YGNESLLLFL 207 (210)
Q Consensus 198 ~Iia~DviY~ 207 (210)
+|++..+++.
T Consensus 106 ~V~~~~~~~~ 115 (256)
T 1nkv_A 106 VAACVGATWI 115 (256)
T ss_dssp EEEEESCGGG
T ss_pred EEEECCChHh
Confidence 9999998865
No 8
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.14 E-value=3e-10 Score=91.93 Aligned_cols=92 Identities=11% Similarity=-0.016 Sum_probs=72.3
Q ss_pred eccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEE
Q 028335 100 WDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVV 178 (210)
Q Consensus 100 W~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~ 178 (210)
|+....+.+.+. ..++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.+++++..++.. ++.+
T Consensus 7 ~~~~~~~~~~~~--------~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~ 73 (239)
T 1xxl_A 7 HHSLGLMIKTAE--------CRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVE-----NVRF 73 (239)
T ss_dssp HHHHHHHHHHHT--------CCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCC-----SEEE
T ss_pred CCCcchHHHHhC--------cCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCC-----CeEE
Confidence 566655555554 347889999999999999999998889999999 99999999999888753 4666
Q ss_pred EEeeCCCCCCCCccCCCCcEEEEcceeee
Q 028335 179 TELTWGDDPDQDLIQPLPDYGNESLLLFL 207 (210)
Q Consensus 179 ~~l~w~~~~~~~~~~~~fD~Iia~DviY~ 207 (210)
...++... .+.+.+||+|++..++++
T Consensus 74 ~~~d~~~~---~~~~~~fD~v~~~~~l~~ 99 (239)
T 1xxl_A 74 QQGTAESL---PFPDDSFDIITCRYAAHH 99 (239)
T ss_dssp EECBTTBC---CSCTTCEEEEEEESCGGG
T ss_pred EecccccC---CCCCCcEEEEEECCchhh
Confidence 66665432 234568999999988764
No 9
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.13 E-value=2.7e-10 Score=88.34 Aligned_cols=75 Identities=11% Similarity=-0.038 Sum_probs=58.2
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|..++.+++.+.+|+++|+ +.+++.+++|+..++.. ++.+..-+..... .+.+.+||+|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~-----~v~~~~~~~~~l~--~~~~~~fD~v 93 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIE-----NTELILDGHENLD--HYVREPIRAA 93 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCC-----CEEEEESCGGGGG--GTCCSCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCC-----cEEEEeCcHHHHH--hhccCCcCEE
Confidence 46889999999999999999988889999999 99999999999988753 4555553322111 1235689999
Q ss_pred EEc
Q 028335 200 NES 202 (210)
Q Consensus 200 ia~ 202 (210)
++.
T Consensus 94 ~~~ 96 (185)
T 3mti_A 94 IFN 96 (185)
T ss_dssp EEE
T ss_pred EEe
Confidence 765
No 10
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.10 E-value=2.6e-10 Score=92.50 Aligned_cols=75 Identities=12% Similarity=0.016 Sum_probs=59.7
Q ss_pred CCCEEEEECCccCHHHHHHHHcCC--EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGA--QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~--~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
++.+|||+|||+|.+++.+++.+. +|+++|+ +.+++.+++|++.|++. +++.+...++...... ..+||+
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~----~~i~~~~~d~l~~l~~---~~~~D~ 87 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK----EKIQVRLANGLAAFEE---TDQVSV 87 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT----TTEEEEECSGGGGCCG---GGCCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEEECchhhhccc---CcCCCE
Confidence 677999999999999999999874 7999999 99999999999999876 4677777665332221 126998
Q ss_pred EEEcc
Q 028335 199 GNESL 203 (210)
Q Consensus 199 Iia~D 203 (210)
|+.+.
T Consensus 88 IviaG 92 (225)
T 3kr9_A 88 ITIAG 92 (225)
T ss_dssp EEEEE
T ss_pred EEEcC
Confidence 87543
No 11
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.10 E-value=5.2e-10 Score=90.93 Aligned_cols=80 Identities=16% Similarity=0.086 Sum_probs=66.4
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.++.+|||+|||+|..++.+++.+. +|+++|+ +.+++.+++|+..++.. +++.+...++.+. .+...+||+
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~---~~~~~~fD~ 117 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCA----DRVKGITGSMDNL---PFQNEELDL 117 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTTSC---SSCTTCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCC----CceEEEECChhhC---CCCCCCEEE
Confidence 4677999999999999999998755 9999999 99999999999988765 4577777776432 234578999
Q ss_pred EEEcceeee
Q 028335 199 GNESLLLFL 207 (210)
Q Consensus 199 Iia~DviY~ 207 (210)
|++..++++
T Consensus 118 v~~~~~l~~ 126 (257)
T 3f4k_A 118 IWSEGAIYN 126 (257)
T ss_dssp EEEESCSCC
T ss_pred EEecChHhh
Confidence 999998875
No 12
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.09 E-value=2.7e-10 Score=93.42 Aligned_cols=75 Identities=12% Similarity=0.053 Sum_probs=59.5
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC--EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA--QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~--~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
.++.+|||+|||+|.+++.+++.+. +|+++|+ +.+++.+++|++.|++. +++.+...+..+... ...+||
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~----~~I~v~~gD~l~~~~---~~~~~D 92 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLT----EQIDVRKGNGLAVIE---KKDAID 92 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT----TTEEEEECSGGGGCC---GGGCCC
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEEecchhhccC---cccccc
Confidence 3677999999999999999999874 6999999 99999999999999875 457776666433221 123699
Q ss_pred EEEEc
Q 028335 198 YGNES 202 (210)
Q Consensus 198 ~Iia~ 202 (210)
+|+.+
T Consensus 93 ~Ivia 97 (244)
T 3gnl_A 93 TIVIA 97 (244)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88754
No 13
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.09 E-value=5.1e-10 Score=91.87 Aligned_cols=80 Identities=15% Similarity=0.071 Sum_probs=66.6
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.++.+|||+|||+|..++.+++.+. +|+++|+ +.+++.+++++..+++. .++.+...++.+.. +...+||+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~---~~~~~fD~ 117 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQ----NRVTGIVGSMDDLP---FRNEELDL 117 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTTSCC---CCTTCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCC----cCcEEEEcChhhCC---CCCCCEEE
Confidence 4678999999999999999998754 9999999 99999999999988765 46788887774432 34578999
Q ss_pred EEEcceeee
Q 028335 199 GNESLLLFL 207 (210)
Q Consensus 199 Iia~DviY~ 207 (210)
|++..+++.
T Consensus 118 i~~~~~~~~ 126 (267)
T 3kkz_A 118 IWSEGAIYN 126 (267)
T ss_dssp EEESSCGGG
T ss_pred EEEcCCcee
Confidence 999998764
No 14
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.09 E-value=7.4e-10 Score=88.11 Aligned_cols=99 Identities=13% Similarity=-0.012 Sum_probs=70.0
Q ss_pred cHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcC--CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEE
Q 028335 102 SGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVV 178 (210)
Q Consensus 102 aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g--~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~ 178 (210)
-.....+++..... ..++.+|||+|||+|.++..+++.+ .+|+++|+ +.+++.+++++..+++......++.+
T Consensus 13 ~~~~~~~~l~~~l~----~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~ 88 (219)
T 3jwg_A 13 LNQQRLGTVVAVLK----SVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISL 88 (219)
T ss_dssp HHHHHHHHHHHHHH----HTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEE
T ss_pred chHHHHHHHHHHHh----hcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEE
Confidence 34444455544332 2367899999999999999999876 58999999 99999999998877643100114666
Q ss_pred EEeeCCCCCCCCccCCCCcEEEEcceeee
Q 028335 179 TELTWGDDPDQDLIQPLPDYGNESLLLFL 207 (210)
Q Consensus 179 ~~l~w~~~~~~~~~~~~fD~Iia~DviY~ 207 (210)
...+... ......+||+|++.++++.
T Consensus 89 ~~~d~~~---~~~~~~~fD~V~~~~~l~~ 114 (219)
T 3jwg_A 89 FQSSLVY---RDKRFSGYDAATVIEVIEH 114 (219)
T ss_dssp EECCSSS---CCGGGTTCSEEEEESCGGG
T ss_pred EeCcccc---cccccCCCCEEEEHHHHHh
Confidence 6666522 2223468999999998764
No 15
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.08 E-value=2.3e-09 Score=82.83 Aligned_cols=116 Identities=16% Similarity=0.092 Sum_probs=79.3
Q ss_pred eEEeecCceEEEEeCCCCCCCCCcccEEEeccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEEEEE
Q 028335 71 LRIDACGHSLSILQSPSSLGTPGVTGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILT 150 (210)
Q Consensus 71 ~~~~~~g~~~~i~q~~~~~~~~g~tG~~~W~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~Vv~t 150 (210)
+.....+..+.+...++.+..... ...+..+..++. ..++.+|||+|||+|.+++.+++.+.+|+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~--------~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~ 80 (194)
T 1dus_A 14 VEDILRGKKLKFKTDSGVFSYGKV-----DKGTKILVENVV--------VDKDDDILDLGCGYGVIGIALADEVKSTTMA 80 (194)
T ss_dssp EEEEETTEEEEEEEETTSTTTTSC-----CHHHHHHHHHCC--------CCTTCEEEEETCTTSHHHHHHGGGSSEEEEE
T ss_pred EeeecCCCceEEEeCCCcCCcccc-----chHHHHHHHHcc--------cCCCCeEEEeCCCCCHHHHHHHHcCCeEEEE
Confidence 444566777877766655432221 112233333321 2367899999999999999999888899999
Q ss_pred eh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEEEcceee
Q 028335 151 DL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGNESLLLF 206 (210)
Q Consensus 151 D~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Iia~DviY 206 (210)
|+ +.+++.+++|+..++... .++.+...++.+.. ...+||+|++..+++
T Consensus 81 D~~~~~~~~a~~~~~~~~~~~---~~~~~~~~d~~~~~----~~~~~D~v~~~~~~~ 130 (194)
T 1dus_A 81 DINRRAIKLAKENIKLNNLDN---YDIRVVHSDLYENV----KDRKYNKIITNPPIR 130 (194)
T ss_dssp ESCHHHHHHHHHHHHHTTCTT---SCEEEEECSTTTTC----TTSCEEEEEECCCST
T ss_pred ECCHHHHHHHHHHHHHcCCCc---cceEEEECchhccc----ccCCceEEEECCCcc
Confidence 99 999999999998887540 13677777765432 245899999866543
No 16
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.08 E-value=5.5e-10 Score=94.05 Aligned_cols=81 Identities=11% Similarity=-0.023 Sum_probs=67.1
Q ss_pred ccCCCEEEEECCccCHHHHHHHHc-CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~-g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
+.++.+|||+|||+|.+++.+++. +.+|+++|+ +.+++.+++|+..+++. .++.+...+..+. .+.+.+||
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~---~~~~~~fD 187 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRID----DHVRSRVCNMLDT---PFDKGAVT 187 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTTSC---CCCTTCEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC----CceEEEECChhcC---CCCCCCEe
Confidence 346789999999999999999987 889999999 99999999999988765 4677777776432 23457899
Q ss_pred EEEEcceeee
Q 028335 198 YGNESLLLFL 207 (210)
Q Consensus 198 ~Iia~DviY~ 207 (210)
+|++.++++.
T Consensus 188 ~V~~~~~l~~ 197 (312)
T 3vc1_A 188 ASWNNESTMY 197 (312)
T ss_dssp EEEEESCGGG
T ss_pred EEEECCchhh
Confidence 9999998764
No 17
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.08 E-value=3.6e-10 Score=91.99 Aligned_cols=76 Identities=12% Similarity=0.007 Sum_probs=60.4
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC--EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA--QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~--~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
.++.+|+|+|||+|.+++.+++.+. +|+++|+ +.+++.+++|++.|++. +++.+...++.+... ...+||
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~----~~I~~~~gD~l~~~~---~~~~~D 92 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLT----SKIDVRLANGLSAFE---EADNID 92 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCT----TTEEEEECSGGGGCC---GGGCCC
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEECchhhccc---cccccC
Confidence 3677999999999999999999874 6999999 99999999999999875 467777766433321 223799
Q ss_pred EEEEcc
Q 028335 198 YGNESL 203 (210)
Q Consensus 198 ~Iia~D 203 (210)
+|+.+.
T Consensus 93 ~IviaG 98 (230)
T 3lec_A 93 TITICG 98 (230)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 887543
No 18
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.08 E-value=9.5e-11 Score=92.71 Aligned_cols=76 Identities=14% Similarity=0.020 Sum_probs=59.8
Q ss_pred cCCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
.+..+|||||||+|.+++.++.. +++|+++|+ +.|++.+++|+..++.. .++.+ .+ ... .....+||
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~----~~v~~--~d---~~~-~~~~~~~D 117 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTT----IKYRF--LN---KES-DVYKGTYD 117 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCS----SEEEE--EC---CHH-HHTTSEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCC----ccEEE--ec---ccc-cCCCCCcC
Confidence 35779999999999999999877 669999999 99999999999999875 24444 22 111 12346799
Q ss_pred EEEEcceee
Q 028335 198 YGNESLLLF 206 (210)
Q Consensus 198 ~Iia~DviY 206 (210)
+|++..++.
T Consensus 118 vVLa~k~LH 126 (200)
T 3fzg_A 118 VVFLLKMLP 126 (200)
T ss_dssp EEEEETCHH
T ss_pred hhhHhhHHH
Confidence 999998864
No 19
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.08 E-value=7.8e-11 Score=107.55 Aligned_cols=80 Identities=15% Similarity=0.115 Sum_probs=62.7
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||+|||.|+++..+|++|++|+|+|. +.+|+.|+..+..++.. ++.+...+.++... .....+||+|+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~-----~~~~~~~~~~~~~~-~~~~~~fD~v~ 139 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDF-----AAEFRVGRIEEVIA-ALEEGEFDLAI 139 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTS-----EEEEEECCHHHHHH-HCCTTSCSEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCC-----ceEEEECCHHHHhh-hccCCCccEEE
Confidence 5679999999999999999999999999999 99999999998877632 35555554332211 11245799999
Q ss_pred Ecceeee
Q 028335 201 ESLLLFL 207 (210)
Q Consensus 201 a~DviY~ 207 (210)
|.+|+++
T Consensus 140 ~~e~~eh 146 (569)
T 4azs_A 140 GLSVFHH 146 (569)
T ss_dssp EESCHHH
T ss_pred ECcchhc
Confidence 9999864
No 20
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.07 E-value=8.3e-10 Score=91.31 Aligned_cols=78 Identities=15% Similarity=0.110 Sum_probs=61.5
Q ss_pred cCCCEEEEECCccCHHHHHHHHc----CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL----GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPL 195 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~----g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~ 195 (210)
.++.+|||||||+|..++.+++. +++|+++|+ +.|++.+++++...+.. .++.+...+..+. .-++
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~----~~v~~~~~D~~~~-----~~~~ 139 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAP----TPVDVIEGDIRDI-----AIEN 139 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCS----SCEEEEESCTTTC-----CCCS
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccC----ceEEEeecccccc-----cccc
Confidence 47889999999999999999875 568999999 99999999998876654 4566666554332 2357
Q ss_pred CcEEEEcceeee
Q 028335 196 PDYGNESLLLFL 207 (210)
Q Consensus 196 fD~Iia~DviY~ 207 (210)
||+|++.-+++.
T Consensus 140 ~d~v~~~~~l~~ 151 (261)
T 4gek_A 140 ASMVVLNFTLQF 151 (261)
T ss_dssp EEEEEEESCGGG
T ss_pred cccceeeeeeee
Confidence 999999887653
No 21
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.06 E-value=3.7e-10 Score=91.29 Aligned_cols=78 Identities=19% Similarity=-0.006 Sum_probs=63.1
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|..++.+++.+.+|+++|+ +.+++.+++|+..+++. .++.+...++.+.. ...+||+|
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~----~~~~~D~v 148 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIA----DKIEFICGDFLLLA----SFLKADVV 148 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHG----GGCCCSEE
T ss_pred cCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCC----cCeEEEECChHHhc----ccCCCCEE
Confidence 37889999999999999999999999999999 99999999999988763 35666666643321 34589999
Q ss_pred EEcceee
Q 028335 200 NESLLLF 206 (210)
Q Consensus 200 ia~DviY 206 (210)
++...+.
T Consensus 149 ~~~~~~~ 155 (241)
T 3gdh_A 149 FLSPPWG 155 (241)
T ss_dssp EECCCCS
T ss_pred EECCCcC
Confidence 9765543
No 22
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.06 E-value=8e-10 Score=86.11 Aligned_cols=78 Identities=14% Similarity=0.092 Sum_probs=63.7
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.+++++..++.. ++.+...+..+. .+ ..+||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~~~d~~~~---~~-~~~~D~v 101 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLD-----NLHTRVVDLNNL---TF-DRQYDFI 101 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCT-----TEEEEECCGGGC---CC-CCCEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCC-----CcEEEEcchhhC---CC-CCCceEE
Confidence 36789999999999999999998999999999 99999999999887653 366666665432 12 5689999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..+++.
T Consensus 102 ~~~~~l~~ 109 (199)
T 2xvm_A 102 LSTVVLMF 109 (199)
T ss_dssp EEESCGGG
T ss_pred EEcchhhh
Confidence 99998764
No 23
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.05 E-value=1.2e-09 Score=86.96 Aligned_cols=84 Identities=13% Similarity=0.039 Sum_probs=63.2
Q ss_pred cCCCEEEEECCccCHHHHHHHHcC--CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g--~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
.++.+|||+|||+|.++..+++.+ .+|+++|+ +.+++.+++|+..++.......++.+...+... ......+||
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~---~~~~~~~fD 104 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTY---QDKRFHGYD 104 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTS---CCGGGCSCS
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccc---ccccCCCcC
Confidence 367899999999999999999875 48999999 999999999987765431001246666666422 222346899
Q ss_pred EEEEcceeee
Q 028335 198 YGNESLLLFL 207 (210)
Q Consensus 198 ~Iia~DviY~ 207 (210)
+|++.++++.
T Consensus 105 ~v~~~~~l~~ 114 (217)
T 3jwh_A 105 AATVIEVIEH 114 (217)
T ss_dssp EEEEESCGGG
T ss_pred EEeeHHHHHc
Confidence 9999998863
No 24
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.05 E-value=6.4e-10 Score=85.30 Aligned_cols=88 Identities=14% Similarity=0.015 Sum_probs=66.4
Q ss_pred HHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEee
Q 028335 104 VVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELT 182 (210)
Q Consensus 104 ~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~ 182 (210)
..+..++..... ..++.+|||+|||+|.+++.+++.+.+|+++|. +.+++.+++|+..++.. ++.+...+
T Consensus 21 ~~~~~~~~~~~~----~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~~~~~~~d 91 (183)
T 2yxd_A 21 EEIRAVSIGKLN----LNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIK-----NCQIIKGR 91 (183)
T ss_dssp HHHHHHHHHHHC----CCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCC-----SEEEEESC
T ss_pred HHHHHHHHHHcC----CCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCC-----cEEEEECC
Confidence 344445544332 346789999999999999999997779999999 99999999999988753 46666665
Q ss_pred CCCCCCCCccCCCCcEEEEcce
Q 028335 183 WGDDPDQDLIQPLPDYGNESLL 204 (210)
Q Consensus 183 w~~~~~~~~~~~~fD~Iia~Dv 204 (210)
+.+ .+.+.+||+|++..+
T Consensus 92 ~~~----~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 92 AED----VLDKLEFNKAFIGGT 109 (183)
T ss_dssp HHH----HGGGCCCSEEEECSC
T ss_pred ccc----cccCCCCcEEEECCc
Confidence 533 223468999999876
No 25
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.05 E-value=6e-10 Score=92.35 Aligned_cols=77 Identities=19% Similarity=0.243 Sum_probs=63.4
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|.+++.+++.|.+|+++|+ +.+++.+++++..++. ++.+...+..+.. ...+||+|
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~----~~~~fD~i 188 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENL------NISTALYDINAAN----IQENYDFI 188 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC------CEEEEECCGGGCC----CCSCEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCC------ceEEEEecccccc----ccCCccEE
Confidence 37889999999999999999999999999999 9999999999988864 3566665543321 15689999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..+++.
T Consensus 189 ~~~~~~~~ 196 (286)
T 3m70_A 189 VSTVVFMF 196 (286)
T ss_dssp EECSSGGG
T ss_pred EEccchhh
Confidence 99988763
No 26
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.05 E-value=1.5e-09 Score=89.10 Aligned_cols=95 Identities=12% Similarity=0.000 Sum_probs=71.5
Q ss_pred cHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc-CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEE
Q 028335 102 SGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVT 179 (210)
Q Consensus 102 aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~-g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~ 179 (210)
+...+...+..... ..++.+|||+|||+|..+..+++. +.+|+++|+ +.+++.+++++..+++. .++.+.
T Consensus 45 ~~~~~~~~l~~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~~~~~ 116 (273)
T 3bus_A 45 ATDRLTDEMIALLD----VRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLA----NRVTFS 116 (273)
T ss_dssp HHHHHHHHHHHHSC----CCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEE
T ss_pred HHHHHHHHHHHhcC----CCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCC----cceEEE
Confidence 34444455544321 346789999999999999999874 789999999 99999999999887764 457777
Q ss_pred EeeCCCCCCCCccCCCCcEEEEcceeee
Q 028335 180 ELTWGDDPDQDLIQPLPDYGNESLLLFL 207 (210)
Q Consensus 180 ~l~w~~~~~~~~~~~~fD~Iia~DviY~ 207 (210)
..+..+. .+.+.+||+|++.+++++
T Consensus 117 ~~d~~~~---~~~~~~fD~v~~~~~l~~ 141 (273)
T 3bus_A 117 YADAMDL---PFEDASFDAVWALESLHH 141 (273)
T ss_dssp ECCTTSC---CSCTTCEEEEEEESCTTT
T ss_pred ECccccC---CCCCCCccEEEEechhhh
Confidence 7765442 234568999999998875
No 27
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.05 E-value=1.2e-09 Score=91.36 Aligned_cols=78 Identities=17% Similarity=0.049 Sum_probs=65.1
Q ss_pred ccCCCEEEEECCccCHHHHHHHHc-CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~-g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
..++.+|||+|||+|.+++.+++. +.+|+++|+ +.+++.+++++..+++. .++.+...++.+. +.+||
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~------~~~fD 139 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSP----RRKEVRIQGWEEF------DEPVD 139 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCS----SCEEEEECCGGGC------CCCCS
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCC----CceEEEECCHHHc------CCCcc
Confidence 346789999999999999999987 889999999 99999999999888764 4577777765432 56899
Q ss_pred EEEEcceeee
Q 028335 198 YGNESLLLFL 207 (210)
Q Consensus 198 ~Iia~DviY~ 207 (210)
+|++..++.+
T Consensus 140 ~v~~~~~~~~ 149 (302)
T 3hem_A 140 RIVSLGAFEH 149 (302)
T ss_dssp EEEEESCGGG
T ss_pred EEEEcchHHh
Confidence 9999988754
No 28
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.05 E-value=6.2e-10 Score=88.85 Aligned_cols=84 Identities=17% Similarity=0.171 Sum_probs=65.5
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++++..++.......++.+...+... ..+...+||+|
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~D~v 105 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASS---LSFHDSSFDFA 105 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTS---CCSCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccc---cCCCCCceeEE
Confidence 36789999999999999999999999999999 999999999988776532222345565555433 22346789999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..+++.
T Consensus 106 ~~~~~l~~ 113 (235)
T 3sm3_A 106 VMQAFLTS 113 (235)
T ss_dssp EEESCGGG
T ss_pred EEcchhhc
Confidence 99988765
No 29
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.05 E-value=3.3e-10 Score=93.94 Aligned_cols=76 Identities=14% Similarity=0.114 Sum_probs=57.6
Q ss_pred ccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCC--CCccCCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD--QDLIQPLP 196 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~--~~~~~~~f 196 (210)
..++.+|||||||+|.+++.+++.+++|+++|. +.|++.+++|+..+.. ..+|.+... ......+|
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~v-----------~~~~~~~~~~~~~~~~~~f 111 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRCV-----------TIDLLDITAEIPKELAGHF 111 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSCC-----------EEEECCTTSCCCGGGTTCC
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhccc-----------eeeeeecccccccccCCCc
Confidence 346889999999999999999999999999999 9999999999765411 233332211 11124689
Q ss_pred cEEEEcceee
Q 028335 197 DYGNESLLLF 206 (210)
Q Consensus 197 D~Iia~DviY 206 (210)
|+|++..++.
T Consensus 112 D~Vv~~~~l~ 121 (261)
T 3iv6_A 112 DFVLNDRLIN 121 (261)
T ss_dssp SEEEEESCGG
T ss_pred cEEEEhhhhH
Confidence 9999988764
No 30
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.04 E-value=3.7e-09 Score=83.26 Aligned_cols=89 Identities=19% Similarity=0.240 Sum_probs=69.3
Q ss_pred eccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceE
Q 028335 100 WDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAV 177 (210)
Q Consensus 100 W~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~ 177 (210)
++....+.+++... ..++.+|||+|||+|.+++.+++.+. +|+++|+ +.+++.+++|+..++.. ++.
T Consensus 44 ~~~~~~~~~~l~~~------~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~ 112 (205)
T 3grz_A 44 HQTTQLAMLGIERA------MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIY-----DIA 112 (205)
T ss_dssp HHHHHHHHHHHHHH------CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-----CCE
T ss_pred CccHHHHHHHHHHh------ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----ceE
Confidence 45666666666643 23678999999999999999998866 8999999 99999999999988764 266
Q ss_pred EEEeeCCCCCCCCccCCCCcEEEEcce
Q 028335 178 VTELTWGDDPDQDLIQPLPDYGNESLL 204 (210)
Q Consensus 178 ~~~l~w~~~~~~~~~~~~fD~Iia~Dv 204 (210)
+...++.+. ...+||+|++..+
T Consensus 113 ~~~~d~~~~-----~~~~fD~i~~~~~ 134 (205)
T 3grz_A 113 LQKTSLLAD-----VDGKFDLIVANIL 134 (205)
T ss_dssp EEESSTTTT-----CCSCEEEEEEESC
T ss_pred EEecccccc-----CCCCceEEEECCc
Confidence 666665442 2468999998644
No 31
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.04 E-value=9.8e-10 Score=86.64 Aligned_cols=79 Identities=14% Similarity=0.101 Sum_probs=64.3
Q ss_pred CCCEEEEECCccCHHHHHHHHc-CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~-g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
+..+|||+|||+|.++..+++. +.+|+++|+ +.+++.+++++..++.. .++.+...+..+. .+.+.+||+|
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~---~~~~~~~D~v 115 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLN----DRIQIVQGDVHNI---PIEDNYADLI 115 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECBTTBC---SSCTTCEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhcccc----CceEEEEcCHHHC---CCCcccccEE
Confidence 3349999999999999999987 668999999 99999999999988764 4577777776442 2345789999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 116 ~~~~~l~~ 123 (219)
T 3dlc_A 116 VSRGSVFF 123 (219)
T ss_dssp EEESCGGG
T ss_pred EECchHhh
Confidence 99998765
No 32
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.04 E-value=1.1e-09 Score=86.57 Aligned_cols=78 Identities=14% Similarity=0.006 Sum_probs=63.0
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.+++|+..++.. ++.+...++.+.. ....+||+|
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~---~~~~~~D~i 147 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLH-----NVSTRHGDGWQGW---QARAPFDAI 147 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEESCGGGCC---GGGCCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCC-----ceEEEECCcccCC---ccCCCccEE
Confidence 47889999999999999999998899999999 99999999999987753 4666666654322 134689999
Q ss_pred EEcceee
Q 028335 200 NESLLLF 206 (210)
Q Consensus 200 ia~DviY 206 (210)
++..++.
T Consensus 148 ~~~~~~~ 154 (210)
T 3lbf_A 148 IVTAAPP 154 (210)
T ss_dssp EESSBCS
T ss_pred EEccchh
Confidence 9987653
No 33
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.04 E-value=8.2e-10 Score=91.49 Aligned_cols=80 Identities=20% Similarity=0.135 Sum_probs=64.9
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.+++++..++.. .++.+...+..+... +...+||+|+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~--~~~~~fD~v~ 141 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVS----DNMQFIHCAAQDVAS--HLETPVDLIL 141 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCG----GGEEEEESCGGGTGG--GCSSCEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC----cceEEEEcCHHHhhh--hcCCCceEEE
Confidence 4679999999999999999999999999999 99999999999887653 356777766544321 3457899999
Q ss_pred Ecceeee
Q 028335 201 ESLLLFL 207 (210)
Q Consensus 201 a~DviY~ 207 (210)
+..+++.
T Consensus 142 ~~~~l~~ 148 (285)
T 4htf_A 142 FHAVLEW 148 (285)
T ss_dssp EESCGGG
T ss_pred ECchhhc
Confidence 9998864
No 34
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.04 E-value=4.4e-10 Score=89.13 Aligned_cols=76 Identities=12% Similarity=-0.011 Sum_probs=62.0
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++++..+. ++.+...+..+.. ...+||+|
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~d~~~~~----~~~~fD~v 118 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWS-------HISWAATDILQFS----TAELFDLI 118 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCS-------SEEEEECCTTTCC----CSCCEEEE
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCC-------CeEEEEcchhhCC----CCCCccEE
Confidence 35679999999999999999998889999999 999999999876532 4667777654433 35689999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 119 ~~~~~l~~ 126 (216)
T 3ofk_A 119 VVAEVLYY 126 (216)
T ss_dssp EEESCGGG
T ss_pred EEccHHHh
Confidence 99988864
No 35
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.04 E-value=1.9e-09 Score=89.67 Aligned_cols=80 Identities=11% Similarity=0.007 Sum_probs=66.0
Q ss_pred cCCCEEEEECCccCHHHHHHHHc-CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~-g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.++.+|||+|||+|..+..+++. +.+|+++|+ +.+++.+++++...+.. .++.+...++.+. .+.+.+||+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~---~~~~~~fD~ 153 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLA----DNITVKYGSFLEI---PCEDNSYDF 153 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCT----TTEEEEECCTTSC---SSCTTCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCC----cceEEEEcCcccC---CCCCCCEeE
Confidence 47789999999999999999876 889999999 99999999999887764 4577777765442 234568999
Q ss_pred EEEcceeee
Q 028335 199 GNESLLLFL 207 (210)
Q Consensus 199 Iia~DviY~ 207 (210)
|++.+++++
T Consensus 154 v~~~~~l~~ 162 (297)
T 2o57_A 154 IWSQDAFLH 162 (297)
T ss_dssp EEEESCGGG
T ss_pred EEecchhhh
Confidence 999999865
No 36
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.04 E-value=1.4e-09 Score=86.48 Aligned_cols=76 Identities=22% Similarity=0.214 Sum_probs=60.4
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|.+++.+++.+.+|+++|+ +.+++.+++|++.++.. .++.+...+..+... ..++||+|
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~----~~v~~~~~d~~~~~~---~~~~~D~v 126 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLS----PRMRAVQGTAPAALA---DLPLPEAV 126 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCTTGGGT---TSCCCSEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC----CCEEEEeCchhhhcc---cCCCCCEE
Confidence 46789999999999999999998889999999 99999999999988764 356666655433111 23579999
Q ss_pred EEcc
Q 028335 200 NESL 203 (210)
Q Consensus 200 ia~D 203 (210)
+...
T Consensus 127 ~~~~ 130 (204)
T 3njr_A 127 FIGG 130 (204)
T ss_dssp EECS
T ss_pred EECC
Confidence 8754
No 37
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.03 E-value=1.3e-09 Score=93.69 Aligned_cols=78 Identities=21% Similarity=0.198 Sum_probs=64.7
Q ss_pred ccCCCEEEEECCccCHHHHHHHHcCC-EEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALLGA-QVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
..++++|||+|||+|.+++.+++.++ +|+++|+..+++.+++|+..|+.. +++.+...++.+. .+...+||+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~----~~v~~~~~d~~~~---~~~~~~fD~ 136 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLD----HVVTIIKGKVEEV---ELPVEKVDI 136 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCT----TTEEEEESCTTTC---CCSSSCEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCC----CcEEEEECcHHHc---cCCCCceEE
Confidence 46889999999999999999999877 899999944999999999999875 4577877776554 234578999
Q ss_pred EEEcce
Q 028335 199 GNESLL 204 (210)
Q Consensus 199 Iia~Dv 204 (210)
|++.-+
T Consensus 137 Iis~~~ 142 (349)
T 3q7e_A 137 IISEWM 142 (349)
T ss_dssp EEECCC
T ss_pred EEEccc
Confidence 998654
No 38
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.03 E-value=4.9e-10 Score=87.46 Aligned_cols=78 Identities=19% Similarity=0.140 Sum_probs=60.0
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.++++|||+|||+|.+++.++..+. +|+++|+ +.+++.+++|+..++.. ++.+...++.+... .+.+.+||+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~~-~~~~~~fD~ 116 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLS-----GATLRRGAVAAVVA-AGTTSPVDL 116 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCS-----CEEEEESCHHHHHH-HCCSSCCSE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEEccHHHHHh-hccCCCccE
Confidence 4788999999999999998887766 7999999 99999999999998753 46666665433211 112468999
Q ss_pred EEEcce
Q 028335 199 GNESLL 204 (210)
Q Consensus 199 Iia~Dv 204 (210)
|++...
T Consensus 117 i~~~~p 122 (189)
T 3p9n_A 117 VLADPP 122 (189)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 998654
No 39
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.03 E-value=4e-10 Score=92.55 Aligned_cols=77 Identities=13% Similarity=0.097 Sum_probs=59.7
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
++.+|||+|||+|.+++.++.. +.+|+++|. +.+++.+++|+..+++. ++.+...+..+.........+||+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-----~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-----GARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-----SEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-----ceEEEECcHHHhhcccccCCCceE
Confidence 5789999999999999999976 568999999 99999999999998864 366666654332211112368999
Q ss_pred EEEcc
Q 028335 199 GNESL 203 (210)
Q Consensus 199 Iia~D 203 (210)
|++.-
T Consensus 155 I~s~a 159 (249)
T 3g89_A 155 AVARA 159 (249)
T ss_dssp EEEES
T ss_pred EEECC
Confidence 99853
No 40
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.02 E-value=4.8e-10 Score=90.28 Aligned_cols=79 Identities=13% Similarity=-0.053 Sum_probs=62.6
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
+++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.+++++..++.. .++.+...++.+.. ...+||+|
T Consensus 65 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~----~~~~fD~v 136 (235)
T 3lcc_A 65 LPLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKA----EYFSFVKEDVFTWR----PTELFDLI 136 (235)
T ss_dssp SCCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGG----GGEEEECCCTTTCC----CSSCEEEE
T ss_pred CCCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCC----cceEEEECchhcCC----CCCCeeEE
Confidence 35569999999999999999988889999999 99999999998765432 35677766655432 23589999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..+++.
T Consensus 137 ~~~~~l~~ 144 (235)
T 3lcc_A 137 FDYVFFCA 144 (235)
T ss_dssp EEESSTTT
T ss_pred EEChhhhc
Confidence 99988753
No 41
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.02 E-value=1.3e-09 Score=88.99 Aligned_cols=79 Identities=15% Similarity=0.101 Sum_probs=63.7
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++++..++.. ++.+...+..+. .+.+.+||+|
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-----~v~~~~~d~~~l---~~~~~~fD~V 107 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQ-----QVEYVQGDAEQM---PFTDERFHIV 107 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEECCC-CC---CSCTTCEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCC-----ceEEEEecHHhC---CCCCCCEEEE
Confidence 36789999999999999999988889999999 99999999999887653 466666654332 2345689999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 108 ~~~~~l~~ 115 (260)
T 1vl5_A 108 TCRIAAHH 115 (260)
T ss_dssp EEESCGGG
T ss_pred EEhhhhHh
Confidence 99988754
No 42
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.02 E-value=2.3e-09 Score=84.53 Aligned_cols=77 Identities=17% Similarity=0.156 Sum_probs=61.3
Q ss_pred cCCCEEEEECCccCHHHHHHHHcC--CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g--~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
.++.+|||+|||+|.+++.+++.+ .+|+++|+ +.+++.+++|+..++.. ++.+...++.+... ..++||
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~~---~~~~~D 110 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVAR-----NVTLVEAFAPEGLD---DLPDPD 110 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCT-----TEEEEECCTTTTCT---TSCCCS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-----cEEEEeCChhhhhh---cCCCCC
Confidence 467899999999999999999886 68999999 99999999999988753 46666666533322 125799
Q ss_pred EEEEccee
Q 028335 198 YGNESLLL 205 (210)
Q Consensus 198 ~Iia~Dvi 205 (210)
+|++....
T Consensus 111 ~i~~~~~~ 118 (204)
T 3e05_A 111 RVFIGGSG 118 (204)
T ss_dssp EEEESCCT
T ss_pred EEEECCCC
Confidence 99987654
No 43
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.01 E-value=3.2e-09 Score=84.44 Aligned_cols=74 Identities=15% Similarity=0.080 Sum_probs=60.8
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++|+..++. ++.+...+..+. .+...+||+|+
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~---~~~~~~~D~v~ 108 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRES------NVEFIVGDARKL---SFEDKTFDYVI 108 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC------CCEEEECCTTSC---CSCTTCEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC------CceEEECchhcC---CCCCCcEEEEE
Confidence 4789999999999999999999889999999 9999999999987752 356666665432 23346899999
Q ss_pred Ecce
Q 028335 201 ESLL 204 (210)
Q Consensus 201 a~Dv 204 (210)
+.++
T Consensus 109 ~~~~ 112 (227)
T 1ve3_A 109 FIDS 112 (227)
T ss_dssp EESC
T ss_pred EcCc
Confidence 9988
No 44
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.01 E-value=2.7e-09 Score=91.38 Aligned_cols=78 Identities=19% Similarity=0.200 Sum_probs=62.4
Q ss_pred ccCCCEEEEECCccCHHHHHHHHcCC-EEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALLGA-QVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
..++++|||+|||+|.+++.+++.|+ +|+++|...+++.+++|+..|+.. .++.+...+..+. .+...+||+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~~----~~i~~~~~d~~~~---~~~~~~~D~ 134 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLE----DTITLIKGKIEEV---HLPVEKVDV 134 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCT----TTEEEEESCTTTS---CCSCSCEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCCC----CcEEEEEeeHHHh---cCCCCcEEE
Confidence 45788999999999999999999876 899999933999999999998864 4577776665432 233468999
Q ss_pred EEEcce
Q 028335 199 GNESLL 204 (210)
Q Consensus 199 Iia~Dv 204 (210)
|++..+
T Consensus 135 Ivs~~~ 140 (340)
T 2fyt_A 135 IISEWM 140 (340)
T ss_dssp EEECCC
T ss_pred EEEcCc
Confidence 998764
No 45
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.00 E-value=6.4e-10 Score=92.60 Aligned_cols=73 Identities=21% Similarity=0.243 Sum_probs=59.5
Q ss_pred CCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
++++|||+|||+|.+++.+++.++ +|+++|+ +.+++.+++|+..|+.. +++.+...+..+... ..+||+|
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~----~~v~~~~~D~~~~~~----~~~fD~V 196 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVE----DRMSAYNMDNRDFPG----ENIADRI 196 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCT----TTEEEECSCTTTCCC----CSCEEEE
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCC----ceEEEEECCHHHhcc----cCCccEE
Confidence 588999999999999999999887 5999999 99999999999999875 346666555433321 5689999
Q ss_pred EEc
Q 028335 200 NES 202 (210)
Q Consensus 200 ia~ 202 (210)
++.
T Consensus 197 i~~ 199 (278)
T 2frn_A 197 LMG 199 (278)
T ss_dssp EEC
T ss_pred EEC
Confidence 873
No 46
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.00 E-value=4e-10 Score=92.93 Aligned_cols=91 Identities=16% Similarity=0.106 Sum_probs=68.4
Q ss_pred ccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcC--CEEEEEeh-HHHHHHHHHHHHH---hccCCCCCC
Q 028335 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIEN---NLRHGDLRG 174 (210)
Q Consensus 101 ~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g--~~Vv~tD~-~~~l~~~~~N~~~---n~~~~~~~~ 174 (210)
-.+++|+.|+. ..++.+|||||||+|.+++.+++.. .+|+++|+ +.+++.+++|+.. |++. .
T Consensus 23 ~D~~lL~~~~~--------~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~----~ 90 (260)
T 2ozv_A 23 MDAMLLASLVA--------DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFS----A 90 (260)
T ss_dssp CHHHHHHHTCC--------CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTG----G
T ss_pred cHHHHHHHHhc--------ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCc----c
Confidence 45777777754 2367799999999999999999874 58999999 9999999999988 6654 4
Q ss_pred ceEEEEeeCCCCCC----CCccCCCCcEEEEcc
Q 028335 175 SAVVTELTWGDDPD----QDLIQPLPDYGNESL 203 (210)
Q Consensus 175 ~~~~~~l~w~~~~~----~~~~~~~fD~Iia~D 203 (210)
++.+...++.+... ..+...+||+|++.-
T Consensus 91 ~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nP 123 (260)
T 2ozv_A 91 RIEVLEADVTLRAKARVEAGLPDEHFHHVIMNP 123 (260)
T ss_dssp GEEEEECCTTCCHHHHHHTTCCTTCEEEEEECC
T ss_pred eEEEEeCCHHHHhhhhhhhccCCCCcCEEEECC
Confidence 57777777654311 012346799999863
No 47
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.00 E-value=1.7e-09 Score=85.87 Aligned_cols=79 Identities=11% Similarity=0.093 Sum_probs=64.4
Q ss_pred cCCCEEEEECCccCHHHHHHHHcC---CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLG---AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g---~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
.++.+|||+|||+|..+..+++.+ .+|+++|. +.+++.+++++..++.. ++.+...+..+. .+.+.+|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~~~d~~~~---~~~~~~f 107 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-----NVEVLKSEENKI---PLPDNTV 107 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-----TEEEEECBTTBC---SSCSSCE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-----cEEEEecccccC---CCCCCCe
Confidence 367899999999999999999875 68999999 99999999999888754 466666665432 2345689
Q ss_pred cEEEEcceeee
Q 028335 197 DYGNESLLLFL 207 (210)
Q Consensus 197 D~Iia~DviY~ 207 (210)
|+|++..+++.
T Consensus 108 D~v~~~~~l~~ 118 (219)
T 3dh0_A 108 DFIFMAFTFHE 118 (219)
T ss_dssp EEEEEESCGGG
T ss_pred eEEEeehhhhh
Confidence 99999998864
No 48
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.00 E-value=1.9e-09 Score=86.40 Aligned_cols=74 Identities=18% Similarity=0.244 Sum_probs=59.5
Q ss_pred cCCCEEEEECCc-cCHHHHHHHHc-CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 121 LHGKKIVELGSG-CGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcG-tGl~~l~la~~-g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
.++.+|||+||| +|.+++.+++. +.+|+++|+ +.+++.+++|+..++. ++.+...++..... +.+.+||
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~v~~~~~d~~~~~~--~~~~~fD 125 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS------NVRLVKSNGGIIKG--VVEGTFD 125 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC------CCEEEECSSCSSTT--TCCSCEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC------CcEEEeCCchhhhh--cccCcee
Confidence 368899999999 99999999988 889999999 9999999999999875 35666666432211 2346899
Q ss_pred EEEEc
Q 028335 198 YGNES 202 (210)
Q Consensus 198 ~Iia~ 202 (210)
+|++.
T Consensus 126 ~I~~n 130 (230)
T 3evz_A 126 VIFSA 130 (230)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99965
No 49
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.99 E-value=2e-09 Score=89.98 Aligned_cols=87 Identities=17% Similarity=0.163 Sum_probs=66.3
Q ss_pred HHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc-CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEE
Q 028335 103 GVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTE 180 (210)
Q Consensus 103 a~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~-g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~ 180 (210)
+..+.+++..... ..++.+|||+|||+|.+++.+++. +.+|+++|+ +.+++.+++|+..+++. +++.+..
T Consensus 108 te~lv~~~l~~~~----~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~----~~v~~~~ 179 (284)
T 1nv8_A 108 TEELVELALELIR----KYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVS----DRFFVRK 179 (284)
T ss_dssp HHHHHHHHHHHHH----HHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCT----TSEEEEE
T ss_pred HHHHHHHHHHHhc----ccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CceEEEE
Confidence 4445555544321 125679999999999999999988 779999999 99999999999998765 4578888
Q ss_pred eeCCCCCCCCccCCCC---cEEEEc
Q 028335 181 LTWGDDPDQDLIQPLP---DYGNES 202 (210)
Q Consensus 181 l~w~~~~~~~~~~~~f---D~Iia~ 202 (210)
.+|.+.. ..+| |+|++.
T Consensus 180 ~D~~~~~-----~~~f~~~D~Ivsn 199 (284)
T 1nv8_A 180 GEFLEPF-----KEKFASIEMILSN 199 (284)
T ss_dssp SSTTGGG-----GGGTTTCCEEEEC
T ss_pred Ccchhhc-----ccccCCCCEEEEc
Confidence 7775532 1367 999985
No 50
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.99 E-value=3.1e-09 Score=86.65 Aligned_cols=79 Identities=15% Similarity=0.107 Sum_probs=59.8
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCcc---CCC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLI---QPL 195 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~---~~~ 195 (210)
++.+|||+|||+|.+++.+++. +.+|+++|+ +.+++.+++|+..+++. +++.+...+..+.....+. +.+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLS----DLIKVVKVPQKTLLMDALKEESEII 140 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEECCTTCSSTTTSTTCCSCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCC----ccEEEEEcchhhhhhhhhhcccCCc
Confidence 5679999999999999988865 679999999 99999999999988764 4577777664331111122 247
Q ss_pred CcEEEEcce
Q 028335 196 PDYGNESLL 204 (210)
Q Consensus 196 fD~Iia~Dv 204 (210)
||+|++.-.
T Consensus 141 fD~i~~npp 149 (254)
T 2h00_A 141 YDFCMCNPP 149 (254)
T ss_dssp BSEEEECCC
T ss_pred ccEEEECCC
Confidence 999998643
No 51
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.98 E-value=5.8e-09 Score=92.13 Aligned_cols=90 Identities=13% Similarity=-0.014 Sum_probs=67.9
Q ss_pred HHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEe
Q 028335 103 GVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTEL 181 (210)
Q Consensus 103 a~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l 181 (210)
+..+..++..... ..++.+|||||||+|.+++.+++.+.+|+++|+ +.+++.+++|+..|++. ++.+...
T Consensus 271 ~e~l~~~~~~~l~----~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~-----~v~f~~~ 341 (433)
T 1uwv_A 271 NQKMVARALEWLD----VQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQ-----NVTFYHE 341 (433)
T ss_dssp HHHHHHHHHHHHT----CCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEEC
T ss_pred HHHHHHHHHHhhc----CCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCC-----ceEEEEC
Confidence 4445555544322 236779999999999999999998889999999 99999999999998764 5777777
Q ss_pred eCCCCCCC-CccCCCCcEEEE
Q 028335 182 TWGDDPDQ-DLIQPLPDYGNE 201 (210)
Q Consensus 182 ~w~~~~~~-~~~~~~fD~Iia 201 (210)
++.+.... .+...+||+|++
T Consensus 342 d~~~~l~~~~~~~~~fD~Vv~ 362 (433)
T 1uwv_A 342 NLEEDVTKQPWAKNGFDKVLL 362 (433)
T ss_dssp CTTSCCSSSGGGTTCCSEEEE
T ss_pred CHHHHhhhhhhhcCCCCEEEE
Confidence 77654321 233457999885
No 52
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.98 E-value=3.2e-09 Score=84.41 Aligned_cols=75 Identities=16% Similarity=-0.043 Sum_probs=59.7
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
++.+|||||||+|.+++.+++. +.+|+++|+ +.+++.+++|+..+++. ++.+...++.+. ...+...+||+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~-----~v~~~~~d~~~~-~~~~~~~~~D~ 114 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVP-----NIKLLWVDGSDL-TDYFEDGEIDR 114 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCS-----SEEEEECCSSCG-GGTSCTTCCSE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCC-----CEEEEeCCHHHH-HhhcCCCCCCE
Confidence 5779999999999999999987 468999999 99999999999988753 567777766442 11134567999
Q ss_pred EEEc
Q 028335 199 GNES 202 (210)
Q Consensus 199 Iia~ 202 (210)
|++.
