Query 028343
Match_columns 210
No_of_seqs 195 out of 1414
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 16:30:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028343.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028343hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dtg_A Branched-chain amino ac 100.0 1E-50 3.4E-55 359.0 24.6 210 1-210 147-372 (372)
2 4dqn_A Putative branched-chain 100.0 7.2E-51 2.5E-55 356.6 23.1 209 1-210 127-344 (345)
3 3dth_A Branched-chain amino ac 100.0 1.4E-50 4.9E-55 357.3 24.9 210 1-210 147-372 (372)
4 3u0g_A Putative branched-chain 100.0 4.2E-50 1.5E-54 349.7 23.4 204 1-209 118-328 (328)
5 1iye_A Branched-chain amino ac 100.0 8.2E-49 2.8E-53 338.7 23.0 205 1-209 95-307 (309)
6 3uzo_A Branched-chain-amino-ac 100.0 4.5E-49 1.6E-53 346.6 20.4 207 1-209 142-358 (358)
7 2eiy_A ILVE, branched-chain am 100.0 2.9E-48 1E-52 335.2 23.8 204 1-209 94-305 (308)
8 2a1h_A Branched chain aminotra 100.0 3.3E-48 1.1E-52 342.2 23.9 207 1-209 140-365 (365)
9 2coi_A Branched chain aminotra 100.0 1.7E-47 6E-52 339.5 23.7 208 1-210 160-386 (386)
10 1i2k_A 4-amino-4-deoxychorisma 100.0 3.1E-44 1E-48 304.6 20.1 185 1-193 77-267 (269)
11 2xpf_A 4-amino-4-deoxychorisma 100.0 5.2E-44 1.8E-48 306.8 20.1 185 2-194 99-289 (292)
12 3daa_A D-amino acid aminotrans 100.0 5.6E-43 1.9E-47 298.4 20.1 185 2-195 86-276 (277)
13 3lul_A 4-amino-4-deoxychorisma 100.0 1.9E-42 6.4E-47 294.4 19.2 183 2-197 85-269 (272)
14 3csw_A BCAT, putative branched 100.0 9.3E-42 3.2E-46 291.9 18.0 187 1-207 96-284 (285)
15 3sno_A Hypothetical aminotrans 100.0 3.6E-41 1.2E-45 291.9 14.3 180 1-194 107-313 (315)
16 3qqm_A MLR3007 protein; struct 100.0 3.5E-36 1.2E-40 248.6 12.2 148 1-166 71-220 (221)
17 2zgi_A Putative 4-amino-4-deox 100.0 1.7E-35 5.9E-40 248.0 12.4 147 1-168 79-229 (246)
18 3ceb_A D-aminoacid aminotransf 100.0 9.7E-30 3.3E-34 205.8 10.7 100 51-161 95-194 (194)
19 2lqo_A Putative glutaredoxin R 56.0 27 0.00092 23.6 5.5 48 125-174 20-67 (92)
20 3mcb_B Transcription factor BT 48.5 27 0.00094 21.9 4.1 43 77-121 5-55 (58)
21 3lkx_A Transcription factor BT 45.5 26 0.00088 22.6 3.7 44 77-122 5-56 (66)
22 2lfw_B NEPR anti sigma factor; 42.8 20 0.00069 22.8 2.8 25 179-203 24-48 (62)
23 2l09_A ASR4154 protein; proto- 40.8 16 0.00056 23.2 2.2 36 116-155 19-54 (62)
24 3msz_A Glutaredoxin 1; alpha-b 39.5 55 0.0019 20.5 4.9 48 124-174 19-72 (89)
25 2qho_B E3 ubiquitin-protein li 35.1 15 0.00052 22.3 1.2 22 115-136 18-39 (53)
26 3tql_A Arginine-binding protei 31.2 60 0.002 23.8 4.5 35 114-148 21-55 (227)
27 2kyr_A Fructose-like phosphotr 30.0 32 0.0011 24.5 2.5 45 114-158 16-70 (111)
28 4gf0_A Glutathione S-transfera 29.4 93 0.0032 23.3 5.4 60 128-191 20-79 (215)
29 3h7m_A Sensor protein; histidi 28.3 58 0.002 24.1 4.0 36 113-148 29-64 (234)
30 2kru_A Light-independent proto 28.0 34 0.0012 21.8 2.1 35 117-155 21-55 (63)
31 4h5g_A Amino acid ABC superfam 26.8 43 0.0015 25.6 3.0 35 114-148 34-68 (243)
32 4gvo_A LMO2349 protein; struct 26.3 58 0.002 24.9 3.7 36 113-148 27-63 (243)
33 2y7i_A STM4351; arginine-bindi 25.2 81 0.0028 23.2 4.3 35 114-148 25-59 (229)
34 4f3p_A Glutamine-binding perip 24.5 59 0.002 24.6 3.4 35 114-148 42-76 (249)
35 1axd_A Glutathione S-transfera 23.7 1.4E+02 0.0049 21.8 5.5 59 128-191 20-78 (209)
36 3kzg_A Arginine 3RD transport 23.2 94 0.0032 23.2 4.4 36 113-148 22-57 (237)
37 2r4q_A Phosphotransferase syst 22.4 46 0.0016 23.4 2.1 45 114-158 13-67 (106)
38 4iel_A Glutathione S-transfera 22.1 1.8E+02 0.0061 21.9 5.8 59 128-191 41-99 (229)
39 3zua_A CLD, alpha-hemolysin tr 21.8 77 0.0026 22.5 3.4 32 118-149 44-75 (142)
40 2r48_A Phosphotransferase syst 21.7 46 0.0016 23.4 2.0 45 114-158 13-67 (106)
41 4eq9_A ABC transporter substra 21.7 66 0.0023 24.0 3.2 39 110-148 19-61 (246)
42 1gnw_A Glutathione S-transfera 21.7 1.6E+02 0.0056 21.5 5.4 61 126-191 18-78 (211)
43 2q88_A EHUB, putative ABC tran 21.5 1.1E+02 0.0039 23.0 4.6 35 114-148 31-66 (257)
44 3i6v_A Periplasmic His/Glu/Gln 21.5 88 0.003 23.5 3.9 35 114-148 24-58 (232)
45 1r5a_A Glutathione transferase 21.0 2.2E+02 0.0077 21.0 6.2 62 125-191 17-78 (218)
46 3bzy_B ESCU; auto cleavage pro 21.0 53 0.0018 21.9 2.1 30 118-147 25-54 (83)
47 3ein_A GST class-theta, glutat 21.0 1.8E+02 0.006 21.4 5.5 59 128-191 19-77 (209)
48 2bmv_A Flavodoxin; electron tr 20.8 55 0.0019 23.8 2.4 45 118-163 12-61 (164)
49 2h8b_A Insulin-like 3; insulin 20.7 12 0.00041 19.3 -0.9 16 114-129 9-24 (26)
50 3v7e_A Ribosome-associated pro 20.5 1.3E+02 0.0045 19.5 4.0 33 120-153 40-72 (82)
51 4dz1_A DALS D-alanine transpor 20.3 1.2E+02 0.0042 23.0 4.6 35 114-148 48-82 (259)
52 2fz5_A Flavodoxin; alpha/beta 20.2 95 0.0033 21.3 3.6 42 118-159 10-57 (137)
No 1
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=1e-50 Score=358.96 Aligned_cols=210 Identities=36% Similarity=0.661 Sum_probs=190.1
Q ss_pred CeEEEEEEecCCCcCcCCCCCcEEEEEEEecCCCcC---CceEEEEEeeeeecCCCCCCCCccccChHHHHHHHHHHHHC
Q 028343 1 MYIRPLLMGSGPVLGVAPASEYTFITYASPVGNYHK---GLLNLIVEEKFRRAIPGGTGGVKAVTNYAIIYKPIAEAKAK 77 (210)
Q Consensus 1 ~yiR~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~~~---~g~~~~~~~~~~r~~~~~l~~~K~~~~y~~~~~a~~ea~~~ 77 (210)
+||||+++++.+.+|+.|+.++.++++++|.++++. .+..+.++....|..|......|..+||+++++++++|+++
T Consensus 147 ~YiRp~~~~~~~~lgv~p~~~~~~~ii~~p~~~~~~~~~~~~~~~~~~~~~R~~p~~~~~~K~~gNY~~~~la~~eA~~~ 226 (372)
T 3dtg_A 147 LYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEM 226 (372)
T ss_dssp EEEEEEEEECCCCCSCSCCSEEEEEEEEEEESCSSTTSSSCEEEEECSSCCSCCTTSSTTSCCHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEEeecCccCcCCCCCceeeeEecccccccccCcccceeecccceeecCcCCcchHHhcCCcchhhhHHHHHHhc
Confidence 599999999988999999888999999999887765 34455555567788888888888888999999999999999
Q ss_pred CCCeEEEEc--CCCcEEEeCceEEEEE----ECCEEEccCCCCCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhhh--
Q 028343 78 GFTDVLFLN--AEKYIEEVSTSNIFLV----KGNEISTPPTSGTILPGITRKSIIEITHVLGYQVKERAIPVEELFDA-- 149 (210)
Q Consensus 78 g~deal~ld--~~g~v~E~~~sNlf~~----~~~~l~TP~l~~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~a-- 149 (210)
|+||+||+| .+|+|+|++++|+|+| +||+++|||++.++|+||||+.||++|+++|++|+|++++++||..|
T Consensus 227 G~deal~Ld~~~~g~V~E~~~sNiF~V~~~~kdg~liTPpl~~~iL~GITR~sVi~LA~~~Gi~V~Er~it~~El~~A~~ 306 (372)
T 3dtg_A 227 GCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAG 306 (372)
T ss_dssp TCSEEEEECTTTSCBEEEETTEEEEEEESCGGGCEEEECCCCSSSCCCHHHHHHHHHHHHHTCEEEECCCBHHHHHHHHH
T ss_pred CcchhhhhccccccceeecCceEEEEEEecCCCceEEeCCccccccccHHHHHHHHHHHHCCceEEEEeCCHHHHHHHhh
Confidence 999999999 4788999999999999 67899999999999999999999999999999999999999999998
Q ss_pred ----hhhhhcccccceEEEEEEEecCeEEee-cCCccHHHHHHHHHHHHhHccCCCCCCCCeEeCC
Q 028343 150 ----EEVFCTGTAVGVNSVNSITYQDERIEY-KRGAGTVGQKLYEMVTGIQTGRIEDKMGWTVELD 210 (210)
Q Consensus 150 ----de~f~tns~~gi~pV~~I~~~~~~i~~-~~~~g~~t~~L~~~~~~~~~g~~~~~~~w~~~~~ 210 (210)
||+|+|||+.+|+||.+|+..+..+.+ +|++||+|++|+++|.+||+|+.+|+++|+++|+
T Consensus 307 ~~~~dEvF~tGTaa~I~PV~~Id~~~~~~~ig~G~~Gpvt~~L~~~~~~iq~G~~~d~~~W~~~v~ 372 (372)
T 3dtg_A 307 AGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEITMALRDTLTGIQRGTFADTHGWMARLN 372 (372)
T ss_dssp HTSEEEEEEEETTTEEEEEEEEEETTEEEECTTSSCCHHHHHHHHHHHHHHTTSSCCTTCCEEECC
T ss_pred cCCCcEEEECCCcceEEEEEEEecCCceEEcCCCCcCHHHHHHHHHHHHHHCCCCCCCCCCcEeCC
Confidence 999999999999999999876554333 4679999999999999999999999999999996
No 2
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans}
Probab=100.00 E-value=7.2e-51 Score=356.63 Aligned_cols=209 Identities=38% Similarity=0.646 Sum_probs=191.5
Q ss_pred CeEEEEEEecCCCcCcCCCCCcEEEEEEEecCCCcC---CceEEEEEeeeeecCCCCCCCCccccChHHHHHHHHHHHHC
Q 028343 1 MYIRPLLMGSGPVLGVAPASEYTFITYASPVGNYHK---GLLNLIVEEKFRRAIPGGTGGVKAVTNYAIIYKPIAEAKAK 77 (210)
Q Consensus 1 ~yiR~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~~~---~g~~~~~~~~~~r~~~~~l~~~K~~~~y~~~~~a~~ea~~~ 77 (210)
+||||+++|+.+.+|+.|+.+++++|+++|+++++. +|+++.++++++|..++.++++|+..||+++++|+++|+++
T Consensus 127 ~yiR~~v~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~~~~gv~l~~~~~~~R~~~~~~~~~Kt~~nyl~~vla~~eA~~~ 206 (345)
T 4dqn_A 127 LYLRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGLAPTNFLIQDDYDRAAPHGTGAAKVGGNYAASLLPGKVAHER 206 (345)
T ss_dssp EEEEEEEEEESCCCSSCCCSEEEEEEEEEEECCSCTTSCCCEEEEECTTCCSSCTTSSTTSCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEEeCCCccCCCCCCCeEEEEEEEECccccccCCCCEEEEEccceEecCCCccccccccccCHHHHHHHHHHHHC
Confidence 499999999888899988778999999999987654 78999988657898888899999945999999999999999
Q ss_pred CCCeEEEEcC--CCcEEEeCceEEEEE-ECCEEEccCCCCCCcccchHHHHHHHHHH-cCCcEEEEecCHHHHhhhhhhh
Q 028343 78 GFTDVLFLNA--EKYIEEVSTSNIFLV-KGNEISTPPTSGTILPGITRKSIIEITHV-LGYQVKERAIPVEELFDAEEVF 153 (210)
Q Consensus 78 g~deal~ld~--~g~v~E~~~sNlf~~-~~~~l~TP~l~~~~L~GitR~~vl~~a~~-~gi~v~e~~i~~~el~~ade~f 153 (210)
|+||+||+|. +|+|+|++++|+|++ +||+|+||+ +.++|+||||+.||++|++ +|++|+|++++++||.+|||+|
T Consensus 207 G~de~l~ld~~~~g~v~E~~~sNif~v~~~g~l~TP~-~~~iL~GitR~~vl~la~~~~g~~v~e~~i~~~el~~adevf 285 (345)
T 4dqn_A 207 QFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITPL-SPSILPSVTKYSLLYLAEHRFGMKAIEGDVCVDELDKFVEAG 285 (345)
T ss_dssp TCSCEEEECTTTSCBEEEETTEEEEEEETTCEEEECC-CTTSCCCHHHHHHHHHHHHTTCCEEEECCCBTTCGGGEEEEE
T ss_pred CCCEEEEEcCCCCCeEEEcCCceEEEEecCCEEEeCC-CCCccHHHHHHHHHHHHHhccCCeEEEEeCCHHHHHhhhHHh
Confidence 9999999998 699999999999998 899999999 9999999999999999999 9999999999999999999999
Q ss_pred hcccccceEEEEEEEecCeEEeec-C-CccHHHHHHHHHHHHhHccCCCCCCCCeEeCC
Q 028343 154 CTGTAVGVNSVNSITYQDERIEYK-R-GAGTVGQKLYEMVTGIQTGRIEDKMGWTVELD 210 (210)
Q Consensus 154 ~tns~~gi~pV~~I~~~~~~i~~~-~-~~g~~t~~L~~~~~~~~~g~~~~~~~w~~~~~ 210 (210)
+|||+.+|+||.+|+..++.+.+. + ++||+|++|+++|.++++|+.+|+++|+++|+
T Consensus 286 ~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt~~L~~~~~~i~~g~~~~~~~W~~~v~ 344 (345)
T 4dqn_A 286 ACGTAAVISPIGGVQHGDDFHVFYSETEVGPVTHKLYDELTGIQFGDVKAPEGWIYKVD 344 (345)
T ss_dssp EEETTTEEEEEEEEEETTEEEESSCSSSCCHHHHHHHHHHHHHHTTSSCCCTTCEEETT
T ss_pred hhcchhHEEEEEEECcccceeeeCCCCCcCHHHHHHHHHHHHHHcCCCCCCCCCceECC
Confidence 999999999999998555544343 3 48999999999999999999999999999986
No 3
>3dth_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP OBZ; 1.85A {Mycobacterium smegmatis} PDB: 3dtf_A* 3dtg_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=1.4e-50 Score=357.34 Aligned_cols=210 Identities=37% Similarity=0.672 Sum_probs=194.1
