BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028341
(210 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356505170|ref|XP_003521365.1| PREDICTED: uncharacterized protein LOC100816435 [Glycine max]
Length = 189
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 134/186 (72%), Gaps = 9/186 (4%)
Query: 11 VATTTDNAKASAEGNPKNNVGPMDLEQNPGADVNSSAVEVKKNGNDSKTAVTITAVSPVS 70
+ T TDN A+ NP + P + + P + +++A D+K + T+ P S
Sbjct: 1 MTTPTDNNNNPAQENPNKTLDPTEPDPIPATEDDAAA--------DTKDSDAKTSPPPDS 52
Query: 71 GDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKA 130
G+ ++D QKK+RRAERFG+ VQ+SE+EKRN+RAERFGTGS +QGSE SK SEELKRKA
Sbjct: 53 GNDAPLSDIQKKMRRAERFGISVQLSEKEKRNSRAERFGTGSASQGSEPSK-SEELKRKA 111
Query: 131 RAERFGLPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFSKTSSSSVSQVN 190
RAERFG+P P++ S+EEAK+KARLARFAP K D EEDKRKARALRF+ SS+S++ VN
Sbjct: 112 RAERFGMPSPTTTSDEEAKKKARLARFAPASKVDPQEEDKRKARALRFANPSSTSIANVN 171
Query: 191 GKGNIE 196
G+G IE
Sbjct: 172 GEGKIE 177
>gi|225439793|ref|XP_002276541.1| PREDICTED: uncharacterized protein LOC100249849 [Vitis vinifera]
Length = 218
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 52 KNGNDSKTAVTITAVSPVSG---DADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERF 108
K ++SK + A PV+ + V+D QKKIRRAERFGMPVQ+SEEEKRN+RAERF
Sbjct: 57 KEPDESKVGGSAGAADPVASSPTNTATVSDIQKKIRRAERFGMPVQLSEEEKRNSRAERF 116
Query: 109 GTGSKTQGSEVSKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARFAPYPKTDSVEE 168
GTG GS+ SK SEELKRKARAERFGLP+ S+ ++EE+K+KARLARFA KTD++EE
Sbjct: 117 GTGPTVHGSDGSKKSEELKRKARAERFGLPLDSAPTDEESKKKARLARFASVSKTDTLEE 176
Query: 169 DKRKARALRFSKTSSSSVSQVNGKGNIEVEAAAITGEADGVA 210
DK+KARA+RFS S S+SQVNGKG AI G+A G A
Sbjct: 177 DKKKARAIRFSNPPSDSLSQVNGKGEDIEPKTAIAGKASGGA 218
>gi|356572381|ref|XP_003554347.1| PREDICTED: uncharacterized protein LOC100791970 [Glycine max]
Length = 198
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
Query: 11 VATTTDNAKASAEGNPKNNVGPMDLEQNPGADVNSSAVEVKKNGNDSKTAVTITAVSPVS 70
+AT TDN A+ NP + P + + P + ++ A IT+ P S
Sbjct: 1 MATPTDNNNNPAQENPNKTLDPTEPDPIPATEDATATKGSDAKDPADADADAITSPPPDS 60
Query: 71 GDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKA 130
G+ ++D QKK+RRAERFG+ VQ+SE+EKRN+RAERFGT S +QGSE SK SE+LKRKA
Sbjct: 61 GNDAPLSDIQKKMRRAERFGISVQLSEKEKRNSRAERFGTVSASQGSEPSK-SEDLKRKA 119
Query: 131 RAERFGLPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFSKTSSSSVSQVN 190
RAERFG+P P++ ++EEAK+KARLARFAP K D EEDKRKARALRF+ SS+S++ VN
Sbjct: 120 RAERFGMPSPTTTADEEAKKKARLARFAPASKVDPQEEDKRKARALRFANPSSTSIANVN 179
Query: 191 GKGNIE 196
G+ IE
Sbjct: 180 GEAKIE 185
>gi|297741508|emb|CBI32640.3| unnamed protein product [Vitis vinifera]
Length = 120
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/120 (66%), Positives = 95/120 (79%)
Query: 91 MPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVPSSVSEEEAKR 150
MPVQ+SEEEKRN+RAERFGTG GS+ SK SEELKRKARAERFGLP+ S+ ++EE+K+
Sbjct: 1 MPVQLSEEEKRNSRAERFGTGPTVHGSDGSKKSEELKRKARAERFGLPLDSAPTDEESKK 60
Query: 151 KARLARFAPYPKTDSVEEDKRKARALRFSKTSSSSVSQVNGKGNIEVEAAAITGEADGVA 210
KARLARFA KTD++EEDK+KARA+RFS S S+SQVNGKG AI G+A G A
Sbjct: 61 KARLARFASVSKTDTLEEDKKKARAIRFSNPPSDSLSQVNGKGEDIEPKTAIAGKASGGA 120
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Query: 85 RAERFGMPVQMS---EEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVPS 141
RAERFG+P+ + EE K+ R RF + SKT T EE K+KARA RF P
Sbjct: 41 RAERFGLPLDSAPTDEESKKKARLARFASVSKTD------TLEEDKKKARAIRFSNPPSD 94
Query: 142 SVSE 145
S+S+
Sbjct: 95 SLSQ 98
>gi|449448693|ref|XP_004142100.1| PREDICTED: uncharacterized protein LOC101221301 [Cucumis sativus]
Length = 204
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 114/159 (71%), Gaps = 6/159 (3%)
Query: 52 KNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG 111
K G++SK A +A D V+D Q+K+RRAERFG+ VQ+SEEEKRN+RAERFG G
Sbjct: 52 KEGDESKCAGKPSA----EDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMG 107
Query: 112 SKTQGSEVSKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKR 171
+ T G S +EE+KRKARAERFGL S +++EAK+KARLARF+ K D EE+KR
Sbjct: 108 TTTNGLGASNKTEEVKRKARAERFGLSA-SVTTDDEAKKKARLARFSSTSKPDPQEEEKR 166
Query: 172 KARALRFSKTSSSSVSQVNGKGNIEVEAAAITGEADGVA 210
KARA+RFS + +S++QV+GKGN+E A + G++ G A
Sbjct: 167 KARAIRFSNPTPNSLTQVDGKGNVET-IADVAGKSGGGA 204
>gi|224069298|ref|XP_002326323.1| predicted protein [Populus trichocarpa]
gi|222833516|gb|EEE71993.1| predicted protein [Populus trichocarpa]
Length = 192
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/122 (67%), Positives = 99/122 (81%), Gaps = 3/122 (2%)
Query: 77 TDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVS--KTSEELKRKARAER 134
TDT KKIRRAERFG+ VQ+SE+EKRN+RAERFGTGS+ SE K SEELKRKARAER
Sbjct: 71 TDTDKKIRRAERFGITVQLSEKEKRNSRAERFGTGSQGPESESDSVKKSEELKRKARAER 130
Query: 135 FGLPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFSKTSSSSVSQVNGKGN 194
FG+PVP + + EE K+KAR R AP PK D++EE+KRKARALRFS++SS S +NGKG+
Sbjct: 131 FGIPVPPTATAEETKKKARHERLAPAPKIDALEENKRKARALRFSQSSSDS-LSMNGKGD 189
Query: 195 IE 196
+E
Sbjct: 190 LE 191
>gi|297810363|ref|XP_002873065.1| hypothetical protein ARALYDRAFT_487051 [Arabidopsis lyrata subsp.
lyrata]
gi|297318902|gb|EFH49324.1| hypothetical protein ARALYDRAFT_487051 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/143 (60%), Positives = 106/143 (74%), Gaps = 7/143 (4%)
Query: 70 SGDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGT--GSKTQGSEVSKTSEELK 127
SGD V D QKKIRRAERFG+ V+++EEEKRN+RAERFGT + GSE +K +EELK
Sbjct: 72 SGDISPVDDIQKKIRRAERFGVSVKLTEEEKRNSRAERFGTVAAAVVNGSEGTKKAEELK 131
Query: 128 RKARAERFGLPVPSSV---SEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFSKTSSS 184
RKARA+RFG+P ++ +EEEAK+KARLARF K DS EEDKRKARALRFSK +S+
Sbjct: 132 RKARADRFGVPAATTSTDNTEEEAKKKARLARFGKETKVDSAEEDKRKARALRFSKGASA 191
Query: 185 SV-SQVNGKGNIEVEAAAITGEA 206
S + GK NI E AA++G A
Sbjct: 192 DASSDLPGKQNIGKE-AAVSGNA 213
>gi|15241954|ref|NP_195897.1| uncharacterized protein [Arabidopsis thaliana]
gi|14190431|gb|AAK55696.1|AF378893_1 AT5g02770/F9G14_80 [Arabidopsis thaliana]
gi|7413552|emb|CAB86031.1| putative protein [Arabidopsis thaliana]
gi|15215889|gb|AAK91488.1| AT5g02770/F9G14_80 [Arabidopsis thaliana]
gi|62320777|dbj|BAD95440.1| putative protein [Arabidopsis thaliana]
gi|332003132|gb|AED90515.1| uncharacterized protein [Arabidopsis thaliana]
Length = 214
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 129/217 (59%), Gaps = 15/217 (6%)
Query: 1 MAADAEKLATVATTTDNAKASAEGNPKNNVGPMDLEQNPGADVNSSAVE------VKKNG 54
MA + EK+ AT + S NPK V E + D+ V+ KK
Sbjct: 1 MATNGEKV--TATVVNGGGLSTGENPKKIVDLNTTELDRTDDILDGEVKGFSDSGEKKEE 58
Query: 55 NDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGT--GS 112
DS + V SGD V D QKKIRRAERFG+ V+++EEEKRN+RAERFGT +
Sbjct: 59 TDSNGIGSTAGVD--SGDISPVDDIQKKIRRAERFGVSVKLTEEEKRNSRAERFGTVAAA 116
Query: 113 KTQGSEVSKTSEELKRKARAERFGLPVPSSV---SEEEAKRKARLARFAPYPKTDSVEED 169
GSE +K +EELKRKARA+RFG+P +S +EEEAK+KARLARF K DS EE+
Sbjct: 117 VVNGSEGTKKAEELKRKARADRFGVPSATSTTDKTEEEAKKKARLARFGKETKVDSAEEN 176
Query: 170 KRKARALRFSKTSSSSVSQVNGKGNIEVEAAAITGEA 206
KRKARALRFSK +S+ S + I + AA++G A
Sbjct: 177 KRKARALRFSKEASADASSDLPEKQIIGKEAAVSGSA 213
>gi|357510501|ref|XP_003625539.1| hypothetical protein MTR_7g100260 [Medicago truncatula]
gi|355500554|gb|AES81757.1| hypothetical protein MTR_7g100260 [Medicago truncatula]
Length = 196
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/126 (65%), Positives = 101/126 (80%), Gaps = 3/126 (2%)
Query: 72 DADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKAR 131
DA L +D QKK+RRAERFG+ V++SE+EKRN+RAERFGT S QG E K E+LKRKAR
Sbjct: 61 DAPL-SDVQKKMRRAERFGITVKLSEKEKRNSRAERFGTASVLQGPE-GKKDEDLKRKAR 118
Query: 132 AERFGLPVPSSVSEEEAKRKARLARF-APYPKTDSVEEDKRKARALRFSKTSSSSVSQVN 190
AERFG+P P+S ++++AK+KARLARF AP KTD EEDK+KARALRFS SS +SQVN
Sbjct: 119 AERFGMPTPTSAADDDAKKKARLARFAAPGSKTDPAEEDKKKARALRFSNASSKPLSQVN 178
Query: 191 GKGNIE 196
+ NIE
Sbjct: 179 SEANIE 184
>gi|224140141|ref|XP_002323443.1| predicted protein [Populus trichocarpa]
gi|222868073|gb|EEF05204.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 121/190 (63%), Gaps = 35/190 (18%)
Query: 11 VATTTDN-AKASAEGNPKNNVGPMDLEQ---NPGAD---VNSSAVEV-----KKNGNDSK 58
+AT TDN + A+ E NP + L+ + G D SS VE+ KK+ +SK
Sbjct: 1 MATKTDNPSTAAVEDNPSETLDTAVLDSTKPDRGEDSTNTASSTVELATEGPKKDSENSK 60
Query: 59 TAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKT---- 114
+A VTD +KKIRRAERFG+ VQ+SE+EKRN+RAERFGT + T
Sbjct: 61 SAAP-------------VTDIEKKIRRAERFGITVQLSEQEKRNSRAERFGTSTGTGTGT 107
Query: 115 ----QGSEVS--KTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARFAPYPKTDSVEE 168
QGSE K SEELKRKARAERFG+PVP + S+EEAK+K+RL +F P K++++E+
Sbjct: 108 GSTAQGSESDSVKKSEELKRKARAERFGIPVPPAASDEEAKKKSRLEKFTPAAKSNTLED 167
Query: 169 DKRKARALRF 178
DKRKARALR+
Sbjct: 168 DKRKARALRY 177
>gi|226496215|ref|NP_001143768.1| uncharacterized protein LOC100276530 [Zea mays]
gi|195626652|gb|ACG35156.1| hypothetical protein [Zea mays]
gi|238014316|gb|ACR38193.1| unknown [Zea mays]
gi|414866215|tpg|DAA44772.1| TPA: hypothetical protein ZEAMMB73_176371 [Zea mays]
gi|414866216|tpg|DAA44773.1| TPA: hypothetical protein ZEAMMB73_176371 [Zea mays]
Length = 169
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 94/129 (72%), Gaps = 8/129 (6%)
Query: 78 DTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
D +KK+RRAERFGMPV MSEEEKR++RAERFGTGS S EE K+K+RAERFGL
Sbjct: 49 DLEKKMRRAERFGMPVLMSEEEKRSSRAERFGTGS-------SSVKEEEKKKSRAERFGL 101
Query: 138 PVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFSKTSSSSVSQVNGKGNIEV 197
PSS S+EEAK+KARL RF D EE+KRKARA RF++ S S ++ NGK + +
Sbjct: 102 ASPSS-SDEEAKKKARLERFGQSANVDKAEEEKRKARAARFAEASGGSAARENGKDSSKP 160
Query: 198 EAAAITGEA 206
+AAA+TG A
Sbjct: 161 DAAAVTGTA 169
>gi|255568466|ref|XP_002525207.1| conserved hypothetical protein [Ricinus communis]
gi|223535504|gb|EEF37173.1| conserved hypothetical protein [Ricinus communis]
Length = 180
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 116/174 (66%), Gaps = 30/174 (17%)
Query: 35 LEQNPG--------ADVNSSAVEV----KKNGNDSKTAVTITAVSPVSGDADLVTDTQKK 82
LE NP + V S VEV K+ DSK+ + VSG+ V+DT+KK
Sbjct: 12 LEDNPSKALDAPIPSPVQSDLVEVTAPVNKDAEDSKS-------TKVSGNTAPVSDTEKK 64
Query: 83 IRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVPSS 142
IRRAERFG+ VQ+SE+EKRN+RAERFGTG K+ EELKRKARAERFGLPV S
Sbjct: 65 IRRAERFGITVQLSEQEKRNSRAERFGTGPTV------KSGEELKRKARAERFGLPVAVS 118
Query: 143 VSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFSKTSSSSVSQVNGKGNIE 196
++EEAK+KARL RFAP T EEDK KA+ +R S+ SS+S+S +NGKGN+E
Sbjct: 119 -ADEEAKKKARLQRFAP---TSKEEEDKEKAKDMRPSQPSSNSLS-MNGKGNVE 167
>gi|242041331|ref|XP_002468060.1| hypothetical protein SORBIDRAFT_01g038880 [Sorghum bicolor]
gi|241921914|gb|EER95058.1| hypothetical protein SORBIDRAFT_01g038880 [Sorghum bicolor]
Length = 170
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 92/129 (71%), Gaps = 9/129 (6%)
Query: 78 DTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
D +KK+RRAERFG PV MSEEEKR+ RAERFGTGS S EE K+K+RAERFGL
Sbjct: 51 DLEKKMRRAERFGTPVVMSEEEKRSNRAERFGTGS-------SSVKEEEKKKSRAERFGL 103
Query: 138 PVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFSKTSSSSVSQVNGKGNIEV 197
SS S+EEAK+KARL RF D EE+KRKARA RF TSS S +Q NGK + ++
Sbjct: 104 -ASSSSSDEEAKKKARLERFGQGTNVDKAEEEKRKARAARFGDTSSGS-AQENGKDSSKL 161
Query: 198 EAAAITGEA 206
+AAA+TG A
Sbjct: 162 DAAAVTGTA 170
>gi|108707535|gb|ABF95330.1| expressed protein [Oryza sativa Japonica Group]
Length = 175
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 93/130 (71%), Gaps = 9/130 (6%)
Query: 77 TDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFG 136
TD +KK+RRAERFG V MSEEEKR++RAERFGTGS + +EE KRK+RAERFG
Sbjct: 55 TDLEKKMRRAERFGTAVVMSEEEKRSSRAERFGTGSSNE------KAEEQKRKSRAERFG 108
Query: 137 LPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFSKTSSSSVSQVNGKGNIE 196
L SS ++E+AK+KARL RF D EE+KRKARALRF++TSS SQ NGK + +
Sbjct: 109 L--ASSSADEDAKKKARLERFGQSTNVDKGEEEKRKARALRFAETSSGP-SQENGKDSSK 165
Query: 197 VEAAAITGEA 206
+AA + G A
Sbjct: 166 PDAATVAGTA 175
Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 70 SGDADLVTDTQKKIRRAERFGMPVQMSEEE-KRNTRAERFGTGSKTQGSEVSKTSEELKR 128
+G ++ + QK+ RAERFG+ ++E+ K+ R ERFG Q + V K EE KR
Sbjct: 88 TGSSNEKAEEQKRKSRAERFGLASSSADEDAKKKARLERFG-----QSTNVDKGEEE-KR 141
Query: 129 KARAERF 135
KARA RF
Sbjct: 142 KARALRF 148
>gi|115452305|ref|NP_001049753.1| Os03g0283300 [Oryza sativa Japonica Group]
gi|24796814|gb|AAN64490.1| unknown protein [Oryza sativa Japonica Group]
gi|108707534|gb|ABF95329.1| expressed protein [Oryza sativa Japonica Group]
gi|113548224|dbj|BAF11667.1| Os03g0283300 [Oryza sativa Japonica Group]
Length = 177
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/116 (61%), Positives = 85/116 (73%), Gaps = 9/116 (7%)
Query: 77 TDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFG 136
TD +KK+RRAERFG V MSEEEKR++RAERFGTGS + +EE KRK+RAERFG
Sbjct: 55 TDLEKKMRRAERFGTAVVMSEEEKRSSRAERFGTGSSNE------KAEEQKRKSRAERFG 108
Query: 137 LPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFSKTSSSSVSQVNGK 192
L SS ++E+AK+KARL RF D EE+KRKARALRF++T SS SQ NGK
Sbjct: 109 L--ASSSADEDAKKKARLERFGQSTNVDKGEEEKRKARALRFAET-SSGPSQENGK 161
Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 70 SGDADLVTDTQKKIRRAERFGMPVQMSEEE-KRNTRAERFGTGSKTQGSEVSKTSEELKR 128
+G ++ + QK+ RAERFG+ ++E+ K+ R ERFG Q + V K EE KR
Sbjct: 88 TGSSNEKAEEQKRKSRAERFGLASSSADEDAKKKARLERFG-----QSTNVDKGEEE-KR 141
Query: 129 KARAERF 135
KARA RF
Sbjct: 142 KARALRF 148
>gi|125543382|gb|EAY89521.1| hypothetical protein OsI_11054 [Oryza sativa Indica Group]
gi|125585833|gb|EAZ26497.1| hypothetical protein OsJ_10389 [Oryza sativa Japonica Group]
Length = 178
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/116 (61%), Positives = 85/116 (73%), Gaps = 9/116 (7%)
Query: 77 TDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFG 136
TD +KK+RRAERFG V MSEEEKR++RAERFGTGS + +EE KRK+RAERFG
Sbjct: 55 TDLEKKMRRAERFGTAVVMSEEEKRSSRAERFGTGSSNE------KAEEQKRKSRAERFG 108
Query: 137 LPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFSKTSSSSVSQVNGK 192
L SS ++E+AK+KARL RF D EE+KRKARALRF++TSS SQ NGK
Sbjct: 109 LA--SSSADEDAKKKARLERFGQSTNVDKGEEEKRKARALRFAETSSGP-SQENGK 161
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 127 KRKARAERFGLPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFSKTSSSSV 186
K+ RAERFG V V EE KR +R RF + EE KRK+RA RF SSS+
Sbjct: 59 KKMRRAERFGTAV---VMSEEEKRSSRAERFGTGSSNEKAEEQKRKSRAERFGLASSSAD 115
Query: 187 SQVNGKGNIE 196
K +E
Sbjct: 116 EDAKKKARLE 125
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 70 SGDADLVTDTQKKIRRAERFGMPVQMSEEE-KRNTRAERFGTGSKTQGSEVSKTSEELKR 128
+G ++ + QK+ RAERFG+ ++E+ K+ R ERFG Q + V K EE KR
Sbjct: 88 TGSSNEKAEEQKRKSRAERFGLASSSADEDAKKKARLERFG-----QSTNVDKGEEE-KR 141
Query: 129 KARAERF 135
KARA RF
Sbjct: 142 KARALRF 148
>gi|449528665|ref|XP_004171324.1| PREDICTED: uncharacterized LOC101221301 [Cucumis sativus]
Length = 210
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 85/121 (70%), Gaps = 5/121 (4%)
Query: 52 KNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG 111
K G++SK A +A D V+D Q+K+RRAERFG+ VQ+SEEEKRN+RAERFG G
Sbjct: 52 KEGDESKCAGKPSA----EDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMG 107
Query: 112 SKTQGSEVSKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKR 171
+ T G S +EE+KRKARAERFGL S +++EAK+KARLARF+ K D EE+K
Sbjct: 108 TTTNGLGASNKTEEVKRKARAERFGLSA-SVTTDDEAKKKARLARFSSTSKPDPQEEEKG 166
Query: 172 K 172
K
Sbjct: 167 K 167
>gi|357112797|ref|XP_003558193.1| PREDICTED: uncharacterized protein LOC100842684 [Brachypodium
distachyon]
Length = 177
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 88/132 (66%), Gaps = 10/132 (7%)
Query: 77 TDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFG 136
TD +KK+RRAERFG V MSEEEKR++RAERFGT S + EE K+K+RAERFG
Sbjct: 54 TDLEKKMRRAERFGTQVVMSEEEKRSSRAERFGTVSSNE------KMEEQKKKSRAERFG 107
Query: 137 LPVPSSVSEEEAKRKARLARFAPYPKTD--SVEEDKRKARALRFSKTSSSSVSQVNGKGN 194
+ SS EAK+KARL RF P T+ EEDKRKARALRF++T S S S+ N K
Sbjct: 108 I-TSSSTDANEAKKKARLERFGPNTNTNVSKAEEDKRKARALRFAETPSGS-SEGNDKDT 165
Query: 195 IEVEAAAITGEA 206
+ +AA + G A
Sbjct: 166 SKPDAATVAGTA 177
>gi|326488275|dbj|BAJ93806.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 174
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 86/130 (66%), Gaps = 8/130 (6%)
Query: 77 TDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFG 136
TD +KK+RRAERFG V MSE+EKR++RAERFGTGS + EE K+K+RAERFG
Sbjct: 53 TDLEKKMRRAERFGTQVVMSEDEKRSSRAERFGTGSSNE------KMEEQKKKSRAERFG 106
Query: 137 LPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFSKTSSSSVSQVNGKGNIE 196
LP PSS EAK+KARL RF + EE+KRKARALRF+ S S S+ K +
Sbjct: 107 LPTPSS-DNTEAKKKARLERFGQSTEVGKAEEEKRKARALRFAGAPSGS-SEGKDKDTSK 164
Query: 197 VEAAAITGEA 206
+AA + G A
Sbjct: 165 PDAATVAGTA 174
