BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028346
(210 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255634132|gb|ACU17429.1| unknown [Glycine max]
Length = 189
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 138/181 (76%), Positives = 153/181 (84%)
Query: 4 KEEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVE 63
+E+E V+VTPGEVLG+ ++VKAG+GAY A HN VYASLTG T+ P PDS D RPTVE
Sbjct: 3 EEKEAVMVTPGEVLGRTSDVKAGRGAYAALHNNTVYASLTGFRHTVPPAPDSSDLRPTVE 62
Query: 64 VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
VTGHKAHGPVP+PGSVVIARVTKVM R ASADIMCVG KSVREKF+GIIRQQDVRATEID
Sbjct: 63 VTGHKAHGPVPQPGSVVIARVTKVMARSASADIMCVGPKSVREKFTGIIRQQDVRATEID 122
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLNII 183
KVDMHLSF PGDIVRA VLSLGDARAYFLSTAKN+LGVVSAES AG + +S ++
Sbjct: 123 KVDMHLSFHPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESIAGATMVPVSWTEMQCP 182
Query: 184 L 184
L
Sbjct: 183 L 183
>gi|224125764|ref|XP_002319669.1| predicted protein [Populus trichocarpa]
gi|118483759|gb|ABK93772.1| unknown [Populus trichocarpa]
gi|222858045|gb|EEE95592.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/184 (76%), Positives = 155/184 (84%), Gaps = 4/184 (2%)
Query: 5 EEEMVLVTPGEVLGKATEVKAGKGAYVAKHNG----LVYASLTGLLRTLSPPPDSPDQRP 60
+EE + TPGEVLGKATE+KAGKGAY+ + V++SLTGL RTLSP PDSPDQRP
Sbjct: 2 QEEGEMATPGEVLGKATELKAGKGAYIGSYRDTDIQYVFSSLTGLRRTLSPSPDSPDQRP 61
Query: 61 TVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRAT 120
TVEVTGHKAHG VPEPGSVVIARVTKVM + ASADIMCVG KSV+EKF+GIIRQQDVRAT
Sbjct: 62 TVEVTGHKAHGAVPEPGSVVIARVTKVMAKTASADIMCVGPKSVQEKFTGIIRQQDVRAT 121
Query: 121 EIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDL 180
EIDKVDMHLSFRPGDIVRA VLSLGDARAY+LSTAKN+LGVVSAES AG + IS ++
Sbjct: 122 EIDKVDMHLSFRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAESAAGATMVPISWTEM 181
Query: 181 NIIL 184
L
Sbjct: 182 QCPL 185
>gi|363814479|ref|NP_001242874.1| uncharacterized protein LOC100796154 [Glycine max]
gi|255640712|gb|ACU20640.1| unknown [Glycine max]
Length = 197
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 137/181 (75%), Positives = 152/181 (83%)
Query: 4 KEEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVE 63
+E+E V+VTPGEVLG+ ++VKAG+GAY A HN VYASLTG T+ P PDS D RPTVE
Sbjct: 3 EEKEAVMVTPGEVLGRTSDVKAGRGAYAALHNNTVYASLTGFRHTVPPAPDSSDLRPTVE 62
Query: 64 VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
VTGHKAHGPVP+PGSVVIARVTKVM R ASADIMCVG KSVR KF+GIIRQQDVRATEID
Sbjct: 63 VTGHKAHGPVPQPGSVVIARVTKVMARSASADIMCVGPKSVRGKFTGIIRQQDVRATEID 122
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLNII 183
KVDMHLSF PGDIVRA VLSLGDARAYFLSTAKN+LGVVSAES AG + +S ++
Sbjct: 123 KVDMHLSFHPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESIAGATMVPVSWTEMQCP 182
Query: 184 L 184
L
Sbjct: 183 L 183
>gi|357441291|ref|XP_003590923.1| Ammonium transporter [Medicago truncatula]
gi|355479971|gb|AES61174.1| Ammonium transporter [Medicago truncatula]
Length = 1109
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/180 (73%), Positives = 150/180 (83%)
Query: 5 EEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV 64
E E +VTPGEV+GK +VKAG+G Y + HN VYASLTG T+ P DSPDQRP VEV
Sbjct: 2 EAERDMVTPGEVIGKTHDVKAGRGTYTSTHNNTVYASLTGFRHTIPPASDSPDQRPIVEV 61
Query: 65 TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDK 124
TGHKAHGPVPEPGSVVI RVTKVMT++A ADIMCVG KSVREKF+G+IRQQDVRATEIDK
Sbjct: 62 TGHKAHGPVPEPGSVVIVRVTKVMTKIAEADIMCVGQKSVREKFTGVIRQQDVRATEIDK 121
Query: 125 VDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLNIIL 184
VDMHLSFRPGDIV+A VLSLG+ARAYFL+TAKN+LGVVSAESTAG + IS ++ L
Sbjct: 122 VDMHLSFRPGDIVKALVLSLGNARAYFLTTAKNELGVVSAESTAGATLVPISWTEMQCPL 181
>gi|255562013|ref|XP_002522015.1| conserved hypothetical protein [Ricinus communis]
gi|223538819|gb|EEF40419.1| conserved hypothetical protein [Ricinus communis]
Length = 593
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 142/188 (75%), Positives = 158/188 (84%), Gaps = 6/188 (3%)
Query: 1 MVVKEEEMVLVTPGEVLGKATEVKAGKGAYVAKHNG----LVYASLTGLLRTLSPPPDSP 56
M ++EEMV TPGEVLGKA+E+KAGKGAYVA + VY+SL+G LRTL+P PDSP
Sbjct: 394 MEGEKEEMV--TPGEVLGKASELKAGKGAYVAPYRNTDIFYVYSSLSGFLRTLAPTPDSP 451
Query: 57 DQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQD 116
DQRPTVEVTG KA G VPE GSVVIARVTKVM +MASADIMCVG KSVREKF+G+IRQQD
Sbjct: 452 DQRPTVEVTGLKARGAVPEAGSVVIARVTKVMAKMASADIMCVGPKSVREKFTGLIRQQD 511
Query: 117 VRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
VRATEIDKVDMHLSFRPGDIVRA VLSLGDARAY+LSTAKN+LGVVSAESTAG + IS
Sbjct: 512 VRATEIDKVDMHLSFRPGDIVRAVVLSLGDARAYYLSTAKNELGVVSAESTAGGTMVPIS 571
Query: 177 KYDLNIIL 184
++ L
Sbjct: 572 WTEMQCPL 579
>gi|225430615|ref|XP_002266663.1| PREDICTED: exosome complex component CSL4 [Vitis vinifera]
gi|296085148|emb|CBI28643.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 135/184 (73%), Positives = 149/184 (80%)
Query: 1 MVVKEEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRP 60
M +EE LVTPGEVLGK +++KAG+GAY NG VYASLTG + P P S DQRP
Sbjct: 1 MQEREEAEELVTPGEVLGKGSQLKAGRGAYFLPQNGTVYASLTGRRSLIPPSPLSSDQRP 60
Query: 61 TVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRAT 120
TVEVTGH AHG +PEPGS+VIARVTKVM RMASADIMCVG KSVREKF+GIIRQQDVRAT
Sbjct: 61 TVEVTGHSAHGAIPEPGSIVIARVTKVMARMASADIMCVGPKSVREKFTGIIRQQDVRAT 120
Query: 121 EIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDL 180
EIDKVDMH SFRPGDIVRA VLSLGDARAYFLSTAKN+LGVVSAES AG + +S ++
Sbjct: 121 EIDKVDMHSSFRPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESAAGATMVPMSWTEM 180
Query: 181 NIIL 184
L
Sbjct: 181 QCPL 184
>gi|297805862|ref|XP_002870815.1| hypothetical protein ARALYDRAFT_494089 [Arabidopsis lyrata subsp.
lyrata]
gi|297316651|gb|EFH47074.1| hypothetical protein ARALYDRAFT_494089 [Arabidopsis lyrata subsp.
lyrata]
Length = 191
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 147/175 (84%), Gaps = 2/175 (1%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
LVTPG+V+GKATE KAGKGAYV ++ +YASLTG R +SP P+S DQR VEVTGHKA
Sbjct: 5 LVTPGDVIGKATEFKAGKGAYV--NDTTIYASLTGTRRIVSPLPESLDQRAVVEVTGHKA 62
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
HGP+PEPGSVVIARVTKVM RMA+ DI+CVG+K+VRE F+G+IRQQDVRATEIDKVDMH
Sbjct: 63 HGPIPEPGSVVIARVTKVMARMAAVDILCVGSKAVRENFAGVIRQQDVRATEIDKVDMHQ 122
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLNIIL 184
SFR GDIVRA VLSLGDARAY+LSTAKN+LGVVSAES G+ + IS ++ L
Sbjct: 123 SFRAGDIVRAMVLSLGDARAYYLSTAKNELGVVSAESAEGETMVPISWTEMQCPL 177
>gi|42568189|ref|NP_568559.2| exosome complex component CSL4 [Arabidopsis thaliana]
gi|124301132|gb|ABN04818.1| At5g38890 [Arabidopsis thaliana]
gi|222423301|dbj|BAH19626.1| AT5G38890 [Arabidopsis thaliana]
gi|332006986|gb|AED94369.1| exosome complex component CSL4 [Arabidopsis thaliana]
Length = 191
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 147/175 (84%), Gaps = 2/175 (1%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
LVTPG+V+GKATE KAGKGAYV ++ +YASLTG R +SP P+S DQR VEVTGHKA
Sbjct: 5 LVTPGDVIGKATEFKAGKGAYV--NDATIYASLTGTCRIVSPLPESIDQRAIVEVTGHKA 62
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
HGP+PE GSVVIARVTKVMT+MA+ DI+CVG+K+VRE F+G+IRQQDVRATEIDKVDMH
Sbjct: 63 HGPIPETGSVVIARVTKVMTKMAAVDILCVGSKAVRENFAGVIRQQDVRATEIDKVDMHQ 122
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLNIIL 184
SF GDIVRA VLSLGDARAY+LSTAKN+LGVVSAES AG+ + IS ++ L
Sbjct: 123 SFHAGDIVRAMVLSLGDARAYYLSTAKNELGVVSAESAAGETMVPISWTEMQCPL 177
>gi|449453260|ref|XP_004144376.1| PREDICTED: exosome complex component CSL4-like [Cucumis sativus]
gi|449515303|ref|XP_004164689.1| PREDICTED: exosome complex component CSL4-like [Cucumis sativus]
Length = 196
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 127/177 (71%), Positives = 144/177 (81%), Gaps = 2/177 (1%)
Query: 5 EEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV 64
E++ VTPGEVLG ++ K G+GAYV + VYASL+G R + PP DS D R TVEV
Sbjct: 5 EKDTEFVTPGEVLGNFSDFKPGRGAYVT--DNTVYASLSGFRRIIHPPSDSSDLRSTVEV 62
Query: 65 TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDK 124
TGHKAHG VP PGS+VI RVTKVMT+MASADIMCVG KSV+EKF+GIIRQQDVRATEIDK
Sbjct: 63 TGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEIDK 122
Query: 125 VDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
VDMHLSFRPGDIV+A VLSLGDARAY LSTAKN+LGVVSAESTAG + IS ++
Sbjct: 123 VDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQ 179
>gi|226531832|ref|NP_001148354.1| 3-5 exoribonuclease CSL4 [Zea mays]
gi|195618352|gb|ACG31006.1| 3-5 exoribonuclease CSL4 [Zea mays]
gi|223975657|gb|ACN32016.1| unknown [Zea mays]
gi|413939469|gb|AFW74020.1| 3-5 exoribonuclease CSL4 [Zea mays]
Length = 199
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 140/175 (80%), Gaps = 2/175 (1%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+VTPGE+LG + + AG+GAY + V AS+TG R + P P S DQR TVEV GHKA
Sbjct: 14 VVTPGELLGNSLTLAAGRGAYADGRS--VRASVTGRRRIVPPAPGSDDQRSTVEVVGHKA 71
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
HG VP+PGSVVIARVTKVM RMASADIMCV +K++REKF+G+IRQQDVRATEIDKVDM+
Sbjct: 72 HGAVPQPGSVVIARVTKVMARMASADIMCVDSKAIREKFTGMIRQQDVRATEIDKVDMYQ 131
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLNIIL 184
S+RPGDIV+A VLSLGDARAY+LSTAKN+LGVVSA+S AG + IS ++ L
Sbjct: 132 SYRPGDIVKAMVLSLGDARAYYLSTAKNELGVVSAQSIAGGTLVPISWTEMQCDL 186
>gi|357159969|ref|XP_003578616.1| PREDICTED: exosome complex component CSL4-like [Brachypodium
distachyon]
Length = 199
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 141/175 (80%), Gaps = 2/175 (1%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+VTPGE+LG ++ AG GAY + V AS+TG R + P PDSPD+R TVEV GHKA
Sbjct: 14 VVTPGELLGTSSSFVAGHGAYADGRS--VRASVTGHRRIVPPSPDSPDKRSTVEVVGHKA 71
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
HG VP+PGSVVIARVTKVM R+ASADIMCV +K+V+EKF+G+IRQQDVRATEIDKVDM+
Sbjct: 72 HGAVPQPGSVVIARVTKVMARVASADIMCVDSKAVKEKFTGMIRQQDVRATEIDKVDMYQ 131
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLNIIL 184
S+RPGDIVRA VLSLGDARAY+LSTAKN+LGVVSA+S AG ++ S ++ L
Sbjct: 132 SYRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAQSIAGGMLVPTSWTEMQCEL 186
>gi|326522694|dbj|BAJ88393.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 200
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/161 (71%), Positives = 136/161 (84%), Gaps = 2/161 (1%)
Query: 9 VLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHK 68
V+VTPGE+LG ++ + AG+GAY + V AS+TG R + P P S DQR TVEV GHK
Sbjct: 14 VVVTPGELLGPSSYLAAGRGAYAEGRS--VRASVTGRRRFVPPAPGSSDQRSTVEVVGHK 71
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMH 128
AHG VP+PGS+VIARVTKVM RMASADIMCV +K+V+EKF+G+IRQQDVRATEIDKVDM+
Sbjct: 72 AHGAVPQPGSIVIARVTKVMARMASADIMCVDSKAVKEKFTGMIRQQDVRATEIDKVDMY 131
Query: 129 LSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
S+RPGDIVRA VLSLGDARAY+LSTAKN+LGVVSA+S AG
Sbjct: 132 QSYRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAQSIAG 172
>gi|115449601|ref|NP_001048506.1| Os02g0815800 [Oryza sativa Japonica Group]
gi|113538037|dbj|BAF10420.1| Os02g0815800 [Oryza sativa Japonica Group]
Length = 197
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 138/175 (78%), Gaps = 3/175 (1%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+VTPGE+LG ++ + AG GAY V AS+TG R + PPP S DQR TVEV GHKA
Sbjct: 13 VVTPGELLGNSS-LLAGLGAYADGR--CVRASITGHRRLVPPPPGSTDQRSTVEVVGHKA 69
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
HG VP+PGSVVIARVTKVM RMASADIMCV +K+V+EKF+G+IRQQDVRATEIDKVDM
Sbjct: 70 HGAVPQPGSVVIARVTKVMARMASADIMCVDSKAVKEKFTGMIRQQDVRATEIDKVDMFQ 129
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLNIIL 184
S+RPGDIVRA VLSLGDARAY+LSTA+N+LGVVSA+S G + IS ++ L
Sbjct: 130 SYRPGDIVRALVLSLGDARAYYLSTAQNELGVVSAQSITGGTLVPISWTEMQCEL 184
>gi|47848174|dbj|BAD22001.1| exoribonuclease-like [Oryza sativa Japonica Group]
gi|218191808|gb|EEC74235.1| hypothetical protein OsI_09429 [Oryza sativa Indica Group]
gi|222623907|gb|EEE58039.1| hypothetical protein OsJ_08863 [Oryza sativa Japonica Group]
Length = 192
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 138/175 (78%), Gaps = 3/175 (1%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+VTPGE+LG ++ + AG GAY V AS+TG R + PPP S DQR TVEV GHKA
Sbjct: 8 VVTPGELLGNSS-LLAGLGAYADGR--CVRASITGHRRLVPPPPGSTDQRSTVEVVGHKA 64
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
HG VP+PGSVVIARVTKVM RMASADIMCV +K+V+EKF+G+IRQQDVRATEIDKVDM
Sbjct: 65 HGAVPQPGSVVIARVTKVMARMASADIMCVDSKAVKEKFTGMIRQQDVRATEIDKVDMFQ 124
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLNIIL 184
S+RPGDIVRA VLSLGDARAY+LSTA+N+LGVVSA+S G + IS ++ L
Sbjct: 125 SYRPGDIVRALVLSLGDARAYYLSTAQNELGVVSAQSITGGTLVPISWTEMQCEL 179
>gi|294460089|gb|ADE75627.1| unknown [Picea sitchensis]
Length = 193
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 132/174 (75%)
Query: 11 VTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAH 70
+TPGE++GK+ + AG G Y+ N +YA GL R + P++ D RPTVEV K H
Sbjct: 7 MTPGEIVGKSYDYIAGPGTYLNPSNNTIYACAVGLKRLIPASPNAGDNRPTVEVVKEKEH 66
Query: 71 GPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLS 130
G VPEPG++V ARVTKVM R+AS +I+CVG ++V+EKF+G +RQQDVRATEIDKVDM+ S
Sbjct: 67 GAVPEPGAIVTARVTKVMVRLASVNIICVGMRAVKEKFTGTVRQQDVRATEIDKVDMYTS 126
Query: 131 FRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLNIIL 184
FRPGDI+RA VLSLGDARAY+LSTAKN+LGVVSAES AG + IS ++ L
Sbjct: 127 FRPGDIIRAEVLSLGDARAYYLSTAKNELGVVSAESIAGATMIPISWTEMQCPL 180
>gi|356574865|ref|XP_003555564.1| PREDICTED: LOW QUALITY PROTEIN: exosome complex component CSL4-like
[Glycine max]
Length = 167
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/181 (62%), Positives = 131/181 (72%), Gaps = 30/181 (16%)
Query: 4 KEEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVE 63
+E+E V++TPGEVLG+ +++K G + R TVE
Sbjct: 3 EEKETVMLTPGEVLGRTSDIKDG------------------------------NTRLTVE 32
Query: 64 VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
VTGHK+HGPVP+PGSVVIARVTKVM R ASADIMCVG KSVREKF+GIIRQQDVRATEID
Sbjct: 33 VTGHKSHGPVPQPGSVVIARVTKVMARSASADIMCVGPKSVREKFTGIIRQQDVRATEID 92
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLNII 183
KVDMHLSF PGDIVRA VLSLGDARAYFLSTAKN+LGVVSAES AG + +S ++
Sbjct: 93 KVDMHLSFHPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESIAGATMXPVSWTEMQCP 152
Query: 184 L 184
L
Sbjct: 153 L 153
>gi|302790375|ref|XP_002976955.1| hypothetical protein SELMODRAFT_175887 [Selaginella moellendorffii]
gi|300155433|gb|EFJ22065.1| hypothetical protein SELMODRAFT_175887 [Selaginella moellendorffii]
Length = 197
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/184 (56%), Positives = 134/184 (72%), Gaps = 4/184 (2%)
Query: 1 MVVKEEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRP 60
M +E++ L TPGE+LG A+E AG+G+Y H+G +YASL G+ + S D RP
Sbjct: 1 MAKREDD--LRTPGELLGLASEFNAGRGSYC--HDGKIYASLVGIRHLIEAKQGSDDLRP 56
Query: 61 TVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRAT 120
T+E+ K VPE GS V A++TKV RMASADI+CVG ++V+EKF+GI+RQQDVR T
Sbjct: 57 TIEIRREKERDAVPEAGSTVTAKITKVQARMASADIVCVGPRAVKEKFTGIVRQQDVRLT 116
Query: 121 EIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDL 180
EIDKVDMH SFRPGDI+RA V+SLGD+RAY+LSTAKN+LGVVSA S AG + +S ++
Sbjct: 117 EIDKVDMHSSFRPGDIIRAEVISLGDSRAYYLSTAKNELGVVSAVSVAGATMVAVSWQEM 176
Query: 181 NIIL 184
L
Sbjct: 177 QCPL 180
>gi|168050507|ref|XP_001777700.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670920|gb|EDQ57480.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 192
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 124/173 (71%), Gaps = 2/173 (1%)
Query: 9 VLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHK 68
V TPGEVLG G G Y G V +S+ GL R + P PD+PDQRP +EV+ K
Sbjct: 6 VFSTPGEVLGSLAVYAPGPGTYA--WGGNVVSSVVGLQRVVPPSPDAPDQRPIIEVSREK 63
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMH 128
G VP PG+ V A++ KV R A ADI+CVG ++V+EKF G++RQQDVRATEIDKVDMH
Sbjct: 64 EQGAVPGPGAQVTAKIRKVQPRQAIADILCVGTRAVKEKFRGLVRQQDVRATEIDKVDMH 123
Query: 129 LSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
LSFRPGDI+RA VLSLGDARAYFLSTAKN+LGVVSA S AG + IS ++
Sbjct: 124 LSFRPGDIIRAEVLSLGDARAYFLSTAKNELGVVSATSDAGAQMVPISWQEMQ 176
>gi|9758066|dbj|BAB08645.1| unnamed protein product [Arabidopsis thaliana]
Length = 145
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 116/135 (85%), Gaps = 2/135 (1%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
LVTPG+V+GKATE KAGKGAYV ++ +YASLTG R +SP P+S DQR VEVTGHKA
Sbjct: 5 LVTPGDVIGKATEFKAGKGAYV--NDATIYASLTGTCRIVSPLPESIDQRAIVEVTGHKA 62
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
HGP+PE GSVVIARVTKVMT+MA+ DI+CVG+K+VRE F+G+IRQQDVRATEIDKVDMH
Sbjct: 63 HGPIPETGSVVIARVTKVMTKMAAVDILCVGSKAVRENFAGVIRQQDVRATEIDKVDMHQ 122
Query: 130 SFRPGDIVRASVLSL 144
SF GDIVRA V+SL
Sbjct: 123 SFHAGDIVRAMVVSL 137
>gi|302797873|ref|XP_002980697.1| hypothetical protein SELMODRAFT_178307 [Selaginella moellendorffii]
gi|300151703|gb|EFJ18348.1| hypothetical protein SELMODRAFT_178307 [Selaginella moellendorffii]
Length = 205
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 128/169 (75%), Gaps = 4/169 (2%)
Query: 1 MVVKEEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRP 60
M +E++ L TPGE+LG A+E AG+G+Y H+G +YASL G+ + S D RP
Sbjct: 1 MAKREDD--LRTPGELLGLASEFNAGRGSYC--HDGKIYASLVGIRHLIEAKQGSDDLRP 56
Query: 61 TVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRAT 120
T+E+ K VPE GS V A++TKV RMASADI+CVG ++V+EKF+GI+RQQDVR T
Sbjct: 57 TIEIRREKERDAVPEAGSTVTAKITKVQARMASADIVCVGPRAVKEKFTGIVRQQDVRLT 116
Query: 121 EIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
EIDKVDMH SFRPGDI+RA V+SLGD+RAY+LSTAKN+LGVVSA S AG
Sbjct: 117 EIDKVDMHSSFRPGDIIRAEVISLGDSRAYYLSTAKNELGVVSAVSVAG 165
>gi|224030371|gb|ACN34261.1| unknown [Zea mays]
gi|413939467|gb|AFW74018.1| hypothetical protein ZEAMMB73_791647 [Zea mays]
gi|413939468|gb|AFW74019.1| hypothetical protein ZEAMMB73_791647 [Zea mays]
Length = 188
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 123/171 (71%), Gaps = 8/171 (4%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+VTPGE+LG + + AG+GAY + V AS+TG R + P P S DQR TVEV GHKA
Sbjct: 14 VVTPGELLGNSLTLAAGRGAYADGRS--VRASVTGRRRIVPPAPGSDDQRSTVEVVGHKA 71
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
HG VP+PGSVVIARVTKVM RMASADIMCV +K++REKF+G+IRQQDVRATEIDKVDM+
Sbjct: 72 HGAVPQPGSVVIARVTKVMARMASADIMCVDSKAIREKFTGMIRQQDVRATEIDKVDMYQ 131
Query: 130 SFRPGDIVRASVLSLGDAR------AYFLSTAKNDLGVVSAESTAGKLVYC 174
S+RPGDIV+A V+SL D + F S + LG+++ + + C
Sbjct: 132 SYRPGDIVKAMVVSLIDENDAVQIISVFFSCYQPWLGLLALRLSTSTFLSC 182
>gi|242066968|ref|XP_002454773.1| hypothetical protein SORBIDRAFT_04g037080 [Sorghum bicolor]
gi|241934604|gb|EES07749.1| hypothetical protein SORBIDRAFT_04g037080 [Sorghum bicolor]
Length = 155
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/135 (67%), Positives = 110/135 (81%), Gaps = 2/135 (1%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+VTPGE+LG + + AG+GAY + V AS+TG R + P P S DQR TVEV GHKA
Sbjct: 15 VVTPGELLGNSLTLAAGRGAYADGRS--VRASVTGRRRIVPPAPGSDDQRSTVEVVGHKA 72
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
HG VP+PGSVVIARVTKVM RMASADIMCV +K+++EKF+G+IRQQDVRATEIDKVDM+
Sbjct: 73 HGAVPQPGSVVIARVTKVMARMASADIMCVDSKAIKEKFTGMIRQQDVRATEIDKVDMYQ 132
Query: 130 SFRPGDIVRASVLSL 144
S+RPGDIV+A V+SL
Sbjct: 133 SYRPGDIVKAMVVSL 147
>gi|224105431|ref|XP_002333818.1| predicted protein [Populus trichocarpa]
gi|222838632|gb|EEE76997.1| predicted protein [Populus trichocarpa]
Length = 119
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/115 (73%), Positives = 96/115 (83%), Gaps = 4/115 (3%)
Query: 5 EEEMVLVTPGEVLGKATEVKAGKGAYVAKHNG----LVYASLTGLLRTLSPPPDSPDQRP 60
+EE + TPGEVLGKATE+KAGKGAY+ + V++SLTGL RTLSP PDSPDQRP
Sbjct: 2 QEEGEMATPGEVLGKATELKAGKGAYIGSYRDTDIQYVFSSLTGLRRTLSPSPDSPDQRP 61
Query: 61 TVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQ 115
TVEVTGHKAHG VPEPGSVVIARVTKVM + ASADIMCVG KSV+EKF+GI+ QQ
Sbjct: 62 TVEVTGHKAHGAVPEPGSVVIARVTKVMAKTASADIMCVGPKSVQEKFTGIMVQQ 116
>gi|384251760|gb|EIE25237.1| hypothetical protein COCSUDRAFT_52805 [Coccomyxa subellipsoidea
C-169]
Length = 190
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 114/161 (70%), Gaps = 2/161 (1%)
Query: 9 VLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHK 68
++V PGE L KA E A G YV + + ASL G+ ++ + + D+RP VEV
Sbjct: 4 LVVCPGERLFKAAEYVASSGTYVKGDH--ICASLVGIPQSFAGSSSAEDKRPVVEVLRSG 61
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMH 128
+ VPE G++VIA+V KV R+ASA ++CV + + + FSGIIRQQDVRATEIDKV+M+
Sbjct: 62 SRAKVPETGNIVIAKVNKVNPRLASASLLCVNTQPLTDSFSGIIRQQDVRATEIDKVEMY 121
Query: 129 LSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
FRPGD+VRA V+SLGD+R+Y+LSTAKNDLGVV A+S G
Sbjct: 122 SCFRPGDLVRAEVISLGDSRSYYLSTAKNDLGVVYAKSLNG 162
>gi|297819770|ref|XP_002877768.1| hypothetical protein ARALYDRAFT_485422 [Arabidopsis lyrata subsp.
lyrata]
gi|297323606|gb|EFH54027.1| hypothetical protein ARALYDRAFT_485422 [Arabidopsis lyrata subsp.
lyrata]
Length = 203
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/145 (62%), Positives = 103/145 (71%), Gaps = 9/145 (6%)
Query: 24 KAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIAR 83
+ GKGAYV + +Y SLTG R +SP P+S DQR VEVTGHKAHGP+PE GSVVIAR
Sbjct: 7 RKGKGAYV--NVITIYGSLTGTRRIVSPLPESLDQRAIVEVTGHKAHGPIPETGSVVIAR 64
Query: 84 VTKVMTRMASADIMCVGAKSVREKFSG--IIRQQDVRATEIDKVDMHLSFRPGDIVRASV 141
VTKVM RMA+ DI+C+G K+V I + ATEIDKVDMH SF GDI
Sbjct: 65 VTKVMARMAAVDILCIGPKAVFADLISLFIFMCRSKLATEIDKVDMHQSFNAGDI----- 119
Query: 142 LSLGDARAYFLSTAKNDLGVVSAES 166
LSLGDA+A +LST KNDLGVVSAES
Sbjct: 120 LSLGDAQADYLSTVKNDLGVVSAES 144
>gi|307110096|gb|EFN58333.1| hypothetical protein CHLNCDRAFT_30168 [Chlorella variabilis]
Length = 192
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/175 (50%), Positives = 111/175 (63%), Gaps = 2/175 (1%)
Query: 7 EMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTG 66
E +LVTPGE L E AG G V + + A+L G R L +QRP VEV
Sbjct: 3 ETLLVTPGERLALVAEYDAGSGTCV--KDKFICATLVGSKRVLPAGEGEAEQRPRVEVVR 60
Query: 67 HKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
VP G V ARV ++ R+A+ DI+CVG K VR+++SG+IR QDVRATEIDKV
Sbjct: 61 SGVEPVVPRVGDTVTARVVRINPRLAAVDILCVGPKPVRQRYSGVIRVQDVRATEIDKVQ 120
Query: 127 MHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
+ SFRPGD+VRA VLSLGDAR+Y L+TAKN LGVV A+S AG + IS ++
Sbjct: 121 VQASFRPGDVVRAEVLSLGDARSYHLTTAKNQLGVVYAKSVAGVPMVPISWQEMQ 175
>gi|328770331|gb|EGF80373.1| hypothetical protein BATDEDRAFT_88821 [Batrachochytrium
dendrobatidis JAM81]
Length = 189
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 115/174 (66%), Gaps = 4/174 (2%)
Query: 8 MVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGH 67
M V PG+ LG A + A G Y+ +G VYAS+ G + ++P D + +P++ V
Sbjct: 1 MTTVLPGQRLGLAADTNASTGTYI--KDGFVYASVMGN-KHITPSIDPLNTKPSLSVFKD 57
Query: 68 K-AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K A+ VPE GS++I +VT++ R AS +IM + + E F GIIR QDVRATE DKV
Sbjct: 58 KQANSGVPEIGSLIIGKVTRINPRFASVNIMVISSTPCSEVFQGIIRVQDVRATEKDKVQ 117
Query: 127 MHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDL 180
++ SFRPGDIVRA VLSLGDAR+Y LSTA+N+LGVV A+S AG + IS ++
Sbjct: 118 IYRSFRPGDIVRAKVLSLGDARSYHLSTAQNELGVVFAQSLAGCTMVPISWEEM 171
>gi|328875935|gb|EGG24299.1| 3'-5' exoribonuclease [Dictyostelium fasciculatum]
Length = 246
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 115/187 (61%), Gaps = 29/187 (15%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSP------------------ 51
+VTPG+ L K TE + +G YV H G +Y+S+ G T+
Sbjct: 4 IVTPGQKLCKDTEYISSEGTYV--HKGSIYSSVLGFSHTIKRNINTDNNNETTTTSSSGS 61
Query: 52 ----PPD-----SPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAK 102
P + S D+R + V K G VPE G+VV +V ++ R+AS I+CVG K
Sbjct: 62 SSSIPSEYNNSTSEDKRDYIVVLKEKEPGIVPEIGNVVTVQVLRINPRLASCAILCVGTK 121
Query: 103 SVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVV 162
+++E F+G+IR QDVRATEIDKV+++ SFRPGDIV A V+SLGD+R+Y+LSTAKN+LGVV
Sbjct: 122 ALKETFNGVIRVQDVRATEIDKVEIYKSFRPGDIVSAEVISLGDSRSYYLSTAKNELGVV 181
Query: 163 SAESTAG 169
A+S G
Sbjct: 182 FAQSVVG 188
>gi|281211015|gb|EFA85181.1| 3'-5' exoribonuclease [Polysphondylium pallidum PN500]
Length = 238
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 117/190 (61%), Gaps = 20/190 (10%)
Query: 5 EEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLL----RTLSPPPDSPD--- 57
+ + +VTPG+ L + E A +G Y K G +Y+S+ G ++ +S D
Sbjct: 2 DNNITIVTPGQKLSRDNEYIASEGTYYYK--GSIYSSVLGFRHFVKNNITSKEESDDIVD 59
Query: 58 -----------QRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE 106
+ + V K G VPE GSVV +V ++ R+AS I+CVG K+++E
Sbjct: 60 NSNINNNNNNSNKDYIVVLKEKDPGVVPEIGSVVTVQVLRINPRLASVAILCVGTKALKE 119
Query: 107 KFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAES 166
F+GIIR QDVRATEIDKV+++ SFRPGDIV A V+SLGD+R+YFLSTAKN+LGVV A+S
Sbjct: 120 TFNGIIRVQDVRATEIDKVEIYKSFRPGDIVIAEVISLGDSRSYFLSTAKNELGVVFAQS 179
Query: 167 TAGKLVYCIS 176
AG + IS
Sbjct: 180 VAGATMIPIS 189
>gi|159485846|ref|XP_001700955.1| hypothetical protein CHLREDRAFT_187429 [Chlamydomonas reinhardtii]
gi|158281454|gb|EDP07209.1| predicted protein [Chlamydomonas reinhardtii]
Length = 198
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 106/157 (67%), Gaps = 5/157 (3%)
Query: 14 GEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPV 73
G+ LG AG+G +V +G V AS+ G R L P D P ++PT+ V V
Sbjct: 13 GDRLGTTDTYAAGEGVFV--RDGFVIASVVGFQR-LEPSAD-PGEKPTIHVASGDTRPLV 68
Query: 74 PEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRP 133
P+PG +V ++++V A A IMCVG +++ +F G+IRQQDVR+TEID+V ++ FRP
Sbjct: 69 PKPGDIVTVKISRVAQTAAHALIMCVGRQALGTEFKGVIRQQDVRSTEIDRVVIYDCFRP 128
Query: 134 GDIVRASVLSLGDARAYFLSTAKNDLGVVSAES-TAG 169
GDIVRA V+SLGDAR+Y+LSTAKN+LGVV A S TAG
Sbjct: 129 GDIVRAEVVSLGDARSYYLSTAKNELGVVYARSATAG 165
>gi|375332113|gb|AFA52596.1| hypothetical protein [Vaucheria litorea]
Length = 191
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 108/167 (64%), Gaps = 7/167 (4%)
Query: 11 VTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAH 70
V PG+ +G+ E +G G YV + +Y+SL G ++ + + P+ P + V G KA
Sbjct: 5 VCPGDRIGRCDEYTSGNGTYVRGPH--IYSSLVGRIQKI----EVPENLPVLTVKGKKAV 58
Query: 71 -GPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
G + E G VV+ RVT+V +AS DI+C G +RE GIIR++DVR+TE+DKVDM
Sbjct: 59 VGQILEVGVVVMGRVTRVKNNLASVDILCAGKFVLREICQGIIRKEDVRSTEVDKVDMWK 118
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
FRPGDIVR V+SLG++R YFLST+ DLGV A S AG+++ IS
Sbjct: 119 CFRPGDIVRTKVISLGNSRDYFLSTSGEDLGVSWARSEAGEVLVPIS 165
>gi|291227929|ref|XP_002733935.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 204
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 100/156 (64%), Gaps = 6/156 (3%)
Query: 14 GEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPV 73
G+ LG+ +G G YV + +Y+SL G + ++ D+ P + VT + H +
Sbjct: 20 GDRLGRCEHYASGNGTYVRQQ--CIYSSLAGFVHE----QENDDKLPILNVTREEQHTVI 73
Query: 74 PEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRP 133
PE GS+V A+VT + R I+CV +++KF G+IR+ DVRATE D+++M+ FRP
Sbjct: 74 PEVGSIVTAKVTNINPRFCKCTILCVEDSPLKDKFRGMIRKDDVRATEKDRIEMYKCFRP 133
Query: 134 GDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
GDI+ A VLSLGDA++Y L+TA+N+ GVV AES AG
Sbjct: 134 GDIILAKVLSLGDAQSYLLTTAENEFGVVLAESEAG 169
>gi|384501277|gb|EIE91768.1| hypothetical protein RO3G_16479 [Rhizopus delemar RA 99-880]
Length = 189
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 100/159 (62%), Gaps = 5/159 (3%)
Query: 11 VTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAH 70
VTPG+ LG A + G G Y + +GL+YAS+ G +Q PT+ V+ K
Sbjct: 8 VTPGQRLGYAADYIQGPGTY--ERDGLLYASVVGHKYIDQ---SKNEQLPTIRVSKEKEQ 62
Query: 71 GPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLS 130
VPE GSV+ +V +V A+ IM VG +E F G+IR QDVRA E DKV ++ S
Sbjct: 63 SAVPEVGSVITGKVIRVAPHQATIAIMVVGETPCKEDFMGVIRTQDVRAAEKDKVKIYNS 122
Query: 131 FRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
FRPGDIV+A V+SLGDAR+Y LSTAKN+LGV+ A S AG
Sbjct: 123 FRPGDIVKADVISLGDARSYVLSTAKNELGVIFATSVAG 161
>gi|156058488|ref|XP_001595167.1| hypothetical protein SS1G_03256 [Sclerotinia sclerotiorum 1980]
gi|154701043|gb|EDO00782.1| hypothetical protein SS1G_03256 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 211
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 113/186 (60%), Gaps = 21/186 (11%)
Query: 9 VLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPP-PDSPDQRPT------ 61
++ PG++LG ++E G G ++ H+ +YAS+ G ++T++PP P P +R T
Sbjct: 8 LVAVPGQLLGSSSEYLPGPGTHI--HSSNLYASILGPIKTVAPPKPSYPQKRATKITPAA 65
Query: 62 -----------VEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSG 110
VTG KA +PE S V+ RVT++ R A+ I+ VG + ++ G
Sbjct: 66 LVPLSTVSIERATVTGDKAEI-IPEVNSTVLCRVTRITPRQATVAILVVGETVLEGEWQG 124
Query: 111 IIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
+IR QDVRATE DKV + SFRPGDIVRA V+SLGD Y+LSTA+N+LGV+ A S AG
Sbjct: 125 LIRVQDVRATEKDKVKIFESFRPGDIVRAVVISLGDQSNYYLSTARNELGVIMATSEAGN 184
Query: 171 LVYCIS 176
+Y +S
Sbjct: 185 AMYPVS 190
>gi|154310662|ref|XP_001554662.1| hypothetical protein BC1G_06805 [Botryotinia fuckeliana B05.10]
gi|347839438|emb|CCD54010.1| similar to 3'-5' exoribonuclease CSL4 [Botryotinia fuckeliana]
Length = 209
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 113/186 (60%), Gaps = 21/186 (11%)
Query: 9 VLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPP-PDSPDQRPT------ 61
++ PG++LG ++E G G ++ H+ +YAS+ G ++T++PP P P +R T
Sbjct: 6 LVAVPGQLLGSSSEYLPGPGTHI--HSSNLYASILGPIKTVAPPKPSYPQKRATKITPAA 63
Query: 62 -----------VEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSG 110
+TG KA +PE S V+ RVT++ R A+ I+ VG + ++ G
Sbjct: 64 PVPLSTISIERATLTGDKAEI-LPEVNSTVLCRVTRITPRQATVAILVVGETVLEGEWQG 122
Query: 111 IIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
+IR QDVRATE DKV + SFRPGDIVRA V+SLGD Y+LSTAKN+LGV+ A S AG
Sbjct: 123 LIRVQDVRATEKDKVKIFESFRPGDIVRAVVISLGDQSNYYLSTAKNELGVIMATSEAGN 182
Query: 171 LVYCIS 176
+Y +S
Sbjct: 183 AMYPVS 188
>gi|260828057|ref|XP_002608980.1| hypothetical protein BRAFLDRAFT_287100 [Branchiostoma floridae]
gi|229294334|gb|EEN64990.1| hypothetical protein BRAFLDRAFT_287100 [Branchiostoma floridae]
Length = 190
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 102/174 (58%), Gaps = 6/174 (3%)
Query: 8 MVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGH 67
+ TPGE L + +AG G YV H+G +Y+ L G + + VEV
Sbjct: 3 FLFYTPGERLFSTADCEAGPGTYV--HHGYIYSCLAGYMHKRK---TEGKELSIVEVIRQ 57
Query: 68 KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDM 127
K VP GS+V A+VT V RM I CV ++RE F G+IR++DVRATE D+V+M
Sbjct: 58 KEDA-VPRIGSIVTAKVTSVSGRMCKCAITCVERTTLREPFRGLIRKEDVRATEKDRVEM 116
Query: 128 HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
+ FRPGDIV A VLSLGDA Y LSTA+N+LGVV A S AG + +S D+
Sbjct: 117 YKCFRPGDIVLARVLSLGDANCYLLSTAENELGVVLALSEAGAQMVPVSWCDMQ 170
>gi|255071805|ref|XP_002499577.1| predicted protein [Micromonas sp. RCC299]
gi|226514839|gb|ACO60835.1| predicted protein [Micromonas sp. RCC299]
Length = 202
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 104/168 (61%), Gaps = 14/168 (8%)
Query: 11 VTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV------ 64
V PGE L A EV++G G YV + V A++ G RT D+ D+RP VEV
Sbjct: 5 VLPGEPLRHADEVRSGPGTYVRGKS--VVAAVMGHARTTPAADDADDKRPLVEVIKGPVV 62
Query: 65 ----TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREK--FSGIIRQQDVR 118
TG +PE G V ARV ++ R +I+ V K+V + F GI+RQQDVR
Sbjct: 63 TGDATGRGGGTLLPEVGDEVFARVLRINPRQVWCEIVAVNGKAVNDASGFQGIVRQQDVR 122
Query: 119 ATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAES 166
ATEIDKVDM+ SF P D++RA VLSLGD R+Y+L+TA+N+LGVV A+S
Sbjct: 123 ATEIDKVDMYESFLPADVIRAKVLSLGDQRSYYLTTARNELGVVQAKS 170
>gi|299470812|emb|CBN78635.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 190
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 110/175 (62%), Gaps = 7/175 (4%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHK- 68
+V PG+ LG+A+E +AG G YV +YAS+ G L D +P + V+ K
Sbjct: 4 VVCPGKRLGRASEYRAGPGTYV--RGTYIYASVVGP--KLEQAAADEDGKPYLIVSQPKR 59
Query: 69 --AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
A V + G V+ RVT++ TR A +I+CVG +RE GI+R++D+RATE+DK +
Sbjct: 60 ARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAE 119
Query: 127 MHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
+ S RPGDI+RA V+SLGD+ YFLSTA+N+LGV A+S AG ++ IS ++
Sbjct: 120 VAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQ 174
>gi|302845465|ref|XP_002954271.1| hypothetical protein VOLCADRAFT_76178 [Volvox carteri f.
nagariensis]
gi|300260476|gb|EFJ44695.1| hypothetical protein VOLCADRAFT_76178 [Volvox carteri f.