T Consensus 115 i~~~ 118 (214)
T 1yzh_A 115 LYLN 118 (214)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9976
No 53
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.97 E-value=3.4e-09 Score=87.72 Aligned_cols=78 Identities=17% Similarity=0.090 Sum_probs=62.6
Q ss_pred ccCCCEEEEECCccCHHHHHHH-HcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 120 LLHGKKIVELGSGCGLVGCIAA-LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la-~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
..++.+|||+|||+|.++..++ +.+.+|+++|+ +.+++.+++++...+.. .++.+...++.+. . .+||
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~-----~-~~fD 131 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENL----RSKRVLLAGWEQF-----D-EPVD 131 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCC----SCEEEEESCGGGC-----C-CCCS
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCC----CCeEEEECChhhC-----C-CCee
Confidence 3467899999999999999988 56889999999 99999999998876653 3566666665321 2 6899
Q ss_pred EEEEcceeee
Q 028335 198 YGNESLLLFL 207 (210)
Q Consensus 198 ~Iia~DviY~ 207 (210)
+|++.+++++
T Consensus 132 ~v~~~~~l~~ 141 (287)
T 1kpg_A 132 RIVSIGAFEH 141 (287)
T ss_dssp EEEEESCGGG
T ss_pred EEEEeCchhh
Confidence 9999998764
No 54
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.97 E-value=1.6e-09 Score=88.14 Aligned_cols=93 Identities=14% Similarity=0.128 Sum_probs=68.2
Q ss_pred ccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc-CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEE
Q 028335 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVV 178 (210)
Q Consensus 101 ~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~-g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~ 178 (210)
+.+..+...+.... ...++.+|||+|||+|.++..+++. +.+|+++|+ +.+++.+++++..+ .++.+
T Consensus 38 ~~~~~~~~~~~~~~----~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~ 106 (266)
T 3ujc_A 38 SGGLEATKKILSDI----ELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-------NKIIF 106 (266)
T ss_dssp TTHHHHHHHHTTTC----CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-------TTEEE
T ss_pred cchHHHHHHHHHhc----CCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-------CCeEE
Confidence 44444445554432 1346789999999999999999986 889999999 89999998876543 24666
Q ss_pred EEeeCCCCCCCCccCCCCcEEEEcceeee
Q 028335 179 TELTWGDDPDQDLIQPLPDYGNESLLLFL 207 (210)
Q Consensus 179 ~~l~w~~~~~~~~~~~~fD~Iia~DviY~ 207 (210)
...+..+. .+.+.+||+|++.+++++
T Consensus 107 ~~~d~~~~---~~~~~~fD~v~~~~~l~~ 132 (266)
T 3ujc_A 107 EANDILTK---EFPENNFDLIYSRDAILA 132 (266)
T ss_dssp EECCTTTC---CCCTTCEEEEEEESCGGG
T ss_pred EECccccC---CCCCCcEEEEeHHHHHHh
Confidence 66665443 234578999999998865
No 55
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.96 E-value=2.3e-09 Score=93.04 Aligned_cols=79 Identities=19% Similarity=0.211 Sum_probs=63.9
Q ss_pred ccCCCEEEEECCccCHHHHHHHHcCC-EEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALLGA-QVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
..++++|||||||+|.+++.+++.|+ +|+++|...+++.+++++..|+.. +++.+...+..+.. + ..+||+
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~---~-~~~~D~ 132 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLD----HIVEVIEGSVEDIS---L-PEKVDV 132 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTCT----TTEEEEESCGGGCC---C-SSCEEE
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCCC----CeEEEEECchhhcC---c-CCcceE
Confidence 56889999999999999999999988 899999988899999999999875 45777776654332 1 268999
Q ss_pred EEEcceee
Q 028335 199 GNESLLLF 206 (210)
Q Consensus 199 Iia~DviY 206 (210)
|++.-+.|
T Consensus 133 Iv~~~~~~ 140 (376)
T 3r0q_C 133 IISEWMGY 140 (376)
T ss_dssp EEECCCBT
T ss_pred EEEcChhh
Confidence 99844333
No 56
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.95 E-value=1.7e-09 Score=82.83 Aligned_cols=78 Identities=12% Similarity=-0.019 Sum_probs=59.2
Q ss_pred cCCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccC--CC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQ--PL 195 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~--~~ 195 (210)
.++.+|||+|||+|.+++.+++. +.+|+++|+ +.+++.+++|+..++.. .++ +...+..+ .+.. .+
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~-~~~~d~~~----~~~~~~~~ 94 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVS----DRI-AVQQGAPR----AFDDVPDN 94 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCT----TSE-EEECCTTG----GGGGCCSC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCC----CCE-EEecchHh----hhhccCCC
Confidence 46779999999999999999987 568999999 89999999999887654 244 44433222 2222 68
Q ss_pred CcEEEEcceeee
Q 028335 196 PDYGNESLLLFL 207 (210)
Q Consensus 196 fD~Iia~DviY~ 207 (210)
||+|++..++++
T Consensus 95 ~D~i~~~~~~~~ 106 (178)
T 3hm2_A 95 PDVIFIGGGLTA 106 (178)
T ss_dssp CSEEEECC-TTC
T ss_pred CCEEEECCcccH
Confidence 999999887654
No 57
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.95 E-value=4.5e-09 Score=89.46 Aligned_cols=78 Identities=24% Similarity=0.284 Sum_probs=62.0
Q ss_pred ccCCCEEEEECCccCHHHHHHHHcCC-EEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALLGA-QVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
..++++|||+|||+|.+++.+++.|+ +|+++|...+++.+++|+..|+.. +++.+...+..+. .+...+||+
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~----~~i~~~~~d~~~~---~~~~~~~D~ 108 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFS----DKITLLRGKLEDV---HLPFPKVDI 108 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCT----TTEEEEESCTTTS---CCSSSCEEE
T ss_pred hcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCCC----CCEEEEECchhhc---cCCCCcccE
Confidence 35788999999999999999999876 899999955899999999998865 4577766665432 233468999
Q ss_pred EEEcce
Q 028335 199 GNESLL 204 (210)
Q Consensus 199 Iia~Dv 204 (210)
|++.-+
T Consensus 109 Ivs~~~ 114 (328)
T 1g6q_1 109 IISEWM 114 (328)
T ss_dssp EEECCC
T ss_pred EEEeCc
Confidence 998744
No 58
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.94 E-value=3e-09 Score=88.85 Aligned_cols=79 Identities=16% Similarity=0.042 Sum_probs=63.1
Q ss_pred CCCEEEEECCccCHHHHHHHH---cCCEEEEEeh-HHHHHHHHHHHHHh-ccCCCCCCceEEEEeeCCCCCCCCccC---
Q 028335 122 HGKKIVELGSGCGLVGCIAAL---LGAQVILTDL-PDRLRLLKKNIENN-LRHGDLRGSAVVTELTWGDDPDQDLIQ--- 193 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~---~g~~Vv~tD~-~~~l~~~~~N~~~n-~~~~~~~~~~~~~~l~w~~~~~~~~~~--- 193 (210)
++.+|||+|||+|..+..+++ .+.+|+++|+ +.+++.+++++..+ +.. .++.+...+..+.. +..
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~~v~~~~~d~~~~~---~~~~~~ 108 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTY----KNVSFKISSSDDFK---FLGADS 108 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CC----TTEEEEECCTTCCG---GGCTTT
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCC----CceEEEEcCHHhCC---cccccc
Confidence 678999999999999999994 4679999999 99999999999886 222 46777777765432 233
Q ss_pred ---CCCcEEEEcceeee
Q 028335 194 ---PLPDYGNESLLLFL 207 (210)
Q Consensus 194 ---~~fD~Iia~DviY~ 207 (210)
.+||+|+++.+++.
T Consensus 109 ~~~~~fD~V~~~~~l~~ 125 (299)
T 3g5t_A 109 VDKQKIDMITAVECAHW 125 (299)
T ss_dssp TTSSCEEEEEEESCGGG
T ss_pred ccCCCeeEEeHhhHHHH
Confidence 68999999998764
No 59
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.94 E-value=1.1e-09 Score=88.71 Aligned_cols=77 Identities=14% Similarity=0.114 Sum_probs=58.1
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
++.+|||+|||+|.+++.++.. +.+|+++|. +.+++.+++|+..++.. ++.+...+..+.........+||+
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~~~~~~~~~fD~ 144 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-----NTTFCHDRAETFGQRKDVRESYDI 144 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-----SEEEEESCHHHHTTCTTTTTCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CEEEEeccHHHhcccccccCCccE
Confidence 6789999999999999999953 668999999 99999999999988764 366666554322110001457999
Q ss_pred EEEcc
Q 028335 199 GNESL 203 (210)
Q Consensus 199 Iia~D 203 (210)
|++..
T Consensus 145 V~~~~ 149 (240)
T 1xdz_A 145 VTARA 149 (240)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99865
No 60
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.94 E-value=8.7e-10 Score=87.37 Aligned_cols=76 Identities=14% Similarity=-0.054 Sum_probs=57.2
Q ss_pred CCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
++.+|||+|||+|.+++.++..++ +|+++|+ +.+++.+++|+..++.. ++.+...+..+... ....+||+|
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~-----~v~~~~~D~~~~~~--~~~~~fD~V 126 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAG-----NARVVNSNAMSFLA--QKGTPHNIV 126 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCC-----SEEEECSCHHHHHS--SCCCCEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCC-----cEEEEECCHHHHHh--hcCCCCCEE
Confidence 678999999999999998877775 8999999 99999999999988752 35555444322111 123579999
Q ss_pred EEcce
Q 028335 200 NESLL 204 (210)
Q Consensus 200 ia~Dv 204 (210)
++.-.
T Consensus 127 ~~~~p 131 (202)
T 2fpo_A 127 FVDPP 131 (202)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 87544
No 61
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.93 E-value=5.1e-09 Score=88.07 Aligned_cols=78 Identities=18% Similarity=0.072 Sum_probs=62.9
Q ss_pred ccCCCEEEEECCccCHHHHHHHHc-CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~-g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
..++.+|||+|||+|.++..+++. +.+|+++|+ +.+++.+++++..+++. .++.+...+..+. ..+||
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~------~~~fD 157 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTN----RSRQVLLQGWEDF------AEPVD 157 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCS----SCEEEEESCGGGC------CCCCS
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC----CceEEEECChHHC------CCCcC
Confidence 346789999999999999999977 889999999 99999999999877654 3466666554322 25799
Q ss_pred EEEEcceeee
Q 028335 198 YGNESLLLFL 207 (210)
Q Consensus 198 ~Iia~DviY~ 207 (210)
+|++..++++
T Consensus 158 ~v~~~~~l~~ 167 (318)
T 2fk8_A 158 RIVSIEAFEH 167 (318)
T ss_dssp EEEEESCGGG
T ss_pred EEEEeChHHh
Confidence 9999988754
No 62
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.93 E-value=1.7e-09 Score=90.42 Aligned_cols=75 Identities=19% Similarity=0.163 Sum_probs=60.3
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.+|.+|||+|||+|.+++.+|+.|+ +|+++|+ +.+++.+++|++.|++. +++.+...|..+. .....||.
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~----~~v~~~~~D~~~~----~~~~~~D~ 195 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVE----DRMSAYNMDNRDF----PGENIADR 195 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCT----TTEEEECSCTTTC----CCCSCEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEeCcHHHh----ccccCCCE
Confidence 3789999999999999999999875 8999999 99999999999999986 4566665553221 13457898
Q ss_pred EEEcc
Q 028335 199 GNESL 203 (210)
Q Consensus 199 Iia~D 203 (210)
|+...
T Consensus 196 Vi~~~ 200 (278)
T 3k6r_A 196 ILMGY 200 (278)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 88654
No 63
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.93 E-value=1.7e-09 Score=90.52 Aligned_cols=48 Identities=19% Similarity=0.364 Sum_probs=40.1
Q ss_pred ccCCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhc
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNL 167 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~ 167 (210)
.+++++|||+|||+|.+++.+++. +.+|+++|+ +.+++.+++|+..+.
T Consensus 44 ~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~ 94 (292)
T 3g07_A 44 WFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYL 94 (292)
T ss_dssp GTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----
T ss_pred hcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhh
Confidence 457899999999999999999986 569999999 999999999876543
No 64
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.93 E-value=9.5e-10 Score=84.94 Aligned_cols=80 Identities=19% Similarity=0.084 Sum_probs=60.5
Q ss_pred cCCCEEEEECCccCHHHHHHHHcC-CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCC-CccCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DLIQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g-~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~-~~~~~~fD 197 (210)
.++.+|||+|||+|.+++.+++.+ .+|+++|+ +.+++.+++|+..++.. .++.+...++.+.... ...+.+||
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~fD 118 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEP----EKFEVRKMDANRALEQFYEEKLQFD 118 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCG----GGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCC----cceEEEECcHHHHHHHHHhcCCCCC
Confidence 478899999999999999888876 48999999 99999999999988753 3566666654331110 01146899
Q ss_pred EEEEcce
Q 028335 198 YGNESLL 204 (210)
Q Consensus 198 ~Iia~Dv 204 (210)
+|++...
T Consensus 119 ~i~~~~~ 125 (187)
T 2fhp_A 119 LVLLDPP 125 (187)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9997655
No 65
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.93 E-value=3.6e-09 Score=87.03 Aligned_cols=80 Identities=21% Similarity=0.160 Sum_probs=64.2
Q ss_pred ccCCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
..++.+|||+|||+|..+..+++. +.+|+++|+ +.+++.+++++..++.. ++.+...+.... .+...+|
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~~~d~~~~---~~~~~~f 106 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-----NVKFLQANIFSL---PFEDSSF 106 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEECCGGGC---CSCTTCE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CcEEEEcccccC---CCCCCCe
Confidence 347889999999999999999987 569999999 99999999999888753 466666554332 2345789
Q ss_pred cEEEEcceeee
Q 028335 197 DYGNESLLLFL 207 (210)
Q Consensus 197 D~Iia~DviY~ 207 (210)
|+|++..+++.
T Consensus 107 D~v~~~~~l~~ 117 (276)
T 3mgg_A 107 DHIFVCFVLEH 117 (276)
T ss_dssp EEEEEESCGGG
T ss_pred eEEEEechhhh
Confidence 99999988764
No 66
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.93 E-value=1e-09 Score=87.02 Aligned_cols=95 Identities=6% Similarity=-0.122 Sum_probs=64.1
Q ss_pred HHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccC--C-----CCCCc
Q 028335 104 VVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRH--G-----DLRGS 175 (210)
Q Consensus 104 ~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~--~-----~~~~~ 175 (210)
..+.+|+... .+.++.+|||+|||+|..+..+++.|.+|+++|+ +.|++.++++...+... . ....+
T Consensus 9 ~~l~~~~~~l-----~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 83 (203)
T 1pjz_A 9 KDLQQYWSSL-----NVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPG 83 (203)
T ss_dssp HHHHHHHHHH-----CCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSS
T ss_pred HHHHHHHHhc-----ccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCc
Confidence 4455666532 1236789999999999999999999999999999 99999998875431000 0 00124
Q ss_pred eEEEEeeCCCCCCCCccC-CCCcEEEEcceee
Q 028335 176 AVVTELTWGDDPDQDLIQ-PLPDYGNESLLLF 206 (210)
Q Consensus 176 ~~~~~l~w~~~~~~~~~~-~~fD~Iia~DviY 206 (210)
+.+...+..+. ...+ .+||+|++..+++
T Consensus 84 v~~~~~d~~~l---~~~~~~~fD~v~~~~~l~ 112 (203)
T 1pjz_A 84 IEIWCGDFFAL---TARDIGHCAAFYDRAAMI 112 (203)
T ss_dssp SEEEEECCSSS---THHHHHSEEEEEEESCGG
T ss_pred cEEEECccccC---CcccCCCEEEEEECcchh
Confidence 66666654332 2222 5799999876654
No 67
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.92 E-value=1.1e-09 Score=90.94 Aligned_cols=84 Identities=14% Similarity=0.028 Sum_probs=60.1
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||||||+|..++.++..+++|+++|+ +.+++.+++|+........ ..++.+...++.......+...+||+|+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~fD~V~ 135 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPA-FDKWVIEEANWLTLDKDVPAGDGFDAVI 135 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHH-HHTCEEEECCGGGHHHHSCCTTCEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccc-cceeeEeecChhhCccccccCCCeEEEE
Confidence 6789999999999999999999999999999 9999999998755432100 0134444444432210013456899999
Q ss_pred Ec-ceee
Q 028335 201 ES-LLLF 206 (210)
Q Consensus 201 a~-DviY 206 (210)
+. .++.
T Consensus 136 ~~g~~l~ 142 (293)
T 3thr_A 136 CLGNSFA 142 (293)
T ss_dssp ECTTCGG
T ss_pred EcChHHh
Confidence 98 7764
No 68
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.92 E-value=3.3e-09 Score=83.80 Aligned_cols=72 Identities=24% Similarity=0.192 Sum_probs=55.9
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++++ + . .+...+..... ...+||+|
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~--~-~--------~~~~~d~~~~~----~~~~fD~v 106 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL--G-R--------PVRTMLFHQLD----AIDAYDAV 106 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--T-S--------CCEECCGGGCC----CCSCEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc--C-C--------ceEEeeeccCC----CCCcEEEE
Confidence 36789999999999999999999999999999 99999999987 1 1 11223322211 35689999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..+++.
T Consensus 107 ~~~~~l~~ 114 (211)
T 3e23_A 107 WAHACLLH 114 (211)
T ss_dssp EECSCGGG
T ss_pred EecCchhh
Confidence 99998864
No 69
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.92 E-value=1.5e-09 Score=85.94 Aligned_cols=79 Identities=20% Similarity=0.042 Sum_probs=57.6
Q ss_pred CCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCC-CcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPL-PDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~-fD~ 198 (210)
++.+|||+|||+|.+++.++..++ +|+++|+ +.+++.+++|+..++.. ..++.+...+..+... .+.+.+ ||+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~---~~~v~~~~~d~~~~~~-~~~~~~~fD~ 128 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCS---SEQAEVINQSSLDFLK-QPQNQPHFDV 128 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCC---TTTEEEECSCHHHHTT-SCCSSCCEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCC---ccceEEEECCHHHHHH-hhccCCCCCE
Confidence 678999999999999998777775 8999999 99999999999988752 0135555444322111 112357 999
Q ss_pred EEEcce
Q 028335 199 GNESLL 204 (210)
Q Consensus 199 Iia~Dv 204 (210)
|++...
T Consensus 129 I~~~~~ 134 (201)
T 2ift_A 129 VFLDPP 134 (201)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 997655
No 70
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.92 E-value=2.8e-09 Score=86.64 Aligned_cols=78 Identities=18% Similarity=0.101 Sum_probs=62.1
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|..+..+++.+.+|+++|. +.+++.+++++ .+.. .++.+...++.+. .+.+.+||+|
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~-----~~~~~~~~d~~~~---~~~~~~fD~v 108 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-AGVD-----RKVQVVQADARAI---PLPDESVHGV 108 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-TTSC-----TTEEEEESCTTSC---CSCTTCEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hccC-----CceEEEEcccccC---CCCCCCeeEE
Confidence 46789999999999999999988999999999 99999999987 2221 3567777666432 2345689999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 109 ~~~~~l~~ 116 (263)
T 2yqz_A 109 IVVHLWHL 116 (263)
T ss_dssp EEESCGGG
T ss_pred EECCchhh
Confidence 99988764
No 71
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.92 E-value=8e-10 Score=85.06 Aligned_cols=78 Identities=14% Similarity=0.129 Sum_probs=58.6
Q ss_pred cCCCEEEEECCccCHHHHHHHHcC-CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g-~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.++++|||+|||+|.+++.+++.+ .+|+++|+ +.+++.+++|+..+++. .++.+...++.+.. .....+||+
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~--~~~~~~fD~ 103 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAE----NRFTLLKMEAERAI--DCLTGRFDL 103 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCG----GGEEEECSCHHHHH--HHBCSCEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCC----CceEEEECcHHHhH--HhhcCCCCE
Confidence 477899999999999999999886 48999999 99999999999988653 34555554432211 112356999
Q ss_pred EEEcce
Q 028335 199 GNESLL 204 (210)
Q Consensus 199 Iia~Dv 204 (210)
|++...
T Consensus 104 i~~~~~ 109 (177)
T 2esr_A 104 VFLDPP 109 (177)
T ss_dssp EEECCS
T ss_pred EEECCC
Confidence 997543
No 72
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.92 E-value=1.2e-09 Score=90.31 Aligned_cols=82 Identities=15% Similarity=0.084 Sum_probs=61.4
Q ss_pred HHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCC
Q 028335 106 LGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWG 184 (210)
Q Consensus 106 la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~ 184 (210)
+.++|.... -.+.+|||||||+|..+..++..+.+|+++|+ +.|++.++++ .++.+...+..
T Consensus 29 l~~~l~~~~------~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~-----------~~v~~~~~~~e 91 (257)
T 4hg2_A 29 LFRWLGEVA------PARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRH-----------PRVTYAVAPAE 91 (257)
T ss_dssp HHHHHHHHS------SCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCC-----------TTEEEEECCTT
T ss_pred HHHHHHHhc------CCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhc-----------CCceeehhhhh
Confidence 456666542 24578999999999999999999999999999 8888765431 24666665543
Q ss_pred CCCCCCccCCCCcEEEEcceeee
Q 028335 185 DDPDQDLIQPLPDYGNESLLLFL 207 (210)
Q Consensus 185 ~~~~~~~~~~~fD~Iia~DviY~ 207 (210)
+ ..+.+.+||+|+++.+++.
T Consensus 92 ~---~~~~~~sfD~v~~~~~~h~ 111 (257)
T 4hg2_A 92 D---TGLPPASVDVAIAAQAMHW 111 (257)
T ss_dssp C---CCCCSSCEEEEEECSCCTT
T ss_pred h---hcccCCcccEEEEeeehhH
Confidence 3 3345679999999998864
No 73
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.92 E-value=4.3e-09 Score=84.21 Aligned_cols=79 Identities=18% Similarity=0.150 Sum_probs=59.2
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCC---CccC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ---DLIQ 193 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~---~~~~ 193 (210)
.++++|||||||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.. +++.+...+..+.... ....
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~l~~~~~~~~~ 132 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQ----DKVTILNGASQDLIPQLKKKYDV 132 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG----GGEEEEESCHHHHGGGTTTTSCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCC----CceEEEECCHHHHHHHHHHhcCC
Confidence 36789999999999999999974 679999999 99999999999998765 4566666553221111 0112
Q ss_pred CCCcEEEEcc
Q 028335 194 PLPDYGNESL 203 (210)
Q Consensus 194 ~~fD~Iia~D 203 (210)
.+||+|+..-
T Consensus 133 ~~fD~V~~d~ 142 (221)
T 3u81_A 133 DTLDMVFLDH 142 (221)
T ss_dssp CCCSEEEECS
T ss_pred CceEEEEEcC
Confidence 5899998643
No 74
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.91 E-value=4.4e-09 Score=82.66 Aligned_cols=78 Identities=12% Similarity=0.015 Sum_probs=59.1
Q ss_pred cCCCEEEEECCccCHHH-HHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVG-CIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~-l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.++.+|||+|||+|..+ ..++..+.+|+++|. +.+++.+++++..++. ++.+...+..+. .+.+.+||+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~---~~~~~~fD~ 92 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNF------KLNISKGDIRKL---PFKDESMSF 92 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTC------CCCEEECCTTSC---CSCTTCEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC------ceEEEECchhhC---CCCCCceeE
Confidence 36789999999999874 445667889999999 9999999999887653 245555554332 234568999
Q ss_pred EEEcceeee
Q 028335 199 GNESLLLFL 207 (210)
Q Consensus 199 Iia~DviY~ 207 (210)
|++.+++++
T Consensus 93 v~~~~~l~~ 101 (209)
T 2p8j_A 93 VYSYGTIFH 101 (209)
T ss_dssp EEECSCGGG
T ss_pred EEEcChHHh
Confidence 999988764
No 75
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.91 E-value=9.8e-09 Score=88.08 Aligned_cols=79 Identities=15% Similarity=0.170 Sum_probs=63.1
Q ss_pred ccCCCEEEEECCccCHHHHHHHHcCC-EEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALLGA-QVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
..++++|||+|||+|.+++.+++.++ +|+++|...+++.+++++..|+.. .++.+...++.+.. ...+||+
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l~----~~v~~~~~d~~~~~----~~~~~D~ 119 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLT----DRIVVIPGKVEEVS----LPEQVDI 119 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCT----TTEEEEESCTTTCC----CSSCEEE
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcchhhCC----CCCceeE
Confidence 35788999999999999999999876 899999944889999999998764 45777777665431 1257999
Q ss_pred EEEcceee
Q 028335 199 GNESLLLF 206 (210)
Q Consensus 199 Iia~DviY 206 (210)
|++..+.|
T Consensus 120 Ivs~~~~~ 127 (348)
T 2y1w_A 120 IISEPMGY 127 (348)
T ss_dssp EEECCCBT
T ss_pred EEEeCchh
Confidence 99987755
No 76
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.91 E-value=5e-09 Score=82.43 Aligned_cols=73 Identities=21% Similarity=0.272 Sum_probs=59.5
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
++.+|||+|||+|.+++.+++. +.+|+++|. +.+++.+++|+..++.. ++.+...++.+.. ...+||+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~----~~~~~D~ 135 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-----NIEPVQSRVEEFP----SEPPFDG 135 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-----SEEEEECCTTTSC----CCSCEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CeEEEecchhhCC----ccCCcCE
Confidence 5789999999999999999976 569999999 99999999999988754 3677777765432 2357999
Q ss_pred EEEcc
Q 028335 199 GNESL 203 (210)
Q Consensus 199 Iia~D 203 (210)
|++..
T Consensus 136 i~~~~ 140 (207)
T 1jsx_A 136 VISRA 140 (207)
T ss_dssp EECSC
T ss_pred EEEec
Confidence 99753
No 77
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.90 E-value=3.2e-09 Score=86.24 Aligned_cols=76 Identities=24% Similarity=0.206 Sum_probs=60.7
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.++++|||+|||+|..+..+++.+. +|+++|+ +.+++.+++++. . .++.+...+..+. .+.+.+||+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~----~~~~~~~~d~~~~---~~~~~~fD~ 111 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----S----PVVCYEQKAIEDI---AIEPDAYNV 111 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----C----TTEEEEECCGGGC---CCCTTCEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----c----CCeEEEEcchhhC---CCCCCCeEE
Confidence 4788999999999999999999888 8999999 999999988865 1 3466666665332 234578999
Q ss_pred EEEcceeee
Q 028335 199 GNESLLLFL 207 (210)
Q Consensus 199 Iia~DviY~ 207 (210)
|++..+++.
T Consensus 112 v~~~~~l~~ 120 (253)
T 3g5l_A 112 VLSSLALHY 120 (253)
T ss_dssp EEEESCGGG
T ss_pred EEEchhhhh
Confidence 999998764
No 78
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.89 E-value=1.9e-09 Score=86.67 Aligned_cols=75 Identities=11% Similarity=-0.030 Sum_probs=60.2
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.++++.. ..++.+...+..+. .+...+||+|+
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~---~~~~~~fD~v~ 121 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGE--------GPDLSFIKGDLSSL---PFENEQFEAIM 121 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTC--------BTTEEEEECBTTBC---SSCTTCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhcc--------cCCceEEEcchhcC---CCCCCCccEEE
Confidence 6789999999999999999999999999999 899998888741 13466666665432 23457899999
Q ss_pred Ecceeee
Q 028335 201 ESLLLFL 207 (210)
Q Consensus 201 a~DviY~ 207 (210)
+..++++
T Consensus 122 ~~~~l~~ 128 (242)
T 3l8d_A 122 AINSLEW 128 (242)
T ss_dssp EESCTTS
T ss_pred EcChHhh
Confidence 9998864
No 79
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.89 E-value=4.4e-09 Score=82.99 Aligned_cols=74 Identities=15% Similarity=-0.072 Sum_probs=59.3
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++ ++. .++.+...+..+. ....+||+|
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~----~~~-----~~~~~~~~d~~~~----~~~~~~D~v 111 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR----HGL-----DNVEFRQQDLFDW----TPDRQWDAV 111 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG----GCC-----TTEEEEECCTTSC----CCSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh----cCC-----CCeEEEecccccC----CCCCceeEE
Confidence 36679999999999999999998999999999 899998887 332 2466666665433 346789999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 112 ~~~~~l~~ 119 (218)
T 3ou2_A 112 FFAHWLAH 119 (218)
T ss_dssp EEESCGGG
T ss_pred EEechhhc
Confidence 99998764
No 80
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.89 E-value=1.4e-08 Score=79.61 Aligned_cols=73 Identities=22% Similarity=0.182 Sum_probs=57.5
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++ +|||+|||+|..+..+++.+.+|+++|. +.+++.+++++..++. ++.+...+..+. .+...+||+|+
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~---~~~~~~fD~v~ 99 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGV------KITTVQSNLADF---DIVADAWEGIV 99 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTC------CEEEECCBTTTB---SCCTTTCSEEE
T ss_pred CC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCC------ceEEEEcChhhc---CCCcCCccEEE
Confidence 45 9999999999999999998999999999 9999999999887753 245555554332 23456899999
Q ss_pred Ecce
Q 028335 201 ESLL 204 (210)
Q Consensus 201 a~Dv 204 (210)
++.+
T Consensus 100 ~~~~ 103 (202)
T 2kw5_A 100 SIFC 103 (202)
T ss_dssp EECC
T ss_pred EEhh
Confidence 8643
No 81
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.89 E-value=3.2e-09 Score=83.02 Aligned_cols=77 Identities=16% Similarity=0.076 Sum_probs=59.0
Q ss_pred cCCCEEEEECCccCHHHHHHHHc-C--CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL-G--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~-g--~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
.++.+|||+|||+|..++.+++. + .+|+++|+ +.+++.+++|+..++.. .++.+...+..+... ..+.+|
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~--~~~~~f 94 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLI----DRVTLIKDGHQNMDK--YIDCPV 94 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCG----GGEEEECSCGGGGGG--TCCSCE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CCeEEEECCHHHHhh--hccCCc
Confidence 46789999999999999999876 2 58999999 99999999999988753 356666555432211 234689
Q ss_pred cEEEEcc
Q 028335 197 DYGNESL 203 (210)
Q Consensus 197 D~Iia~D 203 (210)
|+|++.-
T Consensus 95 D~v~~~~ 101 (197)
T 3eey_A 95 KAVMFNL 101 (197)
T ss_dssp EEEEEEE
T ss_pred eEEEEcC
Confidence 9999764
No 82
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.89 E-value=5e-09 Score=80.71 Aligned_cols=79 Identities=16% Similarity=0.004 Sum_probs=61.1
Q ss_pred ccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
..++.+|||+|||+|.+++.+++.+.+|+++|. +.+++.+++|+..++.. .++.+...++.+... ..++||+
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~~---~~~~~D~ 103 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLG----DNVTLMEGDAPEALC---KIPDIDI 103 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCC----TTEEEEESCHHHHHT---TSCCEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCC----cceEEEecCHHHhcc---cCCCCCE
Confidence 347789999999999999999988889999999 99999999999988753 346666555433111 1147999
Q ss_pred EEEccee
Q 028335 199 GNESLLL 205 (210)
Q Consensus 199 Iia~Dvi 205 (210)
|++..++
T Consensus 104 v~~~~~~ 110 (192)
T 1l3i_A 104 AVVGGSG 110 (192)
T ss_dssp EEESCCT
T ss_pred EEECCch
Confidence 9987653
No 83
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.88 E-value=4.7e-09 Score=90.81 Aligned_cols=91 Identities=15% Similarity=0.161 Sum_probs=63.5
Q ss_pred cCceEEEEeCCCCCCCCCcccEEEeccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HH
Q 028335 76 CGHSLSILQSPSSLGTPGVTGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PD 154 (210)
Q Consensus 76 ~g~~~~i~q~~~~~~~~g~tG~~~W~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~ 154 (210)
.|..+.+..++.+|..... ..+..+..++..... ..+.+|||||||+|.+++.+++.+.+|+++|+ +.
T Consensus 178 ~g~~~~~~~~~~~F~Q~n~------~~~~~l~~~~~~~~~-----~~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ 246 (369)
T 3bt7_A 178 AGKEMIYRQVENSFTQPNA------AMNIQMLEWALDVTK-----GSKGDLLELYCGNGNFSLALARNFDRVLATEIAKP 246 (369)
T ss_dssp TTBCCEEEEETTSCCCSBH------HHHHHHHHHHHHHTT-----TCCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHH
T ss_pred CCceEEEEECCCCeecCCH------HHHHHHHHHHHHHhh-----cCCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHH
Confidence 3544555555655543332 223445555544321 24678999999999999999987779999999 99
Q ss_pred HHHHHHHHHHHhccCCCCCCceEEEEee
Q 028335 155 RLRLLKKNIENNLRHGDLRGSAVVTELT 182 (210)
Q Consensus 155 ~l~~~~~N~~~n~~~~~~~~~~~~~~l~ 182 (210)
+++.+++|++.|++. ++.+...+
T Consensus 247 ai~~a~~n~~~ng~~-----~v~~~~~d 269 (369)
T 3bt7_A 247 SVAAAQYNIAANHID-----NVQIIRMA 269 (369)
T ss_dssp HHHHHHHHHHHTTCC-----SEEEECCC
T ss_pred HHHHHHHHHHHcCCC-----ceEEEECC
Confidence 999999999999864 35555443
No 84
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.88 E-value=5.2e-09 Score=86.59 Aligned_cols=80 Identities=13% Similarity=0.037 Sum_probs=63.1
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCc-cCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL-IQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~-~~~~fD 197 (210)
.++.+|||+|||+|..+..+++.+. +|+++|+ +.+++.+++++..++.. .++.+...+..+. .+ ...+||
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~---~~~~~~~fD 135 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRR----FKVFFRAQDSYGR---HMDLGKEFD 135 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCS----SEEEEEESCTTTS---CCCCSSCEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCC----ccEEEEECCcccc---ccCCCCCcC
Confidence 4778999999999999998888776 8999999 99999999998876543 3466666665433 22 356899
Q ss_pred EEEEcceeee
Q 028335 198 YGNESLLLFL 207 (210)
Q Consensus 198 ~Iia~DviY~ 207 (210)
+|++..+++.
T Consensus 136 ~v~~~~~l~~ 145 (298)
T 1ri5_A 136 VISSQFSFHY 145 (298)
T ss_dssp EEEEESCGGG
T ss_pred EEEECchhhh
Confidence 9999988754
No 85
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.88 E-value=8.9e-09 Score=85.19 Aligned_cols=87 Identities=17% Similarity=0.190 Sum_probs=65.2
Q ss_pred cHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEE
Q 028335 102 SGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVV 178 (210)
Q Consensus 102 aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~ 178 (210)
.+..+..++..... .++.+|||+|||+|.+++.+++. +.+|+++|+ +.+++.+++|+..++.. ++.+
T Consensus 94 ~te~l~~~~l~~~~-----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-----~v~~ 163 (276)
T 2b3t_A 94 DTECLVEQALARLP-----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-----NIHI 163 (276)
T ss_dssp THHHHHHHHHHHSC-----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-----SEEE
T ss_pred hHHHHHHHHHHhcc-----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----ceEE
Confidence 34555555554321 35679999999999999999965 569999999 99999999999988753 4666
Q ss_pred EEeeCCCCCCCCccCCCCcEEEEc
Q 028335 179 TELTWGDDPDQDLIQPLPDYGNES 202 (210)
Q Consensus 179 ~~l~w~~~~~~~~~~~~fD~Iia~ 202 (210)
...++.+. +...+||+|++.
T Consensus 164 ~~~d~~~~----~~~~~fD~Iv~n 183 (276)
T 2b3t_A 164 LQSDWFSA----LAGQQFAMIVSN 183 (276)
T ss_dssp ECCSTTGG----GTTCCEEEEEEC
T ss_pred EEcchhhh----cccCCccEEEEC
Confidence 66665432 224689999986
No 86
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.88 E-value=5.5e-09 Score=85.35 Aligned_cols=77 Identities=14% Similarity=0.036 Sum_probs=58.2
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
.++++|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.. .++.+...+..+.........+|
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~----~~v~~~~~d~~~~l~~~~~~~~f 137 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVD----QRVTLREGPALQSLESLGECPAF 137 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCT----TTEEEEESCHHHHHHTCCSCCCC
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHHhcCCCCCe
Confidence 37889999999999999999986 679999999 99999999999988765 45666665532211111112479
Q ss_pred cEEEE
Q 028335 197 DYGNE 201 (210)
Q Consensus 197 D~Iia 201 (210)
|+|++
T Consensus 138 D~V~~ 142 (248)
T 3tfw_A 138 DLIFI 142 (248)
T ss_dssp SEEEE
T ss_pred EEEEE
Confidence 99885
No 87
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.88 E-value=7.9e-09 Score=82.73 Aligned_cols=77 Identities=13% Similarity=0.006 Sum_probs=60.5
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++|+..++ ++.+...+..... ....+||+|
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~-------~v~~~~~d~~~~~---~~~~~fD~v 138 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYN-------NIKLILGDGTLGY---EEEKPYDRV 138 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCS-------SEEEEESCGGGCC---GGGCCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcC-------CeEEEECCccccc---ccCCCccEE
Confidence 46789999999999999999998889999999 999999999986654 3555555543311 124689999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 139 ~~~~~~~~ 146 (231)
T 1vbf_A 139 VVWATAPT 146 (231)
T ss_dssp EESSBBSS
T ss_pred EECCcHHH
Confidence 99988753
No 88
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.88 E-value=6.2e-09 Score=84.09 Aligned_cols=76 Identities=14% Similarity=0.058 Sum_probs=58.7
Q ss_pred cCCCEEEEECCccCHHHHHHHH--cCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAAL--LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~--~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
.++++|||+|||+|..++.+++ .+.+|+++|+ +.+++.+++|+..+++. .++.+...+..+.... ....+||
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~-~~~~~fD 144 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFE----NQVRIIEGNALEQFEN-VNDKVYD 144 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCT----TTEEEEESCGGGCHHH-HTTSCEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEECCHHHHHHh-hccCCcc
Confidence 3778999999999999999998 3669999999 99999999999988764 4567666654332110 1146899
Q ss_pred EEEE
Q 028335 198 YGNE 201 (210)
Q Consensus 198 ~Iia 201 (210)
+|++
T Consensus 145 ~V~~ 148 (232)
T 3ntv_A 145 MIFI 148 (232)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9985
No 89
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.87 E-value=1.6e-08 Score=81.13 Aligned_cols=70 Identities=19% Similarity=0.092 Sum_probs=56.0
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCcc-CCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLI-QPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~-~~~fD~ 198 (210)
.++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.+++| . .++.+...++.+... +. +.+||+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~-----~~~~~~~~d~~~~~~--~~~~~~fD~ 114 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN-----A-----PHADVYEWNGKGELP--AGLGAPFGL 114 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH-----C-----TTSEEEECCSCSSCC--TTCCCCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh-----C-----CCceEEEcchhhccC--CcCCCCEEE
Confidence 36789999999999999999999999999999 9999999988 1 246667777643222 23 568999
Q ss_pred EEEc
Q 028335 199 GNES 202 (210)
Q Consensus 199 Iia~ 202 (210)
|++.
T Consensus 115 v~~~ 118 (226)
T 3m33_A 115 IVSR 118 (226)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 9986
No 90
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.87 E-value=1.5e-08 Score=80.16 Aligned_cols=78 Identities=15% Similarity=0.097 Sum_probs=60.7
Q ss_pred cCCCEEEEECCccCHHHHHHHHcC---CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLG---AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g---~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
.++.+|||+|||+|.++..+++.+ .+|+++|. +.+++.+++|+..++.. ++.+...+..... ....+|
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~---~~~~~f 147 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-----NVIVIVGDGTLGY---EPLAPY 147 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-----TEEEEESCGGGCC---GGGCCE
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CeEEEECCcccCC---CCCCCe
Confidence 467899999999999999999874 68999999 99999999999887653 3555555532211 124589
Q ss_pred cEEEEcceee
Q 028335 197 DYGNESLLLF 206 (210)
Q Consensus 197 D~Iia~DviY 206 (210)
|+|++..+++
T Consensus 148 D~v~~~~~~~ 157 (215)
T 2yxe_A 148 DRIYTTAAGP 157 (215)
T ss_dssp EEEEESSBBS
T ss_pred eEEEECCchH
Confidence 9999988765
No 91
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.87 E-value=6.7e-09 Score=83.89 Aligned_cols=78 Identities=14% Similarity=-0.061 Sum_probs=59.8
Q ss_pred CCCEEEEECCccCHHHHHHHHcC-CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g-~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
++.+|||+|||+|.++..+++.+ .+|+++|+ +.+++.+++++..++. .++.+...++... .....+||+|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~d~~~~---~~~~~~fD~v 150 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGK-----RVRNYFCCGLQDF---TPEPDSYDVI 150 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGG-----GEEEEEECCGGGC---CCCSSCEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCC-----ceEEEEEcChhhc---CCCCCCEEEE
Confidence 57899999999999999988774 48999999 9999999999876642 2355555554332 1234579999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 151 ~~~~~l~~ 158 (241)
T 2ex4_A 151 WIQWVIGH 158 (241)
T ss_dssp EEESCGGG
T ss_pred EEcchhhh
Confidence 99988764
No 92
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.87 E-value=2.2e-09 Score=86.21 Aligned_cols=74 Identities=11% Similarity=0.021 Sum_probs=58.7
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.+++++.. ++.+...+..+. ..+.+||+|
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~---------~v~~~~~d~~~~----~~~~~fD~v 107 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD---------GITYIHSRFEDA----QLPRRYDNI 107 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS---------CEEEEESCGGGC----CCSSCEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC---------CeEEEEccHHHc----CcCCcccEE
Confidence 47789999999999999999998889999999 8999999887532 245555554332 245689999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 108 ~~~~~l~~ 115 (250)
T 2p7i_A 108 VLTHVLEH 115 (250)
T ss_dssp EEESCGGG
T ss_pred EEhhHHHh
Confidence 99998864
No 93
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.87 E-value=4.9e-09 Score=87.02 Aligned_cols=73 Identities=16% Similarity=0.105 Sum_probs=58.0
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC--EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA--QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~--~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
.++.+|||+|||+|.+++.+++.+. +|+++|. +.+++.+++|++.|++. ++.+...+..+. .. ..+||
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-----~~~~~~~d~~~~-~~---~~~~D 188 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-----NVIPILADNRDV-EL---KDVAD 188 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-----SEEEEESCGGGC-CC---TTCEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CEEEEECChHHc-Cc---cCCce
Confidence 4678999999999999999998743 8999999 99999999999999864 355555554333 11 45799
Q ss_pred EEEEc
Q 028335 198 YGNES 202 (210)
Q Consensus 198 ~Iia~ 202 (210)
+|++.
T Consensus 189 ~Vi~d 193 (272)
T 3a27_A 189 RVIMG 193 (272)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 98864
No 94
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.86 E-value=1.5e-08 Score=90.79 Aligned_cols=79 Identities=15% Similarity=0.170 Sum_probs=63.4
Q ss_pred ccCCCEEEEECCccCHHHHHHHHcCC-EEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALLGA-QVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
..++++|||+|||+|.+++.+++.++ +|+++|+..+++.+++|+..|++. .++.+...++.+.. ...+||+
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl~----~~v~~~~~d~~~~~----~~~~fD~ 227 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLT----DRIVVIPGKVEEVS----LPEQVDI 227 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTCT----TTEEEEESCTTTCC----CSSCEEE
T ss_pred hcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCCC----CcEEEEECchhhCc----cCCCeEE
Confidence 34788999999999999999998865 899999933999999999999864 46888887775531 1247999
Q ss_pred EEEcceee
Q 028335 199 GNESLLLF 206 (210)
Q Consensus 199 Iia~DviY 206 (210)
|++.-++|
T Consensus 228 Ivs~~~~~ 235 (480)
T 3b3j_A 228 IISEPMGY 235 (480)
T ss_dssp EECCCCHH
T ss_pred EEEeCchH
Confidence 99976655
No 95
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.86 E-value=1.5e-09 Score=82.47 Aligned_cols=77 Identities=22% Similarity=0.161 Sum_probs=57.0
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCC-ccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD-LIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~-~~~~~fD~I 199 (210)
++++|||+|||+|.+++.+++.+.+|+++|+ +.+++.+++|+..++. ++.+...++.+..... -...+||+|
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~~D~i 114 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGL------GARVVALPVEVFLPEAKAQGERFTVA 114 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTC------CCEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCC------ceEEEeccHHHHHHhhhccCCceEEE
Confidence 6789999999999999999999989999999 9999999999988864 2444443332211000 012379999
Q ss_pred EEcce
Q 028335 200 NESLL 204 (210)
Q Consensus 200 ia~Dv 204 (210)
++...
T Consensus 115 ~~~~~ 119 (171)
T 1ws6_A 115 FMAPP 119 (171)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 98654
No 96
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.86 E-value=1.5e-08 Score=79.79 Aligned_cols=72 Identities=24% Similarity=0.255 Sum_probs=56.7
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.++.+|||+|||+|.+++.+++.+. +|+++|+ +.+++.+++|+..++. ++.+...+..+. ..+||+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~d~~~~------~~~~D~ 115 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG------KFKVFIGDVSEF------NSRVDI 115 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT------SEEEEESCGGGC------CCCCSE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC------CEEEEECchHHc------CCCCCE
Confidence 4688999999999999999998876 7999999 9999999999987764 255555554332 237999
Q ss_pred EEEcce
Q 028335 199 GNESLL 204 (210)
Q Consensus 199 Iia~Dv 204 (210)
|++.-.
T Consensus 116 v~~~~p 121 (207)
T 1wy7_A 116 VIMNPP 121 (207)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 987543
No 97
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.86 E-value=4.2e-09 Score=86.46 Aligned_cols=82 Identities=21% Similarity=0.135 Sum_probs=62.4
Q ss_pred cCCCEEEEECCccCHHHHHHHHc-C--CEEEEEeh-HH------HHHHHHHHHHHhccCCCCCCceEEEEee-CCCCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL-G--AQVILTDL-PD------RLRLLKKNIENNLRHGDLRGSAVVTELT-WGDDPDQ 189 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~-g--~~Vv~tD~-~~------~l~~~~~N~~~n~~~~~~~~~~~~~~l~-w~~~~~~ 189 (210)
.++.+|||+|||+|..+..+++. | .+|+++|+ +. +++.+++++..++.. .++.+...+ +.. ...
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~-~~~ 116 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG----DRLTVHFNTNLSD-DLG 116 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG----GGEEEECSCCTTT-CCG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC----CceEEEECChhhh-ccC
Confidence 47889999999999999999987 4 68999999 65 899999999877653 346665554 211 122
Q ss_pred CccCCCCcEEEEcceeee
Q 028335 190 DLIQPLPDYGNESLLLFL 207 (210)
Q Consensus 190 ~~~~~~fD~Iia~DviY~ 207 (210)
.+...+||+|++..++++
T Consensus 117 ~~~~~~fD~v~~~~~l~~ 134 (275)
T 3bkx_A 117 PIADQHFDRVVLAHSLWY 134 (275)
T ss_dssp GGTTCCCSEEEEESCGGG
T ss_pred CCCCCCEEEEEEccchhh
Confidence 234568999999999875
No 98
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.85 E-value=7.7e-09 Score=82.01 Aligned_cols=73 Identities=15% Similarity=0.086 Sum_probs=57.0
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++++. . ++.+...+..+. ... .+||+|+
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-~--------~~~~~~~d~~~~---~~~-~~fD~v~ 111 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP-K--------EFSITEGDFLSF---EVP-TSIDTIV 111 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC-T--------TCCEESCCSSSC---CCC-SCCSEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC-C--------ceEEEeCChhhc---CCC-CCeEEEE
Confidence 7789999999999999999999999999999 999999988865 1 233344443322 222 6899999
Q ss_pred Ecceeee
Q 028335 201 ESLLLFL 207 (210)
Q Consensus 201 a~DviY~ 207 (210)
+..+++.
T Consensus 112 ~~~~l~~ 118 (220)
T 3hnr_A 112 STYAFHH 118 (220)
T ss_dssp EESCGGG
T ss_pred ECcchhc
Confidence 9988764
No 99
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.85 E-value=4.1e-08 Score=86.61 Aligned_cols=70 Identities=23% Similarity=0.134 Sum_probs=57.4
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|.+++.+++.+.+|+++|+ +.+++.+++|+..|++. +.+...+..+.. ..+||+|
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~------v~~~~~d~~~~~-----~~~fD~V 357 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVD------AEFEVASDREVS-----VKGFDTV 357 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC------EEEEECCTTTCC-----CTTCSEE
T ss_pred CCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCc------EEEEECChHHcC-----ccCCCEE
Confidence 36789999999999999999998889999999 99999999999998752 556666554432 1279998
Q ss_pred EE
Q 028335 200 NE 201 (210)
Q Consensus 200 ia 201 (210)
++
T Consensus 358 v~ 359 (425)
T 2jjq_A 358 IV 359 (425)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 100
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.85 E-value=9.4e-09 Score=83.98 Aligned_cols=71 Identities=15% Similarity=0.026 Sum_probs=56.5
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++++. ++.+...+..+.. + ..+||+|+
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~----------~~~~~~~d~~~~~---~-~~~fD~v~ 115 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNP----------DAVLHHGDMRDFS---L-GRRFSAVT 115 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCT----------TSEEEECCTTTCC---C-SCCEEEEE
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC----------CCEEEECChHHCC---c-cCCcCEEE
Confidence 5689999999999999999999999999999 999999988743 2455555544321 1 56899999
Q ss_pred Ecc-eee
Q 028335 201 ESL-LLF 206 (210)
Q Consensus 201 a~D-viY 206 (210)
+.. ++.
T Consensus 116 ~~~~~l~ 122 (263)
T 3pfg_A 116 CMFSSIG 122 (263)
T ss_dssp ECTTGGG
T ss_pred EcCchhh
Confidence 986 664
No 101
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.85 E-value=5.9e-09 Score=83.54 Aligned_cols=76 Identities=21% Similarity=0.270 Sum_probs=59.9
Q ss_pred cCCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
.++.+|||+|||+|..+..+++. +.+|+++|+ +.+++.+++++..++ ++.+...+..+.. .. .+||
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~d~~~~~---~~-~~fD 111 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-------KVKYIEADYSKYD---FE-EKYD 111 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-------TEEEEESCTTTCC---CC-SCEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-------CEEEEeCchhccC---CC-CCce
Confidence 46789999999999999999987 679999999 999999998865432 4666666654322 12 6899
Q ss_pred EEEEcceeee
Q 028335 198 YGNESLLLFL 207 (210)
Q Consensus 198 ~Iia~DviY~ 207 (210)
+|++..+++.
T Consensus 112 ~v~~~~~l~~ 121 (234)
T 3dtn_A 112 MVVSALSIHH 121 (234)
T ss_dssp EEEEESCGGG
T ss_pred EEEEeCcccc
Confidence 9999988764
No 102
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.85 E-value=7.8e-09 Score=85.02 Aligned_cols=95 Identities=15% Similarity=-0.065 Sum_probs=62.5
Q ss_pred HHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHH----------hccCC--
Q 028335 104 VVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIEN----------NLRHG-- 170 (210)
Q Consensus 104 ~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~----------n~~~~-- 170 (210)
..+.+|+..... ..++.+|||+|||+|..+..+++.|.+|+++|+ +.+++.++++... ++...
T Consensus 54 ~~l~~~~~~~~~----~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~ 129 (252)
T 2gb4_A 54 QLLKKHLDTFLK----GQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFK 129 (252)
T ss_dssp HHHHHHHHHHHT----TCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEE
T ss_pred HHHHHHHHHhcc----CCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccc
Confidence 345666654211 136789999999999999999999999999999 9999998765431 00000
Q ss_pred CCCCceEEEEeeCCCCCCCCccC-CCCcEEEEccee
Q 028335 171 DLRGSAVVTELTWGDDPDQDLIQ-PLPDYGNESLLL 205 (210)
Q Consensus 171 ~~~~~~~~~~l~w~~~~~~~~~~-~~fD~Iia~Dvi 205 (210)
....++.+...+..+ ..... .+||+|++..++
T Consensus 130 ~~~~~i~~~~~D~~~---l~~~~~~~FD~V~~~~~l 162 (252)
T 2gb4_A 130 SSSGSISLYCCSIFD---LPRANIGKFDRIWDRGAL 162 (252)
T ss_dssp ETTSSEEEEESCTTT---GGGGCCCCEEEEEESSST
T ss_pred cCCCceEEEECcccc---CCcccCCCEEEEEEhhhh
Confidence 001346666655432 22222 689999976654
No 103
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.84 E-value=6.4e-09 Score=81.55 Aligned_cols=73 Identities=19% Similarity=0.006 Sum_probs=56.8
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
.+.+|||+|||+|.++..+++.+.+|+++|+ +.+++.++++. .++.+...++.+ ..+...+||+|+
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~---~~~~~~~fD~v~ 107 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTH----------PSVTFHHGTITD---LSDSPKRWAGLL 107 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHC----------TTSEEECCCGGG---GGGSCCCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC----------CCCeEEeCcccc---cccCCCCeEEEE
Confidence 3789999999999999999999999999999 99999998872 124444444322 223457899999
Q ss_pred Ecceeee
Q 028335 201 ESLLLFL 207 (210)
Q Consensus 201 a~DviY~ 207 (210)
+..+++.
T Consensus 108 ~~~~l~~ 114 (203)
T 3h2b_A 108 AWYSLIH 114 (203)
T ss_dssp EESSSTT
T ss_pred ehhhHhc
Confidence 9988764
No 104
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.84 E-value=1.4e-08 Score=84.28 Aligned_cols=78 Identities=18% Similarity=0.114 Sum_probs=61.8
Q ss_pred ccCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPL 195 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~ 195 (210)
..++.+|||+|||+|..++.+++. +.+|+++|+ +.+++.+++++..++. ++.+...+..+.. + ..+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~------~v~~~~~d~~~~~---~-~~~ 89 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY------DSEFLEGDATEIE---L-NDK 89 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS------EEEEEESCTTTCC---C-SSC
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC------ceEEEEcchhhcC---c-CCC
Confidence 347789999999999999999986 579999999 9999999999876542 4666666654321 2 358
Q ss_pred CcEEEEcceeee
Q 028335 196 PDYGNESLLLFL 207 (210)
Q Consensus 196 fD~Iia~DviY~ 207 (210)
||+|++..+++.