>gi|326506760|dbj|BAJ91421.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 174
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 86/130 (66%), Gaps = 8/130 (6%)
Query: 77 TDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFG 136
TD +KK+RRAERFG V MSE+EKR++RAERFGTGS + EE K+K+RAERFG
Sbjct: 53 TDLEKKMRRAERFGTQVVMSEDEKRSSRAERFGTGSSNE------KMEEQKKKSRAERFG 106
Query: 137 LPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFSKTSSSSVSQVNGKGNIE 196
LP PSS EAK+KARL RF + EE+KRKA+ALRF+ S S S+ K +
Sbjct: 107 LPTPSS-DNTEAKKKARLERFGQSTEVGKAEEEKRKAQALRFAGAPSGS-SEGKDKDTSK 164
Query: 197 VEAAAITGEA 206
+AA + G A
Sbjct: 165 PDAATVAGTA 174
>gi|195653321|gb|ACG46128.1| hypothetical protein [Zea mays]
Length = 166
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 53/73 (72%), Gaps = 7/73 (9%)
Query: 78 DTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
D +KK+RRAERFGMPV MSEEEKR++RAERFGTGS S EE K+ +RAERFGL
Sbjct: 49 DLEKKMRRAERFGMPVLMSEEEKRSSRAERFGTGS-------SSVKEEEKKXSRAERFGL 101
Query: 138 PVPSSVSEEEAKR 150
PSS EE KR
Sbjct: 102 ASPSSSDEEXKKR 114
>gi|357510503|ref|XP_003625540.1| hypothetical protein MTR_7g100260 [Medicago truncatula]
gi|355500555|gb|AES81758.1| hypothetical protein MTR_7g100260 [Medicago truncatula]
Length = 130
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%), Gaps = 2/66 (3%)
Query: 72 DADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKAR 131
DA L +D QKK+RRAERFG+ V++SE+EKRN+RAERFGT S QG E K E+LKRKAR
Sbjct: 61 DAPL-SDVQKKMRRAERFGITVKLSEKEKRNSRAERFGTASVLQGPE-GKKDEDLKRKAR 118
Query: 132 AERFGL 137
AER+ +
Sbjct: 119 AERYSI 124
>gi|168035511|ref|XP_001770253.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678470|gb|EDQ64928.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 195
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 63/118 (53%), Gaps = 35/118 (29%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKT------QGSEVSKT------- 122
+TD +KK +RAERFG ++++E +KR RA RF GSK G EV KT
Sbjct: 74 MTDIEKKRKRAERFGTDLRITEADKRKLRAARFSGGSKNGAVAGEAGVEVEKTGSVKAPS 133
Query: 123 -----SEELKRKARAERFGLP---------VPSSV--------SEEEAKRKARLARFA 158
+E KRKARAERFG P P SV +EEAK+KAR+ARFA
Sbjct: 134 KALLEAENAKRKARAERFGGPPEEVTVKPKSPQSVVAAKPKLAQDEEAKKKARMARFA 191
>gi|302812257|ref|XP_002987816.1| hypothetical protein SELMODRAFT_447133 [Selaginella moellendorffii]
gi|300144435|gb|EFJ11119.1| hypothetical protein SELMODRAFT_447133 [Selaginella moellendorffii]
Length = 299
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 67/120 (55%), Gaps = 10/120 (8%)
Query: 41 ADVNSSAVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEK 100
AD NS +NG + V + + P+S D +KK RRAERFG+ + SE+EK
Sbjct: 59 ADGNSRDGVSVENGGKEEGVVCLESPGPLS-------DMEKKQRRAERFGVGLNFSEDEK 111
Query: 101 RNTRAERFGTGSK--TQGSEVSKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARFA 158
R RA RF K ++VS SE K+ ARA RFG +S + E+AK++ARL RF+
Sbjct: 112 RKLRASRFNASDKKGVSKAKVSIESETEKKNARAARFGTANVASAN-EDAKKRARLDRFS 170
>gi|302817469|ref|XP_002990410.1| hypothetical protein SELMODRAFT_448028 [Selaginella moellendorffii]
gi|300141795|gb|EFJ08503.1| hypothetical protein SELMODRAFT_448028 [Selaginella moellendorffii]
Length = 301
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 67/120 (55%), Gaps = 10/120 (8%)
Query: 41 ADVNSSAVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEK 100
AD NS +NG + V + + P+S D +KK RRAERFG+ + SE+EK
Sbjct: 62 ADGNSRDGVSVENGGKEEGVVCLESPGPLS-------DMEKKQRRAERFGVGLNFSEDEK 114
Query: 101 RNTRAERFGTGSK--TQGSEVSKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARFA 158
R RA RF K ++VS SE K+ ARA RFG +S + E+AK++ARL RF+
Sbjct: 115 RKLRASRFNASDKKGVSKAKVSIESETEKKNARAARFGTANVASAN-EDAKKRARLDRFS 173
>gi|449483361|ref|XP_004156567.1| PREDICTED: uncharacterized protein LOC101224163 [Cucumis sativus]
Length = 120
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRK 129
V D KKIRRAERFG+PV++SE EKR +RAERFG S E++K +EELKRK
Sbjct: 67 VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDSVCGPDEMAK-AEELKRK 119
>gi|449440045|ref|XP_004137795.1| PREDICTED: uncharacterized protein LOC101210991 [Cucumis sativus]
Length = 120
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRK 129
V D KKIRRAERFG+PV++SE EKR +RAERFG S E++K +EELKRK
Sbjct: 67 VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDSVCGPDEMAK-AEELKRK 119
>gi|403344599|gb|EJY71647.1| hypothetical protein OXYTRI_07365 [Oxytricha trifallax]
Length = 261
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 14/99 (14%)
Query: 70 SGDADLVT---------DTQKKIRRAERFGMPVQMSEEEKRNTRAERFG--TGSKTQGSE 118
+GD L T + +K++ RA++FG+ +EE+KR RA +FG + S G++
Sbjct: 148 TGDTHLTTADALQSQKEEQEKRLARAQKFGLNTSETEEQKRQERAVKFGLISASAVTGAK 207
Query: 119 VSKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARF 157
SK + KRK RA+RFGL ++ +EE KR RL RF
Sbjct: 208 PSKQEMDEKRKERAQRFGL---TTADDEEEKRLKRLERF 243
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 16/107 (14%)
Query: 89 FGMPVQMSEEEKRNTRAERFGTGSK---TQGSEVSKTSEELKRKARAERFGLPVPSSVSE 145
G ++S EK+ R +RF TG T + S+ E+ KR ARA++FGL +
Sbjct: 127 IGDVAELSIREKKELRKQRFKTGDTHLTTADALQSQKEEQEKRLARAQKFGLNTSET--- 183
Query: 146 EEAKRKARLARFAPY---------PKTDSVEEDKRKARALRFSKTSS 183
EE KR+ R +F P ++E KRK RA RF T++
Sbjct: 184 EEQKRQERAVKFGLISASAVTGAKPSKQEMDE-KRKERAQRFGLTTA 229
>gi|403335780|gb|EJY67073.1| hypothetical protein OXYTRI_12632 [Oxytricha trifallax]
Length = 261
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 14/99 (14%)
Query: 70 SGDADLVT---------DTQKKIRRAERFGMPVQMSEEEKRNTRAERFG--TGSKTQGSE 118
+GD L T + +K++ RA++FG+ +EE+KR RA +FG + S G++
Sbjct: 148 TGDTHLTTADALQSQKEEQEKRLARAQKFGLNTSETEEQKRQERAVKFGLISASAVTGAK 207
Query: 119 VSKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARF 157
SK + KRK RA+RFGL ++ +EE KR RL RF
Sbjct: 208 PSKQEMDEKRKERAQRFGL---TTADDEEEKRLKRLERF 243
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 16/107 (14%)
Query: 89 FGMPVQMSEEEKRNTRAERFGTGSK---TQGSEVSKTSEELKRKARAERFGLPVPSSVSE 145
G ++S EK+ R +RF TG T + S+ E+ KR ARA++FGL +
Sbjct: 127 IGDVAELSLREKKELRKQRFKTGDTHLTTADALQSQKEEQEKRLARAQKFGLNTSET--- 183
Query: 146 EEAKRKARLARFAPY---------PKTDSVEEDKRKARALRFSKTSS 183
EE KR+ R +F P ++E KRK RA RF T++
Sbjct: 184 EEQKRQERAVKFGLISASAVTGAKPSKQEMDE-KRKERAQRFGLTTA 229
>gi|156405896|ref|XP_001640967.1| predicted protein [Nematostella vectensis]
gi|156228104|gb|EDO48904.1| predicted protein [Nematostella vectensis]
Length = 460
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 18/149 (12%)
Query: 53 NGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS 112
NG + K+++T ++ S ++ ++K++R +RFG PV SE +++ RAERFG
Sbjct: 115 NGKEKKSSITAAKLTVNSA----ASENERKLQRMKRFGGPV--SENDRKLARAERFGINL 168
Query: 113 KTQGSE-VSKTS-------EELKRKARAERFGL--PVPSSVSEEE--AKRKARLARFAPY 160
K G + V+ TS + K K RAERFG+ P S++ E+E KRK R
Sbjct: 169 KETGKQDVNTTSTTQATPIDVNKLKKRAERFGVVSPAVSNIVEKEKLLKRKERFGVTTVA 228
Query: 161 PKTDSVEEDKRKARALRFSKTSSSSVSQV 189
T E K+K RA RFS SSS+ +
Sbjct: 229 AATADPLEIKKKKRAERFSNRKSSSLKNL 257
>gi|237836545|ref|XP_002367570.1| mitochondrial carrier domain-containing protein [Toxoplasma gondii
ME49]
gi|211965234|gb|EEB00430.1| mitochondrial carrier domain-containing protein [Toxoplasma gondii
ME49]
gi|221505277|gb|EEE30931.1| SAP domain-containing protein [Toxoplasma gondii VEG]
Length = 279
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 51/103 (49%), Gaps = 27/103 (26%)
Query: 77 TDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG------SKTQGSEVSK--------- 121
TD +KK+ RA RFG+ V EEEK+ RAERFG+ S Q V K
Sbjct: 164 TDDEKKLDRARRFGLSVPELEEEKKRLRAERFGSASGAAKTSSIQSLPVDKLEEERRRKR 223
Query: 122 ------TSEELKRKARAERFGLPVPSSVSEEEAKRKARLARFA 158
SEE K++ RAERFG V+ EE K RL RF+
Sbjct: 224 AERFGIVSEEEKKRKRAERFG------VTSEEEKLAKRLQRFS 260
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 50/115 (43%), Gaps = 41/115 (35%)
Query: 95 MSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVPSSVSEEEAKRKARL 154
M+EEE+R R +FGT KT +E K+ RA RFGL VP EE K++ R
Sbjct: 147 MTEEERRALRKAKFGT----------KTDDE-KKLDRARRFGLSVPEL---EEEKKRLRA 192
Query: 155 ARFAP---YPKTDSV------------------------EEDKRKARALRFSKTS 182
RF KT S+ EE+K++ RA RF TS
Sbjct: 193 ERFGSASGAAKTSSIQSLPVDKLEEERRRKRAERFGIVSEEEKKRKRAERFGVTS 247
>gi|221484003|gb|EEE22307.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 279
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 51/103 (49%), Gaps = 27/103 (26%)
Query: 77 TDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG------SKTQGSEVSK--------- 121
TD +KK+ RA RFG+ V EEEK+ RAERFG+ S Q V K
Sbjct: 164 TDDEKKLDRARRFGLSVPELEEEKKRLRAERFGSASGAAKTSSIQSLPVDKLEEERRRKR 223
Query: 122 ------TSEELKRKARAERFGLPVPSSVSEEEAKRKARLARFA 158
SEE K++ RAERFG V+ EE K RL RF+
Sbjct: 224 AERFGIVSEEEKKRKRAERFG------VTSEEEKLAKRLQRFS 260
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 50/115 (43%), Gaps = 41/115 (35%)
Query: 95 MSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVPSSVSEEEAKRKARL 154
M+EEE+R R +FGT KT +E K+ RA RFGL VP EE K++ R
Sbjct: 147 MTEEERRALRKAKFGT----------KTDDE-KKLDRARRFGLSVPEL---EEEKKRLRA 192
Query: 155 ARFAP---YPKTDSV------------------------EEDKRKARALRFSKTS 182
RF KT S+ EE+K++ RA RF TS
Sbjct: 193 ERFGSASGAAKTSSIQSLPVDKLEEERRRKRAERFGIVSEEEKKRKRAERFGVTS 247
>gi|401405997|ref|XP_003882448.1| putative mitochondrial carrier domain-containing protein [Neospora
caninum Liverpool]
gi|325116863|emb|CBZ52416.1| putative mitochondrial carrier domain-containing protein [Neospora
caninum Liverpool]
Length = 281
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 49/101 (48%), Gaps = 26/101 (25%)
Query: 77 TDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSK--------------- 121
TD +KK+ RA RFG+ V EEEK+ RAERFG+ + S +
Sbjct: 167 TDDEKKLDRARRFGLSVPELEEEKKRLRAERFGSAPAAKTSSIESLPVDKLEEERRRKRA 226
Query: 122 -----TSEELKRKARAERFGLPVPSSVSEEEAKRKARLARF 157
SEE K++ RAERFG V+ EE K RL RF
Sbjct: 227 ERFGIVSEEDKKRKRAERFG------VTTEEEKLAKRLQRF 261
Score = 43.1 bits (100), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 52/114 (45%), Gaps = 40/114 (35%)
Query: 95 MSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVPSSVSEEEAKRKARL 154
M+EEE+R R +FGT KT +E K+ RA RFGL VP EE K++ R
Sbjct: 150 MTEEERRALRKAKFGT----------KTDDE-KKLDRARRFGLSVPEL---EEEKKRLRA 195
Query: 155 ARF--APYPKTDSV------------------------EEDKRKARALRFSKTS 182
RF AP KT S+ EEDK++ RA RF T+
Sbjct: 196 ERFGSAPAAKTSSIESLPVDKLEEERRRKRAERFGIVSEEDKKRKRAERFGVTT 249
>gi|384251264|gb|EIE24742.1| hypothetical protein COCSUDRAFT_65502 [Coccomyxa subellipsoidea
C-169]
Length = 238
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 15/95 (15%)
Query: 78 DTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG-----SKTQGSEVSKTS-----EEL- 126
+ +K+ RA RFG+P+ SE++K++ RA+RFG K + SE +S EEL
Sbjct: 102 ELEKRKARAARFGVPLNTSEDKKKDLRAQRFGIAENAAPEKRKASEPIVSSKAASEEELA 161
Query: 127 ----KRKARAERFGLPVPSSVSEEEAKRKARLARF 157
K+KARA RF +P+ ++ EE+ + KAR RF
Sbjct: 162 ALLEKKKARAARFNVPLVTTGKEEQVRLKARAERF 196
>gi|414866217|tpg|DAA44774.1| TPA: hypothetical protein ZEAMMB73_176371 [Zea mays]
Length = 78
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 28/30 (93%)
Query: 78 DTQKKIRRAERFGMPVQMSEEEKRNTRAER 107
D +KK+RRAERFGMPV MSEEEKR++RAER
Sbjct: 49 DLEKKMRRAERFGMPVLMSEEEKRSSRAER 78
>gi|307104107|gb|EFN52362.1| hypothetical protein CHLNCDRAFT_138782 [Chlorella variabilis]
Length = 248
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 64/133 (48%), Gaps = 35/133 (26%)
Query: 76 VTDTQKKIRRAERFGMPV----------------------QMSEE-EKRNTRAERFGTGS 112
+T+ +K RA RFGMPV M EE ++R RAERFG
Sbjct: 116 LTEAEKARLRAARFGMPVVADKKKEGGGGGESVIGGLGQVDMKEEIDRRKKRAERFGMPV 175
Query: 113 KTQGSEVSKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARFAPYP-----KTDSVE 167
V K E+LK+K RAERFGL VP S E EAK+K R RF P K+ E
Sbjct: 176 -----PVLKEEEDLKKKQRAERFGLKVPLSKEEFEAKKKERAERFGGGPAAEAMKSGMTE 230
Query: 168 EDKRKA--RALRF 178
E K+K RA RF
Sbjct: 231 EHKKKLEERAKRF 243
>gi|380006441|gb|AFD29611.1| CIP29 [Schmidtea mediterranea]
Length = 261
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 24/116 (20%)
Query: 77 TDTQKKIRRAERFGMPVQMS------EEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKA 130
T+ KK+ RA+RFG+ V S + EK R ERFG + ++SK ++E K+
Sbjct: 154 TEENKKLARAQRFGLDVSKSNGDVTVDIEKLKKREERFGV---SVSDKLSKAADEEKKLK 210
Query: 131 RAERFGLPVPSSVSEE--------EAKRKARLARFAPYPKTDSVEEDKRKARALRF 178
RAERFG V +S+ E + K+ R ARF + +E+K+KARA RF
Sbjct: 211 RAERFG--VQTSIQVESVGGVNLNDDKKAVRAARFGL-----NTDEEKKKARAARF 259
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 80 QKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPV 139
+KK RA RFG+ +EE K+ RA+RFG +V+ E+LK+ R ERFG+ V
Sbjct: 138 KKKQDRAARFGIITNDTEENKKLARAQRFGLDVSKSNGDVTVDIEKLKK--REERFGVSV 195
Query: 140 PSSVSE--EEAKRKARLARFAPYPKTD-------SVEEDKRKARALRF 178
+S+ +E K+ R RF ++ +DK+ RA RF
Sbjct: 196 SDKLSKAADEEKKLKRAERFGVQTSIQVESVGGVNLNDDKKAVRAARF 243
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 20/68 (29%)
Query: 78 DTQKKIRRAERFGMPVQMSEE---------EKRNTRAERFGTGSKTQGSEVSKTSEELKR 128
D +KK++RAERFG+ + E +K+ RA RFG ++E K+
Sbjct: 204 DEEKKLKRAERFGVQTSIQVESVGGVNLNDDKKAVRAARFGL-----------NTDEEKK 252
Query: 129 KARAERFG 136
KARA RFG
Sbjct: 253 KARAARFG 260
>gi|326428387|gb|EGD73957.1| hypothetical protein PTSG_05651 [Salpingoeca sp. ATCC 50818]
Length = 265
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 77 TDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFG 136
T +K++ RA+RFG+ + +++KR RAERFG K S + KR RA+RFG
Sbjct: 144 TKKEKRLERAKRFGLETKEIKQDKRKQRAERFGLAGKGGSSPAVSAEAQQKRLDRAKRFG 203
Query: 137 LPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFSKTSSSSVSQVN 190
L V + + + +K+ Y E +K K R RF+ +++ Q+N
Sbjct: 204 LDVMTKTEQNKKAKKSPATNKKNYAAMSVEELEKMKKRIARFN-PDDTALEQIN 256
>gi|341899103|gb|EGT55038.1| hypothetical protein CAEBREN_19328 [Caenorhabditis brenneri]
Length = 252
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 19/146 (13%)
Query: 43 VNSSAVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV---QMSEEE 99
V++++VE K + + +TA S A K RA+RFG+P +++ E+
Sbjct: 119 VDNASVEKDKRARAIRFGLPVTAEQLASDGA--------KAARAQRFGLPEDANRLASED 170
Query: 100 KRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVPSS---VSEEEAKRKARLAR 156
++ RA RFG + K ++ K+ ARA RFGLPV S + ++AK AR R
Sbjct: 171 AKSKRAARFGITTPA----TDKNDQDEKKAARAARFGLPVGGSNGGSNAKDAKLAARAKR 226
Query: 157 FAPYPKTDSVEEDKRKARALRFSKTS 182
F + D +E K+KAR RF S
Sbjct: 227 FGGAVEDDEMEA-KKKARLERFGPGS 251
>gi|62858179|ref|NP_001016484.1| SAP domain containing ribonucleoprotein [Xenopus (Silurana)
tropicalis]
gi|89272930|emb|CAJ83241.1| novel proteinn (ortholog of human cytokine induced protein 29 kDa
CIP29) [Xenopus (Silurana) tropicalis]
gi|111308007|gb|AAI21713.1| RIKEN cDNA 1110005A23 gene [Xenopus (Silurana) tropicalis]
gi|166796604|gb|AAI58969.1| RIKEN cDNA 1110005A23 gene [Xenopus (Silurana) tropicalis]
Length = 207
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 77 TDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEEL---KRKARAE 133
++T K +RAERF +P S + K+ RA RFG + + E+S + K K RA+
Sbjct: 97 SETDKLQKRAERFNVPA--SVDSKKAARAIRFGLSTSDKKGEISDAKSPVSMDKLKERAQ 154
Query: 134 RFGLPVP--SSVSEEEAKRKARLARFAPYPKTDSVEED---KRKARALRF 178
RFGL V S SE++ K K R RF + SV +D K++ RA RF
Sbjct: 155 RFGLSVSPVSKKSEDDEKLKKRKERFGIVTSSASVTDDTEAKKRKRAERF 204
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 41/78 (52%), Gaps = 16/78 (20%)
Query: 65 AVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKRNTRAERFGTGSKTQGSEV 119
A SPVS D K RA+RFG+ V + ++EK R ERFG T + V
Sbjct: 140 AKSPVSMD--------KLKERAQRFGLSVSPVSKKSEDDEKLKKRKERFGIV--TSSASV 189
Query: 120 SKTSEELKRKARAERFGL 137
+ +E KRK RAERFG+
Sbjct: 190 TDDTEAKKRK-RAERFGI 206
>gi|390362363|ref|XP_797144.3| PREDICTED: uncharacterized protein LOC592534, partial
[Strongylocentrotus purpuratus]
Length = 457
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-------------KTQGSEVSKT 122
+TDT+KK RA++FG+ +S+ +K+ RAERFG + ++G VS
Sbjct: 128 MTDTEKKALRAQKFGVAGSLSDADKKKARAERFGMKAPESKDKPTAAATPTSKGISVSVD 187
Query: 123 SEELKRKARAERFG----LPVPSSVSEEEAKRKARLARF 157
+++LK+ RAERFG P P+ EE + + R RF
Sbjct: 188 TDKLKQ--RAERFGKSVSPPAPAIKGEEAERIRKRKERF 224
>gi|384485714|gb|EIE77894.1| hypothetical protein RO3G_02598 [Rhizopus delemar RA 99-880]
Length = 267
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 63/140 (45%), Gaps = 32/140 (22%)
Query: 62 TITAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSK 121
T V PV + +D +K I RA+RFG VQ+++ K++ RA+RFG K E K
Sbjct: 128 TQKPVIPVVPQKAVSSDAEKAIERAKRFG--VQLNDSAKKDLRAQRFGVPKKVNNEEALK 185
Query: 122 TSEELKRKARAERFGLPVPSSVSEEEAKR----------------KARLARFA-----PY 160
RAERFGL + E KR K R RF
Sbjct: 186 K--------RAERFGLNKGGNDPEILKKRAEKFGTNKGGIDPEVLKKRAERFGLNNGNKV 237
Query: 161 P-KTDSVEEDKRKARALRFS 179
P K D+ EE+K++ RA RFS
Sbjct: 238 PVKFDAAEEEKKRKRAERFS 257
>gi|443720671|gb|ELU10322.1| hypothetical protein CAPTEDRAFT_176678 [Capitella teleta]
Length = 251