nagariensis]
Length = 201
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 101/158 (63%), Gaps = 4/158 (2%)
Query: 11 VTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAH 70
V G+ LG +AG+G YV +G ++A + GL P +P + V
Sbjct: 11 VCAGDRLGTTDLYEAGEGVYV--RDGFLFAGIVGLQHIEQPA--GRGAKPVLGVVPRGIQ 66
Query: 71 GPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLS 130
VP+PG +V ++++V A A ++CVG +++ +F G+IRQQDVRATEID+V M+
Sbjct: 67 PLVPKPGDLVTVKISRVAQTAAMALVLCVGRQALSTEFKGVIRQQDVRATEIDRVVMYDC 126
Query: 131 FRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTA 168
FRPGDIVRA V+SLGDAR+Y+LSTAKN+LGVV A S A
Sbjct: 127 FRPGDIVRAEVVSLGDARSYYLSTAKNELGVVYARSAA 164
>gi|196009890|ref|XP_002114810.1| hypothetical protein TRIADDRAFT_50612 [Trichoplax adhaerens]
gi|190582872|gb|EDV22944.1| hypothetical protein TRIADDRAFT_50612 [Trichoplax adhaerens]
Length = 194
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 102/171 (59%), Gaps = 6/171 (3%)
Query: 11 VTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAH 70
V PG+ LG + AG G YV + + +YASL G +S Q P +++
Sbjct: 9 VIPGQRLGSIDQFSAGLGTYVRQRH--IYASLVGYKDIIS----QAGQLPKIQIKTGNVS 62
Query: 71 GPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLS 130
+P G VV A+V V R I+C+G ++E F G IR++D+RATE DKVDM+
Sbjct: 63 CNLPTIGKVVTAKVLNVNPRFCRVLIICIGTTPLKEPFKGTIRKEDIRATEKDKVDMYNC 122
Query: 131 FRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
F+PGD V A V+SLGD R+Y+LSTAKN+LGV+ A+STAG + IS ++
Sbjct: 123 FKPGDAVLAEVISLGDPRSYYLSTAKNELGVIFAKSTAGHPMVPISWTEMQ 173
>gi|320167986|gb|EFW44885.1| hypothetical protein CAOG_02891 [Capsaspora owczarzaki ATCC 30864]
Length = 231
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 86/115 (74%), Gaps = 1/115 (0%)
Query: 67 HKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
H A+ P+P G+VV A VT + +R A +I+CVG+ +RE F G+IR QDVR TE DKV+
Sbjct: 102 HDAN-PIPAIGNVVTATVTSITSRFAKVNILCVGSSPLREPFHGMIRIQDVRETEKDKVE 160
Query: 127 MHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
M+ SFRPGDIVRA V+SLGD+R+YFL+T+KNDLGVV AES AG + +S ++
Sbjct: 161 MYKSFRPGDIVRAEVISLGDSRSYFLATSKNDLGVVFAESAAGASMLPVSWCEMQ 215
>gi|167537131|ref|XP_001750235.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771225|gb|EDQ84894.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 102/165 (61%), Gaps = 7/165 (4%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVE-----V 64
+V PG L KA + AG+G YV +H+ V ASL G + +P P + V+ V
Sbjct: 14 VVLPGTRLAKADDYAAGEGTYV-RHD-RVCASLRGTVVIHTPEPSEDEDAAKVKAVLRVV 71
Query: 65 TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDK 124
G +P GS V +VT + T+ A I+CV K V +FSGIIR QD+RA E DK
Sbjct: 72 RGGAVPSLMPSVGSTVTCKVTSINTQQARVVILCVDGKPVATRFSGIIRIQDIRALEKDK 131
Query: 125 VDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
V+MH SFRP D+V A V+SLGDAR+Y+LSTA++ LGV++A S AG
Sbjct: 132 VEMHSSFRPNDVVLARVISLGDARSYYLSTAEDALGVIAARSEAG 176
>gi|406866517|gb|EKD19557.1| exosomal core protein CSL4 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 214
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 107/186 (57%), Gaps = 24/186 (12%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLL-RTLSPPPDSPDQR------------ 59
PG+VLG +E G G +V HN +YAS+ G + +T+ P P P +R
Sbjct: 10 PGQVLGLTSEYLPGPGVHV--HNSTLYASILGPVSKTVPPKPAGPQKRLTKITPAAPVAL 67
Query: 60 PTVEV------TGHKAHGP---VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSG 110
PT+ + G G +PE S V+ RVT++ R A+ I+ VG + ++ G
Sbjct: 68 PTLSIERNFTTAGESGTGKKEILPEVNSTVLCRVTRIAPRQATVAILVVGETVLDGEWQG 127
Query: 111 IIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
IIR QDVRATE DKV + SFRPGDIVRA+V+SLGD Y+LSTA N LGV+ A S AG
Sbjct: 128 IIRVQDVRATEKDKVKIFESFRPGDIVRANVVSLGDQSNYYLSTATNSLGVIMATSEAGN 187
Query: 171 LVYCIS 176
+Y +S
Sbjct: 188 PMYPVS 193
>gi|171693975|ref|XP_001911912.1| hypothetical protein [Podospora anserina S mat+]
gi|170946936|emb|CAP73740.1| unnamed protein product [Podospora anserina S mat+]
Length = 218
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 107/192 (55%), Gaps = 27/192 (14%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSP--------------PPDS 55
L PG++LG + + G G ++ HN V+ASL G + P P +
Sbjct: 8 LAIPGQLLGSTSRYQPGPGTHIHNHN--VHASLMGTVHIAQPAKAPGPVKRLTKITPAPA 65
Query: 56 PDQRPTVEVT-----------GHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSV 104
P + PT+ VT G K +PE G+VV+ RV ++ R A I+ G +
Sbjct: 66 PAELPTISVTVPTRSAGSDHAGQKKREVLPEVGNVVLCRVIRITPRQAVVSILVCGDTVL 125
Query: 105 REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
++ G+IR QDVRATE D+V ++ SFRPGDIVRA V+SLGD Y+LSTA+N+LGV+ A
Sbjct: 126 DAEWQGLIRVQDVRATEKDRVKIYESFRPGDIVRAEVISLGDQANYYLSTARNELGVILA 185
Query: 165 ESTAGKLVYCIS 176
S AG ++ +S
Sbjct: 186 TSEAGNAMHPVS 197
>gi|322693070|gb|EFY84945.1| exosomal core protein CSL4 [Metarhizium acridum CQMa 102]
Length = 246
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 108/178 (60%), Gaps = 16/178 (8%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSP--PP-----------DSPDQR 59
PG +LG A++ G G ++ H G V +SL G +R +P PP +P++
Sbjct: 50 PGNILGPASKYNPGPGTHI--HQGNVVSSLLGRVRVTAPAKPPGPAKRLNKITAPAPEEL 107
Query: 60 PTVEVTGH-KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVR 118
PT+ V H + +P+ +VV+ARV ++M + A I VG ++ ++ G+IR QDVR
Sbjct: 108 PTLSVARHGRKREILPDVNNVVLARVVRLMPKQAIVVIQQVGDTVLQTEWQGVIRVQDVR 167
Query: 119 ATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
ATE DKV M+ SF+PGDIVRA V+SLGD Y+LSTA N+LGV+ A S AG + +S
Sbjct: 168 ATEKDKVKMYESFKPGDIVRAQVISLGDQANYYLSTASNELGVIMATSEAGNDMVPVS 225
>gi|402082259|gb|EJT77404.1| 3'-5' exoribonuclease CSL4 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 219
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 106/183 (57%), Gaps = 22/183 (12%)
Query: 14 GEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPP-PDSPDQRP------------ 60
G++LG AT+ +AG G +V H +YASL G + PP P P +RP
Sbjct: 19 GQLLGPATKYRAGPGTHV--HESNLYASLLGAIHVSQPPKPAGPAKRPNRIVAAVAPPSS 76
Query: 61 -------TVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIR 113
+ E ++ +P+ G++V+ RVT++ A I+ +G + ++ G+IR
Sbjct: 77 SLPVISVSREPQQRRSAKVLPDVGNLVLCRVTRISYAQAIVSILAIGDAVLDAEWQGVIR 136
Query: 114 QQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVY 173
+DVRATE D+V +H SFRPGDIVRA V+SLGD Y+LSTA N+LGV+ A S AG +Y
Sbjct: 137 VRDVRATEKDRVRIHESFRPGDIVRAQVISLGDQANYYLSTASNELGVIMATSEAGNPMY 196
Query: 174 CIS 176
+S
Sbjct: 197 PVS 199
>gi|405976441|gb|EKC40947.1| 3'-5' exoribonuclease CSL4-like protein, partial [Crassostrea
gigas]
Length = 193
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 91/154 (59%), Gaps = 6/154 (3%)
Query: 23 VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIA 82
K G G Y NG +Y+SL G L T + D + +EV + VP ++V
Sbjct: 16 CKRGNGTY--SRNGYIYSSLAGYLHT----SEDEDGKSLIEVKTQEEQNVVPSVDAIVTT 69
Query: 83 RVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVL 142
R+T V R I+ VG +RE F G IR++DVRATE DKV+M+ FRPGDIV A VL
Sbjct: 70 RITNVNPRFCKCLILSVGKIPLREPFRGQIRKEDVRATEKDKVEMYKCFRPGDIVVAKVL 129
Query: 143 SLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
SLGDA +Y LSTA+N+LGVV A S AG + IS
Sbjct: 130 SLGDAHSYILSTAENELGVVIATSEAGATLEPIS 163
>gi|198422997|ref|XP_002122042.1| PREDICTED: similar to exosome component 1 [Ciona intestinalis]
Length = 209
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 98/164 (59%), Gaps = 5/164 (3%)
Query: 6 EEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVT 65
EE + PGE LG + + + GKG YV +G V+AS+ G ++ S D P + V
Sbjct: 2 EENSICIPGERLGSSEQYQPGKGTYV--RHGFVFASIAGSIKKES---DKSGNLPLIHVQ 56
Query: 66 GHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKV 125
+P+ G +VI ++T++ + A I+ V + F GIIR++DVRAT DKV
Sbjct: 57 SIHTKQHIPQIGGIVICKMTQLTSAFAKCKIISVQGSNHTAAFRGIIRKEDVRATNRDKV 116
Query: 126 DMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
+++ SFRPGDIV A VLSLGDA Y LSTA+N+LGVV A S G
Sbjct: 117 EIYKSFRPGDIVVARVLSLGDALCYLLSTAENELGVVVALSENG 160
>gi|452843739|gb|EME45674.1| hypothetical protein DOTSEDRAFT_128511 [Dothistroma septosporum
NZE10]
Length = 190
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 105/168 (62%), Gaps = 9/168 (5%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQR-PTVEVTGHKAHG 71
PG+VLG T G+G ++ HN + AS+ G + LS P S + PTV +T
Sbjct: 7 PGQVLGPTTSNDLGEGTHI--HNTQLCASIPGQI--LSQPSTSKSSKLPTVSIT-RTTGN 61
Query: 72 PVPEPGSVVIARVTKVMTRMASADIMCVGAKS---VREKFSGIIRQQDVRATEIDKVDMH 128
+PE G+VV+ ++T+ + A+ I+ +G+ R+ F +IRQQD+RATEIDKV +
Sbjct: 62 LLPEVGTVVLGKITRTGPKQANISILAIGSGGEHVCRDPFPALIRQQDIRATEIDKVKVT 121
Query: 129 LSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
SFR GD+VRA V+SLGD R+Y+L TAKN+LGVV A S G ++ IS
Sbjct: 122 ESFRVGDVVRAVVISLGDERSYYLGTAKNELGVVLATSEWGNQMFPIS 169
>gi|340914869|gb|EGS18210.1| putative exosome 3'->5 protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 220
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 109/197 (55%), Gaps = 29/197 (14%)
Query: 7 EMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSP--------------P 52
+ L PG++LG ++ + G G +V + N +Y+SL G + P P
Sbjct: 5 QPTLALPGQLLGPISKYQPGPGTHVHESN--LYSSLLGTVHVTQPARAPGPVKRLNRITP 62
Query: 53 PDSPDQRPTVEVTGHKAHGP-------------VPEPGSVVIARVTKVMTRMASADIMCV 99
+P + PT+ V+ + G +PE G++V+ RV ++ R A I+
Sbjct: 63 APTPAELPTISVSAARPAGSAASGLVTGRKREILPEVGNIVLCRVIRITPRQAVVTILVC 122
Query: 100 GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDL 159
G + ++ G+IR QD+RATE D+V ++ SFRPGDIVRA V+SLGD Y+LSTA+N+L
Sbjct: 123 GDTVLDAEWQGLIRVQDIRATEKDRVKVYESFRPGDIVRAEVISLGDQANYYLSTARNEL 182
Query: 160 GVVSAESTAGKLVYCIS 176
GV+ A S AG +Y +S
Sbjct: 183 GVILATSEAGNTMYPVS 199
>gi|346974230|gb|EGY17682.1| 3'-5' exoribonuclease CSL4 [Verticillium dahliae VdLs.17]
Length = 306
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 107/185 (57%), Gaps = 19/185 (10%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPP---------------DSPD 57
PG LG A+ ++G G ++ H G+V +SL G + +P +SP
Sbjct: 12 PGTALGPASRYRSGAGTHI--HEGIVVSSLLGRVTVDTPASANGPAKRLTRIAGVLNSPA 69
Query: 58 QRPTVEVTGH--KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQ 115
R T+ V+ H K +P+ ++V+ RV ++M R A I VG ++ ++ G+IR Q
Sbjct: 70 DRATISVSRHGGKKREALPDVSNIVLCRVLRLMPRQAIVSIQQVGDTVLQTEWQGVIRSQ 129
Query: 116 DVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCI 175
DVRATE DK+ +H +F+PGDIV+A V+SLGD Y+LSTA N+LGV+ A S AG + +
Sbjct: 130 DVRATEKDKIKIHEAFKPGDIVKAQVISLGDQANYYLSTASNELGVIMATSEAGNDMVPV 189
Query: 176 SKYDL 180
S D+
Sbjct: 190 SWKDV 194
>gi|156407009|ref|XP_001641337.1| predicted protein [Nematostella vectensis]
gi|156228475|gb|EDO49274.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 106/175 (60%), Gaps = 7/175 (4%)
Query: 7 EMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTG 66
E + PGE LG A + AG G Y ++H G +Y+ L G R + D + + +
Sbjct: 2 EASIAVPGERLGSAEQYSAGNGTY-SRH-GHIYSCLAGY-RHVEKDGD----KSVMSIVR 54
Query: 67 HKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
+ VP+ GS+V +VT V R A I+ V + +++E F G+IR++DVRATE D+V+
Sbjct: 55 EEEKDVVPKIGSIVTCKVTSVNPRFCKAAILGVESTALKETFRGMIRKEDVRATEKDRVE 114
Query: 127 MHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
++ FRPGDIV A V SLGDA +Y LSTA+N+LGVV A+S AG + IS ++
Sbjct: 115 IYKCFRPGDIVVARVTSLGDAHSYLLSTAENELGVVFAKSEAGATMVPISWCEMQ 169
>gi|300121793|emb|CBK22367.2| unnamed protein product [Blastocystis hominis]
Length = 206
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 96/165 (58%), Gaps = 8/165 (4%)
Query: 5 EEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV 64
E V PG+ +G E + G G + +NG++Y+S+ G T P + + P + V
Sbjct: 3 ENHEFRVVPGDRIGSCEEFECGDGVFA--NNGIIYSSIVG---TRKQKPGT--KLPIIYV 55
Query: 65 TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDK 124
K +P G +V+ARVT V MAS I+CV +V F G IR+ VRA EIDK
Sbjct: 56 EPAK-QVIIPNVGDIVLARVTYVTAVMASLHILCVNGVAVTSYFRGTIRKNHVRAFEIDK 114
Query: 125 VDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
V M+ SFR GDIVRA VLS GD R+YFLST +NDLGV+ A S G
Sbjct: 115 VVMYNSFRIGDIVRARVLSRGDRRSYFLSTDQNDLGVILATSATG 159
>gi|302416711|ref|XP_003006187.1| 3'-5' exoribonuclease CSL4 [Verticillium albo-atrum VaMs.102]
gi|261355603|gb|EEY18031.1| 3'-5' exoribonuclease CSL4 [Verticillium albo-atrum VaMs.102]
Length = 211
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 105/181 (58%), Gaps = 19/181 (10%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPP---------------DSPD 57
PG LG A+ ++G G ++ H G++ +SL G + +P +SP
Sbjct: 12 PGTALGPASRYRSGAGTHI--HEGIIVSSLLGRVTVDTPASANGPAKRLTRIAGVLNSPA 69
Query: 58 QRPTVEVTGH--KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQ 115
R T+ V+ H K +P+ ++V+ RV ++M R A I VG ++ ++ G+IR Q
Sbjct: 70 DRATISVSRHGGKKREALPDVSNIVLCRVLRLMPRQAIVSIQQVGDTVLQTEWQGVIRSQ 129
Query: 116 DVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCI 175
DVRATE DK+ +H +F+PGDIV+A V+SLGD Y+LSTA N+LGV+ A S AG + +
Sbjct: 130 DVRATEKDKIKIHEAFKPGDIVKAQVISLGDQANYYLSTASNELGVIMATSEAGNDMVPV 189
Query: 176 S 176
S
Sbjct: 190 S 190
>gi|85102296|ref|XP_961311.1| hypothetical protein NCU04155 [Neurospora crassa OR74A]
gi|12718206|emb|CAC28750.1| conserved hypothetical protein [Neurospora crassa]
gi|28922854|gb|EAA32075.1| hypothetical protein NCU04155 [Neurospora crassa OR74A]
Length = 214
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 105/186 (56%), Gaps = 21/186 (11%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPP---------------PD 54
+ PG+ LG ++ + G G ++ H +Y+SL G++ P
Sbjct: 10 MAIPGQFLGPVSKFQPGPGTHI--HESNLYSSLLGVVNITQPAKAPGPAKRLNKIINTQT 67
Query: 55 SPDQRPTVEVTGHKAHGP----VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSG 110
+P + PT+ V +PE G++V+ RV ++M R A I+ G + ++ G
Sbjct: 68 TPAELPTISVLRSAGSSDKREVLPEVGNIVLCRVIRIMPRQAVVAILICGDTVLEAEWQG 127
Query: 111 IIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
+IR QDVRATE D+V ++ SFRPGDIVRA V+SLGD +Y+LSTA+N+LGV+ A S AG
Sbjct: 128 LIRVQDVRATEKDRVKIYDSFRPGDIVRAEVISLGDQASYYLSTARNELGVIMATSEAGN 187
Query: 171 LVYCIS 176
+Y ++
Sbjct: 188 TMYPVN 193
>gi|221127674|ref|XP_002162040.1| PREDICTED: exosome complex component CSL4-like [Hydra
magnipapillata]
Length = 193
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 95/160 (59%), Gaps = 6/160 (3%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
L PG+ LG ++ AG G Y+ NG +Y+ L G + D + +EV +K
Sbjct: 8 LAVPGDRLGSVSDYIAGSGTYI--RNGFIYSKLCGNVVAKKEIED----KLVLEVIRNKL 61
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
VPE S+ +V TR+ I+ V S+ KF GIIR++DVRATE DKV M+
Sbjct: 62 QNIVPEVNSIATCKVISNNTRLCKVFILSVNGVSLHGKFIGIIRKEDVRATEKDKVKMYE 121
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
SF PGD++ A +LSLGD+++Y+L+TA+N+LGV+ A S G
Sbjct: 122 SFCPGDVIVARILSLGDSQSYYLTTAENELGVIYASSIHG 161
>gi|336472238|gb|EGO60398.1| hypothetical protein NEUTE1DRAFT_119585 [Neurospora tetrasperma
FGSC 2508]
gi|350294544|gb|EGZ75629.1| hypothetical protein NEUTE2DRAFT_105638 [Neurospora tetrasperma
FGSC 2509]
Length = 214
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 105/186 (56%), Gaps = 21/186 (11%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPP---------------PD 54
+ PG+ LG ++ + G G ++ H +Y+SL G++ P
Sbjct: 10 MAIPGQFLGPISKFQPGPGTHI--HESNLYSSLLGVVNITQPAKAPGPAKRLNKIINTQT 67
Query: 55 SPDQRPTVEVTGHKAHGP----VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSG 110
+P + PT+ V +PE G++V+ RV ++M R A I+ G + ++ G
Sbjct: 68 TPAELPTISVLRSAGSSDKREVLPEVGNIVLCRVIRIMPRQAVVAILICGDTVLEAEWQG 127
Query: 111 IIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
+IR QDVRATE D+V ++ SFRPGDIVRA V+SLGD +Y+LSTA+N+LGV+ A S AG
Sbjct: 128 LIRVQDVRATEKDRVKIYDSFRPGDIVRAEVISLGDQASYYLSTARNELGVIMATSEAGN 187
Query: 171 LVYCIS 176
+Y ++
Sbjct: 188 TMYPVN 193
>gi|391327251|ref|XP_003738118.1| PREDICTED: exosome complex component CSL4-like isoform 2
[Metaseiulus occidentalis]
Length = 198
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 97/163 (59%), Gaps = 7/163 (4%)
Query: 9 VLVTPGEVLGKATEVK--AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTG 66
++ PG+ + E K +G G Y G +YASLTG+L+ ++ VE+
Sbjct: 7 LMCVPGKRICALAEDKFISGPGTY--SQQGYIYASLTGVLQITK---QDDGKKSLVEIRR 61
Query: 67 HKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
VP PGSVV +VT + R A I+C+ ++E F G+IR++DVRA E DKV+
Sbjct: 62 PMGRLAVPTPGSVVTCKVTSINQRYAKVSILCIEETELKEPFRGVIRREDVRAFEKDKVE 121
Query: 127 MHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
M SF PGD+V A L++GDA +Y L+TA+N+LGVV A S+AG
Sbjct: 122 MVKSFHPGDVVLAKTLTMGDAMSYILTTAENELGVVIALSSAG 164
>gi|345560325|gb|EGX43450.1| hypothetical protein AOL_s00215g186 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 102/191 (53%), Gaps = 22/191 (11%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRT--------------------L 49
LV PG+ LG + G+G +V NG + ASL G + T
Sbjct: 4 LVVPGQPLGPVSAYIPGQGVHV--FNGQIIASLVGQVVTNPQTTTTTTSTSTSTSTSTPT 61
Query: 50 SPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFS 109
+ PP Q+P + +PE S V+ R+T++ R A+A I V ++F
Sbjct: 62 AVPPTISVQKPVLTTDEETNATLLPEVSSTVLCRITRINPRQATASIFIVNNHICGDEFQ 121
Query: 110 GIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
G+IR QDVR TE+DKV + SFRPGDIVRA V+SLGD Y+LSTA N+LGV+ A+S G
Sbjct: 122 GVIRVQDVRLTEVDKVKIFNSFRPGDIVRAKVISLGDQSNYYLSTASNELGVIMADSEMG 181
Query: 170 KLVYCISKYDL 180
+Y I+ ++
Sbjct: 182 DPMYPINWKEM 192
>gi|440789538|gb|ELR10845.1| RNA-binding domain-containing protein [Acanthamoeba castellanii
str. Neff]
Length = 240
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 105/187 (56%), Gaps = 33/187 (17%)
Query: 6 EEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQR------ 59
E +V PG+ +G A + AG+G YV +YAS+ G R LSP + QR
Sbjct: 24 EAGAVVVPGQRVGHAEDYAAGEGTYV--RGSHIYASVLGRRRLLSP---AEAQRWREGLN 78
Query: 60 ---PTVEVTGHKAHGP-------------------VPEPGSVVIARVTKVMTRMASADIM 97
V G + G VP G VV V +V R+A+ +I
Sbjct: 79 VGEEASPVNGGEDAGKSVVVVEKAGGRGLGGGGGWVPRAGDVVTGVVVRVTPRVAAVNIA 138
Query: 98 CVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKN 157
CVG +++ E FSGI+R QDVRAT ++V+++ +FRPGD+VRA VLSLGDAR+YFLST +N
Sbjct: 139 CVGRRALPETFSGIVRSQDVRATATEQVELYKAFRPGDVVRAEVLSLGDARSYFLSTGRN 198
Query: 158 DLGVVSA 164
DLGVVSA
Sbjct: 199 DLGVVSA 205
>gi|391327249|ref|XP_003738117.1| PREDICTED: exosome complex component CSL4-like isoform 1
[Metaseiulus occidentalis]
Length = 195
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 96/162 (59%), Gaps = 7/162 (4%)
Query: 10 LVTPGEVLGKATEVK--AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGH 67
+ PG+ + E K +G G Y G +YASLTG+L+ ++ VE+
Sbjct: 5 MCVPGKRICALAEDKFISGPGTY--SQQGYIYASLTGVLQITK---QDDGKKSLVEIRRP 59
Query: 68 KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDM 127
VP PGSVV +VT + R A I+C+ ++E F G+IR++DVRA E DKV+M
Sbjct: 60 MGRLAVPTPGSVVTCKVTSINQRYAKVSILCIEETELKEPFRGVIRREDVRAFEKDKVEM 119
Query: 128 HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
SF PGD+V A L++GDA +Y L+TA+N+LGVV A S+AG
Sbjct: 120 VKSFHPGDVVLAKTLTMGDAMSYILTTAENELGVVIALSSAG 161
>gi|336257905|ref|XP_003343774.1| hypothetical protein SMAC_04432 [Sordaria macrospora k-hell]
gi|380091597|emb|CCC10729.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 107/188 (56%), Gaps = 25/188 (13%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPP---------------PD 54
+ PG+ LG ++ + G G ++ H + ASL G++ P
Sbjct: 10 MAIPGQFLGPVSKFQPGPGTHI--HESNLCASLLGVVNITQPAKAPGPAKRLNKIINTQT 67
Query: 55 SPDQRPTVEVTGHKAHGP------VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKF 108
SP + PT+ V +A G +PE G++V+ RV ++M R A I+ G + ++
Sbjct: 68 SPAELPTISVL--RAAGSSDKREVLPEVGNIVLCRVIRIMPRQAVVAILICGDTVLEAEW 125
Query: 109 SGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTA 168
G+IR QDVRATE D+V ++ SFRPGDIVRA V+SLGD +Y+LSTA+N+LGV+ A S A
Sbjct: 126 QGLIRVQDVRATEKDRVKIYDSFRPGDIVRAEVISLGDQASYYLSTARNELGVIMATSEA 185
Query: 169 GKLVYCIS 176
G +Y ++
Sbjct: 186 GNTMYPVN 193
>gi|348536789|ref|XP_003455878.1| PREDICTED: exosome complex component CSL4-like [Oreochromis
niloticus]
Length = 194
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 109/182 (59%), Gaps = 9/182 (4%)
Query: 8 MVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG-LLRTLSPPPDSPDQRPTVEVTG 66
M L PG+ L + + G G Y+ +G +Y+SL G +LR + ++ P + V
Sbjct: 4 MKLCVPGDKLCSSEDCIPGTGVYL--RHGYIYSSLAGYVLRK-----NEGEELPVISVVR 56
Query: 67 HKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
+P+ G++V +VT + R A I+ VG+ ++++F G IR++DVRATE DKV+
Sbjct: 57 ETETQLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVE 116
Query: 127 MHLSFRPGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAGKLVYCISKYDLNIILF 185
+ SFRPGDIV A V+SLGD ++ Y L+TA+N+LGVV A S AG + IS ++ L
Sbjct: 117 TYKSFRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPLT 176
Query: 186 YS 187
+S
Sbjct: 177 HS 178
>gi|126272914|ref|XP_001366739.1| PREDICTED: exosome complex component CSL4-like [Monodelphis
domestica]
Length = 195
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 97/158 (61%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL+G L S + P V VT
Sbjct: 10 PGERLCNVEEASPGSGTYT--RHGYIFSSLSGCLVKTS----DNGELPVVSVTRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGTIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|440635670|gb|ELR05589.1| hypothetical protein GMDG_01780 [Geomyces destructans 20631-21]
Length = 218
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 103/189 (54%), Gaps = 27/189 (14%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPP-------------PDSPDQR 59
PG+ LG +T+ G G ++ H ++AS+ G + PP P +P
Sbjct: 11 PGQPLGASTKYIPGPGTHL--HLSQIHASILGPIHLTHPPKPVGPQKRLTKITPSAPTPL 68
Query: 60 PTVEVTGHKA------------HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREK 107
PT+ V A +PE S+V+ RVT++ R AS I+ VG +
Sbjct: 69 PTISVLRSPALDTKPGEVQTAKREAIPEVSSIVLCRVTRITARQASVAILVVGETVGEGE 128
Query: 108 FSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAEST 167
+ G++R QDVRATE D+V + SFRPGD+VRA V+SLGD Y+LSTA+NDLGV+ A S
Sbjct: 129 WQGVVRVQDVRATEKDRVKIAESFRPGDVVRAIVISLGDQSNYYLSTARNDLGVLMATSD 188
Query: 168 AGKLVYCIS 176
AG ++ +S
Sbjct: 189 AGNAMHPVS 197
>gi|432847858|ref|XP_004066185.1| PREDICTED: exosome complex component CSL4-like [Oryzias latipes]
Length = 195
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 98/162 (60%), Gaps = 7/162 (4%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
L PG+ L + G G Y+ +G +Y+SL G + + +Q P + V
Sbjct: 6 LCVPGDKLCSVEDCILGTGVYL--RHGYIYSSLAGYVLK----KNEGEQLPVISVVRETE 59
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
+P+ G++V +VT + +R A I+ VG+ +++ F G IR++DVRATE DKV+MH
Sbjct: 60 VQLLPDVGAIVTCKVTSINSRFAKVHILYVGSTPLKDLFRGTIRKEDVRATEKDKVEMHR 119
Query: 130 SFRPGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAGK 170
SFRPGDIV A V+SLGD ++ Y L+TA+N+LGVV A S A +
Sbjct: 120 SFRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSDAAR 161
>gi|303277897|ref|XP_003058242.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460899|gb|EEH58193.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 196
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 100/161 (62%), Gaps = 8/161 (4%)
Query: 11 VTPGEVLGKATEVKAGKGAYVA-KHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV----T 65
V PGE L A E G G YV KH V A++ G R + D+ D+RPT+EV T
Sbjct: 7 VCPGERLRFAEEFLPGPGTYVRDKH---VLAAVVGDARVVPAADDAEDRRPTIEVVRRGT 63
Query: 66 GHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKV 125
+P+ G V A+VT+ ++A+ +I+CV + + F+GI+R ++RA+E ++
Sbjct: 64 ARVGGLLLPQIGDEVFAKVTRTNPKLANVEIVCVNGLACADPFNGIVRVSEIRASETAEL 123
Query: 126 DMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAES 166
D+H F PGDI+R ++SLGDAR+Y++STA+N+LGVV A S
Sbjct: 124 DLHDCFVPGDIIRGRIISLGDARSYYVSTAENELGVVRARS 164
>gi|389626809|ref|XP_003711058.1| 3'-5' exoribonuclease CSL4 [Magnaporthe oryzae 70-15]
gi|351650587|gb|EHA58446.1| 3'-5' exoribonuclease CSL4 [Magnaporthe oryzae 70-15]
gi|440466581|gb|ELQ35841.1| 3'-5' exoribonuclease CSL4 [Magnaporthe oryzae Y34]
gi|440486837|gb|ELQ66665.1| 3'-5' exoribonuclease CSL4 [Magnaporthe oryzae P131]
Length = 213
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 105/187 (56%), Gaps = 22/187 (11%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPP-PDSPDQRP-------- 60
L PG++LG ++ +AG G ++ H +Y+SL G + P P P +RP
Sbjct: 9 LALPGQLLGPSSRYRAGPGTHI--HEANLYSSLLGAVSITQPAKPAGPTKRPNKIVKPGM 66
Query: 61 ----------TVEVTGHKAHGP-VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFS 109
T+ V + +PE G VV+ RVT+V + A I+ VG + ++
Sbjct: 67 LSSSAAENLPTISVQRRRRAAAALPEVGDVVLCRVTRVSHQQAIVAILVVGDAVLDAEWQ 126
Query: 110 GIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
G+IR +DVRATE D+V + SFRPGDIVRA V+SLGD Y+L+TA N+LGV+ A S AG
Sbjct: 127 GVIRVRDVRATEKDRVKIGESFRPGDIVRAQVISLGDQANYYLTTASNELGVIMANSDAG 186
Query: 170 KLVYCIS 176
+Y +S
Sbjct: 187 NPMYPVS 193
>gi|321467474|gb|EFX78464.1| hypothetical protein DAPPUDRAFT_305166 [Daphnia pulex]
Length = 205
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 98/171 (57%), Gaps = 8/171 (4%)
Query: 1 MVVKEEEMVLV-TPGE-VLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQ 58
M KE + L+ TPG+ + + G G Y G + + L G+++ S D+
Sbjct: 1 MTNKESDKCLICTPGQRICLSDNQYIGGAGTYT--RQGYITSCLAGVVKVTS----QHDK 54
Query: 59 RPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVR 118
R +EV K VP G VV ARVT++ R A I+CV + E F G +R++DVR
Sbjct: 55 RILIEVRSGKEQTVVPSAGDVVTARVTQINPRWARCAILCVKDIVLAEPFRGQLRKEDVR 114
Query: 119 ATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
ATE D+V+M+ FRP DI+ A VLSLGDA +Y LSTA+N+LGVV A S G
Sbjct: 115 ATEKDRVEMYKCFRPNDIILARVLSLGDAHSYVLSTAENELGVVIAYSEEG 165
>gi|429861888|gb|ELA36551.1| exosomal core protein csl4 [Colletotrichum gloeosporioides Nara
gc5]
Length = 238
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 104/188 (55%), Gaps = 29/188 (15%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTG-----------------LLRTLSPPPDS 55
PG+ LG + AG G ++ +NG V ASL G L R + P D
Sbjct: 12 PGKALGSTSRYAAGPGTHI--YNGNVVASLMGKVKVTPSAKASTGPAKRLTRITALPAD- 68
Query: 56 PDQRPTVEV-------TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKF 108
+ PT+ V G K +P+ G+VV+ RV ++M + A I VG ++ ++
Sbjct: 69 --ELPTLSVVPRQAQANGDKKREVLPDVGNVVLCRVVRLMPKQAIVTIQQVGDTVLQTEW 126
Query: 109 SGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTA 168
G+IR QDVRATE DKV ++ SF+PGDIVRA V+SLGD Y+LSTA N+LGV+ A S A
Sbjct: 127 QGVIRSQDVRATEKDKVKIYESFKPGDIVRAQVISLGDQANYYLSTASNELGVIMATSEA 186
Query: 169 GKLVYCIS 176
G + +S
Sbjct: 187 GNDMVPVS 194
>gi|224495967|ref|NP_001139039.1| 3'-5' exoribonuclease CSL4 homolog [Danio rerio]
Length = 194
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 100/164 (60%), Gaps = 9/164 (5%)
Query: 8 MVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG-LLRTLSPPPDSPDQRPTVEVTG 66
M L PGE L + G G Y+ +G ++ASL G +LR + ++ P + V
Sbjct: 4 MKLCVPGERLCSTEDCIPGTGTYL--RHGYIFASLAGYVLRK-----NEGEELPVISVVR 56
Query: 67 HKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
+P+ G++V +VT + R A I+ VG+ ++++F G IR++DVRATE DKV+
Sbjct: 57 ETEAQLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRREDVRATEKDKVE 116
Query: 127 MHLSFRPGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
+ SFRPGDIV A V+SLGD ++ Y L+TA+N+LGVV A S AG
Sbjct: 117 TYKSFRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAG 160
>gi|342879077|gb|EGU80352.1| hypothetical protein FOXB_09149 [Fusarium oxysporum Fo5176]
Length = 208
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 107/179 (59%), Gaps = 18/179 (10%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSP--------------DQ 58
PG VLG T+ G G +V + G V +SL G + T++PP +P ++
Sbjct: 12 PGNVLGPVTKFAPGAGTHV--YEGNVVSSLLGRV-TVTPPTKNPGPQKRLNKITAPTTEE 68
Query: 59 RPTVEVTGH-KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDV 117
T+ V+ H + +P+ ++V+ARV ++M + A I VG ++ ++ G+IR QDV
Sbjct: 69 LATISVSRHGRKREILPDVENIVLARVLRLMPKQAIVVIQQVGDTVLQTEWQGVIRVQDV 128
Query: 118 RATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
RATE DKV ++ SF+PGDIVRA V+SLGD Y+LSTA N+LGVV A S AG + IS
Sbjct: 129 RATEKDKVKIYESFKPGDIVRAQVISLGDQANYYLSTASNELGVVMATSEAGNDMVPIS 187
>gi|400596719|gb|EJP64475.1| exosome component EXOSC1/CSL4 [Beauveria bassiana ARSEF 2860]
Length = 208
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 105/182 (57%), Gaps = 18/182 (9%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSP------------- 56
L PG VLG ++ G G ++ + N V +SL G + T+ PP +P
Sbjct: 9 LAIPGRVLGPVSKYAPGAGTHIFEGN--VVSSLMGNV-TVMPPAKAPGPAKRLNKLTAPS 65
Query: 57 -DQRPTVEVTGH-KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQ 114
D+ T+ V H + +P+ ++V+ARV ++M + A I VG ++ ++ G+IR
Sbjct: 66 SDELSTITVARHGRKREILPDVNNIVLARVVRLMPKQAIVVIQQVGDTVLQTEWQGVIRV 125
Query: 115 QDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYC 174
QDVRATE DKV + SF+PGDIVRA V+SLGD Y+LSTA NDLGV+ A S AG +
Sbjct: 126 QDVRATEKDKVKISESFKPGDIVRAQVISLGDQANYYLSTASNDLGVIMATSEAGNDMVP 185
Query: 175 IS 176
IS
Sbjct: 186 IS 187
>gi|340522313|gb|EGR52546.1| predicted protein [Trichoderma reesei QM6a]
Length = 560
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 105/182 (57%), Gaps = 16/182 (8%)
Query: 9 VLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPP-DSPDQR------PT 61
L PG VLG ++ G G +V + G V +SL G + +P P +R PT
Sbjct: 8 TLAIPGTVLGPTSKYAPGPGTHV--YGGNVVSSLLGNVSVTAPAKAPGPVKRLNKITAPT 65
Query: 62 VE-------VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQ 114
E V + +P+ G++V+ARV ++M + A I VG+ ++ ++ G+IR
Sbjct: 66 AEELSTISVVRRGRKREVLPDVGNIVLARVVRLMPKQAIVVIQQVGSTVLQTEWQGVIRV 125
Query: 115 QDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYC 174
QDVRATE DKV +H SF+PGDIVRA V+SLGD Y+LSTA N+LGV+ A S AG +
Sbjct: 126 QDVRATEQDKVKIHESFKPGDIVRAQVISLGDQANYYLSTAANELGVIMATSDAGNDMVP 185
Query: 175 IS 176
IS
Sbjct: 186 IS 187
>gi|398406060|ref|XP_003854496.1| hypothetical protein MYCGRDRAFT_69638 [Zymoseptoria tritici IPO323]
gi|339474379|gb|EGP89472.1| hypothetical protein MYCGRDRAFT_69638 [Zymoseptoria tritici IPO323]
Length = 187
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 105/168 (62%), Gaps = 9/168 (5%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQR-PTVEVTGHKAHG 71
PG++LG + G G ++ + + AS++G + LS P S + PTV +
Sbjct: 4 PGQILGPTSANSLGTGTHIQGTD--LCASISGPI--LSQPSTSKTSKLPTVSI-ARTTGT 58
Query: 72 PVPEPGSVVIARVTKVMTRMASADIMCVGAKSVR---EKFSGIIRQQDVRATEIDKVDMH 128
+PE G+V++ ++T+ R A+ I+ +G+ + F +IRQQD+RATEIDKV +
Sbjct: 59 LLPEVGTVILGKITRTGPRQANVTILALGSAGEHVCGDAFPALIRQQDIRATEIDKVKVA 118
Query: 129 LSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
SFR GD+VRA+V+SLGD R+Y+L+TA+N+LGVV A+S G +Y IS
Sbjct: 119 ESFRVGDVVRATVISLGDERSYYLTTARNELGVVMAQSEWGNQMYPIS 166
>gi|322705465|gb|EFY97051.1| exosomal core protein CSL4 [Metarhizium anisopliae ARSEF 23]
Length = 208
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 102/178 (57%), Gaps = 16/178 (8%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLL-------------RTLSPPPDSPDQR 59
PG VLG A+ G G + H G V +SL G + R +P++
Sbjct: 12 PGHVLGPASRYTPGPGTHT--HQGNVVSSLLGRVHVAAPAKAPGPAKRLNKITAAAPEEL 69
Query: 60 PTVEVTGH-KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVR 118
PTV V H + +P+ +VV+ARV ++M + A I VG ++ ++ G+IR QDVR
Sbjct: 70 PTVSVARHGRRREILPDVNNVVLARVVRLMPKQAIVVIQQVGDTVLQTEWQGVIRVQDVR 129
Query: 119 ATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
ATE DKV M+ SF+PGDIV+A V+SLGD Y+LSTA N+LGV+ A S AG + +S
Sbjct: 130 ATEKDKVKMYESFKPGDIVKAQVISLGDQANYYLSTASNELGVIMAASEAGNDMVPVS 187
>gi|156538385|ref|XP_001605472.1| PREDICTED: exosome complex component CSL4-like [Nasonia
vitripennis]
Length = 198
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 8/166 (4%)
Query: 5 EEEMVLVTPGEVLGKATEVK-AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVE 63
+++ ++ PG+ L A + AG+G Y + G +Y+ G+++ + D TVE
Sbjct: 3 DKDPIICIPGQRLCPADKTNIAGQGTY--EQLGYIYSKFAGIVKVIKN-----DNTCTVE 55
Query: 64 VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
V G VP PG +V A VT V R I C+G + + GI+R++DVRATE D
Sbjct: 56 VHGMTDQSIVPAPGDIVTAMVTIVNQRFCKCTIKCIGDIVLSRPYRGIVRREDVRATEKD 115
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
+++M+ SFRPGDI+ A VL + +A Y LSTA+N+LGVV A S G
Sbjct: 116 RIEMYKSFRPGDIILARVLPMTEAHTYQLSTAENELGVVIAHSEEG 161
>gi|158297117|ref|XP_317396.3| AGAP008063-PA [Anopheles gambiae str. PEST]
gi|157015041|gb|EAA12694.3| AGAP008063-PA [Anopheles gambiae str. PEST]
Length = 214
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 99/170 (58%), Gaps = 8/170 (4%)
Query: 5 EEEMVLVTPGEVLGKATEVK-AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVE 63
E++ ++ PG++L A+E AG+G Y + G ++A+L G+++ ++ +
Sbjct: 9 EDQTLICVPGQILCAASEFTVAGQGTY--EKLGYIHATLAGIVQM-----KKREKNTFIS 61
Query: 64 VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
V VP G +V AR+T V RMA I+C+G ++ GIIR++DVRATE+D
Sbjct: 62 VVSFGGGATVPVIGDIVTARITAVQNRMARCRILCIGKTALNRTLRGIIRKEDVRATEVD 121
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVY 173
+V+MH FRPGDI+ A VL + + LSTA N+LGVV A S + + +
Sbjct: 122 RVEMHKCFRPGDIILARVLHQIELNVFHLSTADNELGVVVAISPSSRATW 171
>gi|310794374|gb|EFQ29835.1| exosome component EXOSC1/CSL4 [Glomerella graminicola M1.001]
Length = 211
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 105/181 (58%), Gaps = 19/181 (10%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASL-------------TGLLRTLSPPPD-SPDQ 58
PG++LG T AG G +V +NG V ASL TGL + L+ S D+
Sbjct: 12 PGKILGPTTRYAAGPGTHV--YNGNVVASLLGDVTVTPSAKAQTGLTKRLNRITQLSADE 69
Query: 59 RPTVEVTGH---KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQ 115
T+ V K +P+ G++V+ RV ++M + A I VG ++ ++ G+IR Q
Sbjct: 70 LATISVARRGTSKKREVLPDVGNMVLCRVVRLMPKQAIVTIQQVGDTVLQTEWQGVIRSQ 129
Query: 116 DVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCI 175
DVRATE DKV ++ SF+PGD+VRA V+SLGD Y+LSTA N+LGV+ A S AG + +
Sbjct: 130 DVRATEKDKVKIYESFKPGDVVRAQVISLGDQANYYLSTAANELGVIMATSEAGNDMVPV 189
Query: 176 S 176
S
Sbjct: 190 S 190
>gi|224052677|ref|XP_002194864.1| PREDICTED: exosome complex component CSL4 [Taeniopygia guttata]
Length = 195
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 93/157 (59%), Gaps = 7/157 (4%)
Query: 14 GEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPV 73
GE L E AG G Y +G +++SL G L + ++ P V V +
Sbjct: 11 GERLCSTEEATAGSGTYT--RHGFIFSSLAGCLER----KNEDNELPVVSVVRDSKSQLL 64
Query: 74 PEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRP 133
P G+VV +V + +R A I+ VG+ ++ F G IR++D+RATE DKV+++ SFRP
Sbjct: 65 PNVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTIRKEDIRATEKDKVEVYKSFRP 124
Query: 134 GDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
DIV A V+SLGDA++ Y LSTA+N+LGVV A S AG
Sbjct: 125 SDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAG 161
>gi|291404567|ref|XP_002718659.1| PREDICTED: exosomal core protein CSL4 [Oryctolagus cuniculus]
Length = 195
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLTKTS----ENGALPVVSVMREAESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ GS+V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGSIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|313221861|emb|CBY38928.1| unnamed protein product [Oikopleura dioica]
gi|313236825|emb|CBY12077.1| unnamed protein product [Oikopleura dioica]
Length = 199
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 101/176 (57%), Gaps = 7/176 (3%)
Query: 9 VLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHK 68
V PGE LG E +AG+G YV K +YAS G ++ +++ +EV K
Sbjct: 6 VNCVPGERLGSTDECEAGRGTYVRKS--FIYASRIGKVKNTV----DENKKIVIEVI-RK 58
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMH 128
P+P+ GS+V A++ +V R A I V + F G+IR++DVR TE D+V++
Sbjct: 59 DEPPLPQVGSIVTAKIVQVTQRQCRATIYAVDGIATSSPFKGLIRREDVRRTERDRVELS 118
Query: 129 LSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLNIIL 184
FRP DIV A V+SLGD+++Y LST ++LGVV A+S AG + IS ++ L
Sbjct: 119 KCFRPNDIVFAKVMSLGDSQSYLLSTGGDELGVVLAKSRAGVRLEPISWNEMRCPL 174
>gi|148225176|ref|NP_001086901.1| exosome component 1 [Xenopus laevis]
gi|50415689|gb|AAH77633.1| MGC86284 protein [Xenopus laevis]
Length = 194
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 98/170 (57%), Gaps = 7/170 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L + G G + +G ++ASL G + S P + V
Sbjct: 9 PGERLCSTEDCAPGYGTFC--RHGYIFASLAGYIVKKS----DNGLMPIISVVRDTDSHL 62
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ GSVV +VT + +R A IM +G+ +R F G IR++D+RATE DKV+++ SFR
Sbjct: 63 LPDVGSVVTCKVTSINSRFAKVQIMYIGSTPLRNTFRGTIRKEDIRATEKDKVEVYKSFR 122
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
PGDIV A V+SLGD ++ Y LSTA+N+LGVV A S AG + IS ++
Sbjct: 123 PGDIVMAKVISLGDIQSNYLLSTAENELGVVVAHSEAGATMVPISWCEMQ 172
>gi|358389682|gb|EHK27274.1| hypothetical protein TRIVIDRAFT_114665, partial [Trichoderma virens
Gv29-8]
Length = 529
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 16/181 (8%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPP-DSPDQR------PTV 62
L PG +LG A++ +G G ++ + G + +SL G + ++P P +R P+V
Sbjct: 9 LAIPGTILGPASKYASGPGTHI--YEGSIVSSLLGNVAVIAPAKAPGPVKRLNKITAPSV 66
Query: 63 E-------VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQ 115
E + + +P+ G++V+ARV ++M + A I VG ++ ++ G+IR Q
Sbjct: 67 EELATISVIRRGRKREVLPDVGNIVLARVVRLMPKQAIVVIQQVGETVLQTEWQGVIRVQ 126
Query: 116 DVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCI 175
DVRATE DKV +H SF+PGDIVRA V+SLGD Y+LSTA N+LGV+ A S G + I
Sbjct: 127 DVRATEQDKVKIHESFKPGDIVRAQVISLGDQANYYLSTASNELGVIMATSDVGNDMVPI 186
Query: 176 S 176
S
Sbjct: 187 S 187
>gi|367038801|ref|XP_003649781.1| hypothetical protein THITE_2074474 [Thielavia terrestris NRRL 8126]
gi|346997042|gb|AEO63445.1| hypothetical protein THITE_2074474 [Thielavia terrestris NRRL 8126]
Length = 230
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 105/200 (52%), Gaps = 35/200 (17%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLL------RTLSPPPDSPDQR---- 59
LV PG++LG A+ G G ++ H +Y+SL G + R +P P +R
Sbjct: 12 LVIPGQLLGPASRFLPGPGTHL--HESNLYSSLLGQVHITQPARRPAPAQPGPAKRLTKI 69
Query: 60 -----------PTVEVTGH------------KAHGPVPEPGSVVIARVTKVMTRMASADI 96
PT+ V K +PE G++V+ RV ++ R A I
Sbjct: 70 TPAPAPAPAELPTISVAPARAAGAGAGAGAGKRREVLPEVGNIVLCRVIRITPRQAVVAI 129
Query: 97 MCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAK 156
+ G + + G+IR QD+RATE D+V ++ SFRPGDIVRA V+SLGD Y+LSTA+
Sbjct: 130 LVCGDSVLEADWQGLIRVQDIRATEKDRVKVYESFRPGDIVRAEVISLGDQANYYLSTAR 189
Query: 157 NDLGVVSAESTAGKLVYCIS 176
N+LGV+ A S AG +Y +S
Sbjct: 190 NELGVILATSEAGNTMYPVS 209
>gi|346470709|gb|AEO35199.1| hypothetical protein [Amblyomma maculatum]
Length = 193
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 84/140 (60%), Gaps = 7/140 (5%)
Query: 25 AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARV 84
G G YV NG +YASL GL++ L D + VEV + VP PG++V +V
Sbjct: 25 GGDGTYV--QNGYIYASLAGLIKILR----QKDMKTLVEVQRCTSQN-VPAPGNIVTVKV 77
Query: 85 TKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSL 144
T V R I+ + + E F GIIR++DVR E D V+MH S+R GDIV A V+S+
Sbjct: 78 TSVTPRFCKCSILAIEECELWEPFRGIIRKEDVRELEKDTVEMHKSYRTGDIVLARVISI 137
Query: 145 GDARAYFLSTAKNDLGVVSA 164
GDA +Y+LSTA+N LGVV A
Sbjct: 138 GDALSYYLSTAENKLGVVVA 157
>gi|453082284|gb|EMF10331.1| hypothetical protein SEPMUDRAFT_69392 [Mycosphaerella populorum
SO2202]
Length = 203
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 106/180 (58%), Gaps = 14/180 (7%)
Query: 9 VLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPD---QRPTVEVT 65
++ PG +LG A + G+G ++ N + AS+ G L P ++ Q+ + ++
Sbjct: 5 TILLPGTLLGPADKNSLGEGTHIHAQN--ICASIAGPLAGAGVPTNTSSKSSQKASPTLS 62
Query: 66 GHK-----AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVR----EKFSGIIRQQD 116
H+ + +PE S+++ R+T+ R AS I+ +G + F +IRQQD
Sbjct: 63 IHRTISSSSTALLPEVNSLILGRITRTNPRQASLLILALGPNGEHNVSSDPFPALIRQQD 122
Query: 117 VRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
+RATEIDKV + SFR GDIVRA V+SLGD R+Y+LSTA+N+LGVV AES G ++ +S
Sbjct: 123 IRATEIDKVKVAESFRVGDIVRAVVISLGDERSYYLSTARNELGVVMAESEWGNQMFPVS 182
>gi|109463887|ref|XP_001054866.1| PREDICTED: exosome complex component CSL4-like isoform 1 [Rattus
norvegicus]
gi|354471138|ref|XP_003497800.1| PREDICTED: exosome complex component CSL4-like isoform 1
[Cricetulus griseus]
gi|392345105|ref|XP_003749167.1| PREDICTED: exosome complex component CSL4-like [Rattus norvegicus]
gi|149040177|gb|EDL94215.1| rCG57589, isoform CRA_a [Rattus norvegicus]
gi|149040180|gb|EDL94218.1| rCG57589, isoform CRA_a [Rattus norvegicus]
Length = 195
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLTKTS----ENGALPVVSVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G+VV +V+ + +R A I+ VG+ ++ F G IR++D+RATE DKV+++ SFR
Sbjct: 64 LPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|348588120|ref|XP_003479815.1| PREDICTED: exosome complex component CSL4-like isoform 1 [Cavia
porcellus]
Length = 195
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLTKRS----ENGALPVVSVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|62751675|ref|NP_001015529.1| exosome complex component CSL4 [Bos taurus]
gi|59858307|gb|AAX08988.1| exosomal core protein CSL4 [Bos taurus]
gi|126717389|gb|AAI33441.1| Exosome component 1 [Bos taurus]
gi|296472668|tpg|DAA14783.1| TPA: exosomal core protein CSL4 [Bos taurus]
gi|440901550|gb|ELR52467.1| 3'-5' exoribonuclease CSL4-like protein [Bos grunniens mutus]
Length = 195
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P + V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLTKTS----ENGALPVISVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|344274905|ref|XP_003409255.1| PREDICTED: exosome complex component CSL4-like [Loxodonta africana]
Length = 195
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLTKSS----ENGALPVVSVRRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G+VV +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|410917201|ref|XP_003972075.1| PREDICTED: exosome complex component CSL4-like [Takifugu rubripes]
Length = 193
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 105/176 (59%), Gaps = 7/176 (3%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L A + G G Y+ +G +++SL G + S + P + V
Sbjct: 8 PGEKLCSAEDCVLGTGVYL--RHGYIHSSLAGYVVRKS----EGKELPMISVVRGTELQL 61
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +VT + R A I+ VG+ S+++ F G IR++DVRATE DKV+++ SFR
Sbjct: 62 LPDVGAIVTCKVTSINPRFAKVHILKVGSTSLKDHFKGTIRKEDVRATEKDKVEIYKSFR 121
Query: 133 PGDIVRASVLSLGDAR-AYFLSTAKNDLGVVSAESTAGKLVYCISKYDLNIILFYS 187
PGDIV A V+SLG+ +Y L+TA+N+LGVV A S +G ++ IS ++ L Y+
Sbjct: 122 PGDIVLAKVMSLGNVESSYLLTTAENELGVVVAHSESGAVMVPISWSEMQCPLTYA 177
>gi|403259803|ref|XP_003922387.1| PREDICTED: exosome complex component CSL4 [Saimiri boliviensis
boliviensis]
Length = 195
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLMKSS----ENGALPVVSVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|134081806|emb|CAK42062.1| unnamed protein product [Aspergillus niger]
Length = 204
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 97/178 (54%), Gaps = 13/178 (7%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSP-----------DQ 58
L PG+ LG AG G +V N +YAS+ G + P S +
Sbjct: 8 LAIPGQRLGSIASYAAGPGTHV--QNATIYASIAGPVVVDQAQPSSKAKLILSVSRTGPK 65
Query: 59 RPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVR 118
+ KA+ +P SVV+ARVT+V R A+ I+ + S +F +IR++DVR
Sbjct: 66 KAAAPAPSTKAYNTLPAVDSVVLARVTRVQKRQATVSILVNHSNSDELRFQALIRKEDVR 125
Query: 119 ATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
A E D+V M FR GDIVR +V+SLGD Y+L+TA+NDLGVV A S +G +++ +S
Sbjct: 126 AVEKDRVVMDEMFRVGDIVRGTVISLGDQSFYYLTTARNDLGVVMARSESGNMMFPVS 183
>gi|7705612|ref|NP_057130.1| exosome complex component CSL4 [Homo sapiens]
gi|383872322|ref|NP_001244778.1| exosome component 1 [Macaca mulatta]
gi|114632191|ref|XP_507960.2| PREDICTED: exosome complex component CSL4 [Pan troglodytes]
gi|402881114|ref|XP_003904125.1| PREDICTED: exosome complex component CSL4 [Papio anubis]
gi|14285410|sp|Q9Y3B2.1|EXOS1_HUMAN RecName: Full=Exosome complex component CSL4; AltName: Full=Exosome
component 1
gi|4929685|gb|AAD34103.1|AF151866_1 CGI-108 protein [Homo sapiens]
gi|18314657|gb|AAH22067.1| Exosome component 1 [Homo sapiens]
gi|119570321|gb|EAW49936.1| exosome component 1 [Homo sapiens]
gi|189053953|dbj|BAG36460.1| unnamed protein product [Homo sapiens]
gi|208966238|dbj|BAG73133.1| exosome component 1 [synthetic construct]
gi|325463455|gb|ADZ15498.1| exosome component 1 [synthetic construct]
gi|355562674|gb|EHH19268.1| hypothetical protein EGK_19945 [Macaca mulatta]
gi|355783002|gb|EHH64923.1| hypothetical protein EGM_18255 [Macaca fascicularis]
gi|380813276|gb|AFE78512.1| exosome complex component CSL4 [Macaca mulatta]
gi|384947388|gb|AFI37299.1| exosome complex component CSL4 [Macaca mulatta]
gi|410338323|gb|JAA38108.1| exosome component 1 [Pan troglodytes]
Length = 195
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLMKSS----ENGALPVVSVVRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|22267446|ref|NP_079920.1| exosome complex component CSL4 isoform 1 [Mus musculus]
gi|28380043|sp|Q9DAA6.1|EXOS1_MOUSE RecName: Full=Exosome complex component CSL4; AltName: Full=Exosome
component 1
gi|12838900|dbj|BAB24368.1| unnamed protein product [Mus musculus]
gi|19353756|gb|AAH24423.1| Exosome component 1 [Mus musculus]
gi|148709921|gb|EDL41867.1| exosome component 1, isoform CRA_b [Mus musculus]
Length = 195
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLMKTS----ENGAVPVVSVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G+VV +V+ + +R A I+ VG+ ++ F G IR++D+RATE DKV+++ SFR
Sbjct: 64 LPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|149690173|ref|XP_001501548.1| PREDICTED: exosome complex component CSL4-like [Equus caballus]
Length = 195
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLTKSS----ENGALPVVSVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|426252875|ref|XP_004020128.1| PREDICTED: exosome complex component CSL4 [Ovis aries]
Length = 195
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P + V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLTKTS----ENGALPVISVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVRILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|57107227|ref|XP_534981.1| PREDICTED: exosome complex component CSL4 isoform 1 [Canis lupus
familiaris]
Length = 195
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P + V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLTKSS----ENGALPVISVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGTIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|296220921|ref|XP_002756540.1| PREDICTED: exosome complex component CSL4 [Callithrix jacchus]
Length = 195
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLMKSS----ENGALPVVSVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++D+RATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDIRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|301763224|ref|XP_002917030.1| PREDICTED: 3'-5' exoribonuclease CSL4 homolog [Ailuropoda
melanoleuca]
gi|410975790|ref|XP_003994312.1| PREDICTED: exosome complex component CSL4 [Felis catus]
gi|281348504|gb|EFB24088.1| hypothetical protein PANDA_005192 [Ailuropoda melanoleuca]
