Your job contains 1 sequence.
>028337
MGSSSDRLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSL
VSSVLLLLIAILFLWAKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDM
ALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILG
YRKLRQLYVKIDEEFVSKVRKWILEKQKLS
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028337
(210 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2080315 - symbol:AT3G54120 "AT3G54120" species... 458 2.2e-43 1
TAIR|locus:1005716554 - symbol:AT3G10915 species:3702 "Ar... 324 1.3e-34 2
TAIR|locus:2160447 - symbol:BTI3 "VIRB2-interacting prote... 342 4.2e-31 1
TAIR|locus:2062882 - symbol:AT2G46170 species:3702 "Arabi... 330 7.9e-30 1
TAIR|locus:2128494 - symbol:BTI1 "VIRB2-interacting prote... 323 4.4e-29 1
TAIR|locus:2049077 - symbol:AT2G15280 "AT2G15280" species... 318 1.5e-28 1
TAIR|locus:2128238 - symbol:BTI2 "VIRB2-interacting prote... 316 2.4e-28 1
TAIR|locus:2089663 - symbol:AT3G18260 "AT3G18260" species... 286 3.6e-25 1
TAIR|locus:2090609 - symbol:AT3G19460 "AT3G19460" species... 157 6.9e-23 2
TAIR|locus:2082772 - symbol:AT3G61560 species:3702 "Arabi... 137 1.6e-16 2
TAIR|locus:2046783 - symbol:RTNLB13 "AT2G23640" species:3... 176 1.6e-13 1
UNIPROTKB|F1P5B2 - symbol:Gga.4205 "Uncharacterized prote... 136 1.4e-08 1
UNIPROTKB|E1BUW7 - symbol:Gga.4205 "Uncharacterized prote... 130 4.4e-07 1
UNIPROTKB|F1NH22 - symbol:RTN1 "Uncharacterized protein" ... 126 4.7e-07 1
UNIPROTKB|F1Q2B3 - symbol:RTN1 "Uncharacterized protein" ... 130 1.4e-06 1
ZFIN|ZDB-GENE-030710-3 - symbol:rtn1b "reticulon 1b" spec... 128 3.6e-06 1
UNIPROTKB|F1NCK0 - symbol:Gga.4205 "Uncharacterized prote... 118 6.5e-06 1
UNIPROTKB|F1NH23 - symbol:RTN1 "Uncharacterized protein" ... 126 7.5e-06 1
UNIPROTKB|Q6IFY7 - symbol:rtn1-a "Reticulon-1-A" species:... 118 7.8e-06 1
UNIPROTKB|F1P5B1 - symbol:Gga.4205 "Uncharacterized prote... 121 1.0e-05 1
UNIPROTKB|F8W914 - symbol:RTN4 "Reticulon-4" species:9606... 121 1.1e-05 1
UNIPROTKB|Q7YRW9 - symbol:RTN4 "Uncharacterized protein" ... 116 1.2e-05 1
UNIPROTKB|Q6IM70 - symbol:RTN4 "RTN4-C" species:9823 "Sus... 116 1.2e-05 1
UNIPROTKB|Q1RMR8 - symbol:RTN4 "RTN4 protein" species:991... 121 1.4e-05 1
UNIPROTKB|Q1LZ76 - symbol:RTN1 "Uncharacterized protein" ... 116 1.5e-05 1
UNIPROTKB|F1PNX5 - symbol:RTN1 "Uncharacterized protein" ... 116 1.5e-05 1
UNIPROTKB|A8MT72 - symbol:RTN1 "Reticulon-1" species:9606... 115 1.5e-05 1
UNIPROTKB|G3X7U3 - symbol:LOC100847649 "Uncharacterized p... 102 1.5e-05 1
UNIPROTKB|I3LBH0 - symbol:RTN1 "Uncharacterized protein" ... 115 2.1e-05 1
UNIPROTKB|D4AEM9 - symbol:Rtn4 "Reticulon-4" species:1011... 123 3.1e-05 1
RGD|620989 - symbol:Rtn4 "reticulon 4" species:10116 "Rat... 123 3.5e-05 1
UNIPROTKB|F1LQN3 - symbol:Rtn4 "Reticulon-4" species:1011... 123 3.5e-05 1
MGI|MGI:1915835 - symbol:Rtn4 "reticulon 4" species:10090... 122 4.7e-05 1
UNIPROTKB|A7MC64 - symbol:rtn1 "Reticulon-1" species:8364... 120 5.4e-05 1
UNIPROTKB|F1NNJ7 - symbol:Gga.4205 "Uncharacterized prote... 118 8.3e-05 1
UNIPROTKB|F1NCP4 - symbol:Gga.4205 "Uncharacterized prote... 118 9.5e-05 2
UNIPROTKB|E1BP30 - symbol:E1BP30 "Uncharacterized protein... 116 0.00016 1
UNIPROTKB|F1Q231 - symbol:RTN1 "Uncharacterized protein" ... 116 0.00016 1
UNIPROTKB|H7C106 - symbol:RTN4 "Reticulon-4" species:9606... 108 0.00016 1
UNIPROTKB|F1N405 - symbol:RTN4 "Uncharacterized protein" ... 118 0.00017 1
UNIPROTKB|F8WAM4 - symbol:RTN4 "Reticulon-4" species:9606... 116 0.00024 1
UNIPROTKB|Q5MY90 - symbol:rtn1-b "Reticulon-1-B" species:... 115 0.00024 1
FB|FBgn0053113 - symbol:Rtnl1 "Reticulon-like1" species:7... 114 0.00024 1
UNIPROTKB|I3L6J1 - symbol:RTN1 "Uncharacterized protein" ... 115 0.00025 1
UNIPROTKB|Q16799 - symbol:RTN1 "Reticulon-1" species:9606... 115 0.00025 1
RGD|620986 - symbol:Rtn1 "reticulon 1" species:10116 "Rat... 115 0.00025 1
MGI|MGI:1933947 - symbol:Rtn1 "reticulon 1" species:10090... 115 0.00025 1
UNIPROTKB|E2R925 - symbol:RTN4 "Uncharacterized protein" ... 116 0.00030 1
UNIPROTKB|Q9NQC3 - symbol:RTN4 "Reticulon-4" species:9606... 116 0.00030 1
UNIPROTKB|J9P0R7 - symbol:RTN4 "Uncharacterized protein" ... 116 0.00031 1
UNIPROTKB|Q08D83 - symbol:RTN3 "Reticulon-3" species:9913... 106 0.00058 1
UNIPROTKB|D4A1U2 - symbol:Rtn3 "Reticulon 3, isoform CRA_... 106 0.00058 1
UNIPROTKB|F1RPY3 - symbol:RTN3 "Uncharacterized protein" ... 105 0.00063 1
ZFIN|ZDB-GENE-030131-2426 - symbol:rtn1a "reticulon 1a" s... 112 0.00064 1
>TAIR|locus:2080315 [details] [associations]
symbol:AT3G54120 "AT3G54120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005789 EMBL:AL132957
PANTHER:PTHR10994 UniGene:At.25009 UniGene:At.68442
HOGENOM:HOG000237479 EMBL:BT010698 EMBL:BT010978 EMBL:AK229371
IPI:IPI00519528 PIR:T47571 RefSeq:NP_190980.1
ProteinModelPortal:Q9M392 IntAct:Q9M392 EnsemblPlants:AT3G54120.1
GeneID:824579 KEGG:ath:AT3G54120 TAIR:At3g54120 eggNOG:NOG256441
InParanoid:Q9M392 OMA:LWAKAAR PhylomeDB:Q9M392
ProtClustDB:CLSN2685077 Genevestigator:Q9M392 Uniprot:Q9M392
Length = 203
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 89/192 (46%), Positives = 124/192 (64%)
Query: 1 MGSSSDRLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTXXXX 60
M SSSD+LF R RTIHEILGGG+ ADV+LWR+KNV+VGI+ VT+A+W+VFE YT
Sbjct: 1 MSSSSDKLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTL 60
Query: 61 XXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDM 120
NRP+PPLPE +SE M E + +R VN L VS D+
Sbjct: 61 ISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDI 120
Query: 121 ALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILG 180
A+ ++S L+ +VA+ L+L+S +G L DF TL +TS+++V+T+PA YERYED+I
Sbjct: 121 AMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFI 180
Query: 181 YRKLRQLYVKID 192
K R+LY++++
Sbjct: 181 CNKTRELYLRLE 192
>TAIR|locus:1005716554 [details] [associations]
symbol:AT3G10915 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 EMBL:CP002686 PANTHER:PTHR10994 IPI:IPI00938902
RefSeq:NP_001154603.1 UniGene:At.44168 ProteinModelPortal:F4J500
EnsemblPlants:AT3G10915.5 GeneID:820262 KEGG:ath:AT3G10915
OMA:HDITLGK Uniprot:F4J500
Length = 249
Score = 324 (119.1 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 65/187 (34%), Positives = 104/187 (55%)
Query: 23 LAADVILWRRKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXX 82
+AAD++LWRR+++++G+++++ AW++FE SG
Sbjct: 62 IAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFR 121
Query: 83 NRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFR-VALYLWLISF 141
NR LPEL LSEEMVN AA R ++N L ++ D+ +G + RLFF+ V + LWL+S
Sbjct: 122 NRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSA 181
Query: 142 VGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
+G TL Y ++ +T+PALY +Y+ +DK +R+L Y +DE +S++
Sbjct: 182 IGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRL-S 240
Query: 202 WILEKQK 208
W L K K
Sbjct: 241 WSLSKDK 247
Score = 67 (28.6 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 2 GSSSD-RLFKRQRTIHEILGGG 22
GSSSD RL RQ T+H+ +GGG
Sbjct: 18 GSSSDYRLLGRQITVHQFMGGG 39
>TAIR|locus:2160447 [details] [associations]
symbol:BTI3 "VIRB2-interacting protein 3" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IDA]
[GO:0071458 "integral to cytosolic side of endoplasmic reticulum
membrane" evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular
network" evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=IMP] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005233 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 GO:GO:0071782 EMBL:AY035169
EMBL:AY057638 EMBL:AY150449 IPI:IPI00523388 RefSeq:NP_198975.1
UniGene:At.8344 ProteinModelPortal:Q9FFS0 IntAct:Q9FFS0
STRING:Q9FFS0 PaxDb:Q9FFS0 PRIDE:Q9FFS0 EnsemblPlants:AT5G41600.1
GeneID:834162 KEGG:ath:AT5G41600 TAIR:At5g41600 InParanoid:Q9FFS0
OMA:VMWLLTY PhylomeDB:Q9FFS0 ProtClustDB:CLSN2682625
Genevestigator:Q9FFS0 Uniprot:Q9FFS0
Length = 257
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 67/206 (32%), Positives = 116/206 (56%)
Query: 7 RLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXX 66
RLF R++ +H++LGGG AD+ LWR K V+ G+L A+WV+FE Y
Sbjct: 51 RLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAI 110
Query: 67 XXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNS 126
++ P +PE+H+ E+ + ++ + +R +N L++ +++A GK+
Sbjct: 111 FALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDV 170
Query: 127 RLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQ 186
+ F V LW++S +G +FLTL YT+ V++ T+P LYE+YED +D Y R++++
Sbjct: 171 KKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKK 230
Query: 187 LYVKIDEEF----VSKVRKWILEKQK 208
Y +DE+ +SK+ + L K+K
Sbjct: 231 QYAVLDEKVLRKVISKIPRGALNKKK 256
>TAIR|locus:2062882 [details] [associations]