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 62/126 (49%), Gaps = 23/126 (18%)
Query: 75 LVTDTQKKIRRAERFGMPVQMSEE--------EKRNTRAERFGTGSK---TQGSEVSKTS 123
+V DT KK RA RFG+ ++E EK RAERFG +K + +E T
Sbjct: 124 VVADTDKKSARAARFGITDSAAKENKATGPDAEKLKKRAERFGIPAKEETVKKTEADNTK 183
Query: 124 EELKRKARAERFGLPVPSSVSEEEAKRK--ARLARF---------APYPKTDSVEEDKRK 172
+ K RAERFG S++S+EEAK K R ARF A +D E KRK
Sbjct: 184 DISALKKRAERFGAVTSSTLSKEEAKEKFLKRKARFGIETDAKVGAKADASDEASEKKRK 243
Query: 173 ARALRF 178
RA RF
Sbjct: 244 -RAERF 248
>gi|357623080|gb|EHJ74378.1| hypothetical protein KGM_03622 [Danaus plexippus]
Length = 264
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 13/86 (15%)
Query: 85 RAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKT---------SEEL-KRKARAER 134
RA+RFG+PV+M++E+++ R +RF S + +E SK S+ L K K RAER
Sbjct: 177 RAKRFGLPVKMTDEQRKEARKQRFNQNSNSVNTE-SKVITTVDNPSLSDNLDKLKQRAER 235
Query: 135 FGLPVPSSVSEEEAKRKA--RLARFA 158
FG V + +++ E K K R A+F+
Sbjct: 236 FGQSVSAIMTDIENKEKLEKRKAKFS 261
>gi|148235683|ref|NP_001088507.1| uncharacterized protein LOC495376 [Xenopus laevis]
gi|54311324|gb|AAH84843.1| LOC495376 protein [Xenopus laevis]
Length = 208
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS---KTQGSEVSKTSEELKRKARA 132
V++T + +RAERF +P S K+ +RA RFG + K Q S+V + K K RA
Sbjct: 97 VSETDRLQKRAERFNVPA--SANTKKASRAIRFGISTSEKKDQISDVKSSVSMDKLKERA 154
Query: 133 ERFGLPVP--SSVSEEEAKRKARLARFAPYPK----TDSVEEDKRKARALRF 178
+RFGL V S +E++ K K R RF TD +E KRK RA RF
Sbjct: 155 QRFGLSVSPVSKKNEDDEKLKKRKERFGIVTSSATVTDDIEAKKRK-RAGRF 205
>gi|325191218|emb|CCA26005.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 293
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 14/78 (17%)
Query: 81 KKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVP 140
++ +RAERFG+ + E K+ RAERFG EE +R RAERFG+ P
Sbjct: 221 RQAKRAERFGIITADTLEAKKQERAERFGLN-----------VEEKRRLHRAERFGIDTP 269
Query: 141 SSVSEEEAKRKARLARFA 158
++ + K++ RL RFA
Sbjct: 270 ETL---QVKKQRRLERFA 284
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 27/148 (18%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKT-------QGSEVSKTS----- 123
+T+ +K+ RAE+FG+ V + +K+ RA+RF G+ T + E+S +
Sbjct: 157 ITEEEKRKLRAEKFGIEVSLG--DKKALRAKRFKIGTATGTPEPLSKAEEISSKALDTAS 214
Query: 124 ---EELKRKARAERFGLPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFSK 180
E+L++ RAERFG+ ++ EAK++ R RF +VEE +R RA RF
Sbjct: 215 TEEEKLRQAKRAERFGIITADTL---EAKKQERAERFGL-----NVEEKRRLHRAERFGI 266
Query: 181 TSSSSVSQVNGKGNIEVEAAAITGEADG 208
+ ++ QV + +E A I +A G
Sbjct: 267 DTPETL-QVKKQRRLE-RFAGIVNQATG 292
>gi|302830582|ref|XP_002946857.1| hypothetical protein VOLCADRAFT_103091 [Volvox carteri f.
nagariensis]
gi|300267901|gb|EFJ52083.1| hypothetical protein VOLCADRAFT_103091 [Volvox carteri f.
nagariensis]
Length = 259
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 14/83 (16%)
Query: 78 DTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
D ++K +RA+RF + E+EK RAERFG T+ E+ E++K++ RA RFG
Sbjct: 158 DMERKKQRAQRFNLIDADLEKEKMMKRAERFG----TKHPEL----EQIKKEQRAARFG- 208
Query: 138 PVPSSVSEEEAKRKARLARFAPY 160
+ +EE K+K RL +F P
Sbjct: 209 -----IVDEETKKKQRLEKFKPL 226
Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 13/64 (20%)
Query: 72 DADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKAR 131
DADL + +K ++RAERFG E+ K+ RA RFG EE K+K R
Sbjct: 173 DADL--EKEKMMKRAERFGTKHPELEQIKKEQRAARFGI-----------VDEETKKKQR 219
Query: 132 AERF 135
E+F
Sbjct: 220 LEKF 223
>gi|221054516|ref|XP_002258397.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193808466|emb|CAQ39169.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 306
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 15/94 (15%)
Query: 93 VQMSEEEKRNTRAERFGTGSKTQGSE--------VSKTSEELKRKARAERFGLPVPSSVS 144
+ ++EE+KR R +RFG SK E V++ E+ RK RAERFGL ++
Sbjct: 217 LYLTEEKKRELRKKRFGVVSKDDVLESRAKRFCIVTQKMEKENRKKRAERFGLST-GKLN 275
Query: 145 EEEAKRKARLARFAPYPKTDSVEEDKRKARALRF 178
E KRK R RF ++D +E ARALRF
Sbjct: 276 NSEMKRK-RAERFGLVQESDKLE-----ARALRF 303
Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 40/75 (53%), Gaps = 15/75 (20%)
Query: 85 RAERFGMPVQMSEEEKRNTRAERFGTGS-KTQGSEVSKTSEELKRKARAERFGLPVPSSV 143
RA+RF + Q E+E R RAERFG + K S E+KRK RAERFGL
Sbjct: 244 RAKRFCIVTQKMEKENRKKRAERFGLSTGKLNNS-------EMKRK-RAERFGL------ 289
Query: 144 SEEEAKRKARLARFA 158
+E K +AR RF
Sbjct: 290 VQESDKLEARALRFG 304
>gi|313244012|emb|CBY14882.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 6/56 (10%)
Query: 81 KKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFG 136
KKI RAERFG+ + E+K+ +RAERFG + +E +KT E K++ARAERFG
Sbjct: 102 KKISRAERFGIEAEEIVEKKKMSRAERFGLPA----AEKAKTDE--KKRARAERFG 151
>gi|345329382|ref|XP_001506355.2| PREDICTED: SAP domain-containing ribonucleoprotein-like, partial
[Ornithorhynchus anatinus]
Length = 201
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 61/117 (52%), Gaps = 18/117 (15%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFG---TGSKTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG +K ++V T K K RA
Sbjct: 86 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGITPVSAKALSTDVKPTVNMDKLKERA 143
Query: 133 ERFGLPVPSSVS---EEEAKRKARLARF--------APYPKTDSVEEDKRKARALRF 178
+RFGL V SSVS E++ K K R RF A T+ E KRK RA RF
Sbjct: 144 QRFGLNV-SSVSKKTEDDEKLKKRKERFGIVTSSVGATAGATEDTEAKKRK-RAERF 198
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ +T + +S D + K RA+RFG+ V + ++EK
Sbjct: 104 SLESKKAARAARFGITPVSAKALSTDVKPTVNMDKLKERAQRFGLNVSSVSKKTEDDEKL 163
Query: 102 NTRAERFGTGSKTQGSEVSKTSE-ELKRKARAERFGL 137
R ERFG + + G+ T + E K++ RAERFG+
Sbjct: 164 KKRKERFGIVTSSVGATAGATEDTEAKKRKRAERFGI 200
>gi|156097256|ref|XP_001614661.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803535|gb|EDL44934.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 335
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 19/122 (15%)
Query: 57 SKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQG 116
+K + +SP D +T+ +K+ R +RFG+ +S +E +RA+RF
Sbjct: 230 TKNTLQKNIISPPE-DNLYLTEEKKRELRKKRFGV---VSTDEVLESRAKRFCI------ 279
Query: 117 SEVSKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARAL 176
V++ EE ++ RAERFGL +++ E KRK R RF E DK KARAL
Sbjct: 280 --VTQKMEEENKRKRAERFGLN-KGKLNDSEMKRK-RAERFGLVK-----ESDKLKARAL 330
Query: 177 RF 178
RF
Sbjct: 331 RF 332
>gi|321449242|gb|EFX61794.1| hypothetical protein DAPPUDRAFT_230026 [Daphnia pulex]
gi|321457222|gb|EFX68313.1| hypothetical protein DAPPUDRAFT_301489 [Daphnia pulex]
Length = 265
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 8/64 (12%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEE--EKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAE 133
V D K ++R RFG+ + E EK+ RAERFGT S GS S+E KRK RAE
Sbjct: 207 VPDNDKLLKRQARFGVVSNSNSEVDEKKQKRAERFGTTSTAVGS-----SDEQKRK-RAE 260
Query: 134 RFGL 137
RFGL
Sbjct: 261 RFGL 264
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 85 RAERFGMPVQMSEEEKRNTRAERFG----TGSKTQGSEVSKTSEELKRKARAERFGLPVP 140
RA++FG+P+ S K+ RAERFG T S T +V + LKR+AR FG+ V
Sbjct: 171 RAQKFGVPIPDSV--KKAVRAERFGGTNSTESNTSKPQVPDNDKLLKRQAR---FGV-VS 224
Query: 141 SSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRF 178
+S SE + K++ R RF +++++ RA RF
Sbjct: 225 NSNSEVDEKKQKRAERFGTTSTAVGSSDEQKRKRAERF 262
>gi|147899023|ref|NP_001091420.1| SAP domain containing ribonucleoprotein [Xenopus laevis]
gi|126632061|gb|AAI33774.1| LOC100049111 protein [Xenopus laevis]
Length = 208
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 12/112 (10%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS---KTQGSEVSKTSEELKRKARA 132
+++T K +RAERF +P S + K+ RA RFG + K Q S+V + K K RA
Sbjct: 97 LSETDKLQKRAERFNVPA--SADTKKAARAIRFGISTSDKKGQISDVKSSVSMDKLKERA 154
Query: 133 ERFGLPVP--SSVSEEEAKRKARLARFAPYPK----TDSVEEDKRKARALRF 178
+RFGL V S +E++ K K R RF TD E KRK R+ RF
Sbjct: 155 QRFGLSVSPVSKKNEDDEKLKKRKERFGIVTSSASGTDDTEAKKRK-RSERF 205
>gi|301120826|ref|XP_002908140.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262103171|gb|EEY61223.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 217
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 12/85 (14%)
Query: 73 ADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARA 132
A++ ++ K+++RAERF + + E+K++ RAERFG +EE +R RA
Sbjct: 140 AEVEEESAKRLKRAERFHLETTNAFEKKKDARAERFGLN-----------AEEKRRLDRA 188
Query: 133 ERFGLPVPSSVSEEEAKRKARLARF 157
+RFGL S V E KR+ R+ RF
Sbjct: 189 KRFGLET-SEVVRFEEKRRKRMERF 212
>gi|312078736|ref|XP_003141868.1| hypothetical protein LOAG_06284 [Loa loa]
gi|307762969|gb|EFO22203.1| hypothetical protein LOAG_06284 [Loa loa]
Length = 250
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 75 LVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAER 134
++ K++RA+RFG+P + +E+ + RAERFG S +E K+K RAER
Sbjct: 120 MINSLDAKLKRAQRFGLP--LCDEQMKQKRAERFGMQLSADASIGEILTE--KKKKRAER 175
Query: 135 FGLPVPSSVSEEEAKRKARLARFAPYPKTDSV 166
FG+ + +E R+A+ RF ++++V
Sbjct: 176 FGIVSETEKMQEILDRRAK--RFGIDNESNAV 205
>gi|308474874|ref|XP_003099657.1| hypothetical protein CRE_22972 [Caenorhabditis remanei]
gi|308266512|gb|EFP10465.1| hypothetical protein CRE_22972 [Caenorhabditis remanei]
Length = 247
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 15/118 (12%)
Query: 68 PVSGDADLVTDTQKKIRRAERFGMP---VQMSEEEKRNTRAERFGTGSKTQGSEVSKTSE 124
PV+ A+LV K RA+RF +P ++ +E + RAERFG + T+ +E +
Sbjct: 134 PVT--AELVGSDSAKAARAKRFDLPEDAKRLGSDEAKAKRAERFGLQNDTKSAE-----K 186
Query: 125 ELKRKARAERFGLPVPSS----VSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRF 178
+ K ARA RFGLPV + ++AK R RF + VE K+KAR RF
Sbjct: 187 DDKLAARAARFGLPVGGASGGGAKTKDAKLAERAKRFGGGVDDEEVEA-KKKARLERF 243
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 58 KTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPVQ---MSEEEKRNTRAERFGT--GS 112
K V + PV D+ T + K RA RFG+PV + + + RA+RF +
Sbjct: 104 KKEVVVLVDKPV----DVETVEKAKRERAIRFGLPVTAELVGSDSAKAARAKRFDLPEDA 159
Query: 113 KTQGSEVSKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARF 157
K GS+ +K RAERFGL + +E++ K AR ARF
Sbjct: 160 KRLGSDEAKAK-------RAERFGLQNDTKSAEKDDKLAARAARF 197
>gi|296005199|ref|XP_002808931.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|225631817|emb|CAX64212.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 288
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 36/154 (23%)
Query: 27 KNNVGPMDLEQNPGADVN---SSAVEVKKNGND----SKTAVTITAVSPVSGDADLVTDT 79
KNN G D + NP D N S V + ND S+ + +S D+ L +
Sbjct: 146 KNN-GTNDHKNNPNKDSNDQKSKIVIQEITFNDVSSSSQNTLQRNIISTDDNDSYLSEEK 204
Query: 80 QKKIRR---------------AERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSE 124
++++RR A+RF + EEE + RAERFG V K ++
Sbjct: 205 KRELRRKRFGVVNTDDALESRAKRFSIVTHKMEEENKRKRAERFGLN-------VVKMND 257
Query: 125 ELKRKARAERFGLPVPSSVSEEEAKRKARLARFA 158
K+K RAERFGL ++ K KAR RF
Sbjct: 258 FEKKKKRAERFGLL------QDSEKLKARALRFG 285
>gi|327276976|ref|XP_003223242.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 1
[Anolis carolinensis]
Length = 213
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 61/107 (57%), Gaps = 16/107 (14%)
Query: 84 RRAERFGMPVQMSEEEKRNTRAERFGTG-SKTQG-SEVSKTSEEL-KRKARAERFGLPVP 140
+RAERF +PV + E K+ RA RFG + T+G E SKT+ + K K RA+RFGL V
Sbjct: 108 KRAERFNVPVSL--ESKKAARAARFGMSVASTKGLGEESKTTVNIDKLKERAQRFGLNV- 164
Query: 141 SSVS---EEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
S+VS E++ K K R RF A T+ E KRK RA RF
Sbjct: 165 STVSKKTEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 210
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ +++ + + ++ + K RA+RFG+ V + ++EK
Sbjct: 118 SLESKKAARAARFGMSVASTKGLGEESKTTVNIDKLKERAQRFGLNVSTVSKKTEDDEKL 177
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 178 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 212
>gi|355564335|gb|EHH20835.1| Nuclear protein Hcc-1 [Macaca mulatta]
Length = 210
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS---KTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S K + +E+ K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGKSTEILLKVNLDKPKERA 154
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 155 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 85 RAERFGMPV-----QMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
RA+RFG+ V + ++EK R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 153 RAQRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 209
>gi|225709204|gb|ACO10448.1| Nuclear protein Hcc-1 [Caligus rogercresseyi]
Length = 253
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 20/110 (18%)
Query: 81 KKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL--- 137
KK RA RFG+P + K R+ERFG + S V K + K K R ERFG+
Sbjct: 147 KKAARAARFGLPP--PDMNKLKQRSERFG---QVNSSAVKKMEDAEKIKKRQERFGVVTA 201
Query: 138 -------PVPSSVSE--EEAKRKARLARFAPYPKTDSVEEDKRKARALRF 178
VP +V + EE KR+ R RF + D ++K+K R+LRF
Sbjct: 202 ASQKGSKAVPKAVLDPAEEEKRRKRAERFGLNKEED---DEKKKIRSLRF 248
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 46/92 (50%), Gaps = 16/92 (17%)
Query: 78 DTQKKIRRAERFGMP-----VQMSEEEKRNTRAERFGT-------GSKTQGSEVSKTSEE 125
D K +R+ERFG +M + EK R ERFG GSK V +EE
Sbjct: 161 DMNKLKQRSERFGQVNSSAVKKMEDAEKIKKRQERFGVVTAASQKGSKAVPKAVLDPAEE 220
Query: 126 LKRKARAERFGLPVPSSVSEEEAKRKARLARF 157
KR+ RAERFGL + E++ K+K R RF
Sbjct: 221 EKRRKRAERFGL----NKEEDDEKKKIRSLRF 248
>gi|340369202|ref|XP_003383137.1| PREDICTED: SAP domain-containing ribonucleoprotein-like [Amphimedon
queenslandica]
Length = 246
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERF 135
++D + +R ERFG V + K+ RAERFGT +G + K K RA+RF
Sbjct: 140 LSDNDRLKKRGERFG--VTDNAMAKKLKRAERFGTVLGKRGGAQLPAEDVEKMKKRAQRF 197
Query: 136 ----GLPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRF 178
G P+ + + + E K+K+R ARF TD ED++ RA RF
Sbjct: 198 GSAGGSPIINQLEDNE-KKKSRAARF-NLSATDLATEDRKANRAERF 242
>gi|395540542|ref|XP_003772212.1| PREDICTED: SAP domain-containing ribonucleoprotein [Sarcophilus
harrisii]
Length = 210
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 60/115 (52%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEEL---KRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S + S T + K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVSAKGLSSDTKPMVNMDKLKERA 154
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SSV SE++ K K R RF A T+ E KRK RA RF
Sbjct: 155 QRFGLNV-SSVSKKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ + +S D + + K RA+RFG+ V + ++EK
Sbjct: 115 SLESKKAARAARFGISSVSAKGLSSDTKPMVNMDKLKERAQRFGLNVSSVSKKSEDDEKL 174
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 175 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 209
>gi|395835494|ref|XP_003790713.1| PREDICTED: SAP domain-containing ribonucleoprotein [Otolemur
garnettii]
Length = 224
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 62/114 (54%), Gaps = 15/114 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG-SEVSKTSEELKRKARAE 133
+ T++ +RAERF +PV + E K+ RA RFG S T+G S + T K K RA+
Sbjct: 112 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSETNTVNLDKLKERAQ 169
Query: 134 RFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 170 RFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 221
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 85 RAERFGMPV-----QMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
RA+RFG+ V + ++EK R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 167 RAQRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 223
>gi|350535314|ref|NP_001232664.1| putative cytokine induced protein [Taeniopygia guttata]
gi|197127630|gb|ACH44128.1| putative cytokine induced protein [Taeniopygia guttata]
Length = 207
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 66 VSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQGSEV-SKTS 123
V +S D ++ ++ +RAERF +PV + E K+ RA RFG + T+G SK +
Sbjct: 90 VVKISSD---ISQMERMQKRAERFNVPVSL--ESKKAARAARFGLATIPTKGLAADSKPT 144
Query: 124 EEL-KRKARAERFGLPVPS--SVSEEEAKRKARLARFAPYPKTDSVE--EDKRKARALRF 178
L K K RA+RFGL V S SEE+ K K R RF + + E K++ RA RF
Sbjct: 145 LNLEKLKERAQRFGLNVSSLSRKSEEDEKLKKRKERFGIVTGAGAADDSEAKKRKRAERF 204
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ + ++ D+ + +K RA+RFG+ V + E+EK
Sbjct: 115 SLESKKAARAARFGLATIPTKGLAADSKPTLNLEKLKERAQRFGLNVSSLSRKSEEDEKL 174
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG G+ + SE KRK RAERFG+
Sbjct: 175 KKRKERFGI---VTGAGAADDSEAKKRK-RAERFGI 206
>gi|71896967|ref|NP_001026495.1| SAP domain-containing ribonucleoprotein [Gallus gallus]
gi|326924688|ref|XP_003208557.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 1
[Meleagris gallopavo]
gi|53128942|emb|CAG31348.1| hypothetical protein RCJMB04_5e24 [Gallus gallus]
gi|60098519|emb|CAH65090.1| hypothetical protein RCJMB04_3i4 [Gallus gallus]
Length = 210
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 14/114 (12%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG-SEVSKTSEEL-KRKARA 132
++ ++ +RAERF +PV + E K+ RA RFG + T+G S SK + + K K RA