gi|355686783|gb|AER98185.1| exosome component 1 [Mustela putorius furo]
Length = 195
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P + V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLTKSS----ENGALPVISVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|122920915|pdb|2NN6|I Chain I, Structure Of The Human Rna Exosome Composed Of Rrp41,
Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, And Rrp40
Length = 209
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 24 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLMKSS----ENGALPVVSVVRETESQL 77
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 78 LPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 137
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 138 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 175
>gi|410215812|gb|JAA05125.1| exosome component 1 [Pan troglodytes]
Length = 195
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTY--PRHGYIFSSLAGCLMKSS----ENGALPVVSVVRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|346319938|gb|EGX89539.1| exosome component 1 [Cordyceps militaris CM01]
Length = 208
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 105/182 (57%), Gaps = 18/182 (9%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSP------------- 56
L PG VLG ++ G G ++ + N V +SL G + T+ PP +P
Sbjct: 9 LAIPGRVLGPVSKYAPGAGTHIFEGN--VVSSLMGNV-TIIPPSKTPGPAKRLNKITAPV 65
Query: 57 -DQRPTVEVTGH-KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQ 114
D+ T+ V H + +P+ ++V+ARV ++M + A I VG ++ ++ G+IR
Sbjct: 66 SDELSTITVARHGRKREILPDVNNIVLARVVRLMPKQAIVVIQQVGDTVLQTEWQGVIRV 125
Query: 115 QDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYC 174
QDVRATE DKV ++ SF+PGD+VRA V+SLGD Y+LSTA N+LGV+ A S G +
Sbjct: 126 QDVRATEKDKVKIYESFKPGDVVRAQVISLGDQANYYLSTASNELGVIMATSEVGNDMVP 185
Query: 175 IS 176
+S
Sbjct: 186 VS 187
>gi|351712058|gb|EHB14977.1| 3'-5' exoribonuclease CSL4-like protein [Heterocephalus glaber]
Length = 195
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLTKSS----ENGALPVVSVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVYILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|47223879|emb|CAG06056.1| unnamed protein product [Tetraodon nigroviridis]
Length = 192
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 105/176 (59%), Gaps = 7/176 (3%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L A + G G Y+ +G +++SL G + + + P + V
Sbjct: 8 PGEKLCSAEDCIPGPGVYL--RHGHIHSSLAGYVIRKT----EGKELPMISVVRGTESQL 61
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +VT + R A I+ VG+ S+++ F G IR++DVRATE DKV+++ SFR
Sbjct: 62 LPDVGAIVTCKVTSINPRFAKVHILKVGSTSLKDHFRGTIRKEDVRATEKDKVEIYKSFR 121
Query: 133 PGDIVRASVLSLGDAR-AYFLSTAKNDLGVVSAESTAGKLVYCISKYDLNIILFYS 187
PGDIV A V+SLG+ +Y L+TA+N+LGVV A S +G ++ IS ++ L Y+
Sbjct: 122 PGDIVLAKVMSLGNVESSYLLTTAENELGVVVAHSESGAVMVPISWSEMQCPLTYA 177
>gi|194041797|ref|XP_001928838.1| PREDICTED: exosome complex component CSL4 [Sus scrofa]
Length = 195
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P + V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLTKSS----ENGALPVISVMRETDSQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSHYLLTTAENELGVVVAHSESG 161
>gi|213404568|ref|XP_002173056.1| exosome subunit Csl4 [Schizosaccharomyces japonicus yFS275]
gi|212001103|gb|EEB06763.1| exosome subunit Csl4 [Schizosaccharomyces japonicus yFS275]
Length = 181
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 98/160 (61%), Gaps = 14/160 (8%)
Query: 9 VLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHK 68
V+V PG+VL + VK G+G V + + L L+ L P ++ V T +
Sbjct: 4 VVVVPGQVLARG--VKGGEGTAV-RGDYL----LSTRLGVYDP------EKHIVSHTNEQ 50
Query: 69 AHGPV-PEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDM 127
PV P+ GS+V+ +VT++ R AS + V +E+F G+I QD+RATE DKV +
Sbjct: 51 VEQPVLPKVGSIVLGQVTRISVRQASIKMTVVDNVCAKEEFQGVIHVQDIRATEKDKVKV 110
Query: 128 HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAEST 167
SFRPGDIVRA V+SLGD +YFLSTA+NDLGV+ A+S+
Sbjct: 111 RQSFRPGDIVRALVISLGDGSSYFLSTARNDLGVIFAQSS 150
>gi|320590466|gb|EFX02909.1| exosome complex subunit [Grosmannia clavigera kw1407]
Length = 229
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 107/203 (52%), Gaps = 38/203 (18%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG--------------------LLRTL 49
+ PG++LG A+ G G ++A +G VYASL G L R +
Sbjct: 8 IAVPGQLLGPASRFVPGAGTHLA--DGQVYASLLGHVSVRQPAEAGKKTAMLPKRLTRIM 65
Query: 50 SPP-----PDSPDQ--------RPTVEVTGHK-AHGP--VPEPGSVVIARVTKVMTRMAS 93
P PD Q + TV V+ + A G +P+ G+ + RV ++ R A
Sbjct: 66 VPSVATKGPDGAAQGSSLADVNKATVSVSRARIAQGGEVLPDVGNTALCRVVRIAQRQAV 125
Query: 94 ADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLS 153
I+ VG + ++ G+IR QDVRATE D+V ++ SFRPGDIVRA V+SLGD Y+LS
Sbjct: 126 VAILVVGDVVLEAEWQGVIRAQDVRATEKDRVKIYESFRPGDIVRAQVISLGDQANYYLS 185
Query: 154 TAKNDLGVVSAESTAGKLVYCIS 176
TA N LGVV A S AG +Y +S
Sbjct: 186 TASNSLGVVMATSEAGNPMYPVS 208
>gi|395828347|ref|XP_003787345.1| PREDICTED: exosome complex component CSL4 [Otolemur garnettii]
Length = 195
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 93/158 (58%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLTKTS----ENGALPVVSVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHGESG 161
>gi|408396471|gb|EKJ75628.1| hypothetical protein FPSE_04129 [Fusarium pseudograminearum CS3096]
Length = 208
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 105/179 (58%), Gaps = 18/179 (10%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSP--------------DQ 58
PG+VLG T+ G G +V + G V +SL G + T++P P D+
Sbjct: 12 PGKVLGPVTKFAPGAGTHV--YEGNVVSSLLGQV-TVTPAAKGPGPQKRLNKITAPTSDE 68
Query: 59 RPTVEVTGH-KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDV 117
+ V+ H + +P+ ++V+ARV ++M + A I VG ++ ++ G+IR QDV
Sbjct: 69 LAAISVSRHGRKREILPDVDNIVLARVLRLMPKQAIVVIQQVGDTVLQTEWQGLIRVQDV 128
Query: 118 RATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
RATE DKV ++ SF+PGDIVRA V+SLGD Y+LSTA N+LGV+ A S AG + IS
Sbjct: 129 RATEKDKVKIYESFKPGDIVRAQVISLGDQANYYLSTASNELGVILATSEAGNDMVPIS 187
>gi|417396863|gb|JAA45465.1| Putative exosome complex component csl4-like protein [Desmodus
rotundus]
Length = 195
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G + S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCVTKSS----ENGALPVVSVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|452985490|gb|EME85247.1| hypothetical protein MYCFIDRAFT_46706 [Pseudocercospora fijiensis
CIRAD86]
Length = 197
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 99/175 (56%), Gaps = 16/175 (9%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PG+ LG T G+ ++ K+N + AS+ G + + P + PT+ + H+ GP
Sbjct: 7 PGQSLGPNTSNNLGEATHIHKNN--LCASIAGPIHS-KPSTSKTSKAPTLSI--HRTTGP 61
Query: 73 V-PEPGSVVIARVTKVMTRMASA----------DIMCVGAKSVREKFSGIIRQQDVRATE 121
+ P G+ ++ R+TK TR A+ D ++ + IRQQD+RATE
Sbjct: 62 LLPSVGTKILGRITKTQTRQANISILTIISSSPDETTTTHHNLNDPLPATIRQQDIRATE 121
Query: 122 IDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
ID+V + SFR GDIVRA V+SLGD RAY+LSTAKN+LGVV A S G + +S
Sbjct: 122 IDQVKVSESFRVGDIVRAVVISLGDERAYYLSTAKNELGVVMATSEFGNPMVPVS 176
>gi|367025787|ref|XP_003662178.1| hypothetical protein MYCTH_2302465 [Myceliophthora thermophila ATCC
42464]
gi|347009446|gb|AEO56933.1| hypothetical protein MYCTH_2302465 [Myceliophthora thermophila ATCC
42464]
Length = 240
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 104/207 (50%), Gaps = 45/207 (21%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSP--------------PPDSPDQ 58
PG++LG A+ + G G ++ H +YASL G + P P +P +
Sbjct: 11 PGQLLGPASRYQPGPGTHL--HGANLYASLLGQVHVSQPARAPGPAKRLTKITPAPAPAE 68
Query: 59 RPTVEVTGHK-----------------------------AHGPVPEPGSVVIARVTKVMT 89
PT+ V+ + +PE G+VV+ RV ++
Sbjct: 69 LPTISVSAPRLSSSSSSRVGGGAAAAAGCGAEGEGRRKMKREVLPEVGNVVLCRVLRITP 128
Query: 90 RMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARA 149
R A I+ G + ++ G+IR QDVRATE D+V ++ SFRPGDIVRA V+SLGD
Sbjct: 129 RQAVVAILVCGDTVLDAEWQGLIRVQDVRATEKDRVKIYESFRPGDIVRAEVISLGDQTN 188
Query: 150 YFLSTAKNDLGVVSAESTAGKLVYCIS 176
Y+LSTAKN+LGVV A S AG + +S
Sbjct: 189 YYLSTAKNELGVVLAVSEAGNTMQPVS 215
>gi|302911154|ref|XP_003050430.1| hypothetical protein NECHADRAFT_96196 [Nectria haematococca mpVI
77-13-4]
gi|256731367|gb|EEU44717.1| hypothetical protein NECHADRAFT_96196 [Nectria haematococca mpVI
77-13-4]
Length = 208
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 106/181 (58%), Gaps = 16/181 (8%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDS-PDQR------PTV 62
+ PG+VLG T+ G G +V + G V +SL G + + P + P +R PT
Sbjct: 9 IAMPGKVLGPVTKFAPGPGTHV--YEGNVVSSLLGKVTVIQPAKAAGPAKRLNKITAPTT 66
Query: 63 E------VTGH-KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQ 115
E V+ H + +P+ ++V+ARV ++M + A I VG + ++ G+IR Q
Sbjct: 67 EELATVSVSRHGRKREVLPDVDNIVLARVLRLMPKQAIVVIQQVGDTVLETEWQGVIRVQ 126
Query: 116 DVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCI 175
DVRATE DKV ++ SF+PGDIVRA V+SLGD Y+LSTA N+LGVV A S AG + +
Sbjct: 127 DVRATEKDKVKIYESFKPGDIVRAQVISLGDQANYYLSTASNELGVVMAMSEAGNDMVPL 186
Query: 176 S 176
S
Sbjct: 187 S 187
>gi|297687146|ref|XP_002821091.1| PREDICTED: exosome complex component CSL4 [Pongo abelii]
Length = 195
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 93/158 (58%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLMKSS----ENGALPVVSVVRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGD ++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDTQSNYLLTTAENELGVVVAHSESG 161
>gi|194332723|ref|NP_001123851.1| exosome component 1 [Xenopus (Silurana) tropicalis]
gi|189441871|gb|AAI67725.1| LOC100170616 protein [Xenopus (Silurana) tropicalis]
Length = 194
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 97/170 (57%), Gaps = 7/170 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L + G G + +G ++ASL G + + P + V
Sbjct: 9 PGERLCSTEDCAPGYGTFC--RHGYIFASLAGYIVKKT----DNGLMPVISVVRETDSHL 62
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ GSVV +VT + +R A IM +G+ + F G IR++D+RATE DKV+++ SFR
Sbjct: 63 LPDVGSVVTCKVTSINSRFAKVQIMYIGSTPLSNTFRGTIRKEDIRATEKDKVEVYKSFR 122
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
PGDIV A V+SLGD ++ Y LSTA+N+LGVV A S AG + IS ++
Sbjct: 123 PGDIVMAKVISLGDIQSNYLLSTAENELGVVVAHSEAGATMVPISWCEMQ 172
>gi|358401392|gb|EHK50698.1| hypothetical protein TRIATDRAFT_279999 [Trichoderma atroviride IMI
206040]
Length = 208
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 104/181 (57%), Gaps = 16/181 (8%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPP-DSPDQR------PTV 62
L PG +LG A + +G G ++ + G + +SL G + +P P +R P+V
Sbjct: 9 LAIPGTILGPAGKYVSGPGTHI--YGGNIVSSLLGNVNVTAPAKAPGPTKRLNKITAPSV 66
Query: 63 E-------VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQ 115
E + + +P+ G+ V+ARV ++M + A I VG ++ ++ G+IR Q
Sbjct: 67 EELSTISVIRRGRKREVLPDVGNTVLARVVRLMPKQAIVVIQQVGDTVLQTEWQGVIRVQ 126
Query: 116 DVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCI 175
DVRATE DKV +H SF+PGDIVRA V+SLGD Y+LSTA N+LGV+ A S G + I
Sbjct: 127 DVRATEQDKVKIHESFKPGDIVRAQVISLGDQANYYLSTASNELGVIMATSDVGNDMVPI 186
Query: 176 S 176
+
Sbjct: 187 N 187
>gi|332018459|gb|EGI59049.1| 3'-5' exoribonuclease CSL4-like protein [Acromyrmex echinatior]
Length = 200
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 100/174 (57%), Gaps = 8/174 (4%)
Query: 4 KEEEMVLVTPGEVLGKATEVK-AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTV 62
++EE+V+ PG+ L A + AG G Y + G +Y+ L G+++ ++ D+ TV
Sbjct: 3 EQEELVICVPGQRLCVADKSNVAGAGTY--EQQGYIYSKLAGIVKLVTD-----DKTRTV 55
Query: 63 EVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
EV VP PG +V A VT V R I CVG + + GI+R++DVRA +
Sbjct: 56 EVHSITEQSIVPAPGDIVTAIVTVVNQRFCKCSIKCVGDIILTRPYRGILRKEDVRAIDK 115
Query: 123 DKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
DK++M+ +RPGDI+ A V+ + + Y LSTA+N+LGVV A S G ++ IS
Sbjct: 116 DKLEMYKCYRPGDIILARVMPMTEIHTYQLSTAENELGVVIAHSDEGVVMVPIS 169
>gi|407922424|gb|EKG15523.1| hypothetical protein MPH_07263 [Macrophomina phaseolina MS6]
Length = 209
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 103/186 (55%), Gaps = 22/186 (11%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPD------------ 57
L PG+ LG +++ G G ++ H+ + ASL G + P +
Sbjct: 6 LALPGQPLGASSKYAPGPGVHI--HDAQLCASLLGPVSETKPLKRAAAGASTTTSSISAL 63
Query: 58 --QRPTVEVTGHK-----AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSG 110
RP+ + TG A +PE S+V+ARVT++ R A+ +I+ VG RE F G
Sbjct: 64 SIARPSAQ-TGSAYASIGASNILPEVDSIVLARVTRLTPRQATVEILVVGETVCREGFQG 122
Query: 111 IIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
IIR++DVRATE D+V + FR GDIVR V+SLGD Y+LSTA N+LGVV A+S A
Sbjct: 123 IIRREDVRATEKDRVKIGDMFRVGDIVRGVVISLGDQSNYYLSTATNELGVVMAKSEAEN 182
Query: 171 LVYCIS 176
+Y IS
Sbjct: 183 QMYPIS 188
>gi|432113107|gb|ELK35685.1| Exosome complex component CSL4 [Myotis davidii]
Length = 195
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 93/158 (58%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G + P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCMTKSC----ENGALPVVSVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|431838940|gb|ELK00869.1| 3'-5' exoribonuclease CSL4 like protein [Pteropus alecto]
Length = 195
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 93/158 (58%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G + S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCMTKSS----ENGALPVVSVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+T +N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTGENELGVVVAHSESG 161
>gi|169614391|ref|XP_001800612.1| hypothetical protein SNOG_10336 [Phaeosphaeria nodorum SN15]
gi|111061551|gb|EAT82671.1| hypothetical protein SNOG_10336 [Phaeosphaeria nodorum SN15]
Length = 213
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 26/190 (13%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGL----------------------LR 47
L PG++LG + G G ++ H +YAS+ G L
Sbjct: 6 LALPGQLLGPTDKYLPGPGTHI--HEQQIYASIAGPVVSSPSRASQTAATASKSKLVPLL 63
Query: 48 TLSPPPDSPDQRPTVEVTGHKAHGPV-PEPGSVVIARVTKVMTRMASADIMCVGAKSVRE 106
++S PP++ P + TG P+ PE S V+AR+T++ R A+ +I+ +G RE
Sbjct: 64 SISRPPNTTSD-PGILGTGSGGGAPILPEVDSTVLARITRLGARFATCEILVIGDTVCRE 122
Query: 107 KFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAES 166
F G IR++D+RATE DK+ + SFR GD++R V+SLGD Y+++T +N+ GVV A S
Sbjct: 123 AFQGQIRREDIRATEKDKIKIEESFRVGDLIRGVVISLGDQSNYYVATDRNEFGVVMARS 182
Query: 167 TAGKLVYCIS 176
G+L+Y +S
Sbjct: 183 EEGRLMYPVS 192
>gi|396477146|ref|XP_003840207.1| similar to exosome complex subunit Csl4 [Leptosphaeria maculans
JN3]
gi|312216778|emb|CBX96728.1| similar to exosome complex subunit Csl4 [Leptosphaeria maculans
JN3]
Length = 212
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 105/194 (54%), Gaps = 35/194 (18%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
L PG++LG + G G ++ + N +YAS+ G + + SPP +P PT + KA
Sbjct: 6 LALPGQLLGHTDKYLPGPGTHIHESN--IYASIAGPVLS-SPPSHNP---PTP--SSSKA 57
Query: 70 HG----------PVPEPG-----------------SVVIARVTKVMTRMASADIMCVGAK 102
H P PG S+V+ R+T++ R A+ DI+ +
Sbjct: 58 HPTPLLSVARPPPTSSPGILGPSSGGGTALLPTISSIVLCRITRLGPRFATCDILVIDDV 117
Query: 103 SVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVV 162
RE F G IR++D+RATE DK+ M SFR GD+VR V+SLGD Y+++T +N+LGVV
Sbjct: 118 VCREAFQGQIRREDIRATEKDKIKMEESFRVGDLVRGVVISLGDQSNYYVATERNELGVV 177
Query: 163 SAESTAGKLVYCIS 176
A S G+L+Y +S
Sbjct: 178 LARSEEGRLMYPVS 191
>gi|19076010|ref|NP_588510.1| exosome subunit Csl4 (predicted) [Schizosaccharomyces pombe 972h-]
gi|28380026|sp|O59821.2|CSL4_SCHPO RecName: Full=Exosome complex component csl4
gi|3395592|emb|CAA20134.1| exosome subunit Csl4 (predicted) [Schizosaccharomyces pombe]
Length = 181
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 95/160 (59%), Gaps = 12/160 (7%)
Query: 8 MVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGH 67
M LV PG+V+ + A G K + ++ TG+ P +S VE T
Sbjct: 1 MNLVLPGQVVARG----APNGEGTVKRGDYIISTRTGIF---DPEKNSVTYPRKVEETA- 52
Query: 68 KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDM 127
+P GS+V+ARV+++ R A+ +I V +++F G+I QD+RATE +KV +
Sbjct: 53 ----VLPNVGSIVLARVSRINARQATVNISVVDDVCTKDEFQGVIHVQDIRATEKNKVKV 108
Query: 128 HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAEST 167
SFRPGDIVRA V+SLGD +YFL+TA+NDLGV+ A+S+
Sbjct: 109 QNSFRPGDIVRALVISLGDGSSYFLTTARNDLGVIFAQSS 148
>gi|322789867|gb|EFZ15014.1| hypothetical protein SINV_14459 [Solenopsis invicta]
Length = 217
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 100/177 (56%), Gaps = 8/177 (4%)
Query: 1 MVVKEEEMVLVTPGEVLGKATEVK-AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQR 59
++ ++EE ++ PG+ L + + AG G Y + G +Y+ L G+++ ++ D+
Sbjct: 13 IMTEKEEFIICVPGQRLCVSDKSNVAGPGTY--EQQGYIYSKLAGIVKLVTN-----DKI 65
Query: 60 PTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRA 119
VEV VP PG +V A VT V R I CVG + + GI+R++DVRA
Sbjct: 66 RKVEVHSMTEQSTVPAPGDIVTAMVTVVNQRFCKCSIKCVGDIVLTRPYRGILRKEDVRA 125
Query: 120 TEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
+ DK++M+ +RPGDI+ A V+ + + Y LSTA+N+LGVV A S G ++ IS
Sbjct: 126 IDKDKIEMYKCYRPGDIILARVMPMTEMHTYQLSTAENELGVVIAHSDEGAVMIPIS 182
>gi|348673547|gb|EGZ13366.1| hypothetical protein PHYSODRAFT_510564 [Phytophthora sojae]
Length = 168
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 87/151 (57%), Gaps = 9/151 (5%)
Query: 13 PGEVLGKAT-EVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHG 71
PG+ L A ++KAG GAYV +G +YAS+ G R S D A
Sbjct: 10 PGQRLAAADGKLKAGSGAYV--RDGAIYASICGKWRI------SQDVVEVSRAGKTVASA 61
Query: 72 PVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSF 131
V G VVI RV K+M+R DI+CVG ++E F G IR +DVR +IDK+ M F
Sbjct: 62 QVLRLGDVVICRVAKIMSRQVMVDILCVGETVLKEAFPGTIRLEDVRNHDIDKLVMEEVF 121
Query: 132 RPGDIVRASVLSLGDARAYFLSTAKNDLGVV 162
PG +V+A+VLS GD R+YFLSTAK LGVV
Sbjct: 122 SPGMLVKAAVLSFGDTRSYFLSTAKPGLGVV 152
>gi|46125893|ref|XP_387500.1| hypothetical protein FG07324.1 [Gibberella zeae PH-1]
Length = 603
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 105/179 (58%), Gaps = 18/179 (10%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSP--------------DQ 58
PG+VLG T+ G G + + G V +SL G + T++P P ++
Sbjct: 12 PGKVLGPVTKFAPGAGTHA--YEGNVVSSLLGQV-TVTPAAKGPGPQKRLNKITAPTSEE 68
Query: 59 RPTVEVTGH-KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDV 117
T+ V+ H + +P+ ++V+ARV ++M + A I VG ++ ++ G+IR QDV
Sbjct: 69 LATISVSRHGRKREILPDVDNIVLARVLRLMPKQAIVVIQQVGDTVLQTEWQGLIRVQDV 128
Query: 118 RATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
RATE DKV ++ SF+PGDIVRA V+SLGD Y+LSTA N+LGV+ A S AG + IS
Sbjct: 129 RATEKDKVKIYESFKPGDIVRAQVISLGDQANYYLSTASNELGVILATSEAGNDMVPIS 187
>gi|307203861|gb|EFN82797.1| 3'-5' exoribonuclease CSL4-like protein [Harpegnathos saltator]
Length = 197
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 95/167 (56%), Gaps = 8/167 (4%)
Query: 4 KEEEMVLVTPGEVLGKATEVK-AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTV 62
+ EE+++ PG+ L ++ AG G Y + G +Y+ L G+++ ++ D+ +
Sbjct: 3 ENEELIICVPGQRLCVCDKINIAGPGTY--EQQGYIYSKLAGIVKL-----ETNDKTRII 55
Query: 63 EVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
+V G +P PG +V A V V R I CVG + + GI+R++DVRA +
Sbjct: 56 QVHGITEQSIIPTPGDIVTAMVILVNQRFCKCSIKCVGDIVLTRPYRGILRKEDVRAHDK 115
Query: 123 DKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
DK+DM+ S+R GDI+ A V+ + +A Y LSTA+N+LGVV A S G
Sbjct: 116 DKIDMYKSYRAGDIILARVMPMTEAHTYQLSTAENELGVVIAHSEEG 162
>gi|332212464|ref|XP_003255339.1| PREDICTED: exosome complex component CSL4 [Nomascus leucogenys]
Length = 195
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 93/158 (58%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLMKSS----ENGALPVVSVVRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++DVRATE KV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKYKVEIYKSFR 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 161
>gi|66525811|ref|XP_624453.1| PREDICTED: 3'-5' exoribonuclease CSL4 homolog [Apis mellifera]
Length = 198
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 93/167 (55%), Gaps = 8/167 (4%)
Query: 4 KEEEMVLVTPGEVLGKATEVK-AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTV 62
K +++++ PG+ L + +V AG G Y + G +Y+ L GL++ + + TV
Sbjct: 3 KNKDIIVCVPGQRLCISDKVNIAGPGTY--EQQGYIYSKLAGLVKLVEK-----ENTRTV 55
Query: 63 EVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
EV G VP PG +V A VT V R I C+G + + GI+R++DVRA +
Sbjct: 56 EVHGITEQSIVPAPGDIVTAMVTIVNQRFCKCSIKCIGDIVLTRPYRGILRKEDVRAIDK 115
Query: 123 DKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
D + M+ FRPGDI+ A V+ + + Y LSTA+N+LGVV A S G
Sbjct: 116 DNIQMYKCFRPGDIILARVMPMTEGHTYQLSTAENELGVVIAHSEEG 162
>gi|330800727|ref|XP_003288385.1| hypothetical protein DICPUDRAFT_33962 [Dictyostelium purpureum]
gi|325081567|gb|EGC35078.1| hypothetical protein DICPUDRAFT_33962 [Dictyostelium purpureum]
Length = 157
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 89/153 (58%), Gaps = 18/153 (11%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSP------------- 56
++TPG+ L K +E + +G Y H G +Y+S+ G + + P
Sbjct: 5 VITPGQRLAKDSEYISSEGTYT--HKGYIYSSVLGFQHIIKKNLNKPTSEEINNSNNSNV 62
Query: 57 ---DQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIR 113
D R + V K VPE GS+V +V ++ ++AS I+CVG K+++E F+GIIR
Sbjct: 63 NNSDDRDFIVVLKEKEPSVVPEIGSIVTVQVLRINPKLASVAILCVGTKALKETFNGIIR 122
Query: 114 QQDVRATEIDKVDMHLSFRPGDIVRASVLSLGD 146
QDVRATEIDKV+++ SFRPGDIV A ++++ +
Sbjct: 123 IQDVRATEIDKVEIYKSFRPGDIVLAQIVNISN 155
>gi|380024377|ref|XP_003695976.1| PREDICTED: exosome complex component CSL4-like [Apis florea]
Length = 197
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 8/167 (4%)
Query: 4 KEEEMVLVTPGEVLGKATEVK-AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTV 62
K +++++ PG+ L + +V AG G Y + G +Y+ L GL++ + + T+
Sbjct: 3 KNKDIIVCVPGQRLCISDKVNIAGPGTY--EQQGYIYSKLAGLVKLVEK-----ENTRTI 55
Query: 63 EVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
EV G VP PG +V A VT V R I C+G + + GI+R++DVRA +
Sbjct: 56 EVHGITEQSIVPAPGDIVTAMVTIVNQRFCKCSIKCIGDIVLTRPYRGILRKEDVRAIDK 115
Query: 123 DKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
D + M+ FRPGDI+ A V+ + + Y LSTA+N+LGVV A S G
Sbjct: 116 DNIQMYKCFRPGDIILARVMPMTEGHTYQLSTAENELGVVIAHSEEG 162
>gi|427782871|gb|JAA56887.1| Putative exosomal 3'-5' exoribonuclease complex subunit ski4 csl4
[Rhipicephalus pulchellus]
Length = 186
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 85/141 (60%), Gaps = 9/141 (6%)
Query: 25 AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA-HGPVPEPGSVVIAR 83
G G YV NG VY+SL GL++ L D++ VEV H+ VP PG++V +
Sbjct: 18 GGDGTYV--QNGYVYSSLAGLIKILR----QKDKKTLVEV--HRCTRQNVPAPGNIVTVK 69
Query: 84 VTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLS 143
+T V R I+ + + E F GIIR++DVR E D V++H FR GDIV A V+S
Sbjct: 70 ITGVTHRFCKCSIIAIEDCELCEPFRGIIRKEDVREFEKDTVEIHKCFRTGDIVLARVIS 129
Query: 144 LGDARAYFLSTAKNDLGVVSA 164
LGDA +Y+LSTA+N LGVV A
Sbjct: 130 LGDALSYYLSTAENKLGVVVA 150
>gi|327288885|ref|XP_003229155.1| PREDICTED: 3'-5' exoribonuclease CSL4 homolog [Anolis carolinensis]
Length = 194
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 92/158 (58%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G ++ASL G L S P + V
Sbjct: 9 PGERLCSLEEGVPGSGTYT--RHGFIFASLAGCLVRKS----ENGTLPVISVMRDVESQL 62
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G+ V +V + +R A I+ VG+ ++ F G IR++D+RATE DKV+++ SFR
Sbjct: 63 LPDVGATVTCKVCSINSRFAKVHILYVGSSPLKTPFRGTIRREDIRATEKDKVEVYKSFR 122
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S AG
Sbjct: 123 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAG 160
>gi|383851800|ref|XP_003701419.1| PREDICTED: exosome complex component CSL4-like [Megachile
rotundata]
Length = 212
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 8/166 (4%)
Query: 5 EEEMVLVTPGEVLGKATEVK-AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVE 63
E+++++ PG+ L + +V AG G Y + G +Y+ L G+++ + + T+E
Sbjct: 18 EKDVIVCVPGQRLCVSDKVNIAGTGTY--EQQGYIYSKLAGVVKLVQE-----ENTRTIE 70
Query: 64 VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
V G VP PG +V A VT V R I C+G + + GI+R++DVRA +
Sbjct: 71 VHGITEQSIVPAPGDIVTAMVTVVNQRFCKCSIKCIGDIVLTRPYRGILRKEDVRALDKS 130
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
+ M+ SFRPGDI+ A V+ + +A Y LSTA+N+LGVV A S G
Sbjct: 131 NIQMYKSFRPGDIILARVMPMTEAHTYQLSTAENELGVVIAHSEEG 176
>gi|350424034|ref|XP_003493668.1| PREDICTED: exosome complex component CSL4-like [Bombus impatiens]
Length = 198
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 94/167 (56%), Gaps = 8/167 (4%)
Query: 4 KEEEMVLVTPGEVLGKATEVK-AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTV 62
K++++++ PG+ L + + AG G Y + G +Y+ L G+++ + + T+
Sbjct: 3 KDKDIIVCVPGQRLCISDKFNIAGPGTY--EQQGYIYSKLVGVVKLIQK-----ENTRTI 55
Query: 63 EVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
EV G VP PG +V A VT V R I C+G + + GI+R++DVRA +
Sbjct: 56 EVHGITEQSIVPAPGDIVTAMVTIVNQRFCKCSIKCIGDIVLTRPYRGILRKEDVRAIDK 115
Query: 123 DKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
D + M+ FRPGDI+ A V+ + +A Y LSTA+N+LGVV A S G
Sbjct: 116 DNIQMYKCFRPGDIILARVMPMTEAHTYQLSTAENELGVVIAHSEEG 162
>gi|443699200|gb|ELT98810.1| hypothetical protein CAPTEDRAFT_21100 [Capitella teleta]
Length = 202
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 94/162 (58%), Gaps = 8/162 (4%)
Query: 10 LVTPGEVLGKATEV-KAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTG-H 67
+ PG+ L A + + G G + G +Y+SL G + + PD + V+VT
Sbjct: 6 ICVPGDRLCIADDTHQNGVGTFTVA--GFIYSSLAGFRQDVL----LPDGKIQVKVTSCS 59
Query: 68 KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDM 127
K G VPE GS+V AR+ + R I+ V + E F G IR++D+RATE DKV++
Sbjct: 60 KTQGTVPEVGSLVTARILSMNPRFCKCSILSVDGIVLHEAFRGTIRREDIRATEKDKVEV 119
Query: 128 HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
+ SFRPGDI+ A VL +G+ Y L+TA+N+LGVV A S AG
Sbjct: 120 YKSFRPGDIILAKVLMIGEGLMYLLTTAENELGVVVATSEAG 161
>gi|312380167|gb|EFR26245.1| hypothetical protein AND_07831 [Anopheles darlingi]
Length = 214
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 8/166 (4%)
Query: 6 EEMVLVTPGEVLGKATEVK-AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV 64
E+ ++ PG+VL +E A +G Y + G ++A+L G+++ ++ + V
Sbjct: 7 EQTLICVPGQVLCAISEFTVASEGTY--EKLGYIHAALAGIVKL-----KKREKNTFISV 59
Query: 65 TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDK 124
VP G +V R+T V RMA I+C+G ++ + GIIR++DVRATEID+
Sbjct: 60 ISFGGGSTVPVIGDIVTTRITAVHHRMAKCRILCIGKTALNRPYRGIIRKEDVRATEIDR 119
Query: 125 VDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
V++H FRPGDIV A VL + + LSTA N+LGVV A S + +
Sbjct: 120 VELHKCFRPGDIVLARVLHQIELNVFHLSTADNELGVVVAISPSSR 165
>gi|387015836|gb|AFJ50037.1| 3'-5' exoribonuclease CSL4-like protein [Crotalus adamanteus]
Length = 194
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 92/158 (58%), Gaps = 7/158 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G ++ASL G S P + V
Sbjct: 9 PGERLCSLEEGTPGNGTYT--RHGSIFASLAGRFVKKS----ENGTLPVISVMRDVESQL 62
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V + +R A I+ VG+ ++ F G IR++D+RATE DK++++ SFR
Sbjct: 63 LPDVGAIVTCKVCSINSRFAKVHILYVGSTPLKSPFRGTIRREDIRATEKDKIEVYKSFR 122
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S AG
Sbjct: 123 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAG 160
>gi|401405869|ref|XP_003882384.1| 3'-5' exoribonuclease CSL4, related [Neospora caninum Liverpool]
gi|325116799|emb|CBZ52352.1| 3'-5' exoribonuclease CSL4, related [Neospora caninum Liverpool]
Length = 271
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 88/171 (51%), Gaps = 15/171 (8%)
Query: 12 TPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHG 71
TPGE LG +E G+G YV + +YA++ GL P P P A
Sbjct: 72 TPGERLGSTSEFAPGRGTYV--KDDFIYAAIVGLEHVGPPSPRPPTSAEGTREESKAAGL 129
Query: 72 PV-------------PEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVR 118
PV P G V+A+VTK+ I+ V +++ E F G IR QD+R
Sbjct: 130 PVLSVVSSAKCAAVLPTTGCFVLAQVTKISHHRVDCSILAVDGQTLAEPFRGFIRSQDIR 189
Query: 119 ATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
T++D VD+ ++PGD+VRA V+S+GD R Y LSTA +LGV+ A+ G
Sbjct: 190 ETDVDSVDVLECYKPGDVVRAKVISVGDGRCYVLSTASAELGVLFAQGKDG 240
>gi|340726414|ref|XP_003401553.1| PREDICTED: exosome complex component CSL4-like [Bombus terrestris]
Length = 198
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 8/167 (4%)
Query: 4 KEEEMVLVTPGEVLGKATEVK-AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTV 62
K++++++ PG+ L + + AG G Y + G +Y+ L G+++ + + T+
Sbjct: 3 KDKDIIVCVPGQRLCVSDKFNIAGPGTY--EQQGYIYSKLVGVVKLIQK-----ENIRTI 55
Query: 63 EVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
EV G VP PG +V A VT V R I C+G + + GI+R++DVR +
Sbjct: 56 EVHGITEQSIVPAPGDIVTAMVTIVNQRFCKCSIKCIGDIVLTRPYRGILRKEDVRVIDK 115
Query: 123 DKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
D + M+ FRPGDI+ A V+ + +A Y LSTA+N+LGVV A S G
Sbjct: 116 DNIQMYKCFRPGDIILARVMPMTEAHTYQLSTAENELGVVIAHSEEG 162
>gi|225717872|gb|ACO14782.1| 3-5 exoribonuclease CSL4 homolog [Caligus clemensi]
Length = 210
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 95/169 (56%), Gaps = 11/169 (6%)
Query: 10 LVTPGEVLGKATEVKA-GKGAYVAKHNGLVYASLTGLLRTLSPPPD------SPDQRPTV 62
LV PG L A E G G Y NG +Y+SL G ++ L D S + R TV
Sbjct: 6 LVVPGMRLCVADENNVPGPGTY--SQNGYIYSSLAGTMKLLRDKKDVSKSGSSSEVRITV 63
Query: 63 EVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V +P G +V RV V R A I+CV + E F G+IR++DVRATE
Sbjct: 64 -VPPCSGLSDIPSLGDIVTVRVIVVNPRFAKVQILCVRDSPLSEPFRGLIRKEDVRATEK 122
Query: 123 DKVDMHLSFRPGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAGK 170
DKV+++ SFR GDIV + V+SLG+A + Y LSTA+N+LGVV A S+ K
Sbjct: 123 DKVELYESFRAGDIVLSRVISLGEASSGYLLSTAENELGVVIANSSFDK 171
>gi|225719628|gb|ACO15660.1| 3-5 exoribonuclease CSL4 homolog [Caligus clemensi]
Length = 210
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 95/169 (56%), Gaps = 11/169 (6%)
Query: 10 LVTPGEVLGKATEVKA-GKGAYVAKHNGLVYASLTGLLRTLSPPPD------SPDQRPTV 62
LV PG L A E G G Y NG +Y+SL G ++ L D S + R TV
Sbjct: 6 LVVPGMRLCVADEDNVPGPGTY--SQNGYIYSSLAGTMKLLRDKKDVSKSGSSSEVRITV 63
Query: 63 EVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V +P G +V RV V R A I+CV + E F G+IR++DVRATE
Sbjct: 64 -VPPCSGLSDIPSLGDIVTVRVIVVNPRFAKVQILCVRDSPLSEPFWGLIRKEDVRATEK 122
Query: 123 DKVDMHLSFRPGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAGK 170
DKV+++ SFR GDIV + V+SLG+A + Y LSTA+N+LGVV A S+ K
Sbjct: 123 DKVELYKSFRAGDIVLSRVISLGEASSGYLLSTAENELGVVIANSSFDK 171
>gi|307187351|gb|EFN72479.1| 3'-5' exoribonuclease CSL4-like protein [Camponotus floridanus]
Length = 233
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 85/145 (58%), Gaps = 6/145 (4%)
Query: 25 AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARV 84
AG G Y + G +Y+ L G+++ ++ + Q T+EV G VP PG +V A V
Sbjct: 56 AGPGTY--EQQGYIYSKLAGIVKLIT----NEKQTRTIEVQGITEQSIVPAPGDIVTAIV 109
Query: 85 TKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSL 144
T V R I CVG + + GI+R++DVRA + D+++M+ +RPGDI+ A V+ +
Sbjct: 110 TLVNQRFCKCSIKCVGDIVLTRPYRGILRKEDVRAIDKDRLEMYKCYRPGDIILARVMPM 169
Query: 145 GDARAYFLSTAKNDLGVVSAESTAG 169
+A Y LSTA+N+LGVV A S G
Sbjct: 170 TEAHTYQLSTAENELGVVIAHSEEG 194
>gi|442761047|gb|JAA72682.1| Putative exosomal 3'-5' exoribonuclease complex subunit ski4,
partial [Ixodes ricinus]
Length = 240
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 90/164 (54%), Gaps = 8/164 (4%)
Query: 5 EEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV 64
E MV V + GKG YV +G +Y+SL G T+ D + V+V
Sbjct: 53 ESLMVTVRRQRLCAAGDSFIGGKGTYV--QHGYIYSSLAGRF-TIERQKD----KKIVQV 105
Query: 65 TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDK 124
VP PG++V A++T V R I+ + + E F GIIR++DV TE DK
Sbjct: 106 Q-RSMDKNVPTPGNIVTAKITAVTHRFCKCSIIAIEDCELWEPFRGIIRKEDVHETEKDK 164
Query: 125 VDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTA 168
V+MH SFR GDIV A V+S+GDA Y+L+TA+N LGVV A S +
Sbjct: 165 VEMHKSFRMGDIVLARVMSIGDALFYYLTTAENMLGVVVALSAS 208
>gi|290992701|ref|XP_002678972.1| predicted protein [Naegleria gruberi]
gi|284092587|gb|EFC46228.1| predicted protein [Naegleria gruberi]
Length = 216
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 100/184 (54%), Gaps = 23/184 (12%)
Query: 6 EEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQR------ 59
E V PG+ +G+ ++G+G YV + ++AS+ G ++ +S D +
Sbjct: 8 ETQQRVVPGQRIGQTDTYQSGRGTYVKDNR--IHASVVGSVK-ISNHADIDESTPSSSNN 64
Query: 60 ----------PTVEVTGHKAHGP-VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREK- 107
P + V VP SVV A+V K A DI+CV K V +
Sbjct: 65 SSSTSEVASLPYIHVIQENNQETIVPNILSVVTAKVIKTTKSFAKVDILCVDGKPVTKSG 124
Query: 108 --FSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAE 165
SG++R QD+RATEIDKV ++ RPGDI+ A V+SLGD+R+Y++STA+N+LGV+ A
Sbjct: 125 SAISGLLRVQDIRATEIDKVVLYECLRPGDIILAEVISLGDSRSYYISTARNELGVIYAT 184
Query: 166 STAG 169
S+ G
Sbjct: 185 SSFG 188
>gi|390345698|ref|XP_784560.2| PREDICTED: exosome complex component CSL4-like [Strongylocentrotus
purpuratus]
Length = 162
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 75/110 (68%)
Query: 60 PTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRA 119
P + V + VP S+V +V + ++ DI+ V + + E F G+IR++D+RA
Sbjct: 17 PALTVLQQEIQITVPRQKSLVTCKVVSITSKFCRCDILSVESVPLTETFRGMIRKEDIRA 76
Query: 120 TEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
TE DKV+++ SFRPGDIV A VLSLGDA++Y L+TA+N+LGVV A+S AG
Sbjct: 77 TEKDKVEVYKSFRPGDIVLARVLSLGDAQSYLLTTAENELGVVLAKSEAG 126
>gi|91084271|ref|XP_971155.1| PREDICTED: similar to Csl4 CG6249-PA [Tribolium castaneum]
gi|270008798|gb|EFA05246.1| hypothetical protein TcasGA2_TC015397 [Tribolium castaneum]
Length = 196
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 94/157 (59%), Gaps = 7/157 (4%)
Query: 25 AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARV 84
+G+G Y + G +YA+L G++ + P D+ +EV VP G +V A++
Sbjct: 22 SGQGTY--ERGGYIYATLAGVVDIV--PKDNVQ---IIEVRSSGQETLVPSQGDIVTAQI 74
Query: 85 TKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSL 144
+ + I CVG K + ++ GI+R++DVRATE D+V+++ SFRPGD++ A VL +
Sbjct: 75 HTITQQFCKCYIKCVGDKVLGRQYRGILRKEDVRATEKDRVEIYKSFRPGDVILARVLPI 134
Query: 145 GDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
+A Y LSTA+N+LGVV+A S G L+ +S ++
Sbjct: 135 TEAHTYQLSTAENELGVVTAHSEHGGLMVPVSWTEMQ 171
>gi|430811801|emb|CCJ30726.1| unnamed protein product, partial [Pneumocystis jirovecii]
gi|430813990|emb|CCJ28713.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 254
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 94/170 (55%), Gaps = 13/170 (7%)
Query: 6 EEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG-LLRTLSPPPDSPDQRPT--- 61
E LV PG+ + G G + H + AS+ G ++++L DS Q
Sbjct: 90 ETGQLVLPGQPISPINAATGGPGTII--HTSFIRASIPGKIVQSL----DSNGQHQISVE 143
Query: 62 --VEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRA 119
+++ K +PE ++V+ RVTK+ + A+ +I VG + +F GIIR QDV+A
Sbjct: 144 RLLDMFHRKGSSILPEVNAIVLGRVTKIKPKEATVNIFVVGETVCQREFQGIIRIQDVKA 203
Query: 120 TEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
T D + ++ FRPGDIVRA + SLGD +Y+LSTAKNDLGVV A G
Sbjct: 204 TSKDTIKIYAFFRPGDIVRAQI-SLGDQSSYYLSTAKNDLGVVFATDITG 252
>gi|221483929|gb|EEE22233.1| 3'-5' exoribonuclease csl4, putative [Toxoplasma gondii GT1]
Length = 269
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 92/175 (52%), Gaps = 22/175 (12%)
Query: 12 TPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV--TGHKA 69
TPGE L +E G+G YV + +YA++ G+ + P +P +PT G K
Sbjct: 69 TPGERLSSTSEYACGRGTYV--KDDFIYAAVVGIEQIDHP---TPRGQPTTTEGRAGQKR 123
Query: 70 HG--PV-------------PEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQ 114
G PV P G V+A+VTKV I+ V ++ E F G IR
Sbjct: 124 AGGLPVLSVVPFAKSASVLPTTGCFVLAQVTKVARHRVECSILAVDGHTLAEPFRGFIRS 183
Query: 115 QDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
QD+R T++D VD+ F+PGD+VRA V+S+GD R Y LSTA +LGV+ A+ G
Sbjct: 184 QDIRETDVDSVDVLECFKPGDVVRAKVISMGDGRCYVLSTASAELGVLFAQGKEG 238
>gi|221505209|gb|EEE30863.1| 3'-5' exoribonuclease csl4, putative [Toxoplasma gondii VEG]
Length = 269
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 92/174 (52%), Gaps = 20/174 (11%)
Query: 12 TPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTG--HKA 69
TPGE L +E G+G YV + +YA++ G+ + P P Q T E G +A
Sbjct: 69 TPGERLSSTSEYACGRGTYV--KDDFIYAAVVGIEQIDHPTPRG--QPTTTEGRGGQKRA 124
Query: 70 HG-PV-------------PEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQ 115
G PV P G V+A+VTKV I+ V ++ E F G IR Q
Sbjct: 125 GGLPVLSVVPFAKSASVLPTTGCFVLAQVTKVARHRVECSILAVDGHTLAEPFRGFIRSQ 184
Query: 116 DVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
D+R T++D VD+ F+PGD+VRA V+S+GD R Y LSTA +LGV+ A+ G
Sbjct: 185 DIRETDVDSVDVLECFKPGDVVRAKVISMGDGRCYVLSTASAELGVLFAQGKEG 238
>gi|66809117|ref|XP_638281.1| hypothetical protein DDB_G0285377 [Dictyostelium discoideum AX4]
gi|60466712|gb|EAL64763.1| hypothetical protein DDB_G0285377 [Dictyostelium discoideum AX4]
Length = 156
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 89/150 (59%), Gaps = 17/150 (11%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQ----------- 58
++TPG+ L K ++ + +G YV H G +Y+S+ G + D+ ++
Sbjct: 9 IITPGQRLCKESDFISSEGTYV--HKGYIYSSVLGFKHVIKRNIDTTNENNVNNSNNSNE 66
Query: 59 ----RPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQ 114
+ + V K VPE GS+V +V ++ ++AS I+CVG K+++E F+GIIR
Sbjct: 67 IENNKDYIVVLKEKEPSVVPEIGSIVTVQVLRINPKLASVAILCVGTKALKETFNGIIRI 126
Query: 115 QDVRATEIDKVDMHLSFRPGDIVRASVLSL 144
QDVRATEIDKV+++ SFRPGDIV A ++ L
Sbjct: 127 QDVRATEIDKVEIYKSFRPGDIVLAQIVCL 156
>gi|116197969|ref|XP_001224796.1| hypothetical protein CHGG_07140 [Chaetomium globosum CBS 148.51]
gi|88178419|gb|EAQ85887.1| hypothetical protein CHGG_07140 [Chaetomium globosum CBS 148.51]
Length = 200
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 94/186 (50%), Gaps = 38/186 (20%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
L PG++LG A+ + G G ++ HN +YASL G + P P QR A
Sbjct: 11 LAIPGQLLGPASRYQPGPGTHL--HNANLYASLLGHVHITQPAQQPPRQR---------A 59
Query: 70 HGPVPEPGSVVIARVTKVMTRMASAD-------------------IMCVGAKSVREKFSG 110
GP R+TK+ A A I+ G + ++ G
Sbjct: 60 PGPA--------KRLTKITPAPAPAPTPPAERPTISVAVADAVVAILVCGDSVLEAEWQG 111
Query: 111 IIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
+IR QDVRATE D+V ++ SFRPGD+VRA V+SLGD Y+LST +N+LGVV A S AG
Sbjct: 112 LIRVQDVRATEKDRVRIYESFRPGDVVRAEVISLGDQANYYLSTTRNELGVVLAVSEAGN 171
Query: 171 LVYCIS 176
+ +S
Sbjct: 172 TMQPVS 177
>gi|237836691|ref|XP_002367643.1| 3'-5' exoribonuclease csl4, putative [Toxoplasma gondii ME49]
gi|211965307|gb|EEB00503.1| 3'-5' exoribonuclease csl4, putative [Toxoplasma gondii ME49]
Length = 269
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 92/174 (52%), Gaps = 20/174 (11%)
Query: 12 TPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTG--HKA 69
TPGE L +E G+G YV + +YA++ G+ + P P Q T+E G +A
Sbjct: 69 TPGERLSSTSEYACGRGTYV--KDDFIYAAVVGIEQIDHPTPRG--QPTTIEGRGGQKRA 124
Query: 70 HG-PV-------------PEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQ 115
G PV P G V+A+V KV I+ V ++ E F G IR Q
Sbjct: 125 GGLPVLSVVPFAKSASVLPTTGCFVLAQVAKVARHRVECSILAVDGHTLAEPFRGFIRSQ 184
Query: 116 DVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
D+R T++D VD+ F+PGD+VRA V+S+GD R Y LSTA +LGV+ A+ G
Sbjct: 185 DIRETDVDSVDVLECFKPGDVVRAKVISMGDGRCYVLSTASAELGVLFAQGKEG 238
>gi|241647943|ref|XP_002410000.1| exosomal 3'-5' exoribonuclease complex, subunit ski4, putative
[Ixodes scapularis]
gi|215501492|gb|EEC10986.1| exosomal 3'-5' exoribonuclease complex, subunit ski4, putative
[Ixodes scapularis]
Length = 186
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 85/144 (59%), Gaps = 8/144 (5%)
Query: 25 AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARV 84
GKG YV +G +Y+SL G T+ D + V+V VP PG++V A++
Sbjct: 19 GGKGTYV--QHGYIYSSLAGRF-TIERQKD----KKIVQVQ-RSMDKNVPTPGNIVTAKI 70
Query: 85 TKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSL 144
T V R I+ + + E F GIIR++DV TE DKV+MH SFR GDIV A V+S+
Sbjct: 71 TAVTHRFCKCSIIAIEDCELWEPFRGIIRKEDVHETEKDKVEMHKSFRMGDIVLARVMSI 130
Query: 145 GDARAYFLSTAKNDLGVVSAESTA 168
GDA Y+L+TA+N LGVV A S +
Sbjct: 131 GDALFYYLTTAENMLGVVVALSAS 154
>gi|395501798|ref|XP_003755277.1| PREDICTED: exosome complex component CSL4 [Sarcophilus harrisii]
Length = 307
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
Query: 52 PPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGI 111
P P P V VT +P+ G++V +V+ + +R A I+ VG+ ++ F G
Sbjct: 155 PRPKPAALPVVSVTRETESQMLPDVGTIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGT 214
Query: 112 IRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAGK 170
IR++DVRATE DKV+++ SFRPGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 215 IRKEDVRATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGV 274
Query: 171 LVYCISKYDLN 181
+ IS ++
Sbjct: 275 QMVPISWCEMQ 285
>gi|189199682|ref|XP_001936178.1| exosome component 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983277|gb|EDU48765.1| exosome component 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 211
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 26/186 (13%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGL---------------------LRTLSP 51
PG+ L K ++ G G ++ H +YAS+ GL L +++
Sbjct: 9 PGQFLAKTSDYLPGPGTHI--HESQIYASIAGLVISTPSSSTANTTSKSSNLTPLLSITR 66
Query: 52 PPDSPDQRPTVEVTGHKAHGPV-PEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSG 110
PP S D P + A P+ P S V+ R+T++ +R AS +I+ + RE F
Sbjct: 67 PPSSTD--PGILGPNSGAGIPLLPTVSSTVLVRITRLGSRFASCEILVIDNLVCREAFVA 124
Query: 111 IIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
IR++D+RATE DK+ + SFR GD+VR +V+SLGD+ Y+++T N+ GVV A S G+
Sbjct: 125 QIRREDIRATEKDKIKIEESFRVGDLVRGTVISLGDSGNYYVATDSNEYGVVLARSEEGR 184
Query: 171 LVYCIS 176
+++ +S
Sbjct: 185 IMHPVS 190
>gi|296420097|ref|XP_002839617.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635800|emb|CAZ83808.1| unnamed protein product [Tuber melanosporum]
Length = 206
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 96/181 (53%), Gaps = 25/181 (13%)
Query: 13 PGEVLGKATEVKAGKGAYVAKH--NGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAH 70
PG+ L ++ AG G Y ++ ++ AS+ G+ R + D+ +V VT
Sbjct: 13 PGQPLAQSPPYAAGPGTYTTQNPTRTVITASVAGIPRVHA------DK--SVSVTRPSPS 64
Query: 71 GPV---PEPGSVVIARVTKVMTRMASADIMCVGAKS------------VREKFSGIIRQQ 115
P+ PE S V+ARVT++ R A+ +I + F G+IR Q
Sbjct: 65 HPLLLLPEVASTVLARVTRLNPRQATVEIFAIQGGGDGIHGGGDGGCVCEHTFQGVIRAQ 124
Query: 116 DVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCI 175
DVRATE D++ M SFR GD+VRA V+SLGD Y+LSTA N LGVV A S AG ++ I
Sbjct: 125 DVRATEKDRIKMLESFRVGDVVRAVVISLGDQSNYYLSTASNSLGVVVAHSDAGDPLHPI 184
Query: 176 S 176
+
Sbjct: 185 N 185
>gi|301093486|ref|XP_002997589.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110552|gb|EEY68604.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 168
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 89/157 (56%), Gaps = 15/157 (9%)
Query: 10 LVTPGEVLGKA-TEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHK 68
+ PG+ L +++KAG G YV + +++AS+ G R + VEVT
Sbjct: 7 IAVPGQHLAAVDSKLKAGTGTYV--RDNVIFASIYGKWRV---------SQDVVEVTRAN 55
Query: 69 ---AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKV 125
A V G +VI RV K+ +R DI+CVG ++E F G IR +DVR +IDK+
Sbjct: 56 KTVASAQVLRLGDIVICRVVKITSRQVMVDILCVGETVLKEVFPGTIRLEDVRNHDIDKL 115
Query: 126 DMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVV 162
M F PG +V+A+VLS GD R+Y+LSTAK LGVV
Sbjct: 116 VMDEVFSPGMLVKATVLSFGDTRSYYLSTAKPGLGVV 152
>gi|358055298|dbj|GAA98685.1| hypothetical protein E5Q_05373 [Mixia osmundae IAM 14324]
Length = 189
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 15/172 (8%)
Query: 13 PGEVL-GKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHG 71
PG+ L G T++++G G Y G V ++L G +R S TV V G +A
Sbjct: 10 PGQQLTGAPTKLQSGDGTYT--RGGQVISALAGPVRHDSK---------TVSV-GREAQA 57
Query: 72 PV-PEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLS 130
+ PE G +VI VT++ A+ I VG++ G+IR QDVR D + + S
Sbjct: 58 TLLPEVGQIVIGTVTRIARAQATLAIQVVGSRLTVRDIQGVIRPQDVRLLAKDTLKIWHS 117
Query: 131 FRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAEST-AGKLVYCISKYDLN 181
FRPGD+VRA V+S GDAR+Y+LSTA+NDLGV+SA + G+ + IS ++
Sbjct: 118 FRPGDLVRAQVVSPGDARSYYLSTARNDLGVISASAEDTGEPLVAISWEEMQ 169
>gi|449302445|gb|EMC98454.1| hypothetical protein BAUCODRAFT_426426 [Baudoinia compniacensis
UAMH 10762]
Length = 197
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 98/175 (56%), Gaps = 18/175 (10%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PG LG G G ++ H ++AS+ G + T P + T A P
Sbjct: 9 PGHNLGPIASNNVGPGTHI--HCSHLFASIAGSVIT-----TPPPPKSKAAPTVSIAQPP 61
Query: 73 V-PEPGSVVIARVTKVMTRMASADIMCVGAKS---------VREKFSGIIRQQDVRATEI 122
+ PE G++V+ R+T+ R A+ I+ + + + E FS IIRQQD+R TEI
Sbjct: 62 LLPEVGTLVLGRITRTNPRQANLSILALYPSASAATTDPVPLAEPFSAIIRQQDIRLTEI 121
Query: 123 DKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTA-GKLVYCIS 176
DKV + SFR GDIVRA V+SLGD R+Y+ STAKN+LGVV A S A G+ ++ +S
Sbjct: 122 DKVKVAESFRVGDIVRAVVISLGDERSYYASTAKNELGVVMAWSEASGEAMWPVS 176
>gi|225711060|gb|ACO11376.1| 3-5 exoribonuclease CSL4 homolog [Caligus rogercresseyi]
Length = 220
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 96/169 (56%), Gaps = 11/169 (6%)
Query: 10 LVTPGEVLGKATEVK-AGKGAYVAKHNGLVYASLTGLLRTLSPPP------DSPDQRPTV 62
+V PG L A E +G G Y NG +Y+SL+G +R L + R TV
Sbjct: 6 IVVPGMRLCVADENNVSGPGTY--SQNGYIYSSLSGTMRLLREKKKKEKDMSKSEVRITV 63
Query: 63 EVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V + +P G +V +V V R A I+CV + E F G+IR++DVRATE
Sbjct: 64 -VPPCSVYSEIPSLGDIVTVKVIAVNPRFAKVQIICVRDSPLSEPFRGLIRKEDVRATEK 122
Query: 123 DKVDMHLSFRPGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAGK 170
DK++++ SFR GDIV + V+SLG+A + Y LSTA+N+LGVV A S+ K
Sbjct: 123 DKIELYKSFRAGDIVLSRVISLGEASSGYLLSTAENELGVVIANSSWDK 171
>gi|320583459|gb|EFW97672.1| exosome 3'-5 exonuclease subunit ski4 (Csl4) [Ogataea
parapolymorpha DL-1]
Length = 208
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 10/123 (8%)
Query: 61 TVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVR----------EKFSG 110
+V+ +G K P VVIA+VTK+ + DI+ V S+ E F
Sbjct: 62 SVQSSGAKIANFTPSENDVVIAKVTKISSNKVHLDILHVQDASIHLSNLLLNDYGENFKA 121
Query: 111 IIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
+IR D+R+T+ DKV + FRPGDIV+A V+SLGD Y+LSTA+NDLGV+ A S +GK
Sbjct: 122 VIRSSDIRSTDRDKVKVGECFRPGDIVKALVISLGDGINYYLSTARNDLGVIHARSKSGK 181
Query: 171 LVY 173
L+Y
Sbjct: 182 LLY 184
>gi|413939465|gb|AFW74016.1| hypothetical protein ZEAMMB73_791647 [Zea mays]
Length = 99
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 66/93 (70%), Gaps = 6/93 (6%)
Query: 88 MTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDA 147
M RMASADIMCV +K++REKF+G+IRQQDVRATEIDKVDM+ S+RPGDIV+A V+SL D
Sbjct: 1 MARMASADIMCVDSKAIREKFTGMIRQQDVRATEIDKVDMYQSYRPGDIVKAMVVSLIDE 60
Query: 148 R------AYFLSTAKNDLGVVSAESTAGKLVYC 174
+ F S + LG+++ + + C