Q ss_pred CeEEEEEEecCCCcCcCCCCCcEEEEEEEecCCCcC---CceEEEEEeeeeecCCCCCCCCccccChHHHHHHHHHHHHC
Q 028343 1 MYIRPLLMGSGPVLGVAPASEYTFITYASPVGNYHK---GLLNLIVEEKFRRAIPGGTGGVKAVTNYAIIYKPIAEAKAK 77 (210)
Q Consensus 1 ~yiR~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~~~---~g~~~~~~~~~~r~~~~~l~~~K~~~~y~~~~~a~~ea~~~ 77 (210)
+||||+++++++.+|+.|+.+++++|+++|.++++. +|+++.+++++.|..|..++++|+.+||+++++|+++|+++
T Consensus 147 lYiRp~~~~~~~~~G~~p~~~~~~~i~~~p~~~y~~~g~~~v~l~v~~~~~R~~p~g~~~~K~~gNY~~~~la~~eA~~~ 226 (372)
T 3dth_A 147 LYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEM 226 (372)
T ss_dssp EEEEEEEEECCCCSSCSCCSEEEEEEEEEEESCSSSCSSSCEEEEECSSCCSCCTTSSTTSCCHHHHHTTHHHHHHHHHT
T ss_pred EEEEEEEEcCCCcCCcCCCCCeEEEEEEeeCchhhccCCccEEEEEccceeccCCCcccchhhHhhhHHHHHHHHHHHHc
Confidence 599999998888889998888999999999988765 58899887668898888899999867999999999999999
Q ss_pred CCCeEEEEcC--CCcEEEeCceEEEEEECC----EEEccCCCCCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhhh--
Q 028343 78 GFTDVLFLNA--EKYIEEVSTSNIFLVKGN----EISTPPTSGTILPGITRKSIIEITHVLGYQVKERAIPVEELFDA-- 149 (210)
Q Consensus 78 g~deal~ld~--~g~v~E~~~sNlf~~~~~----~l~TP~l~~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~a-- 149 (210)
|+||+||+|. +|+|+|++++|+|+++++ +|+||+++.++|+||||+.||++|+++|++|+|++++++||.+|
T Consensus 227 G~de~l~ld~~~~g~v~E~~~sNif~v~~~~~g~~l~TP~l~~~iL~GITR~~vl~la~~~G~~v~Er~i~~~eL~~a~~ 306 (372)
T 3dth_A 227 GCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAG 306 (372)
T ss_dssp TCSEEEEECTTTSCBEEEETTEEEEEEESCGGGCEEEECCCCSSSCCCHHHHHHHHHHHHHTCEEEECCCBHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCEEEEcCceeEEEEECCCCceEEEECCCCCCcCHHHHHHHHHHHHHHCCCeEEEEECCHHHHHhhhh
Confidence 9999999998 899999999999999998 99999999999999999999999999999999999999999999
Q ss_pred ----hhhhhcccccceEEEEEEEecCeEEeec-CCccHHHHHHHHHHHHhHccCCCCCCCCeEeCC
Q 028343 150 ----EEVFCTGTAVGVNSVNSITYQDERIEYK-RGAGTVGQKLYEMVTGIQTGRIEDKMGWTVELD 210 (210)
Q Consensus 150 ----de~f~tns~~gi~pV~~I~~~~~~i~~~-~~~g~~t~~L~~~~~~~~~g~~~~~~~w~~~~~ 210 (210)
||+|+|||+.+|+||.+|+..++.+.++ +++||+|++|+++|.++++|+.+|++||+++|+
T Consensus 307 ~g~~dEvf~tgTa~~i~PV~~Id~~~~~~~i~~g~~Gpvt~~L~~~l~~iq~g~~~d~~~W~~~v~ 372 (372)
T 3dth_A 307 AGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEITMALRDTLTGIQRGTFADTHGWMARLN 372 (372)
T ss_dssp HTSEEEEEEEETTTEEEEEEEEEETTEEEECTTSSCCHHHHHHHHHHHHHHHTSSCCTTCCEEECC
T ss_pred cCCccEEEEecccceEEEEEEEccCCceEECCCCCcCHHHHHHHHHHHHHHcCCCCCCCCCeEECC
Confidence 9999999999999999998655554343 568999999999999999999999999999985
No 4
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei}
Probab=100.00 E-value=4.2e-50 Score=349.65 Aligned_cols=204 Identities=27% Similarity=0.434 Sum_probs=184.5
Q ss_pred CeEEEEEEecCCCcCcCCCC-CcEEEEEEEecCCCcC-----CceEEEEEeeeeecCCCC-CCCCccccChHHHHHHHHH
Q 028343 1 MYIRPLLMGSGPVLGVAPAS-EYTFITYASPVGNYHK-----GLLNLIVEEKFRRAIPGG-TGGVKAVTNYAIIYKPIAE 73 (210)
Q Consensus 1 ~yiR~~~~g~~~~~g~~~~~-~~~~~i~~~p~~~~~~-----~g~~~~~~~~~~r~~~~~-l~~~K~~~~y~~~~~a~~e 73 (210)
+||||+++++.+.+|+.|+. .++++|++.|+++++. +|+++.++ +++|..++. ++++|+++||+++++|+++
T Consensus 118 ~~iR~~vtrg~~~~g~~p~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~-~~~R~~~~~~~~~~K~t~nyl~~vla~~e 196 (328)
T 3u0g_A 118 CYLRPIIWIGSEKLGVSAKGNTIHVAIAAWPWGAYLGEEGLAKGIRVKTS-SFTRHHVNVSMVRAKASGWYVNSILANQE 196 (328)
T ss_dssp EEEEEEEEECSSCCSTTCCCCCEEEEEEEEECC----HHHHHHCEEEEEC-SSCCCCTTTSCTTSCBGGGHHHHHHHHHH
T ss_pred eEEEEEEEecCCCCCcCCCCCCcEEEEEEEEcCCCCChhhhcCCEEEEEe-eeeecCCCCcccchhhhhhhHHHHHHHHH
Confidence 49999999888888988764 6889999999887643 69999887 467777765 7999955699999999999
Q ss_pred HHHCCCCeEEEEcCCCcEEEeCceEEEEEECCEEEccCCCCCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhhhhhhh
Q 028343 74 AKAKGFTDVLFLNAEKYIEEVSTSNIFLVKGNEISTPPTSGTILPGITRKSIIEITHVLGYQVKERAIPVEELFDAEEVF 153 (210)
Q Consensus 74 a~~~g~deal~ld~~g~v~E~~~sNlf~~~~~~l~TP~l~~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ade~f 153 (210)
|+++|+||+||+|.+|+|+|++++|+|+++||+|+||+++. +|+||||+.|+++|+++|++|+|++++++||.+|||+|
T Consensus 197 A~~~G~~e~l~ld~~g~v~E~~~sNif~v~~g~l~TP~~~~-iL~GitR~~vl~~a~~~g~~v~e~~i~~~eL~~adevf 275 (328)
T 3u0g_A 197 ATADGYDEALLLDVDGYVSEGSGENFFLVNRGKLYTPDLAS-CLDGITRDTVITLAKEAGIEVIEKRITRDEVYTADEAF 275 (328)
T ss_dssp HHHTTCSEEEEECTTSCEEEESSSEEEEEETTEEEECCSSS-SCCCHHHHHHHHHHHHTTCCEEECCCCHHHHHTCSEEE
T ss_pred HHHCCCCEEEEECCCCcEEEcCceeEEEEECCEEEeCCccc-cchHHHHHHHHHHHHHcCCeEEEEeCCHHHHhhCCEEE
Confidence 99999999999999999999999999999999999999987 99999999999999999999999999999999999999
Q ss_pred hcccccceEEEEEEEecCeEEeecCCccHHHHHHHHHHHHhHccCCCCCCCCeEeC
Q 028343 154 CTGTAVGVNSVNSITYQDERIEYKRGAGTVGQKLYEMVTGIQTGRIEDKMGWTVEL 209 (210)
Q Consensus 154 ~tns~~gi~pV~~I~~~~~~i~~~~~~g~~t~~L~~~~~~~~~g~~~~~~~w~~~~ 209 (210)
+|||++||+||++|+ ++.++ ++++||++++|+++|.++++|+.+|+++|+++|
T Consensus 276 ~tns~~~v~PV~~Id--~~~~~-~g~~g~vt~~L~~~~~~~~~g~~~~~~~W~~~v 328 (328)
T 3u0g_A 276 FTGTAAEVTPIRELD--NRTIG-GGARGPITEKLQSAFFDVVNGKSAKHADWLTKI 328 (328)
T ss_dssp EEETTTEEEEEEEET--TEECT-TSSCCHHHHHHHHHHHHHHTTCCSTTGGGEEEC
T ss_pred EEcchhhEEEEEEEC--CEECC-CCCCCHHHHHHHHHHHHHHcCCCCCCCCCceeC
Confidence 999999999999995 77763 566899999999999999999999999999987
No 5
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A*
Probab=100.00 E-value=8.2e-49 Score=338.71 Aligned_cols=205 Identities=33% Similarity=0.540 Sum_probs=186.2
Q ss_pred CeEEEEEEecCCCcCcCCC--CCcEEEEEEEecCCCcC-----CceEEEEEeeeeecCCCC-CCCCccccChHHHHHHHH
Q 028343 1 MYIRPLLMGSGPVLGVAPA--SEYTFITYASPVGNYHK-----GLLNLIVEEKFRRAIPGG-TGGVKAVTNYAIIYKPIA 72 (210)
Q Consensus 1 ~yiR~~~~g~~~~~g~~~~--~~~~~~i~~~p~~~~~~-----~g~~~~~~~~~~r~~~~~-l~~~K~~~~y~~~~~a~~ 72 (210)
.|||++++++.+.+|+.|+ .++++++++.|+++++. +|+++.++ +++|..++. ++++|+++||+.++++++
T Consensus 95 ~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~-~~~r~~~~~~~~~~K~~~ny~~~~la~~ 173 (309)
T 1iye_A 95 AYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVS-SWNRAAPNTIPTAAKAGGNYLSSLLVGS 173 (309)
T ss_dssp EEEEEEEEECSSCSSSSCCTTCCEEEEEEEECCCCTTCTTHHHHCEEEEEC-SSCCCCTTTSCTTSCBGGGHHHHHHHHH
T ss_pred EEEEEEEEeCCCccCCCCCCCCCcEEEEEEEEcCccCCcccccCCeEEEEe-eeeccCCCCCCccccchhhhHHHHHHHH
Confidence 4899999988778888865 37889999999887543 58999887 466776654 589998669999999999
Q ss_pred HHHHCCCCeEEEEcCCCcEEEeCceEEEEEECCEEEccCCCCCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhhhhhh
Q 028343 73 EAKAKGFTDVLFLNAEKYIEEVSTSNIFLVKGNEISTPPTSGTILPGITRKSIIEITHVLGYQVKERAIPVEELFDAEEV 152 (210)
Q Consensus 73 ea~~~g~deal~ld~~g~v~E~~~sNlf~~~~~~l~TP~l~~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ade~ 152 (210)
+|+++|+||+||+|.+|+|+|++++|||+++||+|+||+++.++|+||||+.||++|+++|++|+|++++++||.+|||+
T Consensus 174 ~A~~~G~de~l~ld~~G~V~Egs~sNif~v~~g~l~TP~l~~~iL~GitR~~ll~~a~~~g~~v~E~~i~~~eL~~adev 253 (309)
T 1iye_A 174 EARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEV 253 (309)
T ss_dssp HHHHTTCSEEEEECTTSBEEEETTBEEEEEETTEEEECCGGGTCCCCHHHHHHHHHHHHTTCCEEECCCBTTHHHHCSEE
T ss_pred HHHHcCCCEEEEECCCCcEEEcCceEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHhhCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccceEEEEEEEecCeEEeecCCccHHHHHHHHHHHHhHccCCCCCCCCeEeC
Q 028343 153 FCTGTAVGVNSVNSITYQDERIEYKRGAGTVGQKLYEMVTGIQTGRIEDKMGWTVEL 209 (210)
Q Consensus 153 f~tns~~gi~pV~~I~~~~~~i~~~~~~g~~t~~L~~~~~~~~~g~~~~~~~w~~~~ 209 (210)
|+|||++||+||.+|+ ++.++ .+++||++++|+++|.++++|+.+++++|+++|
T Consensus 254 fltns~~gv~PV~~id--~~~~~-~g~~g~~~~~l~~~~~~~~~g~~~~~~~w~~~v 307 (309)
T 1iye_A 254 FMSGTAAEITPVRSVD--GIQVG-EGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQV 307 (309)
T ss_dssp EEEETTTEEEEEEEET--TEECT-TSSCCHHHHHHHHHHHGGGTTSSCCCSCCEEEC
T ss_pred EEccCCCEEEEEEEEC--CEECC-CCCCCHHHHHHHHHHHHHHcCCCCccCCCCeEC
Confidence 9999999999999995 77753 456899999999999999999999999999987
No 6
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A*
Probab=100.00 E-value=4.5e-49 Score=346.56 Aligned_cols=207 Identities=36% Similarity=0.608 Sum_probs=187.9
Q ss_pred CeEEEEEEecCCCcCcCCCCCcEEEEEEEecCCCcC---CceEEEEEeeeeecCCCCCCCCccccChHHHHHHHHHHHHC
Q 028343 1 MYIRPLLMGSGPVLGVAPASEYTFITYASPVGNYHK---GLLNLIVEEKFRRAIPGGTGGVKAVTNYAIIYKPIAEAKAK 77 (210)
Q Consensus 1 ~yiR~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~~~---~g~~~~~~~~~~r~~~~~l~~~K~~~~y~~~~~a~~ea~~~ 77 (210)
+||||+++++.+.+|+.|+.++.++|+++|.+++++ +|+++.++ +++|..|..++++|+.+||+++++|+++|+++
T Consensus 142 ~yiR~~v~~~~~~~G~~p~~~~~~~i~~~P~~~~~~~g~~~v~l~~~-~~~R~~p~~~~~~K~~~NYl~~vla~~eA~~~ 220 (358)
T 3uzo_A 142 LYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPYFKGGLTPTNFITS-DYDRAAPHGTGAAKVGGNYAASLLPGYEAKKR 220 (358)
T ss_dssp EEEEEEEEEESSCCSSSCCSEEEEEEEEEEECCSSCSSSCCEEEECC-SCCSSCTTSSTTSCBHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEEecCCccccCCCCCeEEEEEEecChhhhhcCCccEEEEEE-eeeccCCCccccccchhhhHHHHHHHHHHHHc
Confidence 599999999888899998778899999999988765 56888877 47898888889999656999999999999999
Q ss_pred CCCeEEEEcCC--CcEEEeCceEEEEEE-CCE-EEccCCCCCCcccchHHHHHHHHHH-cCCcEEEEecCHHHHhhhhhh
Q 028343 78 GFTDVLFLNAE--KYIEEVSTSNIFLVK-GNE-ISTPPTSGTILPGITRKSIIEITHV-LGYQVKERAIPVEELFDAEEV 152 (210)
Q Consensus 78 g~deal~ld~~--g~v~E~~~sNlf~~~-~~~-l~TP~l~~~~L~GitR~~vl~~a~~-~gi~v~e~~i~~~el~~ade~ 152 (210)
|+||+||+|.+ |+|+|++++|+|+++ ||+ |+||+ +.++|+||||+.||++|++ +|++|+|++++++||.+|||+
T Consensus 221 G~~e~l~ld~~~~g~V~E~~~sNif~v~~dg~~l~TP~-~~~iL~GItR~~vl~la~~~~g~~v~e~~i~~~eL~~adEv 299 (358)
T 3uzo_A 221 DFADVIYLDPATHTTIEEAGAANFFAITQDGQKFVTPQ-SPSILPSITKYSLLWLAEHRLGLEVEEGDIRIDELGKFSEA 299 (358)
T ss_dssp TCSEECCBCTTTSCBBCBCSSSEEEEEETTSCEEEEEC-CTTSCCCHHHHHHHHHHHHTTCCEEEEECCBTTCGGGEEEE
T ss_pred CCCEEEEEeCCCCCeEEEcCCeeEEEEECCCeEEEECC-cCCcccCHHHHHHHHHHHhhcCCeEEEEECCHHHHHhhcce
Confidence 99999999985 999999999999995 788 99999 8999999999999999999 999999999999999999999
Q ss_pred hhcccccceEEEEEEEecCeEEeec--CCccHHHHHHHHHHHHhHccCCCCCCCCeEeC
Q 028343 153 FCTGTAVGVNSVNSITYQDERIEYK--RGAGTVGQKLYEMVTGIQTGRIEDKMGWTVEL 209 (210)
Q Consensus 153 f~tns~~gi~pV~~I~~~~~~i~~~--~~~g~~t~~L~~~~~~~~~g~~~~~~~w~~~~ 209 (210)
|+|||+.+|+||.+|+..++.+.+. +++||++++|+++|.++++|+.+|++||+++|
T Consensus 300 f~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt~~L~~~~~~iq~g~~~~~~~W~~~v 358 (358)
T 3uzo_A 300 GACGTAAVITPIGGIQHGDDFHVFYSESEPGPVTRRLYDELVGIQYGDKEAPEGWIVKV 358 (358)
T ss_dssp EEECTTTSSEEEEEEEETTEEEESSCSSSCCHHHHHHHHHHHHHHTTSSCCCTTCCEEC