symbol:AT2G46170 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0080167 "response
to karrikin" evidence=IEP] [GO:0006007 "glucose catabolic process"
evidence=RCA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0080167 EMBL:AC005397
PANTHER:PTHR10994 eggNOG:NOG303514 HOGENOM:HOG000237479
EMBL:AY053421 EMBL:AY074836 IPI:IPI00521101 PIR:E84899
RefSeq:NP_566065.1 UniGene:At.13080 ProteinModelPortal:O82352
SMR:O82352 PaxDb:O82352 PRIDE:O82352 EnsemblPlants:AT2G46170.1
GeneID:819224 KEGG:ath:AT2G46170 TAIR:At2g46170 InParanoid:O82352
OMA:RPLICSI PhylomeDB:O82352 ProtClustDB:CLSN2688961
Genevestigator:O82352 Uniprot:O82352
Length = 255
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 68/193 (35%), Positives = 107/193 (55%)
Query: 7 RLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXX 66
R+F R++ +H++LGGG ADV LWR K ++ +L V A WV+FE Y
Sbjct: 51 RMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISI 110
Query: 67 XXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNS 126
N+ +P +PE+H+ EE VA+ +R +N + + +ALG++
Sbjct: 111 LALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDL 170
Query: 127 RLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQ 186
+ F V + LW+IS VG +FLTL Y VI+ T+P LYE++ED +D A ++L++
Sbjct: 171 KKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQK 230
Query: 187 LYVKIDEEFVSKV 199
YV DE+ +SK+
Sbjct: 231 QYVVFDEKVLSKI 243
>TAIR|locus:2128494 [details] [associations]
symbol:BTI1 "VIRB2-interacting protein 1" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0071458 "integral to
cytosolic side of endoplasmic reticulum membrane" evidence=IDA]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161559 EMBL:AL035394 GO:GO:0071458 PANTHER:PTHR10994
GO:GO:0071786 EMBL:AY050321 EMBL:AY133635 EMBL:AY087881
IPI:IPI00517163 PIR:T05595 RefSeq:NP_194094.1 UniGene:At.25485
ProteinModelPortal:Q9SUR3 SMR:Q9SUR3 STRING:Q9SUR3 PaxDb:Q9SUR3
PRIDE:Q9SUR3 EnsemblPlants:AT4G23630.1 GeneID:828463
KEGG:ath:AT4G23630 TAIR:At4g23630 eggNOG:NOG242905
HOGENOM:HOG000237479 InParanoid:Q9SUR3 OMA:EIGHGRD PhylomeDB:Q9SUR3
ProtClustDB:CLSN2685988 Genevestigator:Q9SUR3 GO:GO:0071782
Uniprot:Q9SUR3
Length = 275
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 66/208 (31%), Positives = 113/208 (54%)
Query: 1 MGSSSDRLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTXXXX 60
M S RLF R++ +H++LGGG AD+ +W+ K ++ G+L AAWVVFE Y
Sbjct: 66 MKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTL 125
Query: 61 XXXXXXXXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDM 120
N+ P +PE+H+ EE + ++A+ +R +N S +++
Sbjct: 126 LCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREI 185
Query: 121 ALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILG 180
A G++ + F LW++S +GG +FLTL Y +LV++ T+P Y++YED +D
Sbjct: 186 ASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKA 245
Query: 181 YRKLRQLYVKIDEEFVSKVRKWILEKQK 208
+L++ Y +DE+ +SK+ L+ +K
Sbjct: 246 MIELKKQYAVLDEKVLSKIPLGPLKNKK 273
>TAIR|locus:2049077 [details] [associations]
symbol:AT2G15280 "AT2G15280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005789 EMBL:AC007267
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:BX821446 EMBL:BT010716
EMBL:BT010986 IPI:IPI00533223 IPI:IPI00548624 PIR:A84527
RefSeq:NP_179130.2 RefSeq:NP_973467.1 UniGene:At.22376
UniGene:At.40435 ProteinModelPortal:Q6NPD8
EnsemblPlants:AT2G15280.1 GeneID:816017 KEGG:ath:AT2G15280
TAIR:At2g15280 eggNOG:NOG300173 InParanoid:Q6NPD8 OMA:VAREIYV
PhylomeDB:Q6NPD8 ProtClustDB:CLSN2690715 Genevestigator:Q6NPD8
Uniprot:Q6NPD8
Length = 201
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 68/190 (35%), Positives = 106/190 (55%)
Query: 12 QRTIHEILGGGLAADVILWRRKNVTVGILLV--TLAAWVVFERSGYTXXXXXXXXXXXXX 69
+ ++H+ + G AD+I+W KN G LL+ T W +FE+ GY+
Sbjct: 2 EESVHQSIRFGSVADLIMW--KNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSV 59
Query: 70 XXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLF 129
NRP P LP L ++EE V VA IR +N L+V++++ +G+N++
Sbjct: 60 VILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQL 119
Query: 130 FRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYV 189
FRV++ LW +SFVG +FLT+ Y +V+ L +P LYERY+D ID+ L +R ++ Y
Sbjct: 120 FRVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYR 179
Query: 190 KIDEEFVSKV 199
KIDE + K+
Sbjct: 180 KIDERLLQKI 189
>TAIR|locus:2128238 [details] [associations]
symbol:BTI2 "VIRB2-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0071458
"integral to cytosolic side of endoplasmic reticulum membrane"
evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IMP] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0010286 "heat acclimation" evidence=RCA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005886
GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL096882
EMBL:AL161531 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 ProtClustDB:CLSN2685988
GO:GO:0071782 EMBL:AY034901 EMBL:AY048273 EMBL:AY057606
EMBL:BT002368 EMBL:AY086294 IPI:IPI00525362 PIR:T13013
RefSeq:NP_192861.1 UniGene:At.3649 ProteinModelPortal:Q9SUT9
SMR:Q9SUT9 IntAct:Q9SUT9 STRING:Q9SUT9 PaxDb:Q9SUT9 PRIDE:Q9SUT9
EnsemblPlants:AT4G11220.1 GeneID:826724 KEGG:ath:AT4G11220
TAIR:At4g11220 InParanoid:Q9SUT9 OMA:FANLRQI PhylomeDB:Q9SUT9
Genevestigator:Q9SUT9 Uniprot:Q9SUT9
Length = 271
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 61/202 (30%), Positives = 109/202 (53%)
Query: 7 RLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXX 66
RLF R+R +H++LGGG AD+ +W+ K ++ G+ AWV+FE Y
Sbjct: 68 RLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMI 127
Query: 67 XXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNS 126
++ P +PE+H+ EE + ++A+ +R +N +S +++A G++
Sbjct: 128 VALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDI 187
Query: 127 RLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQ 186
+ F LW++S +GG FLTL Y +LV++ T+P Y++YED +D Y +L++
Sbjct: 188 KKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKK 247
Query: 187 LYVKIDEEFVSKVRKWILEKQK 208
Y +D + SK+ + L+ +K
Sbjct: 248 QYAVLDAKVFSKIPRGPLKDKK 269
>TAIR|locus:2089663 [details] [associations]
symbol:AT3G18260 "AT3G18260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005789
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:AP000414 EMBL:BT024845
EMBL:AY087239 IPI:IPI00546437 RefSeq:NP_566604.1 UniGene:At.38585
ProteinModelPortal:Q9LJQ5 PRIDE:Q9LJQ5 EnsemblPlants:AT3G18260.1
GeneID:821354 KEGG:ath:AT3G18260 TAIR:At3g18260 eggNOG:NOG309784
InParanoid:Q9LJQ5 OMA:CSFTTLL PhylomeDB:Q9LJQ5
ProtClustDB:CLSN2688524 Genevestigator:Q9LJQ5 Uniprot:Q9LJQ5
Length = 225
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 60/204 (29%), Positives = 99/204 (48%)
Query: 7 RLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXX 66
+LF RQR+IH I GGG AD++LWR + +++ W + E Y
Sbjct: 22 KLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASM 81
Query: 67 XXXXXXXXXXXXXXXXNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNS 126
N P +PE+ L E ++A R N L+ D+A G++
Sbjct: 82 TSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDP 141
Query: 127 RLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQ 186
LFF + L+++S +G +F+ L + V + TLP +YE YED +D A RK+++
Sbjct: 142 PLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKK 201
Query: 187 LYVKIDEEFVSKVRKWILEKQKLS 210
LY K+D +SK+ + ++ +K +
Sbjct: 202 LYKKVDTNVLSKIPRGTVKNKKFT 225
>TAIR|locus:2090609 [details] [associations]
symbol:AT3G19460 "AT3G19460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005783 EMBL:CP002686 EMBL:AB025624
PANTHER:PTHR10994 HOGENOM:HOG000237479 IPI:IPI00846973
RefSeq:NP_001078186.1 UniGene:At.38403 ProteinModelPortal:A8MR23
PRIDE:A8MR23 EnsemblPlants:AT3G19460.2 GeneID:821480
KEGG:ath:AT3G19460 OMA:RHINTIV ProtClustDB:CLSN2688563
Genevestigator:A8MR23 Uniprot:A8MR23
Length = 218
Score = 157 (60.3 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 32/114 (28%), Positives = 53/114 (46%)
Query: 25 ADVILWRRKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXXNR 84
AD++LWR + V +L+ + W +FER+GY NR
Sbjct: 7 ADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNR 66
Query: 85 PAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALY-LW 137
P PP+P + + EE N+ A +R +N LS++ D+ + +N +V + LW
Sbjct: 67 PLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLW 120
Score = 122 (48.0 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
Identities = 22/45 (48%), Positives = 34/45 (75%)
Query: 131 RVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDK 175
+V+L LW IS+VG L + LTL Y +++ L+ P +YE+Y+DHID+
Sbjct: 147 QVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDE 191
>TAIR|locus:2082772 [details] [associations]
symbol:AT3G61560 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0005886 GO:GO:0009506 EMBL:CP002686 PANTHER:PTHR10994
