Your job contains 1 sequence.
>028336
MAQITSQGGLNLLFNGDGSSFGVEPRDPFQYKLGSGLRSIEVHKRKLIRPRNGVWSSMNK
KKSSKFSVDASLNVSGKGISGESEEYDSDEEFDELACFRGLVLDISYRPVNVVCWKRAIC
LEFMEKADVLEYYDQTINSPNGSFYIPAVLRVRHLLQVVKRRRIKNNLSRKNLMYRDNFT
CQYCSSRENLTIDHVVPASRGGEWKWENLV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028336
(210 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2061476 - symbol:AT2G23840 species:3702 "Arabi... 553 1.1e-58 2
UNIPROTKB|Q0BWS6 - symbol:HNE_3394 "HNH endonuclease doma... 209 5.3e-17 1
TIGR_CMR|SPO_2123 - symbol:SPO_2123 "HNH endonuclease fam... 203 2.3e-16 1
UNIPROTKB|O53196 - symbol:Rv2469c "Uncharacterized protei... 201 3.7e-16 1
UNIPROTKB|Q3Z918 - symbol:DET0537 "HNH endonuclease domai... 192 3.3e-15 1
TIGR_CMR|DET_0537 - symbol:DET_0537 "HNH endonuclease dom... 192 3.3e-15 1
>TAIR|locus:2061476 [details] [associations]
symbol:AT2G23840 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0009269 "response to desiccation" evidence=RCA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009651 "response
to salt stress" evidence=RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=RCA] InterPro:IPR002711 Pfam:PF01844
EMBL:CP002685 GO:GO:0003676 GO:GO:0004519 InterPro:IPR003615
SMART:SM00507 EMBL:BT010946 EMBL:BT011660 IPI:IPI00530416
RefSeq:NP_179964.2 UniGene:At.21838 ProteinModelPortal:Q6NMJ9
SMR:Q6NMJ9 STRING:Q6NMJ9 PRIDE:Q6NMJ9 EnsemblPlants:AT2G23840.1
GeneID:816916 KEGG:ath:AT2G23840 TAIR:At2g23840
HOGENOM:HOG000143356 InParanoid:Q6NMJ9 OMA:WEWENLV PhylomeDB:Q6NMJ9
ProtClustDB:CLSN2690885 Genevestigator:Q6NMJ9 Uniprot:Q6NMJ9
Length = 284
Score = 553 (199.7 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 98/116 (84%), Positives = 111/116 (95%)
Query: 95 LACFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTINSPNGSFYIPAVLRVRH 154
L+CFRGLVLDISYRPVNVVCWKRAICLE+M+KADVLEYYDQT++SP GSFYIPAVLRV H
Sbjct: 101 LSCFRGLVLDISYRPVNVVCWKRAICLEYMDKADVLEYYDQTVSSPTGSFYIPAVLRVPH 160
Query: 155 LLQVVKRRRIKNNLSRKNLMYRDNFTCQYCSSRENLTIDHVVPASRGGEWKWENLV 210
LLQVVKRRR+KN+LSRKN++ RD++TCQYCSSRENLTIDHV+P SRGGEW W+NLV
Sbjct: 161 LLQVVKRRRVKNSLSRKNILLRDDYTCQYCSSRENLTIDHVMPVSRGGEWTWQNLV 216
Score = 67 (28.6 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 1 MAQITSQGGLNLLFNGDGSSFGVEPRDPFQ---YKLGSGLRSIEVHKRKL 47
MA +++ L LL + DG SFGV+ RD F+ Y G G + + +L
Sbjct: 1 MAHFSAR--LKLLSSNDGLSFGVDSRDQFRQSLYMAGGGSPLVPIRMSRL 48
>UNIPROTKB|Q0BWS6 [details] [associations]
symbol:HNE_3394 "HNH endonuclease domain protein"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002711 Pfam:PF01844 GO:GO:0003676
GO:GO:0004519 InterPro:IPR003615 SMART:SM00507 EMBL:CP000158
GenomeReviews:CP000158_GR eggNOG:COG1403 RefSeq:YP_762067.1