T ss_pred eEEcCcceEEEEEEECcccceeEeCCCCCcCHHHHHHHHHHHHHHcCCCCCCCCCceEC
Confidence 9999999999999998655443343 24899999999999999999999999999986
No 7
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A*
Probab=100.00 E-value=2.9e-48 Score=335.20 Aligned_cols=204 Identities=34% Similarity=0.430 Sum_probs=182.7
Q ss_pred CeEEEEEEecCCCcCcCCC--CCcEEEEEEEecCCCc-----CCceEEEEEeeeeecCCC-CCCCCccccChHHHHHHHH
Q 028343 1 MYIRPLLMGSGPVLGVAPA--SEYTFITYASPVGNYH-----KGLLNLIVEEKFRRAIPG-GTGGVKAVTNYAIIYKPIA 72 (210)
Q Consensus 1 ~yiR~~~~g~~~~~g~~~~--~~~~~~i~~~p~~~~~-----~~g~~~~~~~~~~r~~~~-~l~~~K~~~~y~~~~~a~~ 72 (210)
.|||++++++.+.+|+.|+ .+++++|++.|+++++ .+|+++.+++ ++|..++ .++++|+++||+.++++++
T Consensus 94 ~~iR~~v~~g~~~~~~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~~~Kt~~ny~~~~la~~ 172 (308)
T 2eiy_A 94 CYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEWGAYLGEEAVRKGARLITSS-WARFPANVMPGKAKVGGNYVNSALAKM 172 (308)
T ss_dssp EEEEEEEECCSSCCSSCCGGGCSCEEEEEEEEC--------CCSCEEEEECS-SCBCCTTTSCTTSCBGGGHHHHHHHHH
T ss_pred EEEEEEEEecCCccCcCCCCCCCeEEEEEEEEcCccCCcccccCCeEEEEec-ceecCCCCcCcceehhhhHHHHHHHHH
Confidence 4899999988778888765 5789999999987643 3689998874 5676665 4589999866999999999
Q ss_pred HHHHCCCCeEEEEcCCCcEEEeCceEEEEEECCEEEccCCCCCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhhhhhh
Q 028343 73 EAKAKGFTDVLFLNAEKYIEEVSTSNIFLVKGNEISTPPTSGTILPGITRKSIIEITHVLGYQVKERAIPVEELFDAEEV 152 (210)
Q Consensus 73 ea~~~g~deal~ld~~g~v~E~~~sNlf~~~~~~l~TP~l~~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ade~ 152 (210)
+|+++|+||+||+|++|+|+|++++|||+++||+|+||+++. +|+||||+.||++|+++|++|+|++++++||.+|||+
T Consensus 173 ~A~~~G~de~l~ld~~G~V~Egs~sNif~v~~g~l~TP~~~~-iL~GitR~~ll~~a~~~g~~v~E~~i~~~dL~~adev 251 (308)
T 2eiy_A 173 EAVAAGADEALLLDEEGYVAEGSGENLFFVRDGVIYALEHSV-NLEGITRDSVIRIAKDLGYEVQVVRATRDQLYMADEV 251 (308)
T ss_dssp HHHHTTCSEEEEEBTTSSEEEESSCEEEEEETTEEEEECCTT-SCCCHHHHHHHHHHHHTTCCEEEECCCHHHHHTCSEE
T ss_pred HHHHcCCCEEEEECCCCeEEEcCceEEEEEECCEEEeCCcCC-CCchHHHHHHHHHHHHCCCeEEEEeCCHHHHhhCCEE
Confidence 999999999999999999999999999999999999999988 9999999999999999999999999999999999999
Q ss_pred hhcccccceEEEEEEEecCeEEeecCCccHHHHHHHHHHHHhHccCCCCCCCCeEeC
Q 028343 153 FCTGTAVGVNSVNSITYQDERIEYKRGAGTVGQKLYEMVTGIQTGRIEDKMGWTVEL 209 (210)
Q Consensus 153 f~tns~~gi~pV~~I~~~~~~i~~~~~~g~~t~~L~~~~~~~~~g~~~~~~~w~~~~ 209 (210)
|+|||++||+||.+|+ ++.++ .+++||++++|+++|.++++|+.+++++|+++|
T Consensus 252 fltns~~gv~pV~~id--~~~~~-~g~~g~~~~~l~~~~~~~~~~~~~~~~~w~~~v 305 (308)
T 2eiy_A 252 FMTGTAAEVTPVSMID--WRPIG-KGTAGPVALRLREVYLEAVTGRRPEYEGWLTYV 305 (308)
T ss_dssp EEEETTTEEEEEEEET--TEECT-TSSCCHHHHHHHHHHHHHHTTCCGGGGGGEEEC
T ss_pred EEccCcceEEEEEEEc--CEECC-CCCCCHHHHHHHHHHHHHHcCCCCCccCCCeeC
Confidence 9999999999999995 77753 456899999999999999999999999999997
No 8
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A*
Probab=100.00 E-value=3.3e-48 Score=342.17 Aligned_cols=207 Identities=32% Similarity=0.554 Sum_probs=188.1
Q ss_pred CeEEEEEEecCCCcCcCCCCCcEEEEEEEecCCCcC----CceEEEEEeeeeecCCCCCCCCccccChHHHHHHHHHHHH
Q 028343 1 MYIRPLLMGSGPVLGVAPASEYTFITYASPVGNYHK----GLLNLIVEEKFRRAIPGGTGGVKAVTNYAIIYKPIAEAKA 76 (210)
Q Consensus 1 ~yiR~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~~~----~g~~~~~~~~~~r~~~~~l~~~K~~~~y~~~~~a~~ea~~ 76 (210)
+||||+++++++.+|+.|+.+++++|+++|+++++. +|+++.+++.+.|..++.++++|+.+||+.+++++++|++
T Consensus 140 ~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~g~~~~v~l~~~~~~~R~~~~~~~~~Kt~~ny~~~~la~~eA~~ 219 (365)
T 2a1h_A 140 LYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALK 219 (365)
T ss_dssp EEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSSSCCCEEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHH
T ss_pred EEEEEEEEecCCccCCCCCCCcEEEEEEEECccccccccccceEEEEccccccCCCCccchhchhhccHHHHHHHHHHHH
Confidence 499999998888899988778999999999988764 4699988765678788888999985699999999999999
Q ss_pred CCCCeEEEE-cCCCcEEEeCceEEEEEE---CCE--EEccCCCCCCcccchHHHHHHHHHHc-CCcEEEEecCHHHHhhh
Q 028343 77 KGFTDVLFL-NAEKYIEEVSTSNIFLVK---GNE--ISTPPTSGTILPGITRKSIIEITHVL-GYQVKERAIPVEELFDA 149 (210)
Q Consensus 77 ~g~deal~l-d~~g~v~E~~~sNlf~~~---~~~--l~TP~l~~~~L~GitR~~vl~~a~~~-gi~v~e~~i~~~el~~a 149 (210)
+|+||+||+ |.+|+|+|++++|||+++ ||+ |+||+++.++|+||||+.||++|+++ |++|+|+.++++||.+|
T Consensus 220 ~G~de~L~l~d~~G~V~E~~~sNif~v~~~~dg~~~l~TP~l~~~iL~GITR~~vl~la~~~~G~~v~Er~i~~~eL~~A 299 (365)
T 2a1h_A 220 RGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRA 299 (365)
T ss_dssp TTCSEEEEEETTTTEEEEETTEEEEEEEECTTSCEEEEECCCSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHH
T ss_pred cCCCeEEEEECCCCeEEEcCceEEEEEEecCCCcEEEEeCCCCCCccccHHHHHHHHHHHhcCCCceEEEeCCHHHHHHH
Confidence 999999999 889999999999999996 676 99999999999999999999999995 99999999999999999
Q ss_pred ------hhhhhcccccceEEEEEEEecCeEEee--cCCccHHHHHHHHHHHHhHccCCCCCCCCeEeC
Q 028343 150 ------EEVFCTGTAVGVNSVNSITYQDERIEY--KRGAGTVGQKLYEMVTGIQTGRIEDKMGWTVEL 209 (210)
Q Consensus 150 ------de~f~tns~~gi~pV~~I~~~~~~i~~--~~~~g~~t~~L~~~~~~~~~g~~~~~~~w~~~~ 209 (210)
||+|+|||+++|+||.+|+++++.+.+ ++++||++++|+++|.++++|+.+ ++|+++|
T Consensus 300 ~~~g~~dEvf~tnt~~~i~PV~~i~~~~~~~~~~~~g~~g~vt~~L~~~~~~~~~g~~~--~~W~~~v 365 (365)
T 2a1h_A 300 LEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGPELILRFQKELKEIQYGIRA--HEWMFPV 365 (365)
T ss_dssp HHTTCEEEEEEEETTTEEEEEEEEEETTEEEECTTGGGTTHHHHHHHHHHHHHHTTSSC--CTTEEEC
T ss_pred HhcCCccEEEEcCCeeEEEEEEEEEeCCeEEeeCCCCCcCHHHHHHHHHHHHHHcCCCC--CCCeeeC
Confidence 999999999999999999876887654 345799999999999999999987 8999986
No 9
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A*
Probab=100.00 E-value=1.7e-47 Score=339.54 Aligned_cols=208 Identities=37% Similarity=0.608 Sum_probs=187.7
Q ss_pred CeEEEEEEecCCCcCcCCCCCcEEEEEEEecCCCcC----CceEEEEEeeeeecCCCCCCCCccccChHHHHHHHHHHHH
Q 028343 1 MYIRPLLMGSGPVLGVAPASEYTFITYASPVGNYHK----GLLNLIVEEKFRRAIPGGTGGVKAVTNYAIIYKPIAEAKA 76 (210)
Q Consensus 1 ~yiR~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~~~----~g~~~~~~~~~~r~~~~~l~~~K~~~~y~~~~~a~~ea~~ 76 (210)
+||||+++|+++.+|+.|+.+++++|+++|.++++. +|+++.+++...|..|..++.+|+.+||+.+++++++|++
T Consensus 160 ~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~~y~~~~~~~~v~l~~~~~~~r~~p~~~g~~K~~~Ny~~~~la~~eA~~ 239 (386)
T 2coi_A 160 LYIRPTFIGTEPSLGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVD 239 (386)
T ss_dssp EEEEEEEEECCCSCSCSCCSEEEEEEEEEEECCCC-----CCEEEEECTTCCSCCTTSSTTSCCTHHHHTTHHHHHHHHT
T ss_pred EEEEEEEEecCCccccCCCCCcEEEEEEEECcccccccccccEEEEEcccccccCCCcccccccccChHHHHHHHHHHHH
Confidence 499999998877889998888999999999988764 5799988765567777778899985699999999999999
Q ss_pred CCCCeEEEEc-CCCcEEEeCceEEEEEE---CC--EEEccCCCCCCcccchHHHHHHHHHH-cCCcEEEEecCHHHHhhh
Q 028343 77 KGFTDVLFLN-AEKYIEEVSTSNIFLVK---GN--EISTPPTSGTILPGITRKSIIEITHV-LGYQVKERAIPVEELFDA 149 (210)
Q Consensus 77 ~g~deal~ld-~~g~v~E~~~sNlf~~~---~~--~l~TP~l~~~~L~GitR~~vl~~a~~-~gi~v~e~~i~~~el~~a 149 (210)
+|+||+||+| .+|+|+|++++|||+++ || +|+||+++.++|+||||+.||++|++ .|++|+|++++++||.+|
T Consensus 240 ~G~de~L~ld~~~g~V~E~~~sNiF~v~~~~~g~~~l~TP~l~~~iL~GITR~~vl~la~~~~G~~V~Er~i~~~eL~~A 319 (386)
T 2coi_A 240 NGCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQWGEFKVSERYLTMDDLTTA 319 (386)
T ss_dssp TTCSEEEEEETTTTEEEEETTEEEEEEEECTTSCEEEEECCCSSSSCCCHHHHHHHHHHHHHCSSEEEECCCBHHHHHHH
T ss_pred cCCCEEEEEECCCCEEEEeCCceEEEEEEcCCCCEEEEECCCCCCccHHHHHHHHHHHHHhccCCcEEEEECCHHHHHHH
Confidence 9999999999 79999999999999997 88 99999999999999999999999999 899999999999999999
Q ss_pred ------hhhhhcccccceEEEEEEEecCeEEeec--CCccHHHHHHHHHHHHhHccCCCCCCCCeEeCC
Q 028343 150 ------EEVFCTGTAVGVNSVNSITYQDERIEYK--RGAGTVGQKLYEMVTGIQTGRIEDKMGWTVELD 210 (210)
Q Consensus 150 ------de~f~tns~~gi~pV~~I~~~~~~i~~~--~~~g~~t~~L~~~~~~~~~g~~~~~~~w~~~~~ 210 (210)
||+|+|||+.+|+||.+|++.++.+.+. +++||++++|++.|.++++|+.+ ++|+++|+
T Consensus 320 ~~~g~~dEvF~tgTa~~i~PV~~I~~~~~~~~~~~~g~~g~vt~~L~~~l~~iq~g~~~--~~W~~~v~ 386 (386)
T 2coi_A 320 LEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPKLASRILSKLTDIQYGREE--RDWTIVLS 386 (386)
T ss_dssp HTTTCEEEEEEEETTTEEEEEEEEEESSSEEECGGGGGTTHHHHHHHHHHHHHHTTSSC--CTTEEEC-
T ss_pred HhcCCccEEEEecceeEEEEEEEEeeCCeEEecCCCCCcCHHHHHHHHHHHHHhCCCCC--CCCeEeCC
Confidence 9999999999999999998767777542 34799999999999999999987 69999985
No 10
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A*
Probab=100.00 E-value=3.1e-44 Score=304.59 Aligned_cols=185 Identities=19% Similarity=0.192 Sum_probs=167.6
Q ss_pred CeEEEEEEecCCCcCcCCC--CCcEEEEEEEecCCCc----CCceEEEEEeeeeecCCCCCCCCccccChHHHHHHHHHH
Q 028343 1 MYIRPLLMGSGPVLGVAPA--SEYTFITYASPVGNYH----KGLLNLIVEEKFRRAIPGGTGGVKAVTNYAIIYKPIAEA 74 (210)
Q Consensus 1 ~yiR~~~~g~~~~~g~~~~--~~~~~~i~~~p~~~~~----~~g~~~~~~~~~~r~~~~~l~~~K~~~~y~~~~~a~~ea 74 (210)
.|||++++++.+++|+.|+ .+|++++.+.|+++++ .+|+++.++ +.+|..++.++++|++ ||+.+++++++|
T Consensus 77 ~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~g~~l~~~-~~~~~~~~~~~~~Kt~-n~~~~~~a~~~A 154 (269)
T 1i2k_A 77 GVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALS-PVRLGRNPHLAGIKHL-NRLEQVLIRSHL 154 (269)
T ss_dssp EEEEEEEECCSCCSTTCCTTCCCCEEEEEEECCCSHHHHHHHHCEEEEEC-SCCBCCCTTTTBCCBS-CCHHHHHHHHHH
T ss_pred eEEEEEEEcCCCCCCCCCccCCCcEEEEEEEECCCcchhhhcCCeEEEEe-ceecCCCCcccCcchh-hhHHHHHHHHHH
Confidence 3899999988778888876 4789999999998743 378999887 4567666678999995 899999999999
Q ss_pred HHCCCCeEEEEcCCCcEEEeCceEEEEEECCEEEccCCCCCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhhhhhhhh
Q 028343 75 KAKGFTDVLFLNAEKYIEEVSTSNIFLVKGNEISTPPTSGTILPGITRKSIIEITHVLGYQVKERAIPVEELFDAEEVFC 154 (210)
Q Consensus 75 ~~~g~deal~ld~~g~v~E~~~sNlf~~~~~~l~TP~l~~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ade~f~ 154 (210)
+++|+||+||+|.+|+|+|++++|||+++||+|+||+++.++|+||||+.++++|+++|++|+|++++++||.+|||+|+
T Consensus 155 ~~~G~de~l~ld~~G~v~E~s~sNif~v~~g~l~TP~~~~~iL~GitR~~ll~~a~~~g~~v~e~~i~~~eL~~adevfl 234 (269)
T 1i2k_A 155 EQTNADEALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEESLQADEMVI 234 (269)
T ss_dssp TTSSCSEEEEEBTTSBEEECSSSEEEEEETTEEEEECCSSSSBCCHHHHHHHHHHHHSSSEEEEECCBHHHHHTCSEEEE
T ss_pred HHCCCCEEEEECCCCcEEEcCceEEEEEECCEEECCCCccCccCCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccceEEEEEEEecCeEEeecCCccHHHHHHHHHHHH
Q 028343 155 TGTAVGVNSVNSITYQDERIEYKRGAGTVGQKLYEMVTG 193 (210)
Q Consensus 155 tns~~gi~pV~~I~~~~~~i~~~~~~g~~t~~L~~~~~~ 193 (210)
|||++||+||.+|+ ++.+ . .||++++|+++|..