IPI:IPI00540028 RefSeq:NP_001030913.1 UniGene:At.34268 PRIDE:F4JFD4
EnsemblPlants:AT3G61560.2 GeneID:825329 KEGG:ath:AT3G61560
Uniprot:F4JFD4
Length = 264
Score = 137 (53.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 7 RLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGY 55
RLF R++ +H++LGGGL ADV LWR K ++ +L V A WV+FE Y
Sbjct: 51 RLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEY 99
Score = 88 (36.0 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 26/108 (24%), Positives = 56/108 (51%)
Query: 93 HLSEEMVNEVA-ALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTL 151
H + + E++ LI++ F S+ M + ++ ++ W + +G + L
Sbjct: 152 HCLRKGLEEISHELIQSTYETF-SI---MGFVTRTSIYIGISGGFWAVDNLG-CGKLVQL 206
Query: 152 GYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKV 199
+ V++ T+P LYE++ED +D A ++L++ Y+ DE+ +SK+
Sbjct: 207 LDSCFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKL 254
>TAIR|locus:2046783 [details] [associations]
symbol:RTNLB13 "AT2G23640" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0071458 "integral to cytosolic side of
endoplasmic reticulum membrane" evidence=IDA] [GO:0071782
"endoplasmic reticulum tubular network" evidence=IDA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=IMP]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 EMBL:AC003040
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004482 GO:GO:0071458
PANTHER:PTHR10994 GO:GO:0071786 GO:GO:0071782 EMBL:BX822075
IPI:IPI00527827 PIR:T01153 RefSeq:NP_565555.1 UniGene:At.50091
ProteinModelPortal:O64837 STRING:O64837 PaxDb:O64837 PRIDE:O64837
EnsemblPlants:AT2G23640.1 GeneID:816896 KEGG:ath:AT2G23640
TAIR:At2g23640 eggNOG:NOG307342 HOGENOM:HOG000154223
InParanoid:O64837 OMA:WMFRVGA PhylomeDB:O64837
ProtClustDB:CLSN2688372 Genevestigator:O64837 Uniprot:O64837
Length = 206
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 45/156 (28%), Positives = 68/156 (43%)
Query: 23 LAADVILWRRKNVTVGILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXXXX 82
+ D+ LWRRK + LLV+ + W++ G+T
Sbjct: 15 IVEDIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLL 74
Query: 83 NRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSR--LFFRVALYLWLIS 140
++ P L L +SEE V E R + + V +G S +F R L W++S
Sbjct: 75 SKVEPELSGLEVSEEFVVETVRSCRMLMEEM--VRWMFRVGAESEWFVFARTVLGFWILS 132
Query: 141 FVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKY 176
+G L DF T + LV+ LT+P L+E Y D I K+
Sbjct: 133 RIGNLLDFHTCLFIGLVMGLTVPKLWEEYGDQIQKH 168
>UNIPROTKB|F1P5B2 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00594028 Ensembl:ENSGALT00000040233 ArrayExpress:F1P5B2
Uniprot:F1P5B2
Length = 344
Score = 136 (52.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 42/208 (20%), Positives = 87/208 (41%)
Query: 2 GSSSDRLFKRQRTIHEILGGGLAADVILWR---RKNVTVG---ILLVTLAAWVVFERSGY 55
GS+ + LF T ++ D++ WR + V G LL++L + + + Y
Sbjct: 135 GSADETLFALPATSEPLMHSSAVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAY 194
Query: 56 TXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPE--LHLSEEMVNEVAALIRTRVNDF 113
P E + +SEE++ + ++++ +N
Sbjct: 195 IALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGT 254
Query: 114 LSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHI 173
+ + + L + + A+ +W+ ++VG L + LTL +L+ + ++P +YER++ I
Sbjct: 255 VKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQI 314
Query: 174 DKYAILGYRKLRQLYVKIDEEFVSKVRK 201
D Y L + ++ KI + RK
Sbjct: 315 DHYLGLVNKNVKDAMAKIQAKIPGLKRK 342
>UNIPROTKB|E1BUW7 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00821143 Ensembl:ENSGALT00000040236 ArrayExpress:E1BUW7
Uniprot:E1BUW7
Length = 347
Score = 130 (50.8 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 43/210 (20%), Positives = 88/210 (41%)
Query: 2 GSSSDRLFKRQRTIHEIL--GGGLAADVILWR---RKNVTVG---ILLVTLAAWVVFERS 53
GS+ + LF T ++ G D++ WR + V G LL++L + + +
Sbjct: 136 GSADETLFALPATSEPLMHSSAGNIVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVT 195
Query: 54 GYTXXXXXXXXXXXXXXXXXXXXXXXXXXNRPAPPLPE--LHLSEEMVNEVAALIRTRVN 111
Y P E + +SEE++ + ++++ +N
Sbjct: 196 AYIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHIN 255
Query: 112 DFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYED 171
+ + + L + + A+ +W+ ++VG L + LTL +L+ + ++P +YER++
Sbjct: 256 GTVKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQA 315
Query: 172 HIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
ID Y L + ++ KI + RK
Sbjct: 316 QIDHYLGLVNKNVKDAMAKIQAKIPGLKRK 345
>UNIPROTKB|F1NH22 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02003912
EMBL:AADN02003911 IPI:IPI00583109 Ensembl:ENSGALT00000019594
ArrayExpress:F1NH22 Uniprot:F1NH22
Length = 208
Score = 126 (49.4 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 29/111 (26%), Positives = 60/111 (54%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E++LS++ + + ++ VN + + + L ++ + A+ +WL+++VG L + LT
Sbjct: 96 EMNLSQDQIQKYTDCLQLYVNSTVKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 155
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L ++V + TLP +Y++Y+ ID+Y L + + KI + RK
Sbjct: 156 LLIMAVVSMFTLPVVYDKYQAQIDQYLGLVRTHINTVVAKIQAKIPGAKRK 206
>UNIPROTKB|F1Q2B3 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03005762
Ensembl:ENSCAFT00000039479 Uniprot:F1Q2B3
Length = 715
Score = 130 (50.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 44/189 (23%), Positives = 80/189 (42%)
Query: 24 AADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXX 77
A D++ WR + + G +LL +L + V Y
Sbjct: 522 AIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 581
Query: 78 XXXXXNRPAPPLPELH--LSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALY 135
P EL LS+E + + ++ VN+ L + + L ++ + A+
Sbjct: 582 QKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 641
Query: 136 LWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEF 195
+WL+++VG L + LTL ++V + TLP +Y +++ ID+Y L + + K D +
Sbjct: 642 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINTVVAKSDLQH 701
Query: 196 VSKVRKWIL 204
SK R + L
Sbjct: 702 TSKCRNYHL 710
>ZFIN|ZDB-GENE-030710-3 [details] [associations]
symbol:rtn1b "reticulon 1b" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-3 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG008971 HOGENOM:HOG000134444 EMBL:AY555034
IPI:IPI00650731 UniGene:Dr.673 ProteinModelPortal:Q4G5W7 SMR:Q4G5W7
PRIDE:Q4G5W7 InParanoid:Q4G5W7 ArrayExpress:Q4G5W7 Bgee:Q4G5W7
Uniprot:Q4G5W7
Length = 767
Score = 128 (50.1 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 30/111 (27%), Positives = 60/111 (54%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ LS + + + A ++ +N L + + L ++ + A+ +WL+++VG L + LT
Sbjct: 655 EMSLSHDQMQKYAENVQYYINSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 714
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L +V + ++P +YE+Y+ ID+Y L ++ + KI E+ RK
Sbjct: 715 LLIMVVVCMFSMPVVYEKYQAQIDQYVDLIRTQVNSVVAKIQEKVPGTKRK 765
>UNIPROTKB|F1NCK0 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00820463 Ensembl:ENSGALT00000013195 ArrayExpress:F1NCK0
Uniprot:F1NCK0
Length = 199
Score = 118 (46.6 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 26/111 (23%), Positives = 60/111 (54%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
++ +SEE++ + ++++ +N + + + L + + A+ +W+ ++VG L + LT
Sbjct: 87 DVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLT 146
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L +L+ + ++P +YER++ ID Y L + ++ KI + RK
Sbjct: 147 LLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAKIQAKIPGLKRK 197
>UNIPROTKB|F1NH23 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0030182 "neuron differentiation" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 OMA:PFLNKQK GeneTree:ENSGT00390000009934
EMBL:AADN02003912 EMBL:AADN02003911 IPI:IPI00586633
Ensembl:ENSGALT00000019593 ArrayExpress:F1NH23 Uniprot:F1NH23
Length = 760
Score = 126 (49.4 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 29/111 (26%), Positives = 60/111 (54%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E++LS++ + + ++ VN + + + L ++ + A+ +WL+++VG L + LT
Sbjct: 648 EMNLSQDQIQKYTDCLQLYVNSTVKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 707
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L ++V + TLP +Y++Y+ ID+Y L + + KI + RK
Sbjct: 708 LLIMAVVSMFTLPVVYDKYQAQIDQYLGLVRTHINTVVAKIQAKIPGAKRK 758
>UNIPROTKB|Q6IFY7 [details] [associations]
symbol:rtn1-a "Reticulon-1-A" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994 EMBL:AY182251
EMBL:CD360654 EMBL:BK004007 RefSeq:NP_001089006.1 UniGene:Xl.24060
ProteinModelPortal:Q6IFY7 SMR:Q6IFY7 GeneID:496390 KEGG:xla:496390
CTD:496390 Xenbase:XB-GENE-6252069 HOVERGEN:HBG000838
Uniprot:Q6IFY7
Length = 207
Score = 118 (46.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 27/111 (24%), Positives = 57/111 (51%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ LS+E + + ++ N + + L ++ + A+ +WL+++VG L + LT