T Consensus 90 fD~v~~~~~l~~ 101 (284)
T 3gu3_A 90 YDIAICHAFLLH 101 (284)
T ss_dssp EEEEEEESCGGG
T ss_pred eeEEEECChhhc
Confidence 999999988764
No 105
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.83 E-value=1.3e-08 Score=82.46 Aligned_cols=71 Identities=15% Similarity=0.110 Sum_probs=56.9
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||+|||+|..++.+++.+.+|+++|+ +.+++.+++|+..++. ++.+...++.+.. ...+||+|+
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~------~v~~~~~d~~~~~----~~~~fD~v~ 110 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNL------KIEFLQGDVLEIA----FKNEFDAVT 110 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC------CCEEEESCGGGCC----CCSCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCC------ceEEEECChhhcc----cCCCccEEE
Confidence 5679999999999999999999999999999 9999999999987654 2555555543321 135799999
Q ss_pred Ec
Q 028335 201 ES 202 (210)
Q Consensus 201 a~ 202 (210)
+.
T Consensus 111 ~~ 112 (252)
T 1wzn_A 111 MF 112 (252)
T ss_dssp EC
T ss_pred Ec
Confidence 75
No 106
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.83 E-value=1.2e-08 Score=88.57 Aligned_cols=88 Identities=19% Similarity=0.189 Sum_probs=64.9
Q ss_pred ccCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCC---CCCCceEEEEeeCCCCCCC---
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHG---DLRGSAVVTELTWGDDPDQ--- 189 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~---~~~~~~~~~~l~w~~~~~~--- 189 (210)
..++.+|||||||+|..++.+++. +.+|+++|+ +.+++.+++|+..+.... ....++.+...++.+....
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 347889999999999999999875 459999999 999999999988762110 0013577777776543111
Q ss_pred CccCCCCcEEEEcceeee
Q 028335 190 DLIQPLPDYGNESLLLFL 207 (210)
Q Consensus 190 ~~~~~~fD~Iia~DviY~ 207 (210)
.+.+.+||+|++..+++.
T Consensus 161 ~~~~~~fD~V~~~~~l~~ 178 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNL 178 (383)
T ss_dssp CCCTTCEEEEEEESCGGG
T ss_pred CCCCCCEEEEEEccchhc
Confidence 345578999999988765
No 107
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.82 E-value=7.3e-09 Score=83.11 Aligned_cols=76 Identities=11% Similarity=-0.059 Sum_probs=59.5
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++++..++. ++.+...+..+. .+. .+||+|+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~---~~~-~~fD~v~ 106 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL------KPRLACQDISNL---NIN-RKFDLIT 106 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC------CCEEECCCGGGC---CCS-CCEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCC------CeEEEecccccC---Ccc-CCceEEE
Confidence 6789999999999999999999999999999 9999999999877653 244444443322 122 6799999
Q ss_pred Ecc-eeee
Q 028335 201 ESL-LLFL 207 (210)
Q Consensus 201 a~D-viY~ 207 (210)
+.. ++..
T Consensus 107 ~~~~~l~~ 114 (246)
T 1y8c_A 107 CCLDSTNY 114 (246)
T ss_dssp ECTTGGGG
T ss_pred EcCccccc
Confidence 986 7653
No 108
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.82 E-value=4.1e-09 Score=86.42 Aligned_cols=85 Identities=14% Similarity=-0.018 Sum_probs=61.7
Q ss_pred HHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeC
Q 028335 105 VLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTW 183 (210)
Q Consensus 105 ~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w 183 (210)
.+.+++..... ..++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.++++. ++.+...++
T Consensus 21 ~~~~~l~~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-----------~~~~~~~d~ 85 (261)
T 3ege_A 21 RIVNAIINLLN----LPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP-----------QVEWFTGYA 85 (261)
T ss_dssp HHHHHHHHHHC----CCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT-----------TEEEECCCT
T ss_pred HHHHHHHHHhC----CCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc-----------CCEEEECch
Confidence 34555554332 247789999999999999999998899999999 88887665553 245555554
Q ss_pred CCCCCCCccCCCCcEEEEcceeee
Q 028335 184 GDDPDQDLIQPLPDYGNESLLLFL 207 (210)
Q Consensus 184 ~~~~~~~~~~~~fD~Iia~DviY~ 207 (210)
.+ ..+.+.+||+|++..++++
T Consensus 86 ~~---~~~~~~~fD~v~~~~~l~~ 106 (261)
T 3ege_A 86 EN---LALPDKSVDGVISILAIHH 106 (261)
T ss_dssp TS---CCSCTTCBSEEEEESCGGG
T ss_pred hh---CCCCCCCEeEEEEcchHhh
Confidence 33 2234578999999998754
No 109
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.82 E-value=1.3e-08 Score=82.17 Aligned_cols=78 Identities=17% Similarity=0.097 Sum_probs=59.8
Q ss_pred cCCCEEEEECCccCHHHHHHHHcC-CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g-~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.++.+|||+|||+|.++..+++.+ .+|+++|+ +.+++.+++|+..++.. ++.+...+..... ....+||+
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~---~~~~~fD~ 161 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-----NVHVILGDGSKGF---PPKAPYDV 161 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEESCGGGCC---GGGCCEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-----CcEEEECCcccCC---CCCCCccE
Confidence 467899999999999999999876 78999999 99999999999887754 3555555531111 12346999
Q ss_pred EEEcceee
Q 028335 199 GNESLLLF 206 (210)
Q Consensus 199 Iia~DviY 206 (210)
|++..++.
T Consensus 162 Ii~~~~~~ 169 (235)
T 1jg1_A 162 IIVTAGAP 169 (235)
T ss_dssp EEECSBBS
T ss_pred EEECCcHH
Confidence 99887653
No 110
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.82 E-value=6.3e-09 Score=82.96 Aligned_cols=77 Identities=18% Similarity=0.057 Sum_probs=57.3
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCc--cCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL--IQP 194 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~--~~~ 194 (210)
.++++|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.. +++.+...+..+...... ...
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~ 132 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLN----DRVEVRTGLALDSLQQIENEKYE 132 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCHHHHHHHHHHTTCC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHHHHHhcCCC
Confidence 37789999999999999999987 679999999 99999999999988764 346666655322110000 014
Q ss_pred CCcEEEE
Q 028335 195 LPDYGNE 201 (210)
Q Consensus 195 ~fD~Iia 201 (210)
+||+|+.
T Consensus 133 ~fD~v~~ 139 (223)
T 3duw_A 133 PFDFIFI 139 (223)
T ss_dssp CCSEEEE
T ss_pred CcCEEEE
Confidence 6998885
No 111
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.82 E-value=2.7e-09 Score=81.38 Aligned_cols=71 Identities=14% Similarity=0.080 Sum_probs=55.9
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.++++ . .++.+...+ ..+...+||+|
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~-----~~v~~~~~d------~~~~~~~~D~v 79 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK-----F-----DSVITLSDP------KEIPDNSVDFI 79 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH-----C-----TTSEEESSG------GGSCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh-----C-----CCcEEEeCC------CCCCCCceEEE
Confidence 36779999999999999999988779999999 8999999888 1 134444333 22345689999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..+++.
T Consensus 80 ~~~~~l~~ 87 (170)
T 3i9f_A 80 LFANSFHD 87 (170)
T ss_dssp EEESCSTT
T ss_pred EEccchhc
Confidence 99998874
No 112
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.81 E-value=1.9e-08 Score=81.78 Aligned_cols=73 Identities=19% Similarity=0.115 Sum_probs=59.3
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
.++.+|||+|||+|.+++.+++. +.+|+++|. +.+++.+++|++.++.. +++.+...++.+. +...+|
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~----~~~~~~ 163 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFD----DRVTIKLKDIYEG----IEEENV 163 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCT----TTEEEECSCGGGC----CCCCSE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCC----CceEEEECchhhc----cCCCCc
Confidence 47889999999999999999987 569999999 99999999999988764 3466666665432 334579
Q ss_pred cEEEE
Q 028335 197 DYGNE 201 (210)
Q Consensus 197 D~Iia 201 (210)
|+|++
T Consensus 164 D~v~~ 168 (255)
T 3mb5_A 164 DHVIL 168 (255)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 99987
No 113
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.81 E-value=3.8e-09 Score=84.88 Aligned_cols=76 Identities=26% Similarity=0.221 Sum_probs=59.0
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.++.+|||+|||+|..+..+++.+. +|+++|+ +.+++.++++...+ ++.+...+.... .+...+||+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~d~~~~---~~~~~~fD~ 110 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDT--------GITYERADLDKL---HLPQDSFDL 110 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSS--------SEEEEECCGGGC---CCCTTCEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccC--------CceEEEcChhhc---cCCCCCceE
Confidence 3678999999999999999999888 9999999 89999998875432 355555554332 234568999
Q ss_pred EEEcceeee
Q 028335 199 GNESLLLFL 207 (210)
Q Consensus 199 Iia~DviY~ 207 (210)
|++..++++
T Consensus 111 v~~~~~l~~ 119 (243)
T 3bkw_A 111 AYSSLALHY 119 (243)
T ss_dssp EEEESCGGG
T ss_pred EEEeccccc
Confidence 999998764
No 114
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.81 E-value=7.7e-09 Score=82.56 Aligned_cols=75 Identities=9% Similarity=-0.015 Sum_probs=56.3
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
++.+|||||||+|.+++.+++. +.+|+++|+ +.++..+++|+..+++. ++.+...+..+. ...+....||.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~-----nv~~~~~d~~~l-~~~~~~~~~d~ 111 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQ-----NVKLLNIDADTL-TDVFEPGEVKR 111 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCS-----SEEEECCCGGGH-HHHCCTTSCCE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCC-----CEEEEeCCHHHH-HhhcCcCCcCE
Confidence 5678999999999999999987 568999999 99999999999887753 455555554321 11123457888
Q ss_pred EEEc
Q 028335 199 GNES 202 (210)
Q Consensus 199 Iia~ 202 (210)
|+..
T Consensus 112 v~~~ 115 (213)
T 2fca_A 112 VYLN 115 (213)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8653
No 115
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.81 E-value=2.9e-09 Score=91.09 Aligned_cols=77 Identities=16% Similarity=-0.045 Sum_probs=57.1
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCC-ccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD-LIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~-~~~~~fD~I 199 (210)
++.+|||||||+|.+++.+++.|++|+++|+ +.+++.+++|+..|++.. .++.+...+..+..... ....+||+|
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~---~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQ---APIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTT---SCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCc---cceEEEECcHHHHHHHHHhcCCCceEE
Confidence 5679999999999999999999899999999 999999999999998641 12554444322111000 013579999
Q ss_pred EE
Q 028335 200 NE 201 (210)
Q Consensus 200 ia 201 (210)
++
T Consensus 230 i~ 231 (332)
T 2igt_A 230 LT 231 (332)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 116
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.80 E-value=1.6e-08 Score=85.57 Aligned_cols=78 Identities=13% Similarity=0.040 Sum_probs=61.4
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC---EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA---QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~---~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
.++.+|||+|||+|.+++.+++.+. +|+++|+ +.+++.+++|+..++.. ++.+...+..+... ...+|
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-----~v~~~~~d~~~~~~---~~~~f 145 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-----NVIFVCGDGYYGVP---EFSPY 145 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEESCGGGCCG---GGCCE
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CeEEEECChhhccc---cCCCe
Confidence 4788999999999999999998754 5999999 99999999999988764 36666666533211 24689
Q ss_pred cEEEEcceee
Q 028335 197 DYGNESLLLF 206 (210)
Q Consensus 197 D~Iia~DviY 206 (210)
|+|++..++.
T Consensus 146 D~Iv~~~~~~ 155 (317)
T 1dl5_A 146 DVIFVTVGVD 155 (317)
T ss_dssp EEEEECSBBS
T ss_pred EEEEEcCCHH
Confidence 9999987754
No 117
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.80 E-value=7.3e-09 Score=82.62 Aligned_cols=77 Identities=16% Similarity=0.077 Sum_probs=57.6
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCc---cC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL---IQ 193 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~---~~ 193 (210)
.++++|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.. +++.+...+..+...... ..
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~ 138 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLS----DKIGLRLSPAKDTLAELIHAGQA 138 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCHHHHHHHHHTTTCT
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCC----CceEEEeCCHHHHHHHhhhccCC
Confidence 36789999999999999999986 679999999 99999999999988765 446666655322111000 01
Q ss_pred CCCcEEEE
Q 028335 194 PLPDYGNE 201 (210)
Q Consensus 194 ~~fD~Iia 201 (210)
.+||+|+.
T Consensus 139 ~~fD~v~~ 146 (225)
T 3tr6_A 139 WQYDLIYI 146 (225)
T ss_dssp TCEEEEEE
T ss_pred CCccEEEE
Confidence 57999984
No 118
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.80 E-value=2e-08 Score=81.84 Aligned_cols=102 Identities=13% Similarity=0.061 Sum_probs=68.4
Q ss_pred ccEEEeccHH-HHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc-CC--EEEEEeh-HHHHHHHHHHHHHhccC
Q 028335 95 TGSVMWDSGV-VLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL-GA--QVILTDL-PDRLRLLKKNIENNLRH 169 (210)
Q Consensus 95 tG~~~W~aa~-~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~-g~--~Vv~tD~-~~~l~~~~~N~~~n~~~ 169 (210)
..++.|+.-. .||..|...++ ...+.+|.+|||||||+|..+..+|+. |. +|+++|. +.+++.+++++...
T Consensus 50 ~e~r~w~p~rsklaa~i~~gl~-~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--- 125 (233)
T 4df3_A 50 EEYREWNAYRSKLAAALLKGLI-ELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--- 125 (233)
T ss_dssp EEEEECCTTTCHHHHHHHTTCS-CCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---
T ss_pred ceeeeECCCchHHHHHHHhchh-hcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---
Confidence 4799999744 45555554322 123568999999999999999999976 43 7999999 99999998886543
Q ss_pred CCCCCceEEEEeeCCCCCCCCccCCCCcEEEEccee
Q 028335 170 GDLRGSAVVTELTWGDDPDQDLIQPLPDYGNESLLL 205 (210)
Q Consensus 170 ~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Iia~Dvi 205 (210)
.++.....+-............+|+|++ |+-
T Consensus 126 ----~ni~~V~~d~~~p~~~~~~~~~vDvVf~-d~~ 156 (233)
T 4df3_A 126 ----RNIFPILGDARFPEKYRHLVEGVDGLYA-DVA 156 (233)
T ss_dssp ----TTEEEEESCTTCGGGGTTTCCCEEEEEE-CCC
T ss_pred ----cCeeEEEEeccCccccccccceEEEEEE-ecc
Confidence 2344444443333222233456787764 443
No 119
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.79 E-value=3.4e-09 Score=87.16 Aligned_cols=47 Identities=23% Similarity=0.372 Sum_probs=40.9
Q ss_pred ccCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHh
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENN 166 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n 166 (210)
..++++|||||||+|+.++.++..++ +|+++|+ +.+++.+++++..+
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~ 101 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKE 101 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTC
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcC
Confidence 35778999999999998888888886 6999999 99999999987654
No 120
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.79 E-value=1.7e-08 Score=79.30 Aligned_cols=85 Identities=18% Similarity=0.071 Sum_probs=62.9
Q ss_pred HHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEee
Q 028335 105 VLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELT 182 (210)
Q Consensus 105 ~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~ 182 (210)
.+..++... ..++.+|||+|||+|.+++.+++.+. +|+++|+ +.+++.+++++... .++.+...+
T Consensus 31 ~~~~~l~~~------~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~-------~~i~~~~~d 97 (215)
T 2pxx_A 31 SFRALLEPE------LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV-------PQLRWETMD 97 (215)
T ss_dssp HHHHHHGGG------CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC-------TTCEEEECC
T ss_pred HHHHHHHHh------cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC-------CCcEEEEcc
Confidence 355555543 24678999999999999999999887 8999999 99999999987531 245666665
Q ss_pred CCCCCCCCccCCCCcEEEEccee
Q 028335 183 WGDDPDQDLIQPLPDYGNESLLL 205 (210)
Q Consensus 183 w~~~~~~~~~~~~fD~Iia~Dvi 205 (210)
..+. .+.+.+||+|++..++
T Consensus 98 ~~~~---~~~~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 98 VRKL---DFPSASFDVVLEKGTL 117 (215)
T ss_dssp TTSC---CSCSSCEEEEEEESHH
T ss_pred hhcC---CCCCCcccEEEECcch
Confidence 4432 2345689999987654
No 121
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.79 E-value=2.6e-08 Score=81.47 Aligned_cols=73 Identities=10% Similarity=-0.068 Sum_probs=57.4
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
...+|||||||+|.+++.+. -+.+|+++|+ +.+++.++.|+..++.. ..+...+.-.. . ...+||+|+
T Consensus 105 ~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g~~------~~~~v~D~~~~---~-~~~~~DvvL 173 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKDWD------FTFALQDVLCA---P-PAEAGDLAL 173 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTTCE------EEEEECCTTTS---C-CCCBCSEEE
T ss_pred CCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcCCC------ceEEEeecccC---C-CCCCcchHH
Confidence 57799999999999999988 5568999999 99999999999988743 45555553222 1 345899999
Q ss_pred Eccee
Q 028335 201 ESLLL 205 (210)
Q Consensus 201 a~Dvi 205 (210)
+..++
T Consensus 174 llk~l 178 (253)
T 3frh_A 174 IFKLL 178 (253)
T ss_dssp EESCH
T ss_pred HHHHH
Confidence 98765
No 122
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.79 E-value=1.5e-08 Score=81.49 Aligned_cols=79 Identities=14% Similarity=0.009 Sum_probs=58.5
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
++.+|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.. .++.+...+..+.........+||+
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLE----SRIELLFGDALQLGEKLELYPLFDV 129 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCT----TTEEEECSCGGGSHHHHTTSCCEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEECCHHHHHHhcccCCCccE
Confidence 6789999999999999999987 579999999 99999999999988764 3455555443221110001457999
Q ss_pred EEEcce
Q 028335 199 GNESLL 204 (210)
Q Consensus 199 Iia~Dv 204 (210)
|++...
T Consensus 130 I~~~~~ 135 (233)
T 2gpy_A 130 LFIDAA 135 (233)
T ss_dssp EEEEGG
T ss_pred EEECCC
Confidence 987543
No 123
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.78 E-value=1.9e-08 Score=86.08 Aligned_cols=74 Identities=14% Similarity=0.135 Sum_probs=57.6
Q ss_pred CCCEEEEECCccCHHHHHHHHcC--CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g--~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.+.+|||||||+|.+++.+++.+ .+|+++|+ +.+++.+++|+..|+.. ..+...+. .+. ...+||+
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~------~~~~~~d~---~~~--~~~~fD~ 264 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE------GEVFASNV---FSE--VKGRFDM 264 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC------CEEEECST---TTT--CCSCEEE
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC------CEEEEccc---ccc--ccCCeeE
Confidence 46689999999999999999876 48999999 89999999999988754 23333332 221 2568999
Q ss_pred EEEcceee
Q 028335 199 GNESLLLF 206 (210)
Q Consensus 199 Iia~DviY 206 (210)
|++..+++
T Consensus 265 Iv~~~~~~ 272 (343)
T 2pjd_A 265 IISNPPFH 272 (343)
T ss_dssp EEECCCCC
T ss_pred EEECCCcc
Confidence 99987654
No 124
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.78 E-value=5.7e-09 Score=82.61 Aligned_cols=75 Identities=13% Similarity=0.114 Sum_probs=54.8
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCC-CCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-QDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~-~~~~~~~fD~ 198 (210)
.++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.++++ . .+.+...+..+... ....+.+||+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~--------~~~~~~~~~~~~~~~~~~~~~~fD~ 119 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA---G--------AGEVHLASYAQLAEAKVPVGKDYDL 119 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT---C--------SSCEEECCHHHHHTTCSCCCCCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh---c--------ccccchhhHHhhcccccccCCCccE
Confidence 36789999999999999999998999999999 8999999887 1 12223333222111 1123446999
Q ss_pred EEEcceee
Q 028335 199 GNESLLLF 206 (210)
Q Consensus 199 Iia~DviY 206 (210)
|++..+++
T Consensus 120 v~~~~~l~ 127 (227)
T 3e8s_A 120 ICANFALL 127 (227)
T ss_dssp EEEESCCC
T ss_pred EEECchhh
Confidence 99999887
No 125
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.77 E-value=1.9e-08 Score=83.94 Aligned_cols=75 Identities=16% Similarity=0.097 Sum_probs=58.6
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||||||+|.++..+++.+.+|+++|+ +.+++.+++++..++... ..++.+...+..+.. ...+||+|+
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~--~~~v~~~~~d~~~~~----~~~~fD~v~ 155 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADV--RDRCTLVQGDMSAFA----LDKRFGTVV 155 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHH--HTTEEEEECBTTBCC----CSCCEEEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhccccc--ccceEEEeCchhcCC----cCCCcCEEE
Confidence 4559999999999999999999999999999 999999999988765210 024677777765432 156899998
Q ss_pred Ec
Q 028335 201 ES 202 (210)
Q Consensus 201 a~ 202 (210)
++
T Consensus 156 ~~ 157 (299)
T 3g2m_A 156 IS 157 (299)
T ss_dssp EC
T ss_pred EC
Confidence 65
No 126
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.77 E-value=2.9e-09 Score=86.67 Aligned_cols=86 Identities=21% Similarity=0.241 Sum_probs=60.8
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCC------------------------CCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGD------------------------LRG 174 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~------------------------~~~ 174 (210)
.++++|||+|||+|.+++.+++.+. +|+++|+ +.+++.+++++..+..... ...
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 5678999999999999999998887 8999999 9999999998765421000 001
Q ss_pred ce-EEEEeeCCCCCC-CCccCCCCcEEEEcceee
Q 028335 175 SA-VVTELTWGDDPD-QDLIQPLPDYGNESLLLF 206 (210)
Q Consensus 175 ~~-~~~~l~w~~~~~-~~~~~~~fD~Iia~DviY 206 (210)
++ .+...+..+... ......+||+|++..+++
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~ 168 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLD 168 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHH
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhh
Confidence 14 566666544321 111226899999999876
No 127
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.77 E-value=3.3e-08 Score=79.28 Aligned_cols=74 Identities=20% Similarity=0.118 Sum_probs=57.3
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||+|||+|.++..+++. .+|+++|+ +.+++.+++++..++. ++.+...+..+.. . ..+||+|+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~d~~~~~---~-~~~fD~v~ 101 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETNR------HVDFWVQDMRELE---L-PEPVDAIT 101 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTTC------CCEEEECCGGGCC---C-SSCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcCC------ceEEEEcChhhcC---C-CCCcCEEE
Confidence 5689999999999999999987 89999999 9999999999887652 3555555543321 1 25799999
Q ss_pred Ec-ceee
Q 028335 201 ES-LLLF 206 (210)
Q Consensus 201 a~-DviY 206 (210)
+. |++.
T Consensus 102 ~~~~~~~ 108 (243)
T 3d2l_A 102 ILCDSLN 108 (243)
T ss_dssp ECTTGGG
T ss_pred EeCCchh
Confidence 86 3554
No 128
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.77 E-value=4.4e-09 Score=84.86 Aligned_cols=73 Identities=12% Similarity=0.099 Sum_probs=55.8
Q ss_pred CCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
++.+|||+|||+|..+..+++.+. +|+++|+ +.+++.+++++..++ .++.+...++.+.. ..+.+.+||+|
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~------~~v~~~~~d~~~~~-~~~~~~~fD~V 132 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT------HKVIPLKGLWEDVA-PTLPDGHFDGI 132 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS------SEEEEEESCHHHHG-GGSCTTCEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC------CCeEEEecCHHHhh-cccCCCceEEE
Confidence 677999999999999999988665 7999999 999999999876654 23555555543321 12345689999
Q ss_pred EE
Q 028335 200 NE 201 (210)
Q Consensus 200 ia 201 (210)
++
T Consensus 133 ~~ 134 (236)
T 1zx0_A 133 LY 134 (236)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 129
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.76 E-value=3.3e-09 Score=92.41 Aligned_cols=77 Identities=19% Similarity=-0.002 Sum_probs=58.1
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCC-ceEEEEeeCCCCCCCCc-cCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRG-SAVVTELTWGDDPDQDL-IQPLP 196 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~-~~~~~~l~w~~~~~~~~-~~~~f 196 (210)
.++++|||+|||+|.+++.+++.|+ +|+++|+ +.+++.+++|++.|++. . ++.+...+..+...... ...+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~----~~~v~~~~~D~~~~l~~~~~~~~~f 286 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLD----MANHQLVVMDVFDYFKYARRHHLTY 286 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCC----CTTEEEEESCHHHHHHHHHHTTCCE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECCHHHHHHHHHHhCCCc
Confidence 3678999999999999999999876 8999999 99999999999999864 2 46666555322111000 12478
Q ss_pred cEEEE
Q 028335 197 DYGNE 201 (210)
Q Consensus 197 D~Iia 201 (210)
|+|++
T Consensus 287 D~Ii~ 291 (385)
T 2b78_A 287 DIIII 291 (385)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 98886
No 130
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.76 E-value=1.5e-08 Score=86.68 Aligned_cols=69 Identities=17% Similarity=0.131 Sum_probs=56.5
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||+|||+|.+++. ++.+.+|+++|. +.+++.+++|++.|++. .++.+...+..+.. .+||+|+
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~----~~v~~~~~D~~~~~------~~fD~Vi 263 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLE----HKIIPILSDVREVD------VKGNRVI 263 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCT----TTEEEEESCGGGCC------CCEEEEE
T ss_pred CCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEECChHHhc------CCCcEEE
Confidence 788999999999999999 885568999999 99999999999999874 35666665543321 5789888
Q ss_pred E
Q 028335 201 E 201 (210)
Q Consensus 201 a 201 (210)
+
T Consensus 264 ~ 264 (336)
T 2yx1_A 264 M 264 (336)
T ss_dssp E
T ss_pred E
Confidence 6
No 131
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.76 E-value=7e-09 Score=91.02 Aligned_cols=74 Identities=18% Similarity=0.113 Sum_probs=57.2
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHh--ccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENN--LRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n--~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
++.+|||||||+|..++.+++.+.+|+++|+ +.+++.+++|++.+ +.. ++.+...+..+.... ..+.+||+
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~-----~i~~i~~Da~~~L~~-~~~~~fDv 166 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGK-----DVNILTGDFKEYLPL-IKTFHPDY 166 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTC-----EEEEEESCGGGSHHH-HHHHCCSE
T ss_pred CCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCC-----cEEEEECcHHHhhhh-ccCCCceE
Confidence 3889999999999999999999999999999 99999999999988 542 466666554332110 11247898
Q ss_pred EEE
Q 028335 199 GNE 201 (210)
Q Consensus 199 Iia 201 (210)
|++
T Consensus 167 V~l 169 (410)
T 3ll7_A 167 IYV 169 (410)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 132
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.76 E-value=2e-08 Score=81.43 Aligned_cols=73 Identities=11% Similarity=-0.086 Sum_probs=58.0
Q ss_pred cCCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
.++.+|||+|||+|..+..+++. +.+|+++|+ +.+++.++++ . .++.+...+..+.. .+.+||
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----~-----~~~~~~~~d~~~~~----~~~~fD 97 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----L-----PNTNFGKADLATWK----PAQKAD 97 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----S-----TTSEEEECCTTTCC----CSSCEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----C-----CCcEEEECChhhcC----ccCCcC
Confidence 36779999999999999999987 779999999 9999999887 1 23556666654332 356899
Q ss_pred EEEEcceeee
Q 028335 198 YGNESLLLFL 207 (210)
Q Consensus 198 ~Iia~DviY~ 207 (210)
+|++..++++
T Consensus 98 ~v~~~~~l~~ 107 (259)
T 2p35_A 98 LLYANAVFQW 107 (259)
T ss_dssp EEEEESCGGG
T ss_pred EEEEeCchhh
Confidence 9999998765
No 133
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.76 E-value=2.5e-08 Score=76.77 Aligned_cols=80 Identities=20% Similarity=0.106 Sum_probs=57.3
Q ss_pred ccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEE
Q 028335 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVT 179 (210)
Q Consensus 101 ~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~ 179 (210)
+.+..+.+++... ..++++|||+|||+|.+++.+++.+ +|+++|+ +.+++. . .++.+.
T Consensus 8 ~~~~~l~~~l~~~------~~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~----------~----~~~~~~ 66 (170)
T 3q87_B 8 EDTYTLMDALERE------GLEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES----------H----RGGNLV 66 (170)
T ss_dssp HHHHHHHHHHHHH------TCCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT----------C----SSSCEE
T ss_pred ccHHHHHHHHHhh------cCCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc----------c----cCCeEE
Confidence 3455566665431 1467899999999999999999989 9999999 888876 1 235555
Q ss_pred EeeCCCCCCCCccCCCCcEEEEccee
Q 028335 180 ELTWGDDPDQDLIQPLPDYGNESLLL 205 (210)
Q Consensus 180 ~l~w~~~~~~~~~~~~fD~Iia~Dvi 205 (210)
..++.+. +...+||+|++.-..
T Consensus 67 ~~d~~~~----~~~~~fD~i~~n~~~ 88 (170)
T 3q87_B 67 RADLLCS----INQESVDVVVFNPPY 88 (170)
T ss_dssp ECSTTTT----BCGGGCSEEEECCCC
T ss_pred ECChhhh----cccCCCCEEEECCCC
Confidence 5555432 233689999996543
No 134
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.75 E-value=3.2e-08 Score=83.22 Aligned_cols=75 Identities=19% Similarity=0.143 Sum_probs=55.7
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++|+..++.. ++.+...+..+. ..++||+|
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~-----~v~~~~~D~~~~-----~~~~~D~V 110 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYN-----NLEVYEGDAIKT-----VFPKFDVC 110 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCC-----CEEC----CCSS-----CCCCCSEE
T ss_pred CCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEECchhhC-----CcccCCEE
Confidence 46789999999999999999998889999999 99999999999876542 355444443322 12479999
Q ss_pred EEcceee
Q 028335 200 NESLLLF 206 (210)
Q Consensus 200 ia~DviY 206 (210)
++ +.-|
T Consensus 111 v~-n~py 116 (299)
T 2h1r_A 111 TA-NIPY 116 (299)
T ss_dssp EE-ECCG
T ss_pred EE-cCCc
Confidence 87 4444
No 135
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.75 E-value=1.1e-08 Score=84.52 Aligned_cols=74 Identities=11% Similarity=0.023 Sum_probs=58.5
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
...+|||||||+|.+++.++.. .++|+++|+ +.+++.++.|+..|+.. ..+...+.-. .....+||+
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~------~~~~v~D~~~----~~p~~~~Dv 201 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP------HRTNVADLLE----DRLDEPADV 201 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC------EEEEECCTTT----SCCCSCCSE
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC------ceEEEeeecc----cCCCCCcch
Confidence 4669999999999999999877 358999999 99999999999999864 4444444222 124568999
Q ss_pred EEEccee
Q 028335 199 GNESLLL 205 (210)
Q Consensus 199 Iia~Dvi 205 (210)
+++..++
T Consensus 202 aL~lkti 208 (281)
T 3lcv_B 202 TLLLKTL 208 (281)
T ss_dssp EEETTCH
T ss_pred HHHHHHH
Confidence 9998775
No 136
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.75 E-value=8.5e-09 Score=90.12 Aligned_cols=48 Identities=21% Similarity=0.155 Sum_probs=45.4
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccC
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRH 169 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~ 169 (210)
++++|||+|||+|..++.+++.|++|+++|+ +.+++.+++|++.|++.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~ 262 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLR 262 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCC
Confidence 4889999999999999999999999999999 99999999999999875
No 137
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.75 E-value=1.7e-08 Score=87.46 Aligned_cols=74 Identities=14% Similarity=-0.012 Sum_probs=59.7
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC--EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA--QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~--~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
.++.+|||+|||+|.+++.++..+. +|+++|+ +.+++.+++|+..+++. .++.+...+..+. .....+||
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~----~~i~~~~~D~~~~---~~~~~~fD 288 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVL----DKIKFIQGDATQL---SQYVDSVD 288 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCG----GGCEEEECCGGGG---GGTCSCEE
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCC----CceEEEECChhhC---CcccCCcC
Confidence 3678999999999999999999887 8999999 99999999999998864 3566666664332 22335789
Q ss_pred EEEE
Q 028335 198 YGNE 201 (210)
Q Consensus 198 ~Iia 201 (210)
+|++
T Consensus 289 ~Ii~ 292 (373)
T 3tm4_A 289 FAIS 292 (373)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9887
No 138
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.75 E-value=8.2e-09 Score=83.74 Aligned_cols=73 Identities=12% Similarity=0.110 Sum_probs=55.5
Q ss_pred CCCEEEEECCccCHHHHHHHHcC-CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g-~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
++.+|||+|||+|..+..+++.. .+|+++|+ +.+++.++++...++. ++.+...+|.... ..+.+.+||.|
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~------~~~~~~~~a~~~~-~~~~~~~FD~i 132 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTH------KVIPLKGLWEDVA-PTLPDGHFDGI 132 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSS------EEEEEESCHHHHG-GGSCTTCEEEE
T ss_pred CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCC------ceEEEeehHHhhc-ccccccCCceE
Confidence 78899999999999999998764 57999999 9999999999876653 3555555553321 12345689998
Q ss_pred EE
Q 028335 200 NE 201 (210)
Q Consensus 200 ia 201 (210)
+.
T Consensus 133 ~~ 134 (236)
T 3orh_A 133 LY 134 (236)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 139
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.75 E-value=3.1e-08 Score=81.93 Aligned_cols=72 Identities=17% Similarity=0.177 Sum_probs=57.8
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHh-ccCCCCCCceEEEEeeCCCCCCCCccCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENN-LRHGDLRGSAVVTELTWGDDPDQDLIQPL 195 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n-~~~~~~~~~~~~~~l~w~~~~~~~~~~~~ 195 (210)
.++.+|||+|||+|.+++.+++. +.+|+++|. +.+++.+++|+..+ +. .++.+...++.+. +...+
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-----~~v~~~~~d~~~~----~~~~~ 179 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-----GNVRTSRSDIADF----ISDQM 179 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-----TTEEEECSCTTTC----CCSCC
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-----CcEEEEECchhcc----CcCCC
Confidence 46789999999999999999986 679999999 99999999999887 63 2466666555432 23467
Q ss_pred CcEEEE
Q 028335 196 PDYGNE 201 (210)
Q Consensus 196 fD~Iia 201 (210)
||+|++
T Consensus 180 fD~Vi~ 185 (275)
T 1yb2_A 180 YDAVIA 185 (275)
T ss_dssp EEEEEE
T ss_pred ccEEEE
Confidence 999997
No 140
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.74 E-value=3.8e-08 Score=75.89 Aligned_cols=72 Identities=24% Similarity=0.236 Sum_probs=56.1
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||+|||+|..+..+++.+.+|+++|. +.+++.+++|+. ++.+...+..+. .+...+||+|+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~----------~~~~~~~d~~~~---~~~~~~~D~i~ 112 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFP----------EARWVVGDLSVD---QISETDFDLIV 112 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----------TSEEEECCTTTS---CCCCCCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCC----------CCcEEEcccccC---CCCCCceeEEE
Confidence 6789999999999999999998999999999 899999988752 244455554332 23346899999
Q ss_pred Ec-ceee
Q 028335 201 ES-LLLF 206 (210)
Q Consensus 201 a~-DviY 206 (210)
+. ++++
T Consensus 113 ~~~~~~~ 119 (195)
T 3cgg_A 113 SAGNVMG 119 (195)
T ss_dssp ECCCCGG
T ss_pred ECCcHHh
Confidence 98 6654
No 141
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.73 E-value=2e-08 Score=82.09 Aligned_cols=71 Identities=18% Similarity=0.149 Sum_probs=54.4
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.++++...+ +...+..+ ..+.+.+||+|+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~-----------~~~~d~~~---~~~~~~~fD~v~ 119 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVKN-----------VVEAKAED---LPFPSGAFEAVL 119 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCSC-----------EEECCTTS---CCSCTTCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCCC-----------EEECcHHH---CCCCCCCEEEEE
Confidence 6789999999999999999998999999999 99999998874311 23333322 223456899999
Q ss_pred Ecceee
Q 028335 201 ESLLLF 206 (210)
Q Consensus 201 a~DviY 206 (210)
+..+++
T Consensus 120 ~~~~~~ 125 (260)
T 2avn_A 120 ALGDVL 125 (260)
T ss_dssp ECSSHH
T ss_pred Ecchhh
Confidence 987553
No 142
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.73 E-value=5.3e-08 Score=81.34 Aligned_cols=73 Identities=16% Similarity=0.115 Sum_probs=57.1
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++++..++.. .++.+...+..+. .-++||+|
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~D~~~~-----~~~~fD~v 97 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVA----SKLQVLVGDVLKT-----DLPFFDTC 97 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTG----GGEEEEESCTTTS-----CCCCCSEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCC----CceEEEEcceecc-----cchhhcEE
Confidence 46789999999999999999998999999999 99999999998765432 3466666554332 12379998
Q ss_pred EEc
Q 028335 200 NES 202 (210)
Q Consensus 200 ia~ 202 (210)
++.
T Consensus 98 v~n 100 (285)
T 1zq9_A 98 VAN 100 (285)
T ss_dssp EEE
T ss_pred EEe
Confidence 883
No 143
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.73 E-value=7.4e-09 Score=83.24 Aligned_cols=76 Identities=8% Similarity=-0.108 Sum_probs=56.2
Q ss_pred CCCEEEEECCccCHHHHHHHHcC--CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g--~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.+.+|||||||+|.+++.+|+.. .+|+++|+ +.++..+++|+..+++. ++.+...+..+.....+.+..||.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-----nv~~~~~Da~~~l~~~~~~~~~d~ 108 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-----NLRVMCHDAVEVLHKMIPDNSLRM 108 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-----SEEEECSCHHHHHHHHSCTTCEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-----cEEEEECCHHHHHHHHcCCCChhe
Confidence 56799999999999999999874 57999999 99999999999988764 355544442211111134567898
Q ss_pred EEEc
Q 028335 199 GNES 202 (210)
Q Consensus 199 Iia~ 202 (210)
|++.
T Consensus 109 v~~~ 112 (218)
T 3dxy_A 109 VQLF 112 (218)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8875
No 144
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.73 E-value=4.3e-08 Score=81.01 Aligned_cols=73 Identities=14% Similarity=0.114 Sum_probs=57.3
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
.++.+|||+|||+|.+++.+++. +.+|+++|. +.+++.+++|+..+++. .++.+...++.+. +...+|
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~----~~~~~~ 182 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLI----ERVTIKVRDISEG----FDEKDV 182 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCG----GGEEEECCCGGGC----CSCCSE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC----CCEEEEECCHHHc----ccCCcc
Confidence 46789999999999999999987 468999999 99999999999887653 3455555554332 234579
Q ss_pred cEEEE
Q 028335 197 DYGNE 201 (210)
Q Consensus 197 D~Iia 201 (210)
|+|++
T Consensus 183 D~V~~ 187 (277)
T 1o54_A 183 DALFL 187 (277)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 99987
No 145
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.73 E-value=2.8e-08 Score=77.94 Aligned_cols=69 Identities=23% Similarity=0.341 Sum_probs=52.9
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.++.+|||+|||+|.+++.+++.+. +|+++|+ +.+++.+++|+. ++.+...+..+. ..+||+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----------~~~~~~~d~~~~------~~~~D~ 113 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----------GVNFMVADVSEI------SGKYDT 113 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----------TSEEEECCGGGC------CCCEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC----------CCEEEECcHHHC------CCCeeE
Confidence 4678999999999999999998876 6999999 999999999875 133444443221 147899
Q ss_pred EEEccee
Q 028335 199 GNESLLL 205 (210)
Q Consensus 199 Iia~Dvi 205 (210)
|++....
T Consensus 114 v~~~~p~ 120 (200)
T 1ne2_A 114 WIMNPPF 120 (200)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 8876553
No 146
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.73 E-value=1.8e-08 Score=81.53 Aligned_cols=77 Identities=12% Similarity=-0.029 Sum_probs=59.3
Q ss_pred cCCCEEEEECCccCHHHHHHHHcC-CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g-~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.++.+|||+|||+|.++..+++.+ .+|+++|+ +.+++.+++++..+ .++.+...++... .+...+||+
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~---~~~~~~fD~ 161 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-------PVGKFILASMETA---TLPPNTYDL 161 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-------SEEEEEESCGGGC---CCCSSCEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-------CceEEEEccHHHC---CCCCCCeEE
Confidence 367899999999999999988774 47999999 99999999887543 2355666555432 234568999
Q ss_pred EEEcceeee
Q 028335 199 GNESLLLFL 207 (210)
Q Consensus 199 Iia~DviY~ 207 (210)
|++..++++
T Consensus 162 v~~~~~l~~ 170 (254)
T 1xtp_A 162 IVIQWTAIY 170 (254)
T ss_dssp EEEESCGGG
T ss_pred EEEcchhhh
Confidence 999998764
No 147
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.72 E-value=3.8e-08 Score=78.58 Aligned_cols=85 Identities=15% Similarity=0.052 Sum_probs=60.2
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC-------EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCC-Cc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA-------QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DL 191 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~-------~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~-~~ 191 (210)
.++.+|||+|||+|..+..+++... +|+++|. +.+++.+++|+..++.......++.+...+....... ..
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 4678999999999999999998753 8999999 9999999999988763100013466666554332100 02
Q ss_pred cCCCCcEEEEccee
Q 028335 192 IQPLPDYGNESLLL 205 (210)
Q Consensus 192 ~~~~fD~Iia~Dvi 205 (210)
...+||+|++...+
T Consensus 159 ~~~~fD~I~~~~~~ 172 (227)
T 2pbf_A 159 ELGLFDAIHVGASA 172 (227)
T ss_dssp HHCCEEEEEECSBB
T ss_pred cCCCcCEEEECCch
Confidence 24579999987654
No 148
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.72 E-value=5.3e-08 Score=79.14 Aligned_cols=80 Identities=8% Similarity=-0.162 Sum_probs=56.0
Q ss_pred CCCEEEEECCccCHHHHHHHHcC--CEEEEEeh-HHHHHHHHHHHHHhccCCC---CCCceEEEEeeCCCCCCCCccCCC
Q 028335 122 HGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIENNLRHGD---LRGSAVVTELTWGDDPDQDLIQPL 195 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g--~~Vv~tD~-~~~l~~~~~N~~~n~~~~~---~~~~~~~~~l~w~~~~~~~~~~~~ 195 (210)
++.+|||+|||+|.+++.+++.+ .+|+++|+ +.+++.+++|+..+..... ...++.+...+..+.....+....
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 66799999999999999999875 47999999 8999999999988721100 012466666665432222233456
Q ss_pred CcEEEE
Q 028335 196 PDYGNE 201 (210)
Q Consensus 196 fD~Iia 201 (210)
+|.|+.
T Consensus 129 ~d~v~~ 134 (246)
T 2vdv_E 129 LSKMFF 134 (246)
T ss_dssp EEEEEE
T ss_pred cCEEEE
Confidence 777764
No 149
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.72 E-value=8.2e-08 Score=90.36 Aligned_cols=84 Identities=18% Similarity=0.078 Sum_probs=62.6
Q ss_pred cCCCEEEEECCccCHHHHHHHHcC---CEEEEEeh-HHHHHHHHHHHHHhccC-CCCCCceEEEEeeCCCCCCCCccCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLG---AQVILTDL-PDRLRLLKKNIENNLRH-GDLRGSAVVTELTWGDDPDQDLIQPL 195 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g---~~Vv~tD~-~~~l~~~~~N~~~n~~~-~~~~~~~~~~~l~w~~~~~~~~~~~~ 195 (210)
.++.+|||||||+|.+++.+++.+ .+|+++|+ +.+++.+++++...... .....++.+...+..+ ......+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~d---Lp~~d~s 796 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILE---FDSRLHD 796 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTS---CCTTSCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHh---CCcccCC
Confidence 378899999999999999999987 68999999 99999999987654211 0011346666655433 2234578
Q ss_pred CcEEEEcceeee
Q 028335 196 PDYGNESLLLFL 207 (210)
Q Consensus 196 fD~Iia~DviY~ 207 (210)
||+|++.+++.+
T Consensus 797 FDlVV~~eVLeH 808 (950)
T 3htx_A 797 VDIGTCLEVIEH 808 (950)
T ss_dssp CCEEEEESCGGG
T ss_pred eeEEEEeCchhh
Confidence 999999998864
No 150
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.72 E-value=2.5e-09 Score=84.05 Aligned_cols=91 Identities=18% Similarity=0.087 Sum_probs=45.5
Q ss_pred HHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEE
Q 028335 103 GVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVT 179 (210)
Q Consensus 103 a~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~ 179 (210)
+..+..++...... ..++.+|||+|||+|.+++.+++. +.+|+++|+ +.+++.+++|+..++.. +.+.
T Consensus 14 ~~~~~~~~~~~l~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~------~~~~ 84 (215)
T 4dzr_A 14 TEVLVEEAIRFLKR---MPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAV------VDWA 84 (215)
T ss_dssp HHHHHHHHHHHHTT---CCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------------CC
T ss_pred HHHHHHHHHHHhhh---cCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCc------eEEE
Confidence 34455555543321 146789999999999999999988 458999999 99999999999877542 2222
Q ss_pred EeeCCCCCCC-CccCCCCcEEEEc
Q 028335 180 ELTWGDDPDQ-DLIQPLPDYGNES 202 (210)
Q Consensus 180 ~l~w~~~~~~-~~~~~~fD~Iia~ 202 (210)
..++.+.... .....+||+|++.
T Consensus 85 ~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 85 AADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp HHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred EcchHhhhhhhhhccCcccEEEEC
Confidence 2332221000 0012679999984
No 151
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.71 E-value=6.8e-08 Score=77.88 Aligned_cols=75 Identities=12% Similarity=0.162 Sum_probs=58.5
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|.+++.+++.+.+|+++|+ +.+++.+++|+..+++. .++.+...++.+.. ....+||+|
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~---~~~~~~D~v 162 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLG----KNVKFFNVDFKDAE---VPEGIFHAA 162 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCC----TTEEEECSCTTTSC---CCTTCBSEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCC----CcEEEEEcChhhcc---cCCCcccEE
Confidence 46789999999999999999988889999999 99999999999887653 34555555543321 134579999
Q ss_pred EEc
Q 028335 200 NES 202 (210)
Q Consensus 200 ia~ 202 (210)
++.
T Consensus 163 ~~~ 165 (248)
T 2yvl_A 163 FVD 165 (248)
T ss_dssp EEC
T ss_pred EEC
Confidence 873
No 152
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.71 E-value=6.2e-08 Score=81.54 Aligned_cols=74 Identities=22% Similarity=0.138 Sum_probs=56.0
Q ss_pred ccCCCEEEEECCccC-HHHHHHHH-cCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 120 LLHGKKIVELGSGCG-LVGCIAAL-LGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 120 ~~~~~~VLELGcGtG-l~~l~la~-~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
+.++.+|||+|||+| +.++.+++ .+++|+++|+ +++++.+++|++..+.. ++.+..-+-.+ +.+.+|
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~-----~v~~v~gDa~~-----l~d~~F 189 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVD-----GVNVITGDETV-----IDGLEF 189 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCC-----SEEEEESCGGG-----GGGCCC
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCC-----CeEEEECchhh-----CCCCCc
Confidence 457899999999997 45566776 4889999999 99999999999887652 46665544222 235789
Q ss_pred cEEEEcc
Q 028335 197 DYGNESL 203 (210)
Q Consensus 197 D~Iia~D 203 (210)
|+|+.+-
T Consensus 190 DvV~~~a 196 (298)
T 3fpf_A 190 DVLMVAA 196 (298)
T ss_dssp SEEEECT
T ss_pred CEEEECC
Confidence 9998753
No 153
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.71 E-value=9e-08 Score=77.59 Aligned_cols=73 Identities=16% Similarity=0.117 Sum_probs=58.2
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHh-ccCCCCCCceEEEEeeCCCCCCCCccCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENN-LRHGDLRGSAVVTELTWGDDPDQDLIQPL 195 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n-~~~~~~~~~~~~~~l~w~~~~~~~~~~~~ 195 (210)
.++.+|||+|||+|.+++.+++. +.+|+++|. +.+++.+++|+..+ +. .++.+...+..+. .+...+
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~-----~~v~~~~~d~~~~---~~~~~~ 166 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV-----ENVRFHLGKLEEA---ELEEAA 166 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC-----CCEEEEESCGGGC---CCCTTC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-----CCEEEEECchhhc---CCCCCC
Confidence 47889999999999999999987 569999999 99999999999887 62 3566666665432 133457
Q ss_pred CcEEEE
Q 028335 196 PDYGNE 201 (210)
Q Consensus 196 fD~Iia 201 (210)
||+|++
T Consensus 167 ~D~v~~ 172 (258)
T 2pwy_A 167 YDGVAL 172 (258)
T ss_dssp EEEEEE
T ss_pred cCEEEE
Confidence 999987
No 154
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.71 E-value=3.2e-08 Score=78.31 Aligned_cols=73 Identities=14% Similarity=0.022 Sum_probs=55.3
Q ss_pred CCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 122 HGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
++++|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.. .++.+...+..+.... ... ||
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~~--~~~-fD 128 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLI----DRVELQVGDPLGIAAG--QRD-ID 128 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGG----GGEEEEESCHHHHHTT--CCS-EE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC----ceEEEEEecHHHHhcc--CCC-CC
Confidence 6789999999999999999976 569999999 99999999999887754 3466655543221111 124 88
Q ss_pred EEEE
Q 028335 198 YGNE 201 (210)
Q Consensus 198 ~Iia 201 (210)
+|++
T Consensus 129 ~v~~ 132 (210)
T 3c3p_A 129 ILFM 132 (210)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 155
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.71 E-value=3.2e-09 Score=87.74 Aligned_cols=76 Identities=18% Similarity=0.122 Sum_probs=57.9
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-H-------HHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccC
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-P-------DRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQ 193 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~-------~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~ 193 (210)
++.+|||+|||+|..++.+++.+.+|+++|+ + .+++.+++|++.|+.. +++.+...+..+... .+.+
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~----~ri~~~~~d~~~~l~-~~~~ 157 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTA----ARINLHFGNAAEQMP-ALVK 157 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH----TTEEEEESCHHHHHH-HHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCc----cCeEEEECCHHHHHH-hhhc
Confidence 5679999999999999999999999999999 9 8999999999988764 346666655322110 1122
Q ss_pred --CCCcEEEEc
Q 028335 194 --PLPDYGNES 202 (210)
Q Consensus 194 --~~fD~Iia~ 202 (210)
.+||+|+..
T Consensus 158 ~~~~fD~V~~d 168 (258)
T 2r6z_A 158 TQGKPDIVYLD 168 (258)
T ss_dssp HHCCCSEEEEC
T ss_pred cCCCccEEEEC
Confidence 478988763
No 156
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.71 E-value=3.7e-08 Score=81.24 Aligned_cols=73 Identities=21% Similarity=0.147 Sum_probs=57.3
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.++++. .++.+...+..... + ..+||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~---~-~~~fD~v 121 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY----------PHLHFDVADARNFR---V-DKPLDAV 121 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----------TTSCEEECCTTTCC---C-SSCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC----------CCCEEEECChhhCC---c-CCCcCEE
Confidence 36789999999999999999998889999999 99999998875 12444555544321 2 4589999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..+++.