T Consensus 235 tns~~gv~pV~~id--~~~~--~--~g~~~~~l~~~~~~ 267 (269)
T 1i2k_A 235 CNALMPVMPVCACG--DVSF--S--SATLYEYLAPLCER 267 (269)
T ss_dssp ECSSSCEEEEEEET--TEEC--C--CCHHHHHHHHHHHT
T ss_pred cCChhheEEEEEEC--CEEe--c--CcHHHHHHHHHHhc
Confidence 99999999999995 7774 2 48999999999864
No 11
>2xpf_A 4-amino-4-deoxychorismate lyase; para-aminobenzoic acid, folate biosynthesis; HET: PLP PG4; 1.75A {Pseudomonas aeruginosa} PDB: 2y4r_A* 2xpf_B*
Probab=100.00 E-value=5.2e-44 Score=306.81 Aligned_cols=185 Identities=22% Similarity=0.263 Sum_probs=167.6
Q ss_pred eEEEEEEecCCCcCcCCC--CCcEEEEEEEecCCCc----CCceEEEEEeeeeecCCCCCCCCccccChHHHHHHHHHHH
Q 028343 2 YIRPLLMGSGPVLGVAPA--SEYTFITYASPVGNYH----KGLLNLIVEEKFRRAIPGGTGGVKAVTNYAIIYKPIAEAK 75 (210)
Q Consensus 2 yiR~~~~g~~~~~g~~~~--~~~~~~i~~~p~~~~~----~~g~~~~~~~~~~r~~~~~l~~~K~~~~y~~~~~a~~ea~ 75 (210)
|||++++++.+.+|+.|+ .+|++++.+.|+++++ .+|+++.+++ .+|..++.++++|++ ||+.+++++++|+
T Consensus 99 ~iR~~v~rg~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~gv~l~~~~-~~~~~~~~~~~~Kt~-ny~~~~la~~~A~ 176 (292)
T 2xpf_A 99 VAKLIVTRGEGLRGYAPPAEASPRRILSGSPRPAYPERHWQQGVRLFACR-TRLAEQPLLAGLKHL-NRLEQVLARAEWS 176 (292)
T ss_dssp EEEEEEECCBCCSSSSCCTTCCCEEEEEEECCCCCCHHHHHTCEEEEECC-CCBCCCTTTTBCCBS-CCHHHHHHHTTCC
T ss_pred EEEEEEEecCCCCCCCCCCCCCcEEEEEEEECCccchhhccCCeEEEEee-eeccCCCCCCCcchh-hhHHHHHHHHHHH
Confidence 899999977677888876 3689999999998765 3799998874 456555578899985 8999999999999
Q ss_pred HCCCCeEEEEcCCCcEEEeCceEEEEEECCEEEccCCCCCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhhhhhhhhc
Q 028343 76 AKGFTDVLFLNAEKYIEEVSTSNIFLVKGNEISTPPTSGTILPGITRKSIIEITHVLGYQVKERAIPVEELFDAEEVFCT 155 (210)
Q Consensus 76 ~~g~deal~ld~~g~v~E~~~sNlf~~~~~~l~TP~l~~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ade~f~t 155 (210)
++|+||+||+|.+|+|+|++++|||+++||+|+|||++.++|+||||+.|+++|+++|++|+|++++++||.+|||+|+|
T Consensus 177 ~~G~de~L~ld~~G~V~Egs~sNif~v~~g~l~TPpl~~~iL~GitR~~vl~~a~~~G~~v~E~~i~~~eL~~adevflt 256 (292)
T 2xpf_A 177 DAGHAEGLMLDVHERVVEGVFSNLLLVLDGTLVAPDLRRCGVAGVMRAELLERAEGIGVPLAIRDVSMAELATADEVFLC 256 (292)
T ss_dssp CTTCSEEEEEBTTCCEEEESSSEEEEEETTEEEEECCSSSSBCCHHHHHHHHHHHHTTCCEEEECBCHHHHHTCSEEEEE
T ss_pred HcCCCEEEEECCCCCEEEcCCeEEEEEECCEEEeCCCCCccCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHhCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEEEEEecCeEEeecCCccHHHHHHHHHHHHh
Q 028343 156 GTAVGVNSVNSITYQDERIEYKRGAGTVGQKLYEMVTGI 194 (210)
Q Consensus 156 ns~~gi~pV~~I~~~~~~i~~~~~~g~~t~~L~~~~~~~ 194 (210)
||++||+||.+|+ ++.+ + +||++++|+++|.+.
T Consensus 257 ns~~gv~PV~~id--~~~~--~--~g~~t~~l~~~~~~~ 289 (292)
T 2xpf_A 257 NSQFGIWPVRALD--EHVW--P--VGELTRKLQDQLRDD 289 (292)
T ss_dssp ETTTEEEEEEEET--TEEC--C--CCHHHHHHHHHHHHH
T ss_pred cCcccEEEEEEEC--CEEe--C--CCHHHHHHHHHHHHH
Confidence 9999999999995 7764 2 689999999999864
No 12
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A*
Probab=100.00 E-value=5.6e-43 Score=298.39 Aligned_cols=185 Identities=22% Similarity=0.212 Sum_probs=163.6
Q ss_pred eEEEEEEecCCCcCcCCC---CCcEEEEEEEecCCCc---CCceEEEEEeeeeecCCCCCCCCccccChHHHHHHHHHHH
Q 028343 2 YIRPLLMGSGPVLGVAPA---SEYTFITYASPVGNYH---KGLLNLIVEEKFRRAIPGGTGGVKAVTNYAIIYKPIAEAK 75 (210)
Q Consensus 2 yiR~~~~g~~~~~g~~~~---~~~~~~i~~~p~~~~~---~~g~~~~~~~~~~r~~~~~l~~~K~~~~y~~~~~a~~ea~ 75 (210)
|||+.++++.+++|+..+ .+|++++++.|++.+. .+|+++.++++. | ..++++||+ ||+.+++++++|+
T Consensus 86 ~lri~vtrG~~~r~~~~p~~~~~~~~~i~~~p~~~~~~~~~~gv~~~~~~~~-r---~~~~~~Kt~-nyl~~~la~~eA~ 160 (277)
T 3daa_A 86 HIYFQVTRGTSPRAHQFPENTVKPVIIGYTKENPRPLENLEKGVKATFVEDI-R---WLRCDIKSL-NLLGAVLAKQEAH 160 (277)
T ss_dssp EEEEEEESCBCSCCSSCCSSCCCCEEEEEEEECCCCHHHHHHCEEEEEEECC-C---CSCTTSCBS-CCHHHHHHHHHHH
T ss_pred EEEEEEEecCCCcCCCCCCCCCCcEEEEEEEECCCChHHHhCCeEEEEecCc-c---ccCCCcchh-hhHHHHHHHHHHH
Confidence 789999977666777643 4789999999998532 279999887542 2 246799985 9999999999999
Q ss_pred HCCCCeEEEEcCCCcEEEeCceEEEEEECCEEEccCCCCCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhhhhhhhhc
Q 028343 76 AKGFTDVLFLNAEKYIEEVSTSNIFLVKGNEISTPPTSGTILPGITRKSIIEITHVLGYQVKERAIPVEELFDAEEVFCT 155 (210)
Q Consensus 76 ~~g~deal~ld~~g~v~E~~~sNlf~~~~~~l~TP~l~~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ade~f~t 155 (210)
++|+||+||+| +|+|+|++++|+|+++||+|+|||++.++|+||||+.++++|+++|++|+|++++++||.+|||+|+|
T Consensus 161 ~~g~~e~l~l~-~g~v~E~~~sNif~~~~~~l~TP~~~~~iL~GitR~~vl~~~~~~g~~v~e~~i~~~el~~adevf~~ 239 (277)
T 3daa_A 161 EKGCYEAILHR-NNTVTEGSSSNVFGIKDGILYTHPANNMILKGITRDVVIACANEINMPVKEIPFTTHEALKMDELFVT 239 (277)
T ss_dssp HTTCSEEEEEE-TTEEEEETTBEEEEEETTEEEECCSSTTSCCCHHHHHHHHHHHHTTCCEECCCCBHHHHHTCSEEEEE
T ss_pred HCCCCEEEEEc-CCEEEEcCceEEEEEECCEEECCCCcCCCCccHHHHHHHHHHHHcCCeEEEEeCCHHHHHhcCeeeee
Confidence 99999999997 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEEEEEecCeEEeecCCccHHHHHHHHHHHHhH
Q 028343 156 GTAVGVNSVNSITYQDERIEYKRGAGTVGQKLYEMVTGIQ 195 (210)
Q Consensus 156 ns~~gi~pV~~I~~~~~~i~~~~~~g~~t~~L~~~~~~~~ 195 (210)
||++||+||.+|+ ++.++ ++++||+|++|+++|.+.+
T Consensus 240 ns~~~i~pV~~id--~~~~~-~g~~g~~t~~L~~~~~~~i 276 (277)
T 3daa_A 240 STTSEITPVIEID--GKLIR-DGKVGEWTRKLQKQFETKI 276 (277)
T ss_dssp ETTTEEEEEEEET--TEEST-TSSCCHHHHHHHHHHHTTC
T ss_pred cChhhEEEEEEEC--CEECC-CCCcCHHHHHHHHHHHHhc
Confidence 9999999999995 77753 4568999999999998753
No 13
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila}
Probab=100.00 E-value=1.9e-42 Score=294.39 Aligned_cols=183 Identities=25% Similarity=0.321 Sum_probs=161.8
Q ss_pred eEEEEEEecCCCcCcCCCC--CcEEEEEEEecCCCcCCceEEEEEeeeeecCCCCCCCCccccChHHHHHHHHHHHHCCC
Q 028343 2 YIRPLLMGSGPVLGVAPAS--EYTFITYASPVGNYHKGLLNLIVEEKFRRAIPGGTGGVKAVTNYAIIYKPIAEAKAKGF 79 (210)
Q Consensus 2 yiR~~~~g~~~~~g~~~~~--~~~~~i~~~p~~~~~~~g~~~~~~~~~~r~~~~~l~~~K~~~~y~~~~~a~~ea~~~g~ 79 (210)
|||++++++.+.+|+.++. .|+++++ .|+++. ..++++.++ +++|..++.++++||+ ||+++++++++|+++|+
T Consensus 85 ~irl~v~rg~~~~g~~~~~~~~~~~~~~-~p~~~~-~~~v~l~~~-~~~r~~~~~~~~~Kt~-nyl~~~la~~~A~~~G~ 160 (272)
T 3lul_A 85 GIKAILSGGPASRGLAERGQVSQLIFQT-FNYSIQ-KHPVRLISI-NWLRDKANPLYQLKSV-NYLEAIIAQRQAIAVGA 160 (272)
T ss_dssp EEEEEEECCBCCSSTTCCCSSEEEEEEE-ECCCCC-CSCEEEEEE-EEEECTTCGGGGSCBS-CCHHHHHHHHHHHHTTC
T ss_pred EEEEEEEecCCccCcCCCCCCCcEEEEE-ECCCCc-cccEEEEEE-eEEecCCCcccchhhh-ccHHHHHHHHHHHHcCC
Confidence 8999999887788998764 4677666 665432 245888776 6788877788999995 99999999999999999
Q ss_pred CeEEEEcCCCcEEEeCceEEEEEECCEEEccCCCCCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhhhhhhhhccccc
Q 028343 80 TDVLFLNAEKYIEEVSTSNIFLVKGNEISTPPTSGTILPGITRKSIIEITHVLGYQVKERAIPVEELFDAEEVFCTGTAV 159 (210)
Q Consensus 80 deal~ld~~g~v~E~~~sNlf~~~~~~l~TP~l~~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ade~f~tns~~ 159 (210)
||+||+|.+|+|+|++++|+|+++||+|+|||++.++|+||||+.++++|+++|++|+|++++++||.+|||+|+|||++
T Consensus 161 de~L~ld~~g~v~E~~~sNif~~~~g~l~TP~l~~~iL~GitR~~ll~la~~~g~~v~e~~i~~~el~~adevf~~ns~~ 240 (272)
T 3lul_A 161 DDALFFNTENHVTETTCANLFLIENNILYTPRVEDGILPGITRARLISHCQQHKMSVQEISLTKKRIEDADAVFLTNSLQ 240 (272)
T ss_dssp SEEEEEETTSBEEEESSCEEEEEETTEEEECCGGGTCCCCHHHHHHHHHHHHTTCCEEECCCBHHHHHTCSEEEEEETTT
T ss_pred CEEEEECCCCeEEEcCCeEEEEEECCEEECCCCccCcCcCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCEEEEEcCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEecCeEEeecCCccHHHHHHHHHHHHhHcc
Q 028343 160 GVNSVNSITYQDERIEYKRGAGTVGQKLYEMVTGIQTG 197 (210)
Q Consensus 160 gi~pV~~I~~~~~~i~~~~~~g~~t~~L~~~~~~~~~g 197 (210)
||+||++|+ ++.+ + . |++|+++|.+..+.