Sbjct: 97 ISQMERMQKRAERFNVPVSL--ESKKAARAARFGLATVSTKGLSADSKPTVNMDKLKERA 154
Query: 133 ERFGLPVP--SSVSEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V S SEE+ K K R RF A T+ E KRK RA RF
Sbjct: 155 QRFGLNVSSLSKKSEEDEKLKKRKERFGIVTSSAGAGATEDTEAKKRK-RAERF 207
Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ + + +S D+ + K RA+RFG+ V + E+EK
Sbjct: 115 SLESKKAARAARFGLATVSTKGLSADSKPTVNMDKLKERAQRFGLNVSSLSKKSEEDEKL 174
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 175 KKRKERFGIVTSSAGAGATEDTEAKKRK-RAERFGI 209
>gi|348580513|ref|XP_003476023.1| PREDICTED: SAP domain-containing ribonucleoprotein-like [Cavia
porcellus]
Length = 210
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 76/168 (45%), Gaps = 34/168 (20%)
Query: 23 EGNPKNNVGPMDLEQNPGADVNSSAVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKK 82
E PK P+ E+ P V+ +A K V IT+ P T++
Sbjct: 62 EEEPKPIELPVKEEEPPEKTVDVAA---------EKKVVKITSEMP---------QTERM 103
Query: 83 IRRAERFGMPVQMSEEEKRNTRAERFGTGS---KTQGSEVSKTSEELKRKARAERFGLPV 139
+RAERF +PV + E K+ RA RFG S K S+ K K RA+RFGL V
Sbjct: 104 QKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERAQRFGLNV 161
Query: 140 PSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 162 -SSISRKSEDDEKLKKRKERFGIVTSSAGIGTTEDTEAKKRK-RAERF 207
Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 115 SLESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 174
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G ++ +E KRK RAERFG+
Sbjct: 175 KKRKERFGIVTSSAGIGTTEDTEAKKRK-RAERFGI 209
>gi|348539250|ref|XP_003457102.1| PREDICTED: SAP domain-containing ribonucleoprotein-like
[Oreochromis niloticus]
Length = 210
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 59/112 (52%), Gaps = 19/112 (16%)
Query: 84 RRAERFGMPVQMSEEEKRNTRAERFG---TGSKTQG----SEVSKTSEELKRKARAERFG 136
+RAERF +P S E K+ RA RFG T S + G S+ + ++LK+ RAERFG
Sbjct: 104 KRAERFNLPA--SSESKKAIRAARFGLPATSSPSPGVVVNSKAAVNVDQLKK--RAERFG 159
Query: 137 LPVPSSVS---EEEAKRKARLARFAPYPKTDSVEED----KRKARALRFSKT 181
+ V SS+S EE+ K K R RF SV D K+ RA RF K
Sbjct: 160 MNV-SSISQKIEEDEKLKKRKERFGVPTSAGSVGADDIEAKKMKRAERFGKV 210
>gi|226482382|emb|CAX73790.1| DNA-binding SAP,domain-containing protein [Schistosoma japonicum]
Length = 281
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 33/116 (28%)
Query: 75 LVTDTQKKIRRAERFGMPV----------QMSEEEKRNTRAERFG-TGSKTQ-------- 115
TD +K + RA+RFG+P+ + E EK RAERFG T SKT
Sbjct: 159 FTTDEEKSLARAKRFGLPINSHNINTATSKSDELEKLKRRAERFGQTTSKTLEMINDLER 218
Query: 116 --------GSEVS-----KTSEELKRKARAERFGLPVPSSVSEEEAKRKA-RLARF 157
G+ VS ++EL + RA++FGL + S+ S +A++ + R ARF
Sbjct: 219 KAKRLEKFGTPVSSSGKIHLNDELAKSIRAQKFGLVLSSNDSLSDAEKLSRRQARF 274
>gi|290462115|gb|ADD24105.1| SAP domain-containing ribonucleoprotein [Lepeophtheirus salmonis]
Length = 264
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 31/121 (25%)
Query: 77 TDTQKKIRRAERFGM-----PVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKAR 131
TD QK +R A RFG+ PV M +K R+ERFG + S + K + + K R
Sbjct: 151 TDDQKSVR-AARFGIEEASTPVDM---DKLKQRSERFG---QVNSSAIKKMEDAERIKKR 203
Query: 132 AERFG-----LPV---------PSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALR 177
ERFG PV P++ + K K R RF P + V+E K+K R++R
Sbjct: 204 QERFGVVTAEFPVKKISTGVLDPAN----DEKLKKRAERFGAVPSSSDVDE-KKKLRSMR 258
Query: 178 F 178
F
Sbjct: 259 F 259
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 16/152 (10%)
Query: 16 DNAKASAEGNPKNNVGPMDLEQNPGADVNSSAVEVKKNGNDSKTAVTITAVSPVSGDADL 75
DN K S +P ++ M+ E A S +E + +D K+ + A +A
Sbjct: 114 DNQKESTSASPTDHT-KMNDEDKSNARKERSGIETPSSTDDQKS---VRAARFGIEEAST 169
Query: 76 VTDTQKKIRRAERFGM-----PVQMSEEEKRNTRAERFGTGS-----KTQGSEVSKTSEE 125
D K +R+ERFG +M + E+ R ERFG + K + V + +
Sbjct: 170 PVDMDKLKQRSERFGQVNSSAIKKMEDAERIKKRQERFGVVTAEFPVKKISTGVLDPAND 229
Query: 126 LKRKARAERFGLPVPSSVSEEEAKRKARLARF 157
K K RAERFG VPSS S+ + K+K R RF
Sbjct: 230 EKLKKRAERFG-AVPSS-SDVDEKKKLRSMRF 259
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 120 SKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFS 179
+K ++E K AR ER G+ PSS ++++ R ARF + V+ DK K R+ RF
Sbjct: 128 TKMNDEDKSNARKERSGIETPSSTDDQKS---VRAARFGIEEASTPVDMDKLKQRSERFG 184
Query: 180 KTSSSSVSQV 189
+ +SS++ ++
Sbjct: 185 QVNSSAIKKM 194
Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 21/135 (15%)
Query: 64 TAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTS 123
T+ SP D + D K R ER G+ S +++++ RA RFG E S
Sbjct: 120 TSASPT--DHTKMNDEDKSNARKERSGIETPSSTDDQKSVRAARFGI------EEASTPV 171
Query: 124 EELKRKARAERFGLPVPSSVSE-EEAKR-KARLARF----APYPK-------TDSVEEDK 170
+ K K R+ERFG S++ + E+A+R K R RF A +P D ++K
Sbjct: 172 DMDKLKQRSERFGQVNSSAIKKMEDAERIKKRQERFGVVTAEFPVKKISTGVLDPANDEK 231
Query: 171 RKARALRFSKTSSSS 185
K RA RF SSS
Sbjct: 232 LKKRAERFGAVPSSS 246
>gi|354488191|ref|XP_003506254.1| PREDICTED: SAP domain-containing ribonucleoprotein-like [Cricetulus
griseus]
Length = 231
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS---KTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S K S+ K K RA
Sbjct: 118 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERA 175
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 176 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 228
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 136 SLESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 195
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 196 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 230
>gi|226467774|emb|CAX69763.1| DNA-binding SAP,domain-containing protein [Schistosoma japonicum]
Length = 281
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 33/116 (28%)
Query: 75 LVTDTQKKIRRAERFGMPV----------QMSEEEKRNTRAERFG-TGSKTQ-------- 115
TD +K + RA+RFG+P+ + E EK RAERFG T SKT
Sbjct: 159 FTTDEEKSLARAKRFGLPINSHNINTATSKSDELEKLKRRAERFGQTTSKTLEMINDLER 218
Query: 116 --------GSEVS-----KTSEELKRKARAERFGLPVPSSVSEEEA-KRKARLARF 157
G+ VS ++EL + RA++FGL + S+ S +A K R ARF
Sbjct: 219 KAKRLEKFGTPVSSSGKIHLNDELAKSIRAQKFGLVLSSNDSLSDAGKLSRRQARF 274
>gi|440886961|gb|ELR44515.1| SAP domain-containing ribonucleoprotein, partial [Bos grunniens
mutus]
Length = 175
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG SK S+ K K RA
Sbjct: 62 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISPVPSKGLSSDTKPMVNLDKLKERA 119
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 120 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 172
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 11/82 (13%)
Query: 66 VSPV-----SGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKRNTRAERFGTGSKTQ 115
+SPV S D + + K RA+RFG+ V + ++EK R ERFG + +
Sbjct: 94 ISPVPSKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSA 153
Query: 116 GSEVSKTSEELKRKARAERFGL 137
G+ ++ +E KRK RAERFG+
Sbjct: 154 GTGTTEDTEAKKRK-RAERFGI 174
>gi|13384730|ref|NP_079640.1| SAP domain-containing ribonucleoprotein [Mus musculus]
gi|18202843|sp|Q9D1J3.3|SARNP_MOUSE RecName: Full=SAP domain-containing ribonucleoprotein; AltName:
Full=Nuclear protein Hcc-1
gi|12834134|dbj|BAB22799.1| unnamed protein product [Mus musculus]
gi|20380578|gb|AAH27510.1| RIKEN cDNA 1110005A23 gene [Mus musculus]
gi|26353232|dbj|BAC40246.1| unnamed protein product [Mus musculus]
gi|74226724|dbj|BAE27010.1| unnamed protein product [Mus musculus]
gi|148692682|gb|EDL24629.1| mCG18674, isoform CRA_c [Mus musculus]
gi|148709659|gb|EDL41605.1| mCG113697 [Mus musculus]
gi|187956892|gb|AAI58024.1| RIKEN cDNA 1110005A23 gene [Mus musculus]
gi|187957432|gb|AAI57910.1| RIKEN cDNA 1110005A23 gene [Mus musculus]
Length = 210
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS---KTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S K S+ K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERA 154
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 155 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 115 SLESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 174
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 175 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 209
>gi|170591528|ref|XP_001900522.1| SAP domain containing protein [Brugia malayi]
gi|158592134|gb|EDP30736.1| SAP domain containing protein [Brugia malayi]
Length = 249
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 75 LVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAER 134
++ K++RA+RFG+P +S+E+ + RAERFG + +E K+K RA R
Sbjct: 120 MINSFDAKLKRAQRFGLP--LSDEQMKQKRAERFGMQLGVDANIGEILAE--KKKKRAAR 175
Query: 135 FGLPVPSSVSEEEAKRKARLARFAPYPKTDSV 166
FG+ + +E ++AR RF K+ +V
Sbjct: 176 FGVVSETEKMQEILNKRAR--RFGGVNKSSAV 205
>gi|111120339|ref|NP_001036119.1| SAP domain-containing ribonucleoprotein [Bos taurus]
gi|426224999|ref|XP_004006656.1| PREDICTED: SAP domain-containing ribonucleoprotein [Ovis aries]
gi|83638639|gb|AAI09533.1| Cytokine induced protein 29 kDa [Bos taurus]
gi|296487459|tpg|DAA29572.1| TPA: cytokine induced protein 29 kDa [Bos taurus]
Length = 210
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG SK S+ K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISPVPSKGLSSDTKPMVNLDKLKERA 154
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 155 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 11/82 (13%)
Query: 66 VSPV-----SGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKRNTRAERFGTGSKTQ 115
+SPV S D + + K RA+RFG+ V + ++EK R ERFG + +
Sbjct: 129 ISPVPSKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSA 188
Query: 116 GSEVSKTSEELKRKARAERFGL 137
G+ ++ +E KRK RAERFG+
Sbjct: 189 GTGTTEDTEAKKRK-RAERFGI 209
>gi|148692680|gb|EDL24627.1| mCG18674, isoform CRA_a [Mus musculus]
Length = 208
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS---KTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S K S+ K K RA
Sbjct: 95 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERA 152
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 153 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 205
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 113 SLESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 172
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 173 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 207
>gi|297262627|ref|XP_001111427.2| PREDICTED: dnaJ homolog subfamily C member 14-like isoform 2
[Macaca mulatta]
Length = 895
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 63/115 (54%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG-SEVSKTSEEL-KRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S T+G S +K L K K RA
Sbjct: 782 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 839
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 840 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 892
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 800 SLESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 859
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 860 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 894
>gi|219521752|gb|AAI72063.1| 1110005A23Rik protein [Mus musculus]
Length = 209
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS---KTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S K S+ K K RA
Sbjct: 96 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERA 153
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 154 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 206
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 114 SLESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 173
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 174 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 208
>gi|119617245|gb|EAW96839.1| hCG2016179, isoform CRA_f [Homo sapiens]
Length = 893
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 63/115 (54%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG-SEVSKTSEEL-KRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S T+G S +K L K K RA
Sbjct: 780 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 837
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 838 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 890
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 798 SLESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 857
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 858 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 892
>gi|432117546|gb|ELK37787.1| SAP domain-containing ribonucleoprotein [Myotis davidii]
Length = 229
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS---KTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S K S+ K K RA
Sbjct: 116 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPLKGLSSDTKPMVNLDKLKERA 173
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 174 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 226
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ + +S D + + K RA+RFG+ V + ++EK
Sbjct: 134 SLESKKAARAARFGISSVPLKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 193
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 194 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 228
>gi|403297071|ref|XP_003939412.1| PREDICTED: dnaJ homolog subfamily C member 14 [Saimiri boliviensis
boliviensis]
Length = 994
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG-SEVSKTSEEL-KRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S T+G S +K L K K RA
Sbjct: 886 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 943
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARFA 158
+RFGL V SS+ SE++ K K R RF
Sbjct: 944 QRFGLNV-SSISRKSEDDEKLKKRKERFG 971
>gi|311255630|ref|XP_003126304.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 1
[Sus scrofa]
gi|335288106|ref|XP_003355522.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 3
[Sus scrofa]
Length = 210
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 76/168 (45%), Gaps = 34/168 (20%)
Query: 23 EGNPKNNVGPMDLEQNPGADVNSSAVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKK 82
E PK P+ E+ P V+ +A K V IT+ P T++
Sbjct: 62 EEEPKPIELPVKEEEPPEKTVDVAA---------EKKVVKITSEMP---------QTERM 103
Query: 83 IRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEELKRKARAERFGLPV 139
+RAERF +PV + E K+ RA RFG SK S+ K K RA+RFGL V
Sbjct: 104 QKRAERFNVPVSL--ESKKAARAARFGISSVPSKGLSSDTKPMVNLDKLKERAQRFGLNV 161
Query: 140 PSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 162 -SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 115 SLESKKAARAARFGISSVPSKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 174
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 175 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 209
>gi|74271863|ref|NP_001028242.1| SAP domain-containing ribonucleoprotein [Rattus norvegicus]
gi|84029305|sp|Q498U4.3|SARNP_RAT RecName: Full=SAP domain-containing ribonucleoprotein; AltName:
Full=Nuclear protein Hcc-1
gi|71680097|gb|AAI00071.1| Cytokine induced protein 29 kDa [Rattus norvegicus]
gi|149029621|gb|EDL84792.1| similar to RIKEN cDNA 1110005A23, isoform CRA_b [Rattus norvegicus]
gi|149029625|gb|EDL84796.1| similar to RIKEN cDNA 1110005A23, isoform CRA_b [Rattus norvegicus]
Length = 210
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS---KTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S K S+ K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERA 154
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 155 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 115 SLESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 174
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 175 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 209
>gi|328909551|gb|AEB61443.1| SAP domain-containing ribonucleoprotein-like protein, partial
[Equus caballus]
Length = 215
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG SK S+ K K RA
Sbjct: 102 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPSKGLSSDTKPMVNLDKLKERA 159
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 160 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 212
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 120 SLESKKAARAARFGISSVPSKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 179
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 180 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 214
>gi|149029623|gb|EDL84794.1| similar to RIKEN cDNA 1110005A23, isoform CRA_d [Rattus norvegicus]
Length = 205
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS---KTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S K S+ K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERA 154
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF 157
+RFGL V SS+ SE++ K K R RF
Sbjct: 155 QRFGLNV-SSISRKSEDDEKLKKRKERF 181
>gi|268570659|ref|XP_002640802.1| Hypothetical protein CBG15683 [Caenorhabditis briggsae]
Length = 251
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 82 KIRRAERFGM--PVQMSEE--EKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
K RRAERFG+ P +E EK RA RFG +V +++ K RA+RFG