Sbjct: 61 NDAVQIISVFFSCYQPWLGLLALRLSTSTFLSC 93
>gi|164661011|ref|XP_001731628.1| hypothetical protein MGL_0896 [Malassezia globosa CBS 7966]
gi|159105529|gb|EDP44414.1| hypothetical protein MGL_0896 [Malassezia globosa CBS 7966]
Length = 222
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 80/133 (60%), Gaps = 22/133 (16%)
Query: 62 VEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIM------CVGAKSVR---------- 105
V+V G + +P+ GS V+ RVT+V R A+ I+ C GA++ R
Sbjct: 54 VKVVGTQPPLALPKAGSTVLGRVTRVNPRQATVSILVVDGLPCGGAQATRVGASNNKAAG 113
Query: 106 -----EKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLG 160
F GIIR QDVR+TE D V + FRPGDIVRA+V+SLGDAR+Y+LSTA+N+LG
Sbjct: 114 EGIDGSDFQGIIRAQDVRSTEKDAVVLAECFRPGDIVRATVISLGDARSYYLSTAQNELG 173
Query: 161 VVSAESTAGKLVY 173
VV A +T G Y
Sbjct: 174 VVHA-TTRGPSQY 185
>gi|225709852|gb|ACO10772.1| 3-5 exoribonuclease CSL4 homolog [Caligus rogercresseyi]
Length = 222
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 93/168 (55%), Gaps = 9/168 (5%)
Query: 10 LVTPGEVLGKATEVK-AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVT--- 65
+V PG L A E +G G Y NG +Y+SL+G +R L EV
Sbjct: 6 IVVPGMRLCVADENNVSGPGTY--SQNGYIYSSLSGTMRLLREKKKKEKDMSKSEVRITV 63
Query: 66 --GHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
+ +P G +V +V V R A I+CV + E F G+IR++DVRATE D
Sbjct: 64 VPPCSVYSEIPSLGDIVTVKVIAVNPRFAKVQIICVRDSPLSEPFRGLIRKEDVRATEKD 123
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAGK 170
K++++ SFR GDIV + V+SLG+A + Y LSTA+N+LGVV A S+ K
Sbjct: 124 KIELYKSFRAGDIVLSRVISLGEASSGYLLSTAENELGVVIANSSWDK 171
>gi|291415944|ref|XP_002724209.1| PREDICTED: exosomal core protein CSL4 [Oryctolagus cuniculus]
Length = 195
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 88/157 (56%), Gaps = 7/157 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLRNLEEGSPGSGTYT--QHGYIFSSLAGCLTKTS----ENGALPVVSVMREAESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ GS+V +V+ + + A I+ VG+ ++ F G IR++DV ATE DKV+++ SF
Sbjct: 64 LPDVGSIVTCKVSSINSCFAKVHILYVGSTPLKNFFRGTIRKEDVPATEKDKVEIYKSFC 123
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTA 168
PGDIV A V+SLGD ++ Y L+T +N+LGVV A S +
Sbjct: 124 PGDIVLAKVISLGDTQSNYLLTTGENELGVVVAHSES 160
>gi|412986845|emb|CCO15271.1| predicted protein [Bathycoccus prasinos]
Length = 243
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 68/108 (62%)
Query: 63 EVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
E+ +PE VV A+ TK+ +MA D++ K ++ +FSGI+RQQDVR TEI
Sbjct: 103 EIEDENVRVRLPEVNDVVFAKCTKIREKMAQFDVLVCDGKPLKTEFSGIVRQQDVRKTEI 162
Query: 123 DKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
DKV M SF PGD+VR VL++G+ R+ L+T +N LGVV A+ K
Sbjct: 163 DKVIMEESFVPGDVVRCKVLAMGEGRSLVLATNENPLGVVRAKCKRCK 210
>gi|344304753|gb|EGW34985.1| hypothetical protein SPAPADRAFT_48042 [Spathaspora passalidarum
NRRL Y-27907]
Length = 277
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Query: 62 VEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATE 121
V G AH +P + I + + +AS+ + + E F G+IR QD+R+TE
Sbjct: 139 VGANGSTAHASMPPGSATTITQHAFNQSTIASSSTTAIQVPDIGENFRGVIRSQDIRSTE 198
Query: 122 IDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA--ESTAGKLVYCI 175
DKV + S+RPGDIVRA ++SLGD Y+LSTA+NDLGVV A E+ AG+L+Y I
Sbjct: 199 RDKVKVIESYRPGDIVRAVIISLGDGSNYYLSTARNDLGVVFAKSENGAGELMYPI 254
>gi|353235843|emb|CCA67849.1| related to CSL4-exosome core component [Piriformospora indica DSM
11827]
Length = 211
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 94/169 (55%), Gaps = 18/169 (10%)
Query: 3 VKEEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTV 62
V +M LV PG+ L +T KAG G Y+ NG+ ASL + S V
Sbjct: 21 VCSSQMSLVLPGQPLSAST--KAGDGVYM-DANGVSRASLIATFKNDS-----------V 66
Query: 63 EVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE--KFSGIIRQQDVRAT 120
+V K P ++VI V ++ ++ A+ I V + + ++ GIIR QDVRAT
Sbjct: 67 QVP--KGRASAPSENAIVIGTVVRLNSQQATISITIVNGVPLPQGDEYVGIIRSQDVRAT 124
Query: 121 EIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
E DKV + FR GDIV V+SLGD+R+Y++STA NDLGV+ A S++G
Sbjct: 125 EKDKVKIGDCFRGGDIVAGQVISLGDSRSYYVSTAHNDLGVLYATSSSG 173
>gi|195578461|ref|XP_002079084.1| GD22191 [Drosophila simulans]
gi|194191093|gb|EDX04669.1| GD22191 [Drosophila simulans]
Length = 204
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 8/165 (4%)
Query: 1 MVVKEEEMVLVTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQR 59
M +++E V+ PGE L ++ + + G G Y + NG VYAS +G++ DS D
Sbjct: 1 MSEQQDETVVCLPGERLCRSEDSIVLGIGTY--EQNGYVYASKSGIVNI----EDSGDNC 54
Query: 60 PTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRA 119
V V H +P G VV ARV + A I CV + + G++R++DVR
Sbjct: 55 QVVSVHKPGFHLTIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRE 114
Query: 120 TEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
TE D+VD++ SFRPGD++ A V++ + + + L+TA+N+LGVV A
Sbjct: 115 TEKDRVDIYKSFRPGDVILARVINQLE-QTFLLTTAENELGVVIA 158
>gi|330920336|ref|XP_003298966.1| hypothetical protein PTT_09856 [Pyrenophora teres f. teres 0-1]
gi|311327551|gb|EFQ92934.1| hypothetical protein PTT_09856 [Pyrenophora teres f. teres 0-1]
Length = 211
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 99/186 (53%), Gaps = 26/186 (13%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGL---------------------LRTLSP 51
PG+ L K ++ G G ++ H +YAS+ G L +++
Sbjct: 9 PGQFLAKTSDYLPGPGTHI--HESQIYASIAGPVISTPSSSTTNSTSKSSNLTPLLSITR 66
Query: 52 PPDSPDQRPTVEVTGHKAHGPV-PEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSG 110
PP S D P + A P+ P S V+ R+T++ R AS +I+ + RE F
Sbjct: 67 PPSSTD--PGILGPNSGAGIPLLPTVSSTVLVRITRLGPRFASCEILVIDNLVCREAFVA 124
Query: 111 IIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
IR++D+RATE DK+ + SFR GD+VR +V+SLGD+ Y+++T N+ GVV A S G+
Sbjct: 125 QIRREDIRATEKDKIKIEESFRVGDLVRGTVISLGDSGNYYVATDANEYGVVLARSEEGR 184
Query: 171 LVYCIS 176
+++ +S
Sbjct: 185 IMHPVS 190
>gi|24583644|ref|NP_609492.1| Csl4 [Drosophila melanogaster]
gi|7297825|gb|AAF53074.1| Csl4 [Drosophila melanogaster]
gi|20152101|gb|AAM11410.1| RE36848p [Drosophila melanogaster]
gi|220948428|gb|ACL86757.1| Csl4-PA [synthetic construct]
gi|220957608|gb|ACL91347.1| Csl4-PA [synthetic construct]
Length = 204
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 95/165 (57%), Gaps = 8/165 (4%)
Query: 1 MVVKEEEMVLVTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQR 59
M +++E V+ PGE L + + + G G Y + NG +YAS +G++ DS D+
Sbjct: 1 MSEQQDETVVCLPGERLCRTEDSIVLGIGTY--EQNGYIYASKSGIVNI----EDSGDKC 54
Query: 60 PTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRA 119
V V H +P G VV ARV + A I CV + + G++R++DVR
Sbjct: 55 QVVSVHKPGFHLTIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRE 114
Query: 120 TEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
TE D+VD++ SFRPGD++ A V++ + +++ L+TA+N+LGVV A
Sbjct: 115 TEKDRVDIYKSFRPGDVILARVINQLE-QSFLLTTAENELGVVIA 158
>gi|269856952|gb|ACZ51501.1| CND01650-like protein [Cryptococcus heveanensis]
Length = 191
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 89/161 (55%), Gaps = 14/161 (8%)
Query: 24 KAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIAR 83
+ G G Y + NG + AS+ G R V V G + G P+ GS+VI
Sbjct: 24 QCGSGCY--QLNGRILASVIGRPRR---------DGAVVSVIGREESGNTPDVGSIVIGT 72
Query: 84 VTKVMTRMASADIMCVGAKSV---REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRAS 140
V+++ + A + + + E+F G+IR DVR TE DKV M FR GD+V+A
Sbjct: 73 VSRLTPQQAHVTLTTSNDRPLPETSEEFVGVIRVGDVRLTERDKVKMGECFRLGDLVKAK 132
Query: 141 VLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
VLSLGDAR+Y+LSTA N+LGVV A+S AG + +S ++
Sbjct: 133 VLSLGDARSYYLSTAANELGVVYAKSEAGNPLLPLSYQEME 173
>gi|449551236|gb|EMD42200.1| hypothetical protein CERSUDRAFT_147841 [Ceriporiopsis subvermispora
B]
Length = 191
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 96/174 (55%), Gaps = 7/174 (4%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
LV PG+ + G+ V +G V ASL G R + P T+ ++G +
Sbjct: 5 LVLPGQPIPIPRGPIPQLGSGVYARDGAVRASLIGTPRF-----EGPVGFSTLAISGTRP 59
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVR--EKFSGIIRQQDVRATEIDKVDM 127
P P SVV+ +T++ A I V + E+F+G+IR QDVRATE DK+ +
Sbjct: 60 LPRPPAPNSVVLGSITRLSPLQAVLSINVVDGVPLPAGEEFTGVIRVQDVRATEKDKLKI 119
Query: 128 HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
FR GD+V+ V+SLGDAR+Y+++TA+NDLGV+ A S AG + +S ++
Sbjct: 120 ADCFRGGDVVKGLVISLGDARSYYVTTARNDLGVIFATSEAGATMEPVSWQEMR 173
>gi|240848929|ref|NP_001155702.1| exosomal core protein Csl4 [Acyrthosiphon pisum]
gi|239799438|dbj|BAH70639.1| ACYPI007328 [Acyrthosiphon pisum]
Length = 195
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 6 EEMVLVTPGEVLGKATEVKA-GKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV 64
E ++ PG+ L + GKG Y K +Y+SL G++ D+ + + +V
Sbjct: 2 ENRIVCVPGQRLCRLDSTHTLGKGTY--KRQDYIYSSLAGIVNV-----DNTNNKISVVE 54
Query: 65 TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDK 124
K VP PG +V A VT + M I V + E + +R+QDVR EIDK
Sbjct: 55 VLSKDQTIVPAPGDIVTAMVTTLNQDMCKCLITSVCGHELNETYRSSLRRQDVRMKEIDK 114
Query: 125 VDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
+DM FRPGDI+ A +L + +A + L+TA+N+LGVV A S G
Sbjct: 115 IDMLQCFRPGDIILARILPMTEAHTFKLTTAENELGVVIACSEYG 159
>gi|195340077|ref|XP_002036643.1| GM11135 [Drosophila sechellia]
gi|194130523|gb|EDW52566.1| GM11135 [Drosophila sechellia]
Length = 204
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 8/165 (4%)
Query: 1 MVVKEEEMVLVTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQR 59
M +++E V+ PGE L ++ + + G G Y + NG VYAS +G++ DS D
Sbjct: 1 MSEQQDENVVCLPGERLCRSEDSIVLGIGTY--EQNGYVYASKSGIVNI----EDSGDNC 54
Query: 60 PTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRA 119
V V H +P G VV ARV + A I CV + + G++R++DVR
Sbjct: 55 QVVSVHKPGFHLTIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRE 114
Query: 120 TEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
TE D+VD++ SFRPGD++ A V++ + + + L+TA+N+LGVV A
Sbjct: 115 TEKDRVDIYKSFRPGDVILARVINQLE-QTFLLTTAENELGVVIA 158
>gi|321257517|ref|XP_003193616.1| hypothetical protein CGB_D4080C [Cryptococcus gattii WM276]
gi|317460086|gb|ADV21829.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 191
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 90/161 (55%), Gaps = 14/161 (8%)
Query: 24 KAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIAR 83
K GKG Y +HNG + AS+ G R V V G + + S+VI
Sbjct: 24 KCGKGCY--EHNGQILASVVGRPRR---------DGAVVSVIGREETVGTVDVDSIVIGV 72
Query: 84 VTKVMTRMASADIMCVGAKSV---REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRAS 140
++++ + A + +G + + E F+G+IR D+R TE DKV M FR GDIV+A
Sbjct: 73 ISRLTPQQAHVTLTTLGDRPLPESSEDFTGLIRIADIRLTERDKVKMGECFRLGDIVKAK 132
Query: 141 VLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
VLSLGDAR+Y+LSTA N+LGVV A+S AG + +S ++
Sbjct: 133 VLSLGDARSYYLSTAANELGVVYAKSEAGNPLLPVSYQEME 173
>gi|392571253|gb|EIW64425.1| hypothetical protein TRAVEDRAFT_139212 [Trametes versicolor
FP-101664 SS1]
Length = 185
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 90/158 (56%), Gaps = 15/158 (9%)
Query: 26 GKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVT 85
G G Y+ +G V ASL G+ + T+E+ + H P P SVV+ VT
Sbjct: 23 GGGTYI--RDGTVRASLVGVPQYSGS---------TLEIKRTRPHPPAPN--SVVLGSVT 69
Query: 86 KVMTRMASADIMCVGAKSVR--EKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLS 143
++ A I V + E+F+G+IR QDVRATE DKV + FR GD++R VLS
Sbjct: 70 RLSPLQAVLSISVVDGVPLPAGEEFTGVIRVQDVRATEKDKVKIADCFRGGDVIRGLVLS 129
Query: 144 LGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
LGDAR+Y+++TA+NDLGV+ A S AG + +S ++
Sbjct: 130 LGDARSYYVTTARNDLGVIFATSEAGATMEPVSWQEMR 167
>gi|255953285|ref|XP_002567395.1| Pc21g03310 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589106|emb|CAP95228.1| Pc21g03310 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 243
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 100/216 (46%), Gaps = 55/216 (25%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV-------- 64
PG+ LG + AG G +V +YAS+ G + P S RPT+ V
Sbjct: 10 PGQRLGPLSTYSAGPGTHV--QQSFIYASIAGPVVADPAQPKS-QTRPTLRVSRGIPSKD 66
Query: 65 -----------TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE------- 106
T + +P S+V+ARVT+V R A+ I+ V +S +
Sbjct: 67 QASSNPAVPAVTSKPRYNTLPAVDSIVLARVTRVQKRQATVSILVVLDESATQSQDQSRT 126
Query: 107 --------------------------KFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRAS 140
+F +IR++DVRA E D+V M FR GDIVR S
Sbjct: 127 ASDNDNVASILTSAANPENHSSTDELRFQALIRKEDVRAVEKDRVVMDEMFRVGDIVRGS 186
Query: 141 VLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
V+SLGD Y+++TA+NDLGVV A S AG +++ +S
Sbjct: 187 VISLGDQSFYYITTARNDLGVVMARSDAGNMMFPVS 222
>gi|169779469|ref|XP_001824199.1| exosome complex subunit Csl4 [Aspergillus oryzae RIB40]
gi|83772938|dbj|BAE63066.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391870328|gb|EIT79513.1| exosomal 3'-5' exoribonuclease complex, subunit ski4 [Aspergillus
oryzae 3.042]
Length = 257
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 105/235 (44%), Gaps = 66/235 (28%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG------------------LLRTLSP 51
L PG+ LG T AG G +V + N VYAS+ G + R++
Sbjct: 8 LAIPGQRLGPVTSYSAGPGTHVQQSN--VYASIAGPVVVEPAQPGSKGKATLSVSRSIRA 65
Query: 52 PPDSPDQRPTVEVTGHK--AHGPVPEP----------GSVVIARVTKVMTRMASADIMCV 99
P +P G K A P+P SVV+ARVT+V R A+ I+ V
Sbjct: 66 PGTGNASKPVTTAPGAKPAATSATPKPKVKYNTLPAVDSVVLARVTRVQKRQATVSILVV 125
Query: 100 ----------------------------------GAKSVREKFSGIIRQQDVRATEIDKV 125
+ S +F +IR++DVRA E D+V
Sbjct: 126 LDESGSTQGVNPSQTTSDNDNIEAILSSAANPENHSSSDELRFQALIRKEDVRAVEKDRV 185
Query: 126 DMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDL 180
M FR GDIVR +V+SLGD Y+L+TA+NDLGVV A S AG +++ +S ++
Sbjct: 186 VMDEMFRVGDIVRGTVISLGDQSFYYLTTARNDLGVVMARSEAGNMMFPVSWKEM 240
>gi|392574228|gb|EIW67365.1| hypothetical protein TREMEDRAFT_45342 [Tremella mesenterica DSM
1558]
Length = 190
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 90/160 (56%), Gaps = 15/160 (9%)
Query: 24 KAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIAR 83
+ G G Y +HNG + A++ G R + V G K VP+ ++VI
Sbjct: 24 QCGPGCY--QHNGRILANIIGRPRR---------DGAMISVVG-KQDAAVPDVDAIVIGT 71
Query: 84 VTKVMTRMASADIMCVGAKSV---REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRAS 140
V++V + A +I V + V E F+G++R D+R TE DK+ M FR GD+V+A
Sbjct: 72 VSRVTPQQAIINIDVVDNRPVPETSEAFTGVVRLADIRLTERDKIRMGECFRLGDVVKAK 131
Query: 141 VLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDL 180
VLSLGDAR+Y+LSTA N+LGVV A S +G + +S D+
Sbjct: 132 VLSLGDARSYYLSTAANELGVVYATSESGNAMVPVSYQDM 171
>gi|410075571|ref|XP_003955368.1| hypothetical protein KAFR_0A07990 [Kazachstania africana CBS 2517]
gi|372461950|emb|CCF56233.1| hypothetical protein KAFR_0A07990 [Kazachstania africana CBS 2517]
Length = 271
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 36/139 (25%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSV---------------------------- 104
+P+ G VV+ R+T++ + A+ +I+ V K++
Sbjct: 111 LPKEGDVVLCRITRITLQRANVEIVAVENKNIPVDGGVGSNGLGETAVGGGSGGITFSIS 170
Query: 105 ------REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKND 158
E F GIIR QDVR+T+ DKV M SF+PGDIVRA VLSLGD Y+L+TA+ND
Sbjct: 171 QASSDLGETFRGIIRSQDVRSTDRDKVKMLESFKPGDIVRAQVLSLGDGNNYYLTTARND 230
Query: 159 LGVV--SAESTAGKLVYCI 175
LGV+ AE+ AG L+Y I
Sbjct: 231 LGVIFAKAENGAGGLMYAI 249
>gi|302698473|ref|XP_003038915.1| hypothetical protein SCHCODRAFT_13800 [Schizophyllum commune H4-8]
gi|300112612|gb|EFJ04013.1| hypothetical protein SCHCODRAFT_13800 [Schizophyllum commune H4-8]
Length = 185
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 17/176 (9%)
Query: 10 LVTPGE--VLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGH 67
+V PG+ VL + + G G Y + V ASL G+ R P + ++
Sbjct: 4 IVLPGQPLVLPRGPVPQLGTGVYARGSD--VRASLIGVPR---------HDGPKITISRI 52
Query: 68 KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVR--EKFSGIIRQQDVRATEIDKV 125
+ H P P +VV+ V ++ A I V + E+F+G+IR QDVRATE DKV
Sbjct: 53 RPH--PPSPNTVVLGSVIRLTPLQAIIAISVVDGVPLPPGEEFTGVIRTQDVRATEKDKV 110
Query: 126 DMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
+ FR GD+VR V+SLGDAR+YF++TA+NDLGVV A S AG + +S ++
Sbjct: 111 KIGDCFRGGDVVRGVVISLGDARSYFITTARNDLGVVFATSEAGATMQPVSWQEMR 166
>gi|238500117|ref|XP_002381293.1| exosome complex subunit Csl4, putative [Aspergillus flavus
NRRL3357]
gi|220693046|gb|EED49392.1| exosome complex subunit Csl4, putative [Aspergillus flavus
NRRL3357]
Length = 257
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 105/235 (44%), Gaps = 66/235 (28%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG------------------LLRTLSP 51
L PG+ LG T AG G +V + N VYAS+ G + R++
Sbjct: 8 LAIPGQRLGPVTSYSAGPGTHVQQSN--VYASIAGPVVVEPAHPGSKGKATLSVSRSIRA 65
Query: 52 PPDSPDQRPTVEVTGHK--AHGPVPEP----------GSVVIARVTKVMTRMASADIMCV 99
P +P G K A P+P SVV+ARVT+V R A+ I+ V
Sbjct: 66 PGTGNASKPVTTAPGAKPAATSATPKPKVKYNTLPAVDSVVLARVTRVQKRQATVSILVV 125
Query: 100 ----------------------------------GAKSVREKFSGIIRQQDVRATEIDKV 125
+ S +F +IR++DVRA E D+V
Sbjct: 126 LDESGSTQGVTPSQTTSDNDNIEAILSSAANPENHSSSDELRFQALIRKEDVRAVEKDRV 185
Query: 126 DMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDL 180
M FR GDIVR +V+SLGD Y+L+TA+NDLGVV A S AG +++ +S ++
Sbjct: 186 VMDEMFRVGDIVRGTVISLGDQSFYYLTTARNDLGVVMARSEAGNMMFPVSWKEM 240
>gi|388855285|emb|CCF51179.1| related to CSL4-exosome core component [Ustilago hordei]
Length = 259
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 77/134 (57%), Gaps = 27/134 (20%)
Query: 62 VEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV--------------------GA 101
+ ++G + VP+P S VIARVT+V R A I+ V G
Sbjct: 68 ISISGVENRFVVPQPDSTVIARVTRVTPRQAYLSILIVDGLPCGSSSSTSSTFVQSGLGN 127
Query: 102 KSVRE----KFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKN 157
+ E F G++R QDVR TE DKV + FRPGDIVRA+V+SLGDAR+Y+LSTA+N
Sbjct: 128 HAAGEGEGVDFQGVVRSQDVRTTEKDKVKLADCFRPGDIVRATVISLGDARSYYLSTAEN 187
Query: 158 DLGV---VSAESTA 168
LGV VSA ST+
Sbjct: 188 SLGVIYAVSATSTS 201
>gi|451851766|gb|EMD65064.1| hypothetical protein COCSADRAFT_36405 [Cochliobolus sativus ND90Pr]
Length = 211
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 22/184 (11%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTL-SPPPDSPDQR-----PTVEVT- 65
PG++LG + G G ++ + +YAS+ G + ++ S P +P P V +T
Sbjct: 9 PGQLLGSIDKYSPGPGTHI--YESQIYASIAGPVVSVGSAPQPTPGSNKTKLPPLVAITR 66
Query: 66 ----------GHKAHGPVP---EPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGII 112
G + G VP S V+ R+T++ R AS +I+ V RE F I
Sbjct: 67 PPTFSDPGILGPNSGGGVPLLPTVSSTVLVRITRLGPRFASCEILVVDDAVCREAFLAQI 126
Query: 113 RQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLV 172
R++D+RATE DK+ + SFR GD+VR +V+SLGD+ Y+++T +N+ GVV A S G+++
Sbjct: 127 RREDIRATEKDKIKIEESFRVGDLVRGTVISLGDSGNYYVATDRNEYGVVLARSEEGRVM 186
Query: 173 YCIS 176
+ +S
Sbjct: 187 HPVS 190
>gi|169844195|ref|XP_001828819.1| exoribonuclease [Coprinopsis cinerea okayama7#130]
gi|116510190|gb|EAU93085.1| exoribonuclease [Coprinopsis cinerea okayama7#130]
Length = 206
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 93/167 (55%), Gaps = 15/167 (8%)
Query: 6 EEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVT 65
++ VL+ ++ +A + G G Y + + ASL G + Q T+ +
Sbjct: 7 QQQVLLPGQQISVRAPAPQLGTGTY--SRDAQIRASLLGAPKL---------QGSTLTIP 55
Query: 66 GHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVR--EKFSGIIRQQDVRATEID 123
+ H P P SVV+ VT++ A I V + E+F+G+IR QDVRATE D
Sbjct: 56 QVRPHPPAPN--SVVLGSVTRLSPLQAFLSITVVDGIPLPAGEEFTGVIRSQDVRATEKD 113
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
+V + FR GD+VR V+SLGDAR+YF++TA+NDLGV+ A S AGK
Sbjct: 114 RVKIGDCFRGGDVVRGVVISLGDARSYFITTARNDLGVIYATSEAGK 160
>gi|388579965|gb|EIM20284.1| hypothetical protein WALSEDRAFT_58311 [Wallemia sebi CBS 633.66]
Length = 187
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 65 TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGA-----KSVREKFSGIIRQQDVRA 119
+ HK P+PE S V+A V ++ ++ A+ + + S F I+R QDVR
Sbjct: 48 SAHKNAQPLPEIDSEVLATVVRLNSKQATLQLDVIDGVPCTNNSQDSSFQAILRSQDVRQ 107
Query: 120 TEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
T+ D+V M+ RPGDIVRASV+SLGDA+ Y+LSTAKN+LGVV A S G + IS
Sbjct: 108 TDKDRVKMYNCVRPGDIVRASVISLGDAKNYYLSTAKNELGVVFATSEYGNPMIPIS 164
>gi|170033758|ref|XP_001844743.1| exosomal 3'-5' exoribonuclease complex subunit ski4 [Culex
quinquefasciatus]
gi|167874820|gb|EDS38203.1| exosomal 3'-5' exoribonuclease complex subunit ski4 [Culex
quinquefasciatus]
Length = 213
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 10 LVTPGEVLGKATEVK-AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHK 68
+ PG+ L TE G+G Y + G ++ASL+G++R ++ + V
Sbjct: 17 ICVPGQRLCAVTEYTVGGEGTY--EKLGYLHASLSGVVRIRKRKKNN-----HISVASFG 69
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMH 128
+ VP G VV A++T + R A I+C+G + + GI+R++DVRATE D+V+M+
Sbjct: 70 SKTVVPVMGDVVTAKITVINQRFAKCVIICIGKTCLNRPYRGILRKEDVRATEKDRVEMY 129
Query: 129 LSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAEST 167
FRPGD++ A VL + Y L+TA+N+LGV A ST
Sbjct: 130 KCFRPGDVILARVLPQIELNTYHLTTAENELGVAVALST 168
>gi|443896595|dbj|GAC73939.1| exosomal 3'-5' exoribonuclease complex, subunit ski4 [Pseudozyma
antarctica T-34]
Length = 257
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 74/130 (56%), Gaps = 24/130 (18%)
Query: 61 TVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV--------------------G 100
TV ++G + VP P S VIARVT+V R A I+ V G
Sbjct: 78 TVSISGVENRFVVPRPDSTVIARVTRVTPRQAYLSILIVDGQPCGSSSSTSSTFVQSGLG 137
Query: 101 AKSVRE----KFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAK 156
+ E F G++R QDVR+TE DKV + FRPGDIVRA+V+SLGDAR+Y+LSTA
Sbjct: 138 NHAAGEGEGIDFQGVVRSQDVRSTEKDKVKLADCFRPGDIVRATVISLGDARSYYLSTAA 197
Query: 157 NDLGVVSAES 166
N LGV+ A S
Sbjct: 198 NHLGVIYALS 207
>gi|71004342|ref|XP_756837.1| hypothetical protein UM00690.1 [Ustilago maydis 521]
gi|46095639|gb|EAK80872.1| hypothetical protein UM00690.1 [Ustilago maydis 521]
Length = 307
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 74/133 (55%), Gaps = 24/133 (18%)
Query: 58 QRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV------------------ 99
Q V ++G + VP P S VIARVT+V R A I+ V
Sbjct: 124 QTEIVSISGVENRFVVPRPDSTVIARVTRVTPRQAYLSILIVDGQPCGSSSSTSSTFVQS 183
Query: 100 --GAKSVRE----KFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLS 153
G + E F G++R QDVR+TE DKV + FRPGDIVRA+V+SLGDAR+Y+LS
Sbjct: 184 GLGNHAAGEGEGVDFQGVVRSQDVRSTEKDKVKIADCFRPGDIVRATVISLGDARSYYLS 243
Query: 154 TAKNDLGVVSAES 166
TA N LGV+ A S
Sbjct: 244 TAGNSLGVIYATS 256
>gi|390604784|gb|EIN14175.1| hypothetical protein PUNSTDRAFT_117746 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 186
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 97/176 (55%), Gaps = 17/176 (9%)
Query: 10 LVTPGEVLG--KATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGH 67
+V PG+ L + + G G Y+ G V ASL G R Q T+ +
Sbjct: 5 IVLPGQPLALPRGPVPQLGTGIYL--RGGQVRASLIGEPRY---------QGSTLAIHTV 53
Query: 68 KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVR--EKFSGIIRQQDVRATEIDKV 125
+ H P P SVV+ VT++ A+ I V + E+F+GIIR QDVRATE DKV
Sbjct: 54 RPHPPAPN--SVVLGSVTRLSPLQANVAITVVDGVPLPAGEEFTGIIRVQDVRATEKDKV 111
Query: 126 DMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
+ FR GD+V+ V+SLGDAR+Y+++TA+NDLGV+ A S AG + +S ++
Sbjct: 112 KIADCFRGGDVVKGVVISLGDARSYYITTARNDLGVIFATSEAGATMEPVSWQEMR 167
>gi|358374130|dbj|GAA90724.1| 3'-5' exoribonuclease [Aspergillus kawachii IFO 4308]
Length = 251
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 100/225 (44%), Gaps = 60/225 (26%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASL-----------------------TGLL 46
L PG+ LG AG G +V N +YAS+ TG
Sbjct: 8 LAIPGQRLGSIASYAAGPGTHV--QNATIYASIAGPVVVDQAQPSSKAKLILSVSRTGPK 65
Query: 47 RTLSPPPDS-PDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVR 105
+ +PPP + +P + +P SVV+ARVT+V R A+ I+ V +S
Sbjct: 66 KAAAPPPSTKASAKPATTGKPKLRYNTLPAVDSVVLARVTRVQKRQATVSILVVLDESAS 125
Query: 106 E----------------------------------KFSGIIRQQDVRATEIDKVDMHLSF 131
+F +IR++DVRA E D+V M F
Sbjct: 126 SQPLNPAQTASDNDNIEAILSSAANPENHSNSDELRFQALIRKEDVRAVEKDRVVMDEMF 185
Query: 132 RPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
R GDIVR +V+SLGD Y+L+TA+NDLGVV A S +G +++ +S
Sbjct: 186 RVGDIVRGTVISLGDQSFYYLTTARNDLGVVMARSESGNMMFPVS 230
>gi|451995427|gb|EMD87895.1| hypothetical protein COCHEDRAFT_1206173 [Cochliobolus
heterostrophus C5]
Length = 211
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 103/184 (55%), Gaps = 22/184 (11%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTL--SPPPDSPDQR----PTVEVT- 65
PG++LG + G G ++ + +YAS+ G + ++ +P P + + P V +T
Sbjct: 9 PGQLLGSIEKYSPGPGTHI--YESQIYASIAGPVVSVGSAPQPIAGSNKTKLPPLVAITR 66
Query: 66 ----------GHKAHGPVP---EPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGII 112
G + G VP S V+ R+T++ R AS +I+ V RE F I
Sbjct: 67 PPSFSDPGILGPNSGGGVPLLPTVSSTVLVRITRLGPRFASCEILVVDDAVCREAFLAQI 126
Query: 113 RQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLV 172
R++D+RATE DK+ + SFR GD+VR +V+SLGD+ Y+++T +N+ GVV A S G+++
Sbjct: 127 RREDIRATEKDKIKIEESFRVGDLVRGTVISLGDSGNYYVATDRNEYGVVLARSEEGRVM 186
Query: 173 YCIS 176
+ +S
Sbjct: 187 HPVS 190
>gi|402219723|gb|EJT99795.1| hypothetical protein DACRYDRAFT_55085 [Dacryopinax sp. DJM-731 SS1]
Length = 180
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
Query: 77 GSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDI 136
GS+V+ ++T + A+ I+ V + E+F+GIIR QD+RATE DK+ M FR GD+
Sbjct: 62 GSLVLGKITHLSPTSATLLILAV-DNNPSEEFTGIIRTQDIRATERDKLRMGDCFRGGDV 120
Query: 137 VRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDL 180
VRA VLSLGD R Y+LSTA+NDLGVV A S AG ++ I+ ++
Sbjct: 121 VRALVLSLGDQRNYYLSTARNDLGVVFATSEAGGIMQPINWQEM 164
>gi|323508241|emb|CBQ68112.1| related to CSL4-exosome core component [Sporisorium reilianum SRZ2]
Length = 263
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 72/126 (57%), Gaps = 24/126 (19%)
Query: 61 TVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV--------------------G 100
T+ ++G + VP P S VIARVT+V R A I+ V G
Sbjct: 72 TISISGVENRFVVPRPDSTVIARVTRVTPRQAYLSILIVDGQPCGSSSSTASTFVQSGLG 131
Query: 101 AKSVRE----KFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAK 156
+ E F G++R QDVR+TE DKV + FRPGDIVRA+V+SLGDAR+Y+LSTA
Sbjct: 132 NHAAGEGEGIDFQGVVRSQDVRSTEKDKVKLADCFRPGDIVRATVISLGDARSYYLSTAG 191
Query: 157 NDLGVV 162
N LGV+
Sbjct: 192 NSLGVI 197
>gi|425767161|gb|EKV05739.1| Exosome complex subunit Csl4, putative [Penicillium digitatum Pd1]
gi|425780697|gb|EKV18699.1| Exosome complex subunit Csl4, putative [Penicillium digitatum
PHI26]
Length = 246
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 102/219 (46%), Gaps = 58/219 (26%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV---TGHKA 69
PG+ LG + AG G +V +YAS+ G + P S RPT+ V T KA
Sbjct: 10 PGQRLGPLSTYCAGPGTHV--QQSFIYASIAGPVVADPAQPKS-QTRPTIRVLRVTSPKA 66
Query: 70 HG-----------PVPEP--------GSVVIARVTKVMTRMASADIMCVGAKSVRE---- 106
P+P S+V+ARVT+V R A+ I+ V +S +
Sbjct: 67 QAGSNPAVPAASSTTPKPRYNTLPAVDSIVLARVTRVQKRQATVSILVVIDESKSQLQDP 126
Query: 107 -----------------------------KFSGIIRQQDVRATEIDKVDMHLSFRPGDIV 137
+F +IR++DVRA E D+V M FR GDIV
Sbjct: 127 SRTDSDNDNVASILTSAANPENHSSTDELRFQALIRKEDVRAVEKDRVVMDEMFRVGDIV 186
Query: 138 RASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
R SV+SLGD Y+++TA+NDLGVV A S AG +++ +S
Sbjct: 187 RGSVISLGDQSFYYITTARNDLGVVMARSDAGNMMFPVS 225
>gi|324506406|gb|ADY42737.1| 3'-5' exoribonuclease CSL4 [Ascaris suum]
gi|324522916|gb|ADY48155.1| 3'-5' exoribonuclease CSL4 [Ascaris suum]
Length = 224
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 11 VTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGH-- 67
V PG+ L +E ++AG G Y + G +YASL G++ L P + Q TVEV +
Sbjct: 20 VFPGDRLFPISERLRAGIGTY--ELFGHIYASLFGVVHML-PATEGTKQVTTVEVRRNNE 76
Query: 68 -KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
+ VP G + A+V + A I+CV A + +FS ++R++D+RATE DK +
Sbjct: 77 IEQRHIVPYIGCIATAKVQNIGPNYAKCGIVCVDASMLAHEFSALLRKEDIRATERDKTE 136
Query: 127 MHLSFRPGDIVRASVLSLGDARAYF-LSTAKNDLGVVSAESTAGK 170
++L +PGD++ A V+ G+ + F LSTA+++LGVVS++ AG+
Sbjct: 137 IYLCVQPGDVILARVIGFGETQTTFLLSTAEDELGVVSSKGDAGE 181
>gi|121714042|ref|XP_001274632.1| 3'-5' exoribonuclease (Csl4), putative [Aspergillus clavatus NRRL
1]
gi|119402785|gb|EAW13206.1| 3'-5' exoribonuclease (Csl4), putative [Aspergillus clavatus NRRL
1]
Length = 253
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 103/229 (44%), Gaps = 66/229 (28%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG------------------------- 44
L PG+ LG T AG G +V N +YAS+ G
Sbjct: 8 LAIPGQQLGSITSYFAGPGTHVKNAN--IYASIAGPVIIEQTQPSSKVKAIVSVSRNLNT 65
Query: 45 ---LLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV-- 99
L+ +P P +P + T + +P S+V+ARVT+V R A+ I+ V
Sbjct: 66 QPGLVAKPTPAPSTPAK--TTAAKPKLRYNTLPAVDSIVLARVTRVQKRQATVSILVVLD 123
Query: 100 ---------GAKSVRE-----------------------KFSGIIRQQDVRATEIDKVDM 127
+K+ + +F +IR++DVRA E D+V M
Sbjct: 124 ASSSAQIPDSSKTASDNDNIASILTSAANPENHSNSDELRFQALIRKEDVRAVEKDRVVM 183
Query: 128 HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
FR GDIVR +V+SLGD Y+L+TA+NDLGVV A S AG +++ +S
Sbjct: 184 DEMFRVGDIVRGTVISLGDQSFYYLTTARNDLGVVMARSEAGNMMFPVS 232
>gi|45185031|ref|NP_982748.1| ABL199Wp [Ashbya gossypii ATCC 10895]
gi|44980667|gb|AAS50572.1| ABL199Wp [Ashbya gossypii ATCC 10895]
gi|374105950|gb|AEY94860.1| FABL199Wp [Ashbya gossypii FDAG1]
Length = 288
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 80/142 (56%), Gaps = 34/142 (23%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCV-----------GAK------------------- 102
+P+ G VV+ RVT++ + A+ +I+ V G+K
Sbjct: 130 LPKEGDVVLTRVTRITLQRANVEILAVENTNSPIDYGVGSKGSGIVASNGGNTGFSMSQV 189
Query: 103 --SVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLG 160
+ E F GIIR QDVRAT D+V M +FRPGDIVRA VLSLGD Y+L+TA+NDLG
Sbjct: 190 PSDLGETFRGIIRSQDVRATNRDQVKMVEAFRPGDIVRAQVLSLGDGSNYYLTTARNDLG 249
Query: 161 VVSAEST--AGKLVYCISKYDL 180
VV A+++ AG L+Y + + +
Sbjct: 250 VVFAKASNGAGGLMYAVDWHTM 271
>gi|426201526|gb|EKV51449.1| hypothetical protein AGABI2DRAFT_189708 [Agaricus bisporus var.
bisporus H97]
Length = 181
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 71/110 (64%), Gaps = 2/110 (1%)
Query: 74 PEPGSVVIARVTKVMTRMASADIMCVGAKSVR--EKFSGIIRQQDVRATEIDKVDMHLSF 131
P P SVV+ VT++ A I V + E+F+G+IR QDVRATE D+V + F
Sbjct: 56 PSPNSVVLGTVTRLSPLQAMISISVVDGVPLPAGEEFTGVIRAQDVRATEKDRVKIGDCF 115
Query: 132 RPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
R GD+VR V+SLGDAR+YF+STA+NDLGV+ A S AG + +S ++
Sbjct: 116 RGGDVVRGLVISLGDARSYFVSTARNDLGVIFATSEAGATLEPVSWQEMR 165
>gi|363735296|ref|XP_003641534.1| PREDICTED: uncharacterized protein LOC423844 [Gallus gallus]
Length = 363
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
Query: 83 RVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVL 142
+V + +R A +I+ VG+ ++ F G IR++D+RATE DKV+++ SFRPGDIV A V+
Sbjct: 242 QVCSINSRFAKVNILYVGSTPLKSTFRGTIRREDIRATEKDKVEVYKSFRPGDIVLAKVI 301
Query: 143 SLGDARA-YFLSTAKNDLGVVSAESTAGKLVYCISKYDLNIILFYS 187
SLGDA++ Y LSTA+N+LGVV A S AG + IS ++ ++
Sbjct: 302 SLGDAQSNYLLSTAENELGVVVARSEAGVQMVPISWCEMQCPQTHT 347
>gi|409083427|gb|EKM83784.1| hypothetical protein AGABI1DRAFT_110396 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 181
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 71/110 (64%), Gaps = 2/110 (1%)
Query: 74 PEPGSVVIARVTKVMTRMASADIMCVGAKSVR--EKFSGIIRQQDVRATEIDKVDMHLSF 131
P P SVV+ VT++ A I V + E+F+G+IR QDVRATE D+V + F
Sbjct: 56 PSPNSVVLGTVTRLSPLQAMISISVVDGVPLPAGEEFTGVIRAQDVRATEKDRVKIGDCF 115
Query: 132 RPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
R GD+VR V+SLGDAR+YF+STA+NDLGV+ A S AG + +S ++
Sbjct: 116 RGGDVVRGLVISLGDARSYFVSTARNDLGVIFATSEAGATLEPVSWQEMR 165
>gi|324507333|gb|ADY43114.1| 3'-5' exoribonuclease CSL4 [Ascaris suum]
Length = 224
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 11 VTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGH-- 67
V PG+ L +E ++AG G Y + G +YASL G++ L P + Q TVEV +
Sbjct: 20 VFPGDRLFPISERLRAGIGTY--ELFGHIYASLFGVVHML-PATEGTKQVTTVEVRRNNE 76
Query: 68 -KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
+ VP G + A+V + A I+CV A + +FS ++R++D+RATE DK +
Sbjct: 77 IEQRHIVPYIGCIATAKVQNIGPNYAKCGIVCVDASMLAHEFSALLRKEDIRATERDKTE 136
Query: 127 MHLSFRPGDIVRASVLSLGDARAYF-LSTAKNDLGVVSAESTAGK 170
++L +PGD++ A V+ G+ + F LSTA+++LGVVS++ AG+
Sbjct: 137 IYLCVQPGDVILARVIGFGETQTTFLLSTAEDELGVVSSKGDAGE 181
>gi|260950951|ref|XP_002619772.1| hypothetical protein CLUG_00931 [Clavispora lusitaniae ATCC 42720]
gi|238847344|gb|EEQ36808.1| hypothetical protein CLUG_00931 [Clavispora lusitaniae ATCC 42720]
Length = 295
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 68/110 (61%), Gaps = 5/110 (4%)
Query: 62 VEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAK--SVREKFSGIIRQQDVRA 119
+ TG AH VP G A++ +ASA +GA+ V E F G+IR QDVR
Sbjct: 161 IGATGATAHFSVPMGGG---AQILSSYAAVASAQGTMIGAQPYDVGEAFRGVIRSQDVRQ 217
Query: 120 TEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
T+ DKV + FRPGDIVRA VLSLGD Y+L+TA+NDLGVV A+S G
Sbjct: 218 TDRDKVRIADCFRPGDIVRAEVLSLGDGSNYYLTTARNDLGVVFAKSEGG 267
>gi|324523789|gb|ADY48303.1| 3'-5' exoribonuclease CSL4 [Ascaris suum]
Length = 253
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 11 VTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGH-- 67
V PG+ L +E ++AG G Y + G +YASL G++ L P + Q TVEV +
Sbjct: 20 VFPGDRLFPISERLRAGIGTY--ELFGHIYASLFGVVHML-PATEGTKQVTTVEVRRNNE 76
Query: 68 -KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
+ VP G + A+V + A I+CV A + +FS ++R++D+RATE DK +
Sbjct: 77 IEQRHIVPYIGCIATAKVQNIGPNYAKCGIVCVDASMLAHEFSALLRKEDIRATERDKTE 136
Query: 127 MHLSFRPGDIVRASVLSLGDARAYF-LSTAKNDLGVVSAESTAGK 170
++L +PGD++ A V+ G+ + F LSTA+++LGVVS++ AG+
Sbjct: 137 IYLCVQPGDVILARVIGFGETQTTFLLSTAEDELGVVSSKGDAGE 181
>gi|145348477|ref|XP_001418674.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578904|gb|ABO96967.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 127
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE-KFSGIIRQQDVRATEIDKVDMHLSF 131
VP G VV RVT+V+ + A +I V ++ R F+G++R+QD RA +D V++ F
Sbjct: 2 VPRGGDVVFGRVTRVLEKAAHVEIAAVNGRAPRGGDFAGVVRRQDARAHAVDSVELERCF 61
Query: 132 RPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
R GD+VRA VLSLGDAR+++L+TA +DLGVV A
Sbjct: 62 RAGDVVRAKVLSLGDARSFYLTTAGDDLGVVRA 94
>gi|393218356|gb|EJD03844.1| hypothetical protein FOMMEDRAFT_106067 [Fomitiporia mediterranea
MF3/22]
Length = 185
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Query: 74 PEPGSVVIARVTKVMTRMASADIMCVGAK--SVREKFSGIIRQQDVRATEIDKVDMHLSF 131
P P SVV+ +T++ A I V S+ E+F+G+IR QDVRATE DKV + F
Sbjct: 58 PAPNSVVLGTITRLSPLQAIISITVVDGMPLSLGEEFTGVIRSQDVRATEKDKVKLADCF 117
Query: 132 RPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
R GD+V+ V+SLGDAR+Y+++TA+NDLGV+ A S AG + +S ++
Sbjct: 118 RGGDVVKGIVISLGDARSYYITTARNDLGVIFATSEAGATMEPLSWQEMR 167
>gi|326923846|ref|XP_003208144.1| PREDICTED: 3'-5' exoribonuclease CSL4 homolog [Meleagris gallopavo]
Length = 126
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 84 VTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLS 143
V + +R A +I+ VG+ ++ F G IR++D+RATE DKV+++ SFRPGDIV A V+S
Sbjct: 6 VCSINSRFAKVNILYVGSTPLKSTFRGTIRKEDIRATEKDKVEVYKSFRPGDIVLAKVIS 65
Query: 144 LGDARA-YFLSTAKNDLGVVSAESTAG 169
LGDA++ Y LSTA+N+LGVV A S AG
Sbjct: 66 LGDAQSNYLLSTAENELGVVVARSEAG 92
>gi|395334627|gb|EJF67003.1| hypothetical protein DICSQDRAFT_95987 [Dichomitus squalens LYAD-421
SS1]
Length = 185
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 98/176 (55%), Gaps = 17/176 (9%)
Query: 10 LVTPGEV--LGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGH 67
+V PG+ L + + G G Y +G+V ASL G+ P S T+E+
Sbjct: 5 VVLPGQPVPLPRGPMPQIGSGIY--SRDGIVRASLIGV------PSYSGS---TLEIKRT 53
Query: 68 KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVR--EKFSGIIRQQDVRATEIDKV 125
+ P P SVV+ VT++ A I V + E+F+G++R QDVRATE DKV
Sbjct: 54 RPRPPAPN--SVVLGTVTRMSPLQAVLSITVVDGVPLPAGEEFTGVVRVQDVRATEKDKV 111
Query: 126 DMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
+ FR GD+VR VLSLGDAR+Y+++TA+NDLGV+ A S AG + +S ++
Sbjct: 112 KIADCFRGGDVVRGLVLSLGDARSYYVTTARNDLGVIFATSEAGATMEPVSWQEMR 167
>gi|50543262|ref|XP_499797.1| YALI0A05995p [Yarrowia lipolytica]
gi|49645662|emb|CAG83722.1| YALI0A05995p [Yarrowia lipolytica CLIB122]
Length = 285
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 75/141 (53%), Gaps = 36/141 (25%)
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKS------------------------- 103
A +P+ G ++ARV+K+ ++ A+ +I+ V +
Sbjct: 108 ASSGLPKVGDYILARVSKLTSKQANVEILVVEGQGGVGQDAGLGLNGNENGIHSNPLSNA 167
Query: 104 -----------VREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFL 152
+ E F GIIR DVRATE DKV M L F+PGDIVRA V+SLGD Y+L
Sbjct: 168 GSLVEGAIRSDLGEGFGGIIRSIDVRATERDKVKMELCFKPGDIVRAQVISLGDGANYYL 227
Query: 153 STAKNDLGVVSAESTAGKLVY 173
STAKN+LGV+ A S G+L+Y
Sbjct: 228 STAKNELGVLFARSKIGELMY 248
>gi|159126973|gb|EDP52089.1| 3'-5' exoribonuclease (Csl4), putative [Aspergillus fumigatus
A1163]
Length = 249
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 99/223 (44%), Gaps = 58/223 (26%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQ----------R 59
L PG+ LG + AG G +V N +YAS+ G + P S + R
Sbjct: 8 LAIPGQRLGPVSSYSAGPGTHV--QNANIYASIAGPVVLQQAQPSSKSKSILSVSRNLPR 65
Query: 60 PTVEVTGHKA------------HGPVPEPGSVVIARVTKVMTRMASADIMCV-------- 99
T T + +P S+V+ARVT+V R A+ I+ V
Sbjct: 66 KTDPSTSTTPVKATTTTKPKLRYNTLPAVDSIVLARVTRVQKRQATVSILVVLDESAGSQ 125
Query: 100 --------------------------GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRP 133
+ S +F +IR++DVRA E D+V M FR
Sbjct: 126 DPDPSKTASDNDNIVSILASAANPENHSNSDELRFQALIRKEDVRAVEKDRVVMDEMFRV 185
Query: 134 GDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
GDIVR SV+SLGD Y+L+TA+NDLGVV A S AG +++ +S
Sbjct: 186 GDIVRGSVISLGDQSFYYLTTARNDLGVVMARSEAGNMMFPVS 228
>gi|194861810|ref|XP_001969861.1| GG10323 [Drosophila erecta]
gi|190661728|gb|EDV58920.1| GG10323 [Drosophila erecta]
Length = 204
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Query: 1 MVVKEEEMVLVTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQR 59
M +++E V+ PGE L + + + G G Y + NG +YAS +G++ +S +
Sbjct: 1 MSAQQDETVVCLPGERLCRTEDNIVLGIGTY--EQNGYIYASKSGIVHI----EESGENC 54
Query: 60 PTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRA 119
V V H +P G VV ARV + I CV + + G++R++DVR
Sbjct: 55 QVVSVHKPGFHLTIPATGDVVTARVLVTTPKFVKCAIFCVRNVLLESSYRGLLRKEDVRE 114
Query: 120 TEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
TE D+VD++ SFRPGD++ A V++ + ++ L+TA+N+LGVV A ++ +
Sbjct: 115 TEKDRVDIYKSFRPGDVILARVINQME-NSFLLTTAENELGVVIAYASDNR 164
>gi|392597282|gb|EIW86604.1| exoribonuclease [Coniophora puteana RWD-64-598 SS2]
Length = 187
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 15/157 (9%)
Query: 26 GKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVT 85
G G Y+++ G V AS+ G+ R Q T+ + + H P SVV+ VT
Sbjct: 22 GGGLYLSE--GQVRASVVGVPR---------QQGSTISIPRIRPHPPTTN--SVVLGTVT 68
Query: 86 KVMTRMASADIMCVG--AKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLS 143
++ A I V E+F G+IR QDVRATE DKV + FR GD+V+ SV+S
Sbjct: 69 RLTPIQAMVSISVVDDVPLPTGEEFIGVIRNQDVRATEKDKVKIGDCFRGGDVVKGSVIS 128
Query: 144 LGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDL 180
LGDAR+Y+++TA+NDLGVV A S AG + +S ++
Sbjct: 129 LGDARSYYITTARNDLGVVFATSEAGATMDPVSWKEM 165
>gi|317034769|ref|XP_001401124.2| exosome complex subunit Csl4 [Aspergillus niger CBS 513.88]
gi|350639558|gb|EHA27912.1| hypothetical protein ASPNIDRAFT_184867 [Aspergillus niger ATCC
1015]
Length = 251
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 102/225 (45%), Gaps = 60/225 (26%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG----------------LLRTLSPPP 53
L PG+ LG AG G +V N +YAS+ G L + + P
Sbjct: 8 LAIPGQRLGSIASYAAGPGTHV--QNATIYASIAGPVVVDQAQPSSKAKLILSVSRTGPK 65
Query: 54 DSPDQRPTVEVTGHKA--------HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVR 105
+ P+ + + + A + +P SVV+ARVT+V R A+ I+ V +S
Sbjct: 66 KAAAPAPSTKASANPANTGKPKLRYNTLPAVDSVVLARVTRVQKRQATVSILVVLDESAS 125
Query: 106 E----------------------------------KFSGIIRQQDVRATEIDKVDMHLSF 131
+F +IR++DVRA E D+V M F
Sbjct: 126 SQPLNPSQTASDNDNIEAILSSAANPENHSNSDELRFQALIRKEDVRAVEKDRVVMDEMF 185
Query: 132 RPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
R GDIVR +V+SLGD Y+L+TA+NDLGVV A S +G +++ +S
Sbjct: 186 RVGDIVRGTVISLGDQSFYYLTTARNDLGVVMARSESGNMMFPVS 230
>gi|345323768|ref|XP_001505605.2| PREDICTED: exosome complex component CSL4-like, partial
[Ornithorhynchus anatinus]
Length = 121
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
Query: 84 VTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLS 143
V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SFRPGDIV A V+S
Sbjct: 1 VSSINSRFARVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYKSFRPGDIVLAKVIS 60
Query: 144 LGDARA-YFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
LGDA++ Y L+TA+N+LGVV A AG + IS ++
Sbjct: 61 LGDAQSNYLLTTAENELGVVVAHGEAGAQLVPISWCEMQ 99
>gi|357603889|gb|EHJ63965.1| hypothetical protein KGM_08299 [Danaus plexippus]
Length = 223
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Query: 25 AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARV 84
AG G Y K G +Y+ LTG+L+T D + + V + +P G +V A+V
Sbjct: 28 AGPGTYELK--GYIYSMLTGVLKTEE---DEERKATRICVVSPRTPSVLPVTGDIVTAKV 82
Query: 85 TKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSL 144
T V +R + I+CVG + + GI++++D++ T+ D++D + FRPGDI+ A VL +
Sbjct: 83 TVVNSRQVNCIILCVGPSPLVRPYRGILKKEDIKFTDKDRIDPYKCFRPGDIILARVLPM 142
Query: 145 GDARAYFLSTAKNDLGVVSA 164
+ Y LSTA+N+LGVV A
Sbjct: 143 TEIHWYHLSTAENELGVVIA 162
>gi|115399486|ref|XP_001215332.1| hypothetical protein ATEG_06154 [Aspergillus terreus NIH2624]
gi|114192215|gb|EAU33915.1| hypothetical protein ATEG_06154 [Aspergillus terreus NIH2624]
Length = 248
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 100/222 (45%), Gaps = 57/222 (25%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG------------------LLRTLSP 51
L PG+ LG AG G +V N +YAS+ G ++R+++
Sbjct: 8 LAIPGQCLGSIASYSAGPGTHV--QNANIYASIAGPVVVEQTPANAKGKSTVSVVRSIAK 65
Query: 52 PPDSPDQRPTVEVTGHK---AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE-- 106
S +P K + +P SVV+ARVT+V R + I+ V +S
Sbjct: 66 RAASTTAKPVAGAGSAKPKPKYNTLPAVDSVVLARVTRVQKRQVTVSILVVLDESASTQP 125
Query: 107 --------------------------------KFSGIIRQQDVRATEIDKVDMHLSFRPG 134
+F +IR++DVRA E D+V M FR G
Sbjct: 126 LNPSQTTSDNDDVAAILTSAANPENHSSSDELRFQALIRKEDVRAVEKDRVVMDEMFRVG 185
Query: 135 DIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
DIVR +V+SLGD Y+L+TA+NDLGVV A S AG +++ +S
Sbjct: 186 DIVRGTVISLGDQSFYYLTTARNDLGVVMARSEAGNMMFPVS 227
>gi|389751269|gb|EIM92342.1| hypothetical protein STEHIDRAFT_71046 [Stereum hirsutum FP-91666
SS1]
Length = 185
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Query: 74 PEPGSVVIARVTKVMTRMASADIMCVGAKSVR--EKFSGIIRQQDVRATEIDKVDMHLSF 131
P P S+V+ VT++ + A I V + E+F+G+IR QDVRATE DKV + F
Sbjct: 58 PTPSSLVLGSVTRLSPQQAMVSITVVDGVPLPAGEEFTGVIRTQDVRATEKDKVKIGDCF 117
Query: 132 RPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
R GD+V+ V+SLGDAR+Y+++TA+NDLGV+ A S AG + +S ++
Sbjct: 118 RGGDVVKGLVISLGDARSYYITTARNDLGVIFATSEAGGTMEPVSWQEMR 167
>gi|448114434|ref|XP_004202572.1| Piso0_001413 [Millerozyma farinosa CBS 7064]
gi|359383440|emb|CCE79356.1| Piso0_001413 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 88/179 (49%), Gaps = 55/179 (30%)
Query: 52 PPDSPDQRPTVEVTGHKAHGP------VPEPGSVVIARVTKVMTRMASADIMCV------ 99
P S Q+ ++ G++A +P G +V+ARV ++ + AS +I+ V
Sbjct: 94 PKASTYQKFHEQIEGNEAQDEENISINLPREGDIVLARVIRLNNKQASCEILTVENYGNV 153
Query: 100 ---------------------GAKSVR--------------------EKFSGIIRQQDVR 118
G++S+ E F GIIR QD+R
Sbjct: 154 GTDSGLGANGESSHKSVSASGGSQSLNNYSTVASSNSLINATSADLGETFKGIIRVQDIR 213
Query: 119 ATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAEST--AGKLVYCI 175
+TE DKV + SFRPGDIVRA ++SLGD Y+LSTA+NDLGV+ A+S AG L++ I
Sbjct: 214 STERDKVKIIESFRPGDIVRAQIISLGDGSNYYLSTARNDLGVIYAKSEGGAGDLMFAI 272
>gi|70997093|ref|XP_753301.1| exosome complex subunit Csl4 [Aspergillus fumigatus Af293]
gi|66850937|gb|EAL91263.1| exosome complex subunit Csl4, putative [Aspergillus fumigatus
Af293]
Length = 249
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 98/223 (43%), Gaps = 58/223 (26%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG----------------------LLR 47
L PG+ LG + AG G +V N +YAS+ G L R
Sbjct: 8 LAIPGQRLGPVSSYSAGPGTHV--QNANIYASIAGPVVLQQAQPSSKLKSILSVSRNLPR 65
Query: 48 TLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV-------- 99
P + + T + +P S+V+ARVT+V R A+ I+ V
Sbjct: 66 KTDPSTSTTPMKATTTTKPKLRYNTLPAVDSIVLARVTRVQKRQATVSILVVLDESAGSQ 125
Query: 100 --------------------------GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRP 133
+ S +F +IR++DVRA E D+V M FR
Sbjct: 126 DPDPSKTASDNDNIVSILASAANPENHSNSDELRFQALIRKEDVRAVEKDRVVMDEMFRV 185
Query: 134 GDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
GDIVR SV+SLGD Y+L+TA+NDLGVV A S AG +++ +S
Sbjct: 186 GDIVRGSVISLGDQSFYYLTTARNDLGVVMARSEAGNMMFPVS 228
>gi|291510252|gb|ADE10082.1| S1 CSL4 [Tremella fuciformis]
Length = 190
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 89/161 (55%), Gaps = 15/161 (9%)
Query: 24 KAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIAR 83
K G G Y ++ G + +++ G P D V V G + VP+ ++VI
Sbjct: 24 KCGPGCY--EYEGRILSNIVG-----RPKRDGA----VVSVVGRE-EAAVPDVDAIVIGM 71
Query: 84 VTKVMTRMASADIMCVGAKSV---REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRAS 140
VT++ + A I V + V E F+G++R D+R TE DK+ M FR GD+V+A
Sbjct: 72 VTRLTPQQAVVTIEVVNDRPVPETSEAFTGVVRIADIRLTERDKIKMAECFRLGDMVKAK 131
Query: 141 VLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
VLSLGDAR+Y+LSTA N+LGV+ A S AG + IS D+
Sbjct: 132 VLSLGDARSYYLSTAANELGVIYATSEAGNPMVPISYQDME 172
>gi|405120343|gb|AFR95114.1| exosome 3'->5 exonuclease subunit ski4 [Cryptococcus neoformans
var. grubii H99]
Length = 191
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 24 KAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIAR 83
K GKG Y + NG + AS+ G R V V G + + S+VI
Sbjct: 24 KCGKGCY--ERNGQIVASVVGRPRR---------DGAVVSVVGREETVGTVDVDSIVIGV 72
Query: 84 VTKVMTRMASADIMCVGAKSV---REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRAS 140
++++ + A + + + + E F+G+IR D+R TE DKV M FR GDIV+A
Sbjct: 73 ISRLTPQQAHVTLTTLADRPLPESSEDFTGLIRIADIRLTERDKVKMGECFRLGDIVKAK 132
Query: 141 VLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
VLSLGDAR+Y+LSTA N+LGVV A+S AG + +S ++
Sbjct: 133 VLSLGDARSYYLSTAANELGVVYAKSEAGNPLLPVSYQEME 173
>gi|156839158|ref|XP_001643273.1| hypothetical protein Kpol_1015p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156113876|gb|EDO15415.1| hypothetical protein Kpol_1015p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 287
