BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028337
(210 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M392|RTNLL_ARATH Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2
SV=1
Length = 203
Score = 199 bits (506), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 149/192 (77%)
Query: 1 MGSSSDRLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSL 60
M SSSD+LF R RTIHEILGGG+ ADV+LWR+KNV+VGI+ VT+A+W+VFE YT+ +L
Sbjct: 1 MSSSSDKLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTL 60
Query: 61 VSSVLLLLIAILFLWAKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDM 120
+SSVLLLL++ILFLW+K+A+ILNRP+PPLPE +SE M E + +R VN L VS D+
Sbjct: 61 ISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDI 120
Query: 121 ALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILG 180
A+ ++S L+ +VA+ L+L+S +G L DF TL +TS+++V+T+PA YERYED+I
Sbjct: 121 AMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFI 180
Query: 181 YRKLRQLYVKID 192
K R+LY++++
Sbjct: 181 CNKTRELYLRLE 192
>sp|Q8GYH6|RTNLP_ARATH Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2
SV=1
Length = 226
Score = 181 bits (458), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 138/210 (65%), Gaps = 2/210 (0%)
Query: 2 GSSSD-RLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSL 60
GSSSD RL RQ T+H+ +GGG AAD++LWRR+++++G+++++ AW++FE SG LS+
Sbjct: 18 GSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSV 77
Query: 61 VSSVLLLLIAILFLWAKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDM 120
S VLL++I I F+ A+ +A NR LPEL LSEEMVN AA R ++N L ++ D+
Sbjct: 78 SSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDV 137
Query: 121 ALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILG 180
+G + RLFF+V + LWL+S +G TL Y ++ +T+PALY +Y+ +DK
Sbjct: 138 TVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTI 197
Query: 181 YRKLRQLYVKIDEEFVSKVRKWILEKQKLS 210
+R+L Y +DE +S++ W L K K S
Sbjct: 198 HRRLSHHYKIVDENVISRL-SWSLSKDKDS 226
>sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1
SV=1
Length = 275
Score = 159 bits (403), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 131/202 (64%)
Query: 7 RLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSLVSSVLL 66
RLF R++ +H++LGGG AD+ +W+ K ++ G+L AAWVVFE Y LL+L+ V++
Sbjct: 72 RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMI 131
Query: 67 LLIAILFLWAKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNS 126
+++A+LFLW+ A +N+ P +PE+H+ EE + ++A+ +R +N S +++A G++
Sbjct: 132 VVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDL 191
Query: 127 RLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQ 186
+ F LW++S +GG +FLTL Y +LV++ T+P Y++YED +D +L++
Sbjct: 192 KKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKK 251
Query: 187 LYVKIDEEFVSKVRKWILEKQK 208
Y +DE+ +SK+ L+ +K
Sbjct: 252 QYAVLDEKVLSKIPLGPLKNKK 273
>sp|Q9FFS0|RTNLD_ARATH Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1
SV=1
Length = 257
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 130/206 (63%), Gaps = 4/206 (1%)
Query: 7 RLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSLVSSVLL 66
RLF R++ +H++LGGG AD+ LWR K V+ G+L A+WV+FE Y LL+ + +
Sbjct: 51 RLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAI 110
Query: 67 LLIAILFLWAKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNS 126
+A LFLW+ A +++ P +PE+H+ E+ + ++ + +R +N L++ +++A GK+
Sbjct: 111 FALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDV 170
Query: 127 RLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQ 186
+ F V LW++S +G +FLTL YT+ V++ T+P LYE+YED +D Y R++++
Sbjct: 171 KKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKK 230
Query: 187 LYVKIDE----EFVSKVRKWILEKQK 208
Y +DE + +SK+ + L K+K
Sbjct: 231 QYAVLDEKVLRKVISKIPRGALNKKK 256
>sp|O82352|RTNLE_ARATH Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1
SV=1
Length = 255
Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 124/193 (64%)
Query: 7 RLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSLVSSVLL 66
R+F R++ +H++LGGG ADV LWR K ++ +L V A WV+FE Y LLSL+ + +
Sbjct: 51 RMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISI 110
Query: 67 LLIAILFLWAKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNS 126
L + LFLW+ A ++N+ +P +PE+H+ EE VA+ +R +N + + +ALG++
Sbjct: 111 LALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDL 170