Sbjct: 169 KARRAERFGIQSPATAKQEKDEKLAARAARFGLPVGGASPKVGGATKDAKLAERAKRFGG 228
Query: 138 PVPSSVSEEEAKRKARLARF 157
V +E EAK+KARL RF
Sbjct: 229 AVDD--AEMEAKKKARLERF 246
>gi|149756744|ref|XP_001504830.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 1
[Equus caballus]
gi|338726363|ref|XP_003365305.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 2
[Equus caballus]
gi|335775158|gb|AEH58478.1| SAP domain-containing ribonucleoprotein-like protein [Equus
caballus]
Length = 210
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG SK S+ K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPSKGLSSDTKPMVNLDKLKERA 154
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 155 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207
Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 115 SLESKKAARAARFGISSVPSKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 174
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 175 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 209
>gi|149029620|gb|EDL84791.1| similar to RIKEN cDNA 1110005A23, isoform CRA_a [Rattus norvegicus]
gi|149029624|gb|EDL84795.1| similar to RIKEN cDNA 1110005A23, isoform CRA_a [Rattus norvegicus]
Length = 127
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS---KTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S K S+ K K RA
Sbjct: 14 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERA 71
Query: 133 ERFGLPVP--SSVSEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V S SE++ K K R RF A T+ E KRK RA RF
Sbjct: 72 QRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 124
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 32 SLESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 91
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 92 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 126
>gi|301789895|ref|XP_002930364.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 1
[Ailuropoda melanoleuca]
Length = 210
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG SK S+ K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSGPSKGLSSDAKPMVNLDKLKERA 154
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 155 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 69 VSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKRNTRAERFGTGSKTQGSEVSKTS 123
+S DA + + K RA+RFG+ V + ++EK R ERFG + + G+ ++ +
Sbjct: 137 LSSDAKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDT 196
Query: 124 EELKRKARAERFGL 137
E KRK RAERFG+
Sbjct: 197 EAKKRK-RAERFGI 209
>gi|62901848|gb|AAY18875.1| HCC-1 [synthetic construct]
Length = 234
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 63/115 (54%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG-SEVSKTSEEL-KRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S T+G S +K L K K RA
Sbjct: 121 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 178
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 179 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 231
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 139 SLESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 198
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 199 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 233
>gi|12858661|dbj|BAB31400.1| unnamed protein product [Mus musculus]
Length = 197
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS---KTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S K S+ K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERA 154
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF 157
+RFGL V SS+ SE++ K K R RF
Sbjct: 155 QRFGLNV-SSISRKSEDDEKLKKRKERF 181
>gi|397472200|ref|XP_003807643.1| PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog subfamily C member 14
[Pan paniscus]
Length = 1059
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG-SEVSKTSEEL-KRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S T+G S +K L K K RA
Sbjct: 951 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 1008
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARFA 158
+RFGL V SS+ SE++ K K R RF
Sbjct: 1009 QRFGLNV-SSISRKSEDDEKLKKRKERFG 1036
>gi|149029622|gb|EDL84793.1| similar to RIKEN cDNA 1110005A23, isoform CRA_c [Rattus norvegicus]
Length = 122
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS---KTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S K S+ K K RA
Sbjct: 14 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERA 71
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF 157
+RFGL V SS+ SE++ K K R RF
Sbjct: 72 QRFGLNV-SSISRKSEDDEKLKKRKERF 98
>gi|226372456|gb|ACO51853.1| Nuclear protein Hcc-1 [Rana catesbeiana]
Length = 210
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 84 RRAERFGMPVQMSEEEKRNTRAERFG---TGSKTQGSEVSKTSEELKRKARAERFGLPVP 140
+RAERF +P + + K+ RA RFG T K Q + V K K RA+RFG+ V
Sbjct: 107 KRAERFNVPANL--DSKKAARAIRFGLPSTEQKGQTTGVKSLVNVDKLKVRAQRFGVSVS 164
Query: 141 --SSVSEEEAKRKARLARFAPYPKTDSVEED---KRKARALRF 178
+ +E++ K K R RF + S+ ED K++ R+ RF
Sbjct: 165 PVTKKTEDDEKLKKRKERFGIVTNSASISEDSEAKKRKRSERF 207
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 8/58 (13%)
Query: 85 RAERFGMPV-----QMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
RA+RFG+ V + ++EK R ERFG T + +S+ SE KRK R+ERFGL
Sbjct: 155 RAQRFGVSVSPVTKKTEDDEKLKKRKERFGIV--TNSASISEDSEAKKRK-RSERFGL 209
>gi|417408570|gb|JAA50831.1| Putative sap domain-containing ribonucleoprotein cytokine induced
protein, partial [Desmodus rotundus]
Length = 199
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG SK S+ K K RA
Sbjct: 86 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSIPSKGLSSDTKPMVNLDKLKERA 143
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 144 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 196
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 104 SLESKKAARAARFGISSIPSKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 163
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 164 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 198
>gi|270006897|gb|EFA03345.1| hypothetical protein TcasGA2_TC013325 [Tribolium castaneum]
Length = 258
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Query: 85 RAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVPSSV- 143
RA++F V +S E K+ RAERFGT + T ++ TS ++ K RAERFG V +++
Sbjct: 166 RAKKFD--VSLSNEAKKVARAERFGTANPTNSAQTKNTSIDV-LKQRAERFGGSVSTAMV 222
Query: 144 ----SEEEAKRKARLARFAPYPKTDSVEEDKRKARALRF 178
+ KRK R P EDK K R RF
Sbjct: 223 SLDQQQRLEKRKERFGIVTP--------EDKAKQRLERF 253
>gi|410964731|ref|XP_003988906.1| PREDICTED: SAP domain-containing ribonucleoprotein isoform 1 [Felis
catus]
gi|410964733|ref|XP_003988907.1| PREDICTED: SAP domain-containing ribonucleoprotein isoform 2 [Felis
catus]
Length = 210
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG SK S+ K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPSKGLSSDAKPMVNLDKLKERA 154
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 155 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S DA + + K RA+RFG+ V + ++EK
Sbjct: 115 SLESKKAARAARFGISSVPSKGLSSDAKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 174
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 175 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 209
>gi|402886327|ref|XP_003906583.1| PREDICTED: dnaJ homolog subfamily C member 14-like [Papio anubis]
Length = 603
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 63/115 (54%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG-SEVSKTSEEL-KRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S T+G S +K L K K RA
Sbjct: 490 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 547
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 548 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 600
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 508 SLESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 567
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 568 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 602
>gi|119617241|gb|EAW96835.1| hCG2016179, isoform CRA_c [Homo sapiens]
Length = 460
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 63/115 (54%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG-SEVSKTSEEL-KRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S T+G S +K L K K RA
Sbjct: 347 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 404
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 405 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 457
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 365 SLESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 424
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 425 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 459
>gi|225713942|gb|ACO12817.1| Nuclear protein Hcc-1 [Lepeophtheirus salmonis]
Length = 264
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 23/117 (19%)
Query: 77 TDTQKKIRRAERFGM-----PVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKAR 131
TD QK +R A RFG+ PV M +K R+ERFG + S + K + + K R
Sbjct: 151 TDDQKSVR-AARFGIEEASTPVDM---DKLKQRSERFG---QVNSSAIKKMEDAERIKKR 203
Query: 132 AERFG-----LPVPSSVS-----EEEAKRKARLARFAPYPKTDSVEEDKRKARALRF 178
ERFG PV + + K K R RF P + V+E K+K R++RF
Sbjct: 204 QERFGVVTAEFPVKKISTGVLDPANDEKLKKRAERFGAAPSSSDVDE-KKKLRSMRF 259
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 120 SKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFS 179
+K ++E K AR ERFG+ PSS ++++ R ARF + V+ DK K R+ RF
Sbjct: 128 TKMNDEDKSNARKERFGIETPSSTDDQKS---VRAARFGIEEASTPVDMDKLKQRSERFG 184
Query: 180 KTSSSSVSQV 189
+ +SS++ ++
Sbjct: 185 QVNSSAIKKM 194
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Query: 64 TAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTS 123
T+ SP D + D K R ERFG+ S +++++ RA RFG E S
Sbjct: 120 TSASPT--DHTKMNDEDKSNARKERFGIETPSSTDDQKSVRAARFGI------EEASTPV 171
Query: 124 EELKRKARAERFGLPVPSSVSE-EEAKR-KARLARF----APYP-------KTDSVEEDK 170
+ K K R+ERFG S++ + E+A+R K R RF A +P D ++K
Sbjct: 172 DMDKLKQRSERFGQVNSSAIKKMEDAERIKKRQERFGVVTAEFPVKKISTGVLDPANDEK 231
Query: 171 RKARALRFSKTSSSS 185
K RA RF SSS
Sbjct: 232 LKKRAERFGAAPSSS 246
>gi|281344890|gb|EFB20474.1| hypothetical protein PANDA_020791 [Ailuropoda melanoleuca]
Length = 188
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG SK S+ K K RA
Sbjct: 86 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSGPSKGLSSDAKPMVNLDKLKERA 143
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF 157
+RFGL V SS+ SE++ K K R RF
Sbjct: 144 QRFGLNV-SSISRKSEDDEKLKKRKERF 170
>gi|431913995|gb|ELK15257.1| SAP domain-containing ribonucleoprotein [Pteropus alecto]
Length = 214
Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG SK S+ K K RA
Sbjct: 101 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPSKGLSSDTKPMVNLDKLKERA 158
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 159 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 211
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 119 SLESKKAARAARFGISSVPSKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 178
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 179 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 213
>gi|405973406|gb|EKC38123.1| SAP domain-containing ribonucleoprotein [Crassostrea gigas]
Length = 237
Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 73 ADLVTDTQKKIRRAERFGMPV-----QMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELK 127
+D+ TD K +RAERFG V +++ EK RAERFGT +SK++EE +
Sbjct: 145 SDVATDVDKLKQRAERFGTVVAPVLSKVATTEKLKERAERFGT---VVAPVLSKSAEEER 201
Query: 128 RKARAERFGLPVPSSVSEEEAKRKARLARFAPY 160
R ERFG V S+ S + ++++ P+
Sbjct: 202 LLKRKERFGAGVTSASSTDSSEKECHEMDNVPF 234
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 46/94 (48%), Gaps = 18/94 (19%)
Query: 76 VTDTQKKIRRAERFGMPVQMS----------EEEKRNTRAERFGTGSKTQGSEVSKTSEE 125
+ D KK RAERF VQ S + +K RAERFGT S+V+ T
Sbjct: 119 LNDDLKKKARAERFSGTVQASNGKITSDVATDVDKLKQRAERFGTVVAPVLSKVATTE-- 176
Query: 126 LKRKARAERFGL---PVPSSVSEEE--AKRKARL 154
K K RAERFG PV S +EEE KRK R
Sbjct: 177 -KLKERAERFGTVVAPVLSKSAEEERLLKRKERF 209
>gi|332207627|ref|XP_003252897.1| PREDICTED: SAP domain-containing ribonucleoprotein [Nomascus
leucogenys]
Length = 180
Score = 43.5 bits (101), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG-SEVSKTSEEL-KRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S T+G S +K L K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 154
Query: 133 ERFGLPVPSSVSEEEAKRKARLARF 157
+RFGL V SS+S + KRK R RF
Sbjct: 155 QRFGLNV-SSISRKAKKRK-RAERF 177
>gi|410349327|gb|JAA41267.1| SAP domain containing ribonucleoprotein [Pan troglodytes]
gi|410349329|gb|JAA41268.1| SAP domain containing ribonucleoprotein [Pan troglodytes]
Length = 215
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 63/115 (54%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG-SEVSKTSEEL-KRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S T+G S +K L K K RA
Sbjct: 102 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 159
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 160 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 212
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 120 SLESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 179
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 180 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 214
>gi|32129199|ref|NP_149073.1| SAP domain-containing ribonucleoprotein [Homo sapiens]
gi|197102042|ref|NP_001126889.1| SAP domain-containing ribonucleoprotein [Pongo abelii]
gi|332839044|ref|XP_522431.3| PREDICTED: SAP domain-containing ribonucleoprotein isoform 3 [Pan
troglodytes]
gi|403294104|ref|XP_003938044.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 1
[Saimiri boliviensis boliviensis]
gi|403294106|ref|XP_003938045.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 2
[Saimiri boliviensis boliviensis]
gi|403294108|ref|XP_003938046.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 3
[Saimiri boliviensis boliviensis]
gi|403294110|ref|XP_003938047.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 4
[Saimiri boliviensis boliviensis]
gi|426372942|ref|XP_004053372.1| PREDICTED: SAP domain-containing ribonucleoprotein isoform 1
[Gorilla gorilla gorilla]
gi|426372944|ref|XP_004053373.1| PREDICTED: SAP domain-containing ribonucleoprotein isoform 2
[Gorilla gorilla gorilla]
gi|18202440|sp|P82979.3|SARNP_HUMAN RecName: Full=SAP domain-containing ribonucleoprotein; AltName:
Full=Cytokine-induced protein of 29 kDa; AltName:
Full=Nuclear protein Hcc-1; AltName:
Full=Proliferation-associated cytokine-inducible protein
CIP29
gi|75054714|sp|Q5R4V4.3|SARNP_PONAB RecName: Full=SAP domain-containing ribonucleoprotein; AltName:
Full=Nuclear protein Hcc-1
gi|20069116|gb|AAM09686.1|AF486281_1 proliferation associated cytokine-inducible protein CIP29 [Homo
sapiens]
gi|13937971|gb|AAH07099.1| Cytokine induced protein 29 kDa [Homo sapiens]
gi|13940310|emb|CAC37950.1| HCC-1 protein [Homo sapiens]
gi|55733054|emb|CAH93212.1| hypothetical protein [Pongo abelii]
gi|119617244|gb|EAW96838.1| hCG2016179, isoform CRA_e [Homo sapiens]
gi|158254448|dbj|BAF83197.1| unnamed protein product [Homo sapiens]
gi|208966876|dbj|BAG73452.1| Nuclear protein Hcc-1 [synthetic construct]
gi|380785631|gb|AFE64691.1| SAP domain-containing ribonucleoprotein [Macaca mulatta]
gi|384943970|gb|AFI35590.1| SAP domain-containing ribonucleoprotein [Macaca mulatta]
gi|410217158|gb|JAA05798.1| SAP domain containing ribonucleoprotein [Pan troglodytes]
gi|410288926|gb|JAA23063.1| SAP domain containing ribonucleoprotein [Pan troglodytes]
Length = 210
Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 63/115 (54%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG-SEVSKTSEEL-KRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S T+G S +K L K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 154
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 155 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 115 SLESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 174
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 175 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 209
>gi|338726365|ref|XP_003365306.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 3
[Equus caballus]
Length = 150
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG SK S+ K K RA
Sbjct: 37 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPSKGLSSDTKPMVNLDKLKERA 94
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 95 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 147
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 55 SLESKKAARAARFGISSVPSKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 114
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 115 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 149
>gi|440797997|gb|ELR19071.1| hypothetical protein ACA1_236490 [Acanthamoeba castellanii str.