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 36/140 (25%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSV---------------------------- 104
+P+ G +V+A+VT++ + A+ +I+ V + V
Sbjct: 122 LPKEGDIVLAKVTRISLQRANLEILAVENQPVPIDSGVGSNGHGVVAAGGGSGSSKFSVA 181
Query: 105 ------REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKND 158
E F GI+R QDVRATE D+V + +F+PGDI+RA VLSLGD Y+L+TA+ND
Sbjct: 182 QTSSDFGEPFRGILRSQDVRATERDRVKLIENFKPGDIIRAQVLSLGDGTNYYLTTARND 241
Query: 159 LGVVSAEST--AGKLVYCIS 176
LGVV A+S AG L+Y +
Sbjct: 242 LGVVFAKSDNGAGNLMYALD 261
>gi|119478244|ref|XP_001259333.1| 3'-5' exoribonuclease (Csl4), putative [Neosartorya fischeri NRRL
181]
gi|119407487|gb|EAW17436.1| 3'-5' exoribonuclease (Csl4), putative [Neosartorya fischeri NRRL
181]
Length = 249
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 97/223 (43%), Gaps = 58/223 (26%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG----------------------LLR 47
L PG+ LG + AG G +V N +YAS+ G L R
Sbjct: 8 LAIPGQRLGPVSSYSAGPGTHV--QNANIYASIAGPVVVQQAQPSSKVKSILSVSRNLPR 65
Query: 48 TLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV-------- 99
P + T + +P S+V+ARVT+V R A+ I+ V
Sbjct: 66 KTDPSTSTTPAYTTTTTKPKLRYNTLPAVDSIVLARVTRVQKRQATVSILVVLDESAGSQ 125
Query: 100 --------------------------GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRP 133
+ S +F +IR++DVRA E D+V M FR
Sbjct: 126 NPDPSKTASDNDNIVSILTSAANPENHSSSDELRFQALIRKEDVRAVEKDRVVMDEMFRV 185
Query: 134 GDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
GDIVR SV+SLGD Y+L+TA+NDLGVV A S AG +++ +S
Sbjct: 186 GDIVRGSVISLGDQSFYYLTTARNDLGVVMARSEAGNMMFPVS 228
>gi|363754907|ref|XP_003647669.1| hypothetical protein Ecym_6482 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891306|gb|AET40852.1| hypothetical protein Ecym_6482 [Eremothecium cymbalariae
DBVPG#7215]
Length = 292
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 80/137 (58%), Gaps = 34/137 (24%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCV-----------GAK------------------- 102
+P+ G +V+ RVT++ + A+ +I+ V G+K
Sbjct: 134 LPKEGDIVLTRVTRISLQRANVEILAVENNASPIDSGCGSKGSNPLAPKGGSTSFSISQA 193
Query: 103 --SVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLG 160
+ E F G+IR QDVRA++ D+V + SF+PGDIVRA VLSLGD Y+++TA+NDLG
Sbjct: 194 SSDLGETFRGVIRAQDVRASDRDRVKITESFKPGDIVRAQVLSLGDGSNYYMTTARNDLG 253
Query: 161 VVSAEST--AGKLVYCI 175
VV A+++ AG+L+Y I
Sbjct: 254 VVFAKASNGAGELMYAI 270
>gi|406602728|emb|CCH45686.1| Exosome complex component CSL4 [Wickerhamomyces ciferrii]
Length = 289
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 76/140 (54%), Gaps = 37/140 (26%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCV--------------------------------- 99
+P+ G +V++RVTK+ + A +I+ V
Sbjct: 128 LPKEGDIVLSRVTKLNLKQAFVEILAVEGSGNVLTDSGIGSNGHGIIAPGGGSGAATFSI 187
Query: 100 --GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKN 157
+ + E F GIIR QDVR+T+ DKV + SF+PGDI+RA +LSLGD Y+L+T++N
Sbjct: 188 HQASSDLGETFKGIIRSQDVRSTDRDKVKIIESFKPGDIIRAQILSLGDGTNYYLTTSRN 247
Query: 158 DLGVVSAES--TAGKLVYCI 175
DLGVV A+S AG L+Y I
Sbjct: 248 DLGVVYAKSYNGAGGLMYAI 267
>gi|149244958|ref|XP_001527013.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449407|gb|EDK43663.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 314
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 8/119 (6%)
Query: 65 TGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
G +H +P G S + V + ++A I +G E F GIIR QD+R+TE D
Sbjct: 181 NGATSHASLPAGGGSQHNFNIQSVASNTSNAQIYDIG-----ENFRGIIRSQDIRSTERD 235
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAEST--AGKLVYCISKYDL 180
+V + F+PGDIVRA +LSLGD + Y+LSTAKN+LGVV A+S AG L+Y I ++
Sbjct: 236 RVVVGECFKPGDIVRAQILSLGDGQNYYLSTAKNNLGVVFAKSEGGAGSLMYPIDWQNM 294
>gi|448111858|ref|XP_004201947.1| Piso0_001413 [Millerozyma farinosa CBS 7064]
gi|359464936|emb|CCE88641.1| Piso0_001413 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 65 TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDK 124
G +H V G + T +S ++ + + E F GIIR QD+R+TE DK
Sbjct: 162 NGESSHKSVSASGGT--QSLNNYSTVASSNSLINATSADLGETFKGIIRVQDIRSTERDK 219
Query: 125 VDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAEST--AGKLVYCI 175
V + SFRPGDIVRA ++SLGD Y+LSTA+NDLGV+ A+S AG L++ I
Sbjct: 220 VKIIDSFRPGDIVRAQIISLGDGSNYYLSTARNDLGVIYAKSEGGAGDLMFAI 272
>gi|126137948|ref|XP_001385497.1| exosome 3'->5 exonuclease subunit ski4 (Csl4) [Scheffersomyces
stipitis CBS 6054]
gi|126092775|gb|ABN67468.1| exosome 3'->5 exonuclease subunit ski4 (Csl4) [Scheffersomyces
stipitis CBS 6054]
Length = 294
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 73/115 (63%), Gaps = 7/115 (6%)
Query: 65 TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKS--VREKFSGIIRQQDVRATEI 122
G AH +P G ++ +AS+ +GA+S + E F GIIR QD+R+T+
Sbjct: 160 NGELAHDSLPAGGG---SQNLSNHQTIASSQATALGAQSNDIGENFKGIIRSQDIRSTDR 216
Query: 123 DKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA--ESTAGKLVYCI 175
DKV + S++PGDIVRA ++SLGD Y+LSTA+NDLGV+ A E+ +G L+Y I
Sbjct: 217 DKVKVIDSYKPGDIVRALIISLGDGSNYYLSTARNDLGVIFAKSENGSGNLMYPI 271
>gi|365988228|ref|XP_003670945.1| hypothetical protein NDAI_0F03840 [Naumovozyma dairenensis CBS 421]
gi|343769716|emb|CCD25702.1| hypothetical protein NDAI_0F03840 [Naumovozyma dairenensis CBS 421]
Length = 301
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 78/145 (53%), Gaps = 36/145 (24%)
Query: 67 HKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSV---------------------- 104
K +P+ G +V+ RVT++ + A+ +I+ V ++V
Sbjct: 135 DKFANNLPKEGDIVLTRVTRISLQRANVEILAVENQNVPVDSGIGSNGSGIVAACGGSGA 194
Query: 105 ------------REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFL 152
E F G+IR QDVRATE D+V + SF+PGDIVRA VLSLGD Y+L
Sbjct: 195 STFSVSQVSSDLGETFRGLIRSQDVRATERDRVKIIDSFKPGDIVRAQVLSLGDGTNYYL 254
Query: 153 STAKNDLGVVSAEST--AGKLVYCI 175
+TA+NDLGVV A++ AG L+Y +
Sbjct: 255 TTARNDLGVVFAKAANGAGGLMYAL 279
>gi|50307887|ref|XP_453937.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643071|emb|CAH01033.1| KLLA0D19701p [Kluyveromyces lactis]
Length = 297
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 79/139 (56%), Gaps = 36/139 (25%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCV-------------------------GAKS---- 103
+P+ G +V+ARVT++ + + +I+ V GA +
Sbjct: 137 LPQEGDIVLARVTRISLQRITVEILAVENSPLPIDSGVGSNGTGIIAAAGGSGASTFSVS 196
Query: 104 -----VREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKND 158
+ E F GIIR QDVRAT+ D+V + SF+PGDI+RA VLSLGD Y+L+TA+ND
Sbjct: 197 QVSADLGETFRGIIRSQDVRATDRDRVKVMESFKPGDIIRAQVLSLGDGTHYYLTTARND 256
Query: 159 LGVVSAEST--AGKLVYCI 175
LGVV A+S+ AG+ +Y I
Sbjct: 257 LGVVFAKSSNGAGEQMYAI 275
>gi|259480509|tpe|CBF71706.1| TPA: CorA family metal ion transporter, putative (AFU_orthologue;
AFUA_5G13530) [Aspergillus nidulans FGSC A4]
Length = 246
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 105/220 (47%), Gaps = 55/220 (25%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRP-TVEVTGHK 68
L PG+ LG A AG G +V ++ +YAS+ G + S +SP + +V T K
Sbjct: 8 LAIPGQRLGPAGTYSAGPGTHV--YHSHIYASIAGPVSVDSAQVNSPAKSIISVSRTMKK 65
Query: 69 AHGP----------VPEP--------GSVVIARVTKVMTRMASADIMCVGAKSVRE---- 106
A VP+P SVV+ARVT+V R A+ I+ V +S
Sbjct: 66 AIAAASTSTSSTTTVPKPKYNTLPAVDSVVLARVTRVQKRQATVSILVVLDESASSQALN 125
Query: 107 ------------------------------KFSGIIRQQDVRATEIDKVDMHLSFRPGDI 136
+F +IR++DVRA E D+V + FR GDI
Sbjct: 126 PSQSASDNDNIESILASAANPENHSSSDELRFQALIRKEDVRAVEKDRVVLDEMFRVGDI 185
Query: 137 VRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
VR +V+SLGD Y+++TA+NDLGVV A S AG +++ +S
Sbjct: 186 VRGTVISLGDQSYYYITTARNDLGVVMARSEAGNMMFPVS 225
>gi|308805945|ref|XP_003080284.1| exoribonuclease-related (ISS) [Ostreococcus tauri]
gi|116058744|emb|CAL54451.1| exoribonuclease-related (ISS) [Ostreococcus tauri]
Length = 182
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 67/101 (66%), Gaps = 3/101 (2%)
Query: 67 HKAHGP--VPEPGSVVIARVTKVMTRMASADIMCVGAKS-VREKFSGIIRQQDVRATEID 123
+A GP VP G V RV +V+ R A DI + ++ V F+G IR+QDVRA +D
Sbjct: 47 ERARGPLVVPRVGDDVHGRVLRVLERAAHVDIAAINGRAPVGGGFAGTIRRQDVRAHAVD 106
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
V++ FR GD+VRA VLSLGDAR+++L+TA ++LGVV A
Sbjct: 107 SVELDRCFRAGDVVRAKVLSLGDARSFYLTTASDELGVVRA 147
>gi|194761250|ref|XP_001962842.1| GF14226 [Drosophila ananassae]
gi|190616539|gb|EDV32063.1| GF14226 [Drosophila ananassae]
Length = 202
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 90/160 (56%), Gaps = 8/160 (5%)
Query: 6 EEMVLVTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV 64
EE ++ PGE L + + + G G Y + NG +YAS +G++ +S + V V
Sbjct: 6 EETIVCLPGERLCRIEDNIVLGVGTY--EQNGYIYASKSGIVNI----EESGENCQVVNV 59
Query: 65 TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDK 124
H +P G +V ARV + I CV + + G++R++DVR TE D+
Sbjct: 60 HKPGFHLTIPTTGDIVTARVLVTTPKFVKCAIFCVRNVLLENSYRGLLRKEDVRETEKDR 119
Query: 125 VDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
VD++ SF+PGD++ A V++ + +++ L+TA+N+LGVV A
Sbjct: 120 VDIYKSFKPGDVILARVINQME-QSFLLTTAENELGVVIA 158
>gi|332375869|gb|AEE63075.1| unknown [Dendroctonus ponderosae]
Length = 199
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 12/166 (7%)
Query: 7 EMVLVTPGEVLGKATEV-KAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQR--PTVE 63
E + PG+ L V G+G Y + G +Y+ L G + D D+ +E
Sbjct: 2 ENPICLPGQRLSICDNVYTCGQGTY--QRQGYIYSMLAGTV-------DLVDRNGVKVIE 52
Query: 64 VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
V + G +V A+V + + A I C+G+ +R + G+IR++++RATE D
Sbjct: 53 VHSTGEQTVISTQGDIVTAQVYIITQQFAKCYIKCIGSTVLRSPYRGLIRRENIRATEKD 112
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAG 169
K ++ S RPGDIV A VL + +A +Y LSTA+N+LGVV A S G
Sbjct: 113 KTEVFKSLRPGDIVLARVLPMTEAHSYQLSTAENELGVVIAHSEHG 158
>gi|195384852|ref|XP_002051126.1| GJ14547 [Drosophila virilis]
gi|194147583|gb|EDW63281.1| GJ14547 [Drosophila virilis]
Length = 214
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 KEEEMVLVTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTV 62
E+E+++ PGE L + + + G+G Y + G +YA +G++ D ++ +
Sbjct: 14 NEDEILICLPGERLCRVEDNIIVGQGTY--EQGGYIYACKSGIVHI-----DETTEKCQI 66
Query: 63 EVTGHKA--HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRAT 120
V+ HK H +P G VV ARV + A I CVG + + G++R++DVR T
Sbjct: 67 -VSVHKPGFHLTIPATGDVVTARVLVTTPKFAKCAIFCVGNVLLESSYRGLLRKEDVRET 125
Query: 121 EIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
E D+VD++ SF+PGD++ A V++ + +++ LSTA+ +LGVV A
Sbjct: 126 EKDRVDIYKSFKPGDVILARVVNQME-QSFMLSTAEAELGVVVA 168
>gi|294654683|ref|XP_456747.2| DEHA2A09570p [Debaryomyces hansenii CBS767]
gi|199429067|emb|CAG84708.2| DEHA2A09570p [Debaryomyces hansenii CBS767]
Length = 298
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 74/119 (62%), Gaps = 6/119 (5%)
Query: 65 TGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
G AH +P G S ++ T + ++ +S + + A + E F GIIR QDVR+T+ D
Sbjct: 164 NGENAHRSIPAGGGSQSLSSHTTIASQASSINAV---ASDLGETFKGIIRTQDVRSTDRD 220
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA--ESTAGKLVYCISKYDL 180
+V + F+PGDIVRA ++SLGD Y+LSTAKNDLGVV A E AG L+Y + ++
Sbjct: 221 RVKIIECFKPGDIVRAVIISLGDGSNYYLSTAKNDLGVVFARSEGGAGGLMYAVDWQNM 279
>gi|315042109|ref|XP_003170431.1| 3'-5' exoribonuclease CSL4 [Arthroderma gypseum CBS 118893]
gi|311345465|gb|EFR04668.1| 3'-5' exoribonuclease CSL4 [Arthroderma gypseum CBS 118893]
Length = 246
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 104/223 (46%), Gaps = 61/223 (27%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG--LLR----------------TLSP 51
+ PG LG ++ +G G YV + +YAS+ G +L+ T+S
Sbjct: 8 IAVPGLCLGNSSAYISGPGTYV--RDSSIYASIAGPVILKSDDKETDPKRKPRKILTVSR 65
Query: 52 PPDSPDQRPTVEVTGHKAHGPV-----PEPGSVVIARVTKVMTRMASADIMCV------- 99
P + + PT + + P+ P S+V+ARVT+V R A+ I+ V
Sbjct: 66 SPQTDTRNPTQK---QQTKSPLKFNTLPAVDSIVLARVTRVQKRQATVSILMVVDDQNND 122
Query: 100 -------------------GAKSVRE-------KFSGIIRQQDVRATEIDKVDMHLSFRP 133
G S +F IIR++DVRA E D+V M FR
Sbjct: 123 LIDTDMRSILSSAPIITTAGTDSTSTSNTADDLRFQAIIRKEDVRAVEKDRVVMEDMFRV 182
Query: 134 GDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
GDIVRA V+S+GD +Y+ STA+N+LGVV A S G +++ IS
Sbjct: 183 GDIVRAYVISVGDQSSYYCSTARNELGVVMARSEGGNMMFPIS 225
>gi|50291197|ref|XP_448031.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527342|emb|CAG60982.1| unnamed protein product [Candida glabrata]
Length = 285
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 76/139 (54%), Gaps = 36/139 (25%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCV--------------GAKSVR------------- 105
+P+ G VV+ARVT++ + + +I+ V GA V
Sbjct: 122 LPKEGDVVLARVTRISAQKVNVEILAVENEPIPLDSGVGSNGAGKVAPGGGSGASTFSVS 181
Query: 106 -------EKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKND 158
E F G+IR QD+RATE D+V + S++PGDI+RA +LSLGD Y+L+TA+ND
Sbjct: 182 QASSDLGETFRGMIRSQDIRATERDRVKVIESYKPGDIIRAQILSLGDGNNYYLTTARND 241
Query: 159 LGVVSAEST--AGKLVYCI 175
LGVV A S AG L+Y +
Sbjct: 242 LGVVFARSDNGAGGLMYAV 260
>gi|452821225|gb|EME28258.1| exosome complex component CSL4 [Galdieria sulphuraria]
Length = 174
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 9 VLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLR----------TLSPPPDSPDQ 58
+ PG L + G G Y VYASL G + + P + Q
Sbjct: 11 MFAVPGMELSEQGNFSIGTGCYCLHQR--VYASLWGRVSFQETGEANSLRIDIQPRTRSQ 68
Query: 59 RPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVR 118
R T VP G VI +V KV R +I + K + F G++R DV
Sbjct: 69 RSTC----------VPTVGDEVIGKVLKVTWRAVVVEIFAIQEKLLCYTFRGVVRLPDVA 118
Query: 119 ATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTA 168
T DK+D+H FRPGDI+RA V+SLGD +AY+LST+++ GV+ A S+A
Sbjct: 119 TTSSDKIDLHNCFRPGDIIRAQVVSLGDPQAYYLSTSRSCDGVIYAMSSA 168
>gi|390345696|ref|XP_784628.3| PREDICTED: probable ATP-dependent RNA helicase DHX34-like
[Strongylocentrotus purpuratus]
Length = 659
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 58/70 (82%)
Query: 100 GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDL 159
G +++ F G+IR++D+RATE DKV+++ SFRPGDIV A VLSLGDA++Y L+TA+N+L
Sbjct: 554 GRAGIKKLFRGMIRKEDIRATEKDKVEVYKSFRPGDIVLARVLSLGDAQSYLLTTAENEL 613
Query: 160 GVVSAESTAG 169
GVV A+S AG
Sbjct: 614 GVVLAKSEAG 623
>gi|401624003|gb|EJS42080.1| csl4p [Saccharomyces arboricola H-6]
Length = 292
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 83/159 (52%), Gaps = 38/159 (23%)
Query: 51 PPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAK-------- 102
P PD D T + +G++ +P+ G +V+ RVT++ + A+ +I+ V K
Sbjct: 112 PGPD--DDYKTNKDSGNEFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPVDSGV 169
Query: 103 --------------------------SVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDI 136
+ E F GIIR QDVR+T+ D+V + F+PGDI
Sbjct: 170 GSNGVGIVAAGGGSGAATFSVSQASSDLGESFRGIIRSQDVRSTDRDRVKVIDCFKPGDI 229
Query: 137 VRASVLSLGDARAYFLSTAKNDLGVV--SAESTAGKLVY 173
VRA VLSLGD Y+L+TA+NDLGVV A + AG L+Y
Sbjct: 230 VRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMY 268
>gi|195030438|ref|XP_001988075.1| GH10967 [Drosophila grimshawi]
gi|193904075|gb|EDW02942.1| GH10967 [Drosophila grimshawi]
Length = 214
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 8/163 (4%)
Query: 1 MVVKEEEMVLVTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQR 59
M EE++++ PGE L + + V G+G Y + G +YA +G++ DS ++
Sbjct: 11 MSPNEEDLLICLPGERLCRVEDNVIVGEGTY--EQGGYIYACKSGIVNI----DDSTEKC 64
Query: 60 PTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRA 119
V V H +P G VV ARV + A I CV + + G++R++DVR
Sbjct: 65 QIVSVHKPGFHLTIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRE 124
Query: 120 TEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVV 162
TE D+VD++ SF+PGDI+ A V++ + +++ LSTA+ +LGVV
Sbjct: 125 TEKDRVDIYKSFKPGDIILARVINQME-QSFTLSTAEAELGVV 166
>gi|58266496|ref|XP_570404.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134111194|ref|XP_775739.1| hypothetical protein CNBD4680 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258403|gb|EAL21092.1| hypothetical protein CNBD4680 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226637|gb|AAW43097.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 191
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 24 KAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIAR 83
K GKG Y + NG + AS+ G R V V G + + S+VI
Sbjct: 24 KCGKGCY--ERNGQILASVVGRPRR---------DGAVVSVIGREETVGTVDVDSIVIGV 72
Query: 84 VTKVMTRMASADIMCVGAKSV---REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRAS 140
++++ + A + + + + E F+G+IR D+R TE DKV M FR GDIV+A
Sbjct: 73 ISRLTPQQAHMTLTTLSDRPLPESSEDFTGLIRIADIRLTERDKVKMGECFRLGDIVKAK 132
Query: 141 VLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
VLSLGDAR+Y+LSTA ++LGVV A+S AG + +S ++
Sbjct: 133 VLSLGDARSYYLSTAADELGVVYAKSEAGNPLLPVSYQEME 173
>gi|409051718|gb|EKM61194.1| hypothetical protein PHACADRAFT_156409 [Phanerochaete carnosa
HHB-10118-sp]
Length = 168
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 71/110 (64%), Gaps = 2/110 (1%)
Query: 74 PEPGSVVIARVTKVMTRMASADIMCVGAKSVR--EKFSGIIRQQDVRATEIDKVDMHLSF 131
P P +VV+ +T++ A I V + E+F+G+IR QDVRATE DKV + F
Sbjct: 41 PAPNTVVLGTITRLSPLQAVLSITVVDGVPLPPGEEFTGVIRVQDVRATEKDKVKIADCF 100
Query: 132 RPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
R GD+V+ V+SLGDAR+Y+++TA+NDLGV+ A S AG + +S ++
Sbjct: 101 RGGDVVKGLVISLGDARSYYVTTARNDLGVIFATSEAGATMEPVSWQEMR 150
>gi|195472096|ref|XP_002088338.1| Csl4 [Drosophila yakuba]
gi|194174439|gb|EDW88050.1| Csl4 [Drosophila yakuba]
Length = 203
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 93/167 (55%), Gaps = 8/167 (4%)
Query: 5 EEEMVLVTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVE 63
++E V+ PGE L + + + G G + + NG +YAS +G++ +S + V
Sbjct: 4 QDETVVCLPGERLCRTEDNIVLGIGTF--EQNGYIYASKSGIVHI----EESGENCQVVS 57
Query: 64 VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
V H +P G VV ARV + I CV + + G++R++DVR TE D
Sbjct: 58 VHKPGFHLTIPATGDVVTARVLVTTPKFVKCAIFCVRNVLLESSYRGLLRKEDVRETEKD 117
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
+VD++ SFRPGD++ A V++ + + + L+TA+N+LGVV A ++ +
Sbjct: 118 RVDIYKSFRPGDVILARVINQLE-QTFLLTTAENELGVVIAYASDNR 163
>gi|403412277|emb|CCL98977.1| predicted protein [Fibroporia radiculosa]
Length = 185
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 71/110 (64%), Gaps = 2/110 (1%)
Query: 74 PEPGSVVIARVTKVMTRMASADIMCVGA--KSVREKFSGIIRQQDVRATEIDKVDMHLSF 131
P P S+V+ +T++ + A I V + E+F G++R QDVRATE DKV + F
Sbjct: 58 PSPNSIVLGSITRLSPQQAVLSIAVVDGVPLAAGEEFVGVVRVQDVRATEKDKVKIADCF 117
Query: 132 RPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
R GD+V+ V+SLGDAR+Y+++TA+NDLGV+ A S AG + +S ++
Sbjct: 118 RGGDVVKGLVISLGDARSYYVTTARNDLGVIFATSEAGATMEPVSWQEMR 167
>gi|38048131|gb|AAR09968.1| similar to Drosophila melanogaster CG6249, partial [Drosophila
yakuba]
Length = 200
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 93/167 (55%), Gaps = 8/167 (4%)
Query: 5 EEEMVLVTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVE 63
++E V+ PGE L + + + G G + + NG +YAS +G++ +S + V
Sbjct: 1 QDETVVCLPGERLCRTEDNIVLGIGTF--EQNGYIYASKSGIVHI----EESGENCQVVS 54
Query: 64 VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
V H +P G VV ARV + I CV + + G++R++DVR TE D
Sbjct: 55 VHKPGFHLTIPATGDVVTARVLVTTPKFVKCAIFCVRNVLLESSYRGLLRKEDVRETEKD 114
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
+VD++ SFRPGD++ A V++ + + + L+TA+N+LGVV A ++ +
Sbjct: 115 RVDIYKSFRPGDVILARVINQLE-QTFLLTTAENELGVVIAYASDNR 160
>gi|198474701|ref|XP_001356791.2| GA19469 [Drosophila pseudoobscura pseudoobscura]
gi|198138507|gb|EAL33857.2| GA19469 [Drosophila pseudoobscura pseudoobscura]
Length = 205
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 90/161 (55%), Gaps = 8/161 (4%)
Query: 5 EEEMVLVTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVE 63
+E V+ PGE L + + V G G Y + NG +YAS +G++ +S + V
Sbjct: 6 DENTVVCLPGERLCRVEDNVVLGIGTY--EQNGYIYASKSGVVNI----EESGENCQVVS 59
Query: 64 VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
V H +P G VV ARV + A I CV + + G++R++DVR TE D
Sbjct: 60 VHKPGFHLTIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRETEKD 119
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
+VD++ SF+PGD++ A V++ + +++ L+TA+ +LGVV A
Sbjct: 120 RVDIYKSFKPGDVILARVINQME-QSFLLTTAETELGVVVA 159
>gi|254584610|ref|XP_002497873.1| ZYRO0F15488p [Zygosaccharomyces rouxii]
gi|238940766|emb|CAR28940.1| ZYRO0F15488p [Zygosaccharomyces rouxii]
Length = 294
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 73/139 (52%), Gaps = 36/139 (25%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSV---------------------------- 104
+P+ +V+ARVT++ + A+ +I+ V + V
Sbjct: 133 LPKENDIVLARVTRISPQRANVEILAVENRPVPKDSGVGSNGSGVVAAGGGSGAVTFSVS 192
Query: 105 ------REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKND 158
E F GIIR QDVRATE D V M S++PGDIVRA VLSLGD Y+L+TAKN+
Sbjct: 193 QASSDLGETFRGIIRSQDVRATERDSVKMIESYKPGDIVRAQVLSLGDGTNYYLTTAKNE 252
Query: 159 LGVVSAESTAGK--LVYCI 175
LGVV A + G L+Y I
Sbjct: 253 LGVVFARAANGAAGLMYAI 271
>gi|195118728|ref|XP_002003888.1| GI18151 [Drosophila mojavensis]
gi|193914463|gb|EDW13330.1| GI18151 [Drosophila mojavensis]
Length = 214
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 96/164 (58%), Gaps = 12/164 (7%)
Query: 4 KEEEMVLVTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTV 62
E++M++ PG+ L + + + G+G Y + G +YAS +G++ D +++ +
Sbjct: 14 NEDDMLICLPGDRLCRVEDNIVVGQGTY--EQGGYIYASKSGIINI-----DESNEKCQI 66
Query: 63 EVTGHKA--HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRAT 120
V+ HK H +P G VV ARV + A I CV + + G++R++DVR T
Sbjct: 67 -VSVHKPGFHLTIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRET 125
Query: 121 EIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
+ D+VD++ SF+PGD++ A V++ + +++ LSTA+ +LGVV A
Sbjct: 126 DKDRVDIYKSFKPGDVILARVVNQME-QSFMLSTAEAELGVVVA 168
>gi|422294187|gb|EKU21487.1| exosome complex component CSL4 [Nannochloropsis gaditana CCMP526]
Length = 196
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 65/90 (72%)
Query: 77 GSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDI 136
G VV RV ++ ++ A +I+ +G+ +R+ GII+++DV +ID++++ FRPGDI
Sbjct: 62 GHVVTTRVLRITSKQAYVEILALGSVVLRQTCQGIIKKEDVSDHDIDRIEIPRCFRPGDI 121
Query: 137 VRASVLSLGDARAYFLSTAKNDLGVVSAES 166
VRA V+SLGD+R Y+L TA+++LGVV A S
Sbjct: 122 VRARVVSLGDSRQYYLKTAESELGVVYARS 151
>gi|397510699|ref|XP_003825729.1| PREDICTED: exosome complex component CSL4 [Pan paniscus]
Length = 184
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 84/158 (53%), Gaps = 18/158 (11%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLMKSS----ENGALPVVSVVRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR V+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIR-----------VEIYKSFR 112
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 113 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 150
>gi|366995217|ref|XP_003677372.1| hypothetical protein NCAS_0G01320 [Naumovozyma castellii CBS 4309]
gi|342303241|emb|CCC71019.1| hypothetical protein NCAS_0G01320 [Naumovozyma castellii CBS 4309]
Length = 268
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 73/138 (52%), Gaps = 36/138 (26%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSV---------------------------- 104
+P+ G +V+ RVT++ + A+ +I+ V +V
Sbjct: 108 LPKEGDIVLTRVTRISLQRANVEILAVENANVPVDSGVGSNGSGIVAAGGGSGAATFSVS 167
Query: 105 ------REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKND 158
E F G+IR QDVRATE D+V + F+PGDIVRA VLSLGD Y+L+TA+ND
Sbjct: 168 QVSSDLGETFRGLIRSQDVRATERDRVKIMDCFKPGDIVRAQVLSLGDGTNYYLTTARND 227
Query: 159 LGVV--SAESTAGKLVYC 174
LGVV A + AG L+Y
Sbjct: 228 LGVVFARAANGAGGLMYA 245
>gi|444315450|ref|XP_004178382.1| hypothetical protein TBLA_0B00180 [Tetrapisispora blattae CBS 6284]
gi|387511422|emb|CCH58863.1| hypothetical protein TBLA_0B00180 [Tetrapisispora blattae CBS 6284]
Length = 298
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 74/139 (53%), Gaps = 36/139 (25%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSV---------------------------- 104
+P+ GS+V+ +VT++ + A+ +I+ V V
Sbjct: 138 LPKEGSIVLGKVTRITLQRANLEILAVENNPVPIDSGIGSNGSGVIASGGGSGSAMYSVA 197
Query: 105 ------REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKND 158
E F GI+R QDVRATE D V M ++PGDIVRA VLSLGD Y+++TA+ND
Sbjct: 198 QISSDYSEPFRGILRSQDVRATERDSVKMVDCYKPGDIVRAQVLSLGDGTNYYVTTARND 257
Query: 159 LGVVSAEST--AGKLVYCI 175
LGVV A++ AG L+Y I
Sbjct: 258 LGVVFAKAANGAGGLMYAI 276
>gi|195148326|ref|XP_002015125.1| GL18587 [Drosophila persimilis]
gi|194107078|gb|EDW29121.1| GL18587 [Drosophila persimilis]
Length = 205
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 93/167 (55%), Gaps = 8/167 (4%)
Query: 5 EEEMVLVTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVE 63
+E V+ PGE L + + V G G Y + NG +YAS +G++ +S + V
Sbjct: 6 DENTVVCLPGERLCRVEDNVVLGIGTY--EQNGYIYASKSGVVNI----EESGENCQVVS 59
Query: 64 VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
V H +P G VV ARV + A I CV + + G++R++DVR TE D
Sbjct: 60 VHKPGFHLTIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRETEKD 119
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
+VD++ SF+PGD++ A V++ + +++ ++TA+ +LGVV A ++ +
Sbjct: 120 RVDIYKSFKPGDVILARVINQME-QSFLITTAETELGVVVAYASDAR 165
>gi|302497299|ref|XP_003010650.1| hypothetical protein ARB_03351 [Arthroderma benhamiae CBS 112371]
gi|291174193|gb|EFE30010.1| hypothetical protein ARB_03351 [Arthroderma benhamiae CBS 112371]
Length = 247
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 64/225 (28%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG--LLRT------------------L 49
+ PG LG ++ +G G YV + + AS+ G +L+T
Sbjct: 8 IAVPGLRLGDSSTFTSGPGTYV--RDSSICASIAGPVILKTDDNGTDPKRKPRKILTVSR 65
Query: 50 SPPPDSPDQRPTVEVTGHKAHGPV-----PEPGSVVIARVTKVMTRMASADIMCV----- 99
SP D+P+ PT +A P+ P S+V+ARVT+V R A+ I+ V
Sbjct: 66 SPQTDTPN--PTQR--QQQAKSPLKFNTLPAVDSIVLARVTRVQKRQATVSILMVVDDQN 121
Query: 100 ---------------------GAKSVRE-------KFSGIIRQQDVRATEIDKVDMHLSF 131
G S +F IIR++DVRA E D+V M F
Sbjct: 122 NDLIDTNMRTILSSAPIITTAGTDSTSTSNTADDLRFQAIIRKEDVRAVEKDRVVMEDMF 181
Query: 132 RPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
R GDIVRA V+S+GD +Y+ STA+N+LGVV A S G +++ +S
Sbjct: 182 RVGDIVRAYVISVGDQSSYYCSTARNELGVVMARSEGGNMMFPVS 226
>gi|170085259|ref|XP_001873853.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651405|gb|EDR15645.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 184
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%)
Query: 106 EKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAE 165
E+F+G+IR QDVRATE DKV + FR GD+VR V+SLGD R+YF++TA+NDLGV+ A
Sbjct: 91 EEFTGVIRTQDVRATEKDKVKIGDCFRGGDVVRGVVISLGDTRSYFVTTARNDLGVIFAT 150
Query: 166 STAGKLVYCISKYDLN 181
S AG + IS ++
Sbjct: 151 SEAGATLEPISWQEMR 166
>gi|255711742|ref|XP_002552154.1| KLTH0B08426p [Lachancea thermotolerans]
gi|238933532|emb|CAR21716.1| KLTH0B08426p [Lachancea thermotolerans CBS 6340]
Length = 281
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 75/139 (53%), Gaps = 36/139 (25%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKS----------------------------- 103
+P G +V+ARVT++ + A+ +I+ V K+
Sbjct: 121 LPREGDIVLARVTRISQQRANVEILAVENKTTPVDSGVGSNGAGIVAAGGGSGGATFSVS 180
Query: 104 -----VREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKND 158
+ E F G+I +DVRAT+ DKV + SFRPGDIVRA V+SLGD Y LSTA+ND
Sbjct: 181 QASSDLGETFRGLISSRDVRATDRDKVKIIDSFRPGDIVRAQVISLGDGSNYHLSTARND 240
Query: 159 LGVVSAEST--AGKLVYCI 175
LGVV A++ AG ++Y I
Sbjct: 241 LGVVFAKACNGAGGMMYAI 259
>gi|242761963|ref|XP_002340283.1| exosome complex subunit Csl4, putative [Talaromyces stipitatus ATCC
10500]
gi|218723479|gb|EED22896.1| exosome complex subunit Csl4, putative [Talaromyces stipitatus ATCC
10500]
Length = 259
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 102/230 (44%), Gaps = 68/230 (29%)
Query: 9 VLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG--LLRTLSPP-------------- 52
+L PG+ L + G G +V NG++ AS+ G + LS
Sbjct: 15 ILAVPGQQLAMTSTYLPGTGTHV--QNGIICASIPGPVFVEQLSQTKSKVTKSILSVLRS 72
Query: 53 ------PDSPDQRPTVEVTGHKA------------HGPVPEPGSVVIARVTKVMTRMASA 94
PD Q+ V+ H + +P S+V+ARVT+V R +
Sbjct: 73 GIGNIGPDGTVQK----VSAHTTTTTTATGTKRPKYNTLPAVDSIVLARVTRVQKRQVTL 128
Query: 95 DIMCV-----GAKSVRE-----------------------KFSGIIRQQDVRATEIDKVD 126
I+ V A V + +F +IR++DVRA E D+V
Sbjct: 129 SILVVLDDITAATQVSDNDNIAAILTSAANPENQSTSDELRFQALIRKEDVRAVEKDRVV 188
Query: 127 MHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
+ FR GDIVR SV+SLGD Y+L+TA+NDLGVV A S AG +++ +S
Sbjct: 189 LEEMFRVGDIVRGSVISLGDQSFYYLTTARNDLGVVMARSEAGNMMFPVS 238
>gi|327292632|ref|XP_003231014.1| exosome complex subunit Csl4 [Trichophyton rubrum CBS 118892]
gi|326466820|gb|EGD92273.1| exosome complex subunit Csl4 [Trichophyton rubrum CBS 118892]
Length = 247
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 101/221 (45%), Gaps = 56/221 (25%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG--LLRT------------------L 49
+ PG LG ++ +G G YV + + AS+ G +L+T
Sbjct: 8 IAVPGLRLGDSSTFSSGPGTYV--RDSSICASIPGPVILKTDDKGTDPKRKPRKILTVSR 65
Query: 50 SPPPDSPDQRPTVEVTGHKAH-GPVPEPGSVVIARVTKVMTRMASADIMCV--------- 99
SP D+P+ + T +P S+V+ARVT+V R A+ I+ V
Sbjct: 66 SPQTDTPNSTQNQQQTKSPLKFNTLPAVDSIVLARVTRVQKRQATVSILMVVDDQNNDLI 125
Query: 100 -----------------GAKSVRE-------KFSGIIRQQDVRATEIDKVDMHLSFRPGD 135
G S +F IIR++DVRA E D+V M FR GD
Sbjct: 126 DTNMRTILSSAPIITTAGTDSTSTSNTADDLRFQAIIRKEDVRAVEKDRVVMEDMFRVGD 185
Query: 136 IVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
IVRA V+S+GD +Y+ STA+N+LGVV A S G +++ +S
Sbjct: 186 IVRAYVISVGDQSSYYCSTARNELGVVMARSEGGNMMFPVS 226
>gi|413939466|gb|AFW74017.1| hypothetical protein ZEAMMB73_791647 [Zea mays]
Length = 116
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+VTPGE+LG + + AG+GAY + V AS+TG R + P P S DQR TVEV GHKA
Sbjct: 14 VVTPGELLGNSLTLAAGRGAYADGRS--VRASVTGRRRIVPPAPGSDDQRSTVEVVGHKA 71
Query: 70 HGPVPEPGSVVIARV 84
HG VP+PGSVVIARV
Sbjct: 72 HGAVPQPGSVVIARV 86
>gi|302662628|ref|XP_003022966.1| hypothetical protein TRV_02903 [Trichophyton verrucosum HKI 0517]
gi|291186940|gb|EFE42348.1| hypothetical protein TRV_02903 [Trichophyton verrucosum HKI 0517]
Length = 247
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 64/225 (28%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG--LLRT------------------L 49
+ PG LG ++ +G G YV + + AS+ G +L+T
Sbjct: 8 IAVPGLRLGDSSTFTSGPGTYV--RDSSICASIAGPVILKTDDKGTDPKRKPRKILTVSR 65
Query: 50 SPPPDSPDQRPTVEVTGHKAHGPV-----PEPGSVVIARVTKVMTRMASADIMCV----- 99
SP D+P+ PT + +A P+ P S+V+ARVT+V R A+ I+ V
Sbjct: 66 SPQTDTPN--PTQK--QQQAKSPLKFNTLPAVDSIVLARVTRVQKRQATVSILMVVDDQN 121
Query: 100 ---------------------GAKSVREK-------FSGIIRQQDVRATEIDKVDMHLSF 131
G S F IIR++DVRA E D+V M F
Sbjct: 122 NDLIDTNMRTILSSAPIITTAGTDSTSTSNTADDLWFQAIIRKEDVRAVEKDRVVMEDMF 181
Query: 132 RPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
R GDIVRA V+S+GD +Y+ STA+N+LGVV A S G +++ +S
Sbjct: 182 RVGDIVRAYVISVGDQSSYYCSTARNELGVVMARSEGGNMMFPVS 226
>gi|190409203|gb|EDV12468.1| 3'-5' exoribonuclease CSL4 [Saccharomyces cerevisiae RM11-1a]
gi|207341876|gb|EDZ69814.1| YNL232Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259149134|emb|CAY82376.1| Csl4p [Saccharomyces cerevisiae EC1118]
gi|323335876|gb|EGA77154.1| Csl4p [Saccharomyces cerevisiae Vin13]
gi|323346808|gb|EGA81087.1| Csl4p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763481|gb|EHN05009.1| Csl4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 292
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 36/157 (22%)
Query: 53 PDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAK---------- 102
P + R T + + +P+ G +V+ RVT++ + A+ +I+ V K
Sbjct: 112 PGTEKGRKTNKYANNDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPIDSGIGS 171
Query: 103 ------------------------SVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVR 138
+ E F GIIR QDVR+T+ D+V + F+PGDIVR
Sbjct: 172 NGSGIVAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVR 231
Query: 139 ASVLSLGDARAYFLSTAKNDLGVV--SAESTAGKLVY 173
A VLSLGD Y+L+TA+NDLGVV A + AG L+Y
Sbjct: 232 AQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMY 268
>gi|6324097|ref|NP_014167.1| Csl4p [Saccharomyces cerevisiae S288c]
gi|1730832|sp|P53859.1|CSL4_YEAST RecName: Full=Exosome complex component CSL4; AltName: Full=CEP1
synthetic lethal protein 4
gi|1183982|emb|CAA93366.1| N1154 [Saccharomyces cerevisiae]
gi|1302259|emb|CAA96137.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151944314|gb|EDN62592.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|256272377|gb|EEU07360.1| Csl4p [Saccharomyces cerevisiae JAY291]
gi|285814432|tpg|DAA10326.1| TPA: Csl4p [Saccharomyces cerevisiae S288c]
gi|349580716|dbj|GAA25875.1| K7_Csl4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 292
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 36/157 (22%)
Query: 53 PDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAK---------- 102
P + R T + + +P+ G +V+ RVT++ + A+ +I+ V K
Sbjct: 112 PGTEKGRKTNKYANNDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPIDSGIGS 171
Query: 103 ------------------------SVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVR 138
+ E F GIIR QDVR+T+ D+V + F+PGDIVR
Sbjct: 172 NGSGIVAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVR 231
Query: 139 ASVLSLGDARAYFLSTAKNDLGVV--SAESTAGKLVY 173
A VLSLGD Y+L+TA+NDLGVV A + AG L+Y
Sbjct: 232 AQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMY 268
>gi|326483544|gb|EGE07554.1| 3'-5' exoribonuclease CSL4 [Trichophyton equinum CBS 127.97]
Length = 247
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 56/221 (25%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG--LLRTL---SPPPDSP------DQ 58
+ PG LG ++ +G G YV + + AS+ G +L+T + P P +
Sbjct: 8 IAVPGLRLGDSSTFTSGPGTYV--RDSSICASIAGPVILKTDDRGTDPKRKPRKILTVSR 65
Query: 59 RPTVEVTGH-----KAHGPV-----PEPGSVVIARVTKVMTRMASADIMCV--------- 99
P + H +A P+ P S+V+ARVT+V R A+ I+ V
Sbjct: 66 SPQTDTPNHTQKQQQAKSPLKFNTLPAVDSIVLARVTRVQKRQATVSILMVIDDQNNDLI 125
Query: 100 -----------------GAKSVRE-------KFSGIIRQQDVRATEIDKVDMHLSFRPGD 135
G S +F IIR++DVRA E D+V M FR GD
Sbjct: 126 DTNMRTILSSAPIITTAGTDSTSTSNTADDLRFQAIIRKEDVRAVEKDRVVMEDMFRVGD 185
Query: 136 IVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
IVRA V+S+GD +Y+ STA+N+LGVV A S G +++ +S
Sbjct: 186 IVRAYVISVGDQSSYYCSTARNELGVVMARSEGGNMMFPVS 226
>gi|392297120|gb|EIW08221.1| Csl4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 292
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 36/157 (22%)
Query: 53 PDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAK---------- 102
P + R T + + +P+ G +V+ RVT++ + A+ +I+ V K
Sbjct: 112 PGTEKGRKTNKYANNDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPIDSGIGS 171
Query: 103 ------------------------SVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVR 138
+ E F GIIR QDVR+T+ D+V + F+PGDIVR
Sbjct: 172 NGSGIVAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVR 231
Query: 139 ASVLSLGDARAYFLSTAKNDLGVV--SAESTAGKLVY 173
A VLSLGD Y+L+TA+NDLGVV A + AG L+Y
Sbjct: 232 AQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMY 268
>gi|448262641|pdb|4IFD|I Chain I, Crystal Structure Of An 11-subunit Eukaryotic Exosome
Complex Bound To Rna
Length = 301
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 36/157 (22%)
Query: 53 PDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAK---------- 102
P + R T + + +P+ G +V+ RVT++ + A+ +I+ V K
Sbjct: 121 PGTEKGRKTNKYANNDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPIDSGIGS 180
Query: 103 ------------------------SVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVR 138
+ E F GIIR QDVR+T+ D+V + F+PGDIVR
Sbjct: 181 NGSGIVAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVR 240
Query: 139 ASVLSLGDARAYFLSTAKNDLGVV--SAESTAGKLVY 173
A VLSLGD Y+L+TA+NDLGVV A + AG L+Y
Sbjct: 241 AQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMY 277
>gi|326472645|gb|EGD96654.1| exosome complex subunit Csl4 [Trichophyton tonsurans CBS 112818]
Length = 247
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 56/221 (25%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG--LLRTL---SPPPDSP------DQ 58
+ PG LG ++ +G G YV + + AS+ G +L+T + P P +
Sbjct: 8 IAVPGLRLGDSSTFTSGPGTYV--RDSSICASIAGPVILKTDDRGTDPKRKPRKILTVSR 65
Query: 59 RPTVEVTGH-----KAHGPV-----PEPGSVVIARVTKVMTRMASADIMCV--------- 99
P + H +A P+ P S+V+ARVT+V R A+ I+ V
Sbjct: 66 SPQTDTPNHTQKQQQAKSPLKFNTLPAVDSIVLARVTRVQKRQATVSILMVIDDQNNDLI 125
Query: 100 -----------------GAKSVRE-------KFSGIIRQQDVRATEIDKVDMHLSFRPGD 135
G S +F IIR++DVRA E D+V M FR GD
Sbjct: 126 DTNMRTILSSAPIITTAGTDSTSTSNTADDLRFQAIIRKEDVRAVEKDRVVMEDMFRVGD 185
Query: 136 IVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
IVRA V+S+GD +Y+ STA+N+LGVV A S G +++ +S
Sbjct: 186 IVRAYVISVGDQSSYYCSTARNELGVVMARSEGGNMMFPVS 226
>gi|195434078|ref|XP_002065030.1| GK15242 [Drosophila willistoni]
gi|194161115|gb|EDW76016.1| GK15242 [Drosophila willistoni]
Length = 213
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 88/155 (56%), Gaps = 12/155 (7%)
Query: 13 PGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA-- 69
PGE L + + + G G Y + NG +YA +G++ D D+ + V+ HK
Sbjct: 22 PGERLCRVEDNIILGLGTY--EQNGYIYACKSGIVSI-----DDSDENTQI-VSVHKPGF 73
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
H +P G +V ARV + A I CV + + + G++R++DVR TE D+VD++
Sbjct: 74 HLTIPVTGDIVTARVLVTTPKFAKCAIFCVRNQLLENSYRGLLRKEDVRETEKDRVDIYK 133
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
SF+PGD++ A VL+ + ++ LSTA+ +LGVV A
Sbjct: 134 SFKPGDVILARVLNQLE-QSILLSTAETELGVVIA 167
>gi|94469354|gb|ABF18526.1| exosomal 3'-5' exoribonuclease complex subunit ski4 [Aedes aegypti]
Length = 211
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 91/162 (56%), Gaps = 8/162 (4%)
Query: 7 EMVLVTPGEVLGKATEVK-AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVT 65
E + PG+ L +E G+G Y + G ++ASL+G+++ ++ + V
Sbjct: 12 ESYICVPGQRLCAISEYTVGGEGTY--EKLGYLHASLSGVVKIRKRHKNN-----YISVA 64
Query: 66 GHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKV 125
+ VP G VV A++T + R A I+C+G + + GI+R++DVRATE D+V
Sbjct: 65 SFGSKTVVPVVGDVVTAKITVINQRFAKCVIICIGKTCLNRPYRGILRKEDVRATEKDRV 124
Query: 126 DMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAEST 167
+M+ FRPGDI+ A VL L + Y L+TA+N+LGV A S
Sbjct: 125 EMYKCFRPGDIILARVLPLVELNTYHLTTAENELGVAVAMSN 166
>gi|323303336|gb|EGA57132.1| Csl4p [Saccharomyces cerevisiae FostersB]
Length = 292
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 78/157 (49%), Gaps = 36/157 (22%)
Query: 53 PDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAK---------- 102
P + R T + + +P+ G +V+ RVT++ + A +I+ V K
Sbjct: 112 PGTEKGRKTNKYANNDFANNLPKEGDIVLTRVTRLSLQRAXVEILAVEDKPSPIDSGIGS 171
Query: 103 ------------------------SVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVR 138
+ E F GIIR QDVR+T+ D+V + F+PGDIVR
Sbjct: 172 NGSGIVAAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVR 231
Query: 139 ASVLSLGDARAYFLSTAKNDLGVV--SAESTAGKLVY 173
A VLSLGD Y+L+TA+NDLGVV A + AG L+Y
Sbjct: 232 AQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMY 268
>gi|367014001|ref|XP_003681500.1| hypothetical protein TDEL_0E00460 [Torulaspora delbrueckii]
gi|359749161|emb|CCE92289.1| hypothetical protein TDEL_0E00460 [Torulaspora delbrueckii]
Length = 287
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 73/139 (52%), Gaps = 36/139 (25%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSV---------------------------- 104
+P+ +V+ RVT++ + A+ +I+ V ++V
Sbjct: 127 LPKEDDIVLTRVTRISLQRANVEILAVENQAVPVDSGIGSNGSGIVAAGGGSGAATFSIA 186
Query: 105 ------REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKND 158
E F G+IR QDVRATE D V + SF+PGDIVRA VLSLGD Y+L+TA+ND
Sbjct: 187 QASSDLGETFRGLIRSQDVRATERDTVKIIDSFKPGDIVRAQVLSLGDGTNYYLTTARND 246
Query: 159 LGVVSAEST--AGKLVYCI 175
LGVV A + G L+Y I
Sbjct: 247 LGVVFARAVNGTGGLMYAI 265
>gi|157120762|ref|XP_001659760.1| hypothetical protein AaeL_AAEL001619 [Aedes aegypti]
gi|108883049|gb|EAT47274.1| AAEL001619-PA [Aedes aegypti]
Length = 211
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 91/162 (56%), Gaps = 8/162 (4%)
Query: 7 EMVLVTPGEVLGKATEVK-AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVT 65
E + PG+ L +E G+G Y + G ++ASL+G+++ ++ + V
Sbjct: 12 ESYICVPGQRLCAISEYTVGGEGTY--EKLGYLHASLSGVVKIRKRHKNN-----YISVA 64
Query: 66 GHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKV 125
+ VP G VV A++T + R A I+C+G + + GI+R++DVRATE D+V
Sbjct: 65 SFGSKTVVPVVGDVVTAKITVINQRFAKCVIICIGKTCLNRPYRGILRKEDVRATEKDRV 124
Query: 126 DMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAEST 167
+M+ FRPGD++ A VL L + Y L+TA+N+LGV A S
Sbjct: 125 EMYKCFRPGDVILARVLPLVELNTYHLTTAENELGVAVAMSN 166
>gi|254573788|ref|XP_002494003.1| Subunit of the exosome, which is an essential complex present in
both nucleus and cytoplasm [Komagataella pastoris GS115]
gi|238033802|emb|CAY71824.1| Subunit of the exosome, which is an essential complex present in
both nucleus and cytoplasm [Komagataella pastoris GS115]
gi|328354179|emb|CCA40576.1| exosome complex component CSL4 [Komagataella pastoris CBS 7435]
Length = 301
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 45/148 (30%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAK------------------------------ 102
+P+ G +V+ RVT++ R A+ +++ V +
Sbjct: 131 LPQEGDIVLVRVTRISQRQANVEVLAVEGRGNVGEESGVGSNGSGAIASGGGSGASSFIN 190
Query: 103 -------------SVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARA 149
+ E F GIIR QDV++T DKV ++ FRPGD++RA V+SLGD
Sbjct: 191 AIATSASLIAQRSDIGETFKGIIRSQDVQSTNRDKVQINKCFRPGDVLRAIVISLGDGSN 250
Query: 150 YFLSTAKNDLGVVSAEST--AGKLVYCI 175
Y++STA+NDLGV+ A+S AG +Y +
Sbjct: 251 YYMSTARNDLGVILAKSNGGAGNAMYAV 278
>gi|344231151|gb|EGV63033.1| hypothetical protein CANTEDRAFT_93806 [Candida tenuis ATCC 10573]
Length = 273
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 101 AKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLG 160
A + E F G+IR QDVR+T+ DKV + SF+PGDIVRA ++SLGD Y+LSTA+NDLG
Sbjct: 174 AGELGESFKGVIRSQDVRSTDRDKVKIIESFKPGDIVRALIISLGDGSNYYLSTARNDLG 233
Query: 161 VVSAESTAG 169
V+ A+S G
Sbjct: 234 VIYAKSENG 242
>gi|255731085|ref|XP_002550467.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132424|gb|EER31982.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 354
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 21/157 (13%)
Query: 31 VAKHNGLVYASLTGL--------LRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGS---- 78
+ K N +V +T + + +L P PD V V G +H +P G
Sbjct: 180 LPKENDIVLVRITKISNIQAYCEILSLENKPILPDS--GVGVNGSISHISIPSTGGSQHL 237
Query: 79 VVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVR 138
+ + + +++ I +G E F GIIR D+R+TE DK+ + F+PGDIVR
Sbjct: 238 FNLQSIASSQSTLSNFQIYDIG-----ENFKGIIRINDIRSTERDKLKIIDCFKPGDIVR 292
Query: 139 ASVLSLGDARAYFLSTAKNDLGVVSA--ESTAGKLVY 173
A ++SLGD Y+LSTA+NDLGVV A E+ AG+L+Y
Sbjct: 293 AIIISLGDGSNYYLSTARNDLGVVFAKSENGAGELMY 329
>gi|296816276|ref|XP_002848475.1| exosome subunit Csl4 [Arthroderma otae CBS 113480]
gi|238841500|gb|EEQ31162.1| exosome subunit Csl4 [Arthroderma otae CBS 113480]
Length = 263
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 100/222 (45%), Gaps = 57/222 (25%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG--LLR-----------------TLS 50
+ PG LG + +G G YV + + AS+ G +LR + S
Sbjct: 23 IAVPGLRLGDLSTYTSGPGTYV--RDSSICASIAGPVILRDDDIETNKRNPRKIITVSRS 80
Query: 51 PPPDSP-DQRP--TVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV-------- 99
P D+ QRP T +P S+V+ARVT+V R A+ I+ V
Sbjct: 81 PKADTNGTQRPLSTPHTKAPLKFNTLPAVDSIVLARVTRVQKRQATVSILMVVDDQNNDL 140
Query: 100 ------------------GAKSVRE-------KFSGIIRQQDVRATEIDKVDMHLSFRPG 134
G S +F IIR++DVRA E D+V M FR G
Sbjct: 141 IDQDMRTILSSAPIITTAGTDSTSTSNTADDLRFQAIIRKEDVRAVEKDRVVMEDMFRVG 200
Query: 135 DIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
DIVRA V+S+GD +Y+ STA+N+LGVV A S G +++ +S
Sbjct: 201 DIVRAYVISVGDQSSYYCSTARNELGVVMARSEGGNMMFPVS 242
>gi|403216254|emb|CCK70751.1| hypothetical protein KNAG_0F00820 [Kazachstania naganishii CBS
8797]
Length = 248
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 97 MCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAK 156
M + + E F GI+R QDVRA + DKV M F+PGDI++A VLSLGD Y+L+TA+
Sbjct: 146 MSQSSSDLGETFRGIVRSQDVRAVDRDKVKMIECFKPGDIIKAQVLSLGDGNNYYLTTAR 205
Query: 157 NDLGVVSAEST--AGKLVY 173
NDLGVV A S AG L+Y
Sbjct: 206 NDLGVVFARSDNGAGGLMY 224
>gi|212529884|ref|XP_002145099.1| exosome complex subunit Csl4, putative [Talaromyces marneffei ATCC
18224]
gi|210074497|gb|EEA28584.1| exosome complex subunit Csl4, putative [Talaromyces marneffei ATCC
18224]
Length = 247
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 24/131 (18%)
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCV------------------------GAKSVR 105
+ +P SVV+ARVT+V R I+ V + S
Sbjct: 96 YNTLPAVDSVVLARVTRVQKRQVMLSILVVLDDASTSDNDNIAAILTSAANPENQSTSDE 155
Query: 106 EKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAE 165
+F +IR++DVRA E D+V + FR GD+VR S++SLGD Y+L+TA+NDLGVV A
Sbjct: 156 LRFQALIRKEDVRAVEKDRVVLEEMFRVGDVVRGSIISLGDQSFYYLTTARNDLGVVMAR 215
Query: 166 STAGKLVYCIS 176
S AG +++ +S
Sbjct: 216 SDAGNMMFPVS 226
>gi|68069599|ref|XP_676711.1| 3'-5' exoribonuclease [Plasmodium berghei strain ANKA]
gi|56496530|emb|CAH95860.1| 3'-5' exoribonuclease Csl4 homolog, putative [Plasmodium berghei]
Length = 194
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 6/163 (3%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+V PGEV+G +G Y+ N + +++ G + +S + + + + + K
Sbjct: 4 IVLPGEVVGNINNYISGNNTYIL--NNEIRSTILGK-KNISI---NNENKQIINIDVIKD 57
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
+ P+P+ G +VI +V +V M +IM K ++ G I + D+ E D D
Sbjct: 58 YTPLPQVGDLVICKVYRVTFNMIYCNIMLTNNKPLKNSLKGYINKSDIHIYEGDLGDNFD 117
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLV 172
F+ GDI++A VLS+G +Y LST +DLGV+ A S G ++
Sbjct: 118 CFKQGDIIKAKVLSIGQHSSYKLSTVGSDLGVIIALSEKGDIL 160
>gi|242013917|ref|XP_002427645.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512075|gb|EEB14907.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 208
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 89/170 (52%), Gaps = 13/170 (7%)
Query: 5 EEEMVLVTPGEVLGKAT-EVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVE 63
E + ++ PG+ L A E +G G + +G + ++L G ++ + + V
Sbjct: 3 EIKKLVCIPGQRLTYANQEYVSGPGT--IERDGFIRSTLAGFVQI-----EKQQKNSIVT 55
Query: 64 VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
V + VP PG +V A++ V + +I VG + + G++R++D+RATE D
Sbjct: 56 VKNYNQQTVVPTPGDIVTAKIMTVSHWLCKCEIKGVGEVILTRPYRGLLRKEDIRATEKD 115
Query: 124 KVDMHLSFRPGDIVRAS-----VLSLGDARAYFLSTAKNDLGVVSAESTA 168
K++++ FRPGDI+ A + + + Y LSTA+N+LGVVSA A
Sbjct: 116 KIEVYKCFRPGDIILARKFIILTIVIKKSHWYMLSTAENELGVVSAYGEA 165
>gi|336370583|gb|EGN98923.1| hypothetical protein SERLA73DRAFT_181651 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383362|gb|EGO24511.1| hypothetical protein SERLADRAFT_467947 [Serpula lacrymans var.