ProteinModelPortal:Q0BWS6 STRING:Q0BWS6 GeneID:4287943
KEGG:hne:HNE_3394 PATRIC:32219667 HOGENOM:HOG000239597 OMA:MGRKFPP
ProtClustDB:CLSK2532138 BioCyc:HNEP228405:GI69-3396-MONOMER
Uniprot:Q0BWS6
Length = 197
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 38/106 (35%), Positives = 63/106 (59%)
Query: 105 ISYRPVNVVCWKRAICLEFMEKADVLEYYDQTINSPNGSFYIPAVLRVRHLLQVVKRRRI 164
+SY P+++ W+ I F+++ D++ YD + SP+ +P+V+ +R V++ R
Sbjct: 34 LSYYPLSLWPWQEVIKAVFLDRVDIIAEYDYVVRSPSREMRLPSVIALRDF---VRQDRA 90
Query: 165 KNNLSRKNLMYRDNFTCQYCSSRENLTIDHVVPASRGGEWKWENLV 210
+R N+ RD F C YC + +NLT DHV+P S+GG WEN+V
Sbjct: 91 PA-FTRFNVFLRDGFKCAYCGAHDNLTFDHVIPRSKGGRTTWENIV 135
>TIGR_CMR|SPO_2123 [details] [associations]
symbol:SPO_2123 "HNH endonuclease family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0006259 "DNA metabolic process"
evidence=ISS] InterPro:IPR002711 Pfam:PF01844 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 GO:GO:0004519
InterPro:IPR003615 SMART:SM00507 HOGENOM:HOG000239597 OMA:MGRKFPP
RefSeq:YP_167351.1 ProteinModelPortal:Q5LRK4 DNASU:3193103
GeneID:3193103 KEGG:sil:SPO2123 PATRIC:23377589
ProtClustDB:CLSK933768 Uniprot:Q5LRK4
Length = 194
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 39/106 (36%), Positives = 64/106 (60%)
Query: 105 ISYRPVNVVCWKRAICLEFMEKADVLEYYDQTINSPNGSFYIPAVLRVRHLLQVVKRRRI 164
+SY P+++ W+ AI ++++ D++ YD+ + SP+ IP+V+ ++ ++ KR
Sbjct: 31 LSYYPLSLWPWQEAIKAAWLDRVDIIAEYDEVVRSPSVVLRIPSVVVLKDYVKPQKRVAF 90
Query: 165 KNNLSRKNLMYRDNFTCQYCSSRENLTIDHVVPASRGGEWKWENLV 210
+R NL RD F CQYC + +LT DHVVP + GG WEN+V
Sbjct: 91 ----TRFNLFLRDEFRCQYCGGKGDLTFDHVVPRAAGGVTSWENVV 132
>UNIPROTKB|O53196 [details] [associations]
symbol:Rv2469c "Uncharacterized protein" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0005576 "extracellular
region" evidence=IDA] InterPro:IPR002711 Pfam:PF01844 GO:GO:0005576
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003676
EMBL:BX842579 GO:GO:0004519 InterPro:IPR003615 SMART:SM00507
EMBL:CP003248 PIR:D70866 RefSeq:NP_216985.1 RefSeq:NP_337031.1
RefSeq:YP_006515907.1 SMR:O53196 EnsemblBacteria:EBMYCT00000001546
EnsemblBacteria:EBMYCT00000069105 GeneID:13319182 GeneID:888591
GeneID:923185 KEGG:mtc:MT2545 KEGG:mtu:Rv2469c KEGG:mtv:RVBD_2469c
PATRIC:18127352 TubercuList:Rv2469c HOGENOM:HOG000239596
OMA:KEWSKYV ProtClustDB:CLSK791867 Uniprot:O53196
Length = 222
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 45/115 (39%), Positives = 70/115 (60%)
Query: 99 RGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQT---INSPNGSFYIPAVLRVRHL 155
R L+L+ +Y P+ + +RAI + KADV+ + D + I+S S +P+V+++R