Neff]
Length = 189
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 11/88 (12%)
Query: 75 LVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSK-----TSEELKRK 129
L KK +RAERFG+ + EE+K+ R ERFG + + + K T E K++
Sbjct: 72 LADSDDKKRKRAERFGVASPLVEEDKKKKRGERFGIADEAEVKQKRKQRFGTTKETEKKE 131
Query: 130 ARAERFGLPVPSSVSEEEAKRKARLARF 157
RA+RFG ++++ K+K R RF
Sbjct: 132 LRAQRFG------TTKDDDKKKQRAERF 153
>gi|145341330|ref|XP_001415766.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575989|gb|ABO94058.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 256
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 23/92 (25%)
Query: 75 LVTDTQKKIRRAERFGMPVQMSEEEK---RNTRAE-RFGT-----GSKTQGSEVSKTSE- 124
V D +++ RAERF +P +SE+EK RN AE +FG G+ + KT+E
Sbjct: 145 FVKDLERRKERAERFKLPFALSEQEKTRIRNVGAEKKFGLDNAENGANGTAAPKEKTAEE 204
Query: 125 --------ELKRKARAERFG-----LPVPSSV 143
E K KARAERFG LP P+ +
Sbjct: 205 KAKDKADFEAKLKARAERFGDALKPLPKPTPM 236
>gi|344266177|ref|XP_003405157.1| PREDICTED: SAP domain-containing ribonucleoprotein-like [Loxodonta
africana]
Length = 210
Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 76/168 (45%), Gaps = 34/168 (20%)
Query: 23 EGNPKNNVGPMDLEQNPGADVNSSAVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKK 82
E PK P+ E+ P V+ +A K V IT+ P T++
Sbjct: 62 EEEPKPIELPVKEEEPPEKTVDMAA---------EKKVVKITSEIP---------QTERM 103
Query: 83 IRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEEL---KRKARAERFGLPV 139
+RAERF +PV + E K+ RA RFG S S T + K K RA+RFGL V
Sbjct: 104 QKRAERFNVPVSL--ESKKAARAARFGIPSVPTKGLSSDTKPMINLDKLKERAQRFGLNV 161
Query: 140 PSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 162 -SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ + +S D + + K RA+RFG+ V + ++EK
Sbjct: 115 SLESKKAARAARFGIPSVPTKGLSSDTKPMINLDKLKERAQRFGLNVSSISRKSEDDEKL 174
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 175 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 209
>gi|90078538|dbj|BAE88949.1| unnamed protein product [Macaca fascicularis]
Length = 164
Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 78/155 (50%), Gaps = 25/155 (16%)
Query: 36 EQNPGADVNSSAVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPVQM 95
+Q+P + ++ +KK K V IT+ P T++ +RAERF +PV +
Sbjct: 20 KQSPLSYLSKRKNPLKKLLMSEKKVVKITSEIP---------QTERMQKRAERFNVPVSL 70
Query: 96 SEEEKRNTRAERFGTGS-KTQG-SEVSKTSEEL-KRKARAERFGLPVPSSV---SEEEAK 149
E K+ RA RFG S T+G S +K L K K RA+RFGL V SS+ SE++ K
Sbjct: 71 --ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERAQRFGLNV-SSISRKSEDDEK 127
Query: 150 RKARLARF------APYPKTDSVEEDKRKARALRF 178
K R RF A T+ E KRK RA RF
Sbjct: 128 LKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 161
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 69 SLESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 128
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 129 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 163
>gi|159490962|ref|XP_001703442.1| hypothetical protein CHLREDRAFT_182801 [Chlamydomonas reinhardtii]
gi|158280366|gb|EDP06124.1| hypothetical protein CHLREDRAFT_182801 [Chlamydomonas reinhardtii]
Length = 254
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 14/83 (16%)
Query: 78 DTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
D +K +RA+RF + E+EK+ RAERFG T+ E+ E+ K+ RA RFG
Sbjct: 151 DDDRKKQRAQRFNILDPDLEKEKQLKRAERFG----TKHPEL----EQKKKDQRAARFG- 201
Query: 138 PVPSSVSEEEAKRKARLARFAPY 160
+ +EE K+K RL +F P
Sbjct: 202 -----IVDEETKKKQRLDKFKPL 219
>gi|403277407|ref|XP_003930354.1| PREDICTED: SAP domain-containing ribonucleoprotein-like [Saimiri
boliviensis boliviensis]
Length = 210
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 9/88 (10%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV++ E K+ RA RFG +K S+ T K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVRL--ESKKAARAARFGISLVPTKGLSSDNKPTVNLDKLKERA 154
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF 157
+RFGL V SS+ SE++ K K R RF
Sbjct: 155 QRFGLNV-SSISRKSEDDEKLKKRKERF 181
>gi|167774081|gb|ABZ92475.1| cytokine induced protein 29 kDa [synthetic construct]
Length = 389
Score = 43.1 bits (100), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 63/115 (54%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG-SEVSKTSEEL-KRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S T+G S +K L K K RA
Sbjct: 276 IPQTERMQKRAERFNVPVSL--ESKKVARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 333
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 334 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 386
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 294 SLESKKVARAARFGISSVPTKGLSSDNKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 353
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 354 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 388
>gi|335288104|ref|XP_003355521.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 2
[Sus scrofa]
Length = 150
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 76/168 (45%), Gaps = 34/168 (20%)
Query: 23 EGNPKNNVGPMDLEQNPGADVNSSAVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKK 82
E PK P+ E+ P V+ +A K V IT+ P T++
Sbjct: 2 EEEPKPIELPVKEEEPPEKTVDVAA---------EKKVVKITSEMP---------QTERM 43
Query: 83 IRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEELKRKARAERFGLPV 139
+RAERF +PV + E K+ RA RFG SK S+ K K RA+RFGL V
Sbjct: 44 QKRAERFNVPVSL--ESKKAARAARFGISSVPSKGLSSDTKPMVNLDKLKERAQRFGLNV 101
Query: 140 PSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 102 -SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 147
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 55 SLESKKAARAARFGISSVPSKGLSSDTKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 114
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 115 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 149
>gi|426372946|ref|XP_004053374.1| PREDICTED: SAP domain-containing ribonucleoprotein isoform 3
[Gorilla gorilla gorilla]
gi|62202489|gb|AAH93051.1| CIP29 protein [Homo sapiens]
Length = 150
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 63/115 (54%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG-SEVSKTSEEL-KRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S T+G S +K L K K RA
Sbjct: 37 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERA 94
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 95 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 147
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 55 SLESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 114
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 115 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 149
>gi|351703645|gb|EHB06564.1| SAP domain-containing ribonucleoprotein, partial [Heterocephalus
glaber]
Length = 188
Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 79 TQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS---KTQGSEVSKTSEELKRKARAERF 135
T++ +RAERF +PV + E K+ RA RFG S K S+ K K RA+RF
Sbjct: 89 TERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDTKPMVNLDKLKERAQRF 146
Query: 136 GLPVPSSV---SEEEAKRKARLARF 157
GL V SS+ SE++ K K R RF
Sbjct: 147 GLNV-SSISRKSEDDEKLKKRKERF 170
>gi|355684407|gb|AER97388.1| DnaJ-like protein, subfamily C, member 14 [Mustela putorius furo]
Length = 144
Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG SK S+ K K RA
Sbjct: 36 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPSKGLSSDAKPMVNLDKLKERA 93
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF 157
+RFGL V SS+ SE++ K K R RF
Sbjct: 94 QRFGLNV-SSISRKSEDDEKLKKRKERF 120
>gi|452824762|gb|EME31763.1| hypothetical protein Gasu_11380 [Galdieria sulphuraria]
Length = 179
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 59 TAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSE---EEKRNTRAERFGTGSKTQ 115
+ V ++ + D +L +K+ +RAERFG+P S+ E K+ +RA RF G +
Sbjct: 70 SGVVDNSIGRLPTDEELTALEEKRRKRAERFGVPYVPSKEFLEHKKLSRARRF--GEELV 127
Query: 116 GSEVSKTSEELKRKARAERFGLP---VPSSVSEE 146
E S EE KRK RAERFGL VP +S++
Sbjct: 128 EPEDSSKIEEKKRK-RAERFGLSSQAVPDKLSKQ 160
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 15/84 (17%)
Query: 122 TSEEL-----KRKARAERFGLPVPSSVSEEEAKRKARLARFAP---YPKTDSVEEDKRKA 173
T EEL KR+ RAERFG+P S E K+ +R RF P+ S E+K++
Sbjct: 82 TDEELTALEEKRRKRAERFGVPYVPSKEFLEHKKLSRARRFGEELVEPEDSSKIEEKKRK 141
Query: 174 RALRFSKTS-------SSSVSQVN 190
RA RF +S S V+Q+N
Sbjct: 142 RAERFGLSSQAVPDKLSKQVTQIN 165
>gi|409080506|gb|EKM80866.1| hypothetical protein AGABI1DRAFT_126912 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 600
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 91 MPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVPSSVSEEEA-K 149
+P + SE EKR RA RFG S+ K KARA+RFG S+V EE K
Sbjct: 83 LPPEDSELEKRKARAARFGIPLVNDDSD--------KLKARAQRFGTAAASNVDAEELEK 134
Query: 150 RKARLARFAPYP 161
R+ R ARF P
Sbjct: 135 RQRRAARFGTNP 146
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 6/61 (9%)
Query: 77 TDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEEL-KRKARAERF 135
++ +K+ RA RFG+P+ + +K RA+RFGT + S V +EEL KR+ RA RF
Sbjct: 88 SELEKRKARAARFGIPLVNDDSDKLKARAQRFGTAA---ASNVD--AEELEKRQRRAARF 142
Query: 136 G 136
G
Sbjct: 143 G 143
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Query: 123 SEELKRKARAERFGLPVPSSVSEEEAKRKARLARF--APYPKTDSVEEDKRKARALRF 178
SE KRKARA RFG+P+ V+++ K KAR RF A D+ E +KR+ RA RF
Sbjct: 88 SELEKRKARAARFGIPL---VNDDSDKLKARAQRFGTAAASNVDAEELEKRQRRAARF 142
>gi|294891621|ref|XP_002773655.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239878859|gb|EER05471.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 453
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 81 KKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVP 140
KK+ RA RFG+ + +E+ K R+ERF T TQ SE + E ++R RA+RFGL
Sbjct: 137 KKLERALRFGIVSKQTEQAKMKARSERFAT--TTQESE-NPDEETVRRLKRAQRFGLVTA 193
Query: 141 SSVSEEEAKRKARLARFAPYPKTDSV 166
+E E KR R++ + K + +
Sbjct: 194 D--TEAEKKRMRRISVMSTEEKMERL 217
>gi|426197406|gb|EKV47333.1| hypothetical protein AGABI2DRAFT_117908 [Agaricus bisporus var.
bisporus H97]
Length = 588
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 91 MPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVPSSVSEEEA-K 149
+P + SE EKR RA RFG S+ K KARA+RFG S+V EE K
Sbjct: 85 LPPEDSELEKRKARAARFGIPLVNDDSD--------KLKARAQRFGTAAASNVDAEELEK 136
Query: 150 RKARLARFAPYP 161
R+ R ARF P
Sbjct: 137 RQRRAARFGTNP 148
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 6/61 (9%)
Query: 77 TDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEEL-KRKARAERF 135
++ +K+ RA RFG+P+ + +K RA+RFGT + S V +EEL KR+ RA RF
Sbjct: 90 SELEKRKARAARFGIPLVNDDSDKLKARAQRFGTAA---ASNVD--AEELEKRQRRAARF 144
Query: 136 G 136
G
Sbjct: 145 G 145
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
Query: 123 SEELKRKARAERFGLPVPSSVSEEEAKRKARLARF--APYPKTDSVEEDKRKARALRF 178
SE KRKARA RFG+P+ V+++ K KAR RF A D+ E +KR+ RA RF
Sbjct: 90 SELEKRKARAARFGIPL---VNDDSDKLKARAQRFGTAAASNVDAEELEKRQRRAARF 144
>gi|380817182|gb|AFE80465.1| SAP domain-containing ribonucleoprotein [Macaca mulatta]
Length = 207
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 59/107 (55%), Gaps = 16/107 (14%)
Query: 84 RRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG-SEVSKTSEEL-KRKARAERFGLPVP 140
+RAERF +PV + E K+ RA RFG S T+G S +K L K K RA+RFGL V
Sbjct: 102 KRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERAQRFGLNV- 158
Query: 141 SSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 159 SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 204
Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ +S D + + K RA+RFG+ V + ++EK
Sbjct: 112 SLESKKAARAARFGISSVPTKGLSSDNKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 171
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 172 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 206
>gi|296234976|ref|XP_002762696.1| PREDICTED: SAP domain-containing ribonucleoprotein-like [Callithrix
jacchus]
Length = 210
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG--SEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S T+G S+ K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLPSDNKPMVNLDKLKERA 154
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 155 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGSGTTEDTEAKKRK-RAERF 207
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 85 RAERFGMPV-----QMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
RA+RFG+ V + ++EK R ERFG + + GS ++ +E KRK RAERFG+
Sbjct: 153 RAQRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSAGSGTTEDTEAKKRK-RAERFGI 209
>gi|296211966|ref|XP_002752632.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 1
[Callithrix jacchus]
gi|390467766|ref|XP_003733820.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 2
[Callithrix jacchus]
gi|390467768|ref|XP_003733821.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 3
[Callithrix jacchus]
Length = 210
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG--SEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S T+G S+ K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLPSDNKPMVSLDKLKERA 154
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 155 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGSGTTEDTEAKKRK-RAERF 207
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 85 RAERFGMPV-----QMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
RA+RFG+ V + ++EK R ERFG + + GS ++ +E KRK RAERFG+
Sbjct: 153 RAQRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSAGSGTTEDTEAKKRK-RAERFGI 209
>gi|327276978|ref|XP_003223243.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 2
[Anolis carolinensis]
Length = 190
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 84 RRAERFGMPVQMSEEEKRNTRAERFGT---GSKTQGSEVSKTSE-ELKRKARAERFGLPV 139
+RAERF +PV + E K+ RA RFG +K G E T+E + K K R ERFG+
Sbjct: 108 KRAERFNVPVSL--ESKKAARAARFGMSVASTKGLGEESKTTTEDDEKLKKRKERFGIVT 165
Query: 140 PS----SVSEEEAKRKARLARF 157
S + + EAK++ R RF
Sbjct: 166 SSAGTGTTEDTEAKKRKRAERF 187
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 13/69 (18%)
Query: 81 KKIRRAERFGMPVQ----MSEE--------EKRNTRAERFGTGSKTQGSEVSKTSEELKR 128
KK RA RFGM V + EE EK R ERFG + + G+ ++ +E KR
Sbjct: 122 KKAARAARFGMSVASTKGLGEESKTTTEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKR 181
Query: 129 KARAERFGL 137
K RAERFG+
Sbjct: 182 K-RAERFGI 189
>gi|66359080|ref|XP_626718.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|46228245|gb|EAK89144.1| hypothetical protein cgd3_1430 [Cryptosporidium parvum Iowa II]
Length = 124
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 18/108 (16%)
Query: 72 DADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKAR 131
D + +++ ++ R ++FG +E EKR R++RFG+ TSE+ KRK R
Sbjct: 31 DVNQLSEKERVELRRQKFGACGPSTEAEKRLARSKRFGS-----------TSEDDKRKLR 79
Query: 132 AERFGLPVPSSVSEEEAKRKARLARFAPYPKT-DSVEEDKRKARALRF 178
ERFG+ +SE + K K R RF + D E K +AR LRF
Sbjct: 80 QERFGM-----ISEAD-KIKNRRERFGTMSRVNDPDHEKKIQARKLRF 121
>gi|290462523|gb|ADD24309.1| SAP domain-containing ribonucleoprotein [Lepeophtheirus salmonis]
Length = 264
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 120 SKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFS 179
+K ++E K AR ERFG+ PSS ++++ R ARF + V+ DK K R+ RF
Sbjct: 128 TKMNDEDKSNARKERFGIETPSSTDDQKS---VRAARFGIEEASTPVDMDKLKQRSERFG 184
Query: 180 KTSSSSVSQV 189
+ SS++ ++
Sbjct: 185 QVDSSAIKKM 194
Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 21/135 (15%)
Query: 64 TAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTS 123
T+ SP D + D K R ERFG+ S +++++ RA RFG E S
Sbjct: 120 TSASPT--DHTKMNDEDKSNARKERFGIETPSSTDDQKSVRAARFGI------EEASTPV 171
Query: 124 EELKRKARAERFGLPVPSSVSE-EEAKR-KARLARF----APYP-------KTDSVEEDK 170
+ K K R+ERFG S++ + E+A+R K R RF A +P D ++K
Sbjct: 172 DMDKLKQRSERFGQVDSSAIKKMEDAERIKKRQERFGVVTAEFPVKKISTGVIDHANDEK 231
Query: 171 RKARALRFSKTSSSS 185
K RA RF SS
Sbjct: 232 LKKRAERFGAAPGSS 246
>gi|402594880|gb|EJW88806.1| hypothetical protein WUBG_00284 [Wuchereria bancrofti]
Length = 250
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 82 KIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVPS 141
K++RA+RFG+P +S+E+ + RAERFG + + + E K+ R FG+ +
Sbjct: 127 KLKRAQRFGLP--LSDEQMKQKRAERFGM-QLGAAANIGEILAEKKKGGRRGLFGIISET 183
Query: 142 SVSEEEAKRKARLARFAPYPKTDSVEEDK 170