lacrymans S7.9]
Length = 190
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 88/161 (54%), Gaps = 15/161 (9%)
Query: 23 VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIA 82
++ G G Y +G V ASL G+ R+ +T +A VP GS+V+
Sbjct: 22 LQIGGGLY--SKDGQVRASLIGVPRSKG-----------SAITISRARPHVPTVGSIVLG 68
Query: 83 RVTKVMTRMASADIMCVGAKSV--REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRAS 140
V ++ A I V + ++++G+IR QDVR TE DKV + FR GD+V+
Sbjct: 69 TVIRLSPLQAIVAITVVDGVPLPTGDEYTGVIRTQDVRGTEKDKVKIGDCFRGGDVVKGL 128
Query: 141 VLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
V+SLGDAR+ +++TA+NDLGV+ A S AG + +S ++
Sbjct: 129 VISLGDARSNYITTARNDLGVIFATSEAGATLEPVSWQEMR 169
>gi|344243180|gb|EGV99283.1| RRP12-like protein [Cricetulus griseus]
Length = 1390
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 81/159 (50%), Gaps = 24/159 (15%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLTKTS----ENGALPVVSVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G+VV +V+ + +R A I+ VG+ ++ F G IR++D+RATE DK+
Sbjct: 64 LPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKI------- 116
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAGK 170
SLGDA++ Y L+TA+N+LGVV A S +GK
Sbjct: 117 ----------SLGDAQSNYLLTTAENELGVVVAHSESGK 145
>gi|241948613|ref|XP_002417029.1| 3'-5' exoribonuclease, exosome subunit, putative [Candida
dubliniensis CD36]
gi|223640367|emb|CAX44617.1| 3'-5' exoribonuclease, exosome subunit, putative [Candida
dubliniensis CD36]
Length = 322
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Query: 106 EKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA- 164
E F GIIR D+R+TE DK+ + F+PGDIV+A V+SLGD Y+LSTAKN+LGVV A
Sbjct: 227 ENFKGIIRINDIRSTERDKLKIIDCFKPGDIVKAQVISLGDGSNYYLSTAKNELGVVFAK 286
Query: 165 -ESTAGKLVYCI 175
E+ AG L+Y I
Sbjct: 287 SENGAGDLMYPI 298
>gi|365758756|gb|EHN00583.1| Csl4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 119
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Query: 106 EKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAE 165
E F GIIR QDVR+T+ D+V + F+PGDIVRA VLSLGD Y+L+TA+NDLGVV A
Sbjct: 26 ETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFAR 85
Query: 166 ST--AGKLVY 173
+ AG L+Y
Sbjct: 86 AANGAGGLMY 95
>gi|68484729|ref|XP_713676.1| likely exosome component Csl4p [Candida albicans SC5314]
gi|46435185|gb|EAK94572.1| likely exosome component Csl4p [Candida albicans SC5314]
Length = 330
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Query: 106 EKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA- 164
E F GIIR D+R+TE DK+ + F+PGDIV+A V+SLGD Y+L+TAKN+LGVV A
Sbjct: 235 ENFKGIIRINDIRSTERDKLKLIDCFKPGDIVKAQVISLGDGSNYYLTTAKNELGVVFAK 294
Query: 165 -ESTAGKLVYCI 175
E+ AG L+Y I
Sbjct: 295 SENGAGDLMYPI 306
>gi|83317659|ref|XP_731258.1| 3'-5' exoribonuclease Csl4 [Plasmodium yoelii yoelii 17XNL]
gi|23491235|gb|EAA22823.1| 3'-5' exoribonuclease csl4 homolog (ec 3.1.13.-) (cgi-108). [human,
putative [Plasmodium yoelii yoelii]
Length = 195
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 84/163 (51%), Gaps = 6/163 (3%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+V PGEV+G +G Y+ N + +++ G + +S + + + + + K
Sbjct: 5 IVLPGEVVGNLNNYISGNNTYIL--NNEIRSTILGK-KNISI---NNENKEIINIDVIKD 58
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
+ P+P+ G +VI +V +V M +I+ K ++ G I + D+ E D D
Sbjct: 59 YTPLPQVGDLVICKVYRVTFNMIYCNILLTNNKPLKNSLKGYINKSDIHIYEGDLGDNFD 118
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLV 172
F+ GDI++A VLS+G +Y LST +DLGV+ A S G ++
Sbjct: 119 CFKQGDIIKAKVLSIGQHSSYKLSTVGSDLGVIIALSEKGDIL 161
>gi|238879148|gb|EEQ42786.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 330
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Query: 106 EKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA- 164
E F GIIR D+R+TE DK+ + F+PGDIV+A V+SLGD Y+L+TAKN+LGVV A
Sbjct: 235 ENFKGIIRINDIRSTERDKLKLIDCFKPGDIVKAQVISLGDGSNYYLTTAKNELGVVFAK 294
Query: 165 -ESTAGKLVYCI 175
E+ AG L+Y I
Sbjct: 295 SENGAGDLMYPI 306
>gi|443914756|gb|ELU36512.1| exoribonuclease [Rhizoctonia solani AG-1 IA]
Length = 194
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 85/160 (53%), Gaps = 23/160 (14%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PG+ L + V + G Y NG+ +SL G+ + + VT +A
Sbjct: 7 PGQPLQLQSPVTS-SGTY--GRNGVTRSSLLGIK----------SEGGIIPVTAGRAQ-- 51
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVR--EKFSGIIRQQDVRATEIDKVDMHLS 130
P PG VI +T++ A+ I V + E+F+G+IR QDVR+TE DKV +
Sbjct: 52 PPSPGVTVIGTITRLSPLQATMSITVVDGIPLPHGEEFTGVIRSQDVRSTEKDKVKIADC 111
Query: 131 FRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
FR GD+VR GD+R+Y++ST +NDLGV+ A S AGK
Sbjct: 112 FRGGDVVR------GDSRSYYVSTTRNDLGVIFATSEAGK 145
>gi|70944928|ref|XP_742342.1| 3'-5' exoribonuclease Csl4 [Plasmodium chabaudi chabaudi]
gi|56521265|emb|CAH75916.1| 3'-5' exoribonuclease Csl4 homolog, putative [Plasmodium chabaudi
chabaudi]
Length = 198
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 6/163 (3%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+V PGEV+G G Y+ K+ + +++ G + +S +S + + + K
Sbjct: 8 IVLPGEVVGSLNNYINGSNTYILKNE--IRSTILGK-KNISINNES---KQIINIDVIKD 61
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
+ P+P+ G +VI +V +V M +IM K ++ G I + D+ E D D
Sbjct: 62 YVPLPQVGDLVICKVYRVTFNMIYCNIMLRNNKPLKNSLKGYINKSDIHIYEGDLGDNFD 121
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLV 172
F+ GDI++A VLS+G +Y LST +DLGV+ A S G ++
Sbjct: 122 CFKQGDIIKAKVLSIGQHSSYKLSTVGSDLGVIIALSEKGDIL 164
>gi|68484820|ref|XP_713631.1| likely exosome component Csl4p [Candida albicans SC5314]
gi|46435138|gb|EAK94526.1| likely exosome component Csl4p [Candida albicans SC5314]
Length = 330
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 106 EKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA- 164
E F GIIR D+R TE DK+ + F+PGDIV+A V+SLGD Y+L+TAKN+LGVV A
Sbjct: 235 ENFKGIIRINDIRLTERDKLKLIDCFKPGDIVKAQVISLGDGSNYYLTTAKNELGVVFAK 294
Query: 165 -ESTAGKLVYCI 175
E+ AG L+Y I
Sbjct: 295 SENGAGDLMYPI 306
>gi|149040178|gb|EDL94216.1| rCG57589, isoform CRA_b [Rattus norvegicus]
Length = 178
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 80/158 (50%), Gaps = 24/158 (15%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLTKTS----ENGALPVVSVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G+VV +V+ + +R A I+ VG+ ++ F G IR++D+RATE DK+
Sbjct: 64 LPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKI------- 116
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 117 ----------SLGDAQSNYLLTTAENELGVVVAHSESG 144
>gi|148709920|gb|EDL41866.1| exosome component 1, isoform CRA_a [Mus musculus]
Length = 182
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 80/158 (50%), Gaps = 24/158 (15%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 14 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLMKTS----ENGAVPVVSVMRETESQL 67
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G+VV +V+ + +R A I+ VG+ ++ F G IR++D+RATE DK+
Sbjct: 68 LPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKI------- 120
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 121 ----------SLGDAQSNYLLTTAENELGVVVAHSESG 148
>gi|146162925|ref|XP_001010397.2| hypothetical protein TTHERM_00354990 [Tetrahymena thermophila]
gi|146146221|gb|EAR90152.2| hypothetical protein TTHERM_00354990 [Tetrahymena thermophila
SB210]
Length = 193
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 25 AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARV 84
AG+G Y + NG ++AS+ G + D ++ G+K + GS+V A+V
Sbjct: 21 AGQGCY--ELNGKIFASICGKCQI------DKDNIVSIVPLGNKVANL--QVGSIVTAKV 70
Query: 85 TKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSL 144
++ IM V + GIIR+QDVR T +D + M F PGDI++A +S
Sbjct: 71 LRIRDNKVEVKIMMVEDAVINYNLQGIIRKQDVRQTNLDILKMEEQFIPGDIIKARFISY 130
Query: 145 GDARAYFLSTAKNDLGVVSAESTAGK 170
GD++ +LS +++LGVV A+ T K
Sbjct: 131 GDSQKLYLSVTEDELGVVFAKHTESK 156
>gi|261189715|ref|XP_002621268.1| exosome complex subunit Csl4 [Ajellomyces dermatitidis SLH14081]
gi|239591504|gb|EEQ74085.1| exosome complex subunit Csl4 [Ajellomyces dermatitidis SLH14081]
Length = 290
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 77/157 (49%), Gaps = 33/157 (21%)
Query: 55 SPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV--------------- 99
SP PT + + +P GS+V+ARVT+V R A+ I+ V
Sbjct: 119 SPLPTPTTKRPIKHKYNTLPAVGSIVLARVTRVQKRQATLSILVVLDDNPSSPYPTTTAV 178
Query: 100 ----------------GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLS 143
A +R F +IR++DVRA E D+V M FR GDIVRA V+S
Sbjct: 179 NDLPASLLSTTNADPLNADDLR--FQALIRKEDVRAVEKDRVVMDEMFRVGDIVRAVVIS 236
Query: 144 LGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDL 180
LGD Y+ STA+N+LGVV S G ++ +S ++
Sbjct: 237 LGDQSFYYCSTARNELGVVMGRSEEGNVLVPVSWREM 273
>gi|327352141|gb|EGE80998.1| exosome complex subunit Csl4 [Ajellomyces dermatitidis ATCC 18188]
Length = 260
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 77/157 (49%), Gaps = 33/157 (21%)
Query: 55 SPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV--------------- 99
SP PT + + +P GS+V+ARVT+V R A+ I+ V
Sbjct: 89 SPLPTPTTKRPIKHKYNTLPAVGSIVLARVTRVQKRQATLSILVVLDDNPSSPYPTTTAV 148
Query: 100 ----------------GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLS 143
A +R F +IR++DVRA E D+V M FR GDIVRA V+S
Sbjct: 149 NDLPASLLSTTNADPLNADDLR--FQALIRKEDVRAVEKDRVVMDEMFRVGDIVRAVVIS 206
Query: 144 LGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDL 180
LGD Y+ STA+N+LGVV S G ++ +S ++
Sbjct: 207 LGDQSFYYCSTARNELGVVMGRSEEGNVLVPVSWREM 243
>gi|239612967|gb|EEQ89954.1| exosome complex subunit Csl4 [Ajellomyces dermatitidis ER-3]
Length = 290
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 77/157 (49%), Gaps = 33/157 (21%)
Query: 55 SPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV--------------- 99
SP PT + + +P GS+V+ARVT+V R A+ I+ V
Sbjct: 119 SPLPTPTTKRPIKHKYNTLPAVGSIVLARVTRVQKRQATLSILVVLDDNPSSPYPTTTAV 178
Query: 100 ----------------GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLS 143
A +R F +IR++DVRA E D+V M FR GDIVRA V+S
Sbjct: 179 NDLPASLLSTTNADPLNADDLR--FQALIRKEDVRAVEKDRVVMDEMFRVGDIVRAVVIS 236
Query: 144 LGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDL 180
LGD Y+ STA+N+LGVV S G ++ +S ++
Sbjct: 237 LGDQSFYYCSTARNELGVVMGRSEEGNVLVPVSWREM 273
>gi|312069234|ref|XP_003137587.1| hypothetical protein LOAG_02001 [Loa loa]
gi|307767251|gb|EFO26485.1| hypothetical protein LOAG_02001 [Loa loa]
Length = 215
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
Query: 11 VTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLR---TLSPPPDSPDQRPTVEVTG 66
V PG+ L +E +KAG G Y + G +YASL G L T+ ++ E
Sbjct: 23 VIPGDRLFPISEQLKAGIGTY--ELFGHIYASLAGTLHMYTTVERDKETKIVEVRRESEK 80
Query: 67 HKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K H +P G +V A+V + R A I CV + +F+GI+R++D+ E +K+
Sbjct: 81 EKRH-IMPYVGCIVTAKVQNIGQRFAKCAIHCVECSVLSHEFNGILRKEDIMPIEKEKIK 139
Query: 127 MHLSFRPGDIVRASVLSLGDAR-AYFLSTAKNDLGVVSA-ESTAGKLVYC 174
+ PGD++ A V+ GD + +Y LST +++LGVVS G++V C
Sbjct: 140 LEQCVHPGDVILARVIGFGDNQHSYLLSTVEDELGVVSGIGDFGGRMVPC 189
>gi|448517360|ref|XP_003867776.1| hypothetical protein CORT_0B06300 [Candida orthopsilosis Co 90-125]
gi|380352115|emb|CCG22339.1| hypothetical protein CORT_0B06300 [Candida orthopsilosis]
Length = 314
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Query: 106 EKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAE 165
E + GIIR D+R+TE DKV + F+PGDIVR ++SLGD + Y+ STA+NDLGVV A+
Sbjct: 219 ENYRGIIRASDIRSTERDKVIVGQCFKPGDIVRCMIISLGDGQNYYCSTARNDLGVVLAK 278
Query: 166 ST--AGKLVY 173
S AG L+Y
Sbjct: 279 SVGGAGNLMY 288
>gi|145534223|ref|XP_001452856.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420555|emb|CAK85459.1| unnamed protein product [Paramecium tetraurelia]
Length = 186
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 19/157 (12%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLL----RTLSPPPDSPDQRPTVEVTGHK 68
PGE++ E+++G G YV + ++AS+ G L + +S P S Q P +++
Sbjct: 7 PGELIKHKNELQSGIGTYVK--DDKIFASMKGSLTMNEQLISIFP-SHQQDPELKI---- 59
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMH 128
G+++I +V + I+ + V G++R+Q++R+ EID ++M+
Sbjct: 60 --------GAIIIGQVNSIREDRVFVRILKINGVKVNNYIEGVLRKQNIRSHEIDLLEMN 111
Query: 129 LSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAE 165
+ PGDI++A ++S GD+ +LSTA+++LGV+ A+
Sbjct: 112 KCYLPGDIIKARMISYGDSLKLYLSTAEDELGVLFAK 148
>gi|367008074|ref|XP_003688766.1| hypothetical protein TPHA_0P01750 [Tetrapisispora phaffii CBS 4417]
gi|357527076|emb|CCE66332.1| hypothetical protein TPHA_0P01750 [Tetrapisispora phaffii CBS 4417]
Length = 284
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 71/139 (51%), Gaps = 36/139 (25%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSV---------------------------- 104
+P+ G +V+A+VT++ + S +I+ V V
Sbjct: 124 LPKEGDIVLAKVTRITLQNVSLEILAVENSPVPIDSGVGSNGHGVVAAGAGSGSASYSVS 183
Query: 105 ------REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKND 158
+ F G +R QDVRATE D V + F+PGDIVRA +LSLGD Y+L+TAK+D
Sbjct: 184 QTSSDFGDPFRGTLRSQDVRATERDSVKIIECFKPGDIVRAQILSLGDGVNYYLTTAKDD 243
Query: 159 LGVVSAES--TAGKLVYCI 175
LGVV A+S AG +Y +
Sbjct: 244 LGVVFAKSGNGAGNQMYAL 262
>gi|378726737|gb|EHY53196.1| exosome complex subunit Csl4 [Exophiala dermatitidis NIH/UT8656]
Length = 245
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 97/212 (45%), Gaps = 53/212 (25%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQ----------- 58
V PG+VLG + G G +V ++N + AS+ G LS P +
Sbjct: 9 FVVPGQVLGNTSSHVPGPGTHVYENN--IVASIIGRPVVLSSPAAADTSAKTKTNNTSTS 66
Query: 59 --RPTVEV--TGHKAHGP-------------------------VPEPGSVVIARVTKVMT 89
+P + V +G G +P+ GS V+ R+T+V
Sbjct: 67 TNKPIISVPHSGTAGEGVTPTPTNTITTSSTIGGSGGSTNTTLLPKVGSTVLVRITRVQQ 126
Query: 90 RMASADIMCVGAK--------SVRE---KFSGIIRQQDVRATEIDKVDMHLSFRPGDIVR 138
R SA I+ V V + +F ++R++D+R E DK+ M+ +R GDIVR
Sbjct: 127 RQISASILVVDPSPNDITSYTRVTDDDLQFQAVLRREDIRTHEKDKIVMNDMYRVGDIVR 186
Query: 139 ASVLSLGDARAYFLSTAKNDLGVVSAESTAGK 170
A V+SLGD R Y++STA N+ GVV A S AG
Sbjct: 187 AMVISLGDERNYYISTAGNEFGVVVATSDAGN 218
>gi|354543752|emb|CCE40474.1| hypothetical protein CPAR2_105100 [Candida parapsilosis]
Length = 321
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Query: 106 EKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAE 165
E + GIIR D+R+TE DK+ + F+PGD+VR ++SLGD + Y+ STA+NDLGVV A+
Sbjct: 226 ENYRGIIRASDIRSTERDKIVVGQCFKPGDVVRCMIISLGDGQNYYCSTARNDLGVVLAK 285
Query: 166 ST--AGKLVY 173
S AG+L+Y
Sbjct: 286 SCGGAGRLMY 295
>gi|156093558|ref|XP_001612818.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148801692|gb|EDL43091.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 189
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 6/163 (3%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+V PGE LG +G+ Y + V +++ G R L+ + D + + V K
Sbjct: 4 IVLPGEALGSCDAYVSGENTYSLQKE--VRSAILGR-RQLTT---NGDGKQVISVANTKE 57
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
P+P+ G +V +V +V + +I+ + +K+VR F I + D+ E + D
Sbjct: 58 FIPLPQVGDLVTCKVYRVTFNLIYCNIILLNSKAVRNSFRAFINKSDIHVYEGELGDNFE 117
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLV 172
F+ GDI+RA VLS+ +Y LST +DLGV+ A S G+++
Sbjct: 118 CFKQGDIIRAKVLSVAQHGSYKLSTVGSDLGVILALSDGGQIM 160
>gi|146420783|ref|XP_001486345.1| hypothetical protein PGUG_02016 [Meyerozyma guilliermondii ATCC
6260]
Length = 267
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 101 AKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLG 160
A + E F GIIR QDVR T+ D+V + FRPGDIVR + SLGD Y+L+TA+NDLG
Sbjct: 166 AADLGETFKGIIRTQDVRLTDRDRVQIVDCFRPGDIVRGMISSLGDGSNYYLTTARNDLG 225
Query: 161 VVSA--ESTAGKLVY 173
VV A E AG ++Y
Sbjct: 226 VVFARGEGGAGGILY 240
>gi|190345945|gb|EDK37918.2| hypothetical protein PGUG_02016 [Meyerozyma guilliermondii ATCC
6260]
Length = 267
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 101 AKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLG 160
A + E F GIIR QDVR T+ D+V + FRPGDIVR + SLGD Y+L+TA+NDLG
Sbjct: 166 AADLGETFKGIIRTQDVRLTDRDRVQIVDCFRPGDIVRGMISSLGDGSNYYLTTARNDLG 225
Query: 161 VVSA--ESTAGKLVY 173
VV A E AG ++Y
Sbjct: 226 VVFARGEGGAGGILY 240
>gi|170594968|ref|XP_001902194.1| 3'-5' exoribonuclease CSL4 homolog [Brugia malayi]
gi|158590258|gb|EDP28956.1| 3'-5' exoribonuclease CSL4 homolog, putative [Brugia malayi]
Length = 216
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 11 VTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLR---TLSPPPDSPDQRPTVEVTG 66
V PG+ L +E +KAG G Y + G +YASL G + T+ ++ E
Sbjct: 24 VIPGDRLFPISEQLKAGIGTY--ELFGHIYASLAGTMHMYTTVERDKETKIVEVRRESEK 81
Query: 67 HKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K H +P G +V A+V + R A I CV + +F+G++R++D+ E +KV
Sbjct: 82 EKRH-VMPYVGCIVTAKVQNIGQRFAKCTIHCVECSVLSHEFNGVLRKEDIMPIEKEKVK 140
Query: 127 MHLSFRPGDIVRASVLSLGDAR-AYFLSTAKNDLGVVSAESTAGK 170
+ PGD++ A V+ GD + +Y LST +++LGVVS G+
Sbjct: 141 LEQCIHPGDVILARVIGFGDNQHSYLLSTVEDELGVVSGIGDLGE 185
>gi|29841415|gb|AAP06447.1| similar to NM_016046 homolog of yeast exosomal core protein CSL4 in
Homo sapiens [Schistosoma japonicum]
Length = 250
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 10 LVTPGEVLGKATEV-KAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHK 68
+V PG+++ + K+G Y N +++S G ++ S D TV V K
Sbjct: 6 IVVPGDLICCSNATNKSGTSTYCRSGN--IFSSAFGYIKEES----HADGSKTVSVEPLK 59
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMH 128
G VP G++V+A+V + R DI+ VG + F G+IR++D+RAT+ D+ +
Sbjct: 60 TAGIVPYAGAIVLAKVCSITGRFVRCDIVAVGDVYLSGPFKGLIRREDIRATQRDQAEPG 119
Query: 129 LSFRPGDIVRASVLSLGDARAY 150
FRPGDIVRA V++L AY
Sbjct: 120 CCFRPGDIVRARVINLLGPGAY 141
>gi|328854549|gb|EGG03681.1| hypothetical protein MELLADRAFT_37939 [Melampsora larici-populina
98AG31]
Length = 206
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 90/181 (49%), Gaps = 13/181 (7%)
Query: 10 LVTPGEVLGKATEVKAG------KGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVE 63
+V PG+ + T+ + G V +G +YAS G + SP TV
Sbjct: 12 IVVPGQAFAQTTDNQKSISATYQPGPGVFSRDGKLYASTAGYAKREGGVIHSPQ---TVS 68
Query: 64 VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVG--AKSVREKFSGIIRQQDVRATE 121
V VP G++V VTK+ AS I+ V V + F G+IR QDVR +
Sbjct: 69 VVRPTRLARVPVVGTIVTGLVTKLNKLQASLAIITVEDVPLPVGQDFPGVIRAQDVRQVD 128
Query: 122 IDKVDMHLSFRPGDIVRASVLSL-GDARAYFLSTAKNDLGVVSAEST-AGKLVYCISKYD 179
DKV + FRPGDIVRA V+S + Y L+T +N+LGVV A++T G L+ +S +
Sbjct: 129 KDKVKIWTCFRPGDIVRAEVISFPTGSTGYLLATFRNELGVVFAQNTRTGNLMKALSWEE 188
Query: 180 L 180
+
Sbjct: 189 M 189
>gi|429328527|gb|AFZ80287.1| hypothetical protein BEWA_031400 [Babesia equi]
Length = 183
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 95/173 (54%), Gaps = 8/173 (4%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
L PG LG +++ G YV + ++Y+S+ G +S P+ +VE KA
Sbjct: 5 LTYPGTCLGPVSDLVPGNNTYV--RDSMIYSSVLGNC-IISRDPNVEKGTVSVETNQIKA 61
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
P G+VV+A+VTK+ + +++ V + +++ + G++ +V ++ V +
Sbjct: 62 ----PYVGAVVVAQVTKLHRKKLECNVVSVDGRVLKDPYKGVLASTNVHESKNIDVIISD 117
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS-KYDLN 181
F+PGDI++A V+ GD + L+T++ DLGV+ A+S G+ + IS KY L+
Sbjct: 118 WFKPGDIIKAKVIYAGDGKQIILTTSEVDLGVIKAQSATGEEMTPISWKYFLS 170
>gi|154283085|ref|XP_001542338.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410518|gb|EDN05906.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 289
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 34/143 (23%)
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCV------------------------------ 99
+ +P SVV+ARVT+V R A+ I+ V
Sbjct: 132 YNTLPTVDSVVLARVTRVQKRQATLSILVVLDDNPSSPYPATTAAADGLPHSLLSTTNAD 191
Query: 100 --GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKN 157
A +R F +IR++DVRA E D+V M FR GDIVRA V+SLGD Y+ STA+N
Sbjct: 192 PLNADDLR--FQALIRKEDVRAVEKDRVVMDEMFRVGDIVRAVVISLGDQSFYYCSTARN 249
Query: 158 DLGVVSAESTAGKLVYCISKYDL 180
DLGVV S G ++ +S ++
Sbjct: 250 DLGVVMGRSEEGNVLVPVSWREM 272
>gi|225561671|gb|EEH09951.1| 3'-5' exoribonuclease CSL4 [Ajellomyces capsulatus G186AR]
Length = 290
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 69/141 (48%), Gaps = 36/141 (25%)
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCV------------------------------ 99
+ +P SVV+ARVT+V R A+ I+ V
Sbjct: 131 YNTLPAVDSVVLARVTRVQKRQATLSILVVLEDNPSSPYPATTTAAAADELPHSLLSTTN 190
Query: 100 ----GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTA 155
A +R F +IR++DVRA E D+V M FR GDIVRA V+SLGD Y+ STA
Sbjct: 191 ADPLNADDLR--FQALIRKEDVRAVEKDRVVMDEMFRVGDIVRAVVISLGDQSFYYCSTA 248
Query: 156 KNDLGVVSAESTAGKLVYCIS 176
+NDLGVV S G ++ +S
Sbjct: 249 RNDLGVVMGRSEEGNVLVPVS 269
>gi|426365775|ref|XP_004049942.1| PREDICTED: exosome complex component CSL4-like [Gorilla gorilla
gorilla]
Length = 196
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 8/155 (5%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S ++ P V +++
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLVKNS---ENGALSPAVSCILYESDNC 64
Query: 73 VPEPGSVV-IARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSF 131
+ + I +V+ + +R A I+ VG+ ++ F G IR++DVRATE DKV+++ SF
Sbjct: 65 LYSDADLFFIPQVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSF 124
Query: 132 RPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAES 166
RPGDIV A V+S +R L + N G+ S S
Sbjct: 125 RPGDIVLAKVVSFIPSR--LLESQANLWGLGSTTS 157
>gi|240275275|gb|EER38789.1| exosome subunit Csl4 [Ajellomyces capsulatus H143]
Length = 289
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 68/140 (48%), Gaps = 35/140 (25%)
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCV------------------------------ 99
+ +P SVV+ARVT+V R A+ I V
Sbjct: 131 YNTLPAVDSVVLARVTRVQKRQATLSIFVVLDDNPSSPYPATAAAAADELPHSLLSTTNA 190
Query: 100 ---GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAK 156
A +R F +IR++DVRA E D+V M FR GDIVRA V+SLGD Y+ STA+
Sbjct: 191 DPLNADDLR--FQALIRKEDVRAVEKDRVVMDEMFRVGDIVRAVVISLGDQSFYYCSTAR 248
Query: 157 NDLGVVSAESTAGKLVYCIS 176
NDLGVV S G ++ +S
Sbjct: 249 NDLGVVMGRSEEGNVLVPVS 268
>gi|189502870|gb|ACE06816.1| unknown [Schistosoma japonicum]
Length = 257
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 7/142 (4%)
Query: 10 LVTPGEVLGKATEV-KAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHK 68
+V PG+++ + K+G Y N +++ G ++ S D TV V K
Sbjct: 6 IVVPGDLICCSNATNKSGTSTYCRAGN--IFSGAFGYIKEES----HADGSKTVSVEPLK 59
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMH 128
G VP G++V+A+V + R DI+ VG + F G+IR++D+RAT+ D+ +
Sbjct: 60 TAGIVPYAGAIVLAKVCSITGRFVRCDIVAVGDVYLSGPFKGLIRREDIRATQRDQAEPG 119
Query: 129 LSFRPGDIVRASVLSLGDARAY 150
FRPGDIVRA V++L AY
Sbjct: 120 CCFRPGDIVRARVINLLGPGAY 141
>gi|339234281|ref|XP_003382257.1| 3'-5' exoribonuclease CSL4-like protein [Trichinella spiralis]
gi|316978754|gb|EFV61688.1| 3'-5' exoribonuclease CSL4-like protein [Trichinella spiralis]
Length = 213
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 23 VKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPV-PEPGSVVI 81
+++G G YVA +G +ASL G L+ L+ D VEV + + P P +VV
Sbjct: 26 IRSGYGCYVA--HGYYFASLAGQLK-LTKENDCA----VVEVVRENSSTSILPSPQAVVT 78
Query: 82 ARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDV--RATEIDKVDMHLSFRPGDIVRA 139
RVT V + A I+ V + F GIIR+++V A +V M+ F+ GDIV A
Sbjct: 79 CRVTGVANKYAKCTILMVHNNILPYPFVGIIRKENVYGSAKNETEVSMYECFQEGDIVLA 138
Query: 140 SVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
V SLGD+ +Y LST + +LGV YC K+ +
Sbjct: 139 KVFSLGDSFSYLLSTEELELGVFVG--------YCKEKHKMQ 172
>gi|339234287|ref|XP_003382260.1| 3'-5' exoribonuclease CSL4-like protein [Trichinella spiralis]
gi|316978751|gb|EFV61686.1| 3'-5' exoribonuclease CSL4-like protein [Trichinella spiralis]
Length = 568
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 10/146 (6%)
Query: 19 KATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPV-PEPG 77
+ +++G G YVA +G +ASL G L+ L+ D VEV + + P P
Sbjct: 377 QEENIRSGYGCYVA--HGYYFASLAGQLK-LTKENDCA----VVEVVRENSSTSILPSPQ 429
Query: 78 SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDV--RATEIDKVDMHLSFRPGD 135
+VV RVT V + A I+ V + F GIIR+++V A +V M+ F+ GD
Sbjct: 430 AVVTCRVTGVANKYAKCTILMVHNNILPYPFVGIIRKENVYGSAKNETEVSMYECFQEGD 489
Query: 136 IVRASVLSLGDARAYFLSTAKNDLGV 161
IV A V SLGD+ +Y LST + +LGV
Sbjct: 490 IVLAKVFSLGDSFSYLLSTEELELGV 515
>gi|325091110|gb|EGC44420.1| exosome complex subunit Csl4 [Ajellomyces capsulatus H88]
Length = 289
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 67/137 (48%), Gaps = 35/137 (25%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCV--------------------------------- 99
+P SVV+ARVT+V R A+ I+ V
Sbjct: 134 LPAVDSVVLARVTRVQKRQATLSILVVLDDNPSSPYPATTAAAADELPHSLLSTTNADPL 193
Query: 100 GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDL 159
A +R F +IR++DVRA E D+V M FR GDIVRA V+SLGD Y+ STA NDL
Sbjct: 194 NADDLR--FQALIRKEDVRAVEKDRVVMDEMFRVGDIVRAVVISLGDQSFYYCSTAGNDL 251
Query: 160 GVVSAESTAGKLVYCIS 176
GVV S G ++ +S
Sbjct: 252 GVVMGRSEEGNVLVPVS 268
>gi|226295405|gb|EEH50825.1| 3'-5' exoribonuclease CSL4 [Paracoccidioides brasiliensis Pb18]
Length = 289
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 70/144 (48%), Gaps = 35/144 (24%)
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCV------------------------------ 99
+ +P S+V+ARVT+V R A+ I+ V
Sbjct: 131 YNTLPAVDSIVLARVTRVQKRQATLSILVVLDDNHPLNPTSPSYDTTNTVNPSLLSTTNA 190
Query: 100 ---GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAK 156
A +R F +IR++DVR E D V M FR GDIVRA V+SLGD Y+ STA+
Sbjct: 191 DPLNADDLR--FQALIRKEDVRTVEKDSVVMDEMFRVGDIVRAVVISLGDQSFYYCSTAR 248
Query: 157 NDLGVVSAESTAGKLVYCISKYDL 180
N+LGVV S AG ++ +S ++
Sbjct: 249 NELGVVMGRSEAGNVLVPVSWREM 272
>gi|294893804|ref|XP_002774655.1| 3'-5' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239880048|gb|EER06471.1| 3'-5' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 198
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 91/183 (49%), Gaps = 23/183 (12%)
Query: 7 EMVLVTPGEVLGKATEVKA-GKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVT 65
++V V G + A+ VKA G G Y++ G V R + P +P P+
Sbjct: 13 DLVAVPEGAEVTAASGVKALGDGQYISAKMGTVKVDNN---RVMVDSPTAPFVPPSA--- 66
Query: 66 GHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE-KFSGIIRQQDVRATEIDK 124
G VV ARV ++ T+ A I+ A + G IR QDVR +ID
Sbjct: 67 -----------GDVVYARVARITTQKAECIIVADQAGRPNNCGYRGHIRVQDVRYYDIDA 115
Query: 125 VDMHLSFRPGDIVRASVLSLGDARAYFLSTAKND--LGVVSAESTAGKLVYCISKYDLNI 182
V + FRPGD+++ VLS+GD+R+Y L+T+ D LGVV A S GK V +S +I
Sbjct: 116 VAIADCFRPGDLIKCKVLSIGDSRSYLLTTSGTDASLGVVMATSANGKNV--LSSLGADI 173
Query: 183 ILF 185
+++
Sbjct: 174 MVY 176
>gi|403220682|dbj|BAM38815.1| 3'-5' exoribonuclease [Theileria orientalis strain Shintoku]
Length = 183
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 93/174 (53%), Gaps = 9/174 (5%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+V PG +LG E YV + ++Y+++ G + S DS + +V V +
Sbjct: 4 IVFPGTLLGTVHEYTPSNNVYV--KDSVIYSAILGNVSYSSE--DS--TKTSVSVVSN-- 55
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
H P G+ VIA++ K+ A +I+CV + V++ F G++ +V ++ +V M+
Sbjct: 56 HIKTPYVGATVIAQIIKLNITKAECNIICVDGRFVKDYFKGVLSSNNVLESKNIEVFMYD 115
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS-KYDLNI 182
F+PGD +++ V+ G+ + + LSTA LGV+ S G+ + IS KY +++
Sbjct: 116 WFKPGDFIKSKVIYAGEGKQFVLSTAGLQLGVIKTTSKNGEPMVPISWKYFMSV 169
>gi|225677473|gb|EEH15757.1| exosome subunit Csl4 [Paracoccidioides brasiliensis Pb03]
Length = 290
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 70/144 (48%), Gaps = 35/144 (24%)
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCV------------------------------ 99
+ +P S+V+ARVT+V R A+ I+ V
Sbjct: 132 YNTLPAVDSIVLARVTRVQKRQATLSILVVLDDNHPLNPTSPSYDTTNTVNPSLLSTTNA 191
Query: 100 ---GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAK 156
A +R F +IR++DVR E D V M FR GDIVRA V+SLGD Y+ STA+
Sbjct: 192 DPLNADDLR--FQALIRKEDVRTVEKDSVVMDEMFRVGDIVRAVVISLGDQSFYYCSTAR 249
Query: 157 NDLGVVSAESTAGKLVYCISKYDL 180
N+LGVV S AG ++ +S ++
Sbjct: 250 NELGVVMGRSEAGNVLVPVSWREM 273
>gi|295670659|ref|XP_002795877.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284962|gb|EEH40528.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 289
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 35/144 (24%)
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCV------------------------------ 99
+ +P S+V+ARVT+V R A+ I+ +
Sbjct: 131 YNTLPAVDSIVLARVTRVQKRQATLSILVILDDNHPVNPTSPSYDTSNTVDPSLLSTTNA 190
Query: 100 ---GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAK 156
A +R F +IR++DVR E D V M FR GDIVRA V+SLGD Y+ STA+
Sbjct: 191 DPLNADDLR--FQALIRKEDVRTVEKDSVVMDEMFRVGDIVRAVVISLGDQSFYYCSTAR 248
Query: 157 NDLGVVSAESTAGKLVYCISKYDL 180
N+LGVV S AG ++ +S ++
Sbjct: 249 NELGVVMGRSEAGNVLVPVSWREM 272
>gi|403376905|gb|EJY88440.1| EXOSC1 domain containing protein [Oxytricha trifallax]
Length = 224
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 8 MVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPD-----------SP 56
M V G++LG + +GKG Y VYAS TG + D S
Sbjct: 1 MEKVHAGKLLGSTEDCISGKGTYTYLKG--VYASQTGFVNIDKSQGDKSIISVERTNQSE 58
Query: 57 DQRPTVEVTGHKAHGPV---PEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIR 113
+ + + T V P+ G++V AR+T+V A+I+ + + ++ F GI+
Sbjct: 59 KKNDSSQQTQSNIESNVFGQPKIGNLVYARITRVEPNFVKAEILAIENQPLKTVFQGILF 118
Query: 114 QQDVRATEIDKVDMHLSFRPGDIVRASVLS---LGDARAYFLSTAKNDLGVVSAES 166
+++VR +ID +++ FRP DI+RA V+S G+ + LST +++ GVV A S
Sbjct: 119 KENVRTYDIDNLELLKCFRPNDIIRARVISEQGAGNQMSTLLSTVEDENGVVFARS 174
>gi|256071809|ref|XP_002572231.1| 3'-5' exonuclease [Schistosoma mansoni]
gi|350644785|emb|CCD60492.1| 3'-5' exoribonuclease csl4-related [Schistosoma mansoni]
Length = 257
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 7/142 (4%)
Query: 10 LVTPGEVLGKAT-EVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHK 68
+V PG+V+ K+G Y N + +S G ++ S D T V K
Sbjct: 6 VVVPGDVISPLDINKKSGPSTYCCSGN--ILSSAFGYVKEES----HTDGTKTFSVAPLK 59
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMH 128
G VP GS+V+A+V+ + R DI+ +G + F G+IR++D+RAT+ D+ +
Sbjct: 60 TPGIVPYTGSIVLAKVSSITRRFVRCDIVAIGEVYLAGPFKGLIRREDIRATQRDQAEPG 119
Query: 129 LSFRPGDIVRASVLSLGDARAY 150
FRPGDIVRA V++L +Y
Sbjct: 120 CCFRPGDIVRARVINLLGPGSY 141
>gi|389582274|dbj|GAB64829.1| 3'-5' exoribonuclease Csl4 homolog [Plasmodium cynomolgi strain B]
Length = 189
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+V PGE LG +G+ Y + V +++ G R + P+ + + V K
Sbjct: 4 IVLPGEALGSCDVYVSGENTYSLQKE--VRSAILGR-RQIETDPNG---KQIISVANTKD 57
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
+P+ G +V +V +V + I+ + K+++ F I + D+ E + D
Sbjct: 58 FVTLPQVGDLVTCKVYRVTFNLIYCSIVLLNNKAIKNSFRAFINKSDIHVYEGELGDNFE 117
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLV 172
F+ GDI+RA VLS+G +Y LST +DLGV+ A S G+++
Sbjct: 118 CFKQGDIIRAKVLSVGQHGSYKLSTVGSDLGVILALSDKGQIM 160
>gi|71032387|ref|XP_765835.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352792|gb|EAN33552.1| hypothetical protein TP01_0308 [Theileria parva]
Length = 178
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 12/169 (7%)
Query: 8 MVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGH 67
M +V PG +LG ++ + YV + ++Y+S+ G S P E++
Sbjct: 1 MSVVLPGMLLGTVSDYVPLRNVYV--KDSIIYSSVLG----------SQHISPNNEISVE 48
Query: 68 KAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDM 127
VP G+VV+A++++V A I+ V +++++++ + +V ++ ++ M
Sbjct: 49 SGCVRVPYVGAVVVAQISRVHINKADCHIIAVNGRTLKDQYKASLTSNNVLESKSIEILM 108
Query: 128 HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
+ FRPGD ++A V+ GD + + LSTA LGVV S+ G+ + IS
Sbjct: 109 YEWFRPGDFIKAKVIYAGDGKVFTLSTAGIGLGVVKTTSSNGEEMVPIS 157
>gi|303314533|ref|XP_003067275.1| hypothetical protein CPC735_017320 [Coccidioides posadasii C735
delta SOWgp]
gi|240106943|gb|EER25130.1| hypothetical protein CPC735_017320 [Coccidioides posadasii C735
delta SOWgp]
gi|320037581|gb|EFW19518.1| exosome subunit Csl4 [Coccidioides posadasii str. Silveira]
Length = 263
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 36/133 (27%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSG---------------------- 110
+P GS+V+ RVT+V R A+ I+ V +S + S
Sbjct: 100 LPTVGSIVLGRVTRVQRRQATISILLVLPESQQLNPSADDSEDPSDADLPSILASASIST 159
Query: 111 --------------IIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAK 156
+IR++DVRA E D+V M SFR GDIVRA ++S+GD AY+ STA
Sbjct: 160 TSDSLNADELRPQALIRKEDVRAVEKDRVVMEESFRVGDIVRAVIVSVGDQVAYYASTAG 219
Query: 157 NDLGVVSAESTAG 169
N+LGVV A S+ G
Sbjct: 220 NELGVVMARSSTG 232
>gi|221052794|ref|XP_002261120.1| 3'-5' exoribonuclease Csl4 homolog [Plasmodium knowlesi strain H]
gi|194247124|emb|CAQ38308.1| 3'-5' exoribonuclease Csl4 homolog, putative [Plasmodium knowlesi
strain H]
Length = 189
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+V PGE LG + +G+ Y + V +++ G ++ D + + V
Sbjct: 4 IVLPGEALGSSDVYVSGENTYTLQKE--VRSAILGRRELVT----DSDGKQIISVANTND 57
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
P+P+ G +V +V +V + +I+ + + ++ F I + D+ + + D
Sbjct: 58 FIPLPQVGDLVTCKVYRVTFNVIYCNIILLNNRPIKNSFRAFINKSDIHVYDGELGDNFE 117
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLV 172
F+ GDI+RA VLS+G +Y LST +DLGV+ A S G+++
Sbjct: 118 CFKQGDIIRAKVLSVGQHGSYKLSTVGSDLGVILALSEKGQIM 160
>gi|219122148|ref|XP_002181414.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407400|gb|EEC47337.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 248
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 87/190 (45%), Gaps = 39/190 (20%)
Query: 11 VTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTL--------------------- 49
V PG+ LG +++ G G YV G VYAS TG L
Sbjct: 29 VVPGDRLGTIRQIQPGPGTYV--RAGHVYASTTGTLSVSSSEAAVAATATATSSAKPTTT 86
Query: 50 ----SPPPDSPDQRPTVEVTGHKAHGPVPEP----GSVVIARVTKVMTRMA-----SADI 96
S P D+ V + GP G VV+ARV ++ + A +AD
Sbjct: 87 TTTTSAPEDALVW---AIVQARSSQGPASTTVLTVGRVVLARVVRITRQQAVLEILAADG 143
Query: 97 MCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAK 156
+ ++ + G I ++DVR + + M SF PGD+V A VLSLGD+R Y+L+TA+
Sbjct: 144 VTTATATLLHRPEGAIHREDVRDGPSEPIRMQDSFLPGDLVLARVLSLGDSRRYYLTTAE 203
Query: 157 NDLGVVSAES 166
+LGV+ A S
Sbjct: 204 PELGVLHALS 213
>gi|258567054|ref|XP_002584271.1| hypothetical protein UREG_04960 [Uncinocarpus reesii 1704]
gi|237905717|gb|EEP80118.1| hypothetical protein UREG_04960 [Uncinocarpus reesii 1704]
Length = 262
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 42/144 (29%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCV--------------------------------- 99
+P GS+V+ RVT+V R A+ I+ V
Sbjct: 100 LPTVGSIVLGRVTRVQKRQATISILLVLPDQRATPTLDAEGASDADLPSILASASISTAS 159
Query: 100 ---GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAK 156
A +R + +IR++DVRA E D+V + SFR GDIVRA ++S+GD AY+ STA
Sbjct: 160 DSLNADELRPQ--ALIRKEDVRAVEKDRVVVEESFRVGDIVRAVIVSVGDQVAYYASTAG 217
Query: 157 NDLGVVSAESTA----GKLVYCIS 176
N+LGVV A S+A G +++ +S
Sbjct: 218 NELGVVMARSSADEGGGNMMFPVS 241
>gi|331236854|ref|XP_003331085.1| hypothetical protein PGTG_13048 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309310075|gb|EFP86666.1| hypothetical protein PGTG_13048 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 198
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGL-LRTLSPPPDSPDQRPTVEVTGHK 68
L+T E AT + G G + + G VYAS+ G +R T+ V
Sbjct: 19 LITSDESQPSAT-YQCGPGTF--ERQGKVYASVVGQPVRNAG----------TISVECSS 65
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADIMCVG--AKSVREKFSGIIRQQDVRATEIDKVD 126
VP G++VI +TKV A I+ V V ++ G IR QDVR + DKV
Sbjct: 66 RCAKVPVVGTIVIGMITKVTKPQAHVSIIMVDDLPLPVGQELQGAIRSQDVRQVDKDKVI 125
Query: 127 MHLSFRPGDIVRASVLSL-GDARAYFLSTAKNDLGVVSAE-STAGKLVYCISKYDL 180
+ +RPGDIVRA V+SL A Y L+T +N LGVV A+ S G + IS ++
Sbjct: 126 IWDCYRPGDIVRAEVISLPTSAMGYLLATFRNHLGVVFAQHSQTGNRMTAISWKEM 181
>gi|403178800|ref|XP_003337173.2| hypothetical protein PGTG_18773 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164480|gb|EFP92754.2| hypothetical protein PGTG_18773 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 243
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGL-LRTLSPPPDSPDQRPTVEVTGHK 68
L+T E AT + G G + + G VYAS+ G +R T+ V
Sbjct: 64 LITSDESQPSAT-YQCGPGTF--ERQGKVYASVVGQPVRNAG----------TISVECSS 110
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADIMCVG--AKSVREKFSGIIRQQDVRATEIDKVD 126
VP G++VI +TKV A I+ V V ++ G IR QDVR + DKV
Sbjct: 111 RCAKVPVVGTIVIGMITKVTKPQAHVSIIMVDDLPLPVGQELQGAIRSQDVRQVDKDKVI 170
Query: 127 MHLSFRPGDIVRASVLSL-GDARAYFLSTAKNDLGVVSAE-STAGKLVYCISKYDL 180
+ +RPGDIVRA V+SL A Y L+T +N LGVV A+ S G + IS ++
Sbjct: 171 IWDCYRPGDIVRAEVISLPTSAMGYLLATFRNHLGVVFAQHSQTGNRMTAISWKEM 226
>gi|119174805|ref|XP_001239731.1| hypothetical protein CIMG_09352 [Coccidioides immitis RS]
Length = 271
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 66/133 (49%), Gaps = 40/133 (30%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCV--------------------------------- 99
+P GS+V+ RVT+V R A+ I+ V
Sbjct: 100 LPTVGSIVLGRVTRVQRRQATISILLVLPENQQLNPSADDSEDPSDADLPSILASASIST 159
Query: 100 -----GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLST 154
A +R + +IR++DVRA E D+V M SFR GDIVRA ++S+GD AY+ ST
Sbjct: 160 TSDSLNADELRPQ--ALIRKEDVRAVEKDRVVMEESFRVGDIVRAVIVSVGDQVAYYAST 217
Query: 155 AKNDLGVVSAEST 167
A N+LGVV A S+
Sbjct: 218 AGNELGVVMARSS 230
>gi|392869923|gb|EAS28464.2| exosome complex subunit Csl4 [Coccidioides immitis RS]
Length = 341
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 66/133 (49%), Gaps = 40/133 (30%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCV--------------------------------- 99
+P GS+V+ RVT+V R A+ I+ V
Sbjct: 100 LPTVGSIVLGRVTRVQRRQATISILLVLPENQQLNPSADDSEDPSDADLPSILASASIST 159
Query: 100 -----GAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLST 154
A +R + +IR++DVRA E D+V M SFR GDIVRA ++S+GD AY+ ST
Sbjct: 160 TSDSLNADELRPQ--ALIRKEDVRAVEKDRVVMEESFRVGDIVRAVIVSVGDQVAYYAST 217
Query: 155 AKNDLGVVSAEST 167
A N+LGVV A S+
Sbjct: 218 AGNELGVVMARSS 230
>gi|84999398|ref|XP_954420.1| 3'-5' exoribonuclease (CSL4 ) [Theileria annulata]
gi|65305418|emb|CAI73743.1| 3'-5' exoribonuclease (CSL4 homologue), putative [Theileria
annulata]
Length = 180
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 14/172 (8%)
Query: 5 EEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV 64
E+ MVL PG ++G + YV + ++Y+++ G L S + V V
Sbjct: 2 EKGMVL--PGMMIGTTNDYVPLNNVYV--RDSVIYSAVLGNL--------SFSENKGVSV 49
Query: 65 TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDK 124
+ H +P G+ VIA++T+V A +I+ V + +++ F G + +V ++ +
Sbjct: 50 VSN--HVKIPYVGATVIAQITRVHINKADCNIISVDGRVLKDFFKGSLTNNNVLESKNIE 107
Query: 125 VDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
+ M+ FRPGD ++ V+ GD + + LSTA LGV+ S+ G+ + IS
Sbjct: 108 ILMYEWFRPGDFIKCKVIYAGDGKQFTLSTAGLGLGVIKTTSSKGEEMVPIS 159
>gi|124511936|ref|XP_001349101.1| 3'-5' exoribonuclease Csl4 homolog, putative [Plasmodium falciparum
3D7]
gi|23498869|emb|CAD50947.1| 3'-5' exoribonuclease Csl4 homolog, putative [Plasmodium falciparum
3D7]
Length = 195
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 5 EEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV 64
E++ +V PGE LG E G Y+ K + +S+ G + ++ + D++ + V
Sbjct: 4 EDDDDIVIPGEFLGLQAEYINGNNTYLLKDE--IRSSILGQ-KIINK---NNDKKTIISV 57
Query: 65 TGHKAHG-PVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
K +P+ G +VI +V +V M I+ + G I + D+ E +
Sbjct: 58 YNLKPPSLYLPKIGDIVICKVQRVSFHMIYCYILSSHNIFTKNALKGFILKSDIHINEGE 117
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLV 172
D + F+ GDI++A VLS+G +Y LST ++LGV++A + G+++
Sbjct: 118 LGDNFICFKQGDIIKAKVLSIGQYSSYKLSTVGSELGVIAAFNQKGEIL 166
>gi|449017378|dbj|BAM80780.1| similar to 3'-5' exoribonuclease CSL4 [Cyanidioschyzon merolae
strain 10D]
Length = 213
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHN---GLVYASLTGLLRTLSPPPDSPDQRPTVEVT- 65
V PGEV G A E+ K + +YA + + + + TV+
Sbjct: 51 FVLPGEVTGNAEELAYNASGVFYKWDLELRSLYAGVLTCSEQCATSAKAAQRLATVQCDL 110
Query: 66 -----GHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRAT 120
KA +P PG VIA V +V R A+A I+ VG + +F G++RQQD++
Sbjct: 111 ENPRGDQKASALIPRPGKRVIAVVLRVNRRQATALILHVGTVPAKSEFIGVVRQQDIQED 170
Query: 121 EIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTA 155
D V ++ +PGD++ A VLS + + Y+L A
Sbjct: 171 NWDSVRVYDHLQPGDLIAAVVLSDLEQKHYYLRVA 205
>gi|156085926|ref|XP_001610372.1| hypothetical protein [Babesia bovis T2Bo]
gi|154797625|gb|EDO06804.1| conserved hypothetical protein [Babesia bovis]
Length = 143
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 57/100 (57%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P G++VIA+V ++ + A I+C+ +S+ E G+I ++ ++ + ++ F
Sbjct: 26 IPAVGAIVIAQVQRISHQQAECCIVCLEGRSIPEGLKGVISLSNIYQSKAIEPKIYECFH 85
Query: 133 PGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLV 172
PGD VRA V+S D + LSTA+ DLGV+ +LV
Sbjct: 86 PGDFVRAKVISTSDTKQLMLSTAQKDLGVIRVPEAGEELV 125
>gi|358340355|dbj|GAA48265.1| exosome complex component CSL4 [Clonorchis sinensis]
Length = 297
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 55/83 (66%)
Query: 62 VEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATE 121
VE+ KA G VP G++V+A+V+ + R+ D++ VG + F G++R++D+RAT+
Sbjct: 91 VELVPLKAPGVVPYAGAIVLAKVSSLSRRIVRCDVVAVGNTPLAGPFRGMLRREDIRATQ 150
Query: 122 IDKVDMHLSFRPGDIVRASVLSL 144
D+ + +RPGD++RA V++L
Sbjct: 151 RDQAEPAQCYRPGDLIRARVINL 173
>gi|402584129|gb|EJW78071.1| hypothetical protein WUBG_11019 [Wuchereria bancrofti]
Length = 241
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 11 VTPGEVLGKATE-VKAGKGAYVAKHNGLVYASLTGLLR---------------------T 48
V PG+ L +E +KAG G Y + G +YASL G L
Sbjct: 26 VIPGDRLFPISEQLKAGIGTY--ELFGHIYASLAGALHMYATVENLRGHGRVSLREENFN 83
Query: 49 LSPPPDSPDQRPTV-----EVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKS 103
L D+ + E K H +P G + A+V + R A I CV
Sbjct: 84 LRESNLQRDKETKIVEVRRESEKEKRH-VMPYVGCIATAKVQNIGQRFAKCTIHCVECSV 142
Query: 104 VREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDAR-AYFLSTAKNDLGVV 162
+ +F+GI+R++D+ E +KV + PGD++ A V+ GD + +Y LS +++LGVV
Sbjct: 143 LSHEFNGILRKEDIMPIEKEKVKLDQCIHPGDVILARVIGFGDNQHSYLLSIVEDELGVV 202
Query: 163 SAESTAG-KLVYC 174
S G +++ C
Sbjct: 203 SGIGDLGERMIPC 215
>gi|432098414|gb|ELK28213.1| Exosome complex component CSL4 [Myotis davidii]
Length = 197
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 6/121 (4%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G + P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCMTKSC----ENGALPVVSVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ G++V +V+ + +R A I+ VG+ ++ F G IR++D+RATE DKV+++ SFR
Sbjct: 64 LPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDLRATEKDKVEIYKSFR 123
Query: 133 P 133
P
Sbjct: 124 P 124
>gi|326436139|gb|EGD81709.1| hypothetical protein PTSG_02420 [Salpingoeca sp. ATCC 50818]
Length = 178
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 58/111 (52%), Gaps = 13/111 (11%)
Query: 9 VLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHK 68
VLVTPG L + AG+G Y+ +G +YASL G P DS D +P + +
Sbjct: 16 VLVTPGTRLAPQSTHVAGEGTYL--RDGYIYASLVGQRVETKKPEDSKDTKPVISI---- 69
Query: 69 AHGP------VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIR 113
H P VP G+VV +V + R A I+CVGA +++ FSGIIR
Sbjct: 70 -HRPGQIASLVPTVGTVVTCKVISMNPRFAKTKILCVGAVPLQQSFSGIIR 119
>gi|268324527|emb|CBH38115.1| conserved hypothetical protein [uncultured archaeon]
Length = 187
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 5 EEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV 64
E+E +V PG+ LG + E G G Y G +YAS+TG + S + ++V
Sbjct: 2 EKEEGIVVPGDFLGTSEEFTPGMGVY--DETGNIYASVTGEI--------SISDKRVIDV 51
Query: 65 TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE---KFSGIIRQQDVRATE 121
PVPE G VVI R+ + +A +I V K RE II ++++
Sbjct: 52 LPKVGTPPVPEEGDVVIGRIEDLRDAVAVVNIARVEGKGDREVAASTQAIIHISNIKSGY 111
Query: 122 IDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
+ ++ + D+V+A VL DA+A LST NDLGV+ A
Sbjct: 112 VSELQREFGYL--DLVKAKVL---DAKALRLSTEGNDLGVIKA 149
>gi|26451011|dbj|BAC42612.1| unknown protein [Arabidopsis thaliana]
Length = 86
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 2/49 (4%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQ 58
LVTPG+V+GKATE KAGKGAYV ++ +YASLTG R +SP P+S DQ
Sbjct: 5 LVTPGDVIGKATEFKAGKGAYV--NDATIYASLTGTCRIVSPLPESIDQ 51
>gi|148709922|gb|EDL41868.1| exosome component 1, isoform CRA_c [Mus musculus]
Length = 164
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 77/170 (45%), Gaps = 48/170 (28%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S +G
Sbjct: 20 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLMKTS------------------ENGA 59
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
VP V VM RE S ++ DV A KV+++ SFR
Sbjct: 60 VP---------VVSVM----------------RETESQLL--PDVGAVVTCKVEIYKSFR 92
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAGKLVYCISKYDLN 181
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G + IS ++
Sbjct: 93 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQ 142
>gi|257096005|ref|NP_001158033.1| exosome complex component CSL4 isoform 2 [Mus musculus]
gi|12833277|dbj|BAB22465.1| unnamed protein product [Mus musculus]
Length = 154
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 72/158 (45%), Gaps = 48/158 (30%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S +G
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLMKTS------------------ENGA 49
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
VP V VM RE S ++ DV A KV+++ SFR