Query: 127 RLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQ 186
+ F V + LW+IS VG +FLTL Y VI+ T+P LYE++ED +D A ++L++
Sbjct: 171 KKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQK 230
Query: 187 LYVKIDEEFVSKV 199
YV DE+ +SK+
Sbjct: 231 QYVVFDEKVLSKI 243
>sp|Q9LT71|RTNLK_ARATH Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2
SV=1
Length = 200
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 110/160 (68%)
Query: 16 HEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSLVSSVLLLLIAILFLW 75
H+ LG G AD++LWR + V +L+ + W +FER+GY LLS VS+VLLLL+AI FLW
Sbjct: 14 HQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLW 73
Query: 76 AKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALY 135
AK+A +LNRP PP+P + + EE N+ A +R +N LS++ D+ + +N +V+L
Sbjct: 74 AKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLV 133
Query: 136 LWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDK 175
LW IS+VG L + LTL Y +++ L+ P +YE+Y+DHID+
Sbjct: 134 LWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDE 173
>sp|Q6DBN4|RTNLF_ARATH Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1
SV=1
Length = 253
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 121/193 (62%)
Query: 7 RLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSLVSSVLL 66
RLF R++ +H++LGGGL ADV LWR K ++ +L V A WV+FE Y LSLV +L+
Sbjct: 51 RLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILI 110
Query: 67 LLIAILFLWAKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNS 126
+A LFL + A A +N+ P +PE+H+ EE + + +R +N + + +ALG++
Sbjct: 111 FALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDL 170
Query: 127 RLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQ 186
+ F V LW+IS VG +FLTL Y V++ T+P LYE++ED +D A ++L++
Sbjct: 171 KKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKK 230
Query: 187 LYVKIDEEFVSKV 199
Y+ DE+ +SK+
Sbjct: 231 HYMVFDEKVLSKL 243
>sp|Q9SUT9|RTNLB_ARATH Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1
SV=1
Length = 271
Score = 157 bits (397), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 128/202 (63%)
Query: 7 RLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSLVSSVLL 66
RLF R+R +H++LGGG AD+ +W+ K ++ G+ AWV+FE Y LL+L+ V++
Sbjct: 68 RLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMI 127
Query: 67 LLIAILFLWAKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNS 126
+ +A+LFLW+ A +++ P +PE+H+ EE + ++A+ +R +N +S +++A G++
Sbjct: 128 VALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDI 187
Query: 127 RLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQ 186
+ F LW++S +GG FLTL Y +LV++ T+P Y++YED +D Y +L++
Sbjct: 188 KKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKK 247
Query: 187 LYVKIDEEFVSKVRKWILEKQK 208
Y +D + SK+ + L+ +K
Sbjct: 248 QYAVLDAKVFSKIPRGPLKDKK 269
>sp|Q9SH59|RTNLC_ARATH Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1
SV=1
Length = 255
Score = 154 bits (390), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 126/193 (65%)
Query: 7 RLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSLVSSVLL 66
RLF R++ +H++ GGG AD+ LWR K V+ G+L +W++FE Y LL+L + +
Sbjct: 47 RLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISI 106
Query: 67 LLIAILFLWAKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNS 126
L +A+LFLW+ A+ +++ +PE+H+ E++V ++A+ +R +N +V +D+A G++
Sbjct: 107 LALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDL 166
Query: 127 RLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQ 186
+ F V LW++S VG +FLTL Y + V++ T+P LYE+YED +D + R++++
Sbjct: 167 KKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKK 226
Query: 187 LYVKIDEEFVSKV 199
YV+ D + +SKV
Sbjct: 227 QYVEFDVKVLSKV 239
>sp|Q6NPD8|RTNLJ_ARATH Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2
SV=1
Length = 201
Score = 153 bits (387), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 119/188 (63%)
Query: 12 QRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSLVSSVLLLLIAI 71
+ ++H+ + G AD+I+W+ + +L T W +FE+ GY+ V + LL + I
Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVI 61
Query: 72 LFLWAKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFR 131
LFLWAK+A + NRP P LP L ++EE V VA IR +N L+V++++ +G+N++ FR
Sbjct: 62 LFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFR 121
Query: 132 VALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