T Consensus 122 ~~~~~l~~ 129 (279)
T 3ccf_A 122 FSNAMLHW 129 (279)
T ss_dssp EEESCGGG
T ss_pred EEcchhhh
Confidence 99998764
No 157
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.70 E-value=1.1e-08 Score=85.73 Aligned_cols=80 Identities=14% Similarity=-0.022 Sum_probs=62.8
Q ss_pred ccCCCEEEEECCccCHHHHHHH--Hc-CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCIAA--LL-GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPL 195 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la--~~-g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~ 195 (210)
+.++.+|||+|||+|..++.++ .. +.+|+++|+ +.+++.+++|+..++.. +++.+...++.+.. +. .+
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~---~~-~~ 187 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALA----GQITLHRQDAWKLD---TR-EG 187 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTG----GGEEEEECCGGGCC---CC-SC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCC----CceEEEECchhcCC---cc-CC
Confidence 3478899999999999999885 22 569999999 99999999999877654 45777777654432 22 68
Q ss_pred CcEEEEcceeee
Q 028335 196 PDYGNESLLLFL 207 (210)
Q Consensus 196 fD~Iia~DviY~ 207 (210)
||+|++..+++.
T Consensus 188 fD~v~~~~~~~~ 199 (305)
T 3ocj_A 188 YDLLTSNGLNIY 199 (305)
T ss_dssp EEEEECCSSGGG
T ss_pred eEEEEECChhhh
Confidence 999999887764
No 158
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.70 E-value=9.7e-08 Score=80.35 Aligned_cols=76 Identities=14% Similarity=0.003 Sum_probs=58.1
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++++... .++.+...|..+. .+...+||.|
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~-------~~v~vi~gD~l~~---~~~~~~fD~I 118 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELY-------NNIEIIWGDALKV---DLNKLDFNKV 118 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHC-------SSEEEEESCTTTS---CGGGSCCSEE
T ss_pred CCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccC-------CCeEEEECchhhC---CcccCCccEE
Confidence 46789999999999999999998889999999 99999999998721 2466666554332 2334579999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++. .-|+
T Consensus 119 v~N-lPy~ 125 (295)
T 3gru_A 119 VAN-LPYQ 125 (295)
T ss_dssp EEE-CCGG
T ss_pred EEe-Cccc
Confidence 965 4443
No 159
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.70 E-value=9.7e-09 Score=82.87 Aligned_cols=73 Identities=15% Similarity=0.080 Sum_probs=53.6
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++++|||+|||+|.++..+++.+.+|+++|+ +.+++.++++ . .+...+..+.. ..+.+.+||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-----~--------~~~~~d~~~~~-~~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK-----F--------NVVKSDAIEYL-KSLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT-----S--------EEECSCHHHHH-HTSCTTCBSEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh-----c--------ceeeccHHHHh-hhcCCCCeeEE
Confidence 36789999999999999999988999999999 8999988877 1 11111111100 02345689999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 106 ~~~~~l~~ 113 (240)
T 3dli_A 106 MISHFVEH 113 (240)
T ss_dssp EEESCGGG
T ss_pred EECCchhh
Confidence 99998764
No 160
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.69 E-value=1.8e-08 Score=81.53 Aligned_cols=58 Identities=16% Similarity=0.175 Sum_probs=48.1
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEee
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELT 182 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~ 182 (210)
.++++|||+|||+|..++.+++. +.+|+++|. +.+++.+++|+..++.. +++.+...+
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~----~~v~~~~~d 120 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLE----NKIFLKLGS 120 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG----GGEEEEESC
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CCEEEEECC
Confidence 36789999999999999999976 569999999 99999999999887654 345555544
No 161
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.69 E-value=2.6e-08 Score=81.06 Aligned_cols=45 Identities=29% Similarity=0.324 Sum_probs=40.2
Q ss_pred CCCEEEEECCccCHHHHHHHHc----CCEEEEEeh-HHHHHHHHHHHHHh
Q 028335 122 HGKKIVELGSGCGLVGCIAALL----GAQVILTDL-PDRLRLLKKNIENN 166 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~----g~~Vv~tD~-~~~l~~~~~N~~~n 166 (210)
++.+|||+|||+|.+++.+++. +.+|+++|+ +.+++.+++|+..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~ 100 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALL 100 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTT
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHh
Confidence 5679999999999999999876 458999999 99999999998766
No 162
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.68 E-value=1.7e-08 Score=82.54 Aligned_cols=76 Identities=16% Similarity=0.068 Sum_probs=56.9
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCc-----
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL----- 191 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~----- 191 (210)
.++++|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.. .++.+...+..+... .+
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~----~~i~~~~gda~~~l~-~l~~~~~ 152 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVD----HKIDFREGPALPVLD-EMIKDEK 152 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHH-HHHHSGG
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CCeEEEECCHHHHHH-HHHhccC
Confidence 36789999999999999999976 679999999 89999999999987753 356655544322111 01
Q ss_pred cCCCCcEEEE
Q 028335 192 IQPLPDYGNE 201 (210)
Q Consensus 192 ~~~~fD~Iia 201 (210)
...+||+|++
T Consensus 153 ~~~~fD~V~~ 162 (247)
T 1sui_A 153 NHGSYDFIFV 162 (247)
T ss_dssp GTTCBSEEEE
T ss_pred CCCCEEEEEE
Confidence 1467999986
No 163
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.68 E-value=5.6e-08 Score=77.55 Aligned_cols=82 Identities=17% Similarity=0.077 Sum_probs=59.2
Q ss_pred cCCCEEEEECCccCHHHHHHHHc-C--CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL-G--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~-g--~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
.++.+|||+|||+|..+..+++. + .+|+++|+ +.+++.+++|+..++.......++.+...+.... .....+|
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~f 152 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG---YAEEAPY 152 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC---CGGGCCE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC---cccCCCc
Confidence 46789999999999999999876 4 58999999 9999999999987653000012466666554322 1124579
Q ss_pred cEEEEccee
Q 028335 197 DYGNESLLL 205 (210)
Q Consensus 197 D~Iia~Dvi 205 (210)
|+|++...+
T Consensus 153 D~i~~~~~~ 161 (226)
T 1i1n_A 153 DAIHVGAAA 161 (226)
T ss_dssp EEEEECSBB
T ss_pred CEEEECCch
Confidence 999887654
No 164
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.67 E-value=1.8e-08 Score=80.56 Aligned_cols=77 Identities=16% Similarity=0.111 Sum_probs=56.4
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCcc-C--
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLI-Q-- 193 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~-~-- 193 (210)
.++++|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.. .++.+...+..+... .+. .
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~----~~i~~~~~d~~~~~~-~~~~~~~ 142 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAE----HKIDLRLKPALETLD-ELLAAGE 142 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCT----TTEEEEESCHHHHHH-HHHHTTC
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC----CeEEEEEcCHHHHHH-HHHhcCC
Confidence 46789999999999999999975 568999999 99999999999988764 345555544221100 011 1
Q ss_pred -CCCcEEEEc
Q 028335 194 -PLPDYGNES 202 (210)
Q Consensus 194 -~~fD~Iia~ 202 (210)
.+||+|++.
T Consensus 143 ~~~~D~v~~d 152 (229)
T 2avd_A 143 AGTFDVAVVD 152 (229)
T ss_dssp TTCEEEEEEC
T ss_pred CCCccEEEEC
Confidence 578988863
No 165
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.67 E-value=6.4e-08 Score=77.22 Aligned_cols=75 Identities=9% Similarity=0.022 Sum_probs=49.5
Q ss_pred cCCCEEEEECCccCHHHHHHHHcC--CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g--~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
.++.+|||||||+|..+..+++.. .+|+++|+ +.+++.+.+++... .++.+...+............+||
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~-------~~v~~~~~d~~~~~~~~~~~~~fD 128 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-------NNIIPLLFDASKPWKYSGIVEKVD 128 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-------SSEEEECSCTTCGGGTTTTCCCEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC-------CCeEEEEcCCCCchhhccccccee
Confidence 467899999999999999988763 58999999 88887777665532 123333222211100011235799
Q ss_pred EEEEc
Q 028335 198 YGNES 202 (210)
Q Consensus 198 ~Iia~ 202 (210)
+|++.
T Consensus 129 ~V~~~ 133 (210)
T 1nt2_A 129 LIYQD 133 (210)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99874
No 166
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.67 E-value=6e-08 Score=77.98 Aligned_cols=75 Identities=13% Similarity=0.088 Sum_probs=54.4
Q ss_pred ccCCCEEEEECCccCHHHHHHHHc-C--CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALL-G--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPL 195 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~-g--~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~ 195 (210)
+.++.+|||+|||+|.++..+++. + .+|+++|+ +.+++.+.+++..+ .++.+...+..+.........+
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-------~~v~~~~~d~~~~~~~~~~~~~ 147 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-------TNIIPVIEDARHPHKYRMLIAM 147 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-------TTEEEECSCTTCGGGGGGGCCC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-------CCeEEEEcccCChhhhcccCCc
Confidence 346789999999999999999976 3 58999999 88888888888775 1355544444332111223468
Q ss_pred CcEEEE
Q 028335 196 PDYGNE 201 (210)
Q Consensus 196 fD~Iia 201 (210)
||+|++
T Consensus 148 ~D~V~~ 153 (233)
T 2ipx_A 148 VDVIFA 153 (233)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999997
No 167
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.66 E-value=2.2e-08 Score=80.81 Aligned_cols=79 Identities=10% Similarity=-0.047 Sum_probs=58.5
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCC-Cc-cCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQ-DL-IQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~-~~-~~~~fD 197 (210)
.++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.+++++.. .++.+...+..+.... .+ ...+||
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTA--------ANISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCC--------TTEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcc--------cCceEEECcccccccccccccccCcc
Confidence 46789999999999999999999889999999 9999999988621 2466666654332110 00 012599
Q ss_pred EEEEcceeee
Q 028335 198 YGNESLLLFL 207 (210)
Q Consensus 198 ~Iia~DviY~ 207 (210)
+|++..+++.
T Consensus 127 ~v~~~~~~~~ 136 (245)
T 3ggd_A 127 NIYMRTGFHH 136 (245)
T ss_dssp EEEEESSSTT
T ss_pred EEEEcchhhc
Confidence 9999988764
No 168
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.66 E-value=2e-08 Score=80.90 Aligned_cols=75 Identities=12% Similarity=-0.048 Sum_probs=54.1
Q ss_pred CCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 123 GKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 123 ~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
+.+|||||||+|..++.+++. +.+|+++|+ +.+++.+++|++.++.. ..++.+...+..+... .+.+.+||+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~---~~~i~~~~gda~~~l~-~~~~~~fD~ 132 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYS---PSRVRFLLSRPLDVMS-RLANDSYQL 132 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCC---GGGEEEECSCHHHHGG-GSCTTCEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---cCcEEEEEcCHHHHHH-HhcCCCcCe
Confidence 349999999999999999874 569999999 99999999999987753 0245554433211111 112468999
Q ss_pred EEE
Q 028335 199 GNE 201 (210)
Q Consensus 199 Iia 201 (210)
|+.
T Consensus 133 V~~ 135 (221)
T 3dr5_A 133 VFG 135 (221)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 169
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.66 E-value=9.2e-08 Score=80.72 Aligned_cols=79 Identities=16% Similarity=0.065 Sum_probs=63.3
Q ss_pred cCCCEEEEECCccCHHHHHHHHc--CCEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.++.+|||+|||+|..+..+++. +.+++++|++.+++.+++++..+++. .++.+...++.+. .+ ...||+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~---~~-~~~~D~ 235 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVA----SRYHTIAGSAFEV---DY-GNDYDL 235 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCG----GGEEEEESCTTTS---CC-CSCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCC----cceEEEecccccC---CC-CCCCcE
Confidence 35679999999999999999876 56999999998899999999887654 4577777776442 12 234999
Q ss_pred EEEcceeee
Q 028335 199 GNESLLLFL 207 (210)
Q Consensus 199 Iia~DviY~ 207 (210)
|++..++++
T Consensus 236 v~~~~~l~~ 244 (335)
T 2r3s_A 236 VLLPNFLHH 244 (335)
T ss_dssp EEEESCGGG
T ss_pred EEEcchhcc
Confidence 999999875
No 170
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.66 E-value=1e-07 Score=76.26 Aligned_cols=72 Identities=13% Similarity=-0.057 Sum_probs=54.6
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||+|||+|..+..+++.+.+|+++|+ +.+++.++++. .++.+...+..+. .. +.+||+|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~~---~~-~~~~D~v 104 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL----------PDATLHQGDMRDF---RL-GRKFSAV 104 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC----------TTCEEEECCTTTC---CC-SSCEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC----------CCCEEEECCHHHc---cc-CCCCcEE
Confidence 36789999999999999999988889999999 99999998873 1245555554332 12 4689999
Q ss_pred EE-cceee
Q 028335 200 NE-SLLLF 206 (210)
Q Consensus 200 ia-~DviY 206 (210)
++ .+++.
T Consensus 105 ~~~~~~~~ 112 (239)
T 3bxo_A 105 VSMFSSVG 112 (239)
T ss_dssp EECTTGGG
T ss_pred EEcCchHh
Confidence 95 44553
No 171
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.65 E-value=1.9e-07 Score=78.35 Aligned_cols=86 Identities=14% Similarity=0.016 Sum_probs=60.1
Q ss_pred CCCEEEEECCccCHHHHHHHHc-CCEEEEEeh-HHHHHHHHHHHHHhccCCC--CCCceEEEEeeCCCCCC-CCcc--CC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGD--LRGSAVVTELTWGDDPD-QDLI--QP 194 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~-g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~--~~~~~~~~~l~w~~~~~-~~~~--~~ 194 (210)
++.+|||+|||+|..+..+++. +.+|+++|+ +.+++.++++...+..... ...++.+...+...... ..+. ..
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 6779999999999999988875 558999999 9999999999876531100 01246666666544320 0122 34
Q ss_pred CCcEEEEcceeee
Q 028335 195 LPDYGNESLLLFL 207 (210)
Q Consensus 195 ~fD~Iia~DviY~ 207 (210)
+||+|++..++++
T Consensus 114 ~fD~V~~~~~l~~ 126 (313)
T 3bgv_A 114 CFDICSCQFVCHY 126 (313)
T ss_dssp CEEEEEEETCGGG
T ss_pred CEEEEEEecchhh
Confidence 8999999998743
No 172
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.65 E-value=1.4e-08 Score=88.61 Aligned_cols=78 Identities=18% Similarity=0.020 Sum_probs=58.5
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhcc-CCCCCCceEEEEeeCCCCCCCCc-cCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLR-HGDLRGSAVVTELTWGDDPDQDL-IQPLP 196 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~-~~~~~~~~~~~~l~w~~~~~~~~-~~~~f 196 (210)
.++++|||+|||+|.+++.+++.|+ +|+++|+ +.+++.+++|+..|++ . .++.+...+..+...... ...+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~----~~v~~~~~D~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDL----SKAEFVRDDVFKLLRTYRDRGEKF 294 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCG----GGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc----cceEEEECCHHHHHHHHHhcCCCC
Confidence 3788999999999999999999865 8999999 9999999999999986 3 246666555322111000 13578
Q ss_pred cEEEEc
Q 028335 197 DYGNES 202 (210)
Q Consensus 197 D~Iia~ 202 (210)
|+|++.
T Consensus 295 D~Ii~d 300 (396)
T 3c0k_A 295 DVIVMD 300 (396)
T ss_dssp EEEEEC
T ss_pred CEEEEC
Confidence 988873
No 173
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.64 E-value=6e-08 Score=77.97 Aligned_cols=72 Identities=15% Similarity=0.130 Sum_probs=52.9
Q ss_pred cCCCEEEEECCccCHHHHHHHHc-C-CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCC-CCccCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL-G-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-QDLIQPLP 196 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~-g-~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~-~~~~~~~f 196 (210)
.++.+|||+|||+|.+++.+++. + .+|+++|+ +.+++.+++|+..+ .++.+...+...... ..+. .+|
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------~~v~~~~~d~~~~~~~~~~~-~~~ 144 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-------ENIIPILGDANKPQEYANIV-EKV 144 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-------TTEEEEECCTTCGGGGTTTS-CCE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-------CCeEEEECCCCCcccccccC-ccE
Confidence 36789999999999999999987 4 68999999 99999999997654 235555555433110 1122 579
Q ss_pred cEEE
Q 028335 197 DYGN 200 (210)
Q Consensus 197 D~Ii 200 (210)
|+|+
T Consensus 145 D~v~ 148 (230)
T 1fbn_A 145 DVIY 148 (230)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9988
No 174
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.64 E-value=9.5e-08 Score=78.75 Aligned_cols=58 Identities=16% Similarity=0.202 Sum_probs=47.9
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++|+... .++.+...|..+
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~-------~~v~~i~~D~~~ 86 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQ-------KNITIYQNDALQ 86 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTC-------TTEEEEESCTTT
T ss_pred CCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhC-------CCcEEEEcchHh
Confidence 46789999999999999999999999999999 99999999998641 246666655443
No 175
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.63 E-value=2.9e-08 Score=92.70 Aligned_cols=76 Identities=20% Similarity=0.046 Sum_probs=58.7
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.++++|||||||+|.+++.+++.|+ +|+++|+ +.+++.+++|++.|++.. .++.+...+..+... ....+||+
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~---~~v~~i~~D~~~~l~--~~~~~fD~ 612 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTG---RAHRLIQADCLAWLR--EANEQFDL 612 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCS---TTEEEEESCHHHHHH--HCCCCEEE
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCc---cceEEEecCHHHHHH--hcCCCccE
Confidence 4789999999999999999999887 5999999 999999999999998641 246666554322111 12357998
Q ss_pred EEE
Q 028335 199 GNE 201 (210)
Q Consensus 199 Iia 201 (210)
|++
T Consensus 613 Ii~ 615 (703)
T 3v97_A 613 IFI 615 (703)
T ss_dssp EEE
T ss_pred EEE
Confidence 886
No 176
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.63 E-value=1.3e-07 Score=81.08 Aligned_cols=77 Identities=17% Similarity=0.126 Sum_probs=61.9
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
++.+|||+|||+|.+++.+++. +.+++++|++.+++.+++|+..+++. .++.+...++.+. ++ ..||+|
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~----~~-~~~D~v 252 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLA----DRVTVAEGDFFKP----LP-VTADVV 252 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCT----TTEEEEECCTTSC----CS-CCEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCC----CceEEEeCCCCCc----CC-CCCCEE
Confidence 5679999999999999999876 45899999988999999999887654 4677777775432 11 249999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 253 ~~~~vl~~ 260 (374)
T 1qzz_A 253 LLSFVLLN 260 (374)
T ss_dssp EEESCGGG
T ss_pred EEeccccC
Confidence 99999864
No 177
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.63 E-value=6.7e-08 Score=78.49 Aligned_cols=80 Identities=6% Similarity=-0.090 Sum_probs=55.2
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccC-CCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRH-GDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~-~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
++.+|||||||+|.+++.+++. +.+|+++|+ +.+++.+++|+...... .....++.+...+..+.....+....||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 5668999999999999999987 458999999 99999999998652100 0001356776666543211113456788
Q ss_pred EEEE
Q 028335 198 YGNE 201 (210)
Q Consensus 198 ~Iia 201 (210)
.|+.
T Consensus 126 ~v~~ 129 (235)
T 3ckk_A 126 KMFF 129 (235)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8864
No 178
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.62 E-value=1.6e-08 Score=88.02 Aligned_cols=76 Identities=18% Similarity=0.059 Sum_probs=58.2
Q ss_pred CCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCC-ccCCCCcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD-LIQPLPDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~-~~~~~fD~ 198 (210)
++++|||+|||+|.+++.+++.|+ +|+++|+ +.+++.+++|+..|++. .++.+...+..+..... ....+||+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~----~~v~~~~~d~~~~~~~~~~~~~~fD~ 292 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVE----DRMKFIVGSAFEEMEKLQKKGEKFDI 292 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----ccceEEECCHHHHHHHHHhhCCCCCE
Confidence 788999999999999999999866 8999999 99999999999999864 24666665532211100 01357999
Q ss_pred EEE
Q 028335 199 GNE 201 (210)
Q Consensus 199 Iia 201 (210)
|++
T Consensus 293 Vi~ 295 (396)
T 2as0_A 293 VVL 295 (396)
T ss_dssp EEE
T ss_pred EEE
Confidence 887
No 179
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.62 E-value=9e-08 Score=76.48 Aligned_cols=75 Identities=20% Similarity=0.200 Sum_probs=54.5
Q ss_pred cCCCEEEEECCccCHHHHHHHHc-C--CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL-G--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~-g--~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
.++.+|||+|||+|.+++.+++. + .+|+++|. +.+++.+++|+..+ .++.+...+..+.........+|
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-------~~v~~~~~d~~~~~~~~~~~~~~ 144 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-------RNIVPILGDATKPEEYRALVPKV 144 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-------TTEEEEECCTTCGGGGTTTCCCE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-------CCCEEEEccCCCcchhhcccCCc
Confidence 46789999999999999999975 3 58999999 89999999988755 14566665544321101123479
Q ss_pred cEEEEc
Q 028335 197 DYGNES 202 (210)
Q Consensus 197 D~Iia~ 202 (210)
|+|++.
T Consensus 145 D~v~~~ 150 (227)
T 1g8a_A 145 DVIFED 150 (227)
T ss_dssp EEEEEC
T ss_pred eEEEEC
Confidence 999953
No 180
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.61 E-value=1.1e-07 Score=79.99 Aligned_cols=85 Identities=11% Similarity=-0.096 Sum_probs=53.5
Q ss_pred CCCEEEEECCccCHHHHHHHHc-CCEEEEEeh-HHHHHHHHHHHHHhccCCCC-CCceEEEEeeCCCCC-----CCCccC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLRHGDL-RGSAVVTELTWGDDP-----DQDLIQ 193 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~-g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~-~~~~~~~~l~w~~~~-----~~~~~~ 193 (210)
++.+|||||||+|.....+++. +.+|+++|+ +.+|+.|++.....+..... .-.+.+...+..... ...+.+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 4789999999999655555544 569999999 99999999987655422000 001233333321110 001234
Q ss_pred CCCcEEEEcceee
Q 028335 194 PLPDYGNESLLLF 206 (210)
Q Consensus 194 ~~fD~Iia~DviY 206 (210)
.+||+|++..+++
T Consensus 128 ~~FD~V~~~~~lh 140 (302)
T 2vdw_A 128 GKFNIIDWQFAIH 140 (302)
T ss_dssp SCEEEEEEESCGG
T ss_pred CCeeEEEECchHH
Confidence 6899999988774
No 181
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.61 E-value=6.4e-08 Score=76.22 Aligned_cols=70 Identities=14% Similarity=-0.024 Sum_probs=52.9
Q ss_pred CCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
++.+|||+|||+|..+..+ +. +|+++|+ +.+++.++++. . ++.+...+..+ ..+.+.+||+|
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~--~--------~~~~~~~d~~~---~~~~~~~fD~v 99 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA--P--------EATWVRAWGEA---LPFPGESFDVV 99 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC--T--------TSEEECCCTTS---CCSCSSCEEEE
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC--C--------CcEEEEccccc---CCCCCCcEEEE
Confidence 7789999999999988777 77 9999999 89999998886 1 23334444322 22345689999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 100 ~~~~~l~~ 107 (211)
T 2gs9_A 100 LLFTTLEF 107 (211)
T ss_dssp EEESCTTT
T ss_pred EEcChhhh
Confidence 99988764
No 182
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.61 E-value=5.6e-08 Score=78.82 Aligned_cols=76 Identities=18% Similarity=0.117 Sum_probs=56.8
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCc-----
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL----- 191 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~----- 191 (210)
.+.++|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.. +++.+...+..+... .+
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~----~~i~~~~gda~~~l~-~l~~~~~ 143 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVE----HKINFIESDAMLALD-NLLQGQE 143 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHH-HHHHSTT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHH-HHHhccC
Confidence 36789999999999999999975 579999999 99999999999987764 356665544322111 01
Q ss_pred cCCCCcEEEE
Q 028335 192 IQPLPDYGNE 201 (210)
Q Consensus 192 ~~~~fD~Iia 201 (210)
...+||+|+.
T Consensus 144 ~~~~fD~I~~ 153 (237)
T 3c3y_A 144 SEGSYDFGFV 153 (237)
T ss_dssp CTTCEEEEEE
T ss_pred CCCCcCEEEE
Confidence 1357999885
No 183
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.61 E-value=2.2e-07 Score=76.39 Aligned_cols=74 Identities=18% Similarity=0.179 Sum_probs=56.4
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHh-c-cCCCCCCceEEEEeeCCCCCCCCccCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENN-L-RHGDLRGSAVVTELTWGDDPDQDLIQP 194 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n-~-~~~~~~~~~~~~~l~w~~~~~~~~~~~ 194 (210)
.++.+|||+|||+|.+++.+++. +.+|+++|. +.+++.+++|+..+ + +. .++.+...+..+. .+...
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~----~~v~~~~~d~~~~---~~~~~ 170 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPP----DNWRLVVSDLADS---ELPDG 170 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCC----TTEEEECSCGGGC---CCCTT
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCC----CcEEEEECchHhc---CCCCC
Confidence 46789999999999999999975 569999999 99999999999887 4 22 2455555443322 22346
Q ss_pred CCcEEEE
Q 028335 195 LPDYGNE 201 (210)
Q Consensus 195 ~fD~Iia 201 (210)
+||+|++
T Consensus 171 ~~D~v~~ 177 (280)
T 1i9g_A 171 SVDRAVL 177 (280)
T ss_dssp CEEEEEE
T ss_pred ceeEEEE
Confidence 7999987
No 184
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.61 E-value=4.9e-08 Score=78.82 Aligned_cols=78 Identities=19% Similarity=0.058 Sum_probs=56.3
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCC-ccC--
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD-LIQ-- 193 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~-~~~-- 193 (210)
.++++|||+|||+|..++.+++. +.+|+++|. +.+++.+++|+..++.. .++.+...+..+..... ..+
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~----~~i~~~~~d~~~~l~~l~~~~~~ 146 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVA----EKISLRLGPALATLEQLTQGKPL 146 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG----GGEEEEESCHHHHHHHHHTSSSC
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHHHHHhcCCC
Confidence 36789999999999999999975 468999999 99999999999888764 34555554422110000 011
Q ss_pred CCCcEEEEc
Q 028335 194 PLPDYGNES 202 (210)
Q Consensus 194 ~~fD~Iia~ 202 (210)
.+||+|++.
T Consensus 147 ~~fD~V~~d 155 (232)
T 3cbg_A 147 PEFDLIFID 155 (232)
T ss_dssp CCEEEEEEC
T ss_pred CCcCEEEEC
Confidence 579998853
No 185
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.60 E-value=8.7e-09 Score=84.05 Aligned_cols=77 Identities=18% Similarity=0.064 Sum_probs=57.0
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCc---cC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL---IQ 193 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~---~~ 193 (210)
.++++|||||||+|..++.+++. +.+|+++|+ +.+++.+++|+..++.. .++.+...+..+...... ..
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~----~~i~~~~gda~~~l~~~~~~~~~ 134 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQE----HKIKLRLGPALDTLHSLLNEGGE 134 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCT----TTEEEEESCHHHHHHHHHHHHCS
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----CcEEEEEcCHHHHHHHHhhccCC
Confidence 36789999999999999999984 569999999 89999999999988764 456666544322111000 03
Q ss_pred CCCcEEEE
Q 028335 194 PLPDYGNE 201 (210)
Q Consensus 194 ~~fD~Iia 201 (210)
.+||+|+.
T Consensus 135 ~~fD~V~~ 142 (242)
T 3r3h_A 135 HQFDFIFI 142 (242)
T ss_dssp SCEEEEEE
T ss_pred CCEeEEEE
Confidence 67998876
No 186
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.60 E-value=6e-08 Score=76.81 Aligned_cols=73 Identities=16% Similarity=0.111 Sum_probs=54.7
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||+|||+|..+..+++.+.+|+++|. +.+++.++++.. .+...+..+. ...+.+.+||+|+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~~------------~~~~~d~~~~-~~~~~~~~fD~v~ 98 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKLD------------HVVLGDIETM-DMPYEEEQFDCVI 98 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTSS------------EEEESCTTTC-CCCSCTTCEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCC------------cEEEcchhhc-CCCCCCCccCEEE
Confidence 6789999999999999999988889999999 889888876531 2233333221 1223456899999
Q ss_pred Ecceeee
Q 028335 201 ESLLLFL 207 (210)
Q Consensus 201 a~DviY~ 207 (210)
+.+++++
T Consensus 99 ~~~~l~~ 105 (230)
T 3cc8_A 99 FGDVLEH 105 (230)
T ss_dssp EESCGGG
T ss_pred ECChhhh
Confidence 9998864
No 187
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.60 E-value=1.2e-07 Score=81.30 Aligned_cols=73 Identities=18% Similarity=0.032 Sum_probs=56.8
Q ss_pred cCCCEEEEECCccCHHHHHHHHcC---CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLG---AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g---~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
.++.+|||+|||+|.+++.++..+ .+|+++|+ +.+++.+++|+..+++. ++.+...+..+. ....++|
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-----~i~~~~~D~~~~---~~~~~~~ 273 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-----WIRFLRADARHL---PRFFPEV 273 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-----TCEEEECCGGGG---GGTCCCC
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-----ceEEEeCChhhC---ccccCCC
Confidence 467799999999999999999865 68999999 99999999999988763 456666654332 1123457
Q ss_pred cEEEE
Q 028335 197 DYGNE 201 (210)
Q Consensus 197 D~Iia 201 (210)
|+|++
T Consensus 274 D~Ii~ 278 (354)
T 3tma_A 274 DRILA 278 (354)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 88876
No 188
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.60 E-value=2.5e-07 Score=79.74 Aligned_cols=77 Identities=12% Similarity=0.024 Sum_probs=62.9
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
+..+|||+|||+|..+..+++. +.+++++|++.+++.+++++...++. .++.+...+..+. ++. +||+|
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~----~~v~~~~~d~~~~----~p~-~~D~v 272 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLA----DRCEILPGDFFET----IPD-GADVY 272 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCT----TTEEEEECCTTTC----CCS-SCSEE
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcC----CceEEeccCCCCC----CCC-CceEE
Confidence 5679999999999999999886 45899999988999999999887654 5688888776522 222 79999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 273 ~~~~vlh~ 280 (369)
T 3gwz_A 273 LIKHVLHD 280 (369)
T ss_dssp EEESCGGG
T ss_pred Ehhhhhcc
Confidence 99999864
No 189
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.59 E-value=8.5e-08 Score=76.76 Aligned_cols=83 Identities=14% Similarity=0.089 Sum_probs=58.5
Q ss_pred cCCCEEEEECCccCHHHHHHHHc-C-------CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL-G-------AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL 191 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~-g-------~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~ 191 (210)
.++.+|||+|||+|..+..+++. + .+|+++|. +.+++.+++|+..++...-...++.+...+......
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--- 159 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP--- 159 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG---
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCC---
Confidence 46789999999999999999874 4 48999999 999999999998765100000245665555433211
Q ss_pred cCCCCcEEEEcceee
Q 028335 192 IQPLPDYGNESLLLF 206 (210)
Q Consensus 192 ~~~~fD~Iia~DviY 206 (210)
...+||+|++...+.
T Consensus 160 ~~~~fD~I~~~~~~~ 174 (227)
T 1r18_A 160 PNAPYNAIHVGAAAP 174 (227)
T ss_dssp GGCSEEEEEECSCBS
T ss_pred cCCCccEEEECCchH
Confidence 125899999876653
No 190
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.59 E-value=1.8e-07 Score=80.44 Aligned_cols=80 Identities=18% Similarity=0.141 Sum_probs=62.3
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
..++|||+|||+|..+..+++. +.+++++|++.+++.+++++...+.. .++.+...+..+... .++ .+||+|
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~-~~p-~~~D~v 252 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGS----ERIHGHGANLLDRDV-PFP-TGFDAV 252 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTG----GGEEEEECCCCSSSC-CCC-CCCSEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcc----cceEEEEccccccCC-CCC-CCcCEE
Confidence 5679999999999999999875 55899999998999999998776543 467777777544210 122 579999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 253 ~~~~vlh~ 260 (363)
T 3dp7_A 253 WMSQFLDC 260 (363)
T ss_dssp EEESCSTT
T ss_pred EEechhhh
Confidence 99999863
No 191
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.59 E-value=1.2e-07 Score=80.29 Aligned_cols=73 Identities=14% Similarity=0.010 Sum_probs=55.6
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
.++.+|||+|||+|..++.++.. +.+|+++|+ +.+++.+++|++.++.. ++.+...+..+. .....+|
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-----~v~~~~~D~~~~---~~~~~~f 188 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-----NVILFHSSSLHI---GELNVEF 188 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-----SEEEESSCGGGG---GGGCCCE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-----eEEEEECChhhc---ccccccC
Confidence 47789999999999999999875 358999999 99999999999988764 355444443221 1124579
Q ss_pred cEEEE
Q 028335 197 DYGNE 201 (210)
Q Consensus 197 D~Iia 201 (210)
|+|++
T Consensus 189 D~Il~ 193 (315)
T 1ixk_A 189 DKILL 193 (315)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 99987
No 192
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.59 E-value=2.2e-07 Score=78.62 Aligned_cols=77 Identities=17% Similarity=0.026 Sum_probs=61.9
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
+..+|||+|||+|..+..+++. +.+++++|++.+++.+++++...++. .++.+...+..+. ++. +||+|
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~----~p~-~~D~v 239 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLS----GRAQVVVGSFFDP----LPA-GAGGY 239 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCT----TTEEEEECCTTSC----CCC-SCSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcC----cCeEEecCCCCCC----CCC-CCcEE
Confidence 3579999999999999998875 45899999988999999999887654 5688887776422 122 79999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 240 ~~~~vlh~ 247 (332)
T 3i53_A 240 VLSAVLHD 247 (332)
T ss_dssp EEESCGGG
T ss_pred EEehhhcc
Confidence 99999864
No 193
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.59 E-value=3.8e-07 Score=77.45 Aligned_cols=81 Identities=20% Similarity=0.201 Sum_probs=55.6
Q ss_pred ccCCCEEEEECCccCHHHHHHHHc-C--CEEEEEeh-HHHHHHHHHHHHHh-------ccCCCCCCceEEEEeeCCCCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALL-G--AQVILTDL-PDRLRLLKKNIENN-------LRHGDLRGSAVVTELTWGDDPD 188 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~-g--~~Vv~tD~-~~~l~~~~~N~~~n-------~~~~~~~~~~~~~~l~w~~~~~ 188 (210)
..++.+|||+|||+|.+++.+++. | .+|+++|+ +.+++.+++|+... +.. ....++.+...+..+...
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~-~~~~~v~~~~~d~~~~~~ 181 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVE-EWPDNVDFIHKDISGATE 181 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSS-CCCCCEEEEESCTTCCC-
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccccccc-ccCCceEEEECChHHccc
Confidence 357889999999999999999986 5 58999999 99999999999853 221 001356666666543221
Q ss_pred CCccCCCCcEEEEc
Q 028335 189 QDLIQPLPDYGNES 202 (210)
Q Consensus 189 ~~~~~~~fD~Iia~ 202 (210)
.+.+.+||+|++.
T Consensus 182 -~~~~~~fD~V~~~ 194 (336)
T 2b25_A 182 -DIKSLTFDAVALD 194 (336)
T ss_dssp -------EEEEEEC
T ss_pred -ccCCCCeeEEEEC
Confidence 2234579999873
No 194
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.57 E-value=2.1e-07 Score=79.51 Aligned_cols=77 Identities=12% Similarity=0.098 Sum_probs=61.7
Q ss_pred CCCEEEEECCccCHHHHHHHHcC--CEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLG--AQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g--~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
++.+|||+|||+|.++..+++.. .+++++|++.+++.+++|+..++.. .++.+...++.+.. . ..||+|
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~----~-~~~D~v 253 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLS----DRVDVVEGDFFEPL----P-RKADAI 253 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCT----TTEEEEECCTTSCC----S-SCEEEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCC----CceEEEeCCCCCCC----C-CCccEE
Confidence 56799999999999999998764 4899999988999999999887654 46777777764321 1 249999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 254 ~~~~vl~~ 261 (360)
T 1tw3_A 254 ILSFVLLN 261 (360)
T ss_dssp EEESCGGG
T ss_pred EEcccccC
Confidence 99998864
No 195
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.55 E-value=1.8e-07 Score=79.74 Aligned_cols=79 Identities=16% Similarity=0.078 Sum_probs=62.7
Q ss_pred CCEEEEECCccCHHHHHHHHc--CCEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 123 GKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 123 ~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
+.+|||+|||+|..+..+++. +.+++++|++.+++.+++++...+.. .++.+...++.+... ....+||+|+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~~~--~~~~~~D~v~ 253 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLG----GRVEFFEKNLLDARN--FEGGAADVVM 253 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCG----GGEEEEECCTTCGGG--GTTCCEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCC----CceEEEeCCcccCcc--cCCCCccEEE
Confidence 789999999999999999876 45899999988999999999887654 467777777544321 1234699999
Q ss_pred Ecceeee
Q 028335 201 ESLLLFL 207 (210)
Q Consensus 201 a~DviY~ 207 (210)
+..++++
T Consensus 254 ~~~vlh~ 260 (352)
T 3mcz_A 254 LNDCLHY 260 (352)
T ss_dssp EESCGGG
T ss_pred Eeccccc
Confidence 9999864
No 196
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.53 E-value=3.7e-07 Score=78.13 Aligned_cols=78 Identities=15% Similarity=0.158 Sum_probs=62.0
Q ss_pred cCCCEEEEECCccCHHHHHHHHc--CCEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
.++.+|||+|||+|..+..+++. +.+++++|++.+++.+++|+..++.. +++.+...+..+. . -+.+|+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~---~--~~~~D~ 259 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVA----DRMRGIAVDIYKE---S--YPEADA 259 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCT----TTEEEEECCTTTS---C--CCCCSE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCC----CCEEEEeCccccC---C--CCCCCE
Confidence 35679999999999999999987 45899999988999999999887654 4577777765443 1 134599
Q ss_pred EEEcceeee
Q 028335 199 GNESLLLFL 207 (210)
Q Consensus 199 Iia~DviY~ 207 (210)
|++..++++
T Consensus 260 v~~~~vlh~ 268 (359)
T 1x19_A 260 VLFCRILYS 268 (359)
T ss_dssp EEEESCGGG
T ss_pred EEEechhcc
Confidence 999998864
No 197
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.53 E-value=1.6e-07 Score=83.01 Aligned_cols=83 Identities=23% Similarity=0.177 Sum_probs=56.7
Q ss_pred cCCCEEEEECCccCHHHHHHHHc-CC-EEEEEeh-HHHHHHH-------HHHHHHhccCCCCCCceEEEEee-CCCCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL-GA-QVILTDL-PDRLRLL-------KKNIENNLRHGDLRGSAVVTELT-WGDDPDQ 189 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~-g~-~Vv~tD~-~~~l~~~-------~~N~~~n~~~~~~~~~~~~~~l~-w~~~~~~ 189 (210)
.++.+|||||||+|.+++.+++. +. +|+++|+ +.+++.+ ++|+..+++.. .++.+...+ +......
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~---~nV~~i~gD~~~~~~~~ 317 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRL---NNVEFSLKKSFVDNNRV 317 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCC---CCEEEEESSCSTTCHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCC---CceEEEEcCcccccccc
Confidence 47789999999999999999985 54 7999999 8888888 88888776321 245554322 1110000
Q ss_pred CccCCCCcEEEEcceee
Q 028335 190 DLIQPLPDYGNESLLLF 206 (210)
Q Consensus 190 ~~~~~~fD~Iia~DviY 206 (210)
.....+||+|++..+++
T Consensus 318 ~~~~~~FDvIvvn~~l~ 334 (433)
T 1u2z_A 318 AELIPQCDVILVNNFLF 334 (433)
T ss_dssp HHHGGGCSEEEECCTTC
T ss_pred ccccCCCCEEEEeCccc
Confidence 00135799999876654
No 198
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.53 E-value=5.9e-08 Score=84.18 Aligned_cols=75 Identities=20% Similarity=-0.020 Sum_probs=56.8
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCC-ccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQD-LIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~-~~~~~fD~I 199 (210)
++++|||+|||+|.+++.+++.+.+|+++|+ +.+++.+++|+..|++. ++.+...+..+..... ....+||+|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~-----~~~~~~~d~~~~~~~~~~~~~~fD~I 283 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLG-----NVRVLEANAFDLLRRLEKEGERFDLV 283 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCT-----TEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCC-----CceEEECCHHHHHHHHHhcCCCeeEE
Confidence 6779999999999999999988668999999 99999999999999865 2555554432211100 013579999
Q ss_pred EE
Q 028335 200 NE 201 (210)
Q Consensus 200 ia 201 (210)
++
T Consensus 284 i~ 285 (382)
T 1wxx_A 284 VL 285 (382)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 199
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.53 E-value=1.8e-07 Score=78.54 Aligned_cols=78 Identities=10% Similarity=0.003 Sum_probs=54.4
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
+.++|||||||+|.++..+++. ..+|+++|+ +.+++.+++|+...+...-...++.+...|....... ...+||+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~fDv 160 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ--TSQTFDV 160 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C--CCCCEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh--cCCCccE
Confidence 5679999999999999999987 358999999 9999999999876531100013455555443322111 2468999
Q ss_pred EEE
Q 028335 199 GNE 201 (210)
Q Consensus 199 Iia 201 (210)
|++
T Consensus 161 Ii~ 163 (294)
T 3adn_A 161 IIS 163 (294)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 200
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.53 E-value=3.4e-07 Score=79.10 Aligned_cols=75 Identities=15% Similarity=0.092 Sum_probs=58.1
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC--EEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA--QVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~--~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
.++++|||+| |+|.+++.+++.+. +|+++|+ +.+++.+++|+..+++. ++.+...+..+.... ....+||
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-----~v~~~~~D~~~~l~~-~~~~~fD 243 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-----DIEIFTFDLRKPLPD-YALHKFD 243 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-----CEEEECCCTTSCCCT-TTSSCBS
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----CEEEEEChhhhhchh-hccCCcc
Confidence 4688999999 99999999998864 8999999 99999999999998753 466666665442111 0234799
Q ss_pred EEEEc
Q 028335 198 YGNES 202 (210)
Q Consensus 198 ~Iia~ 202 (210)
+|++.
T Consensus 244 ~Vi~~ 248 (373)
T 2qm3_A 244 TFITD 248 (373)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99974
No 201
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.51 E-value=7.8e-08 Score=83.59 Aligned_cols=45 Identities=31% Similarity=0.392 Sum_probs=42.0
Q ss_pred CCCEEEEECCccCHHHHHHHHc-C-CEEEEEeh-HHHHHHHHHHHHHh
Q 028335 122 HGKKIVELGSGCGLVGCIAALL-G-AQVILTDL-PDRLRLLKKNIENN 166 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~-g-~~Vv~tD~-~~~l~~~~~N~~~n 166 (210)
++.+|||+|||+|..++.+++. + .+|+++|+ +.+++.+++|++.|
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n 94 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLN 94 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh
Confidence 6889999999999999999986 4 48999999 99999999999999
No 202
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.50 E-value=8.9e-08 Score=79.43 Aligned_cols=44 Identities=18% Similarity=0.339 Sum_probs=36.4
Q ss_pred cCCCEEEEECCccCHHHHHHHHc-CCEEEEEeh-HHHHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIE 164 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~-g~~Vv~tD~-~~~l~~~~~N~~ 164 (210)
.++.+|||||||+|...+.+++. +.+|+++|+ +.+++.+++++.
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHh
Confidence 47789999999999966655543 679999999 999999988764
No 203
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.49 E-value=5.2e-07 Score=76.30 Aligned_cols=76 Identities=14% Similarity=0.055 Sum_probs=56.5
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
.++.+|||+|||+|..++.++.+ ..+|+++|+ +.+++.+++|++.+++. ++.+...+..+.........+|
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-----~v~~~~~D~~~~~~~~~~~~~f 175 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-----CCELAEEDFLAVSPSDPRYHEV 175 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEECCGGGSCTTCGGGTTE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----eEEEEeCChHhcCccccccCCC
Confidence 47889999999999999998874 358999999 99999999999998764 4666665543322110001468
Q ss_pred cEEEE
Q 028335 197 DYGNE 201 (210)
Q Consensus 197 D~Iia 201 (210)
|.|+.
T Consensus 176 D~Vl~ 180 (309)
T 2b9e_A 176 HYILL 180 (309)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 98885
No 204
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.49 E-value=3.4e-07 Score=79.72 Aligned_cols=74 Identities=14% Similarity=0.063 Sum_probs=57.5
Q ss_pred cCCCEEEEECCccCHHHHHHHHcC----------------------------------------CEEEEEeh-HHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLG----------------------------------------AQVILTDL-PDRLRLL 159 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g----------------------------------------~~Vv~tD~-~~~l~~~ 159 (210)
.++.+|||+|||+|.+.+.++..+ .+|+++|+ +.+++.+
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 367899999999999999988653 36999999 9999999
Q ss_pred HHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEEEc
Q 028335 160 KKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGNES 202 (210)
Q Consensus 160 ~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Iia~ 202 (210)
++|+..+++. ..+.+...+..+.. ...+||+||+.
T Consensus 274 r~Na~~~gl~----~~i~~~~~D~~~l~----~~~~~D~Iv~N 308 (385)
T 3ldu_A 274 RENAEIAGVD----EYIEFNVGDATQFK----SEDEFGFIITN 308 (385)
T ss_dssp HHHHHHHTCG----GGEEEEECCGGGCC----CSCBSCEEEEC
T ss_pred HHHHHHcCCC----CceEEEECChhhcC----cCCCCcEEEEC
Confidence 9999999875 35677766654332 12468888763
No 205
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.48 E-value=4e-07 Score=74.41 Aligned_cols=70 Identities=10% Similarity=-0.002 Sum_probs=53.0
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
++.+|||+|||+|.++..+++. +.+|+++|+ +.+++.++++. .++.+...++.+ ..+.+.+||+
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~---~~~~~~~fD~ 151 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----------PQVTFCVASSHR---LPFSDTSMDA 151 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTS---CSBCTTCEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcchhh---CCCCCCceeE
Confidence 6789999999999999999986 679999999 89999888763 124444555432 2234568999
Q ss_pred EEEcce
Q 028335 199 GNESLL 204 (210)
Q Consensus 199 Iia~Dv 204 (210)
|++.++
T Consensus 152 v~~~~~ 157 (269)
T 1p91_A 152 IIRIYA 157 (269)
T ss_dssp EEEESC
T ss_pred EEEeCC
Confidence 998654
No 206
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.48 E-value=2.7e-07 Score=78.05 Aligned_cols=75 Identities=15% Similarity=0.096 Sum_probs=60.9
Q ss_pred CEEEEECCccCHHHHHHHHc--CCEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEEE
Q 028335 124 KKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGNE 201 (210)
Q Consensus 124 ~~VLELGcGtGl~~l~la~~--g~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Iia 201 (210)
.+|||+|||+|..+..+++. +.+++++|++.+++.+++++..++.. .++.+...++.+. ++ .+||+|++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~----~~v~~~~~d~~~~----~~-~~~D~v~~ 239 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAG----ERVSLVGGDMLQE----VP-SNGDIYLL 239 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHT----TSEEEEESCTTTC----CC-SSCSEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCC----CcEEEecCCCCCC----CC-CCCCEEEE
Confidence 89999999999999999876 55899999988899999998877654 4577777776442 22 47999999
Q ss_pred cceeee
Q 028335 202 SLLLFL 207 (210)
Q Consensus 202 ~DviY~ 207 (210)
..++++
T Consensus 240 ~~vl~~ 245 (334)
T 2ip2_A 240 SRIIGD 245 (334)
T ss_dssp ESCGGG
T ss_pred chhccC
Confidence 999863
No 207
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.47 E-value=2.7e-07 Score=76.42 Aligned_cols=76 Identities=16% Similarity=0.091 Sum_probs=55.7
Q ss_pred cCCCEEEEECCccCHHHHHHHHc--C-CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCc--cCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL--G-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL--IQP 194 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~--g-~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~--~~~ 194 (210)
.++.+|||+|||+|..++.++.. + .+|+++|+ +.+++.+++|++.++.. ++.+...+..+... .+ ...
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-----~v~~~~~D~~~~~~-~~~~~~~ 155 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-----NTIIINADMRKYKD-YLLKNEI 155 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-----SEEEEESCHHHHHH-HHHHTTC
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-----cEEEEeCChHhcch-hhhhccc
Confidence 37889999999999999998874 4 68999999 99999999999988753 35555544221100 00 145
Q ss_pred CCcEEEEc
Q 028335 195 LPDYGNES 202 (210)
Q Consensus 195 ~fD~Iia~ 202 (210)
+||+|++.
T Consensus 156 ~fD~Vl~d 163 (274)
T 3ajd_A 156 FFDKILLD 163 (274)
T ss_dssp CEEEEEEE
T ss_pred cCCEEEEc
Confidence 79999863
No 208
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.46 E-value=8.1e-08 Score=83.86 Aligned_cols=75 Identities=13% Similarity=0.037 Sum_probs=54.4
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CC-EEEEEeh-HHHHHHHHHHHHHhccCCCCCCc-eEEEEeeCCCCCCCCccCCCC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GA-QVILTDL-PDRLRLLKKNIENNLRHGDLRGS-AVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~-~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~-~~~~~l~w~~~~~~~~~~~~f 196 (210)
++.+|||++||+|.+|+.+++. |+ +|+++|+ +.+++.+++|++.|++. ++ +.+...|-.+..... ...+|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~----~~~v~v~~~Da~~~l~~~-~~~~f 126 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP----EDRYEIHGMEANFFLRKE-WGFGF 126 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC----GGGEEEECSCHHHHHHSC-CSSCE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC----CceEEEEeCCHHHHHHHh-hCCCC
Confidence 5789999999999999999984 54 7999999 99999999999999875 23 444433311100000 13468
Q ss_pred cEEEE
Q 028335 197 DYGNE 201 (210)
Q Consensus 197 D~Iia 201 (210)
|+|+.
T Consensus 127 D~V~l 131 (392)
T 3axs_A 127 DYVDL 131 (392)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 98884
No 209
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.46 E-value=4.4e-07 Score=79.21 Aligned_cols=74 Identities=16% Similarity=0.112 Sum_probs=57.0
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC----------------------------------------EEEEEeh-HHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA----------------------------------------QVILTDL-PDRLRLL 159 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~----------------------------------------~Vv~tD~-~~~l~~~ 159 (210)
.++..|||.+||+|.+.+.++..+. +|+++|+ +.+++.+
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 3677899999999999999887533 4999999 9999999
Q ss_pred HHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEEEc
Q 028335 160 KKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGNES 202 (210)
Q Consensus 160 ~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Iia~ 202 (210)
++|+..+++. +.+.+...+..+.. ...+||+||+.