Sbjct: 56 RVLLLNSTYEPLTALSMRRAIVMVICGKADVV-HEDPSGPVIHSATRSILVPSVIQLRSY 114
Query: 156 LQVVKRRRIKNNLSRKNLMYRDNFTCQYCSSRENLTIDHVVPASRGGEWKWENLV 210
++V R R+ ++R LM+RD F C YC + + T+DHVVP SRGG WEN V
Sbjct: 115 VRVPYRARVP--MTRAALMHRDRFCCAYCGGKAD-TVDHVVPRSRGGAHSWENCV 166
>UNIPROTKB|Q3Z918 [details] [associations]
symbol:DET0537 "HNH endonuclease domain protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002711 Pfam:PF01844
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0004519
InterPro:IPR003615 SMART:SM00507 eggNOG:COG1403
HOGENOM:HOG000239596 RefSeq:YP_181281.1 ProteinModelPortal:Q3Z918
STRING:Q3Z918 GeneID:3230145 KEGG:det:DET0537 PATRIC:21608141
OMA:GSIRHEW ProtClustDB:CLSK837428
BioCyc:DETH243164:GJNF-537-MONOMER Uniprot:Q3Z918
Length = 177
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 43/111 (38%), Positives = 65/111 (58%)
Query: 101 LVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTINSPNGSFYIPAVLRVRHLLQVVK 160
LVL+ Y+P+NV +RA+ L + KA++LE +S F +P+V+R+ L +K
Sbjct: 7 LVLNQDYQPLNVCHVRRAVLLVYQSKAEMLENGSGFWHSEKDLFALPSVIRLSCL---IK 63
Query: 161 RRRIKNNLSRKNLMYRDNFTCQYCSSRE-NLTIDHVVPASRGGEWKWENLV 210
++ L+R + RD TCQYC ++ LTIDHV P +GG WEN+V
Sbjct: 64 HPPLRPKLNRAEIFSRDKHTCQYCGRKDLELTIDHVNPKHQGGPHVWENVV 114
>TIGR_CMR|DET_0537 [details] [associations]
symbol:DET_0537 "HNH endonuclease domain protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002711 Pfam:PF01844 GO:GO:0003676
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0004519
InterPro:IPR003615 SMART:SM00507 eggNOG:COG1403
HOGENOM:HOG000239596 RefSeq:YP_181281.1 ProteinModelPortal:Q3Z918
STRING:Q3Z918 GeneID:3230145 KEGG:det:DET0537 PATRIC:21608141
OMA:GSIRHEW ProtClustDB:CLSK837428
BioCyc:DETH243164:GJNF-537-MONOMER Uniprot:Q3Z918
Length = 177
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 43/111 (38%), Positives = 65/111 (58%)
Query: 101 LVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTINSPNGSFYIPAVLRVRHLLQVVK 160
LVL+ Y+P+NV +RA+ L + KA++LE +S F +P+V+R+ L +K
Sbjct: 7 LVLNQDYQPLNVCHVRRAVLLVYQSKAEMLENGSGFWHSEKDLFALPSVIRLSCL---IK 63
Query: 161 RRRIKNNLSRKNLMYRDNFTCQYCSSRE-NLTIDHVVPASRGGEWKWENLV 210
++ L+R + RD TCQYC ++ LTIDHV P +GG WEN+V
Sbjct: 64 HPPLRPKLNRAEIFSRDKHTCQYCGRKDLELTIDHVNPKHQGGPHVWENVV 114
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.435 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 210 183 0.00076 110 3 11 22 0.40 32
31 0.40 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 603 (64 KB)
Total size of DFA: 174 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.47u 0.12s 14.59t Elapsed: 00:00:00
Total cpu time: 14.47u 0.12s 14.59t Elapsed: 00:00:00
Start: Fri May 10 14:41:50 2013 End: Fri May 10 14:41:50 2013