V++ LW +SFVG +FLT+ Y +V+ L +P LYERY+D ID+ L +R ++ Y KI
Sbjct: 122 VSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKI 181
Query: 192 DEEFVSKV 199
DE + K+
Sbjct: 182 DERLLQKI 189
>sp|Q9SS37|RTNLH_ARATH Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1
SV=1
Length = 247
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 109/197 (55%)
Query: 3 SSSDRLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSLVS 62
S +RLF RQ+ IH +LGGG +ADV+LWR K ++ +L+ A WV+FE + LSLV
Sbjct: 40 SRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVC 99
Query: 63 SVLLLLIAILFLWAKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMAL 122
LLL + F+W+ A+ LNR +P L L ++ EV + VN L QD+A
Sbjct: 100 YALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLAC 159
Query: 123 GKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYR 182
N + F + LW+ + VG +FLT+ Y V T+P LYERYED +D +
Sbjct: 160 KGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIM 219
Query: 183 KLRQLYVKIDEEFVSKV 199
K Y K+D F+S++
Sbjct: 220 KFHSHYKKLDTGFLSRI 236
>sp|Q9LJQ5|RTNLI_ARATH Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2
SV=1
Length = 225
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 117/220 (53%), Gaps = 11/220 (5%)
Query: 2 GSSSD-----------RLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVF 50
GSSSD +LF RQR+IH I GGG AD++LWR + +++ W +
Sbjct: 6 GSSSDSEDERTIHKTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLM 65
Query: 51 ERSGYTLLSLVSSVLLLLIAILFLWAKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRV 110
E Y ++L+ + + F+W+ A+ LN P +PE+ L E ++A R
Sbjct: 66 EVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRF 125
Query: 111 NDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYE 170
N L+ D+A G++ LFF + L+++S +G +F+ L + V + TLP +YE YE
Sbjct: 126 NQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYE 185
Query: 171 DHIDKYAILGYRKLRQLYVKIDEEFVSKVRKWILEKQKLS 210
D +D A RK+++LY K+D +SK+ + ++ +K +
Sbjct: 186 DDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNKKFT 225
>sp|Q9M145|RTNLG_ARATH Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=3
SV=2
Length = 244
Score = 110 bits (276), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 112/193 (58%), Gaps = 3/193 (1%)
Query: 7 RLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSLVSSVLL 66
R+F R+R IH +LGGG ADV+LWR K VT+G+L W++F G LL+ + +
Sbjct: 53 RMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSI 112
Query: 67 LLIAILFLWAKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNS 126
L + + FLW+ A LN+ + ++++ E+ + + A+ + +N + + +AL ++
Sbjct: 113 LFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDI 169
Query: 127 RLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQ 186
+ F + LWL+S +G FL+L Y V++ T+P LYE+YED ID A ++++
Sbjct: 170 KNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKK 229
Query: 187 LYVKIDEEFVSKV 199
Y + +F+SK+
Sbjct: 230 HYQVFEAKFLSKI 242
>sp|O64837|RTNLM_ARATH Reticulon-like protein B13 OS=Arabidopsis thaliana GN=RTNLB13 PE=2
SV=1
Length = 206
Score = 90.9 bits (224), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 83/154 (53%)
Query: 23 LAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSLVSSVLLLLIAILFLWAKAAAIL 82
+ D+ LWRRK + LLV+ + W++ G+T +++VS + + +++++FLW +L
Sbjct: 15 IVEDIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLL 74
Query: 83 NRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFV 142
++ P L L +SEE V E R + + + + +F R L W++S +
Sbjct: 75 SKVEPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRI 134
Query: 143 GGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKY 176
G L DF T + LV+ LT+P L+E Y D I K+
Sbjct: 135 GNLLDFHTCLFIGLVMGLTVPKLWEEYGDQIQKH 168
>sp|A2RVT6|RTNLN_ARATH Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2
SV=2
Length = 215
Score = 80.1 bits (196), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 6/189 (3%)
Query: 15 IHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSLVSSVLLLLIAILFL 74
++ LGGG AD++ W+ K + IL V W +FE Y ++ + +LLL I I +
Sbjct: 22 LYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLI 81
Query: 75 WA--KAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRV 132
W+ ++ ++ P + +L +SE + ++N F+ D++ GK+ RL F
Sbjct: 82 WSYIGSSQLIQSKPPSINDLRISESNWR----FLFNKINWFIIKLYDISSGKDFRLLFLA 137