Sbjct: 96 EISLSQEQIQKYTDCLQVYTNSIAKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 155
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L ++V + +LP +Y++Y+ ID+Y L + + KI + +K
Sbjct: 156 LLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMNTIMTKIQAKIPGTKQK 206
>UNIPROTKB|F1P5B1 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00823248 Ensembl:ENSGALT00000040235 ArrayExpress:F1P5B1
Uniprot:F1P5B1
Length = 326
Score = 121 (47.7 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 38/189 (20%), Positives = 79/189 (41%)
Query: 21 GGLAADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXX 74
G D++ WR + V G LL++L + + + Y
Sbjct: 136 GSAVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 195
Query: 75 XXXXXXXXNRPAPPLPE--LHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRV 132
P E + +SEE++ + ++++ +N + + + L + +
Sbjct: 196 QAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKF 255
Query: 133 ALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKID 192
A+ +W+ ++VG L + LTL +L+ + ++P +YER++ ID Y L + ++ KI
Sbjct: 256 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAKIQ 315
Query: 193 EEFVSKVRK 201
+ RK
Sbjct: 316 AKIPGLKRK 324
>UNIPROTKB|F8W914 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 IPI:IPI01011809
ProteinModelPortal:F8W914 SMR:F8W914 Ensembl:ENST00000402434
ArrayExpress:F8W914 Bgee:F8W914 Uniprot:F8W914
Length = 345
Score = 121 (47.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 41/189 (21%), Positives = 78/189 (41%)
Query: 21 GGLAADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXX 74
G + D++ WR + V G LL++L + + + Y
Sbjct: 155 GSVVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 214
Query: 75 XXXXXXXXNRP--APPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRV 132
P A E+ +SEE+V + + VN + + + L + +
Sbjct: 215 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKF 274
Query: 133 ALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKID 192
A+ +W+ ++VG L + LTL +L+ + ++P +YER++ ID Y L + ++ KI
Sbjct: 275 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQ 334
Query: 193 EEFVSKVRK 201
+ RK
Sbjct: 335 AKIPGLKRK 343
>UNIPROTKB|Q7YRW9 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 EMBL:DAAA02030906 EMBL:DAAA02030907
UniGene:Bt.105155 GeneID:359718 KEGG:bta:359718 NextBio:20812748
EMBL:BC116111 EMBL:AY164744 IPI:IPI00718559 RefSeq:NP_001068606.1
SMR:Q7YRW9 STRING:Q7YRW9 Ensembl:ENSBTAT00000014744 Uniprot:Q7YRW9
Length = 199
Score = 116 (45.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 29/111 (26%), Positives = 57/111 (51%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ +SEE+V + + VN + + + L + + A+ +W+ ++VG L + LT
Sbjct: 87 EVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLT 146
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L +L+ + ++P +YER++ ID Y L + ++ KI + RK
Sbjct: 147 LLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKIPGLKRK 197
>UNIPROTKB|Q6IM70 [details] [associations]
symbol:RTN4 "RTN4-C" species:9823 "Sus scrofa" [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG000838 eggNOG:NOG306139 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 OMA:NWKCQAI EMBL:CU929931
EMBL:CU928339 EMBL:BK001795 RefSeq:NP_001123435.1 UniGene:Ssc.94392
SMR:Q6IM70 STRING:Q6IM70 Ensembl:ENSSSCT00000009205
GeneID:100170118 KEGG:ssc:100170118 Uniprot:Q6IM70
Length = 199
Score = 116 (45.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 29/111 (26%), Positives = 57/111 (51%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ +SEE+V + + VN + + + L + + A+ +W+ ++VG L + LT
Sbjct: 87 EVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLT 146
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L +L+ + ++P +YER++ ID Y L + ++ KI + RK
Sbjct: 147 LLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKIPGLKRK 197
>UNIPROTKB|Q1RMR8 [details] [associations]
symbol:RTN4 "RTN4 protein" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 EMBL:DAAA02030906 EMBL:DAAA02030907
EMBL:BC114748 IPI:IPI00730691 RefSeq:NP_001106692.1
UniGene:Bt.105155 SMR:Q1RMR8 STRING:Q1RMR8
Ensembl:ENSBTAT00000036144 GeneID:359718 KEGG:bta:359718
NextBio:20812748 Uniprot:Q1RMR8
Length = 379
Score = 121 (47.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 41/189 (21%), Positives = 78/189 (41%)
Query: 21 GGLAADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXX 74
G + D++ WR + V G LL++L + + + Y
Sbjct: 189 GSVVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 248
Query: 75 XXXXXXXXNRP--APPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRV 132
P A E+ +SEE+V + + VN + + + L + +
Sbjct: 249 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKF 308
Query: 133 ALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKID 192
A+ +W+ ++VG L + LTL +L+ + ++P +YER++ ID Y L + ++ KI
Sbjct: 309 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQ 368
Query: 193 EEFVSKVRK 201
+ RK
Sbjct: 369 AKIPGLKRK 377
>UNIPROTKB|Q1LZ76 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:DAAA02029288
EMBL:DAAA02029289 EMBL:BC116162 IPI:IPI00904153 UniGene:Bt.22982
SMR:Q1LZ76 STRING:Q1LZ76 Ensembl:ENSBTAT00000015218
NextBio:20875732 Uniprot:Q1LZ76
Length = 208
Score = 116 (45.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 40/176 (22%), Positives = 74/176 (42%)
Query: 24 AADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXX 77
A D++ WR + + G +LL +L + V Y
Sbjct: 21 AIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 80
Query: 78 XXXXXNRPAPPLPELH--LSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALY 135
P EL LS+E + + ++ VN+ L + + L ++ + A+
Sbjct: 81 QKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 140
Query: 136 LWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
+WL+++VG L + LTL ++V + TLP +Y +++ ID+Y L + + KI
Sbjct: 141 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKI 196
>UNIPROTKB|F1PNX5 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:DPKKSGI
EMBL:AAEX03005762 Ensembl:ENSCAFT00000024693 Uniprot:F1PNX5
Length = 208
Score = 116 (45.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 40/176 (22%), Positives = 74/176 (42%)
Query: 24 AADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXX 77
A D++ WR + + G +LL +L + V Y
Sbjct: 21 AIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 80
Query: 78 XXXXXNRPAPPLPELH--LSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALY 135
P EL LS+E + + ++ VN+ L + + L ++ + A+
Sbjct: 81 QKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 140
Query: 136 LWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
+WL+++VG L + LTL ++V + TLP +Y +++ ID+Y L + + KI
Sbjct: 141 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINTVVAKI 196
>UNIPROTKB|A8MT72 [details] [associations]
symbol:RTN1 "Reticulon-1" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 HGNC:HGNC:10467 ChiTaRS:RTN1
HOGENOM:HOG000015254 EMBL:AL121694 EMBL:AL133299 EMBL:AL139194
IPI:IPI00794113 ProteinModelPortal:A8MT72 SMR:A8MT72 STRING:A8MT72
PRIDE:A8MT72 Ensembl:ENST00000395090 UCSC:uc010apl.2
ArrayExpress:A8MT72 Bgee:A8MT72 Uniprot:A8MT72
Length = 193
Score = 115 (45.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 40/176 (22%), Positives = 73/176 (41%)
Query: 24 AADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXX 77
A D++ WR + + G +LL +L + V Y
Sbjct: 6 AIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 65
Query: 78 XXXXXNRPAPPLPELH--LSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALY 135
P EL LS+E + + ++ VN L + + L ++ + A+
Sbjct: 66 QKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVL 125
Query: 136 LWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
+WL+++VG L + LTL ++V + TLP +Y +++ ID+Y L + + KI
Sbjct: 126 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKI 181
>UNIPROTKB|G3X7U3 [details] [associations]
symbol:LOC100847649 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:DAAA02063501
Ensembl:ENSBTAT00000046142 Uniprot:G3X7U3
Length = 74
Score = 102 (41.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 18/71 (25%), Positives = 43/71 (60%)
Query: 131 RVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVK 190
++A+++WL+++VG + + +TL + ++V ++P +YE+Y+ ID Y + + + + K
Sbjct: 1 QLAVFMWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIARDQTKSIVEK 60
Query: 191 IDEEFVSKVRK 201
I + +K
Sbjct: 61 IQAKLPGIAKK 71
>UNIPROTKB|I3LBH0 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 CTD:6252 GeneTree:ENSGT00390000009934
EMBL:CU469078 EMBL:FP340567 UniGene:Ssc.13916 GeneID:100152394
KEGG:ssc:100152394 RefSeq:NP_001231570.1 RefSeq:XP_003480527.1
ProteinModelPortal:I3LBH0 SMR:I3LBH0 Ensembl:ENSSSCT00000032115
Uniprot:I3LBH0
Length = 208
Score = 115 (45.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 40/176 (22%), Positives = 73/176 (41%)