+E ++AR RF K+ +V DK
Sbjct: 184 EKMQEILNKRAR--RFGVVNKSSAVVADK 210
>gi|348677060|gb|EGZ16877.1| hypothetical protein PHYSODRAFT_503362 [Phytophthora sojae]
Length = 218
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 16/87 (18%)
Query: 81 KKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLP-- 138
K+++RAERF + + + ++K+ RAERFG +EE +R RA+RF L
Sbjct: 143 KRLKRAERFHLETKDTLDKKKEARAERFGLN-----------AEEKRRLERAKRFNLETS 191
Query: 139 --VPSSVSEE-EAKRKARLARFAPYPK 162
V SS++ E KR+ R+ RFA PK
Sbjct: 192 EVVRSSLAPLFEEKRRKRMERFAAAPK 218
>gi|290561519|gb|ADD38160.1| SAP domain-containing ribonucleoprotein [Lepeophtheirus salmonis]
Length = 264
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 120 SKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALRFS 179
+K ++E K AR ERFG+ PSS ++++ R ARF + V+ DK K R+ RF
Sbjct: 128 TKMNDEEKSNARKERFGIETPSSTDDQKS---VRAARFGIEEASTPVDMDKLKQRSERFG 184
Query: 180 KTSSSSVSQV 189
+ +SS++ ++
Sbjct: 185 QVNSSAIKKM 194
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 21/135 (15%)
Query: 64 TAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTS 123
T+ SP D + D +K R ERFG+ S +++++ RA RFG E S
Sbjct: 120 TSASPT--DDTKMNDEEKSNARKERFGIETPSSTDDQKSVRAARFGI------EEASTPV 171
Query: 124 EELKRKARAERFGLPVPSSVSE-EEAKR-KARLARF----APYP-------KTDSVEEDK 170
+ K K R+ERFG S++ + E+A+R K R RF A +P D ++K
Sbjct: 172 DMDKLKQRSERFGQVNSSAIKKMEDAERIKKRQERFGVVTAEFPVKKISTGVLDPANDEK 231
Query: 171 RKARALRFSKTSSSS 185
K RA RF SSS
Sbjct: 232 LKKRAERFGAAPSSS 246
>gi|238594707|ref|XP_002393559.1| hypothetical protein MPER_06687 [Moniliophthora perniciosa FA553]
gi|215461220|gb|EEB94489.1| hypothetical protein MPER_06687 [Moniliophthora perniciosa FA553]
Length = 254
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 54/123 (43%), Gaps = 32/123 (26%)
Query: 80 QKKIRRAERFGMP-----------------VQMSEEEKRNTRAERFGTGSKTQGSEVSKT 122
+K+ +RA RFG+P + E+EK +RA RFG + G + T
Sbjct: 133 EKRKQRAARFGIPMVEPKSKPAHKSSDKTTISPHEQEKLKSRAARFGIATDESGKRLDTT 192
Query: 123 SEELKRKARAERFGLPVPSSVSEEEAKRKARLARF-------APYPKTDSVEEDKRKARA 175
S+ K++A + EE+KR+ R ARF P D E ++RK RA
Sbjct: 193 SKLSKKRASE--------GAADPEESKRQKRAARFNIQKGKTTEAPVVDPEELERRKKRA 244
Query: 176 LRF 178
RF
Sbjct: 245 ERF 247
>gi|301789897|ref|XP_002930365.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 2
[Ailuropoda melanoleuca]
Length = 187
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGT------GSKTQGSEVSKTSEELKRK 129
+ T++ +RAERF +PV + E K+ RA RFG G + +S+ E+LK+
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSGPSKGLSSDAKPMSEDDEKLKK- 153
Query: 130 ARAERFGLPVPS----SVSEEEAKRKARLARF 157
R ERFG+ S + + EAK++ R RF
Sbjct: 154 -RKERFGIVTSSAGTGTTEDTEAKKRKRAERF 184
>gi|160931681|ref|ZP_02079075.1| hypothetical protein CLOLEP_00512 [Clostridium leptum DSM 753]
gi|156869326|gb|EDO62698.1| 1,4-alpha-glucan branching enzyme [Clostridium leptum DSM 753]
Length = 675
Score = 41.2 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 17/146 (11%)
Query: 42 DVNSSAVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEKR 101
D S + ++ D K + + PV R++ RFG+P+ + E
Sbjct: 539 DYTQSVICFRRIDKDGKELIAVCNFQPVE-------------RKSYRFGVPLAGTYAEVF 585
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVP--SSVSEEEAKRKARLARFAP 159
N+ A+ FG T GS + SEE+ + L +P S + + A++K P
Sbjct: 586 NSEAKEFGGCGTTNGSGIR--SEEIAMHGYEQSIELTLPPMSVLFLKCARKKPVRKPREP 643
Query: 160 YPKTDSVEEDKRKARALRFSKTSSSS 185
++ E++++ A+A R +T SS
Sbjct: 644 KELPETAEKEEKTAKAPRKPRTRKSS 669
>gi|326924692|ref|XP_003208559.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 3
[Meleagris gallopavo]
Length = 187
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEE-LKRKAR 131
++ ++ +RAERF +PV + E K+ RA RFG +K ++ TSEE K K R
Sbjct: 97 ISQMERMQKRAERFNVPVSL--ESKKAARAARFGLATVSTKGLSADSKPTSEEDEKLKKR 154
Query: 132 AERFGLPVPS----SVSEEEAKRKARLARF 157
ERFG+ S + + EAK++ R RF
Sbjct: 155 KERFGIVTSSAGAGATEDTEAKKRKRAERF 184
>gi|403419667|emb|CCM06367.1| predicted protein [Fibroporia radiculosa]
Length = 244
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 60 AVTITAVSPVSGDADLVT----DTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQ 115
++ + SP A +V+ + +K+ RA RF +P + E+ KR+ + G +
Sbjct: 114 SILVPIASPPKSPAGVVSSQDEELEKRKARAARFSIP--LVEQPKRSPSSNLLGPAYRVS 171
Query: 116 GSEVSKTS--EELKRKARAERFGLPVPSSVS-EEEAKRKARLARFAPYPKTDSVEEDKRK 172
+ S ++ K ARAERFG P+S S E A RK R A D+ E ++RK
Sbjct: 172 TKALMSASLDDQEKMAARAERFGTGPPASASIIERASRKKRSASL--MEAVDAEEMERRK 229
Query: 173 ARALRF 178
RA RF
Sbjct: 230 KRAERF 235
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 91 MPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTS--------------EEL-KRKARAERF 135
M + ++EK RAERFGTG S + + S EE+ +RK RAERF
Sbjct: 176 MSASLDDQEKMAARAERFGTGPPASASIIERASRKKRSASLMEAVDAEEMERRKKRAERF 235
Query: 136 GLPV 139
GL V
Sbjct: 236 GLSV 239
>gi|221219266|gb|ACM08294.1| Nuclear protein Hcc-1 [Salmo salar]
Length = 209
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 17/107 (15%)
Query: 84 RRAERFGMPVQMSEEEKRNTRAERFGTG-----SKTQGSEVSKTS----EELKRKARAER 134
+RAERF +P S + K+ RA RFG + T G V+K++ E+LK+ RAER
Sbjct: 103 KRAERFNVPA--SADGKKAIRAARFGLPATAPPTSTPGVTVNKSTAVSVEQLKK--RAER 158
Query: 135 FGLPVPSSVS---EEEAKRKARLARFAPYPKTDSVEEDKRKARALRF 178
FG V SSVS EE+ K K R RF E K++ R+ RF
Sbjct: 159 FGGNV-SSVSKKVEEDEKLKKRKERFGILAAVTPDVEAKKQKRSERF 204
>gi|221219888|gb|ACM08605.1| Nuclear protein Hcc-1 [Salmo salar]
Length = 209
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 17/107 (15%)
Query: 84 RRAERFGMPVQMSEEEKRNTRAERFGTG-----SKTQGSEVSKTS----EELKRKARAER 134
+RAERF +P S + K+ RA RFG + T G V+K++ E+LK+ RAER
Sbjct: 103 KRAERFNVPA--SADGKKAIRAARFGLPATAPPTSTPGVTVNKSTAVSVEQLKK--RAER 158
Query: 135 FGLPVPSSVS---EEEAKRKARLARFAPYPKTDSVEEDKRKARALRF 178
FG V SSVS EE+ K K R RF E K++ R+ RF
Sbjct: 159 FGGNV-SSVSKKVEEDEKLKKRKERFGILAAVTPDVEAKKQKRSERF 204
>gi|221220322|gb|ACM08822.1| Nuclear protein Hcc-1 [Salmo salar]
Length = 209
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 17/107 (15%)
Query: 84 RRAERFGMPVQMSEEEKRNTRAERFGTG-----SKTQGSEVSKTS----EELKRKARAER 134
+RAERF +P S + K+ RA RFG + T G V+K++ E+LK+ RAER
Sbjct: 103 KRAERFNVPA--SADGKKAIRAARFGLPATAPPTSTPGVTVNKSTAVSVEQLKK--RAER 158
Query: 135 FGLPVPSSVS---EEEAKRKARLARFAPYPKTDSVEEDKRKARALRF 178
FG V SSVS EE+ K K R RF E K++ R+ RF
Sbjct: 159 FGGNV-SSVSKKVEEDEKLKKRKERFGILAAVTPDVEAKKQKRSERF 204
>gi|225703198|gb|ACO07445.1| Nuclear protein Hcc-1 [Oncorhynchus mykiss]
Length = 209
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 17/107 (15%)
Query: 84 RRAERFGMPVQMSEEEKRNTRAERFGTG-----SKTQGSEVSKTS----EELKRKARAER 134
+RAERF +P S + K+ RA RFG + T G V+K++ E+LK+ RAER
Sbjct: 103 KRAERFNVPA--SADGKKAIRAARFGLPAAAPPTSTPGVTVNKSTAVSVEQLKK--RAER 158
Query: 135 FGLPVPSSVS---EEEAKRKARLARFAPYPKTDSVEEDKRKARALRF 178
FG V SSVS EE+ K K R RF E K++ R+ RF
Sbjct: 159 FGGNV-SSVSKKVEEDEKLKKRKERFGILAAVTPDVEAKKRKRSERF 204
>gi|296489621|tpg|DAA31734.1| TPA: cytokine induced protein 29 kDa-like [Bos taurus]
Length = 170
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG SK S+ K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISPVPSKGLSSDTKPMVNLDKLKERA 154
Query: 133 ERFGLPVPSSVS 144
+RFGL V SS+S
Sbjct: 155 QRFGLNV-SSIS 165
>gi|326924690|ref|XP_003208558.1| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 2
[Meleagris gallopavo]
Length = 170
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 6/75 (8%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQG-SEVSKTSEEL-KRKARA 132
++ ++ +RAERF +PV + E K+ RA RFG + T+G S SK + + K K RA
Sbjct: 97 ISQMERMQKRAERFNVPVSL--ESKKAARAARFGLATVSTKGLSADSKPTVNMDKLKERA 154
Query: 133 ERFGLPVPSSVSEEE 147
+RFGL V SS+S++E
Sbjct: 155 QRFGLNV-SSLSKKE 168
>gi|440897258|gb|ELR48990.1| hypothetical protein M91_07265, partial [Bos grunniens mutus]
Length = 156
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTG---SKTQGSEVSKTSEELKRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG SK S+ K K RA
Sbjct: 86 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISPVPSKGLSSDTKPMVNLDKLKERA 143
Query: 133 ERFGLPVPSSVS 144
+RFGL V SS+S
Sbjct: 144 QRFGLNV-SSIS 154
>gi|256085525|ref|XP_002578970.1| hypothetical protein [Schistosoma mansoni]
gi|353233733|emb|CCD81087.1| hypothetical protein Smp_078090.1 [Schistosoma mansoni]
Length = 290
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 43/124 (34%)
Query: 75 LVTDTQKKIRRAERFGMPV--------------QMSEEEKRNTRAERFG-TGSKTQ---- 115
++D +K + RA+RFG+P+ ++ E EK RAERFG T SKT
Sbjct: 161 FMSDDEKTLARAKRFGLPISNNINTVCLNNTSTKLDELEKLKKRAERFGVTTSKTLEKLT 220
Query: 116 ------------GSEV--------SKTSEELKRKARAERFGLPVP--SSVSEEE--AKRK 151
G + ++ ++EL + RA++FGL + +S+S+ E +KR+
Sbjct: 221 DLERKAKRLEKFGKPLSSSSSSGNTQMNDELAKSIRAQKFGLNLSNNNSISDAEKLSKRQ 280
Query: 152 ARLA 155
AR
Sbjct: 281 ARFG 284
>gi|237681151|ref|NP_001153722.1| SAP domain containing ribonucleoprotein [Tribolium castaneum]
Length = 259
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 85 RAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVPSSV- 143
RA++F V +S E K+ RAERFGT + T ++ + K RAERFG V +++
Sbjct: 166 RAKKFD--VSLSNEAKKVARAERFGTANPTNSAQTKVNTSIDVLKQRAERFGGSVSTAMV 223
Query: 144 ----SEEEAKRKARLARFAPYPKTDSVEEDKRKARALRF 178
+ KRK R P EDK K R RF
Sbjct: 224 SLDQQQRLEKRKERFGIVTP--------EDKAKQRLERF 254
>gi|68071709|ref|XP_677768.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56498012|emb|CAH99629.1| conserved hypothetical protein [Plasmodium berghei]
Length = 158
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 12/75 (16%)
Query: 93 VQMSEEEKRNTRAERFGTGSKT----------QGSEVSKTSEELKRKARAERFGLPVPSS 142
+ ++EE+KR R +RFGT S + + V+K EE +K RAERFGL V ++
Sbjct: 75 LHLTEEKKREIRRKRFGTDSVSTPAALESRAKRFCIVTKQMEEENKKKRAERFGLNV-AN 133
Query: 143 VSEEEAKRKARLARF 157
+++ E K+K R RF
Sbjct: 134 LNDIEMKKK-RAERF 147
>gi|410928971|ref|XP_003977873.1| PREDICTED: SAP domain-containing ribonucleoprotein-like [Takifugu
rubripes]
Length = 210
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 84 RRAERFGMPV-----QMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
+RAERFGM V ++ E+E+ R ERFG + T G E K++ RAERFG+
Sbjct: 153 KRAERFGMNVSTISQKVEEDERLKKRKERFG--ALTSGRAAGAADTEAKKRKRAERFGI 209
>gi|345776458|ref|XP_531625.3| PREDICTED: SAP domain-containing ribonucleoprotein [Canis lupus
familiaris]
Length = 210
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEEL---KRKARA 132
+ T++ +RAERF +PV + E K+ RA RFG S + S + K K RA
Sbjct: 97 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVSSKGLSSDAKPMVNLDKLKERA 154
Query: 133 ERFGLPVPSSV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
+RFGL V SS+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 155 QRFGLNV-SSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 207
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 47 AVEVKKNGNDSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPV-----QMSEEEKR 101
++E KK ++ ++ + +S DA + + K RA+RFG+ V + ++EK
Sbjct: 115 SLESKKAARAARFGISSVSSKGLSSDAKPMVNLDKLKERAQRFGLNVSSISRKSEDDEKL 174
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 175 KKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 209
>gi|225715566|gb|ACO13629.1| Nuclear protein Hcc-1 [Esox lucius]
Length = 213
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 20/110 (18%)
Query: 84 RRAERFGMPVQMSEEEKRNTRAERFGTGSK---------TQGSEVSKTSEELKRKARAER 134
+RAERF +PV S + K+ RAERFG + T + + E+LK+ RAER
Sbjct: 104 KRAERFSVPV--SADNKKAIRAERFGLPAAALPKSAPGVTGNTSTPVSVEQLKK--RAER 159
Query: 135 FGLPVPSSVS---EEEAKRKARLARFAPYPKTDSVEED---KRKARALRF 178
FG V SSVS EE+ K K R RF +V D K+ R+ RF
Sbjct: 160 FGGNV-SSVSKKVEEDEKLKKRKERFGILTAAATVTPDVEAKKLKRSERF 208
>gi|432867173|ref|XP_004071063.1| PREDICTED: LOW QUALITY PROTEIN: SAP domain-containing
ribonucleoprotein-like [Oryzias latipes]
Length = 210
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 77 TDTQKKIRRAERFGMPV-----QMSEEEKRNTRAERFG--TGSKTQGSEVSKTSEELKRK 129
D + +RAERFGM V ++ E+EK R ERFG T + G+E E K++
Sbjct: 146 VDVDQLKKRAERFGMNVSSISQKIEEDEKLKKRKERFGILTSASPGGAE----DAEAKKR 201
Query: 130 ARAERFG 136
RAERFG
Sbjct: 202 KRAERFG 208
>gi|47229082|emb|CAG03834.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 21/114 (18%)
Query: 77 TDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTS--------EELKR 128
T +++ +RAERF +P S E K+ RA RFG ++ GS + E+LK+
Sbjct: 96 TASERLQKRAERFSLPA--SAESKKALRAARFGLPAEGSGSSSGAAANSKAAVNIEQLKK 153
Query: 129 KARAERFGLPVPSSVS---EEEAKRKARLARFAPYPKTDS-----VEEDKRKAR 174
RAERFG+ V S++S EE+ K K R RF S E KRKAR
Sbjct: 154 --RAERFGMNV-STISQKIEEDEKLKKRKERFGALTNAGSAGAADTEAKKRKAR 204
>gi|225705544|gb|ACO08618.1| Nuclear protein Hcc-1 [Oncorhynchus mykiss]
Length = 209
Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 56/107 (52%), Gaps = 17/107 (15%)
Query: 84 RRAERFGMPVQMSEEEKRNTRAERFGTG-----SKTQGSEVSKT----SEELKRKARAER 134
+RAERF +P S + K+ RA RFG + T G V+K+ E+LK+ RAER
Sbjct: 103 KRAERFNVPA--SADGKKAIRAARFGLPAAAPPTSTPGVTVNKSIAVSVEQLKK--RAER 158
Query: 135 FGLPVPSSVS---EEEAKRKARLARFAPYPKTDSVEEDKRKARALRF 178
FG V SSVS EE+ K K R RF E K++ R+ RF
Sbjct: 159 FGGNV-SSVSKKVEEDEKLKKRKERFGILAAVTPDVEAKKRKRSERF 204
>gi|51094627|gb|EAL23879.1| similar to Nuclear protein Hcc-1 (HSPC316) (Proliferation
associated cytokine-inducible protein CIP29) [Homo
sapiens]
Length = 185
Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 84 RRAERFGMPVQMSEEEKRNTRAERFGTGS-KTQGSEVSKTSEEL-KRKARAERFGLPVPS 141
+RAE+F +PV + E K+ +A RFG S T+ ++ L K K RA+RFGL V S
Sbjct: 81 KRAEQFSVPVSL--ESKKAAQAARFGISSVPTKVCHLNTPMVNLDKPKERAQRFGLNV-S 137
Query: 142 SV---SEEEAKRKARLARF------APYPKTDSVEEDKRKARALRF 178
S+ SE++ K K R RF A T+ E KRK RA RF
Sbjct: 138 SISRKSEDDKKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERF 182
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
Query: 85 RAERFGMPV----QMSEEEKR-NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
RA+RFG+ V + SE++K+ R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 128 RAQRFGLNVSSISRKSEDDKKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 184
>gi|225705136|gb|ACO08414.1| Nuclear protein Hcc-1 [Oncorhynchus mykiss]
Length = 212
Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 84 RRAERFGM---PVQMSEE--EKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFG 136
+RAERFGM PV + E EK R ERFG T + V E+K++ RAERFG
Sbjct: 155 KRAERFGMNVSPVAKTVEVDEKLKKRKERFGI--LTAAAAVGAEDSEVKKRKRAERFG 210
>gi|260823623|ref|XP_002606180.1| hypothetical protein BRAFLDRAFT_126497 [Branchiostoma floridae]
gi|229291519|gb|EEN62190.1| hypothetical protein BRAFLDRAFT_126497 [Branchiostoma floridae]
Length = 266
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 64 TAVSPVSGDADLVTD-----TQKKIRRAERFGMPV-----QMSEEEKRNTRAERFGTGSK 113
TA+SP+ ++ + T+ +K +RAERFGM V Q E+EK R +RFG +
Sbjct: 177 TALSPLGDNSAVNTEETGPEMEKLKKRAERFGMNVSTVTQQAEEKEKLLKRKQRFGAVTA 236
Query: 114 TQGSE----VSKTSEELKRKARAERFGLPV 139
VS E K+K RAERFG+ V
Sbjct: 237 GATVAAGTPVSSDEVEAKKKKRAERFGVTV 266
>gi|198419373|ref|XP_002126708.1| PREDICTED: similar to GK12950 [Ciona intestinalis]
Length = 215
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 25/104 (24%)
Query: 95 MSEEEKRNTRAERFGTG-------------SKTQGS-EVSKTSEEL----KRKARAERFG 136
MSEEEKR RA++FG SK G+ +VSK S+E K ++RAERFG
Sbjct: 113 MSEEEKREARAKKFGLKTNELSDTDRLSNRSKRFGTGDVSKISKEAVNPDKLRSRAERFG 172
Query: 137 LPVPSSV--SEEEAKRKARLARFAPYPKTDSVEEDKRKARALRF 178
V + +E E K++ R RF +D +K RA RF
Sbjct: 173 TVVSDVLVKTETEEKKRKRQERFGVNDVSDI-----KKKRAERF 211
>gi|389741921|gb|EIM83109.1| hypothetical protein STEHIDRAFT_124402 [Stereum hirsutum FP-91666
SS1]
Length = 249
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 59 TAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEK-------------RNTRA 105
T + ++ SP+S + + + +K+ RA RFG+P+ + K R R+
Sbjct: 120 TIASASSTSPISNNTGIDEELEKRRSRAARFGIPLVETPTSKTVPPAGKKVSASARQPRS 179
Query: 106 ERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARFAPYPKTDS 165
E+ SK + +E+L KARAERFG+ ++E + K+ R AP + D+
Sbjct: 180 EK---SSKPVAPAPPQDTEKL--KARAERFGI-----QTKEPSSNKSN-KRVAPAEEVDA 228
Query: 166 VEEDKRKARALRF 178
E +RK RA RF
Sbjct: 229 EELARRKKRAERF 241
>gi|221221626|gb|ACM09474.1| Nuclear protein Hcc-1 [Salmo salar]
Length = 216
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 24/114 (21%)
Query: 84 RRAERFGMPVQMSEEEKRNTRAERFGTG-----SKTQGSEVSKTS----EELKRKARAER 134