Query: 133 ALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKID 192
+ LW++S VG LTL Y V + T+P LYE+YE+ + A R +++L K +
Sbjct: 138 VVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKLLNKFN 197
Query: 193 EEFVSKVRK 201
+ ++K+ K
Sbjct: 198 SKVINKIPK 206
>sp|Q9ZU43|RTNLO_ARATH Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2
SV=2
Length = 191
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 92/164 (56%), Gaps = 7/164 (4%)
Query: 15 IHEILGGGLAADVILWRRK-NVTVGILLVTLAAWVVFERSGYTLLSLVSSVLLLLIAILF 73
+ +ILG G AD+ LW+ K N + +++ TL W + E L+ L+ S+LLLL+ ILF
Sbjct: 4 VDQILGDGAVADLCLWKDKINSGITLVMATLF-WFLLEFMEARLVPLLCSILLLLMLILF 62
Query: 74 LWAKAAAILNRPAPPLP-ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRV 132
LWAK + PP P EL+ + + + +++ L + ++A GK+++ F +
Sbjct: 63 LWAKFGEVFFTRRPPTPEELNQPDSPLKALFSMMEGH----LLMLYEIAYGKDNKTFLKT 118
Query: 133 ALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKY 176
LY+ +I +G LT+ Y LV +T+P +Y ++++ ID +
Sbjct: 119 ILYVAIIYNIGSYISLLTILYICLVCSMTIPVVYMQFQELIDSF 162
>sp|Q9JK11|RTN4_RAT Reticulon-4 OS=Rattus norvegicus GN=Rtn4 PE=1 SV=1
Length = 1163
Score = 57.8 bits (138), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 12/204 (5%)
Query: 10 KRQRTIHEILGGGLA----ADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTLLS 59
K R++ +L L+ D++ WR + V G LL++L + + + Y L+
Sbjct: 958 KEDRSLSAVLSAELSKTSVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALA 1017
Query: 60 LVSSVLLLLIAILFLWAKAAAILNRP--APPLPELHLSEEMVNEVAALIRTRVNDFLSVS 117
L+S + I + A + P A E+ +SEE+V + + VN +
Sbjct: 1018 LLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKEL 1077
Query: 118 QDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYA 177
+ + L + + A+ +W+ ++VG L + LTL +L+ + ++P +YER++ ID Y
Sbjct: 1078 RRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYL 1137
Query: 178 ILGYRKLRQLYVKIDEEFVSKVRK 201
L + ++ KI + RK
Sbjct: 1138 GLANKSVKDAMAKIQAKIPGLKRK 1161
>sp|Q99P72|RTN4_MOUSE Reticulon-4 OS=Mus musculus GN=Rtn4 PE=1 SV=2
Length = 1162
Score = 57.4 bits (137), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 12/204 (5%)
Query: 10 KRQRTIHEILGGGL----AADVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTLLS 59
K R++ +L L D++ WR + V G LL++L + + + Y L+
Sbjct: 957 KEDRSLTAVLSAELNKTSVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALA 1016
Query: 60 LVSSVLLLLIAILFLWAKAAAILNRP--APPLPELHLSEEMVNEVAALIRTRVNDFLSVS 117
L+S + I + A + P A E+ +SEE+V + + VN +
Sbjct: 1017 LLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKEL 1076
Query: 118 QDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYA 177
+ + L + + A+ +W+ ++VG L + LTL +L+ + ++P +YER++ ID Y
Sbjct: 1077 RRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQAQIDHYL 1136
Query: 178 ILGYRKLRQLYVKIDEEFVSKVRK 201
L + ++ KI + RK
Sbjct: 1137 GLANKSVKDAMAKIQAKIPGLKRK 1160
>sp|Q9NQC3|RTN4_HUMAN Reticulon-4 OS=Homo sapiens GN=RTN4 PE=1 SV=2
Length = 1192
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 26 DVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTLLSLVSSVLLLLIAILFLWAKAA 79
D++ WR + V G LL++L + + + Y L+L+S + I + A
Sbjct: 1007 DLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAIQK 1066
Query: 80 AILNRP--APPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLW 137
+ P A E+ +SEE+V + + VN + + + L + + A+ +W
Sbjct: 1067 SDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMW 1126
Query: 138 LISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVS 197
+ ++VG L + LTL +L+ + ++P +YER++ ID Y L + ++ KI +
Sbjct: 1127 VFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKIPG 1186
Query: 198 KVRK 201
RK
Sbjct: 1187 LKRK 1190
>sp|Q6RJR6|RTN3_RAT Reticulon-3 OS=Rattus norvegicus GN=Rtn3 PE=1 SV=1
Length = 940
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 26 DVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTLLSLVSSVLLLLIAILFLWAKAA 79
D+I WR + G I+L++LAA+ V Y +L+L+S + + + A
Sbjct: 754 DLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAVQK 813
Query: 80 AILNRPAPPL--PELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLW 137
+ P ++ LS E + VN L + + L ++ ++A+++W
Sbjct: 814 SEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVFMW 873
Query: 138 LISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVS 197
L+++VG + + +TL + ++V ++P +YE+Y+ ID Y + + + + KI +