T Consensus 241 ~v~PV~~id--~~~~--~--~---t~~l~~~y~~~~~~ 269 (272)
T 3lul_A 241 GIRRVLSLD--NIIF--E--V---NHPIIDKLIFLLNQ 269 (272)
T ss_dssp EEEEEEEET--TEEC--C--C---CCHHHHHHHHHHHH
T ss_pred hEEEEEEEC--CEEc--c--h---HHHHHHHHHHHHhh
Confidence 999999994 7774 2 2 88999999876543
No 14
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8}
Probab=100.00 E-value=9.3e-42 Score=291.86 Aligned_cols=187 Identities=27% Similarity=0.312 Sum_probs=162.7
Q ss_pred CeEEEEEEecCCCcCcCCCCCcEEEEEEEecCCCc-CCceEEEEEeeeeecCCC-CCCCCccccChHHHHHHHHHHHHCC
Q 028343 1 MYIRPLLMGSGPVLGVAPASEYTFITYASPVGNYH-KGLLNLIVEEKFRRAIPG-GTGGVKAVTNYAIIYKPIAEAKAKG 78 (210)
Q Consensus 1 ~yiR~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~~-~~g~~~~~~~~~~r~~~~-~l~~~K~~~~y~~~~~a~~ea~~~g 78 (210)
.|||+++.. .| .++++.+.|+++++ .+|+++.++ +.++.... .++++|++ ||+++++++++|++
T Consensus 96 ~~iR~~v~~----~~------~~~~i~~~p~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~Kt~-~~l~~~la~~~A~~-- 161 (285)
T 3csw_A 96 VRIKVYLFP----DS------GEVLFVFSPLNIPDLETGVEVKIS-NVRRIPDLSTPPALKIT-GRTDIVLARREIVD-- 161 (285)
T ss_dssp EEEEEEECT----TT------CCEEEEEEECCCCCCTTCEEEEEC-SSCCCCTTTSCTTCCBT-TCHHHHHHHTTCSS--
T ss_pred eEEEEEEEc----CC------CEEEEEEEeCCCccccCCeEEEEE-eEEecCCCCCCCccchh-ccHHHHHHHHHHHh--
Confidence 389998821 11 16788899998765 579999887 45553332 35799997 69999999998877
Q ss_pred CCeEEEEcCCCcEEEeCceEEEEEECCEEEccCCCCCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhhhhhhhhcccc
Q 028343 79 FTDVLFLNAEKYIEEVSTSNIFLVKGNEISTPPTSGTILPGITRKSIIEITHVLGYQVKERAIPVEELFDAEEVFCTGTA 158 (210)
Q Consensus 79 ~deal~ld~~g~v~E~~~sNlf~~~~~~l~TP~l~~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ade~f~tns~ 158 (210)
+||+||+|++|+|+|++++|||+++||+|+||+++.++|+||||+.++++|+++|++|+|++++++||.+|||+|+|||+
T Consensus 162 ~de~L~ld~~G~V~Egs~sNif~v~~g~l~TP~l~~~iL~GitR~~ll~~a~~~g~~v~E~~i~~~dL~~adevfltns~ 241 (285)
T 3csw_A 162 CYDVILLGLNGQVCEGSFSNVFLVKEGKLITPSLDSGILDGITRENVIKLAKSLEIPVEERVVWVWELFEADEMFLTHTS 241 (285)
T ss_dssp SSEEEEECTTSBEEEESSSEEEEEETTEEEEECGGGTCCCCHHHHHHHHHHHHTTCCEEEECCBHHHHHTCSEEEEEETT
T ss_pred CCeEEEECCCCcEEEcCceEEEEEECCEEEeCCCCCCccCCHHHHHHHHHHHHCCCeEEEEeCCHHHHhhCCEEEEecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEEecCeEEeecCCccHHHHHHHHHHHHhHccCCCCCCCCeE
Q 028343 159 VGVNSVNSITYQDERIEYKRGAGTVGQKLYEMVTGIQTGRIEDKMGWTV 207 (210)
Q Consensus 159 ~gi~pV~~I~~~~~~i~~~~~~g~~t~~L~~~~~~~~~g~~~~~~~w~~ 207 (210)
+||+||.+|+ ++.++ ++++||++++|+++|.++++|+. ++|+.
T Consensus 242 ~gv~PV~~id--~~~~~-~g~~g~~t~~L~~~~~~~~~~~~---~~w~~ 284 (285)
T 3csw_A 242 AGVVPVRRLN--EHSFF-EEEPGPVTATLMENFEPFVLNLE---ENWVG 284 (285)
T ss_dssp TEEEEEEEET--TEESC-SSSCCHHHHHHHHHHHHHHHTCG---GGTTT
T ss_pred ceEEEEEEEC--CEECC-CCCCCHHHHHHHHHHHHHHhCcC---CCCCC
Confidence 9999999995 77753 45689999999999999999986 68874
No 15
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.6e-41 Score=291.91 Aligned_cols=180 Identities=23% Similarity=0.367 Sum_probs=128.9
Q ss_pred CeEEEEEEecCCCcCcCCCCCcEEEEEEEecCCCc----CCceEEEEEeeeee-----------------------cCCC
Q 028343 1 MYIRPLLMGSGPVLGVAPASEYTFITYASPVGNYH----KGLLNLIVEEKFRR-----------------------AIPG 53 (210)
Q Consensus 1 ~yiR~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~~----~~g~~~~~~~~~~r-----------------------~~~~ 53 (210)
.|||++++++.+.+| .|++++++.|+++++ .+|+++.+++. +. ..|.
T Consensus 107 ~~iRl~vtrG~~~~g-----~p~~~v~~~p~~~~~~~~~~~gv~~~~~~~-~~~~~~~~~~~~~~~r~~~s~~~~~~~p~ 180 (315)
T 3sno_A 107 ASCTWTLSRGRSSTG-----LASGWLTITPVSSDKLAQREHGVSVMTSSR-GYSIDTGLPGIGKATRGELSKVERTPAPW 180 (315)
T ss_dssp EEEEEEEECCBTTTC-----CCEEEEEEEECCHHHHHHHHHCEEEEEEEC------------------------------
T ss_pred EEEEEEEEeCCCCCC-----CCEEEEEEEECCCcchhhhcCCEEEEEecc-ccccccccccccccccccccccccccCcc
Confidence 389999998766554 478899999987643 27999887742 11 2233
Q ss_pred CCCCCccccChHHHHHHHHHHHHCCCCeEEEEcCCCcEEEeCceEEEEEECCEEEccCCCCCCcccchHHHHHHHHHHcC
Q 028343 54 GTGGVKAVTNYAIIYKPIAEAKAKGFTDVLFLNAEKYIEEVSTSNIFLVKGNEISTPPTSGTILPGITRKSIIEITHVLG 133 (210)
Q Consensus 54 ~l~~~K~~~~y~~~~~a~~ea~~~g~deal~ld~~g~v~E~~~sNlf~~~~~~l~TP~l~~~~L~GitR~~vl~~a~~~g 133 (210)
.++++||+ ||+++++++++|+++|+||+||+|.+| |+|++++|+|+++||+|+|||++.++|+||||+.++++|+++|
T Consensus 181 ~l~~~Kt~-nyl~~vla~~~A~~~G~de~l~l~~~G-v~E~s~sN~f~~~~g~l~TPp~~~~iL~GitR~~ll~~a~~~g 258 (315)
T 3sno_A 181 LTVGAKTL-AYAANMAALRYAKSNGFDDVIFTDGDR-VLEGATSTVVSFKGDKIRTPSPGGDILPGTTQAALFAHATEKG 258 (315)
T ss_dssp -------------------------CEEEEEEETTE-EEEESSSEEEEEETTEEEEECCC------HHHHHHHHHHHHTT
T ss_pred cccCcchh-ccHHHHHHHHHHHHcCCCEEEEEeCCC-cEEcCCeeEEEEECCEEEcCCCCCCcChhHHHHHHHHHHHHcC
Confidence 46899997 999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred CcEEEEecCHHHHhhhhhhhhcccccceEEEEEEEecCeEEeecCCccHHHHHHHHHHHHh
Q 028343 134 YQVKERAIPVEELFDAEEVFCTGTAVGVNSVNSITYQDERIEYKRGAGTVGQKLYEMVTGI 194 (210)
Q Consensus 134 i~v~e~~i~~~el~~ade~f~tns~~gi~pV~~I~~~~~~i~~~~~~g~~t~~L~~~~~~~ 194 (210)
++|+|+.++++||.+|||+|+|||++||+||++|+ ++.+ ..++++++|+++|++.
T Consensus 259 ~~v~e~~i~~~eL~~adevfl~ns~~gv~pV~~id--~~~~----~~~~~~~~l~~~~~~~ 313 (315)
T 3sno_A 259 WRCKEKDLSIDDLFGADSVWLVSSVRGPVRVTRLD--GHKL----RKPDNEKEIKALITKA 313 (315)
T ss_dssp CEEEEECCBHHHHHHSSEEEEEETTTEEEEEEEES--SSCC----CCCTTHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHhCCeeEEEcCcccEEEEEEEC--CEEC----CCChHHHHHHHHHHHh
Confidence 99999999999999999999999999999999995 7764 3689999999999874
No 16
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti}
Probab=100.00 E-value=3.5e-36 Score=248.65 Aligned_cols=148 Identities=20% Similarity=0.214 Sum_probs=134.0
Q ss_pred CeEEEEEEecCCCcCcCCCCCcEEEEEEEecCCCcC-CceEEEEEeeeeecCCCCCCCCccccChHHHHHHHHHHHHCCC
Q 028343 1 MYIRPLLMGSGPVLGVAPASEYTFITYASPVGNYHK-GLLNLIVEEKFRRAIPGGTGGVKAVTNYAIIYKPIAEAKAKGF 79 (210)
Q Consensus 1 ~yiR~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~~~-~g~~~~~~~~~~r~~~~~l~~~K~~~~y~~~~~a~~ea~~~g~ 79 (210)
.|||+++++++ .+.+.+.|+++++. +|+++.+++ .++..++.++++|++ ||+.+.+++++|+++|+
T Consensus 71 ~~iR~~~~~~g-----------~~~i~~~p~~~~~~~~~~~l~~~~-~~~~~~~~~~~~Kt~-nr~~~~~a~~~a~~~g~ 137 (221)
T 3qqm_A 71 MRTRLALARNG-----------DATASAQPYEPLAADKVWILRLAR-TRLDSQNTLLRHKTS-RRQLYTHARSEYLVTQA 137 (221)
T ss_dssp EEEEEEEETTS-----------CEEEEEEECCCCCTTCCEEEEECS-CCBCTTCGGGGSCBS-CCHHHHHHHHTSCTTTC
T ss_pred EEEEEEEEcCC-----------CEEEEEEcCCCCCCCCCEEEEEee-eEecCCCcchhchhc-chHHHHHHHHHHHhcCC
Confidence 48999999753 36788899887654 799998874 667777788999995 99999999999999999
Q ss_pred CeEEEEcCCCcEEEeCceEEEEEEC-CEEEccCCCCCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhhhhhhhhcccc
Q 028343 80 TDVLFLNAEKYIEEVSTSNIFLVKG-NEISTPPTSGTILPGITRKSIIEITHVLGYQVKERAIPVEELFDAEEVFCTGTA 158 (210)
Q Consensus 80 deal~ld~~g~v~E~~~sNlf~~~~-~~l~TP~l~~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ade~f~tns~ 158 (210)
||+||+|++|+|+|++++|+|++++ |+|+|||++.++|+||||+.+++++ +++|++++++||.+|||+|+|||+
T Consensus 138 ~e~l~l~~~g~v~E~s~sNif~~~~~~~l~TP~~~~~~L~GitR~~ll~~~-----~v~e~~i~~~~L~~adevf~~ns~ 212 (221)
T 3qqm_A 138 DEVLLANERGEICEGTITNVFADFGDGVLATPRLDCGLLPGVLRAELLDEG-----RAEEAIYSYDDLKSAKALFVGNSL 212 (221)
T ss_dssp SEEEEEBTTSCEEEESSCEEEEECSSSCEEEECGGGTCCCCHHHHHHHHTT-----SEEEECCCHHHHTTCSEEEEEETT
T ss_pred cEEEEECCCCeEEEcCceeEEEEeCCCEEECCCCccCcchHHHHHHHHhhC-----cEEEEeCCHHHHHhCCEEEEEecc
Confidence 9999999999999999999999998 9999999999999999999999974 899999999999999999999999
Q ss_pred cceEEEEE
Q 028343 159 VGVNSVNS 166 (210)
Q Consensus 159 ~gi~pV~~ 166 (210)
+||+||+-
T Consensus 213 ~gi~pV~l 220 (221)
T 3qqm_A 213 RGLIPAKL 220 (221)
T ss_dssp TEEEEEEE
T ss_pred eeEEEEEE
Confidence 99999974
No 17
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus}
Probab=100.00 E-value=1.7e-35 Score=247.95 Aligned_cols=147 Identities=20% Similarity=0.238 Sum_probs=129.6
Q ss_pred CeEEEEEEecCCCcCcCCCCCcEEEEEEEecCCC----cCCceEEEEEeeeeecCCCCCCCCccccChHHHHHHHHHHHH
Q 028343 1 MYIRPLLMGSGPVLGVAPASEYTFITYASPVGNY----HKGLLNLIVEEKFRRAIPGGTGGVKAVTNYAIIYKPIAEAKA 76 (210)
Q Consensus 1 ~yiR~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~----~~~g~~~~~~~~~~r~~~~~l~~~K~~~~y~~~~~a~~ea~~ 76 (210)
.|||++++++++.+|+ .|.+.. +.+|+++.+++ . |..++ ++++|++ ||+.+++++++|++
T Consensus 79 ~~vR~~v~~g~~~~~~------------~p~~~~~~~~~~~g~~l~~~~-~-r~~~~-~~~~Kt~-n~~~~~~a~~~A~~ 142 (246)
T 2zgi_A 79 LRLRFTVGEGVRLSEA------------RPYAPLPLSLYREGVRVRLTG-Y-RVHPD-LARYKTG-NYLPYRLALEEARK 142 (246)
T ss_dssp EEEEEEEETTEEEEEE------------EECCCCCTHHHHHCBCEEEEE-E-ECCTT-TTTSCBS-CCHHHHHHHHHHHT
T ss_pred EEEEEEEECCCCccCc------------CcCCCCchhHhhcCeEEEEec-c-cCCCC-Cccchhh-hhHHHHHHHHHHHH
Confidence 3899999976544444 233221 13689998875 4 66676 8899997 89999999999999
Q ss_pred CCCCeEEEEcCCCcEEEeCceEEEEEECCEEEccCCCCCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhhhhhhhhcc
Q 028343 77 KGFTDVLFLNAEKYIEEVSTSNIFLVKGNEISTPPTSGTILPGITRKSIIEITHVLGYQVKERAIPVEELFDAEEVFCTG 156 (210)
Q Consensus 77 ~g~deal~ld~~g~v~E~~~sNlf~~~~~~l~TP~l~~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ade~f~tn 156 (210)