T Consensus 280 r~Na~~~gl~----~~I~~~~~D~~~~~----~~~~fD~Iv~N 314 (393)
T 3k0b_A 280 KQNAVEAGLG----DLITFRQLQVADFQ----TEDEYGVVVAN 314 (393)
T ss_dssp HHHHHHTTCT----TCSEEEECCGGGCC----CCCCSCEEEEC
T ss_pred HHHHHHcCCC----CceEEEECChHhCC----CCCCCCEEEEC
Confidence 9999999875 34666666654322 12468888764
No 210
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.42 E-value=6.1e-07 Score=78.70 Aligned_cols=81 Identities=11% Similarity=0.008 Sum_probs=56.2
Q ss_pred ccCCCEEEEECCccCHHHHHHHHc-CC-EEEEEeh-HHHHHHHHHHHH-------HhccCCCCCCceEEEEeeCCCCCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALL-GA-QVILTDL-PDRLRLLKKNIE-------NNLRHGDLRGSAVVTELTWGDDPDQ 189 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~-g~-~Vv~tD~-~~~l~~~~~N~~-------~n~~~~~~~~~~~~~~l~w~~~~~~ 189 (210)
+.++.+|||||||+|.+.+.+++. ++ +|+|+|+ +.+++.+++|++ .+++. ..++.+..-+.. +.
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~---~~rVefi~GD~~---~l 244 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK---HAEYTLERGDFL---SE 244 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC---CCEEEEEECCTT---SH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC---CCCeEEEECccc---CC
Confidence 347889999999999999998864 66 5999999 899999998764 23331 134555555532 22
Q ss_pred CccC--CCCcEEEEcceee
Q 028335 190 DLIQ--PLPDYGNESLLLF 206 (210)
Q Consensus 190 ~~~~--~~fD~Iia~DviY 206 (210)
.+.+ ..||+|++..++|
T Consensus 245 p~~d~~~~aDVVf~Nn~~F 263 (438)
T 3uwp_A 245 EWRERIANTSVIFVNNFAF 263 (438)
T ss_dssp HHHHHHHTCSEEEECCTTC
T ss_pred ccccccCCccEEEEccccc
Confidence 2211 3689999866544
No 211
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.42 E-value=2e-07 Score=77.56 Aligned_cols=43 Identities=21% Similarity=0.321 Sum_probs=39.7
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIE 164 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~ 164 (210)
.++ +|||+|||+|.++..+++.+.+|+++|+ +.+++.+++|+.
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~ 89 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS 89 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT
T ss_pred CCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC
Confidence 356 9999999999999999999999999999 999999999875
No 212
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.41 E-value=4.2e-07 Score=74.11 Aligned_cols=44 Identities=16% Similarity=0.124 Sum_probs=40.6
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIE 164 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~ 164 (210)
.++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++|+.
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~ 73 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLV 73 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTT
T ss_pred CCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhc
Confidence 46789999999999999999998999999999 999999999875
No 213
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.41 E-value=9.3e-07 Score=71.84 Aligned_cols=98 Identities=11% Similarity=0.024 Sum_probs=59.0
Q ss_pred EEEeccHH-HHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc-C--CEEEEEeh-HHHHHHHHHHHHHhccCCC
Q 028335 97 SVMWDSGV-VLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL-G--AQVILTDL-PDRLRLLKKNIENNLRHGD 171 (210)
Q Consensus 97 ~~~W~aa~-~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~-g--~~Vv~tD~-~~~l~~~~~N~~~n~~~~~ 171 (210)
++.|..-. .++..+...++ ...+.++.+|||||||+|..+..++.. + .+|+++|. +.+++.+.+.+...
T Consensus 51 yr~w~~~~skla~~ll~~l~-~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r----- 124 (232)
T 3id6_C 51 YREWNAFRSKLAGAILKGLK-TNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR----- 124 (232)
T ss_dssp EEECCTTTCHHHHHHHTTCS-CCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-----
T ss_pred hhhhchHHHHHHHHHHhhhh-hcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-----
Confidence 56665422 24455544322 122457899999999999999999875 3 48999999 88876555544332
Q ss_pred CCCceEEEEeeCCCCCCCCccCCCCcEEEEc
Q 028335 172 LRGSAVVTELTWGDDPDQDLIQPLPDYGNES 202 (210)
Q Consensus 172 ~~~~~~~~~l~w~~~~~~~~~~~~fD~Iia~ 202 (210)
.++.+...|-...........+||+|++.
T Consensus 125 --~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 125 --PNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp --TTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred --CCeEEEEcccccchhhhccccceEEEEec
Confidence 13555444432211111123579998853
No 214
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.41 E-value=8.4e-07 Score=77.21 Aligned_cols=74 Identities=15% Similarity=0.141 Sum_probs=56.3
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCC----------------------------------------EEEEEeh-HHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGA----------------------------------------QVILTDL-PDRLRLL 159 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~----------------------------------------~Vv~tD~-~~~l~~~ 159 (210)
.++..+||.+||+|.+.+.++..+. +|+++|+ +.+++.+
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 3677999999999999999886533 4999999 9999999
Q ss_pred HHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEEEc
Q 028335 160 KKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGNES 202 (210)
Q Consensus 160 ~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Iia~ 202 (210)
++|+..+++. +.+.+...+..+... ..+||+||+.
T Consensus 273 r~Na~~~gl~----~~I~~~~~D~~~l~~----~~~fD~Iv~N 307 (384)
T 3ldg_A 273 RKNAREVGLE----DVVKLKQMRLQDFKT----NKINGVLISN 307 (384)
T ss_dssp HHHHHHTTCT----TTEEEEECCGGGCCC----CCCSCEEEEC
T ss_pred HHHHHHcCCC----CceEEEECChHHCCc----cCCcCEEEEC
Confidence 9999999875 456666665443221 2367777753
No 215
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.39 E-value=2.7e-07 Score=76.70 Aligned_cols=78 Identities=13% Similarity=0.229 Sum_probs=50.9
Q ss_pred CCCEEEEECCccCHHHHHHH----Hc--CCEE--EEEeh-HHHHHHHHHHHHHh-ccCCCCCCceEEEEeeCCCCCCCC-
Q 028335 122 HGKKIVELGSGCGLVGCIAA----LL--GAQV--ILTDL-PDRLRLLKKNIENN-LRHGDLRGSAVVTELTWGDDPDQD- 190 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la----~~--g~~V--v~tD~-~~~l~~~~~N~~~n-~~~~~~~~~~~~~~l~w~~~~~~~- 190 (210)
++.+|||+|||+|.++..++ .. +.+| +++|. +.|++.+++++... +.. ++.+. |.......
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~-----~v~~~---~~~~~~~~~ 123 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLE-----NVKFA---WHKETSSEY 123 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCT-----TEEEE---EECSCHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCC-----cceEE---EEecchhhh
Confidence 45699999999997665332 22 3444 99999 99999999987643 221 23322 21211101
Q ss_pred -------ccCCCCcEEEEcceeee
Q 028335 191 -------LIQPLPDYGNESLLLFL 207 (210)
Q Consensus 191 -------~~~~~fD~Iia~DviY~ 207 (210)
+.+.+||+|++..++++
T Consensus 124 ~~~~~~~~~~~~fD~V~~~~~l~~ 147 (292)
T 2aot_A 124 QSRMLEKKELQKWDFIHMIQMLYY 147 (292)
T ss_dssp HHHHHTTTCCCCEEEEEEESCGGG
T ss_pred hhhhccccCCCceeEEEEeeeeee
Confidence 23568999999999886
No 216
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.39 E-value=6.4e-07 Score=80.14 Aligned_cols=73 Identities=10% Similarity=0.080 Sum_probs=55.3
Q ss_pred CCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 122 HGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
++.+|||+|||+|..++.++.. +.+|+++|+ +.+++.+++|++.++.. ++.+...+..... .....+||
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-----nv~~~~~D~~~~~--~~~~~~fD 189 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-----NVALTHFDGRVFG--AAVPEMFD 189 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-----SEEEECCCSTTHH--HHSTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-----cEEEEeCCHHHhh--hhccccCC
Confidence 6789999999999999999875 358999999 99999999999998764 3555444432210 00235799
Q ss_pred EEEE
Q 028335 198 YGNE 201 (210)
Q Consensus 198 ~Iia 201 (210)
.|++
T Consensus 190 ~Il~ 193 (479)
T 2frx_A 190 AILL 193 (479)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 217
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.37 E-value=2.8e-07 Score=81.97 Aligned_cols=86 Identities=20% Similarity=0.190 Sum_probs=60.9
Q ss_pred ccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCce
Q 028335 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSA 176 (210)
Q Consensus 101 ~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~ 176 (210)
.++.+++..|. ..++.+|||+|||+|..++.++.+ +.+|+++|+ +.+++.+++|++.++.. ++
T Consensus 92 ~ss~l~~~~L~--------~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-----nv 158 (456)
T 3m4x_A 92 PSAMIVGTAAA--------AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-----NA 158 (456)
T ss_dssp TTTHHHHHHHC--------CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-----SE
T ss_pred HHHHHHHHHcC--------CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-----ce
Confidence 34555565554 237889999999999999998865 358999999 99999999999999864 34
Q ss_pred EEEEeeCCCCCCCCccCCCCcEEEE
Q 028335 177 VVTELTWGDDPDQDLIQPLPDYGNE 201 (210)
Q Consensus 177 ~~~~l~w~~~~~~~~~~~~fD~Iia 201 (210)
.+...+..... .....+||+|++
T Consensus 159 ~v~~~Da~~l~--~~~~~~FD~Il~ 181 (456)
T 3m4x_A 159 IVTNHAPAELV--PHFSGFFDRIVV 181 (456)
T ss_dssp EEECCCHHHHH--HHHTTCEEEEEE
T ss_pred EEEeCCHHHhh--hhccccCCEEEE
Confidence 44433311110 012357999986
No 218
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.36 E-value=1.7e-07 Score=78.04 Aligned_cols=81 Identities=11% Similarity=0.019 Sum_probs=55.2
Q ss_pred CCCEEEEECCccCH----HHHHHHHc-C-----CEEEEEeh-HHHHHHHHHHHHHh----c-------------------
Q 028335 122 HGKKIVELGSGCGL----VGCIAALL-G-----AQVILTDL-PDRLRLLKKNIENN----L------------------- 167 (210)
Q Consensus 122 ~~~~VLELGcGtGl----~~l~la~~-g-----~~Vv~tD~-~~~l~~~~~N~~~n----~------------------- 167 (210)
+..+|||+|||||. +++.++.. + .+|+|||+ +.||+.|++++-.. +
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 34689999999998 66667654 3 48999999 99999999985210 0
Q ss_pred -cCC--CCCCceEEEEeeCCCCCCCCcc-CCCCcEEEEccee
Q 028335 168 -RHG--DLRGSAVVTELTWGDDPDQDLI-QPLPDYGNESLLL 205 (210)
Q Consensus 168 -~~~--~~~~~~~~~~l~w~~~~~~~~~-~~~fD~Iia~Dvi 205 (210)
..+ ....++.+...++.+. .+. ..+||+|+|..|+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~---~~~~~~~fDlI~crnvl 223 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK---QYNVPGPFDAIFCRNVM 223 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS---SCCCCCCEEEEEECSSG
T ss_pred ceeechhhcccCeEEecccCCC---CCCcCCCeeEEEECCch
Confidence 000 0013577777776552 111 3579999999875
No 219
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.36 E-value=5.5e-07 Score=73.02 Aligned_cols=71 Identities=20% Similarity=0.027 Sum_probs=49.7
Q ss_pred CCCEEEEECCccCHHHHHHHHc------CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCC-CCccC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL------GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-QDLIQ 193 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~------g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~-~~~~~ 193 (210)
++.+|||||||+|..++.+++. +.+|+++|+ +.+++.++ +.. .++.+...+..+... .....
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~----~~v~~~~gD~~~~~~l~~~~~ 150 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDM----ENITLHQGDCSDLTTFEHLRE 150 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGC----TTEEEEECCSSCSGGGGGGSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccC----CceEEEECcchhHHHHHhhcc
Confidence 5679999999999999999986 579999999 88877766 111 356666666543200 11122
Q ss_pred CCCcEEEEc
Q 028335 194 PLPDYGNES 202 (210)
Q Consensus 194 ~~fD~Iia~ 202 (210)
.+||+|+..
T Consensus 151 ~~fD~I~~d 159 (236)
T 2bm8_A 151 MAHPLIFID 159 (236)
T ss_dssp SCSSEEEEE
T ss_pred CCCCEEEEC
Confidence 379998853
No 220
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.36 E-value=2e-06 Score=76.15 Aligned_cols=75 Identities=16% Similarity=0.068 Sum_probs=56.8
Q ss_pred cCCCEEEEECCccCHHHHHHHHc--C-CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL--G-AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~--g-~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
.++.+|||+|||+|..++.++.. + .+|+++|+ +.+++.+++|+..++.. ++.+...+..... ..+.+.+|
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-----~v~~~~~D~~~~~-~~~~~~~f 331 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-----IVKPLVKDARKAP-EIIGEEVA 331 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-----SEEEECSCTTCCS-SSSCSSCE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-----cEEEEEcChhhcc-hhhccCCC
Confidence 36789999999999999999875 3 58999999 99999999999988763 3555555543321 11233579
Q ss_pred cEEEE
Q 028335 197 DYGNE 201 (210)
Q Consensus 197 D~Iia 201 (210)
|+|++
T Consensus 332 D~Vl~ 336 (450)
T 2yxl_A 332 DKVLL 336 (450)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 99995
No 221
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.35 E-value=2.3e-07 Score=74.82 Aligned_cols=58 Identities=16% Similarity=0.048 Sum_probs=42.9
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HH-HHHHH---HHHHHHhccCCCCCCceEEEEeeCC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PD-RLRLL---KKNIENNLRHGDLRGSAVVTELTWG 184 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~-~l~~~---~~N~~~n~~~~~~~~~~~~~~l~w~ 184 (210)
++.+|||||||+|.+++.+++. +.+|+++|+ +. +++.+ ++++..++.. ++.+...+..
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-----~v~~~~~d~~ 88 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-----NVVFVIAAAE 88 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-----SEEEECCBTT
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-----CeEEEEcCHH
Confidence 6779999999999999999954 568999999 45 55555 7777666543 4555555543
No 222
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.34 E-value=4.1e-07 Score=77.76 Aligned_cols=76 Identities=13% Similarity=-0.084 Sum_probs=55.1
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHh--ccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENN--LRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n--~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
+.++|||||||+|.++..+++. ..+|+++|+ +.+++.+++|+... +.. ..++.+...++.+... .....+|
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~---~~rv~~~~~D~~~~l~-~~~~~~f 195 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYE---DPRVNLVIGDGVAFLK-NAAEGSY 195 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG---STTEEEEESCHHHHHH-TSCTTCE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC---CCcEEEEECCHHHHHH-hccCCCc
Confidence 5679999999999999999987 458999999 99999999998753 321 1356666555322110 1123579
Q ss_pred cEEEE
Q 028335 197 DYGNE 201 (210)
Q Consensus 197 D~Iia 201 (210)
|+|++
T Consensus 196 DlIi~ 200 (334)
T 1xj5_A 196 DAVIV 200 (334)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99997
No 223
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.34 E-value=3.3e-07 Score=74.33 Aligned_cols=59 Identities=25% Similarity=0.301 Sum_probs=45.8
Q ss_pred ccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHH
Q 028335 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 101 ~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~ 163 (210)
.++..+.+.|.... ...++++|||||||+|.++..+++.|+ +|+++|+ +.|++.+++|.
T Consensus 20 rg~~kL~~~L~~~~----~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~ 80 (232)
T 3opn_A 20 RGGLKLEKALKEFH----LEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSD 80 (232)
T ss_dssp TTHHHHHHHHHHTT----CCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTC
T ss_pred CcHHHHHHHHHHcC----CCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhC
Confidence 44566666666431 134678999999999999999999886 8999999 88988776653
No 224
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.33 E-value=4.7e-07 Score=75.97 Aligned_cols=75 Identities=13% Similarity=-0.034 Sum_probs=53.6
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHH--hccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIEN--NLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~--n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
++++|||||||+|.++..+++. ..+|+++|+ +.+++.+++|+.. ++.. ..++.+...+...... ....+|
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~---~~~v~~~~~D~~~~l~--~~~~~f 164 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFD---DPRAEIVIANGAEYVR--KFKNEF 164 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGG---CTTEEEEESCHHHHGG--GCSSCE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccC---CCceEEEECcHHHHHh--hCCCCc
Confidence 5679999999999999999987 358999999 9999999999865 2321 1345555544211111 123579
Q ss_pred cEEEE
Q 028335 197 DYGNE 201 (210)
Q Consensus 197 D~Iia 201 (210)
|+|++
T Consensus 165 D~Ii~ 169 (296)
T 1inl_A 165 DVIII 169 (296)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 99996
No 225
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.33 E-value=2.3e-07 Score=78.80 Aligned_cols=75 Identities=11% Similarity=-0.048 Sum_probs=54.3
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHH--hccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIEN--NLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~--n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
++++|||||||+|.++..+++. +.+|+++|+ +.+++.+++|+.. ++.. ..++.+...++.+... ....+|
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~---~~~v~~~~~D~~~~l~--~~~~~f 190 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYE---DKRVNVFIEDASKFLE--NVTNTY 190 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG---STTEEEEESCHHHHHH--HCCSCE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC---CCcEEEEEccHHHHHh--hcCCCc
Confidence 5679999999999999999987 468999999 9999999999865 3321 1346665554322110 123579
Q ss_pred cEEEE
Q 028335 197 DYGNE 201 (210)
Q Consensus 197 D~Iia 201 (210)
|+|++
T Consensus 191 DvIi~ 195 (321)
T 2pt6_A 191 DVIIV 195 (321)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 99996
No 226
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.32 E-value=1.1e-07 Score=82.87 Aligned_cols=75 Identities=11% Similarity=-0.045 Sum_probs=53.1
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCC--CCCCccCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDD--PDQDLIQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~--~~~~~~~~~fD 197 (210)
.++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.++++ +.. . ....+... ....+.+.+||
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~----~~~------~--~~~~~~~~~~~~l~~~~~~fD 173 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK----GIR------V--RTDFFEKATADDVRRTEGPAN 173 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT----TCC------E--ECSCCSHHHHHHHHHHHCCEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc----CCC------c--ceeeechhhHhhcccCCCCEE
Confidence 36789999999999999999999999999999 8999888876 221 0 00000000 00012346899
Q ss_pred EEEEcceeee
Q 028335 198 YGNESLLLFL 207 (210)
Q Consensus 198 ~Iia~DviY~ 207 (210)
+|++..++++
T Consensus 174 ~I~~~~vl~h 183 (416)
T 4e2x_A 174 VIYAANTLCH 183 (416)
T ss_dssp EEEEESCGGG
T ss_pred EEEECChHHh
Confidence 9999998764
No 227
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.32 E-value=4.9e-07 Score=71.59 Aligned_cols=63 Identities=14% Similarity=0.113 Sum_probs=45.3
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++.+|||+|||+|.++..+++. +.+|+++|+ +.+++.+.+++..+..... ..++.+...+..+
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~-~~~v~~~~~d~~~ 92 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGG-LPNLLYLWATAER 92 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC-CTTEEEEECCSTT
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC-CCceEEEecchhh
Confidence 6789999999999999999987 568999999 8888865555443221100 1256776666544
No 228
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.30 E-value=8.2e-07 Score=70.51 Aligned_cols=67 Identities=16% Similarity=0.077 Sum_probs=50.6
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||+|||+|..+..+++. +++|+ +.+++.++++ + +.+...+.... .+...+||+|+
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~----~--------~~~~~~d~~~~---~~~~~~fD~v~ 107 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR----G--------VFVLKGTAENL---PLKDESFDFAL 107 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT----T--------CEEEECBTTBC---CSCTTCEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc----C--------CEEEEcccccC---CCCCCCeeEEE
Confidence 4789999999999999888765 99999 8999988887 1 33444443221 23346899999
Q ss_pred Ecceeee
Q 028335 201 ESLLLFL 207 (210)
Q Consensus 201 a~DviY~ 207 (210)
+.++++.
T Consensus 108 ~~~~l~~ 114 (219)
T 1vlm_A 108 MVTTICF 114 (219)
T ss_dssp EESCGGG
T ss_pred EcchHhh
Confidence 9998764
No 229
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.29 E-value=5.5e-07 Score=75.91 Aligned_cols=74 Identities=15% Similarity=0.071 Sum_probs=54.7
Q ss_pred cCCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCcc---CC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLI---QP 194 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~---~~ 194 (210)
.++.+|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++ . ++.+...++.+... .+. ..
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-~-----~v~~v~~d~~~l~~-~l~~~g~~ 97 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-D-----RVSLFKVSYREADF-LLKTLGIE 97 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-T-----TEEEEECCGGGHHH-HHHHTTCS
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-C-----cEEEEECCHHHHHH-HHHhcCCC
Confidence 36789999999999999999976 469999999 999999999988765 2 46666655433210 011 14
Q ss_pred CCcEEEE
Q 028335 195 LPDYGNE 201 (210)
Q Consensus 195 ~fD~Iia 201 (210)
+||.|++
T Consensus 98 ~~D~Vl~ 104 (301)
T 1m6y_A 98 KVDGILM 104 (301)
T ss_dssp CEEEEEE
T ss_pred CCCEEEE
Confidence 6888874
No 230
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.28 E-value=8.3e-07 Score=73.68 Aligned_cols=78 Identities=13% Similarity=-0.105 Sum_probs=55.2
Q ss_pred CCCEEEEECCccCHHHHHHHHc-C-CEEEEEeh-HHHHHHHHHHHHHh--ccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL-G-AQVILTDL-PDRLRLLKKNIENN--LRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~-g-~~Vv~tD~-~~~l~~~~~N~~~n--~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
+.++|||||||+|.++..+++. + .+|+++|+ +.+++.+++|+... +.. ..++.+..-+...... ....+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~---~~rv~v~~~D~~~~l~--~~~~~f 149 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLD---DPRVDVQVDDGFMHIA--KSENQY 149 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTT---STTEEEEESCSHHHHH--TCCSCE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccC---CCceEEEECcHHHHHh--hCCCCe
Confidence 5689999999999999999987 4 58999999 99999999998642 221 1345555544211100 124579
Q ss_pred cEEEEccee
Q 028335 197 DYGNESLLL 205 (210)
Q Consensus 197 D~Iia~Dvi 205 (210)
|+|++ |..
T Consensus 150 D~Ii~-d~~ 157 (275)
T 1iy9_A 150 DVIMV-DST 157 (275)
T ss_dssp EEEEE-SCS
T ss_pred eEEEE-CCC
Confidence 99997 543
No 231
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.28 E-value=5.8e-07 Score=75.77 Aligned_cols=75 Identities=15% Similarity=-0.019 Sum_probs=53.6
Q ss_pred CCCEEEEECCccCHHHHHHHHcC--CEEEEEeh-HHHHHHHHHHHHH--hccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 122 HGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIEN--NLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g--~~Vv~tD~-~~~l~~~~~N~~~--n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
++++|||||||+|.++..+++.. .+|+++|+ +.+++.+++|+.. ++.. ..++.+...+..+... ....+|
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~---~~rv~v~~~Da~~~l~--~~~~~f 169 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYS---SSKLTLHVGDGFEFMK--QNQDAF 169 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG---CTTEEEEESCHHHHHH--TCSSCE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccC---CCcEEEEECcHHHHHh--hCCCCc
Confidence 56899999999999999999874 58999999 9999999999865 3331 1345555443211000 124579
Q ss_pred cEEEE
Q 028335 197 DYGNE 201 (210)
Q Consensus 197 D~Iia 201 (210)
|+|++
T Consensus 170 D~Ii~ 174 (304)
T 2o07_A 170 DVIIT 174 (304)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 99996
No 232
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.28 E-value=5.5e-07 Score=80.22 Aligned_cols=84 Identities=17% Similarity=0.104 Sum_probs=59.0
Q ss_pred cHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceE
Q 028335 102 SGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAV 177 (210)
Q Consensus 102 aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~ 177 (210)
++..++.++. ..++.+|||+|||+|..++.++.+ ..+|+++|+ +.+++.+++|++.++.. +.
T Consensus 89 ss~l~a~~L~--------~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~------v~ 154 (464)
T 3m6w_A 89 SAQAVGVLLD--------PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP------LA 154 (464)
T ss_dssp TTHHHHHHHC--------CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC------CE
T ss_pred HHHHHHHhcC--------cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe------EE
Confidence 4555555553 237889999999999999999865 258999999 99999999999998753 33
Q ss_pred EEEeeCCCCCCCCccCCCCcEEEE
Q 028335 178 VTELTWGDDPDQDLIQPLPDYGNE 201 (210)
Q Consensus 178 ~~~l~w~~~~~~~~~~~~fD~Iia 201 (210)
+...+..+.. .....+||+|++
T Consensus 155 ~~~~Da~~l~--~~~~~~FD~Il~ 176 (464)
T 3m6w_A 155 VTQAPPRALA--EAFGTYFHRVLL 176 (464)
T ss_dssp EECSCHHHHH--HHHCSCEEEEEE
T ss_pred EEECCHHHhh--hhccccCCEEEE
Confidence 3332211110 012457999984
No 233
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.27 E-value=2.6e-06 Score=70.96 Aligned_cols=43 Identities=23% Similarity=0.330 Sum_probs=39.2
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCE----EEEEeh-HHHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQ----VILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~----Vv~tD~-~~~l~~~~~N~ 163 (210)
.++.+|||+|||+|.++..+++.+.+ |+++|+ +.+++.+++|.
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~ 88 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF 88 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc
Confidence 46789999999999999999988777 999999 99999999993
No 234
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.26 E-value=8.5e-07 Score=73.18 Aligned_cols=44 Identities=20% Similarity=0.319 Sum_probs=39.2
Q ss_pred CC--CEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHH
Q 028335 122 HG--KKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIEN 165 (210)
Q Consensus 122 ~~--~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~ 165 (210)
++ .+|||+|||+|..++.++.+|++|+++|. +.+..++++|++.
T Consensus 86 ~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~ 132 (258)
T 2oyr_A 86 GDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLAR 132 (258)
T ss_dssp TTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH
Confidence 45 79999999999999999999999999999 8888888888754
No 235
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.26 E-value=1.7e-06 Score=76.19 Aligned_cols=74 Identities=20% Similarity=0.052 Sum_probs=56.0
Q ss_pred cCCCEEEEECCccCHHHHHHHHcC--CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLG--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g--~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
.++.+|||+|||+|..++.++... .+|+++|+ +.+++.+++|+..++.. +.+...+..+.. ..+...+||
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~------~~~~~~D~~~~~-~~~~~~~fD 317 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK------ATVKQGDGRYPS-QWCGEQQFD 317 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCC------CEEEECCTTCTH-HHHTTCCEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCC------eEEEeCchhhch-hhcccCCCC
Confidence 378899999999999999999864 58999999 89999999999988753 344444433221 112335799
Q ss_pred EEEE
Q 028335 198 YGNE 201 (210)
Q Consensus 198 ~Iia 201 (210)
+|++
T Consensus 318 ~Vl~ 321 (429)
T 1sqg_A 318 RILL 321 (429)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9985
No 236
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.24 E-value=9e-07 Score=74.47 Aligned_cols=76 Identities=13% Similarity=-0.060 Sum_probs=53.7
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHH-h-ccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIEN-N-LRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~-n-~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
++++|||||||+|.++..+++. ..+|+++|+ +.+++.+++++.. + ... ..++.+...+..+... .....+|
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~---~~~v~~~~~D~~~~~~-~~~~~~f 170 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLA---DPRATVRVGDGLAFVR-QTPDNTY 170 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG---CTTEEEEESCHHHHHH-SSCTTCE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccC---CCcEEEEECcHHHHHH-hccCCce
Confidence 5679999999999999999976 358999999 9999999998743 1 111 1346655554322110 0024579
Q ss_pred cEEEE
Q 028335 197 DYGNE 201 (210)
Q Consensus 197 D~Iia 201 (210)
|+|++
T Consensus 171 DvIi~ 175 (304)
T 3bwc_A 171 DVVII 175 (304)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 99998
No 237
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.23 E-value=1.9e-06 Score=73.49 Aligned_cols=73 Identities=10% Similarity=-0.065 Sum_probs=54.3
Q ss_pred CCCEEEEECCccCHHHHHHHHcC-------CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccC
Q 028335 122 HGKKIVELGSGCGLVGCIAALLG-------AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQ 193 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g-------~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~ 193 (210)
++.+|||+|||+|.+.+.+++.. .+++++|+ +.+++.++.|+..++.. +.+...+.... ...
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~------~~i~~~D~l~~----~~~ 199 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQK------MTLLHQDGLAN----LLV 199 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCC------CEEEESCTTSC----CCC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCC------ceEEECCCCCc----ccc
Confidence 45799999999999999888652 57999999 99999999999887652 33444443221 124
Q ss_pred CCCcEEEEcce
Q 028335 194 PLPDYGNESLL 204 (210)
Q Consensus 194 ~~fD~Iia~Dv 204 (210)
.+||+|++.-.
T Consensus 200 ~~fD~Ii~NPP 210 (344)
T 2f8l_A 200 DPVDVVISDLP 210 (344)
T ss_dssp CCEEEEEEECC
T ss_pred CCccEEEECCC
Confidence 57898888654
No 238
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.22 E-value=6.2e-07 Score=74.58 Aligned_cols=42 Identities=21% Similarity=0.283 Sum_probs=38.4
Q ss_pred CCCEEEEECCccCHHHHHHHHcC-CEEEEEeh-HHHHHHHHHHH
Q 028335 122 HGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g-~~Vv~tD~-~~~l~~~~~N~ 163 (210)
++++|||||||+|.++..+++.+ .+|+++|+ +.+++.+++|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~ 118 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI 118 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 56899999999999999999874 48999999 99999999998
No 239
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.21 E-value=5.3e-07 Score=76.40 Aligned_cols=75 Identities=11% Similarity=-0.118 Sum_probs=52.7
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHh--ccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENN--LRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n--~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
+.++|||||||+|.++..+++. ..+|+++|+ +.+++.+++|+... +.. ..++.+...+...... ....+|
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~---~~rv~~~~~D~~~~l~--~~~~~f 182 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFS---HPKLDLFCGDGFEFLK--NHKNEF 182 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGG---CTTEEEECSCHHHHHH--HCTTCE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccC---CCCEEEEEChHHHHHH--hcCCCc
Confidence 5679999999999999999976 358999999 99999999998643 221 1345544433211100 124579
Q ss_pred cEEEE
Q 028335 197 DYGNE 201 (210)
Q Consensus 197 D~Iia 201 (210)
|+|++
T Consensus 183 D~Ii~ 187 (314)
T 2b2c_A 183 DVIIT 187 (314)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 99996
No 240
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.20 E-value=1.2e-06 Score=74.64 Aligned_cols=74 Identities=16% Similarity=0.120 Sum_probs=52.7
Q ss_pred CCCEEEEECCccCHHHHHHHHcC--CEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLG--AQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g--~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
++.+|||+|||+|..+..+++.. .+++++|.+.++. +.++...+.. .++.+...+..+. + |+||+|
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~--~~~~~~~~~~----~~v~~~~~d~~~~----~--p~~D~v 251 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVA--RHRLDAPDVA----GRWKVVEGDFLRE----V--PHADVH 251 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHT--TCCCCCGGGT----TSEEEEECCTTTC----C--CCCSEE
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhh--cccccccCCC----CCeEEEecCCCCC----C--CCCcEE
Confidence 56799999999999999998763 4799999966654 3333222322 4577777775421 1 289999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 252 ~~~~vlh~ 259 (348)
T 3lst_A 252 VLKRILHN 259 (348)
T ss_dssp EEESCGGG
T ss_pred EEehhccC
Confidence 99999874
No 241
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.19 E-value=3.2e-06 Score=69.24 Aligned_cols=42 Identities=21% Similarity=0.328 Sum_probs=38.4
Q ss_pred cCCCEEEEECCccCHHHHHHHHcC-CEEEEEeh-HHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKN 162 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g-~~Vv~tD~-~~~l~~~~~N 162 (210)
.++.+|||+|||+|.++..+++.+ .+|+++|+ +.+++.+++|
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~ 73 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI 73 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS
T ss_pred CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc
Confidence 367899999999999999999985 79999999 8999999887
No 242
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.17 E-value=1.2e-06 Score=73.97 Aligned_cols=76 Identities=12% Similarity=0.048 Sum_probs=53.9
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHH-hc--cCCCCCCceEEEEeeCCCCCCCCccCCC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIEN-NL--RHGDLRGSAVVTELTWGDDPDQDLIQPL 195 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~-n~--~~~~~~~~~~~~~l~w~~~~~~~~~~~~ 195 (210)
+.++|||||||+|.++..+++. +.+|+++|+ +.+++.+++|+.. |. .. ..++.+...+..+... ....+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~---~~~v~~~~~D~~~~l~--~~~~~ 151 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFD---DPRAVLVIDDARAYLE--RTEER 151 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG---CTTEEEEESCHHHHHH--HCCCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccccc---CCceEEEEchHHHHHH--hcCCC
Confidence 5679999999999999999986 458999999 9999999999864 22 11 1345555544221100 12457
Q ss_pred CcEEEEc
Q 028335 196 PDYGNES 202 (210)
Q Consensus 196 fD~Iia~ 202 (210)
||+|++.
T Consensus 152 fD~Ii~d 158 (314)
T 1uir_A 152 YDVVIID 158 (314)
T ss_dssp EEEEEEE
T ss_pred ccEEEEC
Confidence 9999973
No 243
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.14 E-value=5.3e-06 Score=71.05 Aligned_cols=76 Identities=17% Similarity=0.127 Sum_probs=58.6
Q ss_pred CCCEEEEECCccCHHHHHHHHcC--CEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLG--AQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g--~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
..++|||+|||+|..++.+++.. .+++..|.+.+++.+++++..... .++.+...++.+. ..+.+|++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~-----~rv~~~~gD~~~~-----~~~~~D~~ 248 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEE-----EQIDFQEGDFFKD-----PLPEADLY 248 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--C-----CSEEEEESCTTTS-----CCCCCSEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhccc-----CceeeecCccccC-----CCCCceEE
Confidence 45799999999999999999874 478889999999999988754432 4678777765332 23568999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
+...|+++
T Consensus 249 ~~~~vlh~ 256 (353)
T 4a6d_A 249 ILARVLHD 256 (353)
T ss_dssp EEESSGGG
T ss_pred Eeeeeccc
Confidence 99999986
No 244
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.14 E-value=3.2e-06 Score=70.07 Aligned_cols=78 Identities=18% Similarity=0.119 Sum_probs=55.9
Q ss_pred CCEEEEECCcc---CHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCC--------
Q 028335 123 GKKIVELGSGC---GLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD-------- 188 (210)
Q Consensus 123 ~~~VLELGcGt---Gl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~-------- 188 (210)
..+|||||||+ |.+...+.+. +.+|+++|. +.|++.+++++..+ .++.+...+..+...
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~-------~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD-------PNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC-------TTEEEEECCTTCHHHHHHSHHHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC-------CCeEEEEeeCCCchhhhccchhh
Confidence 47999999999 9887666654 579999999 99999999987421 346666666543210
Q ss_pred CCccCCCCcEEEEcceeee
Q 028335 189 QDLIQPLPDYGNESLLLFL 207 (210)
Q Consensus 189 ~~~~~~~fD~Iia~DviY~ 207 (210)
..+...+||+|++..++++
T Consensus 151 ~~~d~~~~d~v~~~~vlh~ 169 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHY 169 (274)
T ss_dssp HHCCTTSCCEEEETTTGGG
T ss_pred ccCCCCCCEEEEEechhhh
Confidence 0111247999999988874
No 245
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.11 E-value=3.6e-06 Score=63.33 Aligned_cols=70 Identities=16% Similarity=0.109 Sum_probs=47.8
Q ss_pred cCCCEEEEECCccCHHHHHHHHc-C--CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCC-----CCCc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL-G--AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDP-----DQDL 191 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~-g--~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~-----~~~~ 191 (210)
.++.+|||+|||+|..+..+++. + .+++++|. + ++.. .++.+...++.+.. ...+
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------------~~~~~~~~d~~~~~~~~~~~~~~ 84 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------------VGVDFLQGDFRDELVMKALLERV 84 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------------TTEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------------CcEEEEEcccccchhhhhhhccC
Confidence 46789999999999999999876 3 68999999 6 5421 23555555543321 0003
Q ss_pred cCCCCcEEEEcceee
Q 028335 192 IQPLPDYGNESLLLF 206 (210)
Q Consensus 192 ~~~~fD~Iia~DviY 206 (210)
.+.+||+|++..+++
T Consensus 85 ~~~~~D~i~~~~~~~ 99 (180)
T 1ej0_A 85 GDSKVQVVMSDMAPN 99 (180)
T ss_dssp TTCCEEEEEECCCCC
T ss_pred CCCceeEEEECCCcc
Confidence 346899999866544
No 246
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.10 E-value=1.4e-06 Score=72.64 Aligned_cols=77 Identities=10% Similarity=-0.080 Sum_probs=53.5
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
++++|||||||+|.++..+++. ..+|+++|+ +.+++.+++++..++... ...++.+...+..+... ....+||+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~-~~~~v~~~~~D~~~~l~--~~~~~fD~ 154 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGY-EDKRVNVFIEDASKFLE--NVTNTYDV 154 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGG-GSTTEEEEESCHHHHHH--HCCSCEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhcccc-CCCcEEEEECChHHHHH--hCCCCceE
Confidence 5689999999999999999876 358999999 999999999976532110 01345555544221110 01457999
Q ss_pred EEE
Q 028335 199 GNE 201 (210)
Q Consensus 199 Iia 201 (210)
|++
T Consensus 155 Ii~ 157 (283)
T 2i7c_A 155 IIV 157 (283)
T ss_dssp EEE
T ss_pred EEE
Confidence 997
No 247
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.07 E-value=1.1e-05 Score=75.20 Aligned_cols=76 Identities=12% Similarity=-0.009 Sum_probs=55.3
Q ss_pred CCCEEEEECCccCHHHHHHHHcC--------------------------------------------CEEEEEeh-HHHH
Q 028335 122 HGKKIVELGSGCGLVGCIAALLG--------------------------------------------AQVILTDL-PDRL 156 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g--------------------------------------------~~Vv~tD~-~~~l 156 (210)
++..+||.+||+|.+.+.++..+ .+++++|+ +.++
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 56789999999999999887642 47999999 9999
Q ss_pred HHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEEEc
Q 028335 157 RLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGNES 202 (210)
Q Consensus 157 ~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Iia~ 202 (210)
+.++.|+..+++. +.+.+...+..+.... ....+||+||+.
T Consensus 270 ~~A~~N~~~agv~----~~i~~~~~D~~~~~~~-~~~~~~d~Iv~N 310 (703)
T 3v97_A 270 QRARTNARLAGIG----ELITFEVKDVAQLTNP-LPKGPYGTVLSN 310 (703)
T ss_dssp HHHHHHHHHTTCG----GGEEEEECCGGGCCCS-CTTCCCCEEEEC
T ss_pred HHHHHHHHHcCCC----CceEEEECChhhCccc-cccCCCCEEEeC
Confidence 9999999999875 4566666664332111 111256666653
No 248
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.05 E-value=2.3e-06 Score=72.62 Aligned_cols=72 Identities=13% Similarity=0.043 Sum_probs=51.4
Q ss_pred CEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 124 KKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 124 ~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
.+|||||||+|.++..+++. +.+|+++|+ +.+++.+++++..+. ..++.+..-+..... ......+||+||
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-----~~rv~v~~~Da~~~l-~~~~~~~fDvIi 164 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-----APRVKIRVDDARMVA-ESFTPASRDVII 164 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-----TTTEEEEESCHHHHH-HTCCTTCEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-----CCceEEEECcHHHHH-hhccCCCCCEEE
Confidence 49999999999999999983 569999999 999999999975432 134555544421110 011245799998
Q ss_pred E
Q 028335 201 E 201 (210)
Q Consensus 201 a 201 (210)
.
T Consensus 165 ~ 165 (317)
T 3gjy_A 165 R 165 (317)
T ss_dssp E
T ss_pred E
Confidence 6
No 249
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.05 E-value=3.6e-06 Score=70.59 Aligned_cols=56 Identities=21% Similarity=0.214 Sum_probs=43.6
Q ss_pred ccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHH
Q 028335 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLK 160 (210)
Q Consensus 101 ~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~ 160 (210)
.++..|...|.... ...++++|||+|||||.++..+++.|+ +|+++|+ +.||..+.
T Consensus 68 rg~~Kl~~~l~~~~----~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~ 125 (291)
T 3hp7_A 68 RGGLKLEKALAVFN----LSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKL 125 (291)
T ss_dssp TTHHHHHHHHHHTT----CCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHH
T ss_pred chHHHHHHHHHhcC----CCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 45667777766431 134688999999999999999998876 8999999 88887643
No 250
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.02 E-value=3.9e-06 Score=63.26 Aligned_cols=47 Identities=23% Similarity=0.316 Sum_probs=39.2
Q ss_pred HHHHHHhhhhhcCccccCCCEEEEECCccC-HHHHHHHH-cCCEEEEEeh-HHHHH
Q 028335 105 VLGKFLEHAVDSGMLLLHGKKIVELGSGCG-LVGCIAAL-LGAQVILTDL-PDRLR 157 (210)
Q Consensus 105 ~la~~L~~~~~~~~~~~~~~~VLELGcGtG-l~~l~la~-~g~~Vv~tD~-~~~l~ 157 (210)
.|++|+.+.. ..+.+|||+|||.| .++..++. .|..|++||+ +.+++
T Consensus 24 ~LaeYI~~~~------~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 24 DLAVYIIRCS------GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG 73 (153)
T ss_dssp HHHHHHHHHS------CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT
T ss_pred HHHHHHHhcC------CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc
Confidence 5788987652 35679999999999 59999996 8999999999 77765
No 251
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.02 E-value=2.1e-06 Score=70.91 Aligned_cols=72 Identities=6% Similarity=-0.159 Sum_probs=50.3
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHH--hccCCCCCCceEEEEeeCCCCCCCCccCCCCcE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIEN--NLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDY 198 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~--n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~ 198 (210)
..++|||||||+|.++..+++.+.+|+++|+ +.+++.+++++.. +... ..++.+.. ++.... . .+||+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~---~~rv~~~~---~D~~~~--~-~~fD~ 142 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKN---NKNFTHAK---QLLDLD--I-KKYDL 142 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHT---CTTEEEES---SGGGSC--C-CCEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccC---CCeEEEEe---chHHHH--H-hhCCE
Confidence 4679999999999999888866668999999 9999999987643 1221 12344432 222221 1 57999
Q ss_pred EEEc
Q 028335 199 GNES 202 (210)
Q Consensus 199 Iia~ 202 (210)
|++.
T Consensus 143 Ii~d 146 (262)
T 2cmg_A 143 IFCL 146 (262)
T ss_dssp EEES
T ss_pred EEEC
Confidence 9963
No 252
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.99 E-value=2.5e-05 Score=71.93 Aligned_cols=73 Identities=10% Similarity=-0.021 Sum_probs=53.0
Q ss_pred cCCCEEEEECCccCHHHHHHHHc---CC---EEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL---GA---QVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQP 194 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~---g~---~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~ 194 (210)
.+.+.|||+|||+|.++..+++. ++ +|+|+|...+...+++++..|+.. +++++..-+..+.. ...
T Consensus 356 ~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~----dkVtVI~gd~eev~----LPE 427 (637)
T 4gqb_A 356 TNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWG----SQVTVVSSDMREWV----APE 427 (637)
T ss_dssp TCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTG----GGEEEEESCTTTCC----CSS
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCC----CeEEEEeCcceecc----CCc
Confidence 45568999999999996555443 22 689999944666788888889875 67888877654432 235
Q ss_pred CCcEEEE
Q 028335 195 LPDYGNE 201 (210)
Q Consensus 195 ~fD~Iia 201 (210)
++|+||+
T Consensus 428 KVDIIVS 434 (637)
T 4gqb_A 428 KADIIVS 434 (637)
T ss_dssp CEEEEEC
T ss_pred ccCEEEE
Confidence 7899986
No 253
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.98 E-value=1e-06 Score=73.28 Aligned_cols=47 Identities=21% Similarity=0.086 Sum_probs=35.7
Q ss_pred ccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-H
Q 028335 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-P 153 (210)
Q Consensus 101 ~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~ 153 (210)
.++..|...+.. ..+.++.+|||||||+|..+..+++. .+|+++|+ +
T Consensus 66 R~a~KL~~i~~~-----~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~ 113 (276)
T 2wa2_A 66 RGTAKLAWIDER-----GGVELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT 113 (276)
T ss_dssp HHHHHHHHHHHT-----TSCCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC
T ss_pred hHHHHHHHHHHc-----CCCCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch
Confidence 345555554443 12346789999999999999999988 78999999 6
No 254
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.96 E-value=1e-05 Score=68.90 Aligned_cols=69 Identities=19% Similarity=0.152 Sum_probs=51.6
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
+..+|||+|||+|..+..+++. +.+++++|++.+++.+++. .++.+...+..+. + +.||+|
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-----------~~v~~~~~d~~~~----~--p~~D~v 250 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGS-----------NNLTYVGGDMFTS----I--PNADAV 250 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCB-----------TTEEEEECCTTTC----C--CCCSEE
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhcccC-----------CCcEEEeccccCC----C--CCccEE
Confidence 5679999999999999999876 5589999997777665531 2366666654321 2 349999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 251 ~~~~~lh~ 258 (352)
T 1fp2_A 251 LLKYILHN 258 (352)
T ss_dssp EEESCGGG
T ss_pred Eeehhhcc
Confidence 99999874
No 255
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.94 E-value=4.5e-07 Score=73.70 Aligned_cols=44 Identities=20% Similarity=0.314 Sum_probs=39.3
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIE 164 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~ 164 (210)
.++.+|||+|||+|.++..+++.+.+|+++|+ +.+++.+++|+.
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~ 72 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK 72 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc
Confidence 36779999999999999999988899999999 889888888765
No 256
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.94 E-value=2.4e-05 Score=65.38 Aligned_cols=46 Identities=22% Similarity=0.304 Sum_probs=42.7
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHh
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENN 166 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n 166 (210)
.++..|||++||+|..++.++++|.+++++|+ +.+++.+++|+...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 37889999999999999999999999999999 99999999998765
No 257
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.94 E-value=7.5e-06 Score=67.18 Aligned_cols=43 Identities=19% Similarity=0.196 Sum_probs=36.9
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCE--EEEEeh-HHHHHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQ--VILTDL-PDRLRLLKKNIEN 165 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~--Vv~tD~-~~~l~~~~~N~~~ 165 (210)
.++.+|||+|||+|.++. +++ +.+ |+++|+ +.+++.+++|+..
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~ 65 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFL 65 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTT
T ss_pred CCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhcc
Confidence 467899999999999999 654 667 999999 9999999988653
No 258
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.94 E-value=6.9e-06 Score=64.65 Aligned_cols=60 Identities=18% Similarity=0.062 Sum_probs=42.5
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
++.+|||+|||+|.++..+ +.+|+++|+ +. + +.+...+..+ ..+.+.+||+|+
T Consensus 67 ~~~~vLDiG~G~G~~~~~l---~~~v~~~D~s~~-----------~---------~~~~~~d~~~---~~~~~~~fD~v~ 120 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSI---RNPVHCFDLASL-----------D---------PRVTVCDMAQ---VPLEDESVDVAV 120 (215)
T ss_dssp TTSCEEEETCTTCHHHHHC---CSCEEEEESSCS-----------S---------TTEEESCTTS---CSCCTTCEEEEE
T ss_pred CCCeEEEECCcCCHHHHHh---hccEEEEeCCCC-----------C---------ceEEEecccc---CCCCCCCEeEEE
Confidence 6679999999999988776 468999999 55 1 1223333322 223456899999
Q ss_pred Ecceeee
Q 028335 201 ESLLLFL 207 (210)
Q Consensus 201 a~DviY~ 207 (210)
+..+++.
T Consensus 121 ~~~~l~~ 127 (215)
T 2zfu_A 121 FCLSLMG 127 (215)
T ss_dssp EESCCCS
T ss_pred Eehhccc
Confidence 9998864
No 259
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.93 E-value=5.5e-05 Score=60.06 Aligned_cols=55 Identities=24% Similarity=0.233 Sum_probs=44.4
Q ss_pred CCCEEEEECCccCHHHHHHHHc-CCEEEEEeh-HHHHHHHHHHHHHhcc--CCCCCCceEEEEee
Q 028335 122 HGKKIVELGSGCGLVGCIAALL-GAQVILTDL-PDRLRLLKKNIENNLR--HGDLRGSAVVTELT 182 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~-g~~Vv~tD~-~~~l~~~~~N~~~n~~--~~~~~~~~~~~~l~ 182 (210)
+.++|||+|| |.-++.+|+. +.+|+.+|. ++..+.+++|++.++. . .++.+...+
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~----~~I~~~~gd 88 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEG----TEVNIVWTD 88 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTT----CEEEEEECC
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCC----CceEEEEeC
Confidence 6779999998 5788888876 679999999 8999999999998875 3 355555444
No 260
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.87 E-value=2.3e-05 Score=61.39 Aligned_cols=47 Identities=23% Similarity=0.333 Sum_probs=36.2
Q ss_pred cHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh
Q 028335 102 SGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL 152 (210)
Q Consensus 102 aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~ 152 (210)
++..|.+.+.+. ....++.+|||||||+|..+..+++.+.+|+++|+
T Consensus 9 a~~KL~ei~~~~----~~~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~ 55 (191)
T 3dou_A 9 AAFKLEFLLDRY----RVVRKGDAVIEIGSSPGGWTQVLNSLARKIISIDL 55 (191)
T ss_dssp HHHHHHHHHHHH----CCSCTTCEEEEESCTTCHHHHHHTTTCSEEEEEES
T ss_pred HHHHHHHHHHHc----CCCCCCCEEEEEeecCCHHHHHHHHcCCcEEEEec
Confidence 445555555432 11346889999999999999999988889999999
No 261
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.86 E-value=4e-05 Score=67.64 Aligned_cols=75 Identities=13% Similarity=-0.019 Sum_probs=52.2
Q ss_pred CCCEEEEECCccCHHHHHHHHc---------------CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL---------------GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~---------------g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++.+|||.|||+|.+.+.+++. ..+++|+|+ +.+++.++.|+..++... ....+...+.
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~---~~~~i~~gD~-- 245 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGT---DRSPIVCEDS-- 245 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCS---SCCSEEECCT--
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCc---CCCCEeeCCC--
Confidence 5679999999999998888753 357999999 999999999999887531 0223333332
Q ss_pred CCCCCccCCCCcEEEEcc
Q 028335 186 DPDQDLIQPLPDYGNESL 203 (210)
Q Consensus 186 ~~~~~~~~~~fD~Iia~D 203 (210)
.... ...+||+|++.-
T Consensus 246 -l~~~-~~~~fD~Iv~NP 261 (445)
T 2okc_A 246 -LEKE-PSTLVDVILANP 261 (445)
T ss_dssp -TTSC-CSSCEEEEEECC
T ss_pred -CCCc-ccCCcCEEEECC
Confidence 1111 123788888753
No 262
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.81 E-value=8.8e-05 Score=67.23 Aligned_cols=48 Identities=15% Similarity=0.059 Sum_probs=41.3
Q ss_pred CCCEEEEECCccCHHHHHHHHc-----CCEEEEEeh-HHHHHHHHHHHHHhccC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL-----GAQVILTDL-PDRLRLLKKNIENNLRH 169 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~-----g~~Vv~tD~-~~~l~~~~~N~~~n~~~ 169 (210)
++.+|+|.+||+|.+.+.+++. ..+++|.|+ +.++.+++.|+..++..