Sbjct: 874 LMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTKSIVEKIQAKLPG 933
Query: 198 KVRK 201
+K
Sbjct: 934 IAKK 937
>sp|Q9ES97|RTN3_MOUSE Reticulon-3 OS=Mus musculus GN=Rtn3 PE=1 SV=2
Length = 964
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 26 DVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTLLSLVSSVLLLLIAILFLWAKAA 79
D+I WR + G I+L++LAA+ V Y +L+L+S + + + A
Sbjct: 778 DLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAVQK 837
Query: 80 AILNRPAPPL--PELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLW 137
+ P ++ LS E + VN L + + L ++ ++A+++W
Sbjct: 838 SEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVFMW 897
Query: 138 LISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVS 197
L+++VG + + +TL + ++V ++P +YE+Y+ ID Y + + + + KI +
Sbjct: 898 LMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTKSIVEKIQAKLPG 957
Query: 198 KVRK 201
+K
Sbjct: 958 IAKK 961
>sp|O95197|RTN3_HUMAN Reticulon-3 OS=Homo sapiens GN=RTN3 PE=1 SV=2
Length = 1032
Score = 53.5 bits (127), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 26 DVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTLLSLVSSVLLLLIAILFLWAKAA 79
D+I WR + G I+L++LAA+ V Y +L+L+S + I + A
Sbjct: 846 DLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAVQK 905
Query: 80 AILNRPAPPL--PELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLW 137
+ P ++ LS E + +N L + + L ++ ++A+++W
Sbjct: 906 SEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVFMW 965
Query: 138 LISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVS 197
L+++VG + + +TL + +++ ++P +YE+Y+ ID Y + + + + KI +
Sbjct: 966 LMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTKSIVEKIQAKLPG 1025
Query: 198 KVRK 201
+K
Sbjct: 1026 IAKK 1029
>sp|Q68EW1|RTN3B_XENLA Reticulon-3-B OS=Xenopus laevis GN=rtn3-b PE=2 SV=1
Length = 214
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 20 GGGLAA-DVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTLLSLVSSVLLLLIAIL 72
G G A D++ WR + + G +LL++LAA+ + Y +LSL+S + +
Sbjct: 21 GSGCAVRDLLYWRDVKQSGMVFGGTMVLLLSLAAFSIISVISYLVLSLLSVTISFRVYKS 80
Query: 73 FLWAKAAAILNRPAPPLPE--LHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFF 130
L A P PL E + LS + + + VN L + L ++
Sbjct: 81 VLQAVQKTEEGHPFKPLLEKDIALSSDSFQKGLSSSLAHVNHALKSIVRLFLVEDLVDSL 140
Query: 131 RVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVK 190
++AL +WL++++G + + +TL +++ T P +YE+Y+ ID Y L + +++ + K
Sbjct: 141 KLALLMWLMTYIGAVFNGITLLILGVLLAFTTPLVYEKYKVQIDHYVSLVHSQVKSITEK 200
Query: 191 IDEEFVSKVRK 201
I + ++K
Sbjct: 201 IQAKLPGALKK 211
>sp|Q28D16|RTN3_XENTR Reticulon-3 OS=Xenopus tropicalis GN=rtn3 PE=2 SV=1
Length = 213
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 9/191 (4%)
Query: 20 GGGLAA-DVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTLLSLVSSVLLLLIAIL 72
G G A D++ WR + + G +LL++LAA+ + Y +LSL++ + +
Sbjct: 20 GSGCAVQDLLYWRDVKQSGMVFGGTMVLLLSLAAFSIISVISYLVLSLLAVTISYRVYKS 79
Query: 73 FLWAKAAAILNRPAPPLPE--LHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFF 130
L A P PL E + LS + + + VN L + L ++
Sbjct: 80 VLQAVQKTDEGHPFKPLLEKDIALSSDAFQKALSTSLAHVNHALKYIVRLFLVEDLVDSL 139
Query: 131 RVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVK 190
++AL +WL+++VG + + +TL +++ T P +YE+Y+ ID Y L + ++ + K
Sbjct: 140 KLALLMWLMTYVGAVFNGITLLILGVLLAFTAPIVYEKYKVQIDHYVSLVHSHVKSITEK 199
Query: 191 IDEEFVSKVRK 201
I + ++K
Sbjct: 200 IQAKLPGALKK 210
>sp|Q5J6M8|RTN3A_XENLA Reticulon-3-A OS=Xenopus laevis GN=rtn3-a PE=2 SV=2
Length = 214
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 20 GGGLAA-DVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTLLSLVSSVLLLLIAIL 72
G G A D++ WR + + G +LL++LAA+ + Y +LSL++ + +
Sbjct: 21 GSGCAVRDLLYWRDVKQSGMVFGGTMVLLLSLAAFSIISVISYLVLSLLTVTISYRVYKS 80
Query: 73 FLWAKAAAILNRPAPPLPE--LHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFF 130
L A P PL E + LS + + VN L + L +
Sbjct: 81 VLQAVQKTDEGHPFKPLLEKDITLSSDSFQKALTASLAHVNHALKYIVRLFLVDDLVDSL 140
Query: 131 RVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVK 190
++AL +WL+++VG + + +TL +++ T P +YE+Y+ ID Y L + +++ + K
Sbjct: 141 KLALLMWLMTYVGAVFNGITLLILGVLLTFTAPIVYEKYKVQIDHYVSLVHSQVKSITEK 200
Query: 191 IDEEFVSKVRK 201
I + ++K
Sbjct: 201 IQAKLPGALKK 211
>sp|A7MC64|RTN1_XENTR Reticulon-1 OS=Xenopus tropicalis GN=rtn1 PE=2 SV=2
Length = 764