Query: 24 AADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXX 77
A D++ WR + + G +LL +L + V Y
Sbjct: 21 AIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 80
Query: 78 XXXXXNRPAPPLPELH--LSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALY 135
P EL LS+E + + ++ VN L + + L ++ + A+
Sbjct: 81 QKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVL 140
Query: 136 LWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
+WL+++VG L + LTL ++V + TLP +Y +++ ID+Y L + + KI
Sbjct: 141 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKI 196
>UNIPROTKB|D4AEM9 [details] [associations]
symbol:Rtn4 "Reticulon-4" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 RGD:620989
GO:GO:0005783 PANTHER:PTHR10994 IPI:IPI00568363
Ensembl:ENSRNOT00000051817 ArrayExpress:D4AEM9 Uniprot:D4AEM9
Length = 1045
Score = 123 (48.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 44/204 (21%), Positives = 84/204 (41%)
Query: 10 KRQRTIHEILGGGLA----ADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXX 59
K R++ +L L+ D++ WR + V G LL++L + + + Y
Sbjct: 840 KEDRSLSAVLSAELSKTSVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALA 899
Query: 60 XXXXXXXXXXXXXXXXXXXXXXXNRP--APPLPELHLSEEMVNEVAALIRTRVNDFLSVS 117
P A E+ +SEE+V + + VN +
Sbjct: 900 LLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKEL 959
Query: 118 QDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYA 177
+ + L + + A+ +W+ ++VG L + LTL +L+ + ++P +YER++ ID Y
Sbjct: 960 RRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYL 1019
Query: 178 ILGYRKLRQLYVKIDEEFVSKVRK 201
L + ++ KI + RK
Sbjct: 1020 GLANKSVKDAMAKIQAKIPGLKRK 1043
>RGD|620989 [details] [associations]
symbol:Rtn4 "reticulon 4" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0007413 "axonal fasciculation" evidence=ISO;IDA]
[GO:0007568 "aging" evidence=IEP] [GO:0010977 "negative regulation
of neuron projection development" evidence=IDA] [GO:0014823
"response to activity" evidence=IEP] [GO:0016021 "integral to
membrane" evidence=TAS] [GO:0021553 "olfactory nerve development"
evidence=IEP] [GO:0021801 "cerebral cortex radial glia guided
migration" evidence=ISO;ISS] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=ISO;IDA] [GO:0030308 "negative
regulation of cell growth" evidence=ISO] [GO:0030334 "regulation of
cell migration" evidence=ISO] [GO:0030517 "negative regulation of
axon extension" evidence=ISO;ISS;IDA] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0033603 "positive regulation of dopamine
secretion" evidence=IMP] [GO:0042995 "cell projection"
evidence=ISO] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=ISO;IDA] [GO:0043209
"myelin sheath" evidence=IDA] [GO:0043234 "protein complex"
evidence=IDA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IDA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IDA] [GO:0048679 "regulation
of axon regeneration" evidence=IDA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEP] [GO:0050771 "negative regulation of
axonogenesis" evidence=IDA;IMP] [GO:0051930 "regulation of sensory
perception of pain" evidence=IDA] [GO:0051960 "regulation of
nervous system development" evidence=ISO] [GO:0060317 "cardiac
epithelial to mesenchymal transition" evidence=ISO] [GO:0070571
"negative regulation of neuron projection regeneration"
evidence=IMP] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=ISO] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=ISO;IDA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 RGD:620989 GO:GO:0005886 GO:GO:0005635
GO:GO:0043234 GO:GO:0032403 GO:GO:0014823 GO:GO:0007568
GO:GO:0051930 GO:GO:0043025 GO:GO:0033603 GO:GO:0045665
GO:GO:0043005 GO:GO:0001525 GO:GO:0030334 GO:GO:0030176
GO:GO:0060317 GO:GO:0007413 GO:GO:0048709 GO:GO:0043209
GO:GO:0030517 GO:GO:0021553 GO:GO:0045687 GO:GO:0021801
PANTHER:PTHR10994 GO:GO:0071786 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 CTD:57142 HOVERGEN:HBG023134
GO:GO:0070571 GO:GO:0048679 GO:GO:2000172 OrthoDB:EOG4XH010
EMBL:AF051335 EMBL:AJ242961 EMBL:AJ242962 EMBL:AJ242963
EMBL:AF132045 EMBL:AF132046 IPI:IPI00230986 IPI:IPI00230987
IPI:IPI00231765 IPI:IPI00778998 RefSeq:NP_114019.1 UniGene:Rn.1348
UniGene:Rn.163269 ProteinModelPortal:Q9JK11 SMR:Q9JK11
IntAct:Q9JK11 STRING:Q9JK11 PhosphoSite:Q9JK11 PRIDE:Q9JK11
Ensembl:ENSRNOT00000006957 Ensembl:ENSRNOT00000042965
Ensembl:ENSRNOT00000056823 GeneID:83765 KEGG:rno:83765
UCSC:RGD:620989 HOGENOM:HOG000148576 InParanoid:Q9JK11
NextBio:616333 ArrayExpress:Q9JK11 Genevestigator:Q9JK11
GermOnline:ENSRNOG00000004621 Uniprot:Q9JK11
Length = 1163
Score = 123 (48.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 44/204 (21%), Positives = 84/204 (41%)
Query: 10 KRQRTIHEILGGGLA----ADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXX 59
K R++ +L L+ D++ WR + V G LL++L + + + Y
Sbjct: 958 KEDRSLSAVLSAELSKTSVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALA 1017
Query: 60 XXXXXXXXXXXXXXXXXXXXXXXNRP--APPLPELHLSEEMVNEVAALIRTRVNDFLSVS 117
P A E+ +SEE+V + + VN +
Sbjct: 1018 LLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKEL 1077
Query: 118 QDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYA 177
+ + L + + A+ +W+ ++VG L + LTL +L+ + ++P +YER++ ID Y
Sbjct: 1078 RRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYL 1137
Query: 178 ILGYRKLRQLYVKIDEEFVSKVRK 201
L + ++ KI + RK
Sbjct: 1138 GLANKSVKDAMAKIQAKIPGLKRK 1161
>UNIPROTKB|F1LQN3 [details] [associations]
symbol:Rtn4 "Reticulon-4" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0005635 "nuclear
envelope" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0021801 "cerebral cortex radial glia guided migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0060317 "cardiac
epithelial to mesenchymal transition" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=IEA]
[GO:2000172 "regulation of branching morphogenesis of a nerve"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620989 GO:GO:0005783 GO:GO:0005635 GO:GO:0030308 GO:GO:0043025
GO:GO:0001525 GO:GO:0030334 GO:GO:0042995 GO:GO:0060317
GO:GO:0007413 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 GO:GO:2000172 IPI:IPI00231765
PRIDE:F1LQN3 Ensembl:ENSRNOT00000006443 ArrayExpress:F1LQN3
Uniprot:F1LQN3
Length = 1163
Score = 123 (48.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 44/204 (21%), Positives = 84/204 (41%)
Query: 10 KRQRTIHEILGGGLA----ADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXX 59
K R++ +L L+ D++ WR + V G LL++L + + + Y
Sbjct: 958 KEDRSLSAVLSAELSKTSVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALA 1017
Query: 60 XXXXXXXXXXXXXXXXXXXXXXXNRP--APPLPELHLSEEMVNEVAALIRTRVNDFLSVS 117
P A E+ +SEE+V + + VN +
Sbjct: 1018 LLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKEL 1077
Query: 118 QDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYA 177
+ + L + + A+ +W+ ++VG L + LTL +L+ + ++P +YER++ ID Y
Sbjct: 1078 RRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYL 1137
Query: 178 ILGYRKLRQLYVKIDEEFVSKVRK 201
L + ++ KI + RK
Sbjct: 1138 GLANKSVKDAMAKIQAKIPGLKRK 1161
>MGI|MGI:1915835 [details] [associations]
symbol:Rtn4 "reticulon 4" species:10090 "Mus musculus"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0007399 "nervous system development"
evidence=IDA] [GO:0007413 "axonal fasciculation" evidence=ISO;IMP]
[GO:0010977 "negative regulation of neuron projection development"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0021801 "cerebral cortex
radial glia guided migration" evidence=IMP] [GO:0030176 "integral
to endoplasmic reticulum membrane" evidence=ISO;ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISO] [GO:0030334
"regulation of cell migration" evidence=ISO] [GO:0030517 "negative
regulation of axon extension" evidence=ISO;ISS;IMP] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0033603 "positive
regulation of dopamine secretion" evidence=ISO] [GO:0042995 "cell
projection" evidence=IDA] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO;IDA]
[GO:0043209 "myelin sheath" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISO] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=ISO] [GO:0048679 "regulation
of axon regeneration" evidence=ISO] [GO:0050771 "negative
regulation of axonogenesis" evidence=ISO] [GO:0051930 "regulation
of sensory perception of pain" evidence=ISO] [GO:0051960
"regulation of nervous system development" evidence=IMP]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IMP] [GO:0070571 "negative regulation of neuron projection
regeneration" evidence=ISO] [GO:0071786 "endoplasmic reticulum
tubular network organization" evidence=ISO] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=ISO;IMP]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1915835