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~ 274 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP 274 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC
Confidence 5779999999999888877765 357999999 99999999999888763
No 263
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=97.81 E-value=1.9e-05 Score=68.47 Aligned_cols=77 Identities=12% Similarity=-0.048 Sum_probs=51.3
Q ss_pred HHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEE
Q 028335 104 VVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVT 179 (210)
Q Consensus 104 ~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~ 179 (210)
..+++++..... ..++.+|||+|||+|.+++.+++. +.+++++|+ +.+++.+ .++.+.
T Consensus 25 ~~l~~~~~~~~~----~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------------~~~~~~ 86 (421)
T 2ih2_A 25 PEVVDFMVSLAE----APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------------PWAEGI 86 (421)
T ss_dssp HHHHHHHHHHCC----CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------------TTEEEE
T ss_pred HHHHHHHHHhhc----cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------------CCCcEE
Confidence 445666665432 124669999999999999999864 468999999 8887655 123444
Q ss_pred EeeCCCCCCCCccCCCCcEEEEc
Q 028335 180 ELTWGDDPDQDLIQPLPDYGNES 202 (210)
Q Consensus 180 ~l~w~~~~~~~~~~~~fD~Iia~ 202 (210)
..+..... ...+||+|++.
T Consensus 87 ~~D~~~~~----~~~~fD~Ii~N 105 (421)
T 2ih2_A 87 LADFLLWE----PGEAFDLILGN 105 (421)
T ss_dssp ESCGGGCC----CSSCEEEEEEC
T ss_pred eCChhhcC----ccCCCCEEEEC
Confidence 44432211 23579999884
No 264
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.76 E-value=3.2e-05 Score=65.99 Aligned_cols=69 Identities=16% Similarity=0.100 Sum_probs=51.1
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
+..+|||+|||+|..+..+++. +.+++++|++.+++.+++ . .++.+...+..+ .+ +.||+|
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~-----~~v~~~~~d~~~----~~--~~~D~v 255 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTG------N-----ENLNFVGGDMFK----SI--PSADAV 255 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCC------C-----SSEEEEECCTTT----CC--CCCSEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhccc------C-----CCcEEEeCccCC----CC--CCceEE
Confidence 5679999999999999999876 348999999777755442 1 236666666533 12 359999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 256 ~~~~vlh~ 263 (358)
T 1zg3_A 256 LLKWVLHD 263 (358)
T ss_dssp EEESCGGG
T ss_pred EEcccccC
Confidence 99999874
No 265
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.75 E-value=3.1e-05 Score=66.63 Aligned_cols=69 Identities=17% Similarity=0.066 Sum_probs=51.0
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
+..+|||+|||+|..+..+++. +.+++++|++.+++.++++ .++.+...+..+. ++. -|+|
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-----------~~v~~~~~d~~~~----~p~--~D~v 265 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAF-----------SGVEHLGGDMFDG----VPK--GDAI 265 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCC-----------TTEEEEECCTTTC----CCC--CSEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhc-----------CCCEEEecCCCCC----CCC--CCEE
Confidence 4579999999999999999875 4589999998777655431 3467777665432 222 2999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 266 ~~~~vlh~ 273 (368)
T 3reo_A 266 FIKWICHD 273 (368)
T ss_dssp EEESCGGG
T ss_pred EEechhhc
Confidence 99999873
No 266
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.74 E-value=2.4e-05 Score=67.21 Aligned_cols=69 Identities=14% Similarity=-0.030 Sum_probs=50.9
Q ss_pred CCCEEEEECCccCHHHHHHHHcC--CEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALLG--AQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g--~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
++.+|||+|||+|..+..+++.. .+++++|++.+++.+++. .++.+...+..+. + +.||+|
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-----------~~v~~~~~d~~~~----~--~~~D~v 271 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPL-----------SGIEHVGGDMFAS----V--PQGDAM 271 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCC-----------TTEEEEECCTTTC----C--CCEEEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhhc-----------CCCEEEeCCcccC----C--CCCCEE
Confidence 56799999999999999999874 478899997777655431 2366666665331 2 239999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 272 ~~~~~lh~ 279 (372)
T 1fp1_D 272 ILKAVCHN 279 (372)
T ss_dssp EEESSGGG
T ss_pred EEeccccc
Confidence 99999874
No 267
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.74 E-value=4.2e-05 Score=59.32 Aligned_cols=48 Identities=17% Similarity=0.088 Sum_probs=34.9
Q ss_pred cHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc----CCEEEEEeh-H
Q 028335 102 SGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL----GAQVILTDL-P 153 (210)
Q Consensus 102 aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~----g~~Vv~tD~-~ 153 (210)
++..|.+.+... ..+.++.+|||||||+|.++..+++. +.+|+++|+ +
T Consensus 6 ~~~kl~~~~~~~----~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~ 58 (201)
T 2plw_A 6 AAYKLIELDNKY----LFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKI 58 (201)
T ss_dssp THHHHHHHHHHH----CCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred HHHHHHHHHHHc----CCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCc
Confidence 455555544432 11236779999999999999999875 358999999 5
No 268
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.69 E-value=0.0001 Score=60.34 Aligned_cols=48 Identities=15% Similarity=0.127 Sum_probs=42.4
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhcc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLR 168 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~ 168 (210)
.++..|||..||+|..++++.++|.+++++|+ +.+++.+++|+..+++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 37889999999999999999999999999999 9999999999987753
No 269
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.69 E-value=4.2e-05 Score=65.72 Aligned_cols=69 Identities=14% Similarity=0.013 Sum_probs=51.4
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
+..+|||+|||+|..+..+++. +.+++++|++.+++.++++ .++.+...+..+. ++. . |+|
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-----------~~v~~~~~D~~~~----~p~-~-D~v 263 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQF-----------PGVTHVGGDMFKE----VPS-G-DTI 263 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCC-----------TTEEEEECCTTTC----CCC-C-SEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhc-----------CCeEEEeCCcCCC----CCC-C-CEE
Confidence 4679999999999999999875 4589999998777655431 3577777765432 222 2 999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 264 ~~~~vlh~ 271 (364)
T 3p9c_A 264 LMKWILHD 271 (364)
T ss_dssp EEESCGGG
T ss_pred EehHHhcc
Confidence 99999874
No 270
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.61 E-value=0.00012 Score=56.48 Aligned_cols=33 Identities=21% Similarity=0.259 Sum_probs=29.2
Q ss_pred cCCCEEEEECCccCHHHHHHHHc-C----------CEEEEEeh-H
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL-G----------AQVILTDL-P 153 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~-g----------~~Vv~tD~-~ 153 (210)
.++.+|||||||+|.+++.+++. + .+|+++|+ +
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~ 65 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLH 65 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechh
Confidence 46789999999999999999976 4 68999999 5
No 271
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.49 E-value=0.00011 Score=69.28 Aligned_cols=47 Identities=17% Similarity=0.085 Sum_probs=39.2
Q ss_pred CCCEEEEECCccCHHHHHHHHcC-----CEEEEEeh-HHHHHHH--HHHHHHhcc
Q 028335 122 HGKKIVELGSGCGLVGCIAALLG-----AQVILTDL-PDRLRLL--KKNIENNLR 168 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g-----~~Vv~tD~-~~~l~~~--~~N~~~n~~ 168 (210)
++.+|||.|||+|.+.+.+++.. .+++|+|+ +.++..+ +.|+..|..
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~L 375 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQL 375 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhh
Confidence 57799999999999999988753 36999999 8899998 778776544
No 272
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.47 E-value=0.00014 Score=67.52 Aligned_cols=72 Identities=18% Similarity=0.130 Sum_probs=46.4
Q ss_pred CCEEEEECCccCHHHHHH---HH-cC-----------CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCC
Q 028335 123 GKKIVELGSGCGLVGCIA---AL-LG-----------AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDD 186 (210)
Q Consensus 123 ~~~VLELGcGtGl~~l~l---a~-~g-----------~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~ 186 (210)
++.|||+|||+|.++..+ ++ .+ .+|+|+|. +.++..++.... |+.. +++++..-+..+.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~----d~VtVI~gd~eev 484 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWK----RRVTIIESDMRSL 484 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTT----TCSEEEESCGGGH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCC----CeEEEEeCchhhc
Confidence 457999999999997543 22 12 28999999 766655555444 7654 4566666554332
Q ss_pred CCCCcc-----CCCCcEEEEc
Q 028335 187 PDQDLI-----QPLPDYGNES 202 (210)
Q Consensus 187 ~~~~~~-----~~~fD~Iia~ 202 (210)
.++ ..++|+||+-
T Consensus 485 ---~lp~~~~~~ekVDIIVSE 502 (745)
T 3ua3_A 485 ---PGIAKDRGFEQPDIIVSE 502 (745)
T ss_dssp ---HHHHHHTTCCCCSEEEEC
T ss_pred ---ccccccCCCCcccEEEEe
Confidence 111 3578999863
No 273
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.47 E-value=0.00011 Score=60.65 Aligned_cols=47 Identities=21% Similarity=0.180 Sum_probs=36.2
Q ss_pred ccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-H
Q 028335 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL-P 153 (210)
Q Consensus 101 ~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~ 153 (210)
.++..|...+... .+.++.+|||||||+|..+..+++. .+|+++|+ +
T Consensus 58 R~a~KL~~i~~~~-----~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~ 105 (265)
T 2oxt_A 58 RGTAKLAWMEERG-----YVELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT 105 (265)
T ss_dssp THHHHHHHHHHHT-----SCCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC
T ss_pred hHHHHHHHHHHcC-----CCCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch
Confidence 3455565555431 2346789999999999999999988 78999999 6
No 274
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.33 E-value=0.00027 Score=63.99 Aligned_cols=48 Identities=17% Similarity=-0.002 Sum_probs=40.5
Q ss_pred CCCEEEEECCccCHHHHHHHHc--------------------CCEEEEEeh-HHHHHHHHHHHHHhccC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--------------------GAQVILTDL-PDRLRLLKKNIENNLRH 169 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--------------------g~~Vv~tD~-~~~l~~~~~N~~~n~~~ 169 (210)
++.+|||.+||+|.+.+.+++. ..+++++|+ +.++.+++.|+..++..
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~ 237 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIE 237 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCC
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCC
Confidence 5779999999999888887753 136999999 99999999999887654
No 275
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.32 E-value=0.00032 Score=63.61 Aligned_cols=46 Identities=13% Similarity=0.067 Sum_probs=38.5
Q ss_pred CEEEEECCccCHHHHHHHHc-----------------CCEEEEEeh-HHHHHHHHHHHHHhccC
Q 028335 124 KKIVELGSGCGLVGCIAALL-----------------GAQVILTDL-PDRLRLLKKNIENNLRH 169 (210)
Q Consensus 124 ~~VLELGcGtGl~~l~la~~-----------------g~~Vv~tD~-~~~l~~~~~N~~~n~~~ 169 (210)
.+|||.+||||.+.+.+++. ..+++|+|+ +.++.+++.|+..+++.
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~ 309 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGID 309 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 38999999999887776532 347999999 99999999999988764
No 276
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.19 E-value=0.00051 Score=59.12 Aligned_cols=43 Identities=26% Similarity=0.359 Sum_probs=38.6
Q ss_pred CCCEEEEECCccCHHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHH
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGA-QVILTDL-PDRLRLLKKNIE 164 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~ 164 (210)
++++||+||||+|.++..+++.++ +|+++|+ +.+++.+++|+.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~ 232 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMR 232 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
Confidence 578999999999999998887764 7999999 999999999974
No 277
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.18 E-value=0.0002 Score=60.15 Aligned_cols=45 Identities=27% Similarity=0.243 Sum_probs=34.4
Q ss_pred cHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh
Q 028335 102 SGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDL 152 (210)
Q Consensus 102 aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~ 152 (210)
++..|...+.. ..+.++.+|||||||+|..+..+++. .+|+++|+
T Consensus 67 ~a~KL~~i~~~-----~~~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~ 111 (305)
T 2p41_A 67 GSAKLRWFVER-----NLVTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKG 111 (305)
T ss_dssp HHHHHHHHHHT-----TSSCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEE
T ss_pred HHHHHHHHHHc-----CCCCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEec
Confidence 45555555443 12345789999999999999999988 58999998
No 278
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.11 E-value=0.00023 Score=62.24 Aligned_cols=66 Identities=12% Similarity=-0.001 Sum_probs=44.4
Q ss_pred CCCEEEEECCc------cCHHHHHHHHc---CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCc
Q 028335 122 HGKKIVELGSG------CGLVGCIAALL---GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDL 191 (210)
Q Consensus 122 ~~~~VLELGcG------tGl~~l~la~~---g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~ 191 (210)
+..+||||||| +|..++.+++. +++|+++|+ +.+. .+ ..++.+...+..+ ..+
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~------~~rI~fv~GDa~d---lpf 278 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VD------ELRIRTIQGDQND---AEF 278 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GC------BTTEEEEECCTTC---HHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hc------CCCcEEEEecccc---cch
Confidence 56799999999 77677776653 679999999 7652 11 1356666665433 222
Q ss_pred c------CCCCcEEEEcce
Q 028335 192 I------QPLPDYGNESLL 204 (210)
Q Consensus 192 ~------~~~fD~Iia~Dv 204 (210)
. ..+||+|++.-.
T Consensus 279 ~~~l~~~d~sFDlVisdgs 297 (419)
T 3sso_A 279 LDRIARRYGPFDIVIDDGS 297 (419)
T ss_dssp HHHHHHHHCCEEEEEECSC
T ss_pred hhhhhcccCCccEEEECCc
Confidence 2 468999997543
No 279
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.03 E-value=0.0014 Score=54.28 Aligned_cols=57 Identities=21% Similarity=0.292 Sum_probs=40.2
Q ss_pred CEEEEECCcc---CHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 124 KKIVELGSGC---GLVGCIAALL--GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 124 ~~VLELGcGt---Gl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.+|||||||+ |.+...+.+. +++|+++|. +.||..++.++..+.. .++.+...|..+
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~-----~~~~~v~aD~~~ 142 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPE-----GRTAYVEADMLD 142 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSS-----SEEEEEECCTTC
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCC-----CcEEEEEecccC
Confidence 5899999997 3443333333 679999999 9999999988754321 356677766544
No 280
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.03 E-value=0.00094 Score=57.59 Aligned_cols=33 Identities=24% Similarity=0.079 Sum_probs=30.9
Q ss_pred ccCCCEEEEECCccCHHHHHHHHcCCEEEEEeh
Q 028335 120 LLHGKKIVELGSGCGLVGCIAALLGAQVILTDL 152 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~ 152 (210)
+.+|++||||||++|--+..++++|++|+++|.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~ 241 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNMWVYSVDN 241 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTCEEEEECS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEh
Confidence 457999999999999999999999999999998
No 281
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.81 E-value=0.0033 Score=53.98 Aligned_cols=91 Identities=18% Similarity=0.089 Sum_probs=60.4
Q ss_pred ccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCC--EEEEEeh-HHHHHHHHHHHHHhccCC-CCCCce
Q 028335 101 DSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGA--QVILTDL-PDRLRLLKKNIENNLRHG-DLRGSA 176 (210)
Q Consensus 101 ~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~--~Vv~tD~-~~~l~~~~~N~~~n~~~~-~~~~~~ 176 (210)
.+|.+.+..|. ..+|.+|||++||.|-=++.++..+. .|++.|+ +..+..+++|++..+... ....++
T Consensus 135 ~aS~l~~~~L~--------~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v 206 (359)
T 4fzv_A 135 AASLLPVLALG--------LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQV 206 (359)
T ss_dssp GGGHHHHHHHC--------CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSE
T ss_pred HHHHHHHHHhC--------CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCce
Confidence 45555554443 24788999999999988888887755 6999999 889999999999876541 112344
Q ss_pred EEEEeeCCCCCCCCccCCCCcEEEE
Q 028335 177 VVTELTWGDDPDQDLIQPLPDYGNE 201 (210)
Q Consensus 177 ~~~~l~w~~~~~~~~~~~~fD~Iia 201 (210)
.+...|-... .......||.|+.
T Consensus 207 ~v~~~D~~~~--~~~~~~~fD~VLl 229 (359)
T 4fzv_A 207 RVTSWDGRKW--GELEGDTYDRVLV 229 (359)
T ss_dssp EEECCCGGGH--HHHSTTCEEEEEE
T ss_pred EEEeCchhhc--chhccccCCEEEE
Confidence 4444331110 0112357888874
No 282
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=96.62 E-value=0.0007 Score=51.35 Aligned_cols=64 Identities=9% Similarity=-0.116 Sum_probs=43.2
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCCcEE
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLPDYG 199 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~I 199 (210)
.++.+|||||||. +.+|. +.|++.++++...+ +.+...+..+.....+.+.+||+|
T Consensus 11 ~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~~~---------~~~~~~d~~~~~~~~~~~~~fD~V 67 (176)
T 2ld4_A 11 SAGQFVAVVWDKS--------------SPVEALKGLVDKLQALTGNE---------GRVSVENIKQLLQSAHKESSFDII 67 (176)
T ss_dssp CTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHTTTT---------SEEEEEEGGGGGGGCCCSSCEEEE
T ss_pred CCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhcccC---------cEEEEechhcCccccCCCCCEeEE
Confidence 4788999999996 23899 89999998875322 444555543321101145689999
Q ss_pred EEcceeee
Q 028335 200 NESLLLFL 207 (210)
Q Consensus 200 ia~DviY~ 207 (210)
++..++++
T Consensus 68 ~~~~~l~~ 75 (176)
T 2ld4_A 68 LSGLVPGS 75 (176)
T ss_dssp EECCSTTC
T ss_pred EECChhhh
Confidence 99887754
No 283
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.40 E-value=0.0062 Score=50.59 Aligned_cols=42 Identities=21% Similarity=0.104 Sum_probs=38.0
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~ 163 (210)
.++..+||.+||.|..+..+++.+.+|+++|+ +.++..+++ +
T Consensus 21 ~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L 63 (285)
T 1wg8_A 21 RPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-L 63 (285)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-T
T ss_pred CCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-h
Confidence 36789999999999999999988789999999 999998887 5
No 284
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=96.39 E-value=0.0034 Score=52.33 Aligned_cols=33 Identities=18% Similarity=0.353 Sum_probs=23.6
Q ss_pred ccCCCEEEEECCcc------CHHHHHHHH-cC--CEEEEEeh-HH
Q 028335 120 LLHGKKIVELGSGC------GLVGCIAAL-LG--AQVILTDL-PD 154 (210)
Q Consensus 120 ~~~~~~VLELGcGt------Gl~~l~la~-~g--~~Vv~tD~-~~ 154 (210)
+.++.+|||||||+ |. ..+++ .+ .+|+++|+ +.
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~ 103 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF 103 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC
Confidence 34678999999944 65 33443 33 68999999 65
No 285
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=96.01 E-value=0.034 Score=46.37 Aligned_cols=77 Identities=12% Similarity=0.019 Sum_probs=52.3
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHHHH-hccCCCCCCceEEEEeeCCCCCCCCccCCCCc
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNIEN-NLRHGDLRGSAVVTELTWGDDPDQDLIQPLPD 197 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~~~-n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD 197 (210)
+.++||=||.|.|...-.+++. ..+|+.+|+ +.+++.+++-+.. |.... ...++.+..-|--..... ....||
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~-~dpRv~v~~~Dg~~~l~~--~~~~yD 159 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSY-DDPRFKLVIDDGVNFVNQ--TSQTFD 159 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGG-GCTTEEEEESCTTTTTSC--SSCCEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCcccccccc-CCCcEEEEechHHHHHhh--ccccCC
Confidence 5679999999999988888876 348999999 9999999987643 22110 113455555443222221 346899
Q ss_pred EEEE
Q 028335 198 YGNE 201 (210)
Q Consensus 198 ~Iia 201 (210)
+||.
T Consensus 160 vIi~ 163 (294)
T 3o4f_A 160 VIIS 163 (294)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9984
No 286
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.93 E-value=0.015 Score=50.53 Aligned_cols=45 Identities=16% Similarity=0.166 Sum_probs=39.7
Q ss_pred cCCCEEEEECCccCHHHHHHH-HcC---CEEEEEeh-HHHHHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAA-LLG---AQVILTDL-PDRLRLLKKNIEN 165 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la-~~g---~~Vv~tD~-~~~l~~~~~N~~~ 165 (210)
.++..|+|+||+.|..++.++ +.+ .+|++.|. +...+.+++|+..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 367799999999999999887 443 58999999 9999999999988
No 287
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.93 E-value=0.015 Score=49.24 Aligned_cols=44 Identities=20% Similarity=0.237 Sum_probs=38.6
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCE-EEEEeh-HHHHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQ-VILTDL-PDRLRLLKKNIE 164 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~-Vv~tD~-~~~l~~~~~N~~ 164 (210)
..+.+++||.||+|.+++.+.+.|.+ |.++|. +.+++..+.|..
T Consensus 9 ~~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~ 54 (327)
T 2c7p_A 9 LTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFG 54 (327)
T ss_dssp TTTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHS
T ss_pred cCCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC
Confidence 35679999999999999999999986 889999 899999888863
No 288
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=95.91 E-value=0.023 Score=51.13 Aligned_cols=48 Identities=13% Similarity=0.032 Sum_probs=39.1
Q ss_pred CCCEEEEECCccCHHHHHHHHc---------------CCEEEEEeh-HHHHHHHHHHHHHhccC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL---------------GAQVILTDL-PDRLRLLKKNIENNLRH 169 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~---------------g~~Vv~tD~-~~~l~~~~~N~~~n~~~ 169 (210)
++.+|+|-.||||.+-+.+.+. ...+.|.|+ +.+..+++.|+..++..
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~ 280 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE 280 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc
Confidence 5679999999999777766542 235999999 89999999999888764
No 289
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.69 E-value=0.018 Score=49.26 Aligned_cols=42 Identities=19% Similarity=0.232 Sum_probs=36.7
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEeh-HHHHHHHHHHH
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~-~~~l~~~~~N~ 163 (210)
++..|||+|.|.|.++..++.. +.+|+++++ +..++.+++..
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~ 102 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF 102 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc
Confidence 3579999999999999999975 568999999 88888888775
No 290
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.41 E-value=0.00079 Score=55.97 Aligned_cols=45 Identities=13% Similarity=0.098 Sum_probs=40.3
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIEN 165 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~ 165 (210)
+.+..+||+-+|||.+|+.+.+.+.+++++|. +..++.+++|+..
T Consensus 90 ~n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~ 135 (283)
T 2oo3_A 90 INLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHF 135 (283)
T ss_dssp HSSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCT
T ss_pred hcCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCc
Confidence 46778999999999999999887778999999 9999999999864
No 291
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.38 E-value=0.019 Score=48.76 Aligned_cols=41 Identities=24% Similarity=0.156 Sum_probs=36.3
Q ss_pred CEEEEECCccCHHHHHHHHcC--C-EEEEEeh-HHHHHHHHHHHH
Q 028335 124 KKIVELGSGCGLVGCIAALLG--A-QVILTDL-PDRLRLLKKNIE 164 (210)
Q Consensus 124 ~~VLELGcGtGl~~l~la~~g--~-~Vv~tD~-~~~l~~~~~N~~ 164 (210)
.+||||.||+|.+++.+.+.| . .|+++|. +.+++..+.|..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~ 47 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP 47 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc
Confidence 479999999999999999888 4 4899999 899999998864
No 292
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=95.32 E-value=0.07 Score=46.13 Aligned_cols=81 Identities=19% Similarity=0.116 Sum_probs=49.5
Q ss_pred CCEEEEECCccCHHHHHHHHc--------------C-----CEEEEEehH--H---HH---HHHHHHHHH-hccCCCCCC
Q 028335 123 GKKIVELGSGCGLVGCIAALL--------------G-----AQVILTDLP--D---RL---RLLKKNIEN-NLRHGDLRG 174 (210)
Q Consensus 123 ~~~VLELGcGtGl~~l~la~~--------------g-----~~Vv~tD~~--~---~l---~~~~~N~~~-n~~~~~~~~ 174 (210)
..+|+||||++|..++.+... + .+|+..|++ + +. ....+.+.. ++.. .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~----~ 128 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRK----I 128 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCC----T
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCC----C
Confidence 468999999999999887653 1 268999984 2 22 222222212 1211 1
Q ss_pred ceEEEEeeCCCCCCCCccCCCCcEEEEcceeee
Q 028335 175 SAVVTELTWGDDPDQDLIQPLPDYGNESLLLFL 207 (210)
Q Consensus 175 ~~~~~~l~w~~~~~~~~~~~~fD~Iia~DviY~ 207 (210)
...+..-.=|......+++.+||+|.++=++++
T Consensus 129 ~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHW 161 (384)
T 2efj_A 129 GSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHW 161 (384)
T ss_dssp TSEEEEECCSCTTSCCSCTTCEEEEEEESCTTB
T ss_pred CceEEEecchhhhhccCCCCceEEEEecceeee
Confidence 123333333555666778889999999877765
No 293
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.14 E-value=0.035 Score=46.64 Aligned_cols=46 Identities=15% Similarity=0.178 Sum_probs=41.1
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHh
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-PDRLRLLKKNIENN 166 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n 166 (210)
.++..|||..||+|..++++.++|.+.+++|+ +..++.+++++...
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCS
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHhc
Confidence 37889999999999999999999999999999 88888888887543
No 294
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.05 E-value=0.034 Score=47.89 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=35.7
Q ss_pred CEEEEECCccCHHHHHHHHcCCE-EEEEeh-HHHHHHHHHHH
Q 028335 124 KKIVELGSGCGLVGCIAALLGAQ-VILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 124 ~~VLELGcGtGl~~l~la~~g~~-Vv~tD~-~~~l~~~~~N~ 163 (210)
.+||||.||+|.+++.+.+.|.+ |.++|+ +.+++..+.|.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~ 44 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF 44 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC
Confidence 47999999999999999999997 679999 88888888885
No 295
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.04 E-value=0.045 Score=46.03 Aligned_cols=47 Identities=19% Similarity=0.306 Sum_probs=39.9
Q ss_pred cCCCEEEEECCccCHHHHHHHHcCCEEEEEeh-H---HHHHHHHHHHHHhc
Q 028335 121 LHGKKIVELGSGCGLVGCIAALLGAQVILTDL-P---DRLRLLKKNIENNL 167 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~-~---~~l~~~~~N~~~n~ 167 (210)
.++..|||--||+|..++++.++|.+.+++|+ + ..++.+++++...+
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 37889999999999999999999999999999 8 88999988886543
No 296
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=94.51 E-value=0.051 Score=45.02 Aligned_cols=75 Identities=12% Similarity=-0.058 Sum_probs=47.1
Q ss_pred CCCEEEEECCccCHHHHHHHHc-------CCEEEEEeh-HH--------------------------HHHHHHHHHHHhc
Q 028335 122 HGKKIVELGSGCGLVGCIAALL-------GAQVILTDL-PD--------------------------RLRLLKKNIENNL 167 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~-------g~~Vv~tD~-~~--------------------------~l~~~~~N~~~n~ 167 (210)
..++|||+|+..|.-++.++.. +.+|+++|. .. .++.+++|++..+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 4679999999999988887642 457999994 21 3677899998877
Q ss_pred cCCCCCCceEEEEeeCCCCCCCCccCCCCcEEE
Q 028335 168 RHGDLRGSAVVTELTWGDDPDQDLIQPLPDYGN 200 (210)
Q Consensus 168 ~~~~~~~~~~~~~l~w~~~~~~~~~~~~fD~Ii 200 (210)
+. ..++.+..-+..+.... +...+||+|.
T Consensus 186 l~---~~~I~li~Gda~etL~~-~~~~~~d~vf 214 (282)
T 2wk1_A 186 LL---DEQVRFLPGWFKDTLPT-APIDTLAVLR 214 (282)
T ss_dssp CC---STTEEEEESCHHHHSTT-CCCCCEEEEE
T ss_pred CC---cCceEEEEeCHHHHHhh-CCCCCEEEEE
Confidence 52 13455544432221111 1234677654
No 297
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=94.31 E-value=0.064 Score=44.26 Aligned_cols=53 Identities=25% Similarity=0.198 Sum_probs=39.9
Q ss_pred ccEEEeccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc-CC-EEEEEeh
Q 028335 95 TGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL-GA-QVILTDL 152 (210)
Q Consensus 95 tG~~~W~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~-g~-~Vv~tD~ 152 (210)
+|...=.++..|.+...+. .+.++.+|||||||+|-.+..++.. +. +|.+.|+
T Consensus 52 ~~~YrSRaA~KL~ei~ek~-----~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dV 106 (277)
T 3evf_A 52 TGVAVSRGTAKLRWFHERG-----YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTL 106 (277)
T ss_dssp SCBCSSTHHHHHHHHHHTT-----SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECC
T ss_pred CCCccccHHHHHHHHHHhC-----CCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEE
Confidence 3544557888888887752 2446779999999999999988865 44 5888887
No 298
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=94.24 E-value=0.067 Score=44.22 Aligned_cols=54 Identities=24% Similarity=0.229 Sum_probs=39.8
Q ss_pred cEEEeccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc-CC-EEEEEeh-HH
Q 028335 96 GSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL-GA-QVILTDL-PD 154 (210)
Q Consensus 96 G~~~W~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~-g~-~Vv~tD~-~~ 154 (210)
|...=.++..|.+...+. .+.++.+|||||||.|-.+..+++. ++ .|+++|+ .+
T Consensus 69 g~YrSRAAfKL~ei~eK~-----~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d 125 (282)
T 3gcz_A 69 GIAVSRGSAKLRWMEERG-----YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQ 125 (282)
T ss_dssp SBCSSTHHHHHHHHHHTT-----SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT
T ss_pred CCEecHHHHHHHHHHHhc-----CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccC
Confidence 333346788887777653 2457779999999999999988854 54 5899998 44
No 299
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=94.10 E-value=0.05 Score=45.41 Aligned_cols=53 Identities=21% Similarity=0.125 Sum_probs=39.0
Q ss_pred ccEEEeccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc-CC-EEEEEeh
Q 028335 95 TGSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL-GA-QVILTDL 152 (210)
Q Consensus 95 tG~~~W~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~-g~-~Vv~tD~ 152 (210)
+|..+=.++..|-+...+. .+.++.+||||||++|-.+..++.. |+ +|+++|+
T Consensus 72 ~g~y~SR~~~KL~ei~~~~-----~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdv 126 (321)
T 3lkz_A 72 GGHPVSRGTAKLRWLVERR-----FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTK 126 (321)
T ss_dssp SCCCSSTHHHHHHHHHHTT-----SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECC
T ss_pred CCCccchHHHHHHHHHHhc-----CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEc
Confidence 3554546677766665542 2457779999999999999977754 65 5999998
No 300
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=93.99 E-value=0.071 Score=45.93 Aligned_cols=85 Identities=13% Similarity=0.045 Sum_probs=49.3
Q ss_pred CCEEEEECCccCHHHHHHHH--------c----C-----CEEEEEeh-HHHHHHHHHHHHHhccCC-------CCCCceE
Q 028335 123 GKKIVELGSGCGLVGCIAAL--------L----G-----AQVILTDL-PDRLRLLKKNIENNLRHG-------DLRGSAV 177 (210)
Q Consensus 123 ~~~VLELGcGtGl~~l~la~--------~----g-----~~Vv~tD~-~~~l~~~~~N~~~n~~~~-------~~~~~~~ 177 (210)
..+|+|||||+|..++.+.. . + .+|...|+ ....+.+=+++....... .......
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 46899999999999988722 1 1 27899999 444444444433211000 0000111
Q ss_pred EEEeeCCCCCCCCccCCCCcEEEEcceeee
Q 028335 178 VTELTWGDDPDQDLIQPLPDYGNESLLLFL 207 (210)
Q Consensus 178 ~~~l~w~~~~~~~~~~~~fD~Iia~DviY~ 207 (210)
+....=|......+++.+||+|+++=++++
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHW 162 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHW 162 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTB
T ss_pred EEEecChhhhcccCCCcceEEEEecceeee
Confidence 222222344455667889999999877765
No 301
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=93.79 E-value=0.072 Score=43.41 Aligned_cols=32 Identities=22% Similarity=0.046 Sum_probs=25.1
Q ss_pred CCCEEEEECCccCHHHHHHHHc-------C-------CEEEEEeh-H
Q 028335 122 HGKKIVELGSGCGLVGCIAALL-------G-------AQVILTDL-P 153 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~-------g-------~~Vv~tD~-~ 153 (210)
+..+|||+|+|+|+..+.+++. + .+++++|. +
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p 106 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFP 106 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCc
Confidence 3458999999999988886542 2 37999998 6
No 302
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.51 E-value=0.093 Score=43.71 Aligned_cols=40 Identities=15% Similarity=0.142 Sum_probs=34.7
Q ss_pred CEEEEECCccCHHHHHHHHcCCE-EEEEeh-HHHHHHHHHHH
Q 028335 124 KKIVELGSGCGLVGCIAALLGAQ-VILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 124 ~~VLELGcGtGl~~l~la~~g~~-Vv~tD~-~~~l~~~~~N~ 163 (210)
.+||||-||.|.+++.+.+.|.+ |.++|+ +.+.+..+.|.
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~ 42 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNH 42 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHC
Confidence 37999999999999998888987 779999 88888888774
No 303
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=92.47 E-value=0.033 Score=47.77 Aligned_cols=80 Identities=18% Similarity=0.157 Sum_probs=51.5
Q ss_pred CEEEEECCccCHHHHHHHHc------------C------CEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCC
Q 028335 124 KKIVELGSGCGLVGCIAALL------------G------AQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWG 184 (210)
Q Consensus 124 ~~VLELGcGtGl~~l~la~~------------g------~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~ 184 (210)
-+|+||||++|..++.+... + .+|++.|+ ....+.+-+++...... ... .+..-.=|
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~---~~~-~f~~gvpg 128 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDV---DGV-CFINGVPG 128 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSC---TTC-EEEEEEES
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhccc---CCC-EEEEecch
Confidence 47999999999888765443 2 26999999 55666666655432110 012 22233335
Q ss_pred CCCCCCccCCCCcEEEEcceeee
Q 028335 185 DDPDQDLIQPLPDYGNESLLLFL 207 (210)
Q Consensus 185 ~~~~~~~~~~~fD~Iia~DviY~ 207 (210)
......+++.++|+|.++=++.+
T Consensus 129 SFy~rlfp~~S~d~v~Ss~aLHW 151 (359)
T 1m6e_X 129 SFYGRLFPRNTLHFIHSSYSLMW 151 (359)
T ss_dssp CSSSCCSCTTCBSCEEEESCTTB
T ss_pred hhhhccCCCCceEEEEehhhhhh
Confidence 55666777889999998877665
No 304
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=92.31 E-value=0.22 Score=40.43 Aligned_cols=52 Identities=19% Similarity=0.217 Sum_probs=37.5
Q ss_pred cEEEeccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc-CC-EEEEEeh
Q 028335 96 GSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL-GA-QVILTDL 152 (210)
Q Consensus 96 G~~~W~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~-g~-~Vv~tD~ 152 (210)
|...=.++..|-+...+. .+.++.+||||||++|--+..++.. |+ +|++.|+
T Consensus 57 g~yrSRa~~KL~ei~ek~-----~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdv 110 (267)
T 3p8z_A 57 HHAVSRGSAKLQWFVERN-----MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTK 110 (267)
T ss_dssp SCCSSTHHHHHHHHHHTT-----SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECC
T ss_pred CCccchHHHHHHHHHHhc-----CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEec
Confidence 433335666666655542 2457789999999999999977755 55 6999998
No 305
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=92.30 E-value=0.25 Score=41.63 Aligned_cols=42 Identities=19% Similarity=0.172 Sum_probs=35.6
Q ss_pred CCEEEEECCccCHHHHHHHHcCC--E-E-EEEeh-HHHHHHHHHHHH
Q 028335 123 GKKIVELGSGCGLVGCIAALLGA--Q-V-ILTDL-PDRLRLLKKNIE 164 (210)
Q Consensus 123 ~~~VLELGcGtGl~~l~la~~g~--~-V-v~tD~-~~~l~~~~~N~~ 164 (210)
..+++||.||.|.+++.+.+.|. + | .++|+ +.+++..+.|..
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~ 56 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFK 56 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCC
Confidence 34899999999999999988883 5 6 69999 889888888863
No 306
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=91.90 E-value=0.22 Score=41.39 Aligned_cols=42 Identities=17% Similarity=0.131 Sum_probs=35.5
Q ss_pred CCCEEEEECCccCHHHHHHHHcCCE---EEEEeh-HHHHHHHHHHH
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGAQ---VILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~~---Vv~tD~-~~~l~~~~~N~ 163 (210)
...+++||-||.|-+++.+.+.|.+ |.++|. +.+++..+.|.
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~ 60 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH 60 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC
Confidence 4558999999999999999888875 589999 88888777774
No 307
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=91.71 E-value=0.28 Score=41.40 Aligned_cols=40 Identities=33% Similarity=0.366 Sum_probs=34.3
Q ss_pred EEEEECCccCHHHHHHHHcCC--E-EEEEeh-HHHHHHHHHHHH
Q 028335 125 KIVELGSGCGLVGCIAALLGA--Q-VILTDL-PDRLRLLKKNIE 164 (210)
Q Consensus 125 ~VLELGcGtGl~~l~la~~g~--~-Vv~tD~-~~~l~~~~~N~~ 164 (210)
+++||.||.|.+++.+.+.|. + |.++|+ +.+++..+.|..
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~ 48 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP 48 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT
T ss_pred EEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC
Confidence 799999999999999888885 5 789999 888888887753
No 308
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=91.70 E-value=0.23 Score=41.39 Aligned_cols=52 Identities=21% Similarity=0.171 Sum_probs=39.8
Q ss_pred cEEEeccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc-CC-EEEEEeh
Q 028335 96 GSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL-GA-QVILTDL 152 (210)
Q Consensus 96 G~~~W~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~-g~-~Vv~tD~ 152 (210)
|...=.++..|.+...+. .+.++++||||||++|-.+..+++. +. .|+++|+
T Consensus 60 g~yrSRaa~KL~ei~ek~-----l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdl 113 (300)
T 3eld_A 60 GISVSRGAAKIRWLHERG-----YLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTL 113 (300)
T ss_dssp CCCSSTTHHHHHHHHHHT-----SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECC
T ss_pred CCccchHHHHHHHHHHhC-----CCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEe
Confidence 443446788888777652 2457889999999999999999975 54 6899998
No 309
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=90.72 E-value=0.3 Score=41.77 Aligned_cols=41 Identities=39% Similarity=0.587 Sum_probs=32.8
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCC-EEEEEeh-HHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLK 160 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~-~Vv~tD~-~~~l~~~~ 160 (210)
+.++.+||-+|||. |++.+.+++ .|+ +|+++|. ++.++.++
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS 227 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 45788999999986 888887776 488 8999998 77666654
No 310
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=90.64 E-value=0.44 Score=39.69 Aligned_cols=42 Identities=29% Similarity=0.387 Sum_probs=33.7
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
..++.+||-.|+|. |...+.+++ .|++|+++|. ++.++.+++
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 208 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR 208 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 45788999999986 888888776 4889999999 777766654
No 311
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=89.88 E-value=0.39 Score=42.66 Aligned_cols=41 Identities=22% Similarity=0.272 Sum_probs=35.4
Q ss_pred CCEEEEECCccCHHHHHHHHcCCE-EEEEeh-HHHHHHHHHHH
Q 028335 123 GKKIVELGSGCGLVGCIAALLGAQ-VILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 123 ~~~VLELGcGtGl~~l~la~~g~~-Vv~tD~-~~~l~~~~~N~ 163 (210)
.-+++||.||.|-+++.+.+.|.+ |.++|. +.+.+..+.|.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~ 130 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANH 130 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHS
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhc
Confidence 348999999999999998888886 899999 88888888775
No 312
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=89.42 E-value=0.55 Score=39.41 Aligned_cols=42 Identities=40% Similarity=0.627 Sum_probs=32.7
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCC-EEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~-~Vv~tD~-~~~l~~~~~ 161 (210)
+.++.+||-+|+|. |++.+.+++ .|+ +|+++|. ++.++.+++
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 45788999999986 777777776 488 8999998 766666653
No 313
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=89.40 E-value=0.56 Score=39.59 Aligned_cols=42 Identities=36% Similarity=0.542 Sum_probs=33.1
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCC-EEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~-~Vv~tD~-~~~l~~~~~ 161 (210)
+.++.+||-+|||. |++.+.+++ .|+ +|+++|. ++.++.+++
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 45788999999986 777777776 488 6999998 777777654
No 314
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=89.29 E-value=0.56 Score=39.99 Aligned_cols=42 Identities=40% Similarity=0.547 Sum_probs=33.3
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCC-EEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~-~Vv~tD~-~~~l~~~~~ 161 (210)
+.++.+||-+|||. |++++.+++ .|+ +|+++|. ++.++.+++
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 45788999999876 888888876 488 7999998 777777654
No 315
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.15 E-value=0.59 Score=39.23 Aligned_cols=44 Identities=27% Similarity=0.359 Sum_probs=33.9
Q ss_pred CCEEEEECCcc-C-HHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHh
Q 028335 123 GKKIVELGSGC-G-LVGCIAALLGAQVILTDL-PDRLRLLKKNIENN 166 (210)
Q Consensus 123 ~~~VLELGcGt-G-l~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n 166 (210)
..+|-=||||+ | -++..++..|.+|+..|. ++.++.+..++..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~ 52 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKE 52 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHH
Confidence 45799999997 4 466677788999999999 88877776666543
No 316
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=88.22 E-value=0.76 Score=38.70 Aligned_cols=42 Identities=33% Similarity=0.433 Sum_probs=32.9
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+.++.+||=+|+|. |+..+.+++ .|++|+++|. ++-++.+++
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA 231 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Confidence 45788999999886 777777776 4899999998 776666654
No 317
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=88.00 E-value=0.64 Score=39.46 Aligned_cols=40 Identities=15% Similarity=0.153 Sum_probs=34.4
Q ss_pred cCCCEEEEECCccCHHHHHHHHc-C--CEEEEEeh-HHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAALL-G--AQVILTDL-PDRLRLLK 160 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~~-g--~~Vv~tD~-~~~l~~~~ 160 (210)
.++..++|..||.|--+..+++. + .+|+++|+ +.+++.++
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 46889999999999999988865 4 48999999 99998874
No 318
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=87.96 E-value=0.8 Score=38.31 Aligned_cols=41 Identities=39% Similarity=0.599 Sum_probs=32.0
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~ 160 (210)
+.++.+||-+|+|. |...+.+++ .|++|+++|. ++.++.++
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~ 209 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK 209 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 45788999999875 777777775 4889999998 77776665
No 319
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=87.85 E-value=0.48 Score=39.61 Aligned_cols=42 Identities=21% Similarity=0.237 Sum_probs=32.7
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+.++.+||=+|+|. |++.+.+++ .|++|+++|. ++-++.+++
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 218 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS 218 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh
Confidence 45788999999976 777777776 4889999998 666666654
No 320
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.59 E-value=0.61 Score=39.52 Aligned_cols=42 Identities=29% Similarity=0.317 Sum_probs=32.7
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+.++.+||-+|+|. |++.+.+++ .|++|+++|. ++.++.+++
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45788999999986 777777775 4889999998 776766654
No 321
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=87.20 E-value=0.67 Score=38.78 Aligned_cols=42 Identities=19% Similarity=0.287 Sum_probs=33.2
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHHc-CC-EEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAALL-GA-QVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~~-g~-~Vv~tD~-~~~l~~~~~ 161 (210)
+.++.+||=+|+|. |++++.+++. |+ +|+++|. ++.++.+++
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 209 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE 209 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 45788999999986 7777777765 87 7999999 776776655
No 322
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=87.01 E-value=0.7 Score=38.98 Aligned_cols=42 Identities=19% Similarity=0.302 Sum_probs=32.4
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHHc-CC-EEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAALL-GA-QVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~~-g~-~Vv~tD~-~~~l~~~~~ 161 (210)
+.++.+||=+|+|. |++.+.+++. |+ +|+++|. ++.++.+++
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 45788999999876 7777777764 88 8999998 766666653
No 323
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=86.54 E-value=3.4 Score=33.28 Aligned_cols=60 Identities=20% Similarity=0.303 Sum_probs=42.7
Q ss_pred ccCCCEEEEECCccCH---HHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl---~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.+++|.+|==|++.|+ ++..+++.|++|+.+|. ++.++.+.+.+...+. ++.+...|..+
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~------~~~~~~~Dvt~ 67 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK------EVLGVKADVSK 67 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC------CEEEEECCTTS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC------cEEEEEccCCC
Confidence 3689999999988874 33445567999999999 7877777777765542 35555666443
No 324
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=86.40 E-value=0.68 Score=38.90 Aligned_cols=42 Identities=24% Similarity=0.296 Sum_probs=32.6
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+.++.+||-+|+|. |+..+.+++ +|++|+++|. ++-++.+++
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK 221 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 45788999999965 777777775 4889999998 666666654
No 325
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=86.12 E-value=0.87 Score=38.20 Aligned_cols=43 Identities=30% Similarity=0.527 Sum_probs=34.0
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHHc-CCE-EEEEeh-HHHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAALL-GAQ-VILTDL-PDRLRLLKKN 162 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~~-g~~-Vv~tD~-~~~l~~~~~N 162 (210)
+.++.+||=+|+|. |.+++.+++. |++ |+++|. ++-++.+++.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 45788999999976 7777777764 886 999998 7777777764
No 326
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=86.02 E-value=0.85 Score=38.50 Aligned_cols=41 Identities=29% Similarity=0.543 Sum_probs=31.6
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCC-EEEEEeh-HHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLK 160 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~-~Vv~tD~-~~~l~~~~ 160 (210)
..++.+||-+|+|. |++.+.+++ .|+ +|+++|. ++-++.++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 237 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK 237 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 45788999999876 777777776 488 8999998 66666654
No 327
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=85.70 E-value=1.1 Score=38.20 Aligned_cols=42 Identities=36% Similarity=0.487 Sum_probs=32.9
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCC-EEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~-~Vv~tD~-~~~l~~~~~ 161 (210)
+.++.+||=+|+|. |++++.+++ .|+ +|+++|. ++-++++++
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 256 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE 256 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 45788999999976 777777776 488 8999998 777777654
No 328
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=85.66 E-value=0.91 Score=38.29 Aligned_cols=41 Identities=32% Similarity=0.565 Sum_probs=31.7
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCC-EEEEEeh-HHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLK 160 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~-~Vv~tD~-~~~l~~~~ 160 (210)
+.++.+||-+|+|. |++.+.+++ +|+ +|+++|. ++.++.++
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~ 234 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK 234 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 45788999999876 777777776 488 8999998 76666665
No 329
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=85.37 E-value=1.4 Score=36.56 Aligned_cols=41 Identities=29% Similarity=0.419 Sum_probs=31.6
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~ 160 (210)
..++++||-+|+|. |...+.+++ .|++|+++|. ++.++.++
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 205 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK 205 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 45788999999975 666666665 4889999998 77666664
No 330
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=85.17 E-value=1.3 Score=37.45 Aligned_cols=42 Identities=33% Similarity=0.496 Sum_probs=32.9
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCC-EEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~-~Vv~tD~-~~~l~~~~~ 161 (210)
+.++.+||=+|+|. |.+++.+++ .|+ +|+++|. ++.++++++
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 225 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE 225 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 45788999999976 777777776 488 8999999 777776655
No 331
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=85.15 E-value=0.85 Score=37.26 Aligned_cols=43 Identities=26% Similarity=0.267 Sum_probs=29.7
Q ss_pred cEEEeccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHc
Q 028335 96 GSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALL 143 (210)
Q Consensus 96 G~~~W~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~ 143 (210)
|...=.++..|-+.-.+ ..+.++.+||||||+.|-=+..++++
T Consensus 52 g~yRSRAayKL~EIdeK-----~likpg~~VVDLGaAPGGWSQvAa~~ 94 (269)
T 2px2_A 52 GHPVSRGTAKLRWLVER-----RFVQPIGKVVDLGCGRGGWSYYAATM 94 (269)
T ss_dssp SCCSSTHHHHHHHHHHT-----TSCCCCEEEEEETCTTSHHHHHHTTS
T ss_pred CCcccHHHHHHHHHHHc-----CCCCCCCEEEEcCCCCCHHHHHHhhh
Confidence 43333556555544433 23456889999999999999999886
No 332
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=85.11 E-value=1 Score=37.96 Aligned_cols=42 Identities=29% Similarity=0.396 Sum_probs=32.1
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCC-EEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~-~Vv~tD~-~~~l~~~~~ 161 (210)
..++.+||-+|+|. |++.+.+++ .|+ +|+++|. ++.++.+++
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 45788999999876 777777776 488 8999998 776666653
No 333
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=84.74 E-value=1.3 Score=36.91 Aligned_cols=40 Identities=8% Similarity=0.009 Sum_probs=32.0
Q ss_pred CCCEEEEECCcc-CHHHHHHHH-c--CCEEEEEeh-HHHHHHHHH
Q 028335 122 HGKKIVELGSGC-GLVGCIAAL-L--GAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 122 ~~~~VLELGcGt-Gl~~l~la~-~--g~~Vv~tD~-~~~l~~~~~ 161 (210)
++.+||-+|+|. |+..+.+++ . |++|+++|. ++-++.+++
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE 214 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH
Confidence 889999999975 777777775 5 889999998 776666654
No 334
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=84.61 E-value=0.7 Score=39.13 Aligned_cols=41 Identities=27% Similarity=0.392 Sum_probs=32.1
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHHc-CC-EEEEEeh-HHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAALL-GA-QVILTDL-PDRLRLLK 160 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~~-g~-~Vv~tD~-~~~l~~~~ 160 (210)
+.++.+||=+|+|. |++.+.+++. |+ +|+++|. ++-++.++
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~ 235 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK 235 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 45788999999976 7777777764 88 7999998 77666665
No 335
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=84.46 E-value=1.3 Score=37.42 Aligned_cols=41 Identities=41% Similarity=0.672 Sum_probs=31.8
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cC-CEEEEEeh-HHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LG-AQVILTDL-PDRLRLLK 160 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g-~~Vv~tD~-~~~l~~~~ 160 (210)
+.++.+||-+|+|. |+..+.+++ .| ++|+++|. ++-++.++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~ 237 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE 237 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH
Confidence 45688999999875 777777776 48 59999998 77666665
No 336
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=84.38 E-value=1.1 Score=37.70 Aligned_cols=41 Identities=27% Similarity=0.415 Sum_probs=31.5
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-cCC-EEEEEeh-HHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLK 160 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~g~-~Vv~tD~-~~~l~~~~ 160 (210)
+.++.+||-+|+|. |.+.+.+++ .|+ +|+++|. ++.++.++
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~ 233 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK 233 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 45788999999876 777777775 488 8999998 76666664
No 337
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=84.07 E-value=1.7 Score=36.09 Aligned_cols=42 Identities=40% Similarity=0.504 Sum_probs=33.1
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHHc--CCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAALL--GAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~~--g~~Vv~tD~-~~~l~~~~~ 161 (210)
..++.+||=+|+|. |+.++.+++. +++|+++|. ++-++.+++
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE 214 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 45788999999986 8887877764 679999999 777776654
No 338
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=83.56 E-value=1.1 Score=41.78 Aligned_cols=40 Identities=25% Similarity=0.235 Sum_probs=33.3
Q ss_pred CEEEEECCccCHHHHHHHHcC------CE-EEEEeh-HHHHHHHHHHH
Q 028335 124 KKIVELGSGCGLVGCIAALLG------AQ-VILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 124 ~~VLELGcGtGl~~l~la~~g------~~-Vv~tD~-~~~l~~~~~N~ 163 (210)
.+||||-||+|-+++-+.+.| .+ +.++|. +.+++..+.|.