Score = 50.8 bits (120), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 55/101 (54%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ LS+E + + ++ N + + + L ++ + A+ +WL+++VG L + LT
Sbjct: 653 EISLSQEQIQKYTDCLQAYTNSIVKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 712
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
L ++V + +LP +Y++Y+ ID+Y L + + KI
Sbjct: 713 LLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMNTIVTKI 753
>sp|Q5MY90|RTN1B_XENLA Reticulon-1-B OS=Xenopus laevis GN=rtn1-b PE=2 SV=1
Length = 752
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 53/101 (52%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ LS+E + + + N + + L ++ + A+ +WL+++VG L + LT
Sbjct: 641 EISLSQEQIQKYTGCFQLYTNSIAKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 700
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
L ++V + +LP +Y++Y+ ID+Y L + + KI
Sbjct: 701 LLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMNIIVTKI 741
>sp|Q5IS59|RTN1_PANTR Reticulon-1 OS=Pan troglodytes GN=RTN1 PE=2 SV=1
Length = 776
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ LS+E + + ++ VN L + + L ++ + A+ +WL+++VG L + LT
Sbjct: 664 EITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 723
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
L ++V + TLP +Y +++ ID+Y L + + KI
Sbjct: 724 LLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKI 764
>sp|Q16799|RTN1_HUMAN Reticulon-1 OS=Homo sapiens GN=RTN1 PE=1 SV=1
Length = 776
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 55/101 (54%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ LS+E + + ++ VN L + + L ++ + A+ +WL+++VG L + LT
Sbjct: 664 EITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 723
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
L ++V + TLP +Y +++ ID+Y L + + KI
Sbjct: 724 LLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKI 764
>sp|Q64548|RTN1_RAT Reticulon-1 OS=Rattus norvegicus GN=Rtn1 PE=2 SV=1
Length = 777
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 55/101 (54%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ LS+E + + ++ VN L + + L ++ + A+ +WL+++VG L + LT
Sbjct: 665 EITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 724
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
L ++V + TLP +Y +++ +D+Y L + + KI
Sbjct: 725 LLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVAKI 765
>sp|Q8K0T0|RTN1_MOUSE Reticulon-1 OS=Mus musculus GN=Rtn1 PE=1 SV=1
Length = 780
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 55/101 (54%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ LS+E + + ++ VN L + + L ++ + A+ +WL+++VG L + LT
Sbjct: 668 EITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 727
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKI 191
L ++V + TLP +Y +++ +D+Y L + + KI
Sbjct: 728 LLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVAKI 768
>sp|Q67ZE1|HSDD2_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
OS=Arabidopsis thaliana GN=3BETAHSD/D2 PE=2 SV=2
Length = 564
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 6/176 (3%)
Query: 2 GSSSDRLFKRQRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSLV 61
GS S R + + ILGGG AD +LW+ T+ + + ++ + F +G T+++ +
Sbjct: 364 GSQSKREGPSKAS--RILGGGKVADTLLWKDLKQTLIAIFILISIYYNFVATGSTVVTAL 421
Query: 62 SSVLLLLIAILFLWAK-AAAILNRPAPPLP--ELHLSEEMVNEVAALIRTRVNDFLSVSQ 118
S LL+ LFL I +P + HLS++ ++++ + + N + +
Sbjct: 422 SKALLVASVFLFLHGILPEKIFGYTVEKIPASQFHLSKDSSHDLSLSVISSWNTTVKALR 481
Query: 119 DMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHID 174
+ G + FF+V L +S G ++ ++ L I +YE+ E ID
Sbjct: 482 SLCQGNDWSFFFKVVFVLLALSLAGAIS-LHSIFVIGLPIAFLAFLVYEKKEQEID 536
>sp|Q6IFY7|RTN1A_XENLA Reticulon-1-A OS=Xenopus laevis GN=rtn1-a PE=2 SV=1
Length = 207
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 55/104 (52%)
Query: 91 ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLT 150
E+ LS+E + + ++ N + + L ++ + A+ +WL+++VG L + LT
Sbjct: 96 EISLSQEQIQKYTDCLQVYTNSIAKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 155
Query: 151 LGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEE 194
L ++V + +LP +Y++Y+ ID+Y L + + KI +
Sbjct: 156 LLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMNTIMTKIQAK 199
>sp|Q08D83|RTN3_BOVIN Reticulon-3 OS=Bos taurus GN=RTN3 PE=2 SV=1
Length = 256