GO:GO:0005886 GO:GO:0005635 GO:GO:0043234 GO:GO:0014823
GO:GO:0007568 GO:GO:0051930 GO:GO:0043025 GO:GO:0033603
GO:GO:0045665 GO:GO:0043005 GO:GO:0001525 GO:GO:0030334
GO:GO:0030176 GO:GO:0042995 GO:GO:0060317 GO:GO:0007413
GO:GO:0048709 GO:GO:0043209 GO:GO:0030517 GO:GO:0021553
EMBL:AL929371 UniGene:Mm.445271 GO:GO:0045687 GO:GO:0021801
PANTHER:PTHR10994 GO:GO:0071786 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 CTD:57142 HOVERGEN:HBG023134
ChiTaRS:RTN4 GO:GO:0070571 GO:GO:0048679 GO:GO:2000172
EMBL:AY102280 EMBL:AY102284 EMBL:AY102286 EMBL:AF326337
EMBL:AY114152 EMBL:AK220511 EMBL:BC032192 EMBL:BC056373
EMBL:AB073672 EMBL:AK003859 IPI:IPI00120415 IPI:IPI00270767
IPI:IPI00469392 RefSeq:NP_077188.1 RefSeq:NP_918940.1
RefSeq:NP_918943.1 UniGene:Mm.192580 UniGene:Mm.440639
UniGene:Mm.488364 PDB:2KO2 PDBsum:2KO2 ProteinModelPortal:Q99P72
SMR:Q99P72 IntAct:Q99P72 MINT:MINT-188330 STRING:Q99P72
PhosphoSite:Q99P72 PaxDb:Q99P72 PRIDE:Q99P72
Ensembl:ENSMUST00000060992 Ensembl:ENSMUST00000102841
Ensembl:ENSMUST00000102843 GeneID:68585 KEGG:mmu:68585
UCSC:uc007ihk.2 UCSC:uc007ihn.2 InParanoid:Q99P72 OMA:HTSENKT
OrthoDB:EOG4XH010 EvolutionaryTrace:Q99P72 NextBio:327502
Bgee:Q99P72 CleanEx:MM_RTN4 Genevestigator:Q99P72
GermOnline:ENSMUSG00000020458 Uniprot:Q99P72
Length = 1162
Score = 122 (48.0 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 44/204 (21%), Positives = 83/204 (40%)
Query: 10 KRQRTIHEILGGGL----AADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXX 59
K R++ +L L D++ WR + V G LL++L + + + Y
Sbjct: 957 KEDRSLTAVLSAELNKTSVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALA 1016
Query: 60 XXXXXXXXXXXXXXXXXXXXXXXNRP--APPLPELHLSEEMVNEVAALIRTRVNDFLSVS 117
P A E+ +SEE+V + + VN +
Sbjct: 1017 LLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKEL 1076
Query: 118 QDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYA 177
+ + L + + A+ +W+ ++VG L + LTL +L+ + ++P +YER++ ID Y
Sbjct: 1077 RRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQAQIDHYL 1136
Query: 178 ILGYRKLRQLYVKIDEEFVSKVRK 201
L + ++ KI + RK
Sbjct: 1137 GLANKSVKDAMAKIQAKIPGLKRK 1160
>UNIPROTKB|A7MC64 [details] [associations]
symbol:rtn1 "Reticulon-1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0016021 GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994
HOVERGEN:HBG008971 CTD:6252 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:BC118846
EMBL:BC152060 EMBL:AL635298 EMBL:BK004008 RefSeq:NP_001078819.2
UniGene:Str.40113 ProteinModelPortal:A7MC64 SMR:A7MC64
STRING:A7MC64 Ensembl:ENSXETT00000037003 GeneID:677736
KEGG:xtr:677736 Xenbase:XB-GENE-1011333 Bgee:A7MC64 Uniprot:A7MC64
Length = 764
Score = 120 (47.3 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 27/111 (24%), Positives = 58/111 (52%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ LS+E + + ++ N + + + L ++ + A+ +WL+++VG L + LT
Sbjct: 653 EISLSQEQIQKYTDCLQAYTNSIVKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 712
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L ++V + +LP +Y++Y+ ID+Y L + + KI + +K
Sbjct: 713 LLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMNTIVTKIQAKIPGTKQK 763
>UNIPROTKB|F1NNJ7 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0007413 "axonal
fasciculation" evidence=IEA] [GO:0021801 "cerebral cortex radial
glia guided migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 GO:GO:0005635
GO:GO:0030308 GO:GO:0043025 GO:GO:0030334 GO:GO:0042995
PANTHER:PTHR10994 GO:GO:0071786 GeneTree:ENSGT00390000009934
GO:GO:2000172 EMBL:AADN02044318 IPI:IPI00680876
Ensembl:ENSGALT00000031997 ArrayExpress:F1NNJ7 Uniprot:F1NNJ7
Length = 659
Score = 118 (46.6 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 26/111 (23%), Positives = 60/111 (54%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
++ +SEE++ + ++++ +N + + + L + + A+ +W+ ++VG L + LT
Sbjct: 547 DVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLT 606
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L +L+ + ++P +YER++ ID Y L + ++ KI + RK
Sbjct: 607 LLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAKIQAKIPGLKRK 657
>UNIPROTKB|F1NCP4 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0007413 "axonal
fasciculation" evidence=IEA] [GO:0021801 "cerebral cortex radial
glia guided migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 GO:GO:0005635
GO:GO:0030308 GO:GO:0043025 GO:GO:0030334 GO:GO:0042995
PANTHER:PTHR10994 GO:GO:0071786 GeneTree:ENSGT00390000009934
GO:GO:2000172 EMBL:AADN02044318 IPI:IPI00581683
Ensembl:ENSGALT00000013194 ArrayExpress:F1NCP4 Uniprot:F1NCP4
Length = 1190
Score = 118 (46.6 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 26/111 (23%), Positives = 60/111 (54%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
++ +SEE++ + ++++ +N + + + L + + A+ +W+ ++VG L + LT
Sbjct: 1078 DVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLT 1137
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L +L+ + ++P +YER++ ID Y L + ++ KI + RK
Sbjct: 1138 LLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAKIQAKIPGLKRK 1188
Score = 40 (19.1 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 84 RPAPPLPE 91
RPAPP PE
Sbjct: 120 RPAPPQPE 127
>UNIPROTKB|E1BP30 [details] [associations]
symbol:E1BP30 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0030182 PANTHER:PTHR10994 OMA:PFLNKQK
GeneTree:ENSGT00390000009934 EMBL:DAAA02029288 EMBL:DAAA02029289
IPI:IPI00924046 Ensembl:ENSBTAT00000061568 ArrayExpress:E1BP30
Uniprot:E1BP30
Length = 697
Score = 116 (45.9 bits), Expect = 0.00016, P = 0.00016
Identities = 40/176 (22%), Positives = 74/176 (42%)
Query: 24 AADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXX 77
A D++ WR + + G +LL +L + V Y
Sbjct: 510 AIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 569
Query: 78 XXXXXNRPAPPLPELH--LSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALY 135
P EL LS+E + + ++ VN+ L + + L ++ + A+
Sbjct: 570 QKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 629
Query: 136 LWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
+WL+++VG L + LTL ++V + TLP +Y +++ ID+Y L + + KI
Sbjct: 630 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKI 685
>UNIPROTKB|F1Q231 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03005762
Ensembl:ENSCAFT00000024697 Uniprot:F1Q231
Length = 704
Score = 116 (45.9 bits), Expect = 0.00016, P = 0.00016
Identities = 40/176 (22%), Positives = 74/176 (42%)
Query: 24 AADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXX 77
A D++ WR + + G +LL +L + V Y
Sbjct: 517 AIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 576
Query: 78 XXXXXNRPAPPLPELH--LSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALY 135
P EL LS+E + + ++ VN+ L + + L ++ + A+
Sbjct: 577 QKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 636
Query: 136 LWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
+WL+++VG L + LTL ++V + TLP +Y +++ ID+Y L + + KI
Sbjct: 637 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINTVVAKI 692
>UNIPROTKB|H7C106 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 ProteinModelPortal:H7C106 PRIDE:H7C106
Ensembl:ENST00000438462 OMA:NWKCQAI Uniprot:H7C106
Length = 203
Score = 108 (43.1 bits), Expect = 0.00016, P = 0.00016
Identities = 26/100 (26%), Positives = 53/100 (53%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ +SEE+V + + VN + + + L + + A+ +W+ ++VG L + LT
Sbjct: 104 EVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLT 163
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVK 190
L +L+ + ++P +YER++ ID Y L + ++ K
Sbjct: 164 LLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAK 203
>UNIPROTKB|F1N405 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000172 "regulation of branching morphogenesis of a
nerve" evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=IEA] [GO:0060317 "cardiac epithelial
to mesenchymal transition" evidence=IEA] [GO:0043025 "neuronal cell
body" evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0021801 "cerebral cortex radial glia guided migration"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 GO:GO:0005635 GO:GO:0030308 GO:GO:0043025
GO:GO:0001525 GO:GO:0030334 GO:GO:0042995 GO:GO:0060317
GO:GO:0007413 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 GO:GO:2000172 OMA:HTSENKT
EMBL:DAAA02030906 EMBL:DAAA02030907 IPI:IPI00705603
Ensembl:ENSBTAT00000014745 ArrayExpress:F1N405 Uniprot:F1N405
Length = 1202
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 41/187 (21%), Positives = 77/187 (41%)
Query: 23 LAADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXX 76
L D++ WR + V G LL++L + + + Y
Sbjct: 1014 LVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQA 1073
Query: 77 XXXXXXNRP--APPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVAL 134