+|+||+||+|++|+|+|++++|+|+++||+|+|| .++|+||||+.++++|+++|++|+|++++++||.+ |+|+||
T Consensus 143 ~g~de~l~ld~~G~v~Egs~sNif~v~~g~l~TP---~~iL~GitR~~ll~~a~~~g~~v~E~~i~~~dL~~--evfltn 217 (246)
T 2zgi_A 143 EGAFEGLLLDAFGHVVDGSRTSPLLFREGTLYLL---EGGLEGITREKVAEAARGLGLRVERGLFRPEGLRG--HLLLAG 217 (246)
T ss_dssp TTCSEEEEECTTSCEEEESSSEEEEEETTEEEEE---CSSCCCHHHHHHHHHHHHTTCEEEEECCCGGGCCS--EEEEEE
T ss_pred cCCCEEEEECCCCCEEEcCCeEEEEEECCEEECC---CCccCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHh--hHeeec
Confidence 9999999999999999999999999999999999 88999999999999999999999999999999998 999999
Q ss_pred cccceEEEEEEE
Q 028343 157 TAVGVNSVNSIT 168 (210)
Q Consensus 157 s~~gi~pV~~I~ 168 (210)
|++||+||.+|+
T Consensus 218 s~~gi~pV~~id 229 (246)
T 2zgi_A 218 SGVGLLPVRPPP 229 (246)
T ss_dssp TTTEEEEBSSCC
T ss_pred ChhheEEEEEEC
Confidence 999999999984
No 18
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus}
Probab=99.96 E-value=9.7e-30 Score=205.79 Aligned_cols=100 Identities=17% Similarity=0.229 Sum_probs=92.9
Q ss_pred CCCCCCCCccccChHHHHHHHHHHHHCCCCeEEEEcCCCcEEEeCceEEEEEECCEEEccCCCCCCcccchHHHHHHHHH
Q 028343 51 IPGGTGGVKAVTNYAIIYKPIAEAKAKGFTDVLFLNAEKYIEEVSTSNIFLVKGNEISTPPTSGTILPGITRKSIIEITH 130 (210)
Q Consensus 51 ~~~~l~~~K~~~~y~~~~~a~~ea~~~g~deal~ld~~g~v~E~~~sNlf~~~~~~l~TP~l~~~~L~GitR~~vl~~a~ 130 (210)
.++.++++|++ ||+ ++++++|+++|+||+||+ ++|+|+|++++|+|+++||+|+||+ .++|+||||+.+++
T Consensus 95 ~~~~~~~~Kt~-n~~--~~~~~~A~~~g~de~l~l-~~G~v~E~s~sNif~~~~g~l~TP~--~~~L~GitR~~ll~--- 165 (194)
T 3ceb_A 95 CDHIDYSLKFS-DRT--LLNNLLKQKEECDEIMII-RQGKVTDCSIGNLIFRQNNQWITPD--KPLLEGTQRAKLLE--- 165 (194)
T ss_dssp CSSCCCSSCBS-CCH--HHHHHHGGGTTSSEEEEE-ETTEECCCSSSEEEEEETTEEEEES--SCSSCCHHHHHHHH---
T ss_pred CCCcchhhccc-CHH--HHHHHHHhhCCCCEEEEE-eCCEEEEeccEEEEEEECCEEECCC--CCCcChHHHHHHHc---
Confidence 45578899986 888 568889999999999999 8999999999999999999999999 78999999999998
Q ss_pred HcCCcEEEEecCHHHHhhhhhhhhcccccce
Q 028343 131 VLGYQVKERAIPVEELFDAEEVFCTGTAVGV 161 (210)
Q Consensus 131 ~~gi~v~e~~i~~~el~~ade~f~tns~~gi 161 (210)
+++|+|++++++||.+|||+|+|||++|+
T Consensus 166 --~~~v~e~~i~~~eL~~adevfl~ns~~gi 194 (194)
T 3ceb_A 166 --QKKIIAREIFFEDLAQYEEIRLINAMNGL 194 (194)
T ss_dssp --TTSSEEECCBGGGGGGCSCEEEEBTTBCC
T ss_pred --CCCEEEecCCHHHHhhccEEEEEecccCC
Confidence 57999999999999999999999999985
No 19
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=56.00 E-value=27 Score=23.56 Aligned_cols=48 Identities=10% Similarity=-0.040 Sum_probs=28.8
Q ss_pred HHHHHHHcCCcEEEEecCHHHHhhhhhhhhcccccceEEEEEEEecCeEE
Q 028343 125 IIEITHVLGYQVKERAIPVEELFDAEEVFCTGTAVGVNSVNSITYQDERI 174 (210)
Q Consensus 125 vl~~a~~~gi~v~e~~i~~~el~~ade~f~tns~~gi~pV~~I~~~~~~i 174 (210)
+.+++++.|++.++..+..+.- ..+++.-.+...--+|+.-|+ ||+.+
T Consensus 20 aK~~L~~~gi~y~~idi~~d~~-~~~~~~~~~~G~~tVP~I~i~-Dg~~l 67 (92)
T 2lqo_A 20 LKTALTANRIAYDEVDIEHNRA-AAEFVGSVNGGNRTVPTVKFA-DGSTL 67 (92)
T ss_dssp HHHHHHHTTCCCEEEETTTCHH-HHHHHHHHSSSSSCSCEEEET-TSCEE
T ss_pred HHHHHHhcCCceEEEEcCCCHH-HHHHHHHHcCCCCEeCEEEEe-CCEEE
Confidence 4566778899999999975432 223333223223457887764 45554
No 20
>3mcb_B Transcription factor BTF3; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens}
Probab=48.55 E-value=27 Score=21.86 Aligned_cols=43 Identities=21% Similarity=0.384 Sum_probs=30.3
Q ss_pred CCCCeEEEEcCCCcEEEe--------CceEEEEEECCEEEccCCCCCCcccch
Q 028343 77 KGFTDVLFLNAEKYIEEV--------STSNIFLVKGNEISTPPTSGTILPGIT 121 (210)
Q Consensus 77 ~g~deal~ld~~g~v~E~--------~~sNlf~~~~~~l~TP~l~~~~L~Git 121 (210)
.|.+|+-|.-++|.|... ..+|-|++.|. --|-++ ...||||-
T Consensus 5 ~gIeEVnmfk~dg~vihF~nPkVqaS~~aNTfvv~G~-~e~K~l-~e~lP~Il 55 (58)
T 3mcb_B 5 SGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGH-AETKQL-TEMLPSIL 55 (58)
T ss_dssp CCCCEEEEEETTSEEEEEESCEEEEETTTTEEEEESC-EEEEEG-GGGTTGGG
T ss_pred CCeeEEEEEecCCEEEEecCcceEEeeccceEEEecC-CeeeEH-HHHChhhh
Confidence 478898888888888776 45899999774 333344 44777774
No 21
>3lkx_A Transcription factor BTF3; beta-barrel, chaperone; 2.50A {Homo sapiens}
Probab=45.51 E-value=26 Score=22.59 Aligned_cols=44 Identities=20% Similarity=0.378 Sum_probs=30.1
Q ss_pred CCCCeEEEEcCCCcEEEe--------CceEEEEEECCEEEccCCCCCCcccchH
Q 028343 77 KGFTDVLFLNAEKYIEEV--------STSNIFLVKGNEISTPPTSGTILPGITR 122 (210)
Q Consensus 77 ~g~deal~ld~~g~v~E~--------~~sNlf~~~~~~l~TP~l~~~~L~GitR 122 (210)
.|.+|+-|+-++|.|... ..+|-|++.|. --|-++ ...||||--
T Consensus 5 ~gIeEVnmfk~dg~vihF~nPkVqaS~~aNT~vv~G~-~e~K~l-~ellP~Il~ 56 (66)
T 3lkx_A 5 SGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGH-AETKQL-TEMLPSILN 56 (66)
T ss_dssp CCEEEEEEEETTSEEEEEESCEEEEECC-CEEEEESC-EEEEEG-GGGTTGGGG
T ss_pred CCeeEEEEEecCCEEEEecCcceEEeeccCeeEecCC-CEEeEH-HHHChhhhh
Confidence 467888888778888776 45899999875 333344 457888754
No 22
>2lfw_B NEPR anti sigma factor; signal transduction, response regulator, sigma factor mimicr sigma factor, general stress response, signaling protein; NMR {Sphingomonas SP}
Probab=42.77 E-value=20 Score=22.81 Aligned_cols=25 Identities=16% Similarity=0.210 Sum_probs=21.9
Q ss_pred CccHHHHHHHHHHHHhHccCCCCCC
Q 028343 179 GAGTVGQKLYEMVTGIQTGRIEDKM 203 (210)
Q Consensus 179 ~~g~~t~~L~~~~~~~~~g~~~~~~ 203 (210)
..+.+..+|+..|.+++...++|.+
T Consensus 24 ~~~~Ig~~LR~~Yd~vv~E~VPDrF 48 (62)
T 2lfw_B 24 KDRDMGAALRSAYQKTIEEQVPDEM 48 (62)
T ss_dssp SSTTHHHHHHHHHHTTTSSCCCCTT
T ss_pred hHHHHHHHHHHHHHHHhccCCCHHH
Confidence 3578999999999999999998865
No 23
>2l09_A ASR4154 protein; proto-chlorophyllide reductase 57 KD subunit superfamily, ST genomics, PSI-2, protein structure initiative; NMR {Nostoc SP}
Probab=40.81 E-value=16 Score=23.25 Aligned_cols=36 Identities=11% Similarity=0.048 Sum_probs=28.4
Q ss_pred CcccchHHHHHHHHHHcCCcEEEEecCHHHHhhhhhhhhc
Q 028343 116 ILPGITRKSIIEITHVLGYQVKERAIPVEELFDAEEVFCT 155 (210)
Q Consensus 116 ~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ade~f~t 155 (210)
.+.|-.|+.+-+.|++.|+ ..|+++.+..|.+-|.+
T Consensus 19 FVR~kvrr~tE~~Are~G~----~~IT~ev~~~AK~~~~~ 54 (62)
T 2l09_A 19 FARSQAKARIEQLARQAEQ----DIVTPELVEQARLEFGQ 54 (62)
T ss_dssp GGHHHHHHHHHHHHHHTTC----SEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC----CeEcHHHHHHHHHHHhh
Confidence 4566667777788999997 57899999999987753
No 24
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=39.50 E-value=55 Score=20.55 Aligned_cols=48 Identities=13% Similarity=-0.086 Sum_probs=27.6
Q ss_pred HHHHHHHHcCCcEEEEecCHHHHh-hhhhhhhccccc-----ceEEEEEEEecCeEE
Q 028343 124 SIIEITHVLGYQVKERAIPVEELF-DAEEVFCTGTAV-----GVNSVNSITYQDERI 174 (210)
Q Consensus 124 ~vl~~a~~~gi~v~e~~i~~~el~-~ade~f~tns~~-----gi~pV~~I~~~~~~i 174 (210)
.+..++++.|++.++..+...+-. ..+++.--+ -. .-+|+.-| +|+.+
T Consensus 19 ~~~~~L~~~~i~~~~~~vd~~~~~~~~~el~~~~-g~~~~~~~~vP~i~i--~g~~i 72 (89)
T 3msz_A 19 WAKQWFEENNIAFDETIIDDYAQRSKFYDEMNQS-GKVIFPISTVPQIFI--DDEHI 72 (89)
T ss_dssp HHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHTT-TCCSSCCCSSCEEEE--TTEEE
T ss_pred HHHHHHHHcCCCceEEEeecCCChhHHHHHHHHh-CCCCCCCCccCEEEE--CCEEE
Confidence 345677788999888877654322 123322211 12 45788766 57776
No 25
>2qho_B E3 ubiquitin-protein ligase EDD1; protein-protein complex, protein binding/ligase complex; 1.85A {Homo sapiens}
Probab=35.14 E-value=15 Score=22.27 Aligned_cols=22 Identities=27% Similarity=0.360 Sum_probs=18.6
Q ss_pred CCcccchHHHHHHHHHHcCCcE
Q 028343 115 TILPGITRKSIIEITHVLGYQV 136 (210)
Q Consensus 115 ~~L~GitR~~vl~~a~~~gi~v 136 (210)
..|+|.+|+.|++.++..++.|
T Consensus 18 ~VLqgksR~vIirELqrTnLdV 39 (53)
T 2qho_B 18 VVLQGKSRSVIIRELQRTNLDV 39 (53)
T ss_dssp HHSTTCCHHHHHHHHHHTTTCH
T ss_pred HHhcCCcHHHHHHHHHHhCccH
Confidence 4699999999999888877754
No 26
>3tql_A Arginine-binding protein; transport and binding proteins, transport protein; HET: MSE ARG; 1.59A {Coxiella burnetii} SCOP: c.94.1.0
Probab=31.16 E-value=60 Score=23.79 Aligned_cols=35 Identities=9% Similarity=0.110 Sum_probs=30.2
Q ss_pred CCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhh
Q 028343 114 GTILPGITRKSIIEITHVLGYQVKERAIPVEELFD 148 (210)
Q Consensus 114 ~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ 148 (210)
.|-..|+.-+.+-++++++|++++....+..++..
T Consensus 21 ~g~~~G~~~dl~~~i~~~~g~~~~~~~~~~~~~~~ 55 (227)
T 3tql_A 21 SGQVEGFGADIVKAVCKQMQAVCTISNQPWDSLIP 55 (227)
T ss_dssp -CCEESHHHHHHHHHHHHTTCEEEEEECCHHHHHH
T ss_pred CCCcccchHHHHHHHHHHhCCeEEEEeCCHHHHHH
Confidence 56789999999999999999999999988877654
No 27
>2kyr_A Fructose-like phosphotransferase enzyme IIB compo; ALP protein, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=29.99 E-value=32 Score=24.47 Aligned_cols=45 Identities=13% Similarity=0.197 Sum_probs=31.5
Q ss_pred CCCcccchHHHHH-HHHHHcCCcEEE---------EecCHHHHhhhhhhhhcccc
Q 028343 114 GTILPGITRKSII-EITHVLGYQVKE---------RAIPVEELFDAEEVFCTGTA 158 (210)
Q Consensus 114 ~~~L~GitR~~vl-~~a~~~gi~v~e---------~~i~~~el~~ade~f~tns~ 158 (210)
.|+-...+-...| +.|+++|+++.. ..++.+|+.+||-+.+.+..