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 26 DVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTLLSLVSSVLLLLIAILFLWAKAA 79
D+I WR + G I+L++LAA+ V Y +L+L+S + + + A
Sbjct: 70 DLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAVQK 129
Query: 80 AILNRPAPPL--PELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLW 137
+ P ++ LS E + +N L + + L ++ ++A+++W
Sbjct: 130 SEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVFMW 189
Query: 138 LISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVS 197
L+++VG + + +TL + ++V ++P +YE+Y+ ID Y + + + + KI +
Sbjct: 190 LMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIARDQTKSIVEKIQAKLPG 249
Query: 198 KVRK 201
+K
Sbjct: 250 IAKK 253
>sp|Q5RBL9|RTN3_PONAB Reticulon-3 OS=Pongo abelii GN=RTN3 PE=2 SV=1
Length = 236
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 26 DVILWR---RKNVTVG---ILLVTLAAWVVFERSGYTLLSLVSSVLLLLIAILFLWAKAA 79
D+I WR + G I+L++LAA+ V Y +L+L+S + I + A
Sbjct: 50 DLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAVQK 109
Query: 80 AILNRPAPPL--PELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLW 137
+ P ++ LS E + +N L + + L ++ ++A+++W
Sbjct: 110 SEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVFMW 169
Query: 138 LISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKIDEEFVS 197
L+++VG + + +TL + +++ ++P +YE+Y+ ID Y + + + + KI +
Sbjct: 170 LMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTKSIVEKIQAKLPG 229
Query: 198 KVRK 201
+K
Sbjct: 230 IAKK 233
>sp|A9X4U2|HSDD3_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3
OS=Arabidopsis thaliana GN=3BETAHSD/D3 PE=2 SV=2
Length = 561
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 10/165 (6%)
Query: 12 QRTIHEILGGGLAADVILWRRKNVTVGILLVTLAAWVVFERSGYTLLSLVSSVLLL---- 67
Q T ++LG G AD++LWR + T LV + F SG T S + +L +
Sbjct: 367 QSTADQLLGCGKVADILLWRNEKKTFVSFLVLNLFYYWFFFSGNTFTSSAAQLLFIFAVA 426
Query: 68 LIAILFLWAKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSR 127
L + F+ +K PP +SE V ++++ I N + + ++ G +
Sbjct: 427 LYGVSFVPSKIFGFQVNKIPPW-RFEISESAVRDLSSDIVVVWNQGVRSFKSLSSGGDWI 485
Query: 128 LFFRVALYLWLISFV--GGLTDFLTLGYTSLVIVLTLPALYERYE 170
FF++A L+L+ + L FL +T + T +YE+YE
Sbjct: 486 KFFKIAGSLYLLKLIVSRSLAAFL---FTVMSFSFTGFFIYEQYE 527
>sp|P0C941|RTNLU_ARATH Reticulon-like protein B23 OS=Arabidopsis thaliana GN=RTNLB23 PE=2
SV=1
Length = 155
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 56 TLLSLVSSVLLLLIAILFLWAKAAAILNRPAPPLP-ELHLSEEMVNEVAALIRTRVNDFL 114
TLLSL+S VL++L++ L + LN P P E +S++ + A + V
Sbjct: 27 TLLSLISDVLIVLLSSLAILGLLFRHLNVSVPVDPLEWQISQDTACNIVARLANTVGAAE 86
Query: 115 SVSQDMALGKNSRLFFRVALYLWLISFVGGLTDFLTLGYTSLVI 158
SV + A G + RLF +V + L+ ++ +G + +T+ Y L +
Sbjct: 87 SVLRVAATGHDKRLFVKVVICLYFLAALGRIISGVTIAYAGLCL 130
>sp|O70622|RTN2_MOUSE Reticulon-2 OS=Mus musculus GN=Rtn2 PE=1 SV=1
Length = 471
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 130 FRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYV 189
++AL ++++FVG + + LTL +V + T+P LY +++ ID+Y L +L +
Sbjct: 386 LKLALLFYILTFVGAIFNGLTLVILGVVALFTVPLLYRQHQAQIDQYVGLVTNQLSHIKA 445
Query: 190 KI 191
KI
Sbjct: 446 KI 447
>sp|O75298|RTN2_HUMAN Reticulon-2 OS=Homo sapiens GN=RTN2 PE=1 SV=1
Length = 545
Score = 37.7 bits (86), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 130 FRVALYLWLISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYV 189
++AL ++++FVG + + LTL ++ + T+P LY +++ ID+Y L +L +
Sbjct: 459 LKLALLFYILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLSHIKA 518
Query: 190 KI 191
KI
Sbjct: 519 KI 520
>sp|Q3Z7V6|PNP_DEHE1 Polyribonucleotide nucleotidyltransferase OS=Dehalococcoides
ethenogenes (strain 195) GN=pnp PE=3 SV=1
Length = 720
Score = 33.5 bits (75), Expect = 0.96, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 80 AILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNS 126
A L + P+P L + EE+ VAA ++ RVN+ LS QD L +N+
Sbjct: 224 AKLGKEKLPVPVLEIPEEVKAAVAAFVKGRVNEALS-HQDKTLRENA 269
>sp|Q4FZ58|RTN2_XENTR Reticulon-2 OS=Xenopus tropicalis GN=rtn2 PE=2 SV=2
Length = 321
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 81/175 (46%), Gaps = 8/175 (4%)
Query: 26 DVILWRRKNVTVGILL-VTLAAWVVFERSGYTLLSLVSSVLLLLIAILFLWAKAAAILNR 84
D++ WR ++ G L VTL+ + + S ++ + ++L + L L+ K L R
Sbjct: 136 DLLYWRDILLSAGCLTGVTLSLLCLSQFSVISVFAYGCLIILSVTLTLRLYTKLLHALKR 195