P A E+ +SEE+V + + VN + + + L + + A+
Sbjct: 1074 IQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAV 1133
Query: 135 YLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEE 194
+W+ ++VG L + LTL +L+ + ++P +YER++ ID Y L + ++ KI +
Sbjct: 1134 LMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAK 1193
Query: 195 FVSKVRK 201
RK
Sbjct: 1194 IPGLKRK 1200
>UNIPROTKB|F8WAM4 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 IPI:IPI01025160
ProteinModelPortal:F8WAM4 SMR:F8WAM4 PRIDE:F8WAM4
Ensembl:ENST00000354474 ArrayExpress:F8WAM4 Bgee:F8WAM4
Uniprot:F8WAM4
Length = 960
Score = 116 (45.9 bits), Expect = 0.00024, P = 0.00024
Identities = 29/111 (26%), Positives = 57/111 (51%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ +SEE+V + + VN + + + L + + A+ +W+ ++VG L + LT
Sbjct: 848 EVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLT 907
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L +L+ + ++P +YER++ ID Y L + ++ KI + RK
Sbjct: 908 LLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKIPGLKRK 958
>UNIPROTKB|Q5MY90 [details] [associations]
symbol:rtn1-b "Reticulon-1-B" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994 EMBL:AY484582
EMBL:AF498369 EMBL:BC084108 EMBL:CD326067 EMBL:BK004058
RefSeq:NP_001089011.1 UniGene:Xl.8555 ProteinModelPortal:Q5MY90
SMR:Q5MY90 GeneID:496397 KEGG:xla:496397 CTD:496397
Xenbase:XB-GENE-1011340 HOVERGEN:HBG008971 Uniprot:Q5MY90
Length = 752
Score = 115 (45.5 bits), Expect = 0.00024, P = 0.00024
Identities = 27/111 (24%), Positives = 56/111 (50%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ LS+E + + + N + + L ++ + A+ +WL+++VG L + LT
Sbjct: 641 EISLSQEQIQKYTGCFQLYTNSIAKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 700
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L ++V + +LP +Y++Y+ ID+Y L + + KI + +K
Sbjct: 701 LLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMNIIVTKIQAKIPGTKQK 751
>FB|FBgn0053113 [details] [associations]
symbol:Rtnl1 "Reticulon-like1" species:7227 "Drosophila
melanogaster" [GO:0042048 "olfactory behavior" evidence=IMP]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0044432 "endoplasmic reticulum part"
evidence=IDA] [GO:0005790 "smooth endoplasmic reticulum"
evidence=IDA] [GO:0045169 "fusome" evidence=IDA] [GO:0002121
"inter-male aggressive behavior" evidence=IMP] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 EMBL:AE014134 GO:GO:0005811
GO:GO:0002121 GO:GO:0042048 GO:GO:0045169 GO:GO:0005790
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934
RefSeq:NP_001162875.1 UniGene:Dm.1559 ProteinModelPortal:E1JHT6
SMR:E1JHT6 EnsemblMetazoa:FBtr0301538 GeneID:33721
KEGG:dme:Dmel_CG33113 CTD:33721 FlyBase:FBgn0053113 OMA:YFANEQK
PhylomeDB:E1JHT6 GenomeRNAi:33721 NextBio:784952 Bgee:E1JHT6
GO:GO:0044432 Uniprot:E1JHT6
Length = 607
Score = 114 (45.2 bits), Expect = 0.00024, P = 0.00024
Identities = 42/173 (24%), Positives = 69/173 (39%)
Query: 27 VILWR---RKNVTVGILLVTLAA---WVVFERSGYTXXXXXXXXXXXXXXXXXXXXXXXX 80
+I WR + + G L+TLAA + V Y
Sbjct: 414 LIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRIYKSVTQAVQKT 473
Query: 81 XXNRPAPPLPELHL--SEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWL 138
P EL L S E V +A + +N F+S + + L ++ + + LW+
Sbjct: 474 NEGHPFKDYLELDLTLSHEKVQNIAGVAVAHINGFISELRRLFLVEDIIDSIKFGVILWV 533
Query: 139 ISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
++VG + +TL + V + TLP +YE + ID + L KL ++ KI
Sbjct: 534 FTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKI 586
>UNIPROTKB|I3L6J1 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0030182 PANTHER:PTHR10994 CTD:6252 OMA:PFLNKQK
GeneTree:ENSGT00390000009934 EMBL:CU469078 EMBL:FP340567
RefSeq:NP_001231569.1 RefSeq:XP_003480528.1 UniGene:Ssc.13916
Ensembl:ENSSSCT00000022854 GeneID:100152394 KEGG:ssc:100152394
Uniprot:I3L6J1
Length = 770
Score = 115 (45.5 bits), Expect = 0.00025, P = 0.00025
Identities = 40/176 (22%), Positives = 73/176 (41%)
Query: 24 AADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXX 77
A D++ WR + + G +LL +L + V Y
Sbjct: 583 AIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 642
Query: 78 XXXXXNRPAPPLPELH--LSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALY 135
P EL LS+E + + ++ VN L + + L ++ + A+
Sbjct: 643 QKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVL 702
Query: 136 LWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
+WL+++VG L + LTL ++V + TLP +Y +++ ID+Y L + + KI
Sbjct: 703 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKI 758
>UNIPROTKB|Q16799 [details] [associations]
symbol:RTN1 "Reticulon-1" species:9606 "Homo sapiens"
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0030182
"neuron differentiation" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 EMBL:CH471061 GO:GO:0030182 GO:GO:0004871
GO:GO:0030176 PANTHER:PTHR10994 HOVERGEN:HBG008971 EMBL:L10333
EMBL:L10334 EMBL:L10335 EMBL:BC090862 EMBL:BC000314 EMBL:BC003003
IPI:IPI00003971 IPI:IPI00219812 IPI:IPI00219813 PIR:A46583
PIR:I60904 RefSeq:NP_066959.1 RefSeq:NP_996734.1 UniGene:Hs.368626
ProteinModelPortal:Q16799 SMR:Q16799 IntAct:Q16799 MINT:MINT-154554
STRING:Q16799 PhosphoSite:Q16799 DMDM:12643733 PaxDb:Q16799
PRIDE:Q16799 Ensembl:ENST00000267484 Ensembl:ENST00000342503
GeneID:6252 KEGG:hsa:6252 UCSC:uc001xek.2 UCSC:uc001xem.1
UCSC:uc001xen.1 CTD:6252 GeneCards:GC14M060062 HGNC:HGNC:10467
HPA:CAB002745 MIM:600865 neXtProt:NX_Q16799 PharmGKB:PA34880
eggNOG:NOG306139 HOGENOM:HOG000134444 InParanoid:Q16799 OMA:PFLNKQK
OrthoDB:EOG437RDX PhylomeDB:Q16799 ChiTaRS:RTN1 GenomeRNAi:6252
NextBio:24277 ArrayExpress:Q16799 Bgee:Q16799 CleanEx:HS_RTN1
Genevestigator:Q16799 GermOnline:ENSG00000139970 Uniprot:Q16799
Length = 776
Score = 115 (45.5 bits), Expect = 0.00025, P = 0.00025
Identities = 40/176 (22%), Positives = 73/176 (41%)
Query: 24 AADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXX 77
A D++ WR + + G +LL +L + V Y
Sbjct: 589 AIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 648
Query: 78 XXXXXNRPAPPLPELH--LSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALY 135
P EL LS+E + + ++ VN L + + L ++ + A+
Sbjct: 649 QKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVL 708
Query: 136 LWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
+WL+++VG L + LTL ++V + TLP +Y +++ ID+Y L + + KI
Sbjct: 709 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKI 764
>RGD|620986 [details] [associations]
symbol:Rtn1 "reticulon 1" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=ISO] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 RGD:620986 GO:GO:0016021 GO:GO:0030182
GO:GO:0005789 PANTHER:PTHR10994 HOVERGEN:HBG008971 CTD:6252
eggNOG:NOG306139 OrthoDB:EOG437RDX GeneTree:ENSGT00390000009934
EMBL:U17604 EMBL:U17603 IPI:IPI00213559 IPI:IPI00231126
RefSeq:NP_446317.1 UniGene:Rn.55126 ProteinModelPortal:Q64548
SMR:Q64548 STRING:Q64548 PRIDE:Q64548 Ensembl:ENSRNOT00000006373
GeneID:116644 KEGG:rno:116644 UCSC:RGD:620986 HOGENOM:HOG000015254
NextBio:619379 Genevestigator:Q64548 Uniprot:Q64548
Length = 777
Score = 115 (45.5 bits), Expect = 0.00025, P = 0.00025
Identities = 39/176 (22%), Positives = 73/176 (41%)
Query: 24 AADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXX 77
A D++ WR + + G +LL +L + V Y
Sbjct: 590 AIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 649
Query: 78 XXXXXNRPAPPLPELH--LSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALY 135
P EL LS+E + + ++ VN L + + L ++ + A+
Sbjct: 650 QKTDEGHPFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVL 709
Query: 136 LWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
+WL+++VG L + LTL ++V + TLP +Y +++ +D+Y L + + KI
Sbjct: 710 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVAKI 765
>MGI|MGI:1933947 [details] [associations]
symbol:Rtn1 "reticulon 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1933947
GO:GO:0005783 GO:GO:0016021 GO:GO:0030182 GO:GO:0005789
PANTHER:PTHR10994 HOVERGEN:HBG008971 CTD:6252 eggNOG:NOG306139
HOGENOM:HOG000134444 OrthoDB:EOG437RDX ChiTaRS:RTN1 EMBL:AB074899
EMBL:BC030455 EMBL:BC053926 EMBL:BC058579 EMBL:BK001694
IPI:IPI00395193 RefSeq:NP_001007597.1 RefSeq:NP_703187.2
UniGene:Mm.221275 ProteinModelPortal:Q8K0T0 SMR:Q8K0T0
IntAct:Q8K0T0 STRING:Q8K0T0 PhosphoSite:Q8K0T0 PaxDb:Q8K0T0
PRIDE:Q8K0T0 Ensembl:ENSMUST00000078505 GeneID:104001
KEGG:mmu:104001 GeneTree:ENSGT00390000009934 InParanoid:Q8K0T0
NextBio:356325 Bgee:Q8K0T0 CleanEx:MM_RTN1 Genevestigator:Q8K0T0
GermOnline:ENSMUSG00000021087 Uniprot:Q8K0T0
Length = 780
Score = 115 (45.5 bits), Expect = 0.00025, P = 0.00025
Identities = 39/176 (22%), Positives = 73/176 (41%)
Query: 24 AADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTXXXXXXXXXXXXXXXXXXXXX 77
A D++ WR + + G +LL +L + V Y
Sbjct: 593 AIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 652