T Consensus 16 tGiAHTyMAAeaL~~aA~~~G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~ 70 (111)
T 2kyr_A 16 MGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAV 70 (111)
T ss_dssp SCHHHHHHHHHHHHHHHHHTSSEEEEEEEETTEEESCCCHHHHHHCSEEEEEESS
T ss_pred CcHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCcCCCCCHHHHHhCCEEEEEeCC
Confidence 4444444444444 567889997765 36999999999988887664
No 28
>4gf0_A Glutathione S-transferase; GST, enzyme function initiative, EFI, structural genomics; HET: GSH; 1.75A {Sulfitobacter}
Probab=29.44 E-value=93 Score=23.29 Aligned_cols=60 Identities=5% Similarity=0.006 Sum_probs=38.2
Q ss_pred HHHHcCCcEEEEecCHHHHhhhhhhhhcccccceEEEEEEEecCeEEeecCCccHHHHHHHHHH
Q 028343 128 ITHVLGYQVKERAIPVEELFDAEEVFCTGTAVGVNSVNSITYQDERIEYKRGAGTVGQKLYEMV 191 (210)
Q Consensus 128 ~a~~~gi~v~e~~i~~~el~~ade~f~tns~~gi~pV~~I~~~~~~i~~~~~~g~~t~~L~~~~ 191 (210)
++++.|++.+...+.+..-.+..+-|+.-+-.|-+||-.++ +|..+ + ....+++-|.+.|
T Consensus 20 ~L~e~gl~ye~~~v~~~~~~~~~~~~l~~nP~g~vP~L~~d-~g~~l-~--ES~aI~~YL~~~~ 79 (215)
T 4gf0_A 20 AIEEAALPYQPVRVDFATAEQTKPDYLAINPKGRVPALRLE-DDTIL-T--ETGALLDYVAAIA 79 (215)
T ss_dssp HHHHTTCCEEEEECCGGGTGGGSHHHHTTCTTCCSCEEECT-TSCEE-E--CHHHHHHHHHHHC
T ss_pred HHHHhCCCCEEEEECCCCCccCCHHHHHhCCCCCcceEEec-CCcEE-e--chHHHHHHHHHhC
Confidence 46678999999999876544444456655567999997764 35554 2 2455555554443
No 29
>3h7m_A Sensor protein; histidine kinase sensor domain, kinase, phosphoprotein, transferase; 2.40A {Geobacter sulfurreducens} SCOP: c.94.1.0
Probab=28.30 E-value=58 Score=24.06 Aligned_cols=36 Identities=22% Similarity=0.233 Sum_probs=30.8
Q ss_pred CCCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhh
Q 028343 113 SGTILPGITRKSIIEITHVLGYQVKERAIPVEELFD 148 (210)
Q Consensus 113 ~~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ 148 (210)
..|-..|+.-+.+-++++++|++++....+.+++..
T Consensus 29 ~~g~~~G~~~dl~~~i~~~~g~~~~~~~~~~~~~~~ 64 (234)
T 3h7m_A 29 QNGKPAGYNVELTRAIAEVMGMTVEFRLGAWSEMFS 64 (234)
T ss_dssp TTSCEESHHHHHHHHHHHHHTCCEEEEEECGGGHHH
T ss_pred CCCCEeeeEHHHHHHHHHHcCCceEEEeCCHHHHHH
Confidence 467789999999999999999999998888777654
No 30
>2kru_A Light-independent protochlorophyllide reductase subunit B; NESG, PSI, BCHB, bacteriochlorophyll biosynthesis, chlorophyll biosynthesis; NMR {Chlorobaculum tepidum}
Probab=27.99 E-value=34 Score=21.81 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=27.0
Q ss_pred cccchHHHHHHHHHHcCCcEEEEecCHHHHhhhhhhhhc
Q 028343 117 LPGITRKSIIEITHVLGYQVKERAIPVEELFDAEEVFCT 155 (210)
Q Consensus 117 L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ade~f~t 155 (210)
+.|-.|+.+-+.|++.|+ ..|+++.+..|.+-|.+
T Consensus 21 VR~kvrr~tE~~Are~G~----~~IT~ev~~~AK~~~~~ 55 (63)
T 2kru_A 21 VRKKVRKNTDNYAREIGE----PVVTADVFRKAKEHLGG 55 (63)
T ss_dssp HHHHHHHHHHHHHHHHTC----SEECHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCC----CeEcHHHHHHHHHHhhh
Confidence 445566666778888997 57899999999987754
No 31
>4h5g_A Amino acid ABC superfamily ATP binding cassette transporter, binding protein; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: ARG; 1.78A {Streptococcus pneumoniae} PDB: 4h5f_A*
Probab=26.79 E-value=43 Score=25.60 Aligned_cols=35 Identities=11% Similarity=0.202 Sum_probs=30.2
Q ss_pred CCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhh
Q 028343 114 GTILPGITRKSIIEITHVLGYQVKERAIPVEELFD 148 (210)
Q Consensus 114 ~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ 148 (210)
.|-+.|+.-+.+-++++++|++++....+.+++..
T Consensus 34 ~g~~~G~~vdl~~~ia~~lg~~~~~~~~~~~~~~~ 68 (243)
T 4h5g_A 34 KNQVVGADIDMAQAIADELGVKLEILSMSFDNVLT 68 (243)
T ss_dssp EEEEESHHHHHHHHHHHHHTSEEEEEECCGGGHHH
T ss_pred CCcEEEeHHHHHHHHHHHhCCceEEecccHHHHHH
Confidence 46688999999999999999999999988777654
No 32
>4gvo_A LMO2349 protein; structural genomics, IDP05245, L-cystine, ABC transporter, periplasmic binding protein, niaid; HET: HIS; 1.45A {Listeria monocytogenes} PDB: 2o1m_A
Probab=26.29 E-value=58 Score=24.85 Aligned_cols=36 Identities=25% Similarity=0.375 Sum_probs=30.2
Q ss_pred CCCCcccchHHHHHHHHHHc-CCcEEEEecCHHHHhh
Q 028343 113 SGTILPGITRKSIIEITHVL-GYQVKERAIPVEELFD 148 (210)
Q Consensus 113 ~~~~L~GitR~~vl~~a~~~-gi~v~e~~i~~~el~~ 148 (210)
..|-+.|+.-+.+-++++++ |++++....+.+++..
T Consensus 27 ~~G~~~G~~vdl~~~ia~~l~g~~~~~~~~~~~~~~~ 63 (243)
T 4gvo_A 27 ENGKLTGYDVELVKEIDKRLPGYKFKFKTMDFSNLLV 63 (243)
T ss_dssp TTSCEESHHHHHHHHHHHTCTTEEEEEEECCGGGHHH
T ss_pred CCCcEEEhHHHHHHHHHHhccCCeEEEEECCHHHHHH
Confidence 46778999999999999996 9999999988776653
No 33
>2y7i_A STM4351; arginine-binding protein; HET: ARG; 1.90A {Salmonella enterica subsp}
Probab=25.17 E-value=81 Score=23.18 Aligned_cols=35 Identities=6% Similarity=0.047 Sum_probs=29.7
Q ss_pred CCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhh
Q 028343 114 GTILPGITRKSIIEITHVLGYQVKERAIPVEELFD 148 (210)
Q Consensus 114 ~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ 148 (210)
.|-+.|+.-+.+-++++++|++++....+..++..
T Consensus 25 ~g~~~G~~~dl~~~i~~~~g~~~~~~~~~~~~~~~ 59 (229)
T 2y7i_A 25 DNKIVGFDIDVANAVCKEMQAECSFTNQSFDSLIP 59 (229)
T ss_dssp TSCEESHHHHHHHHHHHHTTCEEEEEECCGGGHHH
T ss_pred CCCCcceeHHHHHHHHHHhCCeEEEEEcCHHHHHH
Confidence 57789999999999999999999988887766543
No 34
>4f3p_A Glutamine-binding periplasmic protein; ssgcid, structural genomics, GLUT seattle structural genomics center for infectious disease; 2.40A {Burkholderia pseudomallei}
Probab=24.52 E-value=59 Score=24.64 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=29.9
Q ss_pred CCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhh
Q 028343 114 GTILPGITRKSIIEITHVLGYQVKERAIPVEELFD 148 (210)
Q Consensus 114 ~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ 148 (210)
.|-+.|+.-+.+-++++++|++++....+..++..
T Consensus 42 ~g~~~G~~~dl~~~i~~~~g~~~~~~~~~~~~~~~ 76 (249)
T 4f3p_A 42 GDKYVGFDLDLWAEIAKGAGWTYKIQPMDFAGLIP 76 (249)
T ss_dssp TTEEESHHHHHHHHHHHHHTCCEEEEEECGGGHHH
T ss_pred CCeEEEEhHHHHHHHHHHcCCceEEEecCHHHHHH
Confidence 67788999999999999999999998887766653
No 35
>1axd_A Glutathione S-transferase I; transferase, herbicide detoxification, transferase-transfera inhibitor complex; HET: GGL CYW; 2.50A {Zea mays} SCOP: a.45.1.1 c.47.1.5 PDB: 1bye_A*
Probab=23.74 E-value=1.4e+02 Score=21.81 Aligned_cols=59 Identities=7% Similarity=-0.115 Sum_probs=36.9
Q ss_pred HHHHcCCcEEEEecCHHHHhhhhhhhhcccccceEEEEEEEecCeEEeecCCccHHHHHHHHHH
Q 028343 128 ITHVLGYQVKERAIPVEELFDAEEVFCTGTAVGVNSVNSITYQDERIEYKRGAGTVGQKLYEMV 191 (210)
Q Consensus 128 ~a~~~gi~v~e~~i~~~el~~ade~f~tns~~gi~pV~~I~~~~~~i~~~~~~g~~t~~L~~~~ 191 (210)
.+++.|++.+...+...+-....+-|.--+-.|-+||-.. +|..+. ....+.+-|.+.|
T Consensus 20 ~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~g~vP~L~~--~g~~l~---eS~aI~~yL~~~~ 78 (209)
T 1axd_A 20 ALEEAGSDYEIVPINFATAEHKSPEHLVRNPFGQVPALQD--GDLYLF---ESRAICKYAARKN 78 (209)
T ss_dssp HHHHHTCCEEEECCCTTTTGGGSHHHHTTCTTCCSCEEEE--TTEEEE---SHHHHHHHHHHHH
T ss_pred HHHhcCCCCEEEeccccccCcCChHHHHhCcCCCCCeEEE--CCEEEe---cHHHHHHHHHHhc
Confidence 4556799999998876543233344544445789999764 566652 3556666665554
No 36
>3kzg_A Arginine 3RD transport system periplasmic binding protein; arginine transport system, protein structure initiative II(PSI II); 2.06A {Legionella pneumophila subsp} SCOP: c.94.1.0
Probab=23.22 E-value=94 Score=23.15 Aligned_cols=36 Identities=22% Similarity=0.221 Sum_probs=31.0
Q ss_pred CCCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhh
Q 028343 113 SGTILPGITRKSIIEITHVLGYQVKERAIPVEELFD 148 (210)
Q Consensus 113 ~~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ 148 (210)
..|-+.|+.-+.+-++++++|++++....+.+++..
T Consensus 22 ~~g~~~G~~~dl~~~i~~~~g~~~~~~~~~~~~~~~ 57 (237)
T 3kzg_A 22 NNSSLYGFDIDLMQEICRRLHATCTFEAYIFDDLFP 57 (237)
T ss_dssp TTSCCBSHHHHHHHHHHHHTTCEEEEEEECGGGHHH
T ss_pred CCCCEeeehHHHHHHHHHHhCCceEEEEcCHHHHHH
Confidence 467789999999999999999999999888777654
No 37
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=22.42 E-value=46 Score=23.39 Aligned_cols=45 Identities=16% Similarity=0.247 Sum_probs=31.7
Q ss_pred CCCcccchHHHHHH-HHHHcCCcEEE---------EecCHHHHhhhhhhhhcccc
Q 028343 114 GTILPGITRKSIIE-ITHVLGYQVKE---------RAIPVEELFDAEEVFCTGTA 158 (210)
Q Consensus 114 ~~~L~GitR~~vl~-~a~~~gi~v~e---------~~i~~~el~~ade~f~tns~ 158 (210)
.|+-...|-...|+ .|+++|+++.. ..++.+|+.+||-+.+.+..
T Consensus 13 tGiAhTymAaeaL~~aA~~~G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~ 67 (106)
T 2r4q_A 13 TGIAHTFMAADALKEKAKELGVEIKVETNGSSGIKHKLTAQEIEDAPAIIVAADK 67 (106)
T ss_dssp CC--CHHHHHHHHHHHHHHHTCCEEEEEEETTEEESCCCHHHHHHCSCEEEEESS
T ss_pred CcHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCccCCCCHHHHHhCCEEEEEeCC
Confidence 55666666555554 67789987654 35999999999988887664
No 38
>4iel_A Glutathione S-transferase, N-terminal domain PROT; GST, glutathione S-transferase, enzyme function initiative, structural genomics; HET: GSH; 1.60A {Burkholderia ambifaria}
Probab=22.08 E-value=1.8e+02 Score=21.93 Aligned_cols=59 Identities=8% Similarity=-0.033 Sum_probs=34.4
Q ss_pred HHHHcCCcEEEEecCHHHHhhhhhhhhcccccceEEEEEEEecCeEEeecCCccHHHHHHHHHH
Q 028343 128 ITHVLGYQVKERAIPVEELFDAEEVFCTGTAVGVNSVNSITYQDERIEYKRGAGTVGQKLYEMV 191 (210)
Q Consensus 128 ~a~~~gi~v~e~~i~~~el~~ade~f~tns~~gi~pV~~I~~~~~~i~~~~~~g~~t~~L~~~~ 191 (210)
+++..|++.+...+.+..-....+-|.--+-.|-+||-.. +|..+. ....+.+-|.+.|
T Consensus 41 ~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~P~g~vP~L~~--~g~~l~---eS~aI~~yL~~~~ 99 (229)
T 4iel_A 41 LCTELNLPFEQEDWGAGFRTTNDPAYLALNPNGLVPVIKD--DGFVLW---ESNTIIRYLANRY 99 (229)
T ss_dssp HHHHHTCCEEEECCC-------CHHHHTTCTTCCSCEEEE--TTEEEE---CHHHHHHHHHHHH
T ss_pred HHHHCCCCcEEEEecCCcCCcCCHHHHhcCCCCCCCEEEE--CCEEEE---eHHHHHHHHHHhc
Confidence 4566799999999876432233334554455788999765 466652 3456666665554
No 39
>3zua_A CLD, alpha-hemolysin translocation ATP-binding protein; C39 peptidase-like domain, ABC transporter, haemolysin, HYDR heteronuclear; NMR {Escherichia coli}
Probab=21.81 E-value=77 Score=22.50 Aligned_cols=32 Identities=19% Similarity=0.174 Sum_probs=28.6
Q ss_pred ccchHHHHHHHHHHcCCcEEEEecCHHHHhhh
Q 028343 118 PGITRKSIIEITHVLGYQVKERAIPVEELFDA 149 (210)
Q Consensus 118 ~GitR~~vl~~a~~~gi~v~e~~i~~~el~~a 149 (210)
.|++...+.+.|++.|+..+....++++|...
T Consensus 44 ~g~s~~~l~~aa~~~Gl~a~~~~~~~~~L~~l 75 (142)
T 3zua_A 44 TGLGLTSWLLAAKSLELKVKQVKKTIDRLNFI 75 (142)
T ss_dssp SCCCHHHHHHHHHTTTEEEEEEECCHHHHTTS
T ss_pred CCcCHHHHHHHHHHCCCeeEEeecCHHHHhcC
Confidence 57888999999999999999999999999764
No 40
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=21.73 E-value=46 Score=23.39 Aligned_cols=45 Identities=16% Similarity=0.226 Sum_probs=31.8
Q ss_pred CCCcccchHHHHH-HHHHHcCCcEEE---------EecCHHHHhhhhhhhhcccc
Q 028343 114 GTILPGITRKSII-EITHVLGYQVKE---------RAIPVEELFDAEEVFCTGTA 158 (210)
Q Consensus 114 ~~~L~GitR~~vl-~~a~~~gi~v~e---------~~i~~~el~~ade~f~tns~ 158 (210)
.|+-...|-...| +.|+++|+++.. ..++.+|+.+||-+.+.+..