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 479999999998888777665 34 789999 89999888884
No 339
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=83.47 E-value=2 Score=36.99 Aligned_cols=42 Identities=26% Similarity=0.358 Sum_probs=36.2
Q ss_pred CCCEEEEECCccCHHHHHHHHcC-CEEEEEeh-HHHHHHHHHHH
Q 028335 122 HGKKIVELGSGCGLVGCIAALLG-AQVILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g-~~Vv~tD~-~~~l~~~~~N~ 163 (210)
+.++||=||.|.|...-.+.+.. .+|+.+|+ +.+++.+++-+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yf 248 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYM 248 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhc
Confidence 56899999999998888887754 47999999 99999999865
No 340
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=83.23 E-value=6.2 Score=33.46 Aligned_cols=67 Identities=15% Similarity=0.145 Sum_probs=46.7
Q ss_pred cEEEeccHHHHHHHHhhhhhcCccccCCCEEEEECCccCHHHHHHHHcCCEEEEEehHHHHHHHHHHHHHhccC
Q 028335 96 GSVMWDSGVVLGKFLEHAVDSGMLLLHGKKIVELGSGCGLVGCIAALLGAQVILTDLPDRLRLLKKNIENNLRH 169 (210)
Q Consensus 96 G~~~W~aa~~la~~L~~~~~~~~~~~~~~~VLELGcGtGl~~l~la~~g~~Vv~tD~~~~l~~~~~N~~~n~~~ 169 (210)
..+-|+++- +||.++.... ..+.+||-++.+.|.+++.++..+.. ..+|---....++.|++.|++.
T Consensus 18 ~l~a~da~d---~~ll~~~~~~---~~~~~~~~~~d~~gal~~~~~~~~~~-~~~ds~~~~~~~~~n~~~~~~~ 84 (375)
T 4dcm_A 18 PLQAWEAAD---EYLLQQLDDT---EIRGPVLILNDAFGALSCALAEHKPY-SIGDSYISELATRENLRLNGID 84 (375)
T ss_dssp SCCSCCHHH---HHHHHTTTTC---CCCSCEEEECCSSSHHHHHTGGGCCE-EEESCHHHHHHHHHHHHHTTCC
T ss_pred CCCccchHH---HHHHHhhhhc---cCCCCEEEECCCCCHHHHhhccCCce-EEEhHHHHHHHHHHHHHHcCCC
Confidence 356799986 5666553211 24568999999999999888765442 3357534456789999999875
No 341
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=82.77 E-value=2 Score=35.98 Aligned_cols=41 Identities=27% Similarity=0.424 Sum_probs=31.9
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-c-CCEEEEEeh-HHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-L-GAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~-g~~Vv~tD~-~~~l~~~~ 160 (210)
+.++.+||=+|+|. |++.+.+++ . |++|+++|. ++-++.++
T Consensus 184 ~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~ 228 (359)
T 1h2b_A 184 LYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE 228 (359)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 45788999999975 666666665 5 889999998 77666665
No 342
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=82.65 E-value=1.8 Score=35.72 Aligned_cols=42 Identities=31% Similarity=0.381 Sum_probs=31.8
Q ss_pred ccCCCEEEEEC-Ccc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELG-SGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELG-cGt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+.++++||=.| +|. |...+.+++ .|++|+++|. ++-++.+++
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 183 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA 183 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45788999999 443 777777665 4899999998 777776654
No 343
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=82.61 E-value=1.3 Score=36.97 Aligned_cols=40 Identities=40% Similarity=0.534 Sum_probs=31.0
Q ss_pred CCCEEEEECCcc-CHHHHHHHH-cCC-EEEEEeh-HHHHHHHHH
Q 028335 122 HGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKK 161 (210)
Q Consensus 122 ~~~~VLELGcGt-Gl~~l~la~-~g~-~Vv~tD~-~~~l~~~~~ 161 (210)
++.+||-+|+|. |...+.+++ .|+ +|+++|. ++.++.+++
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~ 210 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK 210 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 889999999965 666666665 488 8999998 776666653
No 344
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=82.20 E-value=1.9 Score=35.67 Aligned_cols=42 Identities=21% Similarity=0.340 Sum_probs=31.4
Q ss_pred ccCCCEEEEECC-cc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGS-GC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGc-Gt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
..++++||=.|+ |. |...+.+++ .|++|+++|. ++-++.+++
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 191 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE 191 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 457889999994 43 777776665 4889999999 776666654
No 345
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=81.99 E-value=2 Score=41.56 Aligned_cols=41 Identities=15% Similarity=0.184 Sum_probs=34.9
Q ss_pred CCEEEEECCccCHHHHHHHHcCC-E-EEEEeh-HHHHHHHHHHH
Q 028335 123 GKKIVELGSGCGLVGCIAALLGA-Q-VILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 123 ~~~VLELGcGtGl~~l~la~~g~-~-Vv~tD~-~~~l~~~~~N~ 163 (210)
..++|||.||.|.+++.+.+.|. + |.++|+ +.++...+.|.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~ 583 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN 583 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC
Confidence 34899999999999999988897 5 789999 88888777774
No 346
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=81.90 E-value=2.3 Score=35.19 Aligned_cols=42 Identities=38% Similarity=0.501 Sum_probs=30.4
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHH-c-CCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAAL-L-GAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~-~-g~~Vv~tD~-~~~l~~~~~ 161 (210)
..++.+||=+|+|. |.+.+.+++ . +++|+++|. ++-++++++
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~ 206 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK 206 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh
Confidence 45788999999987 555555554 3 679999999 766655543
No 347
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=81.83 E-value=2 Score=36.02 Aligned_cols=42 Identities=26% Similarity=0.277 Sum_probs=32.1
Q ss_pred ccCCCEEEEEC-Ccc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELG-SGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELG-cGt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+.++++||-.| +|. |...+.+++ .|++|+++|. ++.++.+++
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 45788999999 454 887777775 4889999998 676666654
No 348
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=81.20 E-value=2.1 Score=35.59 Aligned_cols=40 Identities=30% Similarity=0.458 Sum_probs=31.0
Q ss_pred CCCEEEEE-CCcc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 122 HGKKIVEL-GSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 122 ~~~~VLEL-GcGt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
++.+||=. |+|. |+..+.+++ .|++|+++|. ++-++.+++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 193 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK 193 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 68899999 5654 777777775 4889999999 777777665
No 349
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=81.09 E-value=1.7 Score=36.38 Aligned_cols=39 Identities=23% Similarity=0.221 Sum_probs=29.9
Q ss_pred CCCEEEEECCcc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHH
Q 028335 122 HGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 122 ~~~~VLELGcGt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~ 160 (210)
++.+||=+|+|. |+..+.+++ .|++|+++|. ++-++.++
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~ 221 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEAL 221 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Confidence 788999999875 777776665 4889999998 66555554
No 350
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=80.97 E-value=1.7 Score=32.87 Aligned_cols=41 Identities=20% Similarity=0.316 Sum_probs=28.3
Q ss_pred ccCCCEEEEECCc--cCHHHHHHHH-cCCEEEEEeh-HHHHHHHH
Q 028335 120 LLHGKKIVELGSG--CGLVGCIAAL-LGAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 120 ~~~~~~VLELGcG--tGl~~l~la~-~g~~Vv~tD~-~~~l~~~~ 160 (210)
+.++++||-.|++ .|...+.+++ .|++|+++|. ++.++.++
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS 80 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4578899999953 3554444443 5899999999 66655543
No 351
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=80.47 E-value=1.4 Score=36.54 Aligned_cols=42 Identities=14% Similarity=0.117 Sum_probs=32.2
Q ss_pred ccCCCEEEEECCcc--CHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC--GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt--Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+.++++||-.|+|. |...+.+++ .|++|+++|. ++.++.+++
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR 187 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 45789999999973 666666665 4899999998 666666654
No 352
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=80.17 E-value=2.9 Score=34.69 Aligned_cols=42 Identities=29% Similarity=0.405 Sum_probs=32.2
Q ss_pred ccCCCEEEEECC--ccCHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGS--GCGLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGc--GtGl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+.++++||-.|+ |.|...+.+++ .|++|+++|. ++.++.+++
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 457889999998 34777777665 5889999999 777776653
No 353
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=80.06 E-value=1.9 Score=35.92 Aligned_cols=42 Identities=29% Similarity=0.402 Sum_probs=32.0
Q ss_pred ccCCCEEEEECC-c-cCHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGc-G-tGl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+.++++||=.|+ | .|...+.+++ .|++|++++. ++.++.+++
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 202 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS 202 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 457889999998 4 3777777775 4899999998 766666654
No 354
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=79.85 E-value=2.6 Score=34.72 Aligned_cols=40 Identities=18% Similarity=0.209 Sum_probs=29.2
Q ss_pred ccCCCEEEEECC--ccCHHHHHHHH-cCCEEEEEeh-HHHHHHH
Q 028335 120 LLHGKKIVELGS--GCGLVGCIAAL-LGAQVILTDL-PDRLRLL 159 (210)
Q Consensus 120 ~~~~~~VLELGc--GtGl~~l~la~-~g~~Vv~tD~-~~~l~~~ 159 (210)
..++++||-.|| |.|...+.+++ .|++|+++|. ++.++.+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~ 186 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL 186 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 457889999998 33655555554 5889999998 6666655
No 355
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=79.81 E-value=2.1 Score=36.17 Aligned_cols=41 Identities=20% Similarity=0.264 Sum_probs=29.2
Q ss_pred cCCCEEEEECCccCHHHHH---HHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCI---AAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~---la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
.++.+||=+|+|+|.+|+. +++ .|++|+++|. ++-++.+++
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 214 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA 214 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh
Confidence 4788999996665555554 444 3889999998 776766654
No 356
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=79.58 E-value=2.1 Score=35.90 Aligned_cols=39 Identities=15% Similarity=0.311 Sum_probs=28.9
Q ss_pred CCEEEEECCcc-CHHHHHHHH-cCCEEEEEeh-H---HHHHHHHH
Q 028335 123 GKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-P---DRLRLLKK 161 (210)
Q Consensus 123 ~~~VLELGcGt-Gl~~l~la~-~g~~Vv~tD~-~---~~l~~~~~ 161 (210)
+++||=+|+|. |...+.+++ .|++|+++|. + +-++.+++
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~ 225 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE 225 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH
Confidence 89999999954 665555554 4889999998 6 66665543
No 357
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=79.30 E-value=1.5 Score=35.72 Aligned_cols=41 Identities=24% Similarity=0.390 Sum_probs=30.8
Q ss_pred ccCCCEEEEECC-c-cCHHHHHHHH-cCCEEEEEeh-HHHHHHHH
Q 028335 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 120 ~~~~~~VLELGc-G-tGl~~l~la~-~g~~Vv~tD~-~~~l~~~~ 160 (210)
+.++++||-+|+ | .|...+.+++ .|++|+++|. ++.++.++
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 167 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL 167 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 457889999998 4 3777777665 4889999998 66665554
No 358
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=79.13 E-value=1.9 Score=36.31 Aligned_cols=40 Identities=25% Similarity=0.322 Sum_probs=32.2
Q ss_pred CCCEEEEEC-Ccc-CHHHHHHHHc--CCEEEEEeh-HHHHHHHHH
Q 028335 122 HGKKIVELG-SGC-GLVGCIAALL--GAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 122 ~~~~VLELG-cGt-Gl~~l~la~~--g~~Vv~tD~-~~~l~~~~~ 161 (210)
++.+||=.| +|. |.+.+.+++. |++|+++|. ++-++.+++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~ 215 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS 215 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH
Confidence 577999999 665 8888888874 779999999 777776654
No 359
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=79.11 E-value=14 Score=29.57 Aligned_cols=77 Identities=19% Similarity=0.180 Sum_probs=44.6
Q ss_pred ccccCCCEEEEECCccCH---HHHHHHHcCCEEEEEehHHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCC--CCcc
Q 028335 118 MLLLHGKKIVELGSGCGL---VGCIAALLGAQVILTDLPDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPD--QDLI 192 (210)
Q Consensus 118 ~~~~~~~~VLELGcGtGl---~~l~la~~g~~Vv~tD~~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~--~~~~ 192 (210)
+..++|+.+|==|++.|+ ++..+++.|++|+.+|.... +.+.+.+...+ .++.....|..+... ..+.
T Consensus 4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~-~~~~~~~~~~g------~~~~~~~~Dv~d~~~v~~~~~ 76 (247)
T 4hp8_A 4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP-DETLDIIAKDG------GNASALLIDFADPLAAKDSFT 76 (247)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC-HHHHHHHHHTT------CCEEEEECCTTSTTTTTTSST
T ss_pred CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH-HHHHHHHHHhC------CcEEEEEccCCCHHHHHHHHH
Confidence 345789999999988874 34445667999999998211 12223333333 235556666554322 1223
Q ss_pred CCCCcEEEE
Q 028335 193 QPLPDYGNE 201 (210)
Q Consensus 193 ~~~fD~Iia 201 (210)
..+.|++|.
T Consensus 77 ~g~iDiLVN 85 (247)
T 4hp8_A 77 DAGFDILVN 85 (247)
T ss_dssp TTCCCEEEE
T ss_pred hCCCCEEEE
Confidence 356777664
No 360
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=79.10 E-value=1.6 Score=35.74 Aligned_cols=42 Identities=19% Similarity=0.090 Sum_probs=31.3
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHHc-CCEEEEEehHHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAALL-GAQVILTDLPDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~~-g~~Vv~tD~~~~l~~~~~ 161 (210)
..++.+||=+|+|. |.+.+.+++. |++|++++-++-++.+++
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~ 183 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVSASLSQALAAK 183 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEChhhHHHHHH
Confidence 45789999999975 7777777764 899999995334555544
No 361
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=78.91 E-value=10 Score=29.80 Aligned_cols=61 Identities=25% Similarity=0.326 Sum_probs=39.8
Q ss_pred ccCCCEEEEECC-ccCH---HHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 120 LLHGKKIVELGS-GCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 120 ~~~~~~VLELGc-GtGl---~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.++++++|=.|+ |.|+ +...+++.|++|+++|. ...++.+.+.+..... .++.+...|..+
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dl~~ 84 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGL-----GRVEAVVCDVTS 84 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCS-----SCEEEEECCTTC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCC-----CceEEEEeCCCC
Confidence 357889999998 6664 33345566999999999 6666666555543321 346666666544
No 362
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=78.69 E-value=2.3 Score=35.40 Aligned_cols=42 Identities=24% Similarity=0.341 Sum_probs=30.3
Q ss_pred ccCCCEEEEECC--ccCHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGS--GCGLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGc--GtGl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
..++++||-.|+ |.|...+.+++ .|++|+++|. ++.++.+++
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS 212 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH
Confidence 457889999998 34666666554 5889999998 666555543
No 363
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=78.24 E-value=3 Score=36.08 Aligned_cols=43 Identities=12% Similarity=-0.085 Sum_probs=34.7
Q ss_pred CCEEEEECCccCHHHHHHHHcCC---E----EEEEeh-HHHHHHHHHHHHH
Q 028335 123 GKKIVELGSGCGLVGCIAALLGA---Q----VILTDL-PDRLRLLKKNIEN 165 (210)
Q Consensus 123 ~~~VLELGcGtGl~~l~la~~g~---~----Vv~tD~-~~~l~~~~~N~~~ 165 (210)
..+|+||.||.|-+++.+.+.|. - |.++|. +.++...+.|...
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 34899999999988888877762 2 788999 8888888888643
No 364
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=78.16 E-value=2.6 Score=36.56 Aligned_cols=42 Identities=24% Similarity=0.352 Sum_probs=32.4
Q ss_pred ccCCCEEEEECC-cc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGS-GC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGc-Gt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+.++.+||=+|+ |. |++++.+++ .|++|++++. ++-++.+++
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~ 271 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRA 271 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHh
Confidence 457889999998 54 777777776 4899999988 766776654
No 365
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=77.49 E-value=2.4 Score=35.00 Aligned_cols=40 Identities=28% Similarity=0.358 Sum_probs=30.3
Q ss_pred ccCCCEEEEECC-c-cCHHHHHHHH-cCCEEEEEeh-HHHHHHH
Q 028335 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLL 159 (210)
Q Consensus 120 ~~~~~~VLELGc-G-tGl~~l~la~-~g~~Vv~tD~-~~~l~~~ 159 (210)
+.++++||-.|+ | .|...+.+++ .|++|+++|. ++-++.+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 190 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFL 190 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 457899999998 3 3776666665 4889999998 7666655
No 366
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=77.29 E-value=4.8 Score=33.73 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=34.8
Q ss_pred CCCEEEEECCccCHHHHHHHHc--CCEEEEEehHHHHHHHHHHHHHh
Q 028335 122 HGKKIVELGSGCGLVGCIAALL--GAQVILTDLPDRLRLLKKNIENN 166 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~--g~~Vv~tD~~~~l~~~~~N~~~n 166 (210)
+.+.|+.||||.......+... +.+++=+|.|+++..-++-+..+
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~ 143 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRES 143 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHS
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhc
Confidence 4568999999999888888764 44688888888887766666554
No 367
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=77.14 E-value=3.3 Score=34.54 Aligned_cols=42 Identities=21% Similarity=0.276 Sum_probs=30.9
Q ss_pred ccCCCEEEEEC-Ccc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELG-SGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELG-cGt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+.++++||=.| +|. |...+.+++ .|++|+++|. ++.++.+++
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 210 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER 210 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 45788999995 343 776666665 4899999998 777766654
No 368
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=77.07 E-value=27 Score=28.00 Aligned_cols=41 Identities=27% Similarity=0.289 Sum_probs=28.1
Q ss_pred ccCCCEEEEECCccCHHHHHHHH----cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGCGLVGCIAAL----LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~----~g~~Vv~tD~-~~~l~~~~~ 161 (210)
..++++||=.|+ +|.+|..+++ .|.+|++++. ....+.+..
T Consensus 8 ~~~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~ 53 (342)
T 1y1p_A 8 LPEGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQK 53 (342)
T ss_dssp SCTTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHH
Confidence 457789998886 4667766553 4889999998 554444433
No 369
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=76.93 E-value=5.4 Score=32.08 Aligned_cols=48 Identities=31% Similarity=0.286 Sum_probs=35.2
Q ss_pred ccCCCEEEEECCccCH---HHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhc
Q 028335 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNL 167 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl---~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~ 167 (210)
.++|+.+|==|++.|+ ++..+++.|++|+.+|. ++.++.+.+.+...+
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g 57 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG 57 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence 4689999999988763 33445566999999999 777766666665544
No 370
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=76.79 E-value=4.1 Score=33.78 Aligned_cols=42 Identities=26% Similarity=0.400 Sum_probs=31.0
Q ss_pred ccCCCEEEEECCcc--CHHHHHHHH-c-CCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC--GLVGCIAAL-L-GAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt--Gl~~l~la~-~-g~~Vv~tD~-~~~l~~~~~ 161 (210)
..++++||-.|+|. |...+.+++ . |++|+++|. ++.++.+++
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR 214 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 45788999999983 555555554 5 899999998 777666643
No 371
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=76.64 E-value=3.6 Score=29.14 Aligned_cols=37 Identities=22% Similarity=0.359 Sum_probs=25.7
Q ss_pred CCCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHH
Q 028335 122 HGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~ 160 (210)
..++|+=+|+|. +|..++ +.|.+|+++|. ++.++.++
T Consensus 5 ~~~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~ 46 (141)
T 3llv_A 5 GRYEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLE 46 (141)
T ss_dssp -CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Confidence 346789999854 555444 45889999999 77665554
No 372
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=76.46 E-value=3 Score=34.47 Aligned_cols=41 Identities=22% Similarity=0.273 Sum_probs=30.6
Q ss_pred ccCCCEEEEECC-c-cCHHHHHHHH-cCCEEEEEeh-HHHHHHHH
Q 028335 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 120 ~~~~~~VLELGc-G-tGl~~l~la~-~g~~Vv~tD~-~~~l~~~~ 160 (210)
+.++++||-.|+ | .|...+.+++ .|++|+++|. ++.++.++
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~ 197 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLK 197 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 457889999997 3 3766666665 5889999998 66666654
No 373
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=76.42 E-value=1.1 Score=37.25 Aligned_cols=40 Identities=30% Similarity=0.581 Sum_probs=30.6
Q ss_pred CCCEEEEECCcc-CHHHHHHHH-cCC-EEEEEeh-HHHHHHHHH
Q 028335 122 HGKKIVELGSGC-GLVGCIAAL-LGA-QVILTDL-PDRLRLLKK 161 (210)
Q Consensus 122 ~~~~VLELGcGt-Gl~~l~la~-~g~-~Vv~tD~-~~~l~~~~~ 161 (210)
++.+||-+|+|. |...+.+++ .|+ +|+++|. ++-++.+++
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~ 207 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP 207 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 889999999965 777777775 488 8999998 666555543
No 374
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=76.12 E-value=3.9 Score=40.72 Aligned_cols=42 Identities=14% Similarity=0.177 Sum_probs=35.7
Q ss_pred CCCEEEEECCccCHHHHHHHHcCC-E-EEEEeh-HHHHHHHHHHH
Q 028335 122 HGKKIVELGSGCGLVGCIAALLGA-Q-VILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~g~-~-Vv~tD~-~~~l~~~~~N~ 163 (210)
+..++|||.||.|.+++.+.+.|. + +.++|+ +.+++..+.|.
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~ 894 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNN 894 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHC
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC
Confidence 345899999999999999988896 4 789999 88888888774
No 375
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=75.88 E-value=5.3 Score=32.47 Aligned_cols=39 Identities=36% Similarity=0.479 Sum_probs=29.8
Q ss_pred CEEEEECCcc-C-HHHHHHHHcCCEEEEEeh-HHHHHHHHHH
Q 028335 124 KKIVELGSGC-G-LVGCIAALLGAQVILTDL-PDRLRLLKKN 162 (210)
Q Consensus 124 ~~VLELGcGt-G-l~~l~la~~g~~Vv~tD~-~~~l~~~~~N 162 (210)
++|.=+|+|. | .++..+++.|.+|++.|. ++.++.++..
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~ 57 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG 57 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 5799999987 5 366667777999999999 7777665443
No 376
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=75.72 E-value=3.9 Score=33.53 Aligned_cols=42 Identities=24% Similarity=0.267 Sum_probs=30.8
Q ss_pred ccCCCEEEEEC-Ccc-CHHHHHHHHc-CCEEEEEehHHHHHHHHH
Q 028335 120 LLHGKKIVELG-SGC-GLVGCIAALL-GAQVILTDLPDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELG-cGt-Gl~~l~la~~-g~~Vv~tD~~~~l~~~~~ 161 (210)
..++.+||=+| +|. |++.+.+++. |++|++++.++-++.+++
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~ 194 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKA 194 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHH
Confidence 45788999997 665 8888877764 889999987443555543
No 377
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=75.54 E-value=16 Score=29.83 Aligned_cols=60 Identities=17% Similarity=0.227 Sum_probs=39.6
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
+.+++||=-|++.|+ |.. +++.|++|++++. .+.++.+...+...+.. ..+.+..+|..+
T Consensus 6 l~~k~vlVTGas~gI-G~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~Dl~~ 70 (319)
T 3ioy_A 6 FAGRTAFVTGGANGV-GIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSG----PEVMGVQLDVAS 70 (319)
T ss_dssp CTTCEEEEETTTSTH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCG----GGEEEEECCTTC
T ss_pred CCCCEEEEcCCchHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC----CeEEEEECCCCC
Confidence 578899999988664 443 3445999999999 77676666666554321 245566666543
No 378
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=75.36 E-value=4.7 Score=33.24 Aligned_cols=42 Identities=31% Similarity=0.520 Sum_probs=31.5
Q ss_pred ccCCCEEEEECCcc-CHHHHHHHHc-CC-EEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAALL-GA-QVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la~~-g~-~Vv~tD~-~~~l~~~~~ 161 (210)
..++.+||=.|+|. |.+++.+++. |+ .++++|. ++-++++++
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~ 203 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS 203 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH
Confidence 45788999999986 7777777754 66 4789998 776766654
No 379
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=75.35 E-value=3.1 Score=34.92 Aligned_cols=39 Identities=28% Similarity=0.344 Sum_probs=29.1
Q ss_pred CCCEEEEECCcc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHH
Q 028335 122 HGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 122 ~~~~VLELGcGt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~ 160 (210)
++.+||=+|+|. |...+.+++ .|++|+++|. ++.++.++
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 228 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL 228 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 788999999865 666666665 4889999998 66555544
No 380
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=75.25 E-value=19 Score=28.35 Aligned_cols=60 Identities=27% Similarity=0.290 Sum_probs=40.3
Q ss_pred ccCCCEEEEECCccCH---HHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 120 LLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl---~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.++++++|=-|++.|+ ++..+++.|++|+++|. .+.++.+.+.+...+ .++.+...|..+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~ 71 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG------RRALSVGTDITD 71 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTC
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEcCCCC
Confidence 3678999999988763 23334556999999999 777666666655443 235566666544
No 381
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=74.96 E-value=4.3 Score=33.85 Aligned_cols=41 Identities=22% Similarity=0.435 Sum_probs=29.8
Q ss_pred ccCCCEEEEECC-c-cCHHHHHHHH-cCCEEEEEeh-HHHHHHHH
Q 028335 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 120 ~~~~~~VLELGc-G-tGl~~l~la~-~g~~Vv~tD~-~~~l~~~~ 160 (210)
+.++++||-.|+ | .|...+.+++ .|++|+++|. ++.++.++
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 212 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL 212 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Confidence 457889999997 3 3666666554 5889999998 66666543
No 382
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=74.90 E-value=7 Score=33.56 Aligned_cols=34 Identities=24% Similarity=0.336 Sum_probs=24.5
Q ss_pred CEEEEECCccCHHHHHHHHc---------CCEEEEEeh-HHHHH
Q 028335 124 KKIVELGSGCGLVGCIAALL---------GAQVILTDL-PDRLR 157 (210)
Q Consensus 124 ~~VLELGcGtGl~~l~la~~---------g~~Vv~tD~-~~~l~ 157 (210)
-.|+|+|+|.|.+..-+.+. ..+++.+|. +...+
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~ 125 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQ 125 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHH
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHH
Confidence 37999999999887755431 227999999 54433
No 383
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=74.47 E-value=9.3 Score=30.21 Aligned_cols=61 Identities=21% Similarity=0.179 Sum_probs=39.2
Q ss_pred ccCCCEEEEECCcc--C---HHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 120 LLHGKKIVELGSGC--G---LVGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 120 ~~~~~~VLELGcGt--G---l~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.+++|++|=-|++. | .++..+++.|++|+.+|. ++.++.+.+-++..+. ..+.+...|..+
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~ 69 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ-----PEAHLYQIDVQS 69 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC-----SSCEEEECCTTC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----CcEEEEEccCCC
Confidence 36899999999643 4 244556677999999999 6666666655544321 234555565443
No 384
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=74.21 E-value=16 Score=29.20 Aligned_cols=64 Identities=19% Similarity=0.314 Sum_probs=38.6
Q ss_pred ccCCCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.+++++||=.|++ |.+|..++ +.|++|++++. .+.++.+.+.+...... ....++.+...|..+
T Consensus 15 ~l~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~D~~~ 83 (303)
T 1yxm_A 15 LLQGQVAIVTGGA-TGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPP-TKQARVIPIQCNIRN 83 (303)
T ss_dssp TTTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCT-TCCCCEEEEECCTTC
T ss_pred CCCCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccc-cCCccEEEEecCCCC
Confidence 4578899999975 55555544 45899999998 66666555555442110 001345566666543
No 385
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=74.10 E-value=6.9 Score=32.73 Aligned_cols=35 Identities=20% Similarity=0.400 Sum_probs=22.6
Q ss_pred ccCCCEEEEECCcc--C--HHHHHHHHc---CCEEEEEehHH
Q 028335 120 LLHGKKIVELGSGC--G--LVGCIAALL---GAQVILTDLPD 154 (210)
Q Consensus 120 ~~~~~~VLELGcGt--G--l~~l~la~~---g~~Vv~tD~~~ 154 (210)
...+.+|||||||+ | --+..+.+. |+.|+++|+.+
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~ 148 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLND 148 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSC
T ss_pred ecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCcc
Confidence 34688999999843 2 223344443 45899999943
No 386
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=74.03 E-value=4.5 Score=33.71 Aligned_cols=41 Identities=15% Similarity=0.196 Sum_probs=29.5
Q ss_pred ccCCCEEEEECC-c-cCHHHHHHHH-cCCEEEEEeh-HHHHHHHH
Q 028335 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 120 ~~~~~~VLELGc-G-tGl~~l~la~-~g~~Vv~tD~-~~~l~~~~ 160 (210)
+.++++||-.|+ | .|...+.+++ .|++|+++|. ++.++.++
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 204 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE 204 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 457889999994 3 3666665554 5889999998 77666663
No 387
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=73.95 E-value=4.9 Score=33.32 Aligned_cols=41 Identities=29% Similarity=0.432 Sum_probs=29.9
Q ss_pred ccCCCEEEEECC-cc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGS-GC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGc-Gt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+.++++||=+|+ |. |+..+.+++ .|++|+++ . ++-++.+++
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~ 192 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD 192 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH
Confidence 457889999994 43 777777775 48899999 6 666665543
No 388
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=73.91 E-value=7 Score=34.12 Aligned_cols=43 Identities=19% Similarity=0.370 Sum_probs=29.7
Q ss_pred CCEEEEECCccCHHHHHHHH----cC---CEEEEEeh-HHHHHHHHHHHHH
Q 028335 123 GKKIVELGSGCGLVGCIAAL----LG---AQVILTDL-PDRLRLLKKNIEN 165 (210)
Q Consensus 123 ~~~VLELGcGtGl~~l~la~----~g---~~Vv~tD~-~~~l~~~~~N~~~ 165 (210)
.-+|+|+|+|.|.+..-+.+ .+ .++..+|. +.+.+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 46899999999987776543 22 37999999 5555444555443
No 389
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=73.66 E-value=4.1 Score=35.09 Aligned_cols=41 Identities=12% Similarity=0.140 Sum_probs=31.0
Q ss_pred ccCCCEEEEECC-cc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHH
Q 028335 120 LLHGKKIVELGS-GC-GLVGCIAAL-LGAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 120 ~~~~~~VLELGc-Gt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~ 160 (210)
+.++++||=.|+ |. |...+.+++ .|++|++++. ++-++.++
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~ 262 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR 262 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 457889999997 43 777777765 4889999988 66666664
No 390
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=72.61 E-value=3.9 Score=29.20 Aligned_cols=37 Identities=16% Similarity=0.311 Sum_probs=25.6
Q ss_pred CCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHHH
Q 028335 123 GKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 123 ~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~~ 161 (210)
..+|+=+|||. +|..++ ..|.+|+++|. ++.++.+++
T Consensus 7 ~~~viIiG~G~--~G~~la~~L~~~g~~v~vid~~~~~~~~~~~ 48 (140)
T 3fwz_A 7 CNHALLVGYGR--VGSLLGEKLLASDIPLVVIETSRTRVDELRE 48 (140)
T ss_dssp CSCEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred CCCEEEECcCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
Confidence 34688888864 444443 45889999999 777766553
No 391
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=72.56 E-value=2.9 Score=34.88 Aligned_cols=37 Identities=16% Similarity=0.297 Sum_probs=29.3
Q ss_pred CEEEEECCcc-CHHH-HHHH-H-cCCE-EEEEeh-HH---HHHHHH
Q 028335 124 KKIVELGSGC-GLVG-CIAA-L-LGAQ-VILTDL-PD---RLRLLK 160 (210)
Q Consensus 124 ~~VLELGcGt-Gl~~-l~la-~-~g~~-Vv~tD~-~~---~l~~~~ 160 (210)
.+||=+|+|. |+++ +.++ + .|++ |+++|. ++ -++.++
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~ 219 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE 219 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH
Confidence 8999999976 7777 7777 5 4786 999999 66 666665
No 392
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=71.86 E-value=3 Score=34.15 Aligned_cols=37 Identities=24% Similarity=0.213 Sum_probs=28.9
Q ss_pred EEEEECC-cc-CHHHHHHHHc-CCEEEEEeh-HHHHHHHHH
Q 028335 125 KIVELGS-GC-GLVGCIAALL-GAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 125 ~VLELGc-Gt-Gl~~l~la~~-g~~Vv~tD~-~~~l~~~~~ 161 (210)
+||=.|+ |. |...+.+++. |++|+++|. ++-++.+++
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~ 189 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS 189 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 4999998 54 8888877764 889999998 776776654
No 393
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=71.83 E-value=4.9 Score=32.93 Aligned_cols=42 Identities=26% Similarity=0.328 Sum_probs=30.2
Q ss_pred ccCCCEEEEECC-c-cCHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGS-G-CGLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGc-G-tGl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+.++++||-.|+ | .|...+.+++ .|++|+++|. ++.++.+++
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~ 183 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK 183 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 457889999994 3 3665555554 5899999998 766666654
No 394
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=71.59 E-value=8.6 Score=26.61 Aligned_cols=36 Identities=31% Similarity=0.410 Sum_probs=23.8
Q ss_pred CCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHH
Q 028335 123 GKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 123 ~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~ 160 (210)
+++|+=+|+| .+|..++ +.|.+|+++|. ++.++.++
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~ 44 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKGHDIVLIDIDKDICKKAS 44 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence 4678888875 4554443 45889999999 76655443
No 395
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=71.45 E-value=13 Score=29.14 Aligned_cols=58 Identities=22% Similarity=0.221 Sum_probs=38.4
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=-|++.| +|.. +++.|++|+++|. ++.++.+.+.+...+ .++.+..+|..+
T Consensus 5 ~~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~ 67 (252)
T 3h7a_A 5 PRNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG------GRIVARSLDARN 67 (252)
T ss_dssp CCSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT------CEEEEEECCTTC
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CeEEEEECcCCC
Confidence 47888999998866 3444 4455999999998 666666666665443 235555665443
No 396
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=71.40 E-value=20 Score=27.79 Aligned_cols=58 Identities=28% Similarity=0.397 Sum_probs=38.2
Q ss_pred cCCCEEEEECCccCHHHHHH----HHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~l----a~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
+++++||=-|++.| +|..+ ++.|++|+++|. .+.++.+.+.+...+ .++.+..+|..+
T Consensus 7 ~~~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~ 69 (253)
T 3qiv_A 7 FENKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG------GTAISVAVDVSD 69 (253)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CEEEEEECCTTS
T ss_pred cCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC------CcEEEEEccCCC
Confidence 57889999998654 44444 445899999999 776666666655432 235555565443
No 397
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=71.12 E-value=21 Score=28.75 Aligned_cols=58 Identities=21% Similarity=0.236 Sum_probs=38.9
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
+++++||=.|++.| +|.. +++.|++|+++|. ...++.+.+.+...+ .++.+..+|..+
T Consensus 29 l~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d 91 (301)
T 3tjr_A 29 FDGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG------FDAHGVVCDVRH 91 (301)
T ss_dssp STTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTC
T ss_pred cCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CceEEEEccCCC
Confidence 57889999998765 4444 3445999999999 777766666655443 235556666443
No 398
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=70.94 E-value=20 Score=27.63 Aligned_cols=58 Identities=22% Similarity=0.184 Sum_probs=37.0
Q ss_pred cCCCEEEEECCccCHHHHHH----HHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~l----a~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=.|++.| +|..+ ++.|++|++++. +..++.+...+...+ .++.+...|..+
T Consensus 3 l~~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~ 65 (247)
T 3lyl_A 3 LNEKVALVTGASRG-IGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG------FKARGLVLNISD 65 (247)
T ss_dssp TTTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT------CCEEEEECCTTC
T ss_pred CCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEEecCCC
Confidence 46788888887654 44444 445999999999 666666655555443 235555665443
No 399
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=70.85 E-value=19 Score=28.16 Aligned_cols=59 Identities=27% Similarity=0.342 Sum_probs=38.6
Q ss_pred ccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.++++++|=-|++.| +|.. +++.|++|+++|. .+.++.+.+.+...+ .++.+...|..+
T Consensus 9 ~l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d 72 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAG-IGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG------GKAIGLECNVTD 72 (256)
T ss_dssp CCTTCEEEECSCSSH-HHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT------CCEEEEECCTTC
T ss_pred CCCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEECCCCC
Confidence 467889999998765 3443 4445999999999 666666666555433 235555555443
No 400
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=70.53 E-value=10 Score=30.68 Aligned_cols=41 Identities=27% Similarity=0.243 Sum_probs=30.7
Q ss_pred cCCCEEEEECCccCH---HHHHHHHcCCEEEEEeh-HHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 121 ~~~~~VLELGcGtGl---~~l~la~~g~~Vv~tD~-~~~l~~~~~ 161 (210)
++||.+|==|++.|+ ++..+++.|++|+.+|. ++.++.+.+
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~ 71 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA 71 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 689999999998873 33345566999999999 776655443
No 401
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=70.40 E-value=7.1 Score=32.39 Aligned_cols=42 Identities=29% Similarity=0.362 Sum_probs=30.9
Q ss_pred CCEEEEECCcc-C-HHHHHHHHcCCEEEEEeh-HHHHHHHHHHHH
Q 028335 123 GKKIVELGSGC-G-LVGCIAALLGAQVILTDL-PDRLRLLKKNIE 164 (210)
Q Consensus 123 ~~~VLELGcGt-G-l~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~ 164 (210)
-++|-=||+|+ | .++..+++.|.+|++.|. ++.++.+++++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~ 50 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIR 50 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 35788889886 4 456666777999999999 887777766543
No 402
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=70.11 E-value=4.9 Score=34.78 Aligned_cols=41 Identities=34% Similarity=0.469 Sum_probs=30.0
Q ss_pred cCCCEEEEECCcc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 121 LHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 121 ~~~~~VLELGcGt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+++.+|+=+|+|. |.....+++ +|++|++.|. +..++.+++
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 4678999999975 655555443 5999999999 766655543
No 403
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=69.76 E-value=7 Score=32.06 Aligned_cols=42 Identities=26% Similarity=0.244 Sum_probs=30.8
Q ss_pred ccCCCEEEEECC--ccCHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 120 LLHGKKIVELGS--GCGLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~~~VLELGc--GtGl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+.++++||-.|+ |.|...+.+++ .|++|+++|. ++.++.+++
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 188 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK 188 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 457889999996 34766666554 5889999999 666666654
No 404
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=69.62 E-value=4.9 Score=34.52 Aligned_cols=39 Identities=33% Similarity=0.412 Sum_probs=28.6
Q ss_pred cCCCEEEEECCcc-CHHHHHHHH-cCCEEEEEeh-HHHHHHH
Q 028335 121 LHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLL 159 (210)
Q Consensus 121 ~~~~~VLELGcGt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~ 159 (210)
+++++|+=+|+|. |...+.+++ +|++|+++|. +..++.+
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 4688999999976 655555553 5899999998 6654444
No 405
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=69.28 E-value=22 Score=27.38 Aligned_cols=47 Identities=32% Similarity=0.447 Sum_probs=33.4
Q ss_pred ccCCCEEEEECCccCHHHHHH----HHcCCEEEEEeh-HHHHHHHHHHHHHhc
Q 028335 120 LLHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNL 167 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~l----a~~g~~Vv~tD~-~~~l~~~~~N~~~n~ 167 (210)
.++++++|=.|++.| +|..+ ++.|++|+++|. +..++.+.+.+...+
T Consensus 11 ~l~~k~vlITGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~ 62 (247)
T 3i1j_A 11 LLKGRVILVTGAARG-IGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG 62 (247)
T ss_dssp TTTTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC
Confidence 468889998888654 44444 445899999999 777766666665543
No 406
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=69.15 E-value=5.5 Score=33.40 Aligned_cols=40 Identities=28% Similarity=0.292 Sum_probs=28.6
Q ss_pred ccCCCEEEEEC-Ccc-CHHHHHHHH-cCCEEEEEehHHHHHHH
Q 028335 120 LLHGKKIVELG-SGC-GLVGCIAAL-LGAQVILTDLPDRLRLL 159 (210)
Q Consensus 120 ~~~~~~VLELG-cGt-Gl~~l~la~-~g~~Vv~tD~~~~l~~~ 159 (210)
..++++||=.| +|. |...+.+++ .|++|++++.++.++.+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~ 223 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELV 223 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHH
Confidence 44788999999 454 777777775 48899998864434444
No 407
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=69.07 E-value=32 Score=26.96 Aligned_cols=61 Identities=20% Similarity=0.187 Sum_probs=38.7
Q ss_pred ccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.++++++|=-|++.| +|.. +++.|++|+++|. ++.++.+.+.+...... .++.+...|..+
T Consensus 5 ~l~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~Dv~~ 70 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSG-IGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPG----ARLFASVCDVLD 70 (265)
T ss_dssp CCTTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTT----CCEEEEECCTTC
T ss_pred CcCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC----ceEEEEeCCCCC
Confidence 467889999998766 3443 4456999999999 77666666655542111 135555555433
No 408
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=68.93 E-value=20 Score=28.43 Aligned_cols=57 Identities=25% Similarity=0.356 Sum_probs=36.9
Q ss_pred CCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 122 HGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.++++|=-|++.| +|.. +++.|++|+++|. .+.++.+.+.+...+ ..+.+..+|..+
T Consensus 3 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d 64 (264)
T 3tfo_A 3 MDKVILITGASGG-IGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG------GTALAQVLDVTD 64 (264)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT------CEEEEEECCTTC
T ss_pred CCCEEEEeCCccH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEEcCCCC
Confidence 5778888888765 3443 4455999999999 776666666655443 235555555443
No 409
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=68.14 E-value=8.2 Score=32.69 Aligned_cols=41 Identities=32% Similarity=0.494 Sum_probs=28.1
Q ss_pred cCCCEEEEECCcc-CHHHHHHH-HcCCEEEEEeh-HHHHHHHHH
Q 028335 121 LHGKKIVELGSGC-GLVGCIAA-LLGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 121 ~~~~~VLELGcGt-Gl~~l~la-~~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+++++|+=+|+|. |......+ ..|++|+++|. ++.++.+++
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~ 209 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDA 209 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence 5788999999964 44333333 35889999998 766555443
No 410
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=67.92 E-value=1.1 Score=47.30 Aligned_cols=72 Identities=19% Similarity=0.111 Sum_probs=0.0
Q ss_pred EEEEECCccCHHHHHHHHc-------CCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCCCCCCccCCCC
Q 028335 125 KIVELGSGCGLVGCIAALL-------GAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDDPDQDLIQPLP 196 (210)
Q Consensus 125 ~VLELGcGtGl~~l~la~~-------g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~~~~~~~~~~f 196 (210)
+|||+|+|+|.....+... -.+++.||+ +...+.+++.+..-.+. .-.|.......+....|
T Consensus 1243 ~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~----------~~~~d~~~~~~~~~~~y 1312 (2512)
T 2vz8_A 1243 KVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVT----------QGQWDPANPAPGSLGKA 1312 (2512)
T ss_dssp EEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEE----------EECCCSSCCCC-----C
T ss_pred eEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccc----------cccccccccccCCCCce
Q ss_pred cEEEEcceee
Q 028335 197 DYGNESLLLF 206 (210)
Q Consensus 197 D~Iia~DviY 206 (210)
|+||++.+++
T Consensus 1313 dlvia~~vl~ 1322 (2512)
T 2vz8_A 1313 DLLVCNCALA 1322 (2512)
T ss_dssp CEEEEECC--
T ss_pred eEEEEccccc
No 411
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=67.89 E-value=22 Score=27.86 Aligned_cols=57 Identities=32% Similarity=0.440 Sum_probs=37.5
Q ss_pred cCCCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWG 184 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~ 184 (210)
+++++||=.|++.| +|..++ +.|++|++++. ...++.+.+.+...+ ..+.+..+|..
T Consensus 27 l~~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~ 88 (262)
T 3rkr_A 27 LSGQVAVVTGASRG-IGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG------GEAESHACDLS 88 (262)
T ss_dssp TTTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CEEEEEECCTT
T ss_pred cCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC------CceeEEEecCC
Confidence 57889998887654 555444 45899999999 766666666655443 23555555543
No 412
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=67.63 E-value=19 Score=28.68 Aligned_cols=60 Identities=25% Similarity=0.264 Sum_probs=35.6
Q ss_pred ccCCCEEEEECCccCHHHHHH----HHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~l----a~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.++++++|=-|++.| +|..+ ++.|++|+++|. ++.++.+.+.+...+. ..+.+..+|..+
T Consensus 30 ~l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d 94 (281)
T 4dry_A 30 SGEGRIALVTGGGTG-VGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-----NIVRAVVCDVGD 94 (281)
T ss_dssp ----CEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-----SCEEEEECCTTC
T ss_pred CCCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----CeEEEEEcCCCC
Confidence 357889998887755 44444 445999999999 7666666655544332 123555666543
No 413
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=67.44 E-value=8.8 Score=32.25 Aligned_cols=41 Identities=39% Similarity=0.520 Sum_probs=29.0
Q ss_pred cCCCEEEEECCcc-CHHHHHHH-HcCCEEEEEeh-HHHHHHHHH
Q 028335 121 LHGKKIVELGSGC-GLVGCIAA-LLGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 121 ~~~~~VLELGcGt-Gl~~l~la-~~g~~Vv~tD~-~~~l~~~~~ 161 (210)
+++++|+=+|+|. |...+.++ ..|++|+++|. ++.++.+++
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~ 208 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLET 208 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence 4568999999965 55444444 35889999998 766655543
No 414
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=67.43 E-value=8.1 Score=28.60 Aligned_cols=40 Identities=13% Similarity=0.084 Sum_probs=26.3
Q ss_pred cCCCEEEEECCcc-CH-HHHHHHHc-CCEEEEEeh-HHHHHHHH
Q 028335 121 LHGKKIVELGSGC-GL-VGCIAALL-GAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 121 ~~~~~VLELGcGt-Gl-~~l~la~~-g~~Vv~tD~-~~~l~~~~ 160 (210)
..+++|+=+|+|. |. ++..+.+. |.+|+++|. ++.++.++
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~ 80 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHR 80 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH
Confidence 3466899898764 42 22334456 889999999 76665544
No 415
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=67.03 E-value=24 Score=27.68 Aligned_cols=45 Identities=27% Similarity=0.390 Sum_probs=31.4
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHh
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENN 166 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n 166 (210)
++++++|=-|++.| +|.. +++.|++|+++|. ++.++.+.+.+...
T Consensus 8 l~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~ 57 (267)
T 3t4x_A 8 LKGKTALVTGSTAG-IGKAIATSLVAEGANVLINGRREENVNETIKEIRAQ 57 (267)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh
Confidence 57888998887655 4444 4455999999999 66666555555544
No 416
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=66.92 E-value=11 Score=30.22 Aligned_cols=40 Identities=30% Similarity=0.453 Sum_probs=29.1
Q ss_pred CEEEEECCcc-C-HHHHHHHHcCCEEEEEeh-HHHHHHHHHHH
Q 028335 124 KKIVELGSGC-G-LVGCIAALLGAQVILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 124 ~~VLELGcGt-G-l~~l~la~~g~~Vv~tD~-~~~l~~~~~N~ 163 (210)
++|.=+|+|. | .++..+++.|.+|++.|. ++.++.+++.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 47 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF 47 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence 4677788876 3 445556667999999999 77777666654
No 417
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=66.77 E-value=2.8 Score=34.48 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=29.5
Q ss_pred CCC-EEEEECC-cc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 122 HGK-KIVELGS-GC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 122 ~~~-~VLELGc-Gt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
++. +||=.|+ |. |...+.+++ .|++|++++. ++-++.+++
T Consensus 149 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~ 193 (330)
T 1tt7_A 149 PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ 193 (330)
T ss_dssp GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred CCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 454 8999998 44 777777775 4889999998 666666654
No 418
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=66.64 E-value=24 Score=27.98 Aligned_cols=46 Identities=22% Similarity=0.164 Sum_probs=32.2
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhc
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNL 167 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~ 167 (210)
++++++|=-|++.| +|.. +++.|++|+++|. +..++.+...+...+
T Consensus 26 l~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~ 76 (270)
T 3ftp_A 26 LDKQVAIVTGASRG-IGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG 76 (270)
T ss_dssp TTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC
Confidence 57888888887655 3443 4456999999999 766666666665543
No 419
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=66.19 E-value=2.5 Score=34.78 Aligned_cols=40 Identities=15% Similarity=0.153 Sum_probs=29.6
Q ss_pred CCC-EEEEECC-cc-CHHHHHHHH-cCCEEEEEeh-HHHHHHHHH
Q 028335 122 HGK-KIVELGS-GC-GLVGCIAAL-LGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 122 ~~~-~VLELGc-Gt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~~~ 161 (210)
++. +||=.|+ |. |...+.+++ .|++|++++. ++-++.+++
T Consensus 148 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~ 192 (328)
T 1xa0_A 148 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV 192 (328)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 454 7999997 43 777777775 4889999998 666666653
No 420
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=65.69 E-value=6.8 Score=33.60 Aligned_cols=40 Identities=28% Similarity=0.405 Sum_probs=28.8
Q ss_pred cCCCEEEEECCcc-CHHHHHHH-HcCCEEEEEeh-HHHHHHHH
Q 028335 121 LHGKKIVELGSGC-GLVGCIAA-LLGAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 121 ~~~~~VLELGcGt-Gl~~l~la-~~g~~Vv~tD~-~~~l~~~~ 160 (210)
+++.+|+=+|+|. |......+ .+|++|++.|. +..++.++
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~ 224 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVR 224 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 3778999999975 55554444 35999999999 76555544
No 421
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=65.57 E-value=37 Score=26.22 Aligned_cols=58 Identities=29% Similarity=0.383 Sum_probs=36.8
Q ss_pred cCCCEEEEECCccCHHHHHH----HHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~l----a~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=.|++.| +|..+ ++.|++|++++. ++.++.+.+.+...+ .++.+...|..+
T Consensus 5 l~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~~ 67 (247)
T 2jah_A 5 LQGKVALITGASSG-IGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG------AKVHVLELDVAD 67 (247)
T ss_dssp TTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTC
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEECCCCC
Confidence 57788999997654 45444 445899999998 666665555554322 235555555443
No 422
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=65.52 E-value=30 Score=26.86 Aligned_cols=46 Identities=33% Similarity=0.473 Sum_probs=32.4
Q ss_pred ccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHh
Q 028335 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENN 166 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n 166 (210)
.++++++|=-|++.| +|.. +++.|++|+++|. ++.++.+.+.+...