Sbjct: 50 VP---------VVSVM----------------RETESQLL--PDVGAVVTCKVEIYKSFR 82
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 83 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 120
>gi|149040181|gb|EDL94219.1| rCG57589, isoform CRA_d [Rattus norvegicus]
Length = 118
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L S P V V
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCLTKTS----ENGALPVVSVMRETESQL 63
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKV 125
+P+ G+VV +V+ + +R A I+ VG+ ++ F G IR++D+RATE DKV
Sbjct: 64 LPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKV 116
>gi|348588122|ref|XP_003479816.1| PREDICTED: exosome complex component CSL4-like isoform 2 [Cavia
porcellus]
Length = 154
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 72/158 (45%), Gaps = 48/158 (30%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L T +G
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCL------------------TKRSENGA 49
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P V VM RE S ++ DV A KV+++ SFR
Sbjct: 50 LP---------VVSVM----------------RETESQLL--PDVGAIVTCKVEIYKSFR 82
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 83 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 120
>gi|354471140|ref|XP_003497801.1| PREDICTED: exosome complex component CSL4-like isoform 2
[Cricetulus griseus]
Length = 154
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 72/158 (45%), Gaps = 48/158 (30%)
Query: 13 PGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGP 72
PGE L E G G Y +G +++SL G L T +G
Sbjct: 10 PGERLCNLEEGSPGSGTYT--RHGYIFSSLAGCL------------------TKTSENGA 49
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P V VM RE S ++ DV A KV+++ SFR
Sbjct: 50 LP---------VVSVM----------------RETESQLL--PDVGAVVTCKVEIYKSFR 82
Query: 133 PGDIVRASVLSLGDARA-YFLSTAKNDLGVVSAESTAG 169
PGDIV A V+SLGDA++ Y L+TA+N+LGVV A S +G
Sbjct: 83 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG 120
>gi|399216674|emb|CCF73361.1| unnamed protein product [Babesia microti strain RI]
Length = 146
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 75 EPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLS--FR 132
E GSVV+AR+TK+ DI+C+G R + G+I D+ + D+ + F
Sbjct: 10 EVGSVVMARITKLYPDKVECDILCIGDVPSRSRCKGVIALSDIFTENVTLEDVKTTECFM 69
Query: 133 PGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKLVYCIS 176
PGD++RA VLSL D + L T+ GV+ A S G + IS
Sbjct: 70 PGDLIRARVLSLVDRQQIILGTSGPSYGVIRAFSKNGYEMRAIS 113
>gi|17555992|ref|NP_499416.1| Protein EXOS-1 [Caenorhabditis elegans]
gi|3881058|emb|CAA19529.1| Protein EXOS-1 [Caenorhabditis elegans]
Length = 208
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 10 LVTPGE-VLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHK 68
LV PG+ VL E + GKG Y A N ++AS+ G + S + +EV +
Sbjct: 6 LVAPGDKVLDAIGEYRMGKGLYEA--NRRIFASVAGFVNVYGFRDKSDNLVQVIEVRRSE 63
Query: 69 A---HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKV 125
+ +P G++V A+V V R A DI+ +G K +++FS ++ ++ +R E +
Sbjct: 64 DQLDNELLPFHGAIVTAKVMAVGLRFAKCDIISIGDKVYKKRFSALLPKKKLRPLEPELS 123
Query: 126 DMHLSF-RPGDIVRASVLSLGDARAYF-LSTAKNDLGVVSAESTAGKLVYCISKYDLNII 183
+ +F RP D + A V + + F LS A+++LGVV G+ + K D N +
Sbjct: 124 EPFKNFVRPNDYILAKVCEDAEIKDKFVLSIAEDELGVVLCR---GRFGEPMQKVDWNTV 180
Query: 184 L 184
+
Sbjct: 181 V 181
>gi|268574534|ref|XP_002642245.1| C. briggsae CBR-EXOS-1 protein [Caenorhabditis briggsae]
Length = 207
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 11/181 (6%)
Query: 10 LVTPGE-VLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV---T 65
LV PG+ VL + + K G G Y + N +++S+ G + S + +EV
Sbjct: 6 LVAPGDKVLDRIGDYKMGNGLY--ETNRRIFSSIAGFVNVYGFRDKSDNLIQVIEVRRSE 63
Query: 66 GHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKV 125
+ +P G+VV A+V V R A DI+ +G K +++FS ++ ++ +R E +
Sbjct: 64 DQMDNELLPFSGAVVTAKVMAVGLRFAKCDIISIGDKVYKKRFSALLPKKKLRPLEPELS 123
Query: 126 DMHLSF-RPGDIVRASVL-SLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLNII 183
D +F RP D + A V G + LS A+++LGVV GK + K D N +
Sbjct: 124 DPFKNFVRPNDYILAKVCEDAGIKDKFVLSIAEDELGVVLCR---GKFGEPMKKVDWNTV 180
Query: 184 L 184
+
Sbjct: 181 V 181
>gi|308497492|ref|XP_003110933.1| CRE-EXOS-1 protein [Caenorhabditis remanei]
gi|308242813|gb|EFO86765.1| CRE-EXOS-1 protein [Caenorhabditis remanei]
Length = 213
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 11/181 (6%)
Query: 10 LVTPGE-VLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV---T 65
LV PG+ VL + K G G Y A N VYAS+TG + + + +EV
Sbjct: 6 LVAPGDKVLDGIGDYKMGNGLYEA--NRRVYASVTGYVNVYGFRDKTDNLVQVIEVRRSE 63
Query: 66 GHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKV 125
+ +P G+VV A+V V R A DI+ +G K +++FS ++ ++ +R E +
Sbjct: 64 NQLDNELLPFNGAVVTAKVMAVGLRFAKCDIISIGDKVYKKRFSALLPKKKLRPLEPELS 123
Query: 126 DMHLSF-RPGDIVRASVL-SLGDARAYFLSTAKNDLGVVSAESTAGKLVYCISKYDLNII 183
+ +F RP D + A V G + LS A+++LGVV GK + K D N +
Sbjct: 124 EPFKNFVRPNDYILAKVCDDAGIKDKFVLSIAEDELGVVLCR---GKYGEPMQKVDWNTV 180
Query: 184 L 184
+
Sbjct: 181 V 181
>gi|224011295|ref|XP_002295422.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583453|gb|ACI64139.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 235
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 38/196 (19%)
Query: 11 VTPGEVLGKA------TEVKAGKGAYVAKHNGLVYASLTGLL------------RTLSPP 52
++PGE LG T + AGKG YV + G + ASL G L +S
Sbjct: 14 ISPGERLGNTLLSRDKTTLIAGKGTYVRQ--GQLVASLLGTLCAHHQADGDEERWIISIE 71
Query: 53 PDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMT-RMASADIMCVGAKS-------- 103
P+ QR + ++ P+ G VV+ RVT+V+ A DI+ + +
Sbjct: 72 PEQKKQRSQSSYVKNSSN-ICPQVGDVVLGRVTRVVRPSHAMVDIIAIVPEQTTTSNNNT 130
Query: 104 -----VREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKND 158
+ E +SG +RQ ++R ++++ RP D++ A V + G+ + Y L+TA+ +
Sbjct: 131 PFIQPLHEPYSGTLRQNEIRPNSSLEIEISECIRPSDVILARVHASGE-KDYILTTAEAE 189
Query: 159 LGVVSA--ESTAGKLV 172
LGV+ A ES+ ++V
Sbjct: 190 LGVIQAVCESSGREMV 205
>gi|375082270|ref|ZP_09729336.1| exosome complex RNA-binding protein Csl4 [Thermococcus litoralis
DSM 5473]
gi|374743027|gb|EHR79399.1| exosome complex RNA-binding protein Csl4 [Thermococcus litoralis
DSM 5473]
Length = 199
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 36/175 (20%)
Query: 3 VKEEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLR--------TLSPPPD 54
VK+ ++VL PG+ LG E G+G + + NG +YA+ G +R ++ P D
Sbjct: 9 VKDGDIVL--PGDYLGVIEEFLPGEG--IIEENGELYAARAGRVRINPEKIEISVEPLTD 64
Query: 55 SPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV-GAKSVRE----KFS 109
+P P+P+ G VVIARV +V + A ++ + G K RE K +
Sbjct: 65 TP---------------PLPQVGDVVIARVIEVKPQAAIVQLLRIEGRKGYREIATSKLA 109
Query: 110 GIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
GI Q VR ++ M F+ GDIVRA VL+ + L+T +DLGVV A
Sbjct: 110 GIHISQ-VRDGYVE--SMSNEFKIGDIVRARVLT-NEKSPIQLTTKGSDLGVVYA 160
>gi|242398483|ref|YP_002993907.1| RNA-binding protein, containing S1 domain [Thermococcus sibiricus
MM 739]
gi|242264876|gb|ACS89558.1| RNA-binding protein, containing S1 domain [Thermococcus sibiricus
MM 739]
Length = 199
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 34/175 (19%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLR--------TLSPPPDSPDQRPT 61
LV PG+ LG E G+G V + NG +YA+ G ++ ++ P D P
Sbjct: 14 LVLPGDYLGVIEEFLPGEG--VIEENGELYAARMGRVKIDLEKIEISVEPVTDVP----- 66
Query: 62 VEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV-GAKSVRE----KFSGIIRQQD 116
P+P+ G +VIARV +V ++ A +++ + G K RE K +GI Q
Sbjct: 67 ----------PLPQVGDIVIARVLEVKSQAAIVELLKIEGRKGYREIATSKLAGIHVSQ- 115
Query: 117 VRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTAGKL 171
V+ ++ M+ F+ GDIVRA VL+ + L+T + DLGV+ A ++ K+
Sbjct: 116 VKDGYVE--SMNSEFKIGDIVRAKVLT-NNKSPIQLTTREPDLGVIYALCSSCKV 167
>gi|401887285|gb|EJT51278.1| S1 CSL4 protein [Trichosporon asahii var. asahii CBS 2479]
gi|406695583|gb|EKC98886.1| S1 CSL4 protein [Trichosporon asahii var. asahii CBS 8904]
Length = 158
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 42/142 (29%)
Query: 24 KAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIAR 83
KAG G Y ++NG + +S+ G RP + + + VI +
Sbjct: 24 KAGAGCY--EYNGTILSSIVG--------------RPRRDGATN----------AQVIGQ 57
Query: 84 VTKVMTRMASADIMCVGAKSV---REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRAS 140
V+++ + A I V V E+ +G+I+ M FR GDIV+A
Sbjct: 58 VSRLSPQQAHIVIQVVNNHPVPESSEELTGVIK-------------MGECFRLGDIVKAK 104
Query: 141 VLSLGDARAYFLSTAKNDLGVV 162
VLSLGDAR+Y+LSTA N+LG+
Sbjct: 105 VLSLGDARSYYLSTAANELGLT 126
>gi|444708223|gb|ELW49315.1| Exosome complex component CSL4 [Tupaia chinensis]
Length = 126
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 26 GKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVT 85
G G Y +G +++SL G L S P + VT +P+ G++V +V+
Sbjct: 14 GSGTYT--RHGYIFSSLAGSLTKSS----ENGALPVISVTRETESQLLPDVGAIVTCKVS 67
Query: 86 KVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDK 124
+ +R A I+ VG+ ++ F G IR++DVRATE DK
Sbjct: 68 SINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDK 106
>gi|397617763|gb|EJK64592.1| hypothetical protein THAOC_14660 [Thalassiosira oceanica]
Length = 233
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 29/180 (16%)
Query: 11 VTPGEVLGKATEVK----AGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQ---RPTVE 63
VTPG+ LG A+ + AG G Y+ G +YAS G L + D+ V
Sbjct: 20 VTPGDRLGIASRGRVRLLAGGGCYL--RQGQLYASQLGTLGAHRHGDSTTDEGVVSWIVN 77
Query: 64 VTGHKAHGPV-------PEPGSVVIARVTKV-MTRMASADIMCVGAKS-----------V 104
V + G + P+ G VVI RVT+V A D++ + ++
Sbjct: 78 VNSERGAGLMAMAVSAGPQIGMVVIGRVTRVNRPSHALVDMVAIVPEAKDGSTDQAIVPF 137
Query: 105 REKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
E FSG +RQ ++R +V++ RPGD++ A V + G+ R + L+TA+ +LGV+ A
Sbjct: 138 PEPFSGTLRQNEIRPKSSLEVEIAECIRPGDVILARVHANGE-RDFILTTAEAELGVIQA 196
>gi|212223523|ref|YP_002306759.1| exosome complex RNA-binding protein Csl4 [Thermococcus onnurineus
NA1]
gi|212008480|gb|ACJ15862.1| RNA-binding protein [Thermococcus onnurineus NA1]
Length = 195
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 79/159 (49%), Gaps = 17/159 (10%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
LV PG+ LG E G+G V + NG +YA G +R PD R + +
Sbjct: 12 LVLPGDYLGVIEEYLPGEG--VKEENGELYAIRAGKVRI------DPD-RMEISIEPVTD 62
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE----KFSGIIRQQDVRATEIDKV 125
P+P+ G VVIA+V +V + A ++ + ++ RE K +GI Q VR ++
Sbjct: 63 TPPLPQIGDVVIAKVIEVKPQAAIVQLVKIEGRNDREIATSKLAGIHVSQ-VRDGYVE-- 119
Query: 126 DMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
M F+ GDIVRA V++ + LST DLGV+ A
Sbjct: 120 SMTNEFKIGDIVRAKVIA-NEKSPIQLSTKGYDLGVIYA 157
>gi|268325874|emb|CBH39462.1| hypothetical protein BSM_29410 [uncultured archaeon]
Length = 186
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 77/168 (45%), Gaps = 30/168 (17%)
Query: 5 EEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQR----- 59
E EMVL PG+ LG + E G G Y G +YA G + D+R
Sbjct: 2 ESEMVL--PGDFLGTSEEYILGDGVY--DDEGNLYALYIGDVSI-------SDKRVISVV 50
Query: 60 PTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFS---GIIRQQD 116
P VE PV + G VVI ++ + +A I CV K RE + GII +
Sbjct: 51 PKVETP------PVIKDGDVVIGQIGDIKDTVAVVSIACVEGKENREIAAVNQGIIHISN 104
Query: 117 VRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
VR ++++ + D+V+A V+ DA+A LST +LGVV A
Sbjct: 105 VRNGYVNELRQEFGYL--DVVKAKVI---DAKALRLSTEGKELGVVKA 147
>gi|154338024|ref|XP_001565238.1| putative Csl4p homologue [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134062285|emb|CAM36674.1| putative Csl4p homologue [Leishmania braziliensis MHOM/BR/75/M2904]
gi|449310624|gb|AGE92539.1| Csl4p-like protein [Leishmania braziliensis]
Length = 281
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 60/139 (43%), Gaps = 28/139 (20%)
Query: 47 RTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE 106
R PP S TV + H GP PG +V R+T++ A +++ V +
Sbjct: 106 RGTGAPPGS-----TVSSSRHTVLGP--RPGDIVHLRITRLNRLFAFGEVIAVNWRWCSH 158
Query: 107 K----------------FSGIIRQQDVRATEIDKVDM-----HLSFRPGDIVRASVLSLG 145
+ F G++RQ+D+R + K + LSF PGD+V A V+S
Sbjct: 159 RSLSSAAAGGGGNNSGVFKGVLRQEDIRPFKPSKDQLLPPPPSLSFGPGDVVLAEVISQS 218
Query: 146 DARAYFLSTAKNDLGVVSA 164
D Y LST GVV +
Sbjct: 219 DVHQYQLSTISEGCGVVES 237
>gi|341878804|gb|EGT34739.1| CBN-EXOS-1 protein [Caenorhabditis brenneri]
Length = 226
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 10 LVTPGE-VLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHK 68
LV PG+ VL + G G Y A N ++AS+ G ++ S + +EV +
Sbjct: 7 LVAPGDKVLDSIGNYRMGNGLYEA--NRRIFASVAGYVKVYGHKDKSDNLVQVIEVRRSE 64
Query: 69 ---AHGPVPEPGSVVIARVTKV--------------MTRMASADIMCVGAKSVREKFSGI 111
+ +P G+VV A+V V +R A DI+ +G + +++FS +
Sbjct: 65 DQLENELLPYDGAVVTAKVMAVGLRYRHFFILYLRDHSRFAKCDIISIGDRVYKKRFSAL 124
Query: 112 IRQQDVRATEIDKVDMHLSF-RPGDIVRASVL-SLGDARAYFLSTAKNDLGVVSAESTAG 169
+ ++ +R E + + +F RP D + A V G + LS A+++LGVV G
Sbjct: 125 LPKKKLRPLEPELSEPFKNFVRPNDYILAKVCDDAGIKDKFVLSIAEDELGVVLCR---G 181
Query: 170 KLVYCISKYDLNIIL 184
K + K D N ++
Sbjct: 182 KFGETMKKVDWNTVV 196
>gi|240103062|ref|YP_002959371.1| exosome complex RNA-binding protein Csl4 [Thermococcus
gammatolerans EJ3]
gi|239910616|gb|ACS33507.1| RNA-binding protein, containing S1 RNA binding domain [Thermococcus
gammatolerans EJ3]
Length = 195
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 35/173 (20%)
Query: 4 KEEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLR--------TLSPPPDS 55
KE E+VL PG+ LG E G+G V + NG + A+ G ++ ++ P D+
Sbjct: 8 KEGELVL--PGDYLGVIEEYLPGEG--VKEENGNLIATRAGRVKINREKMEISVEPVTDT 63
Query: 56 PDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE----KFSGI 111
P P+PE G V+A+V +V ++ ++ + K RE K +GI
Sbjct: 64 P---------------PLPEVGDTVLAQVLEVKPQVVIVQLLRIEGKGSREIATSKLAGI 108
Query: 112 IRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
Q V+ ++ DM F+ GDIVRA V+S + L+T DLGVV A
Sbjct: 109 HVSQ-VKNGFVE--DMSREFKVGDIVRARVIS-NEKSPIQLTTRAPDLGVVYA 157
>gi|449310648|gb|AGE92551.1| Csl4p-like protein [Leishmania braziliensis]
Length = 281
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 28/139 (20%)
Query: 47 RTLSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE 106
R PP S TV + H GP PG V R+T++ A +++ V +
Sbjct: 106 RGTGAPPGS-----TVSSSRHTVLGP--RPGDTVHLRITRLNRLFAFGEVIAVNWRWCSH 158
Query: 107 K----------------FSGIIRQQDVRATEIDKVDM-----HLSFRPGDIVRASVLSLG 145
+ F G++RQ+D+R + K + LSF PGD+V A V+S
Sbjct: 159 RSLSSAATGGGGNNSGVFKGVLRQEDIRPFKPSKDQLLPPPPSLSFGPGDVVLAEVISQS 218
Query: 146 DARAYFLSTAKNDLGVVSA 164
D Y LST GVV +
Sbjct: 219 DVHQYQLSTISEGCGVVES 237
>gi|401882864|gb|EJT47105.1| hypothetical protein A1Q1_04179 [Trichosporon asahii var. asahii
CBS 2479]
Length = 211
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 75/179 (41%), Gaps = 61/179 (34%)
Query: 24 KAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRP-----TVEVTGHKAHGPVPEPGS 78
+ G G Y + G + AS+ G RP V V G G VPE GS
Sbjct: 23 QCGPGCY--ESQGRILASIVG--------------RPHRDGAVVSVIGKAEAGVVPEIGS 66
Query: 79 VV-----------IARVTKVMTRMASADIMCVGAKSV---REKFSGIIRQQDVRATEIDK 124
+V ++ ++ + A I V + V E+ +G+++
Sbjct: 67 IVGYPLLVCAASSNTQIARLSPQQAHVVIQIVNDRPVADSTEELTGVVK----------- 115
Query: 125 VDMHLSFRPGDIVRASV-------------LSLGDARAYFLSTAKNDLGVVSAESTAGK 170
M FR GDIV+A V LSLGDAR+Y+LSTA N+LGVV A S G+
Sbjct: 116 --MGECFRLGDIVKAKVVSHALVLFCSSPQLSLGDARSYYLSTAANELGVVYATSEDGE 172
>gi|223478609|ref|YP_002583387.1| RNA-binding protein [Thermococcus sp. AM4]
gi|214033835|gb|EEB74661.1| RNA-binding protein, containing S1 domain [Thermococcus sp. AM4]
Length = 195
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 35/173 (20%)
Query: 4 KEEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLR--------TLSPPPDS 55
KE E+VL PG+ LG E G+G V + NG + A+ G +R ++ P D+
Sbjct: 8 KEGELVL--PGDYLGVIEEYLPGEG--VKEENGNLIATRAGKVRINRERMEISVEPVTDT 63
Query: 56 PDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE----KFSGI 111
P P+PE G V+A+V +V ++ ++ + K RE K +GI
Sbjct: 64 P---------------PLPEVGDTVLAQVLEVKPQVVIVQLLRIEGKGSREIATSKLAGI 108
Query: 112 IRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
Q V+ ++ DM F+ GDIVRA V+S + L+T +LGVV A
Sbjct: 109 HVSQ-VKNGFVE--DMGKEFKVGDIVRARVIS-NEKSPIQLTTRAPELGVVYA 157
>gi|282164175|ref|YP_003356560.1| putative 3'-5' exoribonuclease [Methanocella paludicola SANAE]
gi|282156489|dbj|BAI61577.1| putative 3'-5' exoribonuclease [Methanocella paludicola SANAE]
Length = 188
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
V PG+++G + E GKG Y + N +YA +TG L T S P +
Sbjct: 7 FVIPGDMIGTSEEFLPGKGTYEDRGN--IYAIMTGRL-TYDKKERSVSVDPVTNIP---- 59
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE---KFSGIIRQQDVRATEIDKVD 126
P P+ G +VI RVT + +A ++ + RE I +V+ + + D
Sbjct: 60 --PTPKEGDIVIGRVTDIKGSVALVELSRIKGHLDREIAGNTQAAIHISNVKDSYVQ--D 115
Query: 127 MHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAE 165
+ F DIV+A V+ D R LST +LGV++++
Sbjct: 116 LAREFGYQDIVKAKVI---DTRNMRLSTVDKNLGVLTSQ 151
>gi|147921606|ref|YP_684577.1| hypothetical protein LRC269 [Methanocella arvoryzae MRE50]
gi|110619973|emb|CAJ35251.1| conserved hypothetical protein [Methanocella arvoryzae MRE50]
Length = 187
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 17/161 (10%)
Query: 7 EMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTG 66
E V PG+++G + E G G Y + NG +YA +TG + + ++ +E
Sbjct: 3 ENDFVVPGDLVGTSEEYLPGSGTY--EENGNIYADITGKIAI-----NKKERAVYIEPAV 55
Query: 67 HKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE---KFSGIIRQQDVRATEID 123
H PVP G +VI RVT + +A ++ + RE S I +V+ + +
Sbjct: 56 HAP--PVPREGDIVIGRVTDIKGSVALVELSRIKGHLDREIAGNTSAAIHISNVKDSYVQ 113
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
D+ F DIV+A V+ D + LST LGV+++
Sbjct: 114 --DLAQEFGYQDIVKARVI---DTKNMRLSTVDKSLGVLTS 149
>gi|18976424|ref|NP_577781.1| exosome complex RNA-binding protein Csl4 [Pyrococcus furiosus DSM
3638]
gi|397652232|ref|YP_006492813.1| exosome complex RNA-binding protein Csl4 [Pyrococcus furiosus COM1]
gi|18891956|gb|AAL80176.1| hypothetical protein PF0052 [Pyrococcus furiosus DSM 3638]
gi|393189823|gb|AFN04521.1| exosome complex RNA-binding protein Csl4 [Pyrococcus furiosus COM1]
Length = 197
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 23/168 (13%)
Query: 3 VKEEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTV 62
VK+ + VL PG+ LG E G+G V +G +Y++ G +R + V
Sbjct: 9 VKDGDFVL--PGDYLGVIEEYLPGEGVIV--EDGNLYSTRAGWVRI---------NKDKV 55
Query: 63 EVTGHKAHG--PVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE----KFSGIIRQQD 116
E++ A P+P+ G +V ARV + + ++ + K RE K +GI Q
Sbjct: 56 EISLEPASSTPPIPKVGDIVYARVIDIKQQAVLLKMIKIEGKGDREIAMSKLAGIHISQ- 114
Query: 117 VRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
V+ ++ D+ FR GDIVRA V++ + L+T DLGVV A
Sbjct: 115 VKDGFVE--DLRNEFRIGDIVRARVIT-DEKSPIQLTTKDPDLGVVYA 159
>gi|126465539|ref|YP_001040648.1| RNA-binding S1 domain-containing protein [Staphylothermus marinus
F1]
gi|126014362|gb|ABN69740.1| RNA binding S1 domain protein [Staphylothermus marinus F1]
Length = 188
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 13/160 (8%)
Query: 9 VLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHK 68
VLV PG+V+G E G+G YV NG Y + R L + T+ V
Sbjct: 8 VLVLPGDVIGVEEEYFPGQGVYV---NGKGYLRSQLIGRVLIDI-----VKRTINVRNIH 59
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVR-EKFSGIIRQQDVRATEIDKVDM 127
VP+ G +V V+ V +A DI + K R F+GI+ + I+ M
Sbjct: 60 GKPYVPKAGDIVEGIVSSVSEDLAFIDIYAIEEKPTRTTSFTGILHVSQASSEYIET--M 117
Query: 128 HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAEST 167
+ + R GDIVRA V++ + L+T + LGV++A T
Sbjct: 118 YDAMRIGDIVRARVIN--SNHPFQLTTKEPRLGVIAAFCT 155
>gi|315230253|ref|YP_004070689.1| hypothetical protein TERMP_00489 [Thermococcus barophilus MP]
gi|315183281|gb|ADT83466.1| hypothetical protein TERMP_00489 [Thermococcus barophilus MP]
Length = 200
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 34/168 (20%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLR--------TLSPPPDSPDQRPT 61
V PG+ LG E G G V + NG +Y++ G ++ ++ P D+P
Sbjct: 16 FVLPGDYLGVIEEFLPGDG--VIEENGELYSTRAGKVKINQEKMEISVVPVTDTP----- 68
Query: 62 VEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV-GAKSVRE----KFSGIIRQQD 116
P+P+ G +VIA+V +V + A ++ + G + RE K +GI Q
Sbjct: 69 ----------PIPKVGQIVIAKVIEVKPQAAIVQLLRIEGREDYREIATSKLAGIHISQ- 117
Query: 117 VRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
V+ ++ DM F+ GDIVRA VL+ + L+T DLGVV A
Sbjct: 118 VKEGFVE--DMSKEFKIGDIVRARVLT-DEKSPIQLTTRAPDLGVVFA 162
>gi|57641104|ref|YP_183582.1| exosome complex RNA-binding protein Csl4 [Thermococcus kodakarensis
KOD1]
gi|57159428|dbj|BAD85358.1| RNA-binding protein, containing S1 domain [Thermococcus
kodakarensis KOD1]
Length = 198
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 77/163 (47%), Gaps = 24/163 (14%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
LV PG+ LG E G G V + NG +YA+ G +R DS +VE
Sbjct: 12 LVLPGDYLGVIEEFLPGDG--VREENGELYATRAGKVRI-----DSDKMEISVEPVTDVP 64
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCV-GAKSVRE----KFSGIIRQQDVRATEIDK 124
P+P G VVI RV +V + I+ + G ++ RE K +GI +EI +
Sbjct: 65 --PLPRVGDVVIGRVVEVKPQAVIVQIISIEGRENDREIATSKLAGI------HISEIKE 116
Query: 125 ---VDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
D+ F+ GD++RA V++ + LST DLGVV A
Sbjct: 117 GFVEDITKEFKIGDVIRARVIA-NEKSPIQLSTKGPDLGVVYA 158
>gi|337285376|ref|YP_004624850.1| exosome complex RNA-binding protein Csl4 [Pyrococcus yayanosii CH1]
gi|334901310|gb|AEH25578.1| exosome complex RNA-binding protein Csl4 [Pyrococcus yayanosii CH1]
Length = 196
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
V PG+ LG E G G V + G +YA+ G++R ++P P +V
Sbjct: 13 FVLPGDYLGVIEEYLPGDG--VIEEEGNLYATRAGMVR-INPAKMEISVEPATDVP---- 65
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE----KFSGIIRQQDVRATEIDKV 125
P+P+ VV ARV +V ++ ++ + ++ RE K +GI Q V+ ++
Sbjct: 66 --PMPKVNDVVYARVIEVKSQAILLQLIKIEGRNDREIAASKLAGIHISQ-VKDGFVE-- 120
Query: 126 DMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
DM F+ GDIVRA V++ + L+T DLGVV A
Sbjct: 121 DMGKEFKVGDIVRARVIA-DEKSPIQLTTKGQDLGVVFA 158
>gi|297526176|ref|YP_003668200.1| RNA-binding protein [Staphylothermus hellenicus DSM 12710]
gi|297255092|gb|ADI31301.1| RNA-binding protein (consists of S1 domain and a Zn-ribbon
domain)-like protein [Staphylothermus hellenicus DSM
12710]
Length = 188
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
Query: 4 KEEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVE 63
K + +LV PG+VLG E G+G YV G + + L G R L D + V
Sbjct: 3 KIRQGILVLPGDVLGVEEEYFPGQGVYV-NGKGYLRSQLVG--RVLI---DIVKRTTNVR 56
Query: 64 VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVR-EKFSGIIRQQDVRATEI 122
K + VP+ G +V V+ V +A DI K R F+GI+ + I
Sbjct: 57 SVHGKPY--VPKVGDIVEGIVSSVSEDLAFIDIYATEEKPTRTTSFTGILHISQASSEYI 114
Query: 123 DKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAEST 167
+ M+ + R GDIVRA V++ + + L+T + LGV++A T
Sbjct: 115 ET--MYDAMRIGDIVRARVIN--NNHPFQLTTKEPGLGVIAAFCT 155
>gi|21227981|ref|NP_633903.1| RNA-binding protein [Methanosarcina mazei Go1]
gi|452210447|ref|YP_007490561.1| RNA-binding protein, containing S1 domain [Methanosarcina mazei
Tuc01]
gi|20906407|gb|AAM31575.1| putative RNA-binding protein [Methanosarcina mazei Go1]
gi|452100349|gb|AGF97289.1| RNA-binding protein, containing S1 domain [Methanosarcina mazei
Tuc01]
Length = 316
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 34/185 (18%)
Query: 2 VVKEEEMV---LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLL------RTLSPP 52
VV EE++ V PGE++G E K+G G V G +Y++ TG + R +S
Sbjct: 124 VVSEEDLEKGGFVLPGELVGTTEEFKSGNGTAVIA--GDIYSTATGNVLIDRKARVVSVK 181
Query: 53 PDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFS--- 109
P++ +T + + + G VV R++ V A ++ + K RE S
Sbjct: 182 PNT--------ITPN-----ILKVGDVVYGRISDVRESGAMVEVAGIEGKENREIVSVRT 228
Query: 110 GIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA--EST 167
G I VR + + + + FRP DIVRA V+ D L+TA++ LGVV A +
Sbjct: 229 GDIHVSSVRDSYVKR--LADEFRPSDIVRAKVV---DVERMRLTTAEDSLGVVKAYCSNC 283
Query: 168 AGKLV 172
G+LV
Sbjct: 284 KGELV 288
>gi|116753330|ref|YP_842448.1| exosome complex RNA-binding protein Csl4 [Methanosaeta thermophila
PT]
gi|116664781|gb|ABK13808.1| RNA binding S1 domain protein [Methanosaeta thermophila PT]
Length = 185
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 22/160 (13%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
LV PG+ +G A E G YV G +YAS TG++ P+ R V V
Sbjct: 5 LVLPGDRIGSAEEFVPGHDTYV--FGGNIYASTTGVVDI------DPESR-LVSVIPRSN 55
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE-----KFSGIIRQQDVRATEIDK 124
P E G +V+ V + + I+ + K E + I +V+++ +
Sbjct: 56 ALPRVENGDIVVGEVVDIKENLV---ILALAFKKGYESRPLPELDATIHISNVKSSYVKD 112
Query: 125 VDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
+ R DIVRA V+ DAR LST +D+GV+ A
Sbjct: 113 LKQMFGLR--DIVRAKVI---DARQMRLSTEPDDMGVIKA 147
>gi|401422619|ref|XP_003875797.1| putative Csl4p homologue [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322492036|emb|CBZ27311.1| putative Csl4p homologue [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 285
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 20/115 (17%)
Query: 74 PEPGSVVIARVTKVMTRMASADIMCV---------------GAKSVREKFSGIIRQQDVR 118
P PG V R+T++ A +I+ V G S F G++RQ+D+R
Sbjct: 131 PRPGDTVHLRITRLNRLFAFGEIIAVNWSWCSHRSIFSAAAGGGSNSGVFKGVLRQEDIR 190
Query: 119 ATEIDKVDM-----HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTA 168
+ K + L+F GD+V A V+S D Y LST GVV + TA
Sbjct: 191 PFKPTKDQLLPPPPSLAFGVGDVVLAEVISQSDVHQYQLSTTGEGCGVVESFITA 245
>gi|383320160|ref|YP_005381001.1| RNA-binding protein [Methanocella conradii HZ254]
gi|379321530|gb|AFD00483.1| putative RNA-binding protein [Methanocella conradii HZ254]
Length = 187
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 33/170 (19%)
Query: 7 EMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLL------RTLSPPP--DSPDQ 58
E V PG+++G + E GKG Y K N +YA TG + R++S P ++P
Sbjct: 3 EGEFVIPGDMIGTSEEFIPGKGTYEDKGN--IYAVTTGRVVYNKKERSVSVEPVTNTP-- 58
Query: 59 RPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE---KFSGIIRQQ 115
P P G +VI RVT + +A ++ + RE I
Sbjct: 59 -------------PTPREGDIVIGRVTDIKGSVALVELSRIKGHLDREIAGNTQAAIHIS 105
Query: 116 DVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAE 165
+V+ + + D+ F DIV+A V+ D + LST +LGV++++
Sbjct: 106 NVKDSYVQ--DLSREFGYQDIVKAKVI---DTKNMRLSTVDKNLGVLTSQ 150
>gi|154416753|ref|XP_001581398.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915625|gb|EAY20412.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 146
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
VP+ +VIARV + + ++ + ++ +R D++ ++D V +
Sbjct: 49 VPKIDDIVIARVIRAKRKELHLVLLSCNDEPLQSPLLAELRSVDIQEHDVDNVIASDFAK 108
Query: 133 PGDIVRASVLSLGDARAYF-LSTAKNDLGVVSAES 166
PGD+V+A V++LG + Y LSTAK+ LGVV E
Sbjct: 109 PGDLVKAQVVALGRSGFYAQLSTAKDGLGVVKIEE 143
>gi|14520270|ref|NP_125745.1| exosome complex RNA-binding protein Csl4 [Pyrococcus abyssi GE5]
gi|5457485|emb|CAB48976.1| RNA-binding protein, putative, containing S1 RNA binding domain
[Pyrococcus abyssi GE5]
gi|380740791|tpe|CCE69425.1| TPA: exosome complex RNA-binding protein Csl4 [Pyrococcus abyssi
GE5]
Length = 199
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
V PG+ LG E G+G V +G +Y++ G ++ + VE++ A
Sbjct: 16 FVLPGDYLGVIEEYLPGEGVIV--EDGNLYSARAGWVKI---------NKDKVEISLEPA 64
Query: 70 HG--PVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE----KFSGIIRQQDVRATEID 123
P+P+ G +V ARV V + ++ + + RE K +GI Q V+ ++
Sbjct: 65 SSVPPIPKKGDIVYARVIDVKQQAVLLRMIKIEGQENREIATSKLAGIHISQ-VKDGFVE 123
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
D+ F+ GDIVRA V++ + L+T DLGVV A
Sbjct: 124 --DLRNEFKIGDIVRARVIA-DEKSPIQLTTKDPDLGVVYA 161
>gi|148643417|ref|YP_001273930.1| exosome complex RNA-binding protein Csl4 [Methanobrevibacter
smithii ATCC 35061]
gi|222445659|ref|ZP_03608174.1| hypothetical protein METSMIALI_01300 [Methanobrevibacter smithii
DSM 2375]
gi|261349793|ref|ZP_05975210.1| conserved hypothetical protein [Methanobrevibacter smithii DSM
2374]
gi|148552434|gb|ABQ87562.1| predicted RNA-binding protein [Methanobrevibacter smithii ATCC
35061]
gi|222435224|gb|EEE42389.1| putative exosome complex RNA-binding protein Csl4
[Methanobrevibacter smithii DSM 2375]
gi|288860577|gb|EFC92875.1| conserved hypothetical protein [Methanobrevibacter smithii DSM
2374]
Length = 190
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 16/161 (9%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
V PG+ LG + GKG Y + NG + +S+ G ++ S + T+ V +
Sbjct: 8 FVMPGDKLGIIEQYLLGKGTY--EDNGEIKSSVLGNVQIDS-------KMRTITVKAKSS 58
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCV--GAKSVREKFSGIIRQQDVRATEIDKVDM 127
+ + G V ++T + T+ A+ +I C+ ++ + + G I ++ +DK +
Sbjct: 59 QPALLKLGDTVYGQITDIKTQRANVNIDCLTDSSRPLALPYMGAIHISQAKSGYLDK--L 116
Query: 128 HLSFRPGDIVRASVLSL-GDARAYFLSTAKNDLGVVSAEST 167
+FR GDIV+A V+ + GD L+T D GV+ A T
Sbjct: 117 TDAFRIGDIVKAKVVKITGD--NVDLATVDEDCGVLKAMCT 155
>gi|146087553|ref|XP_001465855.1| putative Csl4p homologue [Leishmania infantum JPCM5]
gi|398015770|ref|XP_003861074.1| Csl4p homologue, putative [Leishmania donovani]
gi|134069955|emb|CAM68285.1| putative Csl4p homologue [Leishmania infantum JPCM5]
gi|322499298|emb|CBZ34372.1| Csl4p homologue, putative [Leishmania donovani]
Length = 285
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 20/111 (18%)
Query: 74 PEPGSVVIARVTKVMTRMASADIMCV---------------GAKSVREKFSGIIRQQDVR 118
P PG V R+T++ A +I+ V G S F GI+RQ+D+R
Sbjct: 131 PRPGDTVHIRITRLNRLFAFGEILAVNWSWCSHRSFFSAAAGGGSNSGVFKGILRQEDIR 190
Query: 119 ATEIDKVDM-----HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
+ K + L+F GD+V A V+S DA LST GVV +
Sbjct: 191 PFKPTKDQLLPPPLSLAFGVGDVVLAEVISQSDAHQCQLSTTGEGCGVVES 241
>gi|341581754|ref|YP_004762246.1| exosome complex RNA-binding protein Csl4 [Thermococcus sp. 4557]
gi|340809412|gb|AEK72569.1| exosome complex RNA-binding protein Csl4 [Thermococcus sp. 4557]
Length = 196
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 78/168 (46%), Gaps = 34/168 (20%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG--------LLRTLSPPPDSPDQRPT 61
+V PG+ LG E G+G V + NG +YA G + ++ P D+P
Sbjct: 12 IVLPGDYLGVIEEYFPGEG--VKEENGELYAVRAGKVVIDQDRMEISVEPVTDTP----- 64
Query: 62 VEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV-GAKSVRE----KFSGIIRQQD 116
P+P+ G VVIA V +V + A ++ + G + RE K +GI Q
Sbjct: 65 ----------PLPQVGDVVIANVIEVKPQAAIVQLIKIEGREDDREIATSKLAGIHISQ- 113
Query: 117 VRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
VR ++ M F+ GDIVRA V++ + LST DLGVV A
Sbjct: 114 VRDGYVE--GMSTEFKVGDIVRARVVAT-EKSPIQLSTKGPDLGVVYA 158
>gi|409095585|ref|ZP_11215609.1| exosome complex RNA-binding protein Csl4 [Thermococcus zilligii
AN1]
Length = 195
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 33/167 (19%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRT--------LSPPPDSPDQRPT 61
LV PG+ LG E G+G V + NG + A+ G +R + P D+P
Sbjct: 12 LVLPGDHLGVIEEYLPGEG--VKEENGELIATRAGRVRIDQEKMEIYVEPVTDTP----- 64
Query: 62 VEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE----KFSGIIRQQDV 117
P+P+ G +V+A+V V +++ + +S RE K +GI +
Sbjct: 65 ----------PLPKVGDIVLAQVIDVKPPAVIVNLLRIEGESRREIATSKMAGI-HVSSI 113
Query: 118 RATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
+ ++ D+ F+ GDIVRA V+S + L+T DLGVV A
Sbjct: 114 KNGFVE--DLSSEFKIGDIVRARVIS-NEKSPIQLTTIDPDLGVVYA 157
>gi|123403851|ref|XP_001302318.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121883595|gb|EAX89388.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 139
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 73 VPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFR 132
+P+ +VIARV + + ++ + ++ +R D++ ++D V +
Sbjct: 42 IPKIDDIVIARVIRAKRKELHLVLLSCNDEPLQSPLLAELRSVDIQEHDVDNVIASDFAK 101
Query: 133 PGDIVRASVLSLGDARAYF---LSTAKNDLGVVSAES 166
PGD+V+A V++LG R+ F LSTAK+ LGVV E
Sbjct: 102 PGDLVKAQVVALG--RSGFLAQLSTAKDGLGVVKIEE 136
>gi|452076993|gb|AGF92965.1| exosome complex RNA-binding protein Csl4 [uncultured organism]
Length = 193
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 20/159 (12%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+V PG+ LG + E G+G Y + +G+VY++L G L+ D + VE A
Sbjct: 8 VVYPGDELGTSEEWLPGEGTY--EEDGIVYSALFGKLKY-----DEENLEAKVE-----A 55
Query: 70 HGPVPE--PGSVVIARVTKVMTRMASADIMCVGAKS--VREKFSGIIRQQDVRATEIDKV 125
P+ E G VV +VT + S +I + KS + G I R ++
Sbjct: 56 INPITELKEGVVVYGKVTNRKESLVSLNIEVLEGKSRDIARDIEGSIHIS--RVSDDYTE 113
Query: 126 DMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
DM + GDIVRA V+ + + L+T LGVV A
Sbjct: 114 DMESQYLVGDIVRAKVVRI--EPSIRLTTVGKSLGVVRA 150
>gi|340053582|emb|CCC47875.1| putative exosome component CSL4 [Trypanosoma vivax Y486]
Length = 263
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 74 PEPGSVVIARVTKVMTRMASADIM------CVGAKSVREKFSGIIRQQDVRATEIDKVDM 127
P G V RV +V A +I+ C + F G+IR +D+R + + +
Sbjct: 117 PRMGDNVHLRVLRVSRYFAYGEIIAVNGCWCSSSAVCTSPFRGVIRVEDIRPFKPGRDKL 176
Query: 128 -----HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
+F+ GD+V A+VLS D R Y LST D GV+ +
Sbjct: 177 TPPPPSAAFQSGDVVIATVLSQSDVRQYQLSTLSEDCGVIES 218
>gi|417211410|ref|ZP_12021709.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli JB1-95]
gi|386194984|gb|EIH89220.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli JB1-95]
Length = 599
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SVV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVVTGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|14589998|ref|NP_142062.1| exosome complex RNA-binding protein Csl4 [Pyrococcus horikoshii
OT3]
gi|3256428|dbj|BAA29111.1| 200aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 200
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
V PG+ LG E G G V +G +Y++ G +R + +E++ A
Sbjct: 16 FVLPGDYLGVIEEYLPGDG--VIAEDGNLYSTRAGWVRI---------NKDKIEISLEPA 64
Query: 70 HG--PVPEPGSVVIARVTKVMTRMASADIMCV-GAKSVRE----KFSGIIRQQDVRATEI 122
PVP+ G +V ARV +V + ++ + G + RE K +GI Q V+ +
Sbjct: 65 SKVPPVPKKGDIVYARVLEVKQQAVLLKMIKIEGQEGNREIATSKLAGIHISQ-VKDGFV 123
Query: 123 DKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
+ D+ F+ GDIVRA V++ + L+T DLGVV A
Sbjct: 124 E--DLRNEFKVGDIVRARVIA-DEKSPIQLTTKDPDLGVVYA 162
>gi|419204704|ref|ZP_13747880.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC8B]
gi|378046852|gb|EHW09225.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC8B]
Length = 539
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SVV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 142 VDALKSRAPVAAPSQSVVTGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 201
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 202 DLGDSGLRYQPGD 214
>gi|390960480|ref|YP_006424314.1| hypothetical protein containing nucleic acid -binding domain
[Thermococcus sp. CL1]
gi|390518788|gb|AFL94520.1| hypothetical protein containing nucleic acid -binding domain
[Thermococcus sp. CL1]
Length = 196
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 34/168 (20%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG--------LLRTLSPPPDSPDQRPT 61
LV PG+ LG E G+G V + NG +YA G + ++ P D+P
Sbjct: 12 LVLPGDYLGVIEEYFPGEG--VKEENGELYAVRAGKVVIDQDRMEISIEPVTDTP----- 64
Query: 62 VEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV-GAKSVRE----KFSGIIRQQD 116
P+P+ G +VIA V +V + A ++ + G RE K +GI Q
Sbjct: 65 ----------PLPKVGDIVIANVIEVKPQAAIVQLVKIEGRDDDREIATSKLAGIHISQ- 113
Query: 117 VRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
VR ++ M F+ GD+VRA V++ + LST DLGVV A
Sbjct: 114 VRDGYVES--MTSEFKVGDVVRARVIAT-EKSPIQLSTKGPDLGVVYA 158
>gi|342180938|emb|CCC90415.1| exosome component CSL4 [Trypanosoma congolense IL3000]
Length = 288
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 100 GAKSVREKFSGIIRQQDVRATEIDKVDM-----HLSFRPGDIVRASVLSLGDARAYFLST 154
G+ F GIIR +D+R + + + +F+ GD+V A+VLS D R Y LST
Sbjct: 175 GSVGTSSGFRGIIRMEDIRPXKPQRDQLTPPPPAAAFQDGDVVVATVLSQSDVRQYQLST 234
Query: 155 AKNDLGVVSA 164
GVV A
Sbjct: 235 VAEHCGVVEA 244
>gi|386620324|ref|YP_006139904.1| Sulfite reductase-NADPH-flavoprotein alpha-component [Escherichia
coli NA114]
gi|387830606|ref|YP_003350543.1| sulfite reductase beta subunit [Escherichia coli SE15]
gi|432423062|ref|ZP_19665604.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE178]
gi|432501201|ref|ZP_19742956.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE216]
gi|432559924|ref|ZP_19796591.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE49]
gi|432695528|ref|ZP_19930724.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE162]
gi|432706990|ref|ZP_19942070.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE6]
gi|432920755|ref|ZP_20124344.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE173]
gi|432928439|ref|ZP_20129559.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE175]
gi|432982088|ref|ZP_20170861.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE211]
gi|433097530|ref|ZP_20283711.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE139]
gi|433106974|ref|ZP_20292944.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE148]
gi|281179763|dbj|BAI56093.1| sulfite reductase beta subunit [Escherichia coli SE15]
gi|333970825|gb|AEG37630.1| Sulfite reductase-NADPH-flavoprotein alpha-component [Escherichia
coli NA114]
gi|430943335|gb|ELC63453.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE178]
gi|431027586|gb|ELD40648.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE216]
gi|431090125|gb|ELD95898.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE49]
gi|431232957|gb|ELF28559.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE162]
gi|431256935|gb|ELF49869.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE6]
gi|431440043|gb|ELH21373.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE173]
gi|431442426|gb|ELH23515.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE175]
gi|431490212|gb|ELH69829.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE211]
gi|431614507|gb|ELI83660.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE139]
gi|431625887|gb|ELI94444.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE148]
Length = 599
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSDLRYQPGD 274
>gi|82778134|ref|YP_404483.1| sulfite reductase subunit alpha [Shigella dysenteriae Sd197]
gi|309786147|ref|ZP_07680775.1| sulfite reductase flavoprotein, alpha-component [Shigella
dysenteriae 1617]
gi|123561765|sp|Q32CG3.1|CYSJ_SHIDS RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|81242282|gb|ABB62992.1| sulfite reductase (NADPH), flavoprotein beta subunit [Shigella
dysenteriae Sd197]
gi|308925892|gb|EFP71371.1| sulfite reductase flavoprotein, alpha-component [Shigella
dysenteriae 1617]
Length = 599
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSDLRYQPGD 274
>gi|336477757|ref|YP_004616898.1| RNA binding protein [Methanosalsum zhilinae DSM 4017]
gi|335931138|gb|AEH61679.1| RNA binding protein [Methanosalsum zhilinae DSM 4017]
Length = 214
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 11 VTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAH 70
V PG+ +G E +G+G Y G +YA+ TG + + D++ + V +
Sbjct: 34 VLPGDHIGITEEFASGEGTYSLA--GDIYANRTGKVHV-----NKKDRK--ISVVPITSV 84
Query: 71 GPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSG---IIRQQDVRATEIDKVDM 127
PV G +VI + V +A I + S RE S +I DV+ + + D+
Sbjct: 85 PPVINKGDIVIGEIVNVRDSVAIVSISSIKGSSEREFMSDDNFVIHISDVKDSYVK--DL 142
Query: 128 HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
F GD+V+A V+ D L+T+ + LGV+++
Sbjct: 143 SREFSLGDVVKAKVI---DTEKMRLTTSDDSLGVMTS 176
>gi|420381710|ref|ZP_14881150.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
dysenteriae 225-75]
gi|391299217|gb|EIQ57181.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
dysenteriae 225-75]
Length = 587
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLSDSGLRYQPGD 262
>gi|73669146|ref|YP_305161.1| RNA-binding protein [Methanosarcina barkeri str. Fusaro]
gi|72396308|gb|AAZ70581.1| putative RNA-binding protein [Methanosarcina barkeri str. Fusaro]
Length = 318
Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 48/189 (25%)
Query: 5 EEEMV---LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLL-------------RT 48
EEE+ V PGE++G E K G+G V+ G +Y++ TG + RT
Sbjct: 129 EEELEKGGFVLPGELVGTTEEFKPGEGTTVS--AGDIYSTATGTVIIDRKARVVSVRPRT 186
Query: 49 LSPPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKF 108
L+P + + G +V ++T V A ++ + K RE
Sbjct: 187 LTP--------------------NILKVGDIVYGKITDVRESGAMVEVAGIEGKEDREIV 226
Query: 109 S---GIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA- 164
+ G I +VR + + + + FR DIVRA VL D L+TA++ LGVV A
Sbjct: 227 NVRLGDIHVSNVRDSYVKR--LSDEFRHFDIVRARVL---DTERMRLTTAEDSLGVVKAY 281
Query: 165 -ESTAGKLV 172
+ G+LV
Sbjct: 282 CSNCKGELV 290
>gi|435852343|ref|YP_007313929.1| putative RNA-binding protein (consists of S1 domain and a Zn-ribbon
domain) [Methanomethylovorans hollandica DSM 15978]
gi|433662973|gb|AGB50399.1| putative RNA-binding protein (consists of S1 domain and a Zn-ribbon
domain) [Methanomethylovorans hollandica DSM 15978]
Length = 242
Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 5 EEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRP-TVE 63
E E+V V PG+++G E G G ++ + ++A+ TG+++ D++ +
Sbjct: 56 EGELVFVMPGDIIGTTEEFIPGIGTFLNVAD--IHAASTGIVKI--------DRKARMIS 105
Query: 64 VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE-KFSGI--IRQQDVRAT 120
V + P G +V+ +T + + +I + + RE + GI I +V+ +
Sbjct: 106 VVPSTKYPPSVNVGDIVVGSITSLRESVVLVEIAAIKDEGEREFQKVGIAAIHVSNVKDS 165
Query: 121 EIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAE 165
++D S GDI++A VL+ + R LSTA+ +LGV+ A+
Sbjct: 166 YCKRLDEEFSV--GDIIKAKVLNTENMR---LSTAEQELGVMKAQ 205
>gi|419274018|ref|ZP_13816309.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC10D]
gi|378114724|gb|EHW76275.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC10D]
Length = 454
Score = 43.5 bits (101), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|418945291|ref|ZP_13498169.1| sulfite reductase subunit alpha, partial [Escherichia coli O157:H43
str. T22]
gi|375319390|gb|EHS65559.1| sulfite reductase subunit alpha, partial [Escherichia coli O157:H43
str. T22]
Length = 475
Score = 43.5 bits (101), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|419030253|ref|ZP_13577409.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC2C]
gi|419035888|ref|ZP_13582971.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC2D]
gi|377875630|gb|EHU40239.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC2C]
gi|377878406|gb|EHU42993.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC2D]
Length = 568
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V ++ T S D V + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|422780317|ref|ZP_16833102.1| sulfite reductase flavoprotein [Escherichia coli TW10509]
gi|323978626|gb|EGB73708.1| sulfite reductase flavoprotein [Escherichia coli TW10509]
Length = 568
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V ++ T S D V + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|422970102|ref|ZP_16973895.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli TA124]
gi|371600480|gb|EHN89252.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli TA124]
Length = 568
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V ++ T S D V + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|432582161|ref|ZP_19818575.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE57]
gi|431122443|gb|ELE25312.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE57]
Length = 599
Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|312964976|ref|ZP_07779216.1| sulfite reductase flavoprotein, alpha-component [Escherichia coli
2362-75]
gi|417757015|ref|ZP_12405086.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC2B]
gi|419003335|ref|ZP_13550854.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC1B]
gi|419008893|ref|ZP_13556317.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC1C]
gi|419014680|ref|ZP_13562023.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC1D]
gi|419019705|ref|ZP_13567009.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC1E]
gi|419025097|ref|ZP_13572320.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC2A]
gi|419040939|ref|ZP_13587961.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC2E]
gi|312290532|gb|EFR18412.1| sulfite reductase flavoprotein, alpha-component [Escherichia coli
2362-75]
gi|377842248|gb|EHU07302.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC1C]
gi|377845827|gb|EHU10846.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC1B]
gi|377855362|gb|EHU20233.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC1D]
gi|377858865|gb|EHU23703.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC1E]
gi|377862455|gb|EHU27267.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC2A]
gi|377872393|gb|EHU37039.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC2B]
gi|377888041|gb|EHU52513.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC2E]
Length = 599
Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|420321762|ref|ZP_14823587.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri 2850-71]
gi|391247069|gb|EIQ06325.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri 2850-71]
Length = 599
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|215488077|ref|YP_002330508.1| sulfite reductase subunit alpha [Escherichia coli O127:H6 str.