T Consensus 13 tGiAhTymAaeaL~~aA~~~G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~ 67 (106)
T 2r48_A 13 NGIAHTYMAAENLQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIIIAADR 67 (106)
T ss_dssp SCSHHHHHHHHHHHHHHHHHTCEEEEEEEETTEEESCCCHHHHHHCSEEEEEESS
T ss_pred CcHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCccCCCCHHHHHhCCEEEEEeCC
Confidence 4555555555555 467789987654 35999999999988887663
No 41
>4eq9_A ABC transporter substrate-binding protein-amino A transport; structural genomics, niaid; HET: GSH; 1.40A {Streptococcus pneumoniae}
Probab=21.73 E-value=66 Score=24.01 Aligned_cols=39 Identities=21% Similarity=0.180 Sum_probs=33.1
Q ss_pred cCCC---CCCcccchHHHHHHHHHHcC-CcEEEEecCHHHHhh
Q 028343 110 PPTS---GTILPGITRKSIIEITHVLG-YQVKERAIPVEELFD 148 (210)
Q Consensus 110 P~l~---~~~L~GitR~~vl~~a~~~g-i~v~e~~i~~~el~~ 148 (210)
||.. .|-+.|+.-+.+-++++++| ++++....+.+++..
T Consensus 19 ~P~~~~~~g~~~G~~~dl~~~i~~~~g~~~~~~~~~~~~~~~~ 61 (246)
T 4eq9_A 19 RPFIYEENGELTGYEIEVVRAIFKDSDKYDVKFEKTEWSGVFA 61 (246)
T ss_dssp TTTSEEETTEEESHHHHHHHHHHTTCSSEEEEEEECCHHHHHH
T ss_pred CCeEEcCCCCCcccHHHHHHHHHHHcCCceEEEEeCCHHHHHH
Confidence 5554 67789999999999999999 999999998887765
No 42
>1gnw_A Glutathione S-transferase; herbicide detoxification; HET: GTX; 2.20A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5 PDB: 1bx9_A*
Probab=21.71 E-value=1.6e+02 Score=21.52 Aligned_cols=61 Identities=10% Similarity=0.040 Sum_probs=38.0
Q ss_pred HHHHHHcCCcEEEEecCHHHHhhhhhhhhcccccceEEEEEEEecCeEEeecCCccHHHHHHHHHH
Q 028343 126 IEITHVLGYQVKERAIPVEELFDAEEVFCTGTAVGVNSVNSITYQDERIEYKRGAGTVGQKLYEMV 191 (210)
Q Consensus 126 l~~a~~~gi~v~e~~i~~~el~~ade~f~tns~~gi~pV~~I~~~~~~i~~~~~~g~~t~~L~~~~ 191 (210)
.-.+++.|++.+...+.+.+-....+-|.--+-.|-+||-.. +|..+. ....+.+-|.+.|
T Consensus 18 ~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~g~vP~L~~--~g~~l~---eS~aI~~yL~~~~ 78 (211)
T 1gnw_A 18 LIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFED--GDLKLF---ESRAITQYIAHRY 78 (211)
T ss_dssp HHHHHHTTCCCEEEECCGGGTGGGSTTGGGTCTTCCSCEEEE--TTEEEE---CHHHHHHHHHHHT
T ss_pred HHHHHhcCCCcEEEEeccccccccCHHHHHhCCCCCCCEEEE--CCEEEe---CHHHHHHHHHHHc
Confidence 335667899999998887543333344554456789999764 566552 2455555555544
No 43
>2q88_A EHUB, putative ABC transporter amino acid-binding prote; substrate-binding protein, compatible solues, ABC-transporte osmoprotection; HET: 4CS; 1.90A {Sinorhizobium meliloti} PDB: 2q89_A*
Probab=21.53 E-value=1.1e+02 Score=22.96 Aligned_cols=35 Identities=17% Similarity=0.134 Sum_probs=29.5
Q ss_pred CCCcccchHHHHHHHHHHcCCc-EEEEecCHHHHhh
Q 028343 114 GTILPGITRKSIIEITHVLGYQ-VKERAIPVEELFD 148 (210)
Q Consensus 114 ~~~L~GitR~~vl~~a~~~gi~-v~e~~i~~~el~~ 148 (210)
.|-+.|+.-+.+-++++++|++ ++....+.+++..
T Consensus 31 ~g~~~G~~~dl~~~i~~~~g~~~~~~~~~~~~~~~~ 66 (257)
T 2q88_A 31 DGKVSGAAPDVAREIFKRLGVADVVASISEYGAMIP 66 (257)
T ss_dssp TCCEESHHHHHHHHHHHHTTCCEEEEEECCGGGHHH
T ss_pred CCCcccccHHHHHHHHHHcCCCeeeEEeCCHHHHHH
Confidence 5678999999999999999998 9988887666544
No 44
>3i6v_A Periplasmic His/Glu/Gln/Arg/opine family-binding; structural genomics, transporter, PSI-2, protein structure initiative; HET: LYS; 2.00A {Silicibacter pomeroyi} SCOP: c.94.1.0
Probab=21.50 E-value=88 Score=23.45 Aligned_cols=35 Identities=11% Similarity=0.051 Sum_probs=30.9
Q ss_pred CCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhh
Q 028343 114 GTILPGITRKSIIEITHVLGYQVKERAIPVEELFD 148 (210)
Q Consensus 114 ~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ 148 (210)
.|-+.|+.-+.+-++++++|++++....+.+++..
T Consensus 24 ~g~~~G~~~dl~~~i~~~~g~~~~~~~~~~~~~~~ 58 (232)
T 3i6v_A 24 AGEVDGFERELGDELCKRAGLTCEWVKNDWDSIIP 58 (232)
T ss_dssp TSCEESHHHHHHHHHHHHHTCCEEEEECCGGGHHH
T ss_pred CCCEeeehHHHHHHHHHHcCCceEEEECCHHHHHH
Confidence 57889999999999999999999999988877654
No 45
>1r5a_A Glutathione transferase; glutathione S-transferase, GST, GSH, mosquito, detoxification, xenobiotics; HET: GTS; 2.50A {Anopheles cracens} SCOP: a.45.1.1 c.47.1.5
Probab=21.01 E-value=2.2e+02 Score=21.02 Aligned_cols=62 Identities=6% Similarity=0.032 Sum_probs=37.5
Q ss_pred HHHHHHHcCCcEEEEecCHHHHhhhhhhhhcccccceEEEEEEEecCeEEeecCCccHHHHHHHHHH
Q 028343 125 IIEITHVLGYQVKERAIPVEELFDAEEVFCTGTAVGVNSVNSITYQDERIEYKRGAGTVGQKLYEMV 191 (210)
Q Consensus 125 vl~~a~~~gi~v~e~~i~~~el~~ade~f~tns~~gi~pV~~I~~~~~~i~~~~~~g~~t~~L~~~~ 191 (210)
+.-.+++.|++.+...+.+.+-....+-|.-.+-.|-+||-. + +|..+. ....+.+-|.+.|
T Consensus 17 v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~nP~g~vP~L~-~-~g~~l~---eS~aI~~yL~~~~ 78 (218)
T 1r5a_A 17 VLLLAKMIGVELDLKVLNIMEGEQLKPDFVELNPQHCIPTMD-D-HGLVLW---ESRVILSYLVSAY 78 (218)
T ss_dssp HHHHHHHTTCCEEEEECCTTTTGGGSHHHHTTCTTCCSSEEE-E-TTEEEE---CHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCeEEecCcccccccCHHHHhhCCCCCcCEEE-E-CCEEEE---cHHHHHHHHHHHc
Confidence 333566789999999887643222333455445578899976 3 566552 3455655555544
No 46
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=21.01 E-value=53 Score=21.94 Aligned_cols=30 Identities=17% Similarity=0.107 Sum_probs=23.0
Q ss_pred ccchHHHHHHHHHHcCCcEEEEecCHHHHh
Q 028343 118 PGITRKSIIEITHVLGYQVKERAIPVEELF 147 (210)
Q Consensus 118 ~GitR~~vl~~a~~~gi~v~e~~i~~~el~ 147 (210)
.|-.-..|++.|++.|+++.|.+--...|.
T Consensus 25 ~~~~A~~I~~~A~e~~VPi~e~~~LAr~L~ 54 (83)
T 3bzy_B 25 KDAKALQIIKLAELYDIPVIEDIPLARSLD 54 (83)
T ss_dssp ETHHHHHHHHHHHHTTCCEEECHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCEEeCHHHHHHHH
Confidence 466778899999999999998765444444
No 47
>3ein_A GST class-theta, glutathione S-transferase 1-1; delta-class GST; HET: GSH; 1.13A {Drosophila melanogaster} PDB: 3mak_A* 3f6f_A 3gh6_A* 1jlv_A*
Probab=20.96 E-value=1.8e+02 Score=21.39 Aligned_cols=59 Identities=7% Similarity=-0.019 Sum_probs=38.4
Q ss_pred HHHHcCCcEEEEecCHHHHhhhhhhhhcccccceEEEEEEEecCeEEeecCCccHHHHHHHHHH
Q 028343 128 ITHVLGYQVKERAIPVEELFDAEEVFCTGTAVGVNSVNSITYQDERIEYKRGAGTVGQKLYEMV 191 (210)
Q Consensus 128 ~a~~~gi~v~e~~i~~~el~~ade~f~tns~~gi~pV~~I~~~~~~i~~~~~~g~~t~~L~~~~ 191 (210)
+++..|++.+...+.+.+-....+-|.--+-.|-+||-.. +|..+. ....+.+-|.+.|
T Consensus 19 ~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~P~g~vP~L~~--~g~~l~---eS~aI~~yL~~~~ 77 (209)
T 3ein_A 19 TAKAVGVELNKKLLNLQAGEHLKPEFLKINPQHTIPTLVD--NGFALW---ESRAIQVYLVEKY 77 (209)
T ss_dssp HHHHHTCCCEEEECCGGGTGGGSHHHHTTCTTCCSCEEEE--TTEEEE---CHHHHHHHHHHHH
T ss_pred HHHHcCCCcEEEEcccccCCcCCHHHHhcCCCCCCCEEEE--CCEEEE---cHHHHHHHHHHhc
Confidence 4556799999999987654443445555556789999753 566652 3456666665555
No 48
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A*
Probab=20.76 E-value=55 Score=23.79 Aligned_cols=45 Identities=13% Similarity=0.168 Sum_probs=33.3
Q ss_pred ccchHHHHHHHHHHcCCcEEEEec---CHHHHhhhhhhhhccccc--ceEE
Q 028343 118 PGITRKSIIEITHVLGYQVKERAI---PVEELFDAEEVFCTGTAV--GVNS 163 (210)
Q Consensus 118 ~GitR~~vl~~a~~~gi~v~e~~i---~~~el~~ade~f~tns~~--gi~p 163 (210)
-|.|++..-.+++.+|. ++..++ ..+++.++|-+++..++. |..|
T Consensus 12 tGnT~~~A~~ia~~lg~-~~~~~~~~~~~~~l~~~d~ii~g~pt~~~g~~p 61 (164)
T 2bmv_A 12 SGNAEAIAEKISKAIGN-AEVVDVAKASKEQFNSFTKVILVAPTAGAGDLQ 61 (164)
T ss_dssp SSHHHHHHHHHHHHHCS-EEEEEGGGCCHHHHTTCSEEEEEEEEETTTEEC
T ss_pred CchHHHHHHHHHHHcCC-cEEEecccCCHhHHhhCCEEEEEECCcCCCcCc
Confidence 49999999999998887 665555 466788888777766654 5565
No 49
>2h8b_A Insulin-like 3; insulin/relaxin suparfamily fold, hormone/growth factor complex; NMR {Synthetic} PDB: 2k6t_A 2k6u_A
Probab=20.68 E-value=12 Score=19.33 Aligned_cols=16 Identities=19% Similarity=0.378 Sum_probs=12.7
Q ss_pred CCCcccchHHHHHHHH
Q 028343 114 GTILPGITRKSIIEIT 129 (210)
Q Consensus 114 ~~~L~GitR~~vl~~a 129 (210)
..+|.|.||+-+|.++
T Consensus 9 ~CClsGCt~QDLL~lC 24 (26)
T 2h8b_A 9 YCCLSGCTQQDLLTLC 24 (26)
T ss_dssp HHHHTCBCHHHHHTTC
T ss_pred HHHhcCCcHHHHHhhC
Confidence 4578999999988654
No 50
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=20.47 E-value=1.3e+02 Score=19.54 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=27.1
Q ss_pred chHHHHHHHHHHcCCcEEEEecCHHHHhhhhhhh
Q 028343 120 ITRKSIIEITHVLGYQVKERAIPVEELFDAEEVF 153 (210)
Q Consensus 120 itR~~vl~~a~~~gi~v~e~~i~~~el~~ade~f 153 (210)
-+...+..+|++.++|+..-. +..||..|-..-
T Consensus 40 ~~~~~i~~lc~~~~Ip~~~v~-sk~eLG~a~Gk~ 72 (82)
T 3v7e_A 40 ILTSSVVSLAEDQGISVSMVE-SMKKLGKACGIE 72 (82)
T ss_dssp HHHHHHHHHHHHHTCCEEEES-CHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHcCCCEEEEC-CHHHHHHHhCCC
Confidence 367788899999999999887 999998875443
No 51
>4dz1_A DALS D-alanine transporter; D-alanine binding, periplasmic, transport protein; 1.90A {Salmonella enterica} PDB: 3r39_A 4f3s_A
Probab=20.34 E-value=1.2e+02 Score=23.03 Aligned_cols=35 Identities=9% Similarity=0.074 Sum_probs=30.6
Q ss_pred CCCcccchHHHHHHHHHHcCCcEEEEecCHHHHhh
Q 028343 114 GTILPGITRKSIIEITHVLGYQVKERAIPVEELFD 148 (210)
Q Consensus 114 ~~~L~GitR~~vl~~a~~~gi~v~e~~i~~~el~~ 148 (210)
.|-+.|+.-+.+-++++++|++++....+.+++..
T Consensus 48 ~g~~~G~~~dl~~~i~~~~g~~~~~~~~~~~~~~~ 82 (259)
T 4dz1_A 48 DGKLQGIDLELFSSYCQSRHCKLNITEYAWDGMLG 82 (259)
T ss_dssp TCCEESHHHHHHHHHHHHHTCEEEEEECCHHHHHH
T ss_pred CCCEEEeHHHHHHHHHHHhCCeEEEEEcCHHHHHH
Confidence 67788999999999999999999999988877654
No 52
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=20.24 E-value=95 Score=21.28 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=29.0
Q ss_pred ccchHHHHHHHHH---HcCCcEEEEecC---HHHHhhhhhhhhccccc
Q 028343 118 PGITRKSIIEITH---VLGYQVKERAIP---VEELFDAEEVFCTGTAV 159 (210)
Q Consensus 118 ~GitR~~vl~~a~---~~gi~v~e~~i~---~~el~~ade~f~tns~~ 159 (210)
.|-|++..-.+++ +.|++++.-++. .+++.++|.+++..+..
T Consensus 10 tGnT~~~a~~i~~~l~~~g~~v~~~~~~~~~~~~l~~~d~vi~g~p~y 57 (137)
T 2fz5_A 10 TGNTEAMANEIEAAVKAAGADVESVRFEDTNVDDVASKDVILLGCPAM 57 (137)
T ss_dssp SSHHHHHHHHHHHHHHHTTCCEEEEETTSCCHHHHHTCSEEEEECCCB
T ss_pred CChHHHHHHHHHHHHHhCCCeEEEEEcccCCHHHHhcCCEEEEEcccc
Confidence 4888877665554 457777766654 67788888877766653
Done!