Query: 78 XXXXXNRPAPPLPELH--LSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALY 135
P EL LS+E + + ++ VN L + + L ++ + A+
Sbjct: 653 QKTDEGHPFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVL 712
Query: 136 LWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
+WL+++VG L + LTL ++V + TLP +Y +++ +D+Y L + + KI
Sbjct: 713 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVAKI 768
>UNIPROTKB|E2R925 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03007528
EMBL:AAEX03007529 Ensembl:ENSCAFT00000004428 Uniprot:E2R925
Length = 1186
Score = 116 (45.9 bits), Expect = 0.00030, P = 0.00030
Identities = 29/111 (26%), Positives = 57/111 (51%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ +SEE+V + + VN + + + L + + A+ +W+ ++VG L + LT
Sbjct: 1074 EVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLT 1133
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L +L+ + ++P +YER++ ID Y L + ++ KI + RK
Sbjct: 1134 LLILALISLFSVPVIYERHQAQIDHYLGLANKSVKDAMAKIQAKIPGLKRK 1184
>UNIPROTKB|Q9NQC3 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0060317 "cardiac epithelial to mesenchymal
transition" evidence=IEA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=IDA] [GO:0030517 "negative regulation of axon extension"
evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0042981
"regulation of apoptotic process" evidence=NAS] [GO:0006915
"apoptotic process" evidence=NAS] [GO:0021801 "cerebral cortex
radial glia guided migration" evidence=ISS] [GO:0007413 "axonal
fasciculation" evidence=ISS] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=ISS] [GO:0071786 "endoplasmic
reticulum tubular network organization" evidence=IMP] [GO:0030334
"regulation of cell migration" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005886 GO:GO:0005635 Reactome:REACT_111102
GO:GO:0006915 GO:GO:0048011 Pathway_Interaction_DB:p75ntrpathway
EMBL:CH471053 GO:GO:0043234 GO:GO:0042981 GO:GO:0014823
GO:GO:0007568 GO:GO:0051930 GO:GO:0043025 GO:GO:0033603
GO:GO:0045665 GO:GO:0043005 GO:GO:0001525 GO:GO:0030334
GO:GO:0030176 GO:GO:0060317 GO:GO:0007413 GO:GO:0048709
GO:GO:0043209 GO:GO:0030517 GO:GO:0021553 EMBL:AC013414
GO:GO:0045687 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG306139 EMBL:AF087901 EMBL:AF148537 EMBL:AF148538
EMBL:AJ251383 EMBL:AJ251384 EMBL:AJ251385 EMBL:AB040462
EMBL:AB040463 EMBL:AF333336 EMBL:AY102285 EMBL:AY102276
EMBL:AY102277 EMBL:AY102278 EMBL:AY102279 EMBL:AY123245
EMBL:AY123246 EMBL:AY123247 EMBL:AY123248 EMBL:AY123249
EMBL:AY123250 EMBL:AB015639 EMBL:AF077050 EMBL:AF132047
EMBL:AF132048 EMBL:AF320999 EMBL:AB020693 EMBL:AF125103
EMBL:AF177332 EMBL:AC092461 EMBL:AC093165 EMBL:BC001035
EMBL:BC007109 EMBL:BC010737 EMBL:BC012619 EMBL:BC014366
EMBL:BC016165 EMBL:BC026788 EMBL:BC068991 EMBL:BC150182
EMBL:BC152425 EMBL:BC152555 EMBL:AF063601 IPI:IPI00021766
IPI:IPI00219207 IPI:IPI00298289 IPI:IPI00477663 IPI:IPI00478442
IPI:IPI00894213 RefSeq:NP_008939.1 RefSeq:NP_065393.1
RefSeq:NP_722550.1 RefSeq:NP_997403.1 RefSeq:NP_997404.1
UniGene:Hs.741208 PDB:2G31 PDB:2JV5 PDBsum:2G31 PDBsum:2JV5
ProteinModelPortal:Q9NQC3 SMR:Q9NQC3 IntAct:Q9NQC3 MINT:MINT-154434
STRING:Q9NQC3 PhosphoSite:Q9NQC3 DMDM:17369290 PaxDb:Q9NQC3
PRIDE:Q9NQC3 DNASU:57142 Ensembl:ENST00000317610
Ensembl:ENST00000337526 Ensembl:ENST00000357376
Ensembl:ENST00000357732 Ensembl:ENST00000394609
Ensembl:ENST00000394611 Ensembl:ENST00000404909
Ensembl:ENST00000405240 GeneID:57142 KEGG:hsa:57142 UCSC:uc002ryd.3
UCSC:uc002ryf.3 CTD:57142 GeneCards:GC02M055199 H-InvDB:HIX0002059
HGNC:HGNC:14085 HPA:CAB005388 MIM:604475 neXtProt:NX_Q9NQC3
PharmGKB:PA34883 HOVERGEN:HBG023134 InParanoid:Q9NQC3 ChiTaRS:RTN4
EvolutionaryTrace:Q9NQC3 GenomeRNAi:57142 NextBio:63075
PMAP-CutDB:Q9NQC3 ArrayExpress:Q9NQC3 Bgee:Q9NQC3
Genevestigator:Q9NQC3 GermOnline:ENSG00000115310 GO:GO:0070571
GO:GO:0048679 GO:GO:2000172 Uniprot:Q9NQC3
Length = 1192
Score = 116 (45.9 bits), Expect = 0.00030, P = 0.00030
Identities = 29/111 (26%), Positives = 57/111 (51%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ +SEE+V + + VN + + + L + + A+ +W+ ++VG L + LT
Sbjct: 1080 EVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLT 1139
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L +L+ + ++P +YER++ ID Y L + ++ KI + RK
Sbjct: 1140 LLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKIPGLKRK 1190
>UNIPROTKB|J9P0R7 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:HTSENKT
EMBL:AAEX03007528 EMBL:AAEX03007529 Ensembl:ENSCAFT00000045541
Uniprot:J9P0R7
Length = 1198
Score = 116 (45.9 bits), Expect = 0.00031, P = 0.00031
Identities = 29/111 (26%), Positives = 57/111 (51%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ +SEE+V + + VN + + + L + + A+ +W+ ++VG L + LT
Sbjct: 1086 EVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLT 1145
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L +L+ + ++P +YER++ ID Y L + ++ KI + RK
Sbjct: 1146 LLILALISLFSVPVIYERHQAQIDHYLGLANKSVKDAMAKIQAKIPGLKRK 1196
>UNIPROTKB|Q08D83 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9913 "Bos taurus"
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 HOVERGEN:HBG000838
HOGENOM:HOG000015254 EMBL:BT030534 EMBL:BC123892 EMBL:BC149634
EMBL:BK001797 IPI:IPI00687234 IPI:IPI00837997 RefSeq:NP_872598.1
UniGene:Bt.16079 ProteinModelPortal:Q08D83 SMR:Q08D83 PRIDE:Q08D83
GeneID:359721 KEGG:bta:359721 CTD:10313 eggNOG:NOG303514
InParanoid:Q08D83 OrthoDB:EOG4229M0 NextBio:20812750 Uniprot:Q08D83
Length = 256
Score = 106 (42.4 bits), Expect = 0.00058, P = 0.00058
Identities = 24/111 (21%), Positives = 57/111 (51%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
++ LS E + +N L + + L ++ ++A+++WL+++VG + + +T
Sbjct: 143 DITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGIT 202
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L + ++V ++P +YE+Y+ ID Y + + + + KI + +K
Sbjct: 203 LLILAELLVFSIPIVYEKYKTQIDHYVGIARDQTKSIVEKIQAKLPGIAKK 253
>UNIPROTKB|D4A1U2 [details] [associations]
symbol:Rtn3 "Reticulon 3, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620988 GO:GO:0005783 EMBL:CH473953 PANTHER:PTHR10994
UniGene:Rn.11652 IPI:IPI00562895 Ensembl:ENSRNOT00000046063
Uniprot:D4A1U2
Length = 256
Score = 106 (42.4 bits), Expect = 0.00058, P = 0.00058
Identities = 25/111 (22%), Positives = 57/111 (51%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
++ LS E + VN L + + L ++ ++A+++WL+++VG + + +T
Sbjct: 143 DITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGIT 202
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L + ++V ++P +YE+Y+ ID Y + + + + KI + +K
Sbjct: 203 LLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTKSIVEKIQAKLPGIAKK 253
>UNIPROTKB|F1RPY3 [details] [associations]
symbol:RTN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 OMA:VMWLLTY EMBL:FP089542
EMBL:AEMK01195949 Ensembl:ENSSSCT00000014266 Uniprot:F1RPY3
Length = 236
Score = 105 (42.0 bits), Expect = 0.00063, P = 0.00063
Identities = 23/111 (20%), Positives = 57/111 (51%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
++ LS E + +N L + + L ++ ++A+++WL+++VG + + +T
Sbjct: 123 DITLSSEAFHNYVNAAMVHINKALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGIT 182
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L + +++ ++P +YE+Y+ ID Y + + + + KI + +K
Sbjct: 183 LLILAELLIFSVPVVYEKYKTQIDHYVGIARDQTKSIVEKIQAKVPGIAKK 233
>ZFIN|ZDB-GENE-030131-2426 [details] [associations]
symbol:rtn1a "reticulon 1a" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 ZFIN:ZDB-GENE-030131-2426 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG008971 GeneTree:ENSGT00390000009934
EMBL:BX072537 EMBL:AY555044 IPI:IPI00613432 RefSeq:NP_001025138.2
UniGene:Dr.77106 SMR:Q4G5V7 Ensembl:ENSDART00000076574
GeneID:323706 KEGG:dre:323706 CTD:323706 InParanoid:Q4G5V7
OMA:ISHGEER NextBio:20808397 Uniprot:Q4G5V7
Length = 818
Score = 112 (44.5 bits), Expect = 0.00064, P = 0.00064
Identities = 26/111 (23%), Positives = 60/111 (54%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ LS + +++ + +N + + + L ++ + A+ +WL+++VG L + LT
Sbjct: 707 EISLSADQISKYVDKTQLYINTTMKELRRLFLVQDLVDSIKFAVLMWLLTYVGALFNGLT 766
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVSKVRK 201
L +++ + ++P +YE+Y+ ID+Y L ++ + KI E+ +K
Sbjct: 767 LLILAVISMFSVPVVYEKYQTQIDQYLGLVRTQVNSVMGKIREKVPGAKKK 817
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.140 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 210 184 0.00078 110 3 11 22 0.38 32
31 0.40 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 598 (64 KB)
Total size of DFA: 149 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.91u 0.12s 15.03t Elapsed: 00:00:00
Total cpu time: 14.92u 0.12s 15.04t Elapsed: 00:00:00
Start: Fri May 10 14:44:45 2013 End: Fri May 10 14:44:45 2013