T Consensus 9 ~l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~ 59 (252)
T 3f1l_A 9 LLNDRIILVTGASDG-IGREAAMTYARYGATVILLGRNEEKLRQVASHINEE 59 (252)
T ss_dssp TTTTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh
Confidence 468899999998765 3444 4455999999999 76666665555443
No 423
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=65.31 E-value=8.4 Score=33.72 Aligned_cols=37 Identities=32% Similarity=0.461 Sum_probs=26.4
Q ss_pred CEEEEECCcc-CH-HHHHHHHcCCEEEEEeh-HHHHHHHH
Q 028335 124 KKIVELGSGC-GL-VGCIAALLGAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 124 ~~VLELGcGt-Gl-~~l~la~~g~~Vv~tD~-~~~l~~~~ 160 (210)
.+|-=+|+|. |+ ++..+|..|.+|+++|+ ++.++.++
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln 61 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLR 61 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence 4788888876 64 33445667999999999 77666553
No 424
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=65.03 E-value=5.6 Score=33.79 Aligned_cols=39 Identities=28% Similarity=0.434 Sum_probs=28.7
Q ss_pred cCCCEEEEECCcc-CHHHHHHHH-cCCEEEEEeh-HHHHHHH
Q 028335 121 LHGKKIVELGSGC-GLVGCIAAL-LGAQVILTDL-PDRLRLL 159 (210)
Q Consensus 121 ~~~~~VLELGcGt-Gl~~l~la~-~g~~Vv~tD~-~~~l~~~ 159 (210)
+++++|+=+|+|. |...+.+++ +|++|+++|. +..++.+
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 170 VPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV 211 (384)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 4789999999986 665555554 5889999998 6554444
No 425
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=64.95 E-value=27 Score=27.69 Aligned_cols=59 Identities=10% Similarity=0.025 Sum_probs=35.5
Q ss_pred ccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
..+++++|=-|++.| +|.. +++.|++|++++. .+.++.+.+.+...+ ..+.+...|..+
T Consensus 21 m~~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d 84 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG------HDVDGSSCDVTS 84 (279)
T ss_dssp ----CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------CCEEEEECCTTC
T ss_pred ccCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEECCCCC
Confidence 357889999998765 3443 4456999999999 666665555554332 235556666443
No 426
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=64.86 E-value=31 Score=26.44 Aligned_cols=44 Identities=30% Similarity=0.482 Sum_probs=30.0
Q ss_pred cCCCEEEEECCccCHHHHHHHH----cCCEEEEEeh-HHHHHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAAL----LGAQVILTDL-PDRLRLLKKNIEN 165 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la~----~g~~Vv~tD~-~~~l~~~~~N~~~ 165 (210)
+++++||=.|++ |.+|..+++ .|++|+++|. +..++.+.+.+..
T Consensus 9 ~~~~~vlVtGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 57 (255)
T 1fmc_A 9 LDGKCAIITGAG-AGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ 57 (255)
T ss_dssp CTTCEEEETTTT-SHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCc-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHH
Confidence 578888888864 556665554 4889999998 6665555555443
No 427
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=64.73 E-value=8.1 Score=27.88 Aligned_cols=37 Identities=27% Similarity=0.358 Sum_probs=24.4
Q ss_pred ccCCCEEEEECCcc-CH-HHHHHHHcCCEEEEEeh-HHHH
Q 028335 120 LLHGKKIVELGSGC-GL-VGCIAALLGAQVILTDL-PDRL 156 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl-~~l~la~~g~~Vv~tD~-~~~l 156 (210)
...+++|+=+|+|. |. ++..+...|.+|+++|. ++.+
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~ 55 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAF 55 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGG
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence 45778999999864 42 22233345889999998 6543
No 428
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=64.37 E-value=27 Score=27.40 Aligned_cols=59 Identities=20% Similarity=0.269 Sum_probs=37.8
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=-|++.| +|.. +++.|++|+++|. ++.++.+.+.+...+. .++.+...|..+
T Consensus 8 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dv~~ 71 (262)
T 3pk0_A 8 LQGRSVVVTGGTKG-IGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS-----GKVIGVQTDVSD 71 (262)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSS-----SCEEEEECCTTS
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-----CcEEEEEcCCCC
Confidence 57888998887655 4444 4445999999999 6666665555543321 245566666543
No 429
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=64.06 E-value=41 Score=26.24 Aligned_cols=60 Identities=22% Similarity=0.333 Sum_probs=36.9
Q ss_pred cCCCEEEEECCccCHHHHHH----HHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~l----a~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=.|++.| +|..+ ++.|++|+++|. ++.++.+.+.+...... .++.+...|..+
T Consensus 11 l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~ 75 (267)
T 1iy8_A 11 FTDRVVLITGGGSG-LGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD----AEVLTTVADVSD 75 (267)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTT----CCEEEEECCTTS
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC----ceEEEEEccCCC
Confidence 57889999998654 44444 445899999998 66665555555433111 235555555443
No 430
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=63.98 E-value=35 Score=26.95 Aligned_cols=61 Identities=20% Similarity=0.286 Sum_probs=38.6
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
+.++++|=-|++.| +|.. +++.|++|+++|. ++.++.+.+.+...+.. ...+.+...|..+
T Consensus 9 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~~~Dv~~ 74 (281)
T 3svt_A 9 FQDRTYLVTGGGSG-IGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGAN---GGAIRYEPTDITN 74 (281)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCS---SCEEEEEECCTTS
T ss_pred cCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCC---CceEEEEeCCCCC
Confidence 57889999998755 3444 4455999999999 77666666655543321 1245555565443
No 431
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=63.97 E-value=41 Score=26.11 Aligned_cols=61 Identities=21% Similarity=0.283 Sum_probs=38.4
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
+.++++|=-|++.| +|.. +++.|++|++++. ++.++.+.+.+...... ...+.+..+|..+
T Consensus 5 ~~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~ 70 (250)
T 3nyw_A 5 KQKGLAIITGASQG-IGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKH---VQEPIVLPLDITD 70 (250)
T ss_dssp CCCCEEEEESTTSH-HHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTT---SCCCEEEECCTTC
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccc---cCcceEEeccCCC
Confidence 46788999998765 3444 4445999999999 77766666666544211 0234555565443
No 432
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=63.89 E-value=9.9 Score=31.48 Aligned_cols=42 Identities=31% Similarity=0.443 Sum_probs=29.8
Q ss_pred ccCC--CEEEEECC-c-cCHHHHHHHH-cCC-EEEEEeh-HHHHHHHHH
Q 028335 120 LLHG--KKIVELGS-G-CGLVGCIAAL-LGA-QVILTDL-PDRLRLLKK 161 (210)
Q Consensus 120 ~~~~--~~VLELGc-G-tGl~~l~la~-~g~-~Vv~tD~-~~~l~~~~~ 161 (210)
+.++ ++||=.|+ | .|...+.+++ .|+ +|+++|. ++.++.+++
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~ 204 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTS 204 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH
Confidence 3467 89999998 3 3665555554 588 9999999 666655543
No 433
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=63.88 E-value=23 Score=28.13 Aligned_cols=59 Identities=27% Similarity=0.316 Sum_probs=38.0
Q ss_pred ccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.++++++|=-|++.| +|.. +++.|++|+++|. ++.++.+.+.+...+ .++.+...|..+
T Consensus 29 ~l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dl~d 92 (276)
T 3r1i_A 29 DLSGKRALITGASTG-IGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG------GKALPIRCDVTQ 92 (276)
T ss_dssp CCTTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT------CCCEEEECCTTC
T ss_pred CCCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CeEEEEEcCCCC
Confidence 357899999998765 3443 4456999999998 666666655554433 234555555443
No 434
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=63.71 E-value=38 Score=26.56 Aligned_cols=59 Identities=14% Similarity=0.142 Sum_probs=36.8
Q ss_pred cCCCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWG 184 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~ 184 (210)
+++++||=.|++ |.+|..++ +.|++|++++. +..++.+.+.+...+.. ..+.+...|..
T Consensus 30 l~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~ 93 (279)
T 1xg5_A 30 WRDRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP----GTLIPYRCDLS 93 (279)
T ss_dssp GTTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCS----SEEEEEECCTT
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCC----ceEEEEEecCC
Confidence 578899999876 44555544 45899999998 66666555555443321 23445555543
No 435
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=63.68 E-value=38 Score=26.75 Aligned_cols=58 Identities=16% Similarity=0.101 Sum_probs=36.4
Q ss_pred cCCCEEEEECCccCHHHHHH----HHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~l----a~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=.|++.| +|..+ ++.|++|++++. ++.++.+.+.+...+ .++.+...|..+
T Consensus 20 l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~~ 82 (277)
T 2rhc_B 20 QDSEVALVTGATSG-IGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG------VEADGRTCDVRS 82 (277)
T ss_dssp TTSCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTC
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEECCCCC
Confidence 47788999998654 45444 345899999998 666655555554332 234555555443
No 436
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=63.52 E-value=6.3 Score=32.81 Aligned_cols=32 Identities=31% Similarity=0.426 Sum_probs=22.6
Q ss_pred ccCCCEEEEECCccCH---HHHHHHHcCC-EEEEEeh
Q 028335 120 LLHGKKIVELGSGCGL---VGCIAALLGA-QVILTDL 152 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl---~~l~la~~g~-~Vv~tD~ 152 (210)
.++++++|=+|+| |. +...+++.|+ +|+.++.
T Consensus 151 ~l~gk~~lVlGaG-G~g~aia~~L~~~Ga~~V~i~nR 186 (315)
T 3tnl_A 151 DIIGKKMTICGAG-GAATAICIQAALDGVKEISIFNR 186 (315)
T ss_dssp CCTTSEEEEECCS-HHHHHHHHHHHHTTCSEEEEEEC
T ss_pred CccCCEEEEECCC-hHHHHHHHHHHHCCCCEEEEEEC
Confidence 3588999999997 42 3334556688 7877766
No 437
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=63.15 E-value=29 Score=27.43 Aligned_cols=60 Identities=20% Similarity=0.178 Sum_probs=37.2
Q ss_pred cCCCEEEEECCccCHHHHHH----HHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDD 186 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~l----a~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~ 186 (210)
.++++||=-|++.| +|..+ ++.|++|++++. ...++.+.+.+...+. .++.+..+|..+.
T Consensus 10 ~~~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dl~~~ 74 (311)
T 3o26_A 10 TKRRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH-----ENVVFHQLDVTDP 74 (311)
T ss_dssp --CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-----CSEEEEECCTTSC
T ss_pred CCCcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-----CceEEEEccCCCc
Confidence 46788998887755 44444 445899999998 6655555555443321 3466777776543
No 438
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=63.12 E-value=19 Score=28.13 Aligned_cols=58 Identities=24% Similarity=0.333 Sum_probs=36.9
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=-|++.| +|.. +++.|++|+++|. ++.++.+...+...+ .++.+...|..+
T Consensus 4 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~ 66 (257)
T 3imf_A 4 MKEKVVIITGGSSG-MGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP------GQILTVQMDVRN 66 (257)
T ss_dssp TTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST------TCEEEEECCTTC
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEccCCC
Confidence 57888998887655 4444 4455999999999 666665555443221 345566666543
No 439
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=63.05 E-value=15 Score=30.83 Aligned_cols=38 Identities=42% Similarity=0.577 Sum_probs=27.1
Q ss_pred cCCCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLK 160 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~ 160 (210)
+++++|+=+|+| .+|..++ ..|++|+++|. ++.++.++
T Consensus 164 l~~~~V~ViGaG--~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~ 206 (369)
T 2eez_A 164 VAPASVVILGGG--TVGTNAAKIALGMGAQVTILDVNHKRLQYLD 206 (369)
T ss_dssp BCCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 567899999995 4444433 35889999998 76655444
No 440
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=62.72 E-value=36 Score=26.69 Aligned_cols=59 Identities=24% Similarity=0.303 Sum_probs=36.8
Q ss_pred ccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh--HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL--PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~--~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.++++++|=-|++.|+ |.. +++.|++|++++. ...++.+.+.+...+ .++.+..+|..+
T Consensus 15 ~l~~k~~lVTGas~gI-G~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~ 79 (270)
T 3is3_A 15 RLDGKVALVTGSGRGI-GAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG------SDAIAIKADIRQ 79 (270)
T ss_dssp CCTTCEEEESCTTSHH-HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTS
T ss_pred CcCCCEEEEECCCchH-HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------CcEEEEEcCCCC
Confidence 4678899999987653 443 4456999999876 445555555554433 235555665443
No 441
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=62.62 E-value=41 Score=26.35 Aligned_cols=59 Identities=15% Similarity=0.196 Sum_probs=37.9
Q ss_pred ccCCCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.+.+++||=.|++ |.+|..++ +.|++|+++|. +..++.+.+.+...+ .++.+...|..+
T Consensus 28 ~l~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dl~~ 91 (272)
T 1yb1_A 28 SVTGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG------AKVHTFVVDCSN 91 (272)
T ss_dssp CCTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTC
T ss_pred ccCCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC------CeEEEEEeeCCC
Confidence 3578899999876 44555554 45899999998 666655555554432 235556666543
No 442
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=62.55 E-value=37 Score=26.46 Aligned_cols=58 Identities=19% Similarity=0.223 Sum_probs=36.5
Q ss_pred cCCCEEEEECCccCHHHHHH----HHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~l----a~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=.|++.| +|..+ ++.|++|++++. ++.++.+.+.+...+ .++.+...|..+
T Consensus 5 l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~ 67 (262)
T 1zem_A 5 FNGKVCLVTGAGGN-IGLATALRLAEEGTAIALLDMNREALEKAEASVREKG------VEARSYVCDVTS 67 (262)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------SCEEEEECCTTC
T ss_pred cCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEecCCC
Confidence 47888998988755 44444 345899999998 666655555443322 235555566543
No 443
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=62.37 E-value=14 Score=24.64 Aligned_cols=37 Identities=24% Similarity=0.293 Sum_probs=25.2
Q ss_pred CCCEEEEECCccCHHHHHHH----HcC-CEEEEEeh-HHHHHHHH
Q 028335 122 HGKKIVELGSGCGLVGCIAA----LLG-AQVILTDL-PDRLRLLK 160 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la----~~g-~~Vv~tD~-~~~l~~~~ 160 (210)
.+++|+=+|+ |.+|..++ +.| .+|+++|. ++.++.++
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~ 46 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN 46 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Confidence 4568999998 55555544 347 68999999 66554443
No 444
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=62.04 E-value=44 Score=26.26 Aligned_cols=58 Identities=19% Similarity=0.098 Sum_probs=36.0
Q ss_pred cCCCEEEEECCccCHHHHHH----HHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~l----a~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=.|++.| +|..+ ++.|++|+++|. ++.++.+.+.+...+ ..+.+...|..+
T Consensus 19 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~ 81 (273)
T 1ae1_A 19 LKGTTALVTGGSKG-IGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG------LNVEGSVCDLLS 81 (273)
T ss_dssp CTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTC
T ss_pred CCCCEEEEECCcch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEECCCCC
Confidence 57889999997654 44444 445899999998 665555544443322 234555555433
No 445
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=61.96 E-value=34 Score=26.80 Aligned_cols=60 Identities=18% Similarity=0.331 Sum_probs=38.6
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGDD 186 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~~ 186 (210)
++++++|=-|++.| +|.. +++.|++|+++|. .+.++.+.+.+..... .++.+...|..+.
T Consensus 18 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dv~~~ 82 (266)
T 4egf_A 18 LDGKRALITGATKG-IGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG-----TDVHTVAIDLAEP 82 (266)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-----CCEEEEECCTTST
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-----CcEEEEEecCCCH
Confidence 57889998888765 3444 4455999999998 6666666555544211 2456666665443
No 446
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=61.82 E-value=13 Score=32.49 Aligned_cols=40 Identities=30% Similarity=0.382 Sum_probs=30.3
Q ss_pred CEEEEECCcc-C-HHHHHHHHcCCEEEEEeh-HHHHHHHHHHH
Q 028335 124 KKIVELGSGC-G-LVGCIAALLGAQVILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 124 ~~VLELGcGt-G-l~~l~la~~g~~Vv~tD~-~~~l~~~~~N~ 163 (210)
++|.=||+|. | .++..+++.|.+|++.|. ++.++.++..+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i 80 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKII 80 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence 5799999987 4 455566677889999999 77777666544
No 447
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=61.80 E-value=41 Score=26.14 Aligned_cols=58 Identities=19% Similarity=0.118 Sum_probs=36.0
Q ss_pred cCCCEEEEECCccCHHHHHH----HHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~l----a~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=-|++.| +|..+ ++.|++|+++|. ++.++.+.+.+...+ .++.+...|..+
T Consensus 7 l~~k~vlVTGas~g-iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~ 69 (260)
T 2ae2_A 7 LEGCTALVTGGSRG-IGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG------FKVEASVCDLSS 69 (260)
T ss_dssp CTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CEEEEEECCTTC
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEcCCCC
Confidence 57889998887654 44444 445899999998 666555544443322 235555555443
No 448
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=61.69 E-value=31 Score=27.46 Aligned_cols=58 Identities=21% Similarity=0.189 Sum_probs=36.3
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=-|++.| +|.. +++.|++|+++|. .+.++.+.+.+...+ ..+.+...|..+
T Consensus 26 ~~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d 88 (283)
T 3v8b_A 26 QPSPVALITGAGSG-IGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG------GQAIALEADVSD 88 (283)
T ss_dssp -CCCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT------CCEEEEECCTTC
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEccCCC
Confidence 46788999998765 3444 4455999999998 666655555443322 345556666443
No 449
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=61.38 E-value=9.7 Score=31.89 Aligned_cols=40 Identities=23% Similarity=0.142 Sum_probs=28.8
Q ss_pred cCCCEEEEECC-c-cCHHHHHHHHc-CCEEEEEehHHHHHHHH
Q 028335 121 LHGKKIVELGS-G-CGLVGCIAALL-GAQVILTDLPDRLRLLK 160 (210)
Q Consensus 121 ~~~~~VLELGc-G-tGl~~l~la~~-g~~Vv~tD~~~~l~~~~ 160 (210)
.++.+||=+|+ | .|.+.+.+++. |++|+++.-++-++.++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 205 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAK 205 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHH
Confidence 57889999999 4 48888877764 88988884454455444
No 450
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=60.76 E-value=48 Score=25.43 Aligned_cols=57 Identities=16% Similarity=0.170 Sum_probs=35.6
Q ss_pred cCCCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWG 184 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~ 184 (210)
+++++||=.|++ |.+|..++ +.|++|+++|. +..++.+.+.+...+ .++.+...|..
T Consensus 11 l~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~D~~ 72 (260)
T 3awd_A 11 LDNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG------HDVSSVVMDVT 72 (260)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTT
T ss_pred CCCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEEecCC
Confidence 578889988876 44555544 45899999998 665554444444322 23555555543
No 451
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=59.95 E-value=13 Score=31.81 Aligned_cols=39 Identities=28% Similarity=0.453 Sum_probs=33.5
Q ss_pred CEEEEECCcc---CHHHHHHHHcCCEEEEEeh-HHHHHHHHHH
Q 028335 124 KKIVELGSGC---GLVGCIAALLGAQVILTDL-PDRLRLLKKN 162 (210)
Q Consensus 124 ~~VLELGcGt---Gl~~l~la~~g~~Vv~tD~-~~~l~~~~~N 162 (210)
++++=+|+|. |.++-.+++.|.+|++.|. +..++.+++.
T Consensus 1 mkavhfGaGniGRGfig~~l~~~g~~v~f~dv~~~~i~~Ln~~ 43 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNAR 43 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CcEEEECCCccchhhHHHHHHHcCCeEEEEeCCHHHHHHHhcC
Confidence 3688899996 7899999999999999999 7788887764
No 452
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=59.94 E-value=46 Score=26.23 Aligned_cols=60 Identities=15% Similarity=0.221 Sum_probs=36.4
Q ss_pred ccCCCEEEEECCccCHHHHHH----HHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~l----a~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.++++++|=-|++.| +|..+ ++.|++|+++|. .+.+..+...+....- .++.+...|..+
T Consensus 24 ~l~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~ 88 (277)
T 4fc7_A 24 LLRDKVAFITGGGSG-IGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-----RRCLPLSMDVRA 88 (277)
T ss_dssp TTTTCEEEEETTTSH-HHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS-----SCEEEEECCTTC
T ss_pred ccCCCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-----CcEEEEEcCCCC
Confidence 468899999998765 44443 445899999998 6555444444432211 235556666543
No 453
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=59.90 E-value=21 Score=28.37 Aligned_cols=58 Identities=28% Similarity=0.371 Sum_probs=37.5
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=-|++.| +|.. +++.|++|+++|. ++.++.+.+.+...+ .++.+...|..+
T Consensus 31 l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~ 93 (275)
T 4imr_A 31 LRGRTALVTGSSRG-IGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG------GTAQELAGDLSE 93 (275)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT------CCEEEEECCTTS
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC------CeEEEEEecCCC
Confidence 57899998887755 4444 4455999999998 665555555554433 235566666544
No 454
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=59.72 E-value=39 Score=26.45 Aligned_cols=59 Identities=22% Similarity=0.299 Sum_probs=36.8
Q ss_pred ccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh--HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL--PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~--~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.+++++||=.|++.| +|.. +++.|++|++++. ....+.+++.+...+ .++.+...|..+
T Consensus 26 ~l~~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~D~~~ 90 (271)
T 4iin_A 26 QFTGKNVLITGASKG-IGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG------YKAAVIKFDAAS 90 (271)
T ss_dssp CCSCCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTC
T ss_pred ccCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC------CceEEEECCCCC
Confidence 367889999888765 4444 4445899999987 344555555554433 235556666443
No 455
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=59.65 E-value=43 Score=25.93 Aligned_cols=44 Identities=20% Similarity=0.266 Sum_probs=29.6
Q ss_pred cCCCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIEN 165 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~~N~~~ 165 (210)
++++++|=.|++.| +|..++ +.|++|+++|. ++.++.+.+.+..
T Consensus 12 l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 60 (260)
T 2zat_A 12 LENKVALVTASTDG-IGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG 60 (260)
T ss_dssp TTTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 57888998887654 455544 45899999998 6655555544443
No 456
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=59.60 E-value=39 Score=26.25 Aligned_cols=58 Identities=26% Similarity=0.304 Sum_probs=35.7
Q ss_pred cCCCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=-|++.| +|..++ +.|++|+++|. ++.++.+.+.+...+ .++.+...|..+
T Consensus 3 l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~ 65 (260)
T 2qq5_A 3 MNGQVCVVTGASRG-IGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG------GQCVPVVCDSSQ 65 (260)
T ss_dssp TTTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS------SEEEEEECCTTS
T ss_pred CCCCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC------CceEEEECCCCC
Confidence 46788888887654 555444 45899999998 666555555444332 234555555443
No 457
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=59.31 E-value=55 Score=25.62 Aligned_cols=43 Identities=19% Similarity=0.258 Sum_probs=29.7
Q ss_pred ccCCCEEEEECCccCHHHHHH----HHcCCEEEEEeh-HHHHHHHHHHH
Q 028335 120 LLHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~l----a~~g~~Vv~tD~-~~~l~~~~~N~ 163 (210)
.++++++|=.|++.| +|..+ ++.|++|++++. ++.++.+.+.+
T Consensus 18 ~l~~k~~lVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l 65 (267)
T 1vl8_A 18 DLRGRVALVTGGSRG-LGFGIAQGLAEAGCSVVVASRNLEEASEAAQKL 65 (267)
T ss_dssp CCTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 467889999997654 44444 445899999998 66555554444
No 458
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=58.93 E-value=51 Score=26.06 Aligned_cols=59 Identities=10% Similarity=0.134 Sum_probs=36.8
Q ss_pred cCCCEEEEECCccCH---HHHHHHHcCCEEEEEeh--HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGL---VGCIAALLGAQVILTDL--PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl---~~l~la~~g~~Vv~tD~--~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
+.++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+...+...+ .++.+...|..+
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d 90 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG------ARVIFLRADLAD 90 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT------CCEEEEECCTTS
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC------CcEEEEEecCCC
Confidence 467889999987653 22334456999999985 455555555554433 245666666544
No 459
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=58.49 E-value=56 Score=25.29 Aligned_cols=43 Identities=33% Similarity=0.486 Sum_probs=29.2
Q ss_pred cCCCEEEEECCccCHHHHHH----HHcCCEEEEEeh-HHHHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIE 164 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~l----a~~g~~Vv~tD~-~~~l~~~~~N~~ 164 (210)
++++++|=.|++.| +|..+ ++.|++|++++. ++.++.+.+.+.
T Consensus 5 l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~ 52 (263)
T 3ai3_A 5 ISGKVAVITGSSSG-IGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLK 52 (263)
T ss_dssp CTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence 46788998887654 45444 345899999998 665555544443
No 460
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=58.26 E-value=50 Score=26.37 Aligned_cols=58 Identities=21% Similarity=0.196 Sum_probs=36.2
Q ss_pred cCCCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=.|++.| +|..++ +.|++|+++|. ++.++.+.+.+...+ ..+.+...|..+
T Consensus 32 l~~k~vlVTGas~g-IG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d 94 (291)
T 3cxt_A 32 LKGKIALVTGASYG-IGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAG------INAHGYVCDVTD 94 (291)
T ss_dssp CTTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT------CCCEEEECCTTC
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CeEEEEEecCCC
Confidence 57889999997654 455444 45899999998 666655555444332 234455555443
No 461
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=58.20 E-value=25 Score=27.48 Aligned_cols=41 Identities=27% Similarity=0.451 Sum_probs=29.0
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKN 162 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N 162 (210)
++++++|=-|++.| +|.. +++.|++|+++|. ++.++.+.+.
T Consensus 6 l~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~ 51 (255)
T 4eso_A 6 YQGKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREE 51 (255)
T ss_dssp TTTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 57889999998765 3444 4456999999998 6665554443
No 462
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=57.98 E-value=23 Score=28.12 Aligned_cols=46 Identities=26% Similarity=0.435 Sum_probs=31.7
Q ss_pred ccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHh
Q 028335 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENN 166 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n 166 (210)
.++++++|=-|++.| +|.. +++.|++|+++|. ++.++.+.+.+...
T Consensus 23 ~l~gk~~lVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~ 73 (271)
T 4ibo_A 23 DLGGRTALVTGSSRG-LGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV 73 (271)
T ss_dssp CCTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc
Confidence 357889998887655 4444 4455999999998 66666655555443
No 463
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=57.96 E-value=49 Score=26.05 Aligned_cols=58 Identities=26% Similarity=0.239 Sum_probs=36.4
Q ss_pred cCCCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWG 184 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~ 184 (210)
+++++||=.|++. .+|..++ +.|++|++++. ++.++.+...+...+. ..+.+...|..
T Consensus 26 ~~~k~vlITGasg-gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~Dl~ 88 (286)
T 1xu9_A 26 LQGKKVIVTGASK-GIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-----ASAHYIAGTME 88 (286)
T ss_dssp GTTCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-----SEEEEEECCTT
T ss_pred cCCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-----CceEEEeCCCC
Confidence 5788999888764 4555444 45899999998 6666655555443321 13455555543
No 464
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=57.37 E-value=18 Score=28.92 Aligned_cols=42 Identities=33% Similarity=0.451 Sum_probs=29.7
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNI 163 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~ 163 (210)
++++++|=-|++.| +|.. +++.|++|+++|. ++.++.+.+.+
T Consensus 6 l~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~ 52 (280)
T 3tox_A 6 LEGKIAIVTGASSG-IGRAAALLFAREGAKVVVTARNGNALAELTDEI 52 (280)
T ss_dssp TTTCEEEESSTTSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 57888998898765 3433 4456999999999 66665555544
No 465
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=57.33 E-value=16 Score=32.39 Aligned_cols=40 Identities=33% Similarity=0.332 Sum_probs=27.4
Q ss_pred ccCCCEEEEECCcc-CHHHHHHH-HcCCEEEEEeh-HHHHHHH
Q 028335 120 LLHGKKIVELGSGC-GLVGCIAA-LLGAQVILTDL-PDRLRLL 159 (210)
Q Consensus 120 ~~~~~~VLELGcGt-Gl~~l~la-~~g~~Vv~tD~-~~~l~~~ 159 (210)
...+++|+=+|+|. |......+ ..|++|+++|. +..+..+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A 313 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQA 313 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 46899999999864 43333333 34889999998 6654443
No 466
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=57.10 E-value=21 Score=28.75 Aligned_cols=60 Identities=22% Similarity=0.265 Sum_probs=36.8
Q ss_pred ccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.++++++|=-|++.| +|.. +++.|++|+++|. .+.++.+...+...+. .++.+...|..+
T Consensus 38 ~l~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dv~d 102 (293)
T 3rih_A 38 DLSARSVLVTGGTKG-IGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA-----GNVIGVRLDVSD 102 (293)
T ss_dssp CCTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS-----SCEEEEECCTTC
T ss_pred CCCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-----CcEEEEEEeCCC
Confidence 357888998888755 3444 4456999999998 6655555444433221 245555666443
No 467
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=56.67 E-value=39 Score=26.35 Aligned_cols=57 Identities=26% Similarity=0.264 Sum_probs=34.3
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEE-eh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCC
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILT-DL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWG 184 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~t-D~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~ 184 (210)
++++++|=-|++.| +|.. +++.|++|+++ +. .+..+.+.+.+...+ .++.+...|..
T Consensus 6 l~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~ 68 (259)
T 3edm_A 6 FTNRTIVVAGAGRD-IGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG------RSALAIKADLT 68 (259)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT------SCCEEEECCTT
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------CceEEEEcCCC
Confidence 57889999998766 3433 44569999888 44 455554444444332 23455555543
No 468
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=56.60 E-value=35 Score=26.97 Aligned_cols=32 Identities=34% Similarity=0.459 Sum_probs=23.8
Q ss_pred ccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh
Q 028335 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL 152 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~ 152 (210)
.++++++|=-|++.| +|.. +++.|++|+++|.
T Consensus 28 ~l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r 63 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSG-IGRAIAHGYARAGAHVLAWGR 63 (273)
T ss_dssp CCTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEcC
Confidence 367899999998765 3443 4456999999997
No 469
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=56.41 E-value=16 Score=29.65 Aligned_cols=45 Identities=24% Similarity=0.364 Sum_probs=28.6
Q ss_pred ccCCCEEEEECCcc-C-HHHHHHHHcCC-EEEEEeh-HHHHHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC-G-LVGCIAALLGA-QVILTDL-PDRLRLLKKNIE 164 (210)
Q Consensus 120 ~~~~~~VLELGcGt-G-l~~l~la~~g~-~Vv~tD~-~~~l~~~~~N~~ 164 (210)
.++++++|=+|+|- | .+...++..|+ +|+.++. .+..+.+.+.+.
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~ 172 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVIN 172 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
Confidence 35789999999972 2 22333455687 7999988 655444444433
No 470
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=56.34 E-value=16 Score=33.99 Aligned_cols=42 Identities=29% Similarity=0.339 Sum_probs=33.1
Q ss_pred CEEEEECCcc-C-HHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHH
Q 028335 124 KKIVELGSGC-G-LVGCIAALLGAQVILTDL-PDRLRLLKKNIEN 165 (210)
Q Consensus 124 ~~VLELGcGt-G-l~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~ 165 (210)
++|-=||+|+ | -++..++..|..|+..|. ++.++.++..+..
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~ 361 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITF 361 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHH
Confidence 5899999998 3 566667778999999999 8887777665543
No 471
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=55.50 E-value=42 Score=26.44 Aligned_cols=61 Identities=21% Similarity=0.211 Sum_probs=36.7
Q ss_pred cCCCEEEEECCccCHHHHHH----HHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIA----ALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~l----a~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=.|++.| +|..+ ++.|++|+++|. ++.++.+.+.+...+.. ..++.+...|..+
T Consensus 4 l~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~ 69 (280)
T 1xkq_A 4 FSNKTVIITGSSNG-IGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVS---EKQVNSVVADVTT 69 (280)
T ss_dssp TTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC---GGGEEEEECCTTS
T ss_pred CCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCC---CcceEEEEecCCC
Confidence 46788888887654 44444 445899999998 66665555554432210 0135556666543
No 472
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=54.53 E-value=17 Score=28.97 Aligned_cols=36 Identities=28% Similarity=0.483 Sum_probs=28.0
Q ss_pred cccCCCEEEEECCccCH---HHHHHHHcCCEEEEEeh-HH
Q 028335 119 LLLHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PD 154 (210)
Q Consensus 119 ~~~~~~~VLELGcGtGl---~~l~la~~g~~Vv~tD~-~~ 154 (210)
.+|+||++|==|++.|+ ++..+++.|++|+.+|. .+
T Consensus 7 dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~ 46 (242)
T 4b79_A 7 DIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDAD 46 (242)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36799999999999874 34445566999999998 54
No 473
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=54.33 E-value=32 Score=26.69 Aligned_cols=41 Identities=27% Similarity=0.332 Sum_probs=28.3
Q ss_pred cCCCEEEEECCccCH---HHHHHHHcCCEEEEEeh-HHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 121 ~~~~~VLELGcGtGl---~~l~la~~g~~Vv~tD~-~~~l~~~~~ 161 (210)
++++++|=.|++.|+ +...+++.|++|+++|. +..++.+.+
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 51 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAG 51 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 578899999987653 22334456999999998 665554444
No 474
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=53.64 E-value=35 Score=27.35 Aligned_cols=45 Identities=31% Similarity=0.319 Sum_probs=29.8
Q ss_pred ccCCCEEEEECCcc--CH---HHHHHHHcCCEEEEEeh-HHHHHHHHHHHH
Q 028335 120 LLHGKKIVELGSGC--GL---VGCIAALLGAQVILTDL-PDRLRLLKKNIE 164 (210)
Q Consensus 120 ~~~~~~VLELGcGt--Gl---~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~ 164 (210)
.++++++|=.|++. |+ ++..+++.|++|+++|. ....+.+++-..
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~ 77 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAE 77 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHH
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Confidence 35788999999864 43 34445566999999998 554444444333
No 475
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=53.52 E-value=5 Score=31.95 Aligned_cols=32 Identities=25% Similarity=0.411 Sum_probs=23.2
Q ss_pred cCCCEEEEECCcc-C-HHHHHHHHcCC-EEEEEeh
Q 028335 121 LHGKKIVELGSGC-G-LVGCIAALLGA-QVILTDL 152 (210)
Q Consensus 121 ~~~~~VLELGcGt-G-l~~l~la~~g~-~Vv~tD~ 152 (210)
+++++|+=+|||. | .+...|++.|. +++.+|.
T Consensus 29 l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~ 63 (249)
T 1jw9_B 29 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF 63 (249)
T ss_dssp HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 4678999999984 4 33444556686 8999987
No 476
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=53.50 E-value=59 Score=25.86 Aligned_cols=59 Identities=24% Similarity=0.291 Sum_probs=35.7
Q ss_pred ccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HH-HHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PD-RLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~-~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
.++++++|=-|++.| +|.. +++.|++|+++|. .. ..+.+++-+...+ .++.+...|..+
T Consensus 44 ~l~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d 108 (291)
T 3ijr_A 44 KLKGKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG------VKCVLLPGDLSD 108 (291)
T ss_dssp TTTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT------CCEEEEESCTTS
T ss_pred CCCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC------CcEEEEECCCCC
Confidence 357899999998765 3444 4445999999988 43 3444444333332 235555666443
No 477
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=53.42 E-value=70 Score=24.14 Aligned_cols=57 Identities=21% Similarity=0.166 Sum_probs=34.8
Q ss_pred CCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 123 GKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 123 ~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++|=.|++.| +|..++ +.|++|++++. .+.++.+.+.+..... .++.+...|..+
T Consensus 2 ~k~vlITGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~ 63 (235)
T 3l77_A 2 MKVAVITGASRG-IGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-----VEVFYHHLDVSK 63 (235)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-----CCEEEEECCTTC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-----CeEEEEEeccCC
Confidence 567888887654 455444 45899999998 6666665555542211 235566666543
No 478
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=53.13 E-value=22 Score=30.62 Aligned_cols=32 Identities=34% Similarity=0.414 Sum_probs=23.8
Q ss_pred cCCCEEEEECCcc-CHHH-HHHHHcCCEEEEEeh
Q 028335 121 LHGKKIVELGSGC-GLVG-CIAALLGAQVILTDL 152 (210)
Q Consensus 121 ~~~~~VLELGcGt-Gl~~-l~la~~g~~Vv~tD~ 152 (210)
+++++|+=+|.|. |.-. ..+.++|++|+++|.
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeC
Confidence 5788999999986 4322 224456999999998
No 479
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=53.07 E-value=29 Score=26.65 Aligned_cols=42 Identities=29% Similarity=0.510 Sum_probs=29.2
Q ss_pred cccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHH
Q 028335 119 LLLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 119 ~~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~ 161 (210)
...++++||=.|++.| +|.. +++.|++|++++. .+.++.+.+
T Consensus 10 ~~~~~k~vlVTGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 56 (249)
T 3f9i_A 10 IDLTGKTSLITGASSG-IGSAIARLLHKLGSKVIISGSNEEKLKSLGN 56 (249)
T ss_dssp CCCTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 3468899999998755 4444 3445899999998 665554443
No 480
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=53.04 E-value=32 Score=26.63 Aligned_cols=40 Identities=30% Similarity=0.442 Sum_probs=27.9
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKK 161 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~ 161 (210)
++++++|=-|++.| +|.. +++.|++|+++|. ++.++.+..
T Consensus 4 l~gk~vlVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~ 48 (247)
T 3rwb_A 4 LAGKTALVTGAAQG-IGKAIAARLAADGATVIVSDINAEGAKAAAA 48 (247)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred cCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 57889999998765 3443 4456999999998 665544433
No 481
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=52.39 E-value=55 Score=26.14 Aligned_cols=61 Identities=30% Similarity=0.284 Sum_probs=36.9
Q ss_pred cCCCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=.|++.| +|..++ +.|++|++++. ++.++.+.+.+...+.. ..++.+...|..+
T Consensus 24 l~~k~vlVTGas~g-IG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~~~Dv~d 89 (297)
T 1xhl_A 24 FSGKSVIITGSSNG-IGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP---AEKINAVVADVTE 89 (297)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---GGGEEEEECCTTS
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC---CceEEEEecCCCC
Confidence 47788888887654 455444 45899999998 66665555555433210 0135555666543
No 482
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=52.29 E-value=32 Score=27.31 Aligned_cols=42 Identities=29% Similarity=0.386 Sum_probs=28.9
Q ss_pred cCCCEEEEECCccCH---HHHHHHHcCCEEEEEeh-HHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGL---VGCIAALLGAQVILTDL-PDRLRLLKKN 162 (210)
Q Consensus 121 ~~~~~VLELGcGtGl---~~l~la~~g~~Vv~tD~-~~~l~~~~~N 162 (210)
++++++|=-|++.|+ ++..+++.|++|+++|. ++.++.+.+.
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~ 72 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATK 72 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 578899999987663 23334556999999998 6655544433
No 483
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=52.24 E-value=61 Score=25.09 Aligned_cols=60 Identities=17% Similarity=0.200 Sum_probs=36.0
Q ss_pred cCCCEEEEECCc--cCH---HHHHHHHcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSG--CGL---VGCIAALLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcG--tGl---~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=.|++ .|+ ++..+++.|++|++++. ....+.+++-....+. .++.+..+|..+
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~ 70 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR-----NDSIILPCDVTN 70 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS-----CCCEEEECCCSS
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC-----CCceEEeCCCCC
Confidence 578899999976 443 33345566999999987 5444444443332221 245666666544
No 484
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=52.22 E-value=28 Score=27.43 Aligned_cols=41 Identities=22% Similarity=0.386 Sum_probs=28.7
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKN 162 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N 162 (210)
++++++|=.|++.| +|.. +++.|++|+++|. .+.++.+.+.
T Consensus 28 l~~k~vlVTGas~G-IG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~ 73 (281)
T 3ppi_A 28 FEGASAIVSGGAGG-LGEATVRRLHADGLGVVIADLAAEKGKALADE 73 (281)
T ss_dssp GTTEEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred cCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Confidence 57889999998765 4444 3445999999998 6655544443
No 485
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=51.49 E-value=31 Score=26.76 Aligned_cols=41 Identities=29% Similarity=0.323 Sum_probs=28.4
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh-HHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL-PDRLRLLKKN 162 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~-~~~l~~~~~N 162 (210)
++++++|=-|++.| +|.. +++.|++|+++|. ++.++.+.+.
T Consensus 7 l~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~ 52 (248)
T 3op4_A 7 LEGKVALVTGASRG-IGKAIAELLAERGAKVIGTATSESGAQAISDY 52 (248)
T ss_dssp CTTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 57889999998765 3444 4456999999998 6655544443
No 486
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=51.42 E-value=48 Score=27.82 Aligned_cols=79 Identities=10% Similarity=-0.021 Sum_probs=42.2
Q ss_pred CCCEEEEECCccCHHHHHHHHc----CCEEEEEeh-HH---HHHHHHHHHHHhccC---CCCCCceEEEEeeCCCCCCCC
Q 028335 122 HGKKIVELGSGCGLVGCIAALL----GAQVILTDL-PD---RLRLLKKNIENNLRH---GDLRGSAVVTELTWGDDPDQD 190 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la~~----g~~Vv~tD~-~~---~l~~~~~N~~~n~~~---~~~~~~~~~~~l~w~~~~~~~ 190 (210)
++++||=.|+ +|.+|..+++. |++|++++. +. .+..+++++...... ......+.+...|..+.....
T Consensus 68 ~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 68 PLGNTLLTGA-TGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCEEEEEECT-TSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCEEEEecC-CcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 4568888886 57777776643 668999987 44 555555554332100 000124666666665432222
Q ss_pred ccCCCCcEEEEc
Q 028335 191 LIQPLPDYGNES 202 (210)
Q Consensus 191 ~~~~~fD~Iia~ 202 (210)
....+|+||-+
T Consensus 147 -~~~~~d~Vih~ 157 (427)
T 4f6c_A 147 -LPENMDTIIHA 157 (427)
T ss_dssp -CSSCCSEEEEC
T ss_pred -CcCCCCEEEEC
Confidence 23466777643
No 487
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=51.36 E-value=26 Score=26.71 Aligned_cols=37 Identities=14% Similarity=0.191 Sum_probs=24.8
Q ss_pred ccCCCEEEEECCccCHHHHHHHH----cCCEEEEEeh-HHHHH
Q 028335 120 LLHGKKIVELGSGCGLVGCIAAL----LGAQVILTDL-PDRLR 157 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~la~----~g~~Vv~tD~-~~~l~ 157 (210)
.+++++||=.|+ +|.+|..+++ .|++|++++. +..++
T Consensus 18 ~l~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~ 59 (236)
T 3e8x_A 18 YFQGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGP 59 (236)
T ss_dssp ---CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHH
T ss_pred CcCCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHH
Confidence 468899999986 4666666553 4889999998 55443
No 488
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=50.79 E-value=67 Score=24.76 Aligned_cols=44 Identities=16% Similarity=0.108 Sum_probs=29.5
Q ss_pred cCCCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHHHHHHH
Q 028335 121 LHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIEN 165 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~~N~~~ 165 (210)
+++++||=.|++. .+|..++ +.|++|++++. +..++.+...+..
T Consensus 12 l~~k~vlITGasg-giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 60 (266)
T 1xq1_A 12 LKAKTVLVTGGTK-GIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK 60 (266)
T ss_dssp CTTCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 5778899888754 4555544 45899999998 6655555554443
No 489
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=50.76 E-value=85 Score=24.68 Aligned_cols=59 Identities=22% Similarity=0.246 Sum_probs=36.5
Q ss_pred cCCCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
+++++||=.|++. .+|..++ +.|++|++++. +..++.+.+.+.... . .++.+...|..+
T Consensus 24 l~~k~vlITGasg-giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~----~~~~~~~~Dl~~ 87 (302)
T 1w6u_A 24 FQGKVAFITGGGT-GLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-G----NKVHAIQCDVRD 87 (302)
T ss_dssp TTTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-S----SCEEEEECCTTC
T ss_pred CCCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-C----CceEEEEeCCCC
Confidence 5778899898764 4555544 45899999998 666555555443321 1 235556666543
No 490
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=50.55 E-value=75 Score=24.89 Aligned_cols=32 Identities=31% Similarity=0.414 Sum_probs=23.6
Q ss_pred ccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh
Q 028335 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL 152 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~ 152 (210)
.++++++|=-|++.|+ |.. +++.|++|+++|.
T Consensus 12 ~l~gk~~lVTGas~gI-G~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQ-GRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp TTTTCEEEEESTTSHH-HHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCEEEEECCCcHH-HHHHHHHHHHCCCEEEEEec
Confidence 3688999999987653 433 4456999999985
No 491
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=50.39 E-value=87 Score=24.56 Aligned_cols=58 Identities=33% Similarity=0.375 Sum_probs=35.8
Q ss_pred ccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh--HHHHHHHHHHHHHhccCCCCCCceEEEEeeCC
Q 028335 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL--PDRLRLLKKNIENNLRHGDLRGSAVVTELTWG 184 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~--~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~ 184 (210)
.++++++|=-|++.|+ |.. +++.|++|++++. ...++.+.+.+...+ .++.+...|..
T Consensus 28 ~l~gk~~lVTGas~GI-G~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~Dv~ 91 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGI-GAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG------GRAVAIRADNR 91 (271)
T ss_dssp CCTTCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTT
T ss_pred CCCCCEEEEeCCCcHH-HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC------CcEEEEECCCC
Confidence 3688999999987653 433 4456999999876 344555555444332 23555555543
No 492
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=50.18 E-value=86 Score=24.43 Aligned_cols=32 Identities=31% Similarity=0.407 Sum_probs=23.4
Q ss_pred ccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh
Q 028335 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL 152 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~ 152 (210)
.+++++||=-|++.| +|.. +++.|++|+++|.
T Consensus 7 ~l~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~ 42 (287)
T 3pxx_A 7 RVQDKVVLVTGGARG-QGRSHAVKLAEEGADIILFDI 42 (287)
T ss_dssp TTTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcc
Confidence 357889999998765 3443 4456999999985
No 493
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=49.81 E-value=65 Score=25.55 Aligned_cols=59 Identities=15% Similarity=0.077 Sum_probs=36.5
Q ss_pred cCCCEEEEECCccCHHHHHHH----HcCCEEEEEe-h-HHHHHHHHHHHH-HhccCCCCCCceEEEEeeCCCC
Q 028335 121 LHGKKIVELGSGCGLVGCIAA----LLGAQVILTD-L-PDRLRLLKKNIE-NNLRHGDLRGSAVVTELTWGDD 186 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~la----~~g~~Vv~tD-~-~~~l~~~~~N~~-~n~~~~~~~~~~~~~~l~w~~~ 186 (210)
++++++|=.|++.| +|..++ +.|++|++++ . ++.++.+.+.+. ..+ .++.+..+|..+.
T Consensus 7 l~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~Dl~~~ 72 (291)
T 1e7w_A 7 PTVPVALVTGAAKR-LGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP------NSAITVQADLSNV 72 (291)
T ss_dssp -CCCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST------TCEEEEECCCSSS
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC------CeeEEEEeecCCc
Confidence 46788888887755 455444 4589999999 7 666655555543 222 2455666665443
No 494
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=49.80 E-value=70 Score=25.07 Aligned_cols=58 Identities=19% Similarity=0.195 Sum_probs=35.8
Q ss_pred cCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh--HHHHHHHHHHHHHhccCCCCCCceEEEEeeCCC
Q 028335 121 LHGKKIVELGSGCGLVGCI----AALLGAQVILTDL--PDRLRLLKKNIENNLRHGDLRGSAVVTELTWGD 185 (210)
Q Consensus 121 ~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~--~~~l~~~~~N~~~n~~~~~~~~~~~~~~l~w~~ 185 (210)
++++++|=-|++.| +|.. +++.|++|+.++. ...++.+.+.+...+ ..+.+...|..+
T Consensus 26 l~~k~vlVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~D~~d 89 (269)
T 4dmm_A 26 LTDRIALVTGASRG-IGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG------GEAFAVKADVSQ 89 (269)
T ss_dssp TTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTS
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC------CcEEEEECCCCC
Confidence 57888998887765 3443 4456999999887 345555555544432 235555666443
No 495
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=49.77 E-value=86 Score=24.92 Aligned_cols=32 Identities=28% Similarity=0.328 Sum_probs=23.4
Q ss_pred cCCCEEEEECCccCH---HHHHHHHcCCEEEEEeh
Q 028335 121 LHGKKIVELGSGCGL---VGCIAALLGAQVILTDL 152 (210)
Q Consensus 121 ~~~~~VLELGcGtGl---~~l~la~~g~~Vv~tD~ 152 (210)
++++++|=-|++.|+ ++..+++.|++|+++|.
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~ 60 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDV 60 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEec
Confidence 578899999987763 22334456999999885
No 496
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=49.49 E-value=10 Score=26.33 Aligned_cols=33 Identities=21% Similarity=0.467 Sum_probs=22.3
Q ss_pred CCCEEEEECCccCHHHHHHH----HcCCEEEEEeh-HHHH
Q 028335 122 HGKKIVELGSGCGLVGCIAA----LLGAQVILTDL-PDRL 156 (210)
Q Consensus 122 ~~~~VLELGcGtGl~~l~la----~~g~~Vv~tD~-~~~l 156 (210)
++++|+=+|+ |.+|..++ +.|.+|+++|. ++.+
T Consensus 5 ~~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~ 42 (144)
T 2hmt_A 5 KNKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKV 42 (144)
T ss_dssp -CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHH
T ss_pred cCCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 5667999997 45555444 34788999998 6543
No 497
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=49.44 E-value=89 Score=24.40 Aligned_cols=32 Identities=28% Similarity=0.372 Sum_probs=23.6
Q ss_pred ccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh
Q 028335 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL 152 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~ 152 (210)
.++++++|=-|++.| +|.. +++.|++|+++|.
T Consensus 7 ~l~~k~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 7 DFEGKTALITGGARG-MGRSHAVALAEAGADIAICDR 42 (281)
T ss_dssp TTTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeC
Confidence 357889999998765 4444 4455999999986
No 498
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=49.43 E-value=23 Score=31.16 Aligned_cols=42 Identities=31% Similarity=0.456 Sum_probs=31.0
Q ss_pred CEEEEECCcc-C-HHHHHHHHcCCEEEEEeh-HHHHHHHHHHHHH
Q 028335 124 KKIVELGSGC-G-LVGCIAALLGAQVILTDL-PDRLRLLKKNIEN 165 (210)
Q Consensus 124 ~~VLELGcGt-G-l~~l~la~~g~~Vv~tD~-~~~l~~~~~N~~~ 165 (210)
++|-=||+|. | .++..+++.|.+|++.|. ++.++.+++.+..
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~ 50 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHA 50 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHH
Confidence 4577788886 3 456666777999999999 8888777665543
No 499
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=49.27 E-value=92 Score=24.25 Aligned_cols=32 Identities=38% Similarity=0.418 Sum_probs=23.4
Q ss_pred ccCCCEEEEECCccCHHHHH----HHHcCCEEEEEeh
Q 028335 120 LLHGKKIVELGSGCGLVGCI----AALLGAQVILTDL 152 (210)
Q Consensus 120 ~~~~~~VLELGcGtGl~~l~----la~~g~~Vv~tD~ 152 (210)
.++++++|=-|++.| +|.. +++.|++|+++|.
T Consensus 10 ~l~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r 45 (278)
T 3sx2_A 10 PLTGKVAFITGAARG-QGRAHAVRLAADGADIIAVDL 45 (278)
T ss_dssp TTTTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEec
Confidence 367899999998755 3443 4456999999985
No 500
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=49.10 E-value=81 Score=24.73 Aligned_cols=32 Identities=28% Similarity=0.351 Sum_probs=23.5
Q ss_pred cCCCEEEEECCccCH---HHHHHHHcCCEEEEEeh
Q 028335 121 LHGKKIVELGSGCGL---VGCIAALLGAQVILTDL 152 (210)
Q Consensus 121 ~~~~~VLELGcGtGl---~~l~la~~g~~Vv~tD~ 152 (210)
++++++|=-|++.|+ ++..+++.|++|+++|.
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEec
Confidence 578999999988763 23334456999999986
Done!