Query: 85 PAPPLP-------ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLW 137
P +L L+ + E+ A + + ++ + + + L + + + + ++
Sbjct: 196 GNGANPFQYYLDADLKLTTKQAEEITARVLSLLSTTICTLRSLFLVEELKDSLKFLVIIY 255
Query: 138 LISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVKID 192
L+++VG + + +T+ ++ T P LY++++ +D Y L +K KI
Sbjct: 256 LLTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVDHYVSLVSKKGNAFRSKIQ 310
>sp|Q4FZ76|RTN2_XENLA Reticulon-2 OS=Xenopus laevis GN=rtn2 PE=2 SV=1
Length = 321
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 79/173 (45%), Gaps = 8/173 (4%)
Query: 26 DVILWRRKNVTVGILL-VTLAAWVVFERSGYTLLSLVSSVLLLLIAILFLWAKAAAILNR 84
D++ WR ++ G L VTL+ + + S ++ + ++L + L L+ K L R
Sbjct: 136 DLLYWRDTLLSTGCLTGVTLSLLCLSQFSVISVFAYGCLIILSVTLTLRLYTKLLHALKR 195
Query: 85 PAPPLP-------ELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNSRLFFRVALYLW 137
P +L L+ + E+ A + + L + + L + + + + ++
Sbjct: 196 GNGANPFQYYLDTDLKLTTKQAEEIVARAFSLASTTLCTLRSLFLVEELKDSLKFLVIVY 255
Query: 138 LISFVGGLTDFLTLGYTSLVIVLTLPALYERYEDHIDKYAILGYRKLRQLYVK 190
L+++VG + + +T+ ++ T P LY++++ +D Y L +K+ K
Sbjct: 256 LLTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVDHYVSLVSKKVNAFRSK 308
>sp|Q85BK9|YCF1B_ANTFO Putative protein ycf1 C-terminal part OS=Anthoceros formosae
GN=ycf1 PE=2 SV=1
Length = 473
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 121 ALGKNSRLFFRVALYLWLI-SFVGG----LTDFLTLGYTSLV 157
+LGK LFFR L LWL+ F+G T+F+ + Y SLV
Sbjct: 183 SLGKEKNLFFRSNLVLWLVPEFLGKKNIHKTEFIPVFYPSLV 224
>sp|Q3ZXV6|PNP_DEHSC Polyribonucleotide nucleotidyltransferase OS=Dehalococcoides sp.
(strain CBDB1) GN=pnp PE=3 SV=1
Length = 720
Score = 32.0 bits (71), Expect = 2.9, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 80 AILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNS 126
A L + P+P L + EE+ VAA ++ RVN+ LS QD +N+
Sbjct: 224 AKLGKEKLPVPVLEIPEEVKTAVAAFVKGRVNEALS-HQDKTARENA 269
>sp|A5FQT2|PNP_DEHSB Polyribonucleotide nucleotidyltransferase OS=Dehalococcoides sp.
(strain BAV1) GN=pnp PE=3 SV=1
Length = 720
Score = 32.0 bits (71), Expect = 2.9, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 80 AILNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGKNS 126
A L + P+P L + EE+ VAA ++ RVN+ LS QD +N+
Sbjct: 224 AKLGKEKLPVPVLEIPEEVKTAVAAFVKGRVNEALS-HQDKTARENA 269
>sp|Q8Z9E1|CUEO_SALTI Blue copper oxidase CueO OS=Salmonella typhi GN=cueO PE=3 SV=1
Length = 536
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 63 SVLLLLIAILFLWAKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDF 113
SV L + + L LW++AA RPA P+P+L L+ + N + +++ + F
Sbjct: 10 SVALGVASALPLWSRAAFAAERPALPIPDL-LTADASNRMQLIVKAGQSTF 59
>sp|Q8ZRS2|CUEO_SALTY Blue copper oxidase CueO OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=cueO PE=3 SV=1
Length = 536
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 63 SVLLLLIAILFLWAKAAAILNRPAPPLPELHLSEEMVNEVAALIRTRVNDF 113
SV L + + L LW++AA RPA P+P+L L+ + N + +++ + F
Sbjct: 10 SVALGVASALPLWSRAAFAAERPALPIPDL-LTADASNRMQLIVKAGQSTF 59
>sp|Q9L7R4|YIHO_SALTY Uncharacterized symporter YihO OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=yihO PE=3 SV=1
Length = 473
Score = 30.4 bits (67), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 25 ADVILWRRKNVTVGILLVTLAAWVV---FERSGYTLLSLVSSVLLLLIAILFLWAKAAAI 81
A + WR+ T+G+LL T+ + F RS +L L+++V+ + + +W + +
Sbjct: 152 AQLAAWRQGGATIGLLLCTVGFMPIQALFTRSP-SLGYLIAAVIFSVCGLFSMWWCFSGV 210
Query: 82 LNRPAPPLPELHLSEEMVNEVAALIRTRVNDFLSVSQDMALGK-NSRLFFRVALYLWLIS 140
R +P+ H ++ A+ R L V+ L N +L +V ++++
Sbjct: 211 KERYIETVPDTH-KPSILKSFCAIFRNPPLLVLCVANLCTLAAFNIKLAIQVYYTQYVLN 269
Query: 141 FVGGLT--DFLTLGYTSLVIVLTLPALYERY 169
+ L+ F ++G L+ VL +PA +R+
Sbjct: 270 DIHLLSWMGFFSMG-CILIGVLLVPAAVKRF 299
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,758,118
Number of Sequences: 539616
Number of extensions: 2575116
Number of successful extensions: 11437
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 11382
Number of HSP's gapped (non-prelim): 64
length of query: 210
length of database: 191,569,459
effective HSP length: 112
effective length of query: 98
effective length of database: 131,132,467
effective search space: 12850981766
effective search space used: 12850981766
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.9 bits)