+RAERF +P S + K+ RA RFG + T G V+K++ E+LK+ RAER
Sbjct: 103 KRAERFNVPA--SADGKKAIRAARFGLSATAPPTSTPGVTVNKSTAVSVEQLKK--RAER 158
Query: 135 FGLPVPSSVS----------EEEAKRKARLARFAPYPKTDSVEEDKRKARALRF 178
FG V SSVS EE+ K K R RF E K++ R+ RF
Sbjct: 159 FGGNV-SSVSKKQNACVLQVEEDEKLKKRKERFGILAAVTPDVEAKKQKRSERF 211
>gi|409044873|gb|EKM54354.1| hypothetical protein PHACADRAFT_258157 [Phanerochaete carnosa
HHB-10118-sp]
Length = 251
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 23/167 (13%)
Query: 32 PMDLEQNPGADVNSSAVEVKKNGNDSKTAVTITAVSPVSGDAD----------LVT---- 77
P++ ++ + ++ EV K S T ++ PVS A +VT
Sbjct: 79 PVESQRKSAQYIETTTPEVAKPAASSSTVAPKSSAKPVSSVAPAAAQPSDTVAIVTPEDP 138
Query: 78 DTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
+ +K+ RA RFG+P+ + K + E+ +T+ + ++ K +ARA+RFGL
Sbjct: 139 ELEKRKARAARFGIPLVEPAQSKASKAVEQTKDAKRTEDVPIGDSA---KLEARAKRFGL 195
Query: 138 --PVPSSVSEEEAK----RKARLARFAPYPKTDSVEEDKRKARALRF 178
V S+ E AK R R AP DS E++KRK RA RF
Sbjct: 196 SQAVTSTGKPELAKDNINRSRGNKRSAPAETVDSEEQEKRKKRAERF 242
>gi|221221124|gb|ACM09223.1| Nuclear protein Hcc-1 [Salmo salar]
Length = 160
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 16/84 (19%)
Query: 58 KTAVTITAVSPVSGDADLVTDTQKKIRRAERFGM---PVQMSEE--EKRNTRAERFGTGS 112
K V ITA P + D L QK RAERFGM PV + E EK R ERFG
Sbjct: 86 KKVVKITA--PAAADEKL----QK---RAERFGMNVSPVAKTVEVDEKLKKRKERFGI-- 134
Query: 113 KTQGSEVSKTSEELKRKARAERFG 136
T + V E K++ RAERFG
Sbjct: 135 LTAAAAVGAEDSEAKKRKRAERFG 158
>gi|391339542|ref|XP_003744107.1| PREDICTED: uncharacterized protein C31H12.03c-like [Metaseiulus
occidentalis]
Length = 282
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 71 GDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSKTSEEL-KRK 129
GDA V D QK + RA+RFG+PV E+ + + S + S V+K++E+L K +
Sbjct: 166 GDAPEV-DKQKLLDRAKRFGIPVG---EDGKQAKETPVPKASAIKPSPVAKSAEDLEKLR 221
Query: 130 ARAERFG 136
RAERFG
Sbjct: 222 KRAERFG 228
>gi|225705062|gb|ACO08377.1| Nuclear protein Hcc-1 [Oncorhynchus mykiss]
Length = 217
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 84 RRAERFGM---PVQMSEE--EKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFG 136
+RAERFGM PV + E EK R ERFG T + V E+K++ RAERFG
Sbjct: 160 KRAERFGMNVSPVAKTVEVDEKLKKRKERFGI--LTAAAAVGAEDSEVKKRKRAERFG 215
>gi|338720411|ref|XP_001917598.2| PREDICTED: LOW QUALITY PROTEIN: voltage-dependent N-type calcium
channel subunit alpha-1B-like [Equus caballus]
Length = 2233
Score = 38.9 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 25/114 (21%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSEVSK------------TS 123
VT K +RR R G P + +E E R RA R +G ++ +
Sbjct: 817 VTMVFKSVRRRHRRGSPEEAAEREPRRHRAHRLAPDQGKEGERRARHRGPRAGPREAESG 876
Query: 124 EELKRKARAERFGLPVPSSVSEEEAKRKARLARFAPYPKTDSVEEDKRKARALR 177
EE R+ RA LP +E A+R++ + ED+ K + LR
Sbjct: 877 EEPARRHRARHKALPAHEDAEKEAAERESGV-------------EDRDKDKELR 917
>gi|229367574|gb|ACQ58767.1| Nuclear protein Hcc-1 [Anoplopoma fimbria]
Length = 210
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
Query: 84 RRAERFGMPV-----QMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFG 136
+RAERFG+ V ++ E+EK R ERFG + G+ V E K+ RAERFG
Sbjct: 154 KRAERFGINVSSVTQKIEEDEKLKKRKERFGVSA---GAVVGSAEVEAKKVKRAERFG 208
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 16/92 (17%)
Query: 77 TDTQKKIRRAERFGMPVQMSEEEKRNTRAERFG----TGSKTQG----SEVSKTSEELKR 128
+ T++ +RAERF +P + E K+ RA RFG S T G S+ ++LK+
Sbjct: 97 SSTERLQKRAERFSIPA--TAESKKAIRAARFGESTENSSPTPGVVANSKAPVNVDQLKK 154
Query: 129 KARAERFGLPVPSSVS---EEEAKRKARLARF 157
RAERFG+ V SSV+ EE+ K K R RF
Sbjct: 155 --RAERFGINV-SSVTQKIEEDEKLKKRKERF 183
>gi|66773130|ref|NP_001019578.1| SAP domain-containing ribonucleoprotein [Danio rerio]
gi|63102352|gb|AAH95082.1| Zgc:109957 [Danio rerio]
gi|182889378|gb|AAI65010.1| Zgc:109957 protein [Danio rerio]
Length = 204
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 22/144 (15%)
Query: 51 KKNGNDSKTAVTITAVSP----VSGDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAE 106
K+ D K ++ T + P V + +V D ++ +RAERF +P ++ + K+ RA
Sbjct: 64 KEESTDKKEELSPTGMEPEKKLVKLNPPVVAD-ERLQKRAERFNVP--LTGDNKKAARAA 120
Query: 107 RFGT----GSKTQGSEVSKTSEELKRKARAERFGLPVPSSVS---EEEAKRKARLARFAP 159
RFG SK ++ + E LK+ RAERFG+ V SSVS E++ K K R RF
Sbjct: 121 RFGVTAPESSKGASTKTNVDVEVLKK--RAERFGMNV-SSVSKKVEDDEKLKKRKERFGI 177
Query: 160 YPKTDSV-----EEDKRKARALRF 178
S E K++ RA RF
Sbjct: 178 VTSASSSGGGDDSEAKKRKRAERF 201
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 84 RRAERFGMPV-----QMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFG 136
+RAERFGM V ++ ++EK R ERFG + S SE KRK RAERFG
Sbjct: 146 KRAERFGMNVSSVSKKVEDDEKLKKRKERFGIVTSASSSGGGDDSEAKKRK-RAERFG 202
>gi|225705664|gb|ACO08678.1| Nuclear protein Hcc-1 [Oncorhynchus mykiss]
Length = 211
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEE---------------EKRNTRAERFGTGSKTQGSEVS 120
+ D++K IR A RFG+PV E+ RAERFG S VS
Sbjct: 114 LADSKKAIR-AARFGLPVAAPPTSTTGVTVNKSTPVSVEQLKKRAERFGGNV----SSVS 168
Query: 121 KTSEE-LKRKARAERFGLPVPSSVSEEEAKRKARLARF 157
K EE K K R ERFG+ + ++ EAK++ R RF
Sbjct: 169 KKVEEDEKLKKRKERFGILTGAVATDIEAKKQKRSERF 206
>gi|225704268|gb|ACO07980.1| Nuclear protein Hcc-1 [Oncorhynchus mykiss]
Length = 211
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 56/127 (44%), Gaps = 34/127 (26%)
Query: 58 KTAVTITAVSPVSGDADL-----------VTDTQKKIRRAERFGMPVQMSEE-------- 98
K V IT PVS D L + D++K IR A RFG+PV
Sbjct: 87 KKVVKIT--PPVSVDERLQKRADRFNVPALADSKKAIR-AARFGLPVAAPPTSTTGVTVN 143
Query: 99 -------EKRNTRAERFGTGSKTQGSEVSKTSEE-LKRKARAERFGLPVPSSVSEEEAKR 150
E+ RAERFG S VSK EE K K R ERFG+ + ++ EAK+
Sbjct: 144 KSTPVSVEQLKKRAERFGGNV----SSVSKKVEEDEKPKKRKERFGILTGAVATDIEAKK 199
Query: 151 KARLARF 157
+ R RF
Sbjct: 200 QKRSERF 206
>gi|225707378|gb|ACO09535.1| Nuclear protein Hcc-1 [Osmerus mordax]
Length = 214
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 23/96 (23%)
Query: 81 KKIRRAERFGMPVQ----------------MSEEEKRNTRAERFGTGSKTQGSEVSKTSE 124
KK RA RFG+PV M E+ RAERFG + +V + +
Sbjct: 120 KKAIRAARFGLPVTSPSPPGGVSLNSKTPVMVSAEQLKKRAERFGGNVSSISKKVEEDEK 179
Query: 125 ELKRKARAERFGLP---VPSSVSEEEAKRKARLARF 157
+KRK ERFG+ VP+S ++ EAK++ R RF
Sbjct: 180 LIKRK---ERFGVQTSGVPAS-ADVEAKKQKRSERF 211
>gi|294933691|ref|XP_002780820.1| hypothetical protein Pmar_PMAR026223 [Perkinsus marinus ATCC 50983]
gi|239890900|gb|EER12615.1| hypothetical protein Pmar_PMAR026223 [Perkinsus marinus ATCC 50983]
Length = 63
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 71 GDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGT 110
G DL +T +K+ RA+RFG+ +E EK+ TR+ RFGT
Sbjct: 24 GTEDLDEETARKLERAQRFGLVTADTEAEKKRTRSLRFGT 63
Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 119 VSKTSEELKRKARAERFGLPVPSS--VSEEEAKRKARLARFAPYPKTDSVEEDKRKARAL 176
V++ SE+ KRKAR+ERFG + + EE A++ R RF T E +K++ R+L
Sbjct: 2 VNEESEQAKRKARSERFGKDAKGTEDLDEETARKLERAQRFGLV--TADTEAEKKRTRSL 59
Query: 177 RF 178
RF
Sbjct: 60 RF 61
>gi|393230363|gb|EJD37970.1| hypothetical protein AURDEDRAFT_187883 [Auricularia delicata
TFB-10046 SS5]
Length = 302
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 95 MSEEEKRNTRAERFGTGSKTQGSEVSKTSEEL-KRKARAERFGL 137
+ + EK N RA RFG T + + +E+L K KARA RFGL
Sbjct: 206 IDDPEKLNARAARFGLKPDTSSAPATSAAEDLEKLKARAARFGL 249
>gi|350412100|ref|XP_003489541.1| PREDICTED: SAP domain-containing ribonucleoprotein-like [Bombus
impatiens]
Length = 248
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Query: 85 RAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSE------VSKTSEELKRKARAERFGLP 138
RA++FG+P +SE K+ R+ RF ++ S V T E LK+ RAERFG
Sbjct: 153 RAKKFGLP--LSEAAKKEARSARFSINNQNNKSAASVKTPVHTTYEVLKK--RAERFGTS 208
Query: 139 VPSSVSEEEA-----KRKARLARFAP 159
V S + + E KRK R P
Sbjct: 209 VSSLMEKAELEARIEKRKVRFGEVKP 234
>gi|221221800|gb|ACM09561.1| Nuclear protein Hcc-1 [Salmo salar]
Length = 212
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 84 RRAERFGM---PVQMSEE--EKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFG 136
+RAERFGM PV + E EK R ERFG T + V E K++ RAERFG
Sbjct: 155 KRAERFGMNVSPVAKTVEVDEKLKKRKERFGI--LTAAAAVGAEDSEAKKRKRAERFG 210
>gi|340727594|ref|XP_003402125.1| PREDICTED: SAP domain-containing ribonucleoprotein-like [Bombus
terrestris]
Length = 248
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Query: 85 RAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSE------VSKTSEELKRKARAERFGLP 138
RA++FG+P +SE K+ R+ RF ++ S V T E LK+ RAERFG
Sbjct: 153 RAKKFGLP--LSEAAKKEARSARFSINNQNNKSAASVKTPVHTTYEVLKK--RAERFGTS 208
Query: 139 VPSSVSEEEA-----KRKARLARFAP 159
V S + + E KRK R P
Sbjct: 209 VSSLMEKAELEARIEKRKVRFGEVKP 234
>gi|221221362|gb|ACM09342.1| Nuclear protein Hcc-1 [Salmo salar]
Length = 211
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 84 RRAERFGM---PVQMSEE--EKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFG 136
+RAERFGM PV + E EK R ERFG T + V E K++ RAERFG
Sbjct: 154 KRAERFGMNVSPVAKTVEVDEKLKKRKERFGI--LTAAAAVGAEDSEAKKRKRAERFG 209
>gi|209735748|gb|ACI68743.1| Nuclear protein Hcc-1 [Salmo salar]
gi|221219668|gb|ACM08495.1| Nuclear protein Hcc-1 [Salmo salar]
gi|303664189|gb|ADM16135.1| Nuclear protein Hcc-1 [Salmo salar]
Length = 212
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 84 RRAERFGM---PVQMSEE--EKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFG 136
+RAERFGM PV + E EK R ERFG T + V E K++ RAERFG
Sbjct: 155 KRAERFGMNVSPVAKTVEVDEKLKKRKERFGI--LTAAAAVGAEDSEAKKRKRAERFG 210
>gi|148692681|gb|EDL24628.1| mCG18674, isoform CRA_b [Mus musculus]
Length = 162
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGTGS---KTQGSEVSKTSE-ELKRKAR 131
+ T++ +RAERF +PV + E K+ RA RFG S K S+ SE + K K R
Sbjct: 91 IPQTERMQKRAERFNVPVSL--ESKKAARAARFGISSVPTKGLSSDTKPMSEDDEKLKKR 148
Query: 132 AERFGL 137
ERFG+
Sbjct: 149 KERFGI 154
>gi|221219860|gb|ACM08591.1| Nuclear protein Hcc-1 [Salmo salar]
Length = 211
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 84 RRAERFGM---PVQMSEE--EKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFG 136
+RAERFGM PV + E EK R ERFG T + V E K++ RAERFG
Sbjct: 154 KRAERFGMNVSPVAKTVEVDEKLKKRKERFGI--LTAAAAVGAEDSEAKKRKRAERFG 209
>gi|403354284|gb|EJY76698.1| hypothetical protein OXYTRI_01783 [Oxytricha trifallax]
Length = 185
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 25/85 (29%)
Query: 67 SPVSGDADLVTDTQKKIRRAERFG--------------MPVQMSEEEKRNTRAERFGTGS 112
SP S +TD +K+ R +RFG + +Q E +KR RA++FG
Sbjct: 15 SPTS-----LTDAEKRKLRLQRFGNSNAQNPNLTTQDALKMQNEELQKRLERAKKFGL-- 67
Query: 113 KTQGSEVSKTSEELKRKARAERFGL 137
+ SK ++LK + RAERFG+
Sbjct: 68 ----EDSSKDCQKLKLQQRAERFGI 88
>gi|321252658|ref|XP_003192482.1| hypothetical protein CGB_B9160C [Cryptococcus gattii WM276]
gi|317458950|gb|ADV20695.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 732
Score = 38.1 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 101 RNTRAE---RFGTGSKTQGSEVSKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARF 157
R RAE S Q E + ++ KR ER+GLP+P SV +EE + +A + +
Sbjct: 628 RTLRAEISLALPDSSHAQTQEAADEAQARKRHLLEERYGLPIPDSVLKEEEEEQANMQQG 687
Query: 158 APYPKTDSVEEDKRKAR 174
+ D EE++ +A+
Sbjct: 688 Q---ELDMSEEERERAK 701
>gi|119617243|gb|EAW96837.1| hCG2016179, isoform CRA_d [Homo sapiens]
Length = 192
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 19/97 (19%)
Query: 76 VTDTQKKIRRAERFGMPVQMSEE----------EKRNTRAERFGTGSKTQGSEVSKTSE- 124
+ T++ +RAERF +PV + + +K RA+RFG S +S+ SE
Sbjct: 97 IPQTERMQKRAERFNVPVSLESKKAARAARVNLDKLKERAQRFGLNV----SSISRKSED 152
Query: 125 ELKRKARAERFGLPVPS----SVSEEEAKRKARLARF 157
+ K K R ERFG+ S + + EAK++ R RF
Sbjct: 153 DEKLKKRKERFGIVTSSAGTGTTEDTEAKKRKRAERF 189
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 85 RAERFGMPV-----QMSEEEKRNTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGL 137
RA+RFG+ V + ++EK R ERFG + + G+ ++ +E KRK RAERFG+
Sbjct: 135 RAQRFGLNVSSISRKSEDDEKLKKRKERFGIVTSSAGTGTTEDTEAKKRK-RAERFGI 191
>gi|328780739|ref|XP_623549.2| PREDICTED: SAP domain-containing ribonucleoprotein-like isoform 1
[Apis mellifera]
gi|380028407|ref|XP_003697894.1| PREDICTED: LOW QUALITY PROTEIN: SAP domain-containing
ribonucleoprotein-like [Apis florea]
Length = 248
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Query: 85 RAERFGMPVQMSEEEKRNTRAERFGTGSKTQGSE------VSKTSEELKRKARAERFGLP 138
RA++FG+P +SE K+ R+ RF ++ S V T E LK+ RAERFG
Sbjct: 153 RAKKFGLP--LSEAAKKEARSARFSINNQNSKSAASVKTPVHTTYEVLKK--RAERFGTS 208
Query: 139 VPSSVSEEEA-----KRKARLARFAP 159
V S + + E KRK R P
Sbjct: 209 VSSLMEKAELEARIEKRKVRFGEVKP 234
>gi|320168198|gb|EFW45097.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 244
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 34/138 (24%)
Query: 72 DADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFGT--------GSKTQGSEVSKTS 123
D+ +D ++K+ RA+RFG+ ++S E K RA +FG +K G S
Sbjct: 112 DSTEASDLERKLARAKRFGL--EVSTETKLAMRAAKFGAPVAPSPVGANKASGKAASSKR 169
Query: 124 EELKRKA--------------------RAERFGLPVPS-SVSEEEAKRKARLARFAPYPK 162
+ +A RA RFG P + EEEAKR++R RFA
Sbjct: 170 SNVAAQAIQAAAAASAAAGTSPQDLANRAARFGTISPLLAKQEEEAKRESRKQRFA---S 226
Query: 163 TDSVEEDKRKARALRFSK 180
DS E K+++R RF+K
Sbjct: 227 GDSETEAKKQSRLERFAK 244
>gi|67622272|ref|XP_667802.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54658964|gb|EAL37568.1| hypothetical protein Chro.30173 [Cryptosporidium hominis]
Length = 124
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 43 VNSSAVEVKKNGNDSKTAVTITAVSPVS-GDADLVTDTQKKIRRAERFGMPVQMSEEEKR 101
+N+S+ EVK + + +++ + D + +++ ++ R ++FG +E EKR
Sbjct: 1 MNTSSNEVKTDQGEKNVSISEPVRQTICISDVNQLSEKERIELRRQKFGACGPSTEAEKR 60
Query: 102 NTRAERFGTGSKTQGSEVSKTSEELKRKARAERFGLPVPSSVSEEEAKRKARLARFAPYP 161
R++R G SE+ KRK R ERFG+ +SE + K K R RF
Sbjct: 61 LARSKRLGAA-----------SEDDKRKLRQERFGM-----ISEAD-KIKNRRERFGTMS 103
Query: 162 KT-DSVEEDKRKARALRF 178
+ D E K + R LRF
Sbjct: 104 RVNDPDHEKKIQVRKLRF 121
>gi|221220770|gb|ACM09046.1| Nuclear protein Hcc-1 [Salmo salar]
Length = 211
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 11/60 (18%)
Query: 84 RRAERFGMPVQ-----MSEEEKRNTRAERFG--TGSKTQGSEVSKTSEELKRKARAERFG 136
+RAERFGM V + +EK R ERFG T + G+E S E K++ RAERFG
Sbjct: 154 KRAERFGMNVSSVAKTVEVDEKLKKRKERFGILTAAAVVGAEDS----EAKKRKRAERFG 209
>gi|209732716|gb|ACI67227.1| Nuclear protein Hcc-1 [Salmo salar]
gi|303666482|gb|ADM16231.1| Nuclear protein Hcc-1 [Salmo salar]
Length = 212
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 11/60 (18%)
Query: 84 RRAERFGMPVQ-----MSEEEKRNTRAERFG--TGSKTQGSEVSKTSEELKRKARAERFG 136
+RAERFGM V + +EK R ERFG T + G+E S E K++ RAERFG
Sbjct: 155 KRAERFGMNVSSVAKTVEVDEKLKKRKERFGILTAAAVVGAEDS----EAKKRKRAERFG 210
>gi|209732280|gb|ACI67009.1| Nuclear protein Hcc-1 [Salmo salar]
Length = 211
Score = 36.2 bits (82), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 47/99 (47%), Gaps = 27/99 (27%)
Query: 78 DTQKKIRRAERFGM------------------PVQMSEEEKRNTRAERFGTGSKTQGSEV 119
D++K IR A RFG+ PV + E+ RAERFG S V
Sbjct: 116 DSKKAIR-AARFGLSAAAPPTSTTGVTVNKSTPVSV---EQLKKRAERFGGNV----SSV 167
Query: 120 SKTSEE-LKRKARAERFGLPVPSSVSEEEAKRKARLARF 157
SK EE K K R ERFG+ + ++ EAK++ R RF
Sbjct: 168 SKKVEEDEKLKKRKERFGILTGAVATDVEAKKQKRSERF 206
>gi|19075396|ref|NP_587896.1| RNA binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|27151718|sp|O74871.1|YCW3_SCHPO RecName: Full=Uncharacterized protein C31H12.03c
gi|3702627|emb|CAA21220.1| RNA binding protein (predicted) [Schizosaccharomyces pombe]
Length = 245
Score = 36.2 bits (82), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 6/54 (11%)
Query: 56 DSKTAVTITAVSPVSGDADLVTDTQKKIRRAERFGMPVQMSEEEKRNTRAERFG 109
+SK +V+ SP D+ + +K I+RA+RFG+PV E+ K+ RA RFG
Sbjct: 128 ESKQSVSNEVSSP-----DVAKEQEKLIQRAKRFGIPVD-DEQIKKAARAARFG 175
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.303 0.119 0.306
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,005,973,892
Number of Sequences: 23463169
Number of extensions: 119866230
Number of successful extensions: 338208
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 1226
Number of HSP's that attempted gapping in prelim test: 334437
Number of HSP's gapped (non-prelim): 3407
length of query: 210
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 74
effective length of database: 9,168,204,383
effective search space: 678447124342
effective search space used: 678447124342
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 73 (32.7 bits)