E2348/69]
gi|215266149|emb|CAS10575.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
O127:H6 str. E2348/69]
Length = 599
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|432466905|ref|ZP_19708991.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE205]
gi|433073949|ref|ZP_20260597.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE129]
gi|433184424|ref|ZP_20368666.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE85]
gi|430992702|gb|ELD09071.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE205]
gi|431586560|gb|ELI57952.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE129]
gi|431704525|gb|ELJ69151.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE85]
Length = 599
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|157869902|ref|XP_001683502.1| putative Csl4p homologue [Leishmania major strain Friedlin]
gi|68126567|emb|CAJ05015.1| putative Csl4p homologue [Leishmania major strain Friedlin]
Length = 285
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 20/111 (18%)
Query: 74 PEPGSVVIARVTKVMTRMASADIMCV---------------GAKSVREKFSGIIRQQDVR 118
P PG V R+T++ A +I+ V G S F GI+RQ+D+R
Sbjct: 131 PRPGDTVHLRITRLNRLFAFGEIIAVNWSWCSHRSLFSAAAGGGSNSGVFKGILRQEDIR 190
Query: 119 ATEIDKVDM-----HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
+ K + L+F GD+V A V+S D LST GVV +
Sbjct: 191 PFKPTKDQLLPPPLSLAFGVGDVVLAEVISQSDVHQCQLSTTGEGCGVVES 241
>gi|417734666|ref|ZP_12383314.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri 2747-71]
gi|332755610|gb|EGJ85973.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri 2747-71]
Length = 599
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|332158210|ref|YP_004423489.1| exosome complex RNA-binding protein Csl4 [Pyrococcus sp. NA2]
gi|331033673|gb|AEC51485.1| exosome complex RNA-binding protein Csl4 [Pyrococcus sp. NA2]
Length = 198
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
V PGE LG E G G V +G +Y++ G +R + +E++ A
Sbjct: 16 FVLPGEYLGVMEEYLPGDGVIV--EDGNLYSTRAGWVRI---------DKDKIEISLEPA 64
Query: 70 HG--PVPEPGSVVIARVTKVMTRMASADIMCVGAKS---VREKFSGIIRQQDVRATEIDK 124
P+P+ G +V ARV V + ++ + +S +GI Q V+ ++
Sbjct: 65 SKVPPIPKKGDIVYARVLDVKQQAVLLKLIKIEGQSRGVATSTLAGIHISQ-VKDGFVE- 122
Query: 125 VDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
D+ F+ GDIVRA V++ + L+T DLGVV A
Sbjct: 123 -DLRNEFKIGDIVRARVIA-DEKSPIQLTTKDPDLGVVYA 160
>gi|222157448|ref|YP_002557587.1| Sulfite reductase [NadPH] flavoprotein alpha-component [Escherichia
coli LF82]
gi|387618028|ref|YP_006121050.1| sulfite reductase subunit alpha [Escherichia coli O83:H1 str. NRG
857C]
gi|222034453|emb|CAP77195.1| Sulfite reductase [NadPH] flavoprotein alpha-component [Escherichia
coli LF82]
gi|312947289|gb|ADR28116.1| sulfite reductase subunit alpha [Escherichia coli O83:H1 str. NRG
857C]
Length = 599
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|24114052|ref|NP_708562.1| sulfite reductase subunit alpha [Shigella flexneri 2a str. 301]
gi|30064113|ref|NP_838284.1| sulfite reductase subunit alpha [Shigella flexneri 2a str. 2457T]
gi|110806612|ref|YP_690132.1| sulfite reductase subunit alpha [Shigella flexneri 5 str. 8401]
gi|384544343|ref|YP_005728406.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Shigella
flexneri 2002017]
gi|417703753|ref|ZP_12352857.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri K-218]
gi|417724433|ref|ZP_12373233.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri K-304]
gi|417729662|ref|ZP_12378355.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri K-671]
gi|417739631|ref|ZP_12388206.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri 4343-70]
gi|420332591|ref|ZP_14834240.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri K-1770]
gi|420343107|ref|ZP_14844574.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri K-404]
gi|424839000|ref|ZP_18263637.1| sulfite reductase subunit alpha [Shigella flexneri 5a str. M90T]
gi|81724232|sp|Q83QD9.3|CYSJ_SHIFL RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|123047984|sp|Q0T1I8.1|CYSJ_SHIF8 RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|24053177|gb|AAN44269.1| sulfite reductase (NADPH), flavoprotein beta subunit [Shigella
flexneri 2a str. 301]
gi|30042369|gb|AAP18094.1| sulfite reductase (NADPH), flavoprotein beta subunit [Shigella
flexneri 2a str. 2457T]
gi|110616160|gb|ABF04827.1| sulfite reductase (NADPH), flavoprotein beta subunit [Shigella
flexneri 5 str. 8401]
gi|281602129|gb|ADA75113.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Shigella
flexneri 2002017]
gi|332753481|gb|EGJ83861.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri 4343-70]
gi|332753615|gb|EGJ83994.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri K-671]
gi|333000136|gb|EGK19719.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri K-218]
gi|333015364|gb|EGK34704.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri K-304]
gi|383468052|gb|EID63073.1| sulfite reductase subunit alpha [Shigella flexneri 5a str. M90T]
gi|391248669|gb|EIQ07907.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri K-1770]
gi|391264317|gb|EIQ23310.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri K-404]
Length = 599
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|418258024|ref|ZP_12881425.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri 6603-63]
gi|397895718|gb|EJL12143.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri 6603-63]
Length = 599
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|417280208|ref|ZP_12067508.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 3003]
gi|425279130|ref|ZP_18670363.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli ARS4.2123]
gi|386244537|gb|EII86267.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 3003]
gi|408200137|gb|EKI25325.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli ARS4.2123]
Length = 599
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|331648481|ref|ZP_08349569.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli M605]
gi|419701561|ref|ZP_14229160.1| sulfite reductase subunit alpha [Escherichia coli SCI-07]
gi|422383108|ref|ZP_16463260.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 57-2]
gi|432398676|ref|ZP_19641454.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE25]
gi|432724196|ref|ZP_19959112.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE17]
gi|432728778|ref|ZP_19963654.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE18]
gi|432733502|ref|ZP_19968328.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE45]
gi|432742462|ref|ZP_19977179.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE23]
gi|432760588|ref|ZP_19995079.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE46]
gi|432802944|ref|ZP_20036900.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE84]
gi|432991827|ref|ZP_20180490.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE217]
gi|433111963|ref|ZP_20297822.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE150]
gi|433121288|ref|ZP_20306954.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE157]
gi|324005723|gb|EGB74942.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 57-2]
gi|331042228|gb|EGI14370.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli M605]
gi|380347023|gb|EIA35312.1| sulfite reductase subunit alpha [Escherichia coli SCI-07]
gi|430914254|gb|ELC35357.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE25]
gi|431264450|gb|ELF56164.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE17]
gi|431272343|gb|ELF63450.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE18]
gi|431273268|gb|ELF64354.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE45]
gi|431282695|gb|ELF73574.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE23]
gi|431306828|gb|ELF95133.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE46]
gi|431347473|gb|ELG34361.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE84]
gi|431493969|gb|ELH73560.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE217]
gi|431626999|gb|ELI95411.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE150]
gi|431641121|gb|ELJ08865.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE157]
Length = 599
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|420348695|ref|ZP_14850077.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
boydii 965-58]
gi|391267736|gb|EIQ26667.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
boydii 965-58]
Length = 599
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|419924298|ref|ZP_14442191.1| sulfite reductase subunit alpha [Escherichia coli 541-15]
gi|388390537|gb|EIL52023.1| sulfite reductase subunit alpha [Escherichia coli 541-15]
Length = 599
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|419392868|ref|ZP_13933671.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC15A]
gi|419397848|ref|ZP_13938616.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC15B]
gi|419408419|ref|ZP_13949105.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC15D]
gi|419413926|ref|ZP_13954571.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC15E]
gi|378235836|gb|EHX95891.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC15A]
gi|378243969|gb|EHY03915.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC15B]
gi|378252980|gb|EHY12858.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC15D]
gi|378258382|gb|EHY18205.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC15E]
Length = 599
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|415857771|ref|ZP_11532383.1| sulfite reductase flavoprotein, alpha-component [Shigella flexneri
2a str. 2457T]
gi|417708824|ref|ZP_12357852.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri VA-6]
gi|313647824|gb|EFS12270.1| sulfite reductase flavoprotein, alpha-component [Shigella flexneri
2a str. 2457T]
gi|332999511|gb|EGK19096.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri VA-6]
Length = 587
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLGDSGLRYQPGD 262
>gi|387608401|ref|YP_006097257.1| sulfite reductase (NADPH) flavoprotein alpha subunit [Escherichia
coli 042]
gi|284922701|emb|CBG35789.1| sulfite reductase (NADPH) flavoprotein alpha subunit [Escherichia
coli 042]
Length = 599
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|218690884|ref|YP_002399096.1| sulfite reductase subunit alpha [Escherichia coli ED1a]
gi|218428448|emb|CAR09229.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
ED1a]
Length = 599
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|417713845|ref|ZP_12362808.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri K-272]
gi|417718535|ref|ZP_12367428.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri K-227]
gi|333001110|gb|EGK20680.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri K-272]
gi|333015385|gb|EGK34724.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri K-227]
Length = 599
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|331664323|ref|ZP_08365229.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TA143]
gi|331058254|gb|EGI30235.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TA143]
Length = 599
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|300815821|ref|ZP_07096045.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 107-1]
gi|331669506|ref|ZP_08370352.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TA271]
gi|415875604|ref|ZP_11542308.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 79-10]
gi|417221450|ref|ZP_12024890.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 96.154]
gi|417270272|ref|ZP_12057632.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 3.3884]
gi|417603425|ref|ZP_12253992.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_94C]
gi|418041368|ref|ZP_12679593.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli W26]
gi|419346439|ref|ZP_13887810.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC13A]
gi|419350901|ref|ZP_13892234.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC13B]
gi|419356305|ref|ZP_13897558.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC13C]
gi|419361376|ref|ZP_13902589.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC13D]
gi|419387390|ref|ZP_13928263.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC14D]
gi|419948411|ref|ZP_14464708.1| sulfite reductase subunit alpha [Escherichia coli CUMT8]
gi|432377943|ref|ZP_19620930.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE12]
gi|432482080|ref|ZP_19724033.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE210]
gi|432806921|ref|ZP_20040837.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE91]
gi|432810453|ref|ZP_20044331.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE101]
gi|432835699|ref|ZP_20069234.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE136]
gi|432935678|ref|ZP_20134981.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE184]
gi|432968814|ref|ZP_20157727.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE203]
gi|433194789|ref|ZP_20378771.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE90]
gi|300531750|gb|EFK52812.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 107-1]
gi|331063174|gb|EGI35087.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TA271]
gi|342929340|gb|EGU98062.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 79-10]
gi|345348947|gb|EGW81238.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_94C]
gi|378184386|gb|EHX45022.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC13A]
gi|378198488|gb|EHX58958.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC13B]
gi|378199178|gb|EHX59646.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC13C]
gi|378201579|gb|EHX62022.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC13D]
gi|378230121|gb|EHX90248.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC14D]
gi|383475704|gb|EID67658.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli W26]
gi|386201252|gb|EII00243.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 96.154]
gi|386229077|gb|EII56433.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 3.3884]
gi|388421426|gb|EIL81042.1| sulfite reductase subunit alpha [Escherichia coli CUMT8]
gi|430897405|gb|ELC19610.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE12]
gi|431005666|gb|ELD20685.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE210]
gi|431354079|gb|ELG40828.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE91]
gi|431360804|gb|ELG47403.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE101]
gi|431384229|gb|ELG68295.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE136]
gi|431451926|gb|ELH32381.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE184]
gi|431469301|gb|ELH49231.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE203]
gi|431714579|gb|ELJ78764.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE90]
Length = 599
Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|170680548|ref|YP_001744916.1| sulfite reductase subunit alpha [Escherichia coli SMS-3-5]
gi|170518266|gb|ACB16444.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli SMS-3-5]
Length = 599
Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|432617929|ref|ZP_19854039.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE75]
gi|431152821|gb|ELE53747.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE75]
Length = 599
Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|417609385|ref|ZP_12259885.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_DG131-3]
gi|345356596|gb|EGW88797.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_DG131-3]
Length = 590
Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 193 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 252
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 253 DLGDSGLRYQPGD 265
>gi|432948815|ref|ZP_20143738.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE196]
gi|433044291|ref|ZP_20231780.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE117]
gi|431455447|gb|ELH35802.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE196]
gi|431554821|gb|ELI28697.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE117]
Length = 599
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|432853882|ref|ZP_20082427.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE144]
gi|431398297|gb|ELG81717.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE144]
Length = 599
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|432393215|ref|ZP_19636044.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE21]
gi|430917478|gb|ELC38525.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE21]
Length = 599
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|420337907|ref|ZP_14839469.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri K-315]
gi|391259781|gb|EIQ18855.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri K-315]
Length = 587
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLGDSGLRYQPGD 262
>gi|218701248|ref|YP_002408877.1| sulfite reductase subunit alpha [Escherichia coli IAI39]
gi|386625475|ref|YP_006145203.1| sulfite reductase subunit alpha [Escherichia coli O7:K1 str. CE10]
gi|218371234|emb|CAR19065.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
IAI39]
gi|349739212|gb|AEQ13918.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
O7:K1 str. CE10]
Length = 599
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|218696363|ref|YP_002404030.1| sulfite reductase subunit alpha [Escherichia coli 55989]
gi|407470636|ref|YP_006782921.1| sulfite reductase subunit alpha [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407480703|ref|YP_006777852.1| sulfite reductase subunit alpha [Escherichia coli O104:H4 str.
2011C-3493]
gi|410481269|ref|YP_006768815.1| sulfite reductase subunit alpha [Escherichia coli O104:H4 str.
2009EL-2050]
gi|417806286|ref|ZP_12453231.1| sulfite reductase subunit alpha [Escherichia coli O104:H4 str.
LB226692]
gi|417834039|ref|ZP_12480486.1| sulfite reductase subunit alpha [Escherichia coli O104:H4 str.
01-09591]
gi|422988865|ref|ZP_16979638.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. C227-11]
gi|422995757|ref|ZP_16986521.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. C236-11]
gi|423000903|ref|ZP_16991657.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 09-7901]
gi|423004572|ref|ZP_16995318.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 04-8351]
gi|423011074|ref|ZP_17001808.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-3677]
gi|423020302|ref|ZP_17011011.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-4404]
gi|423025468|ref|ZP_17016165.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-4522]
gi|423031289|ref|ZP_17021976.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-4623]
gi|423039114|ref|ZP_17029788.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-4632 C1]
gi|423044234|ref|ZP_17034901.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-4632 C2]
gi|423045962|ref|ZP_17036622.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-4632 C3]
gi|423054501|ref|ZP_17043308.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-4632 C4]
gi|423061476|ref|ZP_17050272.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-4632 C5]
gi|429720331|ref|ZP_19255258.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-9450]
gi|429772231|ref|ZP_19304251.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-02030]
gi|429777178|ref|ZP_19309152.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-02033-1]
gi|429785903|ref|ZP_19317798.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-02092]
gi|429791793|ref|ZP_19323647.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-02093]
gi|429792641|ref|ZP_19324490.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-02281]
gi|429799217|ref|ZP_19331015.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-02318]
gi|429802834|ref|ZP_19334594.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-02913]
gi|429812630|ref|ZP_19344313.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-03439]
gi|429813178|ref|ZP_19344857.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-04080]
gi|429818385|ref|ZP_19350020.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-03943]
gi|429904737|ref|ZP_19370716.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-9990]
gi|429908873|ref|ZP_19374837.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-9941]
gi|429914747|ref|ZP_19380694.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-4984]
gi|429919777|ref|ZP_19385708.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-5604]
gi|429925597|ref|ZP_19391510.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-4986]
gi|429929533|ref|ZP_19395435.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-4987]
gi|429936072|ref|ZP_19401958.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-4988]
gi|429941752|ref|ZP_19407626.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-5603]
gi|429944433|ref|ZP_19410295.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-6006]
gi|429951991|ref|ZP_19417837.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec12-0465]
gi|429955340|ref|ZP_19421172.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec12-0466]
gi|432766110|ref|ZP_20000532.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE48]
gi|218353095|emb|CAU98920.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
55989]
gi|340733683|gb|EGR62814.1| sulfite reductase subunit alpha [Escherichia coli O104:H4 str.
01-09591]
gi|340739193|gb|EGR73429.1| sulfite reductase subunit alpha [Escherichia coli O104:H4 str.
LB226692]
gi|354862592|gb|EHF23030.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. C236-11]
gi|354867876|gb|EHF28298.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. C227-11]
gi|354868272|gb|EHF28690.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 04-8351]
gi|354873874|gb|EHF34251.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 09-7901]
gi|354880557|gb|EHF40893.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-3677]
gi|354888391|gb|EHF48650.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-4404]
gi|354892299|gb|EHF52508.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-4522]
gi|354893505|gb|EHF53708.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-4632 C1]
gi|354896308|gb|EHF56479.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-4623]
gi|354897685|gb|EHF57842.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-4632 C2]
gi|354911537|gb|EHF71541.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-4632 C5]
gi|354914661|gb|EHF74644.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-4632 C3]
gi|354916443|gb|EHF76415.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-4632 C4]
gi|406776431|gb|AFS55855.1| sulfite reductase subunit alpha [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407053000|gb|AFS73051.1| sulfite reductase subunit alpha [Escherichia coli O104:H4 str.
2011C-3493]
gi|407066671|gb|AFS87718.1| sulfite reductase subunit alpha [Escherichia coli O104:H4 str.
2009EL-2071]
gi|429347433|gb|EKY84206.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-02092]
gi|429358469|gb|EKY95138.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-02030]
gi|429360214|gb|EKY96873.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-02033-1]
gi|429360525|gb|EKY97183.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-02093]
gi|429363893|gb|EKZ00518.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-02318]
gi|429375938|gb|EKZ12470.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-02281]
gi|429377856|gb|EKZ14371.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-03439]
gi|429389501|gb|EKZ25921.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-02913]
gi|429393670|gb|EKZ30061.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-03943]
gi|429403339|gb|EKZ39623.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. 11-04080]
gi|429405826|gb|EKZ42090.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-9990]
gi|429408707|gb|EKZ44942.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-9450]
gi|429413143|gb|EKZ49332.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-4987]
gi|429415872|gb|EKZ52030.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-4984]
gi|429419553|gb|EKZ55688.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-4986]
gi|429431032|gb|EKZ67082.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-4988]
gi|429435068|gb|EKZ71088.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-5603]
gi|429437294|gb|EKZ73301.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-6006]
gi|429442411|gb|EKZ78368.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-5604]
gi|429446561|gb|EKZ82489.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec12-0465]
gi|429450173|gb|EKZ86069.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec11-9941]
gi|429456239|gb|EKZ92085.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O104:H4 str. Ec12-0466]
gi|431309120|gb|ELF97397.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE48]
Length = 599
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|432544371|ref|ZP_19781211.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE236]
gi|432549861|ref|ZP_19786626.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE237]
gi|432622964|ref|ZP_19858989.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE76]
gi|432816477|ref|ZP_20050239.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE115]
gi|431073306|gb|ELD80957.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE236]
gi|431079029|gb|ELD86008.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE237]
gi|431157895|gb|ELE58521.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE76]
gi|431363096|gb|ELG49669.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE115]
Length = 599
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|425301597|ref|ZP_18691482.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 07798]
gi|408212123|gb|EKI36656.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 07798]
Length = 587
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLGDSGLRYQPGD 262
>gi|423706923|ref|ZP_17681306.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli B799]
gi|385711056|gb|EIG48024.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli B799]
Length = 599
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V ++ T S D V + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|260869444|ref|YP_003235846.1| sulfite reductase subunit alpha [Escherichia coli O111:H- str.
11128]
gi|417200191|ref|ZP_12017428.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 4.0522]
gi|417593090|ref|ZP_12243783.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 2534-86]
gi|419886487|ref|ZP_14407127.1| sulfite reductase subunit alpha [Escherichia coli O111:H8 str.
CVM9570]
gi|419892926|ref|ZP_14412933.1| sulfite reductase subunit alpha [Escherichia coli O111:H8 str.
CVM9574]
gi|420092283|ref|ZP_14603997.1| sulfite reductase subunit alpha [Escherichia coli O111:H8 str.
CVM9602]
gi|420097764|ref|ZP_14609056.1| sulfite reductase subunit alpha [Escherichia coli O111:H8 str.
CVM9634]
gi|424773063|ref|ZP_18200144.1| sulfite reductase subunit alpha [Escherichia coli O111:H8 str.
CFSAN001632]
gi|257765800|dbj|BAI37295.1| sulfite reductase, alpha subunit [Escherichia coli O111:H- str.
11128]
gi|345335182|gb|EGW67621.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 2534-86]
gi|386187994|gb|EIH76807.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 4.0522]
gi|388365362|gb|EIL29156.1| sulfite reductase subunit alpha [Escherichia coli O111:H8 str.
CVM9570]
gi|388369087|gb|EIL32707.1| sulfite reductase subunit alpha [Escherichia coli O111:H8 str.
CVM9574]
gi|394380585|gb|EJE58327.1| sulfite reductase subunit alpha [Escherichia coli O111:H8 str.
CVM9602]
gi|394383459|gb|EJE61059.1| sulfite reductase subunit alpha [Escherichia coli O111:H8 str.
CVM9634]
gi|421937312|gb|EKT94929.1| sulfite reductase subunit alpha [Escherichia coli O111:H8 str.
CFSAN001632]
Length = 599
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|432490568|ref|ZP_19732434.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE213]
gi|432840593|ref|ZP_20074055.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE140]
gi|433204492|ref|ZP_20388251.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE95]
gi|431019181|gb|ELD32592.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE213]
gi|431387802|gb|ELG71620.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE140]
gi|431718645|gb|ELJ82716.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE95]
Length = 599
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|145680|gb|AAA23650.1| NADPH-sulfite reducatase flavoprotein component [Escherichia coli]
Length = 599
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|417690849|ref|ZP_12340068.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
boydii 5216-82]
gi|332087372|gb|EGI92500.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
boydii 5216-82]
Length = 599
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|422787717|ref|ZP_16840455.1| sulfite reductase flavoprotein [Escherichia coli H489]
gi|323960659|gb|EGB56284.1| sulfite reductase flavoprotein [Escherichia coli H489]
Length = 599
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|422776014|ref|ZP_16829669.1| sulfite reductase flavoprotein [Escherichia coli H120]
gi|323946440|gb|EGB42467.1| sulfite reductase flavoprotein [Escherichia coli H120]
Length = 599
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|433093115|ref|ZP_20279375.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE138]
gi|431609003|gb|ELI78337.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE138]
Length = 599
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|432956414|ref|ZP_20148113.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE197]
gi|431466318|gb|ELH46393.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE197]
Length = 599
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|432828381|ref|ZP_20062000.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE135]
gi|431384151|gb|ELG68272.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE135]
Length = 599
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|82545065|ref|YP_409012.1| sulfite reductase subunit alpha [Shigella boydii Sb227]
gi|417683421|ref|ZP_12332768.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
boydii 3594-74]
gi|420327130|ref|ZP_14828876.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri CCH060]
gi|420354063|ref|ZP_14855158.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
boydii 4444-74]
gi|421683771|ref|ZP_16123562.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri 1485-80]
gi|123558940|sp|Q31XM4.1|CYSJ_SHIBS RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|81246476|gb|ABB67184.1| sulfite reductase (NADPH), flavoprotein beta subunit [Shigella
boydii Sb227]
gi|332091949|gb|EGI97027.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
boydii 3594-74]
gi|391248434|gb|EIQ07675.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri CCH060]
gi|391276724|gb|EIQ35488.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
boydii 4444-74]
gi|404337651|gb|EJZ64102.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri 1485-80]
Length = 599
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|415839731|ref|ZP_11521473.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli RN587/1]
gi|323188825|gb|EFZ74110.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli RN587/1]
Length = 587
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLGDSGLRYQPGD 262
>gi|293412112|ref|ZP_06654835.1| sulfite reductase flavoprotein [Escherichia coli B354]
gi|291468883|gb|EFF11374.1| sulfite reductase flavoprotein [Escherichia coli B354]
Length = 599
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|218555312|ref|YP_002388225.1| sulfite reductase subunit alpha [Escherichia coli IAI1]
gi|300906714|ref|ZP_07124401.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 84-1]
gi|301304530|ref|ZP_07210640.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 124-1]
gi|415861982|ref|ZP_11535514.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 85-1]
gi|417133056|ref|ZP_11977841.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 5.0588]
gi|417166768|ref|ZP_12000124.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 99.0741]
gi|417237102|ref|ZP_12035069.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 9.0111]
gi|417640549|ref|ZP_12290687.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TX1999]
gi|419171460|ref|ZP_13715345.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC7A]
gi|419182095|ref|ZP_13725706.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC7C]
gi|419187545|ref|ZP_13731055.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC7D]
gi|419192837|ref|ZP_13736288.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC7E]
gi|420386853|ref|ZP_14886199.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EPECa12]
gi|427805923|ref|ZP_18972990.1| sulfite reductase (NADPH), flavoprotein beta subunit [Escherichia
coli chi7122]
gi|427810516|ref|ZP_18977581.1| sulfite reductase (NADPH), flavoprotein beta subunit [Escherichia
coli]
gi|433131282|ref|ZP_20316713.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE163]
gi|433135942|ref|ZP_20321280.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE166]
gi|443618795|ref|YP_007382651.1| sulfite reductase subunit alpha [Escherichia coli APEC O78]
gi|218362080|emb|CAQ99689.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
IAI1]
gi|300401519|gb|EFJ85057.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 84-1]
gi|300840134|gb|EFK67894.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 124-1]
gi|315256621|gb|EFU36589.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 85-1]
gi|345392332|gb|EGX22113.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TX1999]
gi|378014434|gb|EHV77339.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC7A]
gi|378022215|gb|EHV84902.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC7C]
gi|378027463|gb|EHV90092.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC7D]
gi|378037539|gb|EHW00066.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC7E]
gi|386150910|gb|EIH02199.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 5.0588]
gi|386171925|gb|EIH43964.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 99.0741]
gi|386214187|gb|EII24610.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 9.0111]
gi|391304164|gb|EIQ61982.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EPECa12]
gi|412964105|emb|CCK48031.1| sulfite reductase (NADPH), flavoprotein beta subunit [Escherichia
coli chi7122]
gi|412970695|emb|CCJ45345.1| sulfite reductase (NADPH), flavoprotein beta subunit [Escherichia
coli]
gi|431644645|gb|ELJ12299.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE163]
gi|431655184|gb|ELJ22224.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE166]
gi|443423303|gb|AGC88207.1| sulfite reductase subunit alpha [Escherichia coli APEC O78]
Length = 599
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|417866833|ref|ZP_12511873.1| hypothetical protein C22711_3761 [Escherichia coli O104:H4 str.
C227-11]
gi|341920122|gb|EGT69731.1| hypothetical protein C22711_3761 [Escherichia coli O104:H4 str.
C227-11]
Length = 587
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLGDSGLRYQPGD 262
>gi|414577524|ref|ZP_11434699.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
sonnei 3233-85]
gi|415846979|ref|ZP_11525755.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
sonnei 53G]
gi|323167212|gb|EFZ52929.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
sonnei 53G]
gi|391283057|gb|EIQ41680.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
sonnei 3233-85]
Length = 587
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLGDSGLRYQPGD 262
>gi|300820553|ref|ZP_07100704.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 119-7]
gi|331678748|ref|ZP_08379422.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli H591]
gi|300526817|gb|EFK47886.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 119-7]
gi|331073578|gb|EGI44899.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli H591]
Length = 599
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|300936428|ref|ZP_07151349.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 21-1]
gi|432681223|ref|ZP_19916593.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE143]
gi|300458428|gb|EFK21921.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 21-1]
gi|431219422|gb|ELF16833.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE143]
Length = 599
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|432637971|ref|ZP_19873838.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE81]
gi|431169386|gb|ELE69605.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE81]
Length = 599
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|422828134|ref|ZP_16876306.1| sulfite reductase flavoprotein alpha-component [Escherichia coli
B093]
gi|371615574|gb|EHO03973.1| sulfite reductase flavoprotein alpha-component [Escherichia coli
B093]
Length = 599
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|417630065|ref|ZP_12280301.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_MHI813]
gi|345371636|gb|EGX03605.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_MHI813]
Length = 587
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLGDSGLRYQPGD 262
>gi|415830200|ref|ZP_11516102.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli OK1357]
gi|417619344|ref|ZP_12269757.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli G58-1]
gi|419806757|ref|ZP_14331850.1| sulfite reductase (NADPH) flavoprotein, alpha chain [Escherichia
coli AI27]
gi|425423581|ref|ZP_18804744.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 0.1288]
gi|323183299|gb|EFZ68696.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli OK1357]
gi|345374657|gb|EGX06608.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli G58-1]
gi|384470246|gb|EIE54364.1| sulfite reductase (NADPH) flavoprotein, alpha chain [Escherichia
coli AI27]
gi|408342444|gb|EKJ56871.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 0.1288]
Length = 587
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLGDSGLRYQPGD 262
>gi|415818445|ref|ZP_11508167.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli OK1180]
gi|419198344|ref|ZP_13741671.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC8A]
gi|323180191|gb|EFZ65743.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli OK1180]
gi|378045542|gb|EHW07936.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC8A]
Length = 587
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLGDSGLRYQPGD 262
>gi|415779131|ref|ZP_11489903.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 3431]
gi|417614216|ref|ZP_12264673.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_EH250]
gi|425116288|ref|ZP_18518079.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 8.0566]
gi|425121046|ref|ZP_18522733.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 8.0569]
gi|425273924|ref|ZP_18665329.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW15901]
gi|425284451|ref|ZP_18675483.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW00353]
gi|315615147|gb|EFU95784.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 3431]
gi|345361250|gb|EGW93411.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_EH250]
gi|408191984|gb|EKI17572.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW15901]
gi|408200640|gb|EKI25816.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW00353]
gi|408565816|gb|EKK41897.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 8.0566]
gi|408566808|gb|EKK42869.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 8.0569]
Length = 587
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLGDSGLRYQPGD 262
>gi|194431701|ref|ZP_03063992.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
dysenteriae 1012]
gi|417673832|ref|ZP_12323277.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
dysenteriae 155-74]
gi|194420057|gb|EDX36135.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
dysenteriae 1012]
gi|332087664|gb|EGI92791.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
dysenteriae 155-74]
Length = 587
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V ++ T S D V + SV +K +G ++DVR EID D
Sbjct: 194 KSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGHNSEKDVRHIEIDLGD 253
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 254 SGLRYQPGD 262
>gi|157158512|ref|YP_001464086.1| sulfite reductase subunit alpha [Escherichia coli E24377A]
gi|170018990|ref|YP_001723944.1| sulfite reductase subunit alpha [Escherichia coli ATCC 8739]
gi|209920211|ref|YP_002294295.1| sulfite reductase subunit alpha [Escherichia coli SE11]
gi|260856875|ref|YP_003230766.1| sulfite reductase subunit alpha [Escherichia coli O26:H11 str.
11368]
gi|293449090|ref|ZP_06663511.1| sulfite reductase flavoprotein [Escherichia coli B088]
gi|300950490|ref|ZP_07164401.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 116-1]
gi|300958075|ref|ZP_07170237.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 175-1]
gi|301020748|ref|ZP_07184815.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 196-1]
gi|307312807|ref|ZP_07592437.1| sulfite reductase (NADPH) flavoprotein, alpha chain [Escherichia
coli W]
gi|332280571|ref|ZP_08392984.1| sulfite reductase subunit alpha [Shigella sp. D9]
gi|378711810|ref|YP_005276703.1| sulfite reductase (NADPH) flavoprotein, alpha chain [Escherichia
coli KO11FL]
gi|386610129|ref|YP_006125615.1| sulfite reductase subunit alpha [Escherichia coli W]
gi|386700322|ref|YP_006164159.1| sulfite reductase subunit alpha [Escherichia coli KO11FL]
gi|386710621|ref|YP_006174342.1| sulfite reductase subunit alpha [Escherichia coli W]
gi|415786555|ref|ZP_11493633.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EPECa14]
gi|415811677|ref|ZP_11503990.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli LT-68]
gi|417123804|ref|ZP_11972714.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 97.0246]
gi|417150913|ref|ZP_11990652.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 1.2264]
gi|417156412|ref|ZP_11994036.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 96.0497]
gi|417291233|ref|ZP_12078514.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli B41]
gi|417296564|ref|ZP_12083811.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 900105 (10e)]
gi|417582251|ref|ZP_12233052.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_B2F1]
gi|417668154|ref|ZP_12317696.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_O31]
gi|419217023|ref|ZP_13760019.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC8D]
gi|419222766|ref|ZP_13765683.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC8E]
gi|419228177|ref|ZP_13771025.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC9A]
gi|419244690|ref|ZP_13787325.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC9D]
gi|419250495|ref|ZP_13793068.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC9E]
gi|419256296|ref|ZP_13798803.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC10A]
gi|419262593|ref|ZP_13805004.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC10B]
gi|419268945|ref|ZP_13811290.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC10C]
gi|419285446|ref|ZP_13827615.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC10F]
gi|419875060|ref|ZP_14396941.1| sulfite reductase subunit alpha [Escherichia coli O111:H11 str.
CVM9534]
gi|419885814|ref|ZP_14406478.1| sulfite reductase subunit alpha [Escherichia coli O111:H11 str.
CVM9545]
gi|419901666|ref|ZP_14420981.1| sulfite reductase subunit alpha [Escherichia coli O26:H11 str.
CVM9942]
gi|419910550|ref|ZP_14429066.1| sulfite reductase (NADPH) flavoprotein, alpha chain [Escherichia
coli O26:H11 str. CVM10026]
gi|419927174|ref|ZP_14444912.1| sulfite reductase subunit alpha [Escherichia coli 541-1]
gi|419939767|ref|ZP_14456552.1| sulfite reductase subunit alpha [Escherichia coli 75]
gi|420099337|ref|ZP_14610572.1| sulfite reductase subunit alpha [Escherichia coli O111:H11 str.
CVM9455]
gi|420107509|ref|ZP_14617842.1| sulfite reductase subunit alpha [Escherichia coli O111:H11 str.
CVM9553]
gi|420115184|ref|ZP_14624761.1| sulfite reductase subunit alpha [Escherichia coli O26:H11 str.
CVM10021]
gi|420123323|ref|ZP_14632215.1| sulfite reductase subunit alpha [Escherichia coli O26:H11 str.
CVM10030]
gi|420128813|ref|ZP_14637361.1| sulfite reductase subunit alpha [Escherichia coli O26:H11 str.
CVM10224]
gi|420134959|ref|ZP_14643056.1| sulfite reductase subunit alpha [Escherichia coli O26:H11 str.
CVM9952]
gi|422355777|ref|ZP_16436484.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 117-3]
gi|422760221|ref|ZP_16813981.1| sulfite reductase flavoprotein [Escherichia coli E1167]
gi|422771371|ref|ZP_16825061.1| sulfite reductase flavoprotein [Escherichia coli E482]
gi|423703899|ref|ZP_17678324.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli H730]
gi|424754093|ref|ZP_18182013.1| sulfite reductase subunit alpha [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424763274|ref|ZP_18190752.1| sulfite reductase subunit alpha [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425380948|ref|ZP_18764957.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1865]
gi|432565023|ref|ZP_19801597.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE51]
gi|432738215|ref|ZP_19972970.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE42]
gi|433049146|ref|ZP_20236489.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE120]
gi|442594280|ref|ZP_21012197.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
gi|189082748|sp|B1IU77.1|CYSJ_ECOLC RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|189082893|sp|A7ZQK7.1|CYSJ_ECO24 RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|157080542|gb|ABV20250.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli E24377A]
gi|169753918|gb|ACA76617.1| sulfite reductase (NADPH) flavoprotein, alpha chain [Escherichia
coli ATCC 8739]
gi|209913470|dbj|BAG78544.1| sulfite reductase beta subunit [Escherichia coli SE11]
gi|257755524|dbj|BAI27026.1| sulfite reductase, alpha subunit [Escherichia coli O26:H11 str.
11368]
gi|291322180|gb|EFE61609.1| sulfite reductase flavoprotein [Escherichia coli B088]
gi|299881769|gb|EFI89980.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 196-1]
gi|300315228|gb|EFJ65012.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 175-1]
gi|300450186|gb|EFK13806.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 116-1]
gi|306907242|gb|EFN37748.1| sulfite reductase (NADPH) flavoprotein, alpha chain [Escherichia
coli W]
gi|315062046|gb|ADT76373.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli W]
gi|323154992|gb|EFZ41184.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EPECa14]
gi|323172936|gb|EFZ58567.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli LT-68]
gi|323377371|gb|ADX49639.1| sulfite reductase (NADPH) flavoprotein, alpha chain [Escherichia
coli KO11FL]
gi|323941404|gb|EGB37587.1| sulfite reductase flavoprotein [Escherichia coli E482]
gi|324016277|gb|EGB85496.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 117-3]
gi|324119805|gb|EGC13684.1| sulfite reductase flavoprotein [Escherichia coli E1167]
gi|332102923|gb|EGJ06269.1| sulfite reductase subunit alpha [Shigella sp. D9]
gi|345335708|gb|EGW68145.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_B2F1]
gi|378059612|gb|EHW21811.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC8D]
gi|378064211|gb|EHW26372.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC8E]
gi|378072154|gb|EHW34217.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC9A]
gi|378088652|gb|EHW50502.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC9D]
gi|378092912|gb|EHW54731.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC9E]
gi|378098983|gb|EHW60708.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC10A]
gi|378104555|gb|EHW66213.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC10B]
gi|378109451|gb|EHW71062.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC10C]
gi|378129476|gb|EHW90847.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC10F]
gi|383391849|gb|AFH16807.1| sulfite reductase subunit alpha [Escherichia coli KO11FL]
gi|383406313|gb|AFH12556.1| sulfite reductase subunit alpha [Escherichia coli W]
gi|385707015|gb|EIG44047.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli H730]
gi|386147195|gb|EIG93640.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 97.0246]
gi|386160407|gb|EIH22218.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 1.2264]
gi|386165162|gb|EIH31682.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 96.0497]
gi|386253555|gb|EIJ03245.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli B41]
gi|386260008|gb|EIJ15482.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 900105 (10e)]
gi|388347826|gb|EIL13475.1| sulfite reductase subunit alpha [Escherichia coli O111:H11 str.
CVM9545]
gi|388349638|gb|EIL15106.1| sulfite reductase subunit alpha [Escherichia coli O111:H11 str.
CVM9534]
gi|388371326|gb|EIL34807.1| sulfite reductase (NADPH) flavoprotein, alpha chain [Escherichia
coli O26:H11 str. CVM10026]
gi|388375380|gb|EIL38398.1| sulfite reductase subunit alpha [Escherichia coli O26:H11 str.
CVM9942]
gi|388406491|gb|EIL66894.1| sulfite reductase subunit alpha [Escherichia coli 75]
gi|388408012|gb|EIL68372.1| sulfite reductase subunit alpha [Escherichia coli 541-1]
gi|394384542|gb|EJE62101.1| sulfite reductase subunit alpha [Escherichia coli O26:H11 str.
CVM10224]
gi|394407316|gb|EJE82178.1| sulfite reductase subunit alpha [Escherichia coli O26:H11 str.
CVM10021]
gi|394412429|gb|EJE86561.1| sulfite reductase subunit alpha [Escherichia coli O111:H11 str.
CVM9553]
gi|394417159|gb|EJE90909.1| sulfite reductase subunit alpha [Escherichia coli O26:H11 str.
CVM10030]
gi|394420741|gb|EJE94251.1| sulfite reductase subunit alpha [Escherichia coli O26:H11 str.
CVM9952]
gi|394423259|gb|EJE96523.1| sulfite reductase subunit alpha [Escherichia coli O111:H11 str.
CVM9455]
gi|397784120|gb|EJK94976.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_O31]
gi|408295152|gb|EKJ13489.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1865]
gi|421934008|gb|EKT91786.1| sulfite reductase subunit alpha [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421940003|gb|EKT97483.1| sulfite reductase subunit alpha [Escherichia coli O111:H11 str.
CFSAN001630]
gi|431091650|gb|ELD97360.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE51]
gi|431281059|gb|ELF71967.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE42]
gi|431563458|gb|ELI36670.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE120]
gi|441605789|emb|CCP97477.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
Length = 599
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|432793918|ref|ZP_20028000.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE78]
gi|432795419|ref|ZP_20029479.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE79]
gi|431337988|gb|ELG25075.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE78]
gi|431350485|gb|ELG37296.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE79]
Length = 599
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V ++ T S D V + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|432719873|ref|ZP_19954839.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE9]
gi|431261376|gb|ELF53415.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE9]
Length = 599
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|74313334|ref|YP_311753.1| sulfite reductase subunit alpha [Shigella sonnei Ss046]
gi|383179920|ref|YP_005457925.1| sulfite reductase subunit alpha [Shigella sonnei 53G]
gi|418267930|ref|ZP_12886856.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
sonnei str. Moseley]
gi|420360066|ref|ZP_14861029.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
sonnei 3226-85]
gi|123616318|sp|Q3YY94.1|CYSJ_SHISS RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|73856811|gb|AAZ89518.1| sulfite reductase (NADPH), flavoprotein beta subunit [Shigella
sonnei Ss046]
gi|391280314|gb|EIQ38988.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
sonnei 3226-85]
gi|397897832|gb|EJL14232.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
sonnei str. Moseley]
Length = 599
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|419920107|ref|ZP_14438237.1| sulfite reductase subunit alpha [Escherichia coli KD2]
gi|388385665|gb|EIL47338.1| sulfite reductase subunit alpha [Escherichia coli KD2]
Length = 599
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|419234049|ref|ZP_13776821.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC9B]
gi|419239172|ref|ZP_13781883.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC9C]
gi|378075856|gb|EHW37870.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC9B]
gi|378082366|gb|EHW44311.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC9C]
Length = 599
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|331684385|ref|ZP_08384977.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli H299]
gi|450191872|ref|ZP_21891420.1| sulfite reductase (NADPH) flavoprotein alpha subunit [Escherichia
coli SEPT362]
gi|331078000|gb|EGI49206.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli H299]
gi|449319119|gb|EMD09175.1| sulfite reductase (NADPH) flavoprotein alpha subunit [Escherichia
coli SEPT362]
Length = 599
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVTAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|331654244|ref|ZP_08355244.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli M718]
gi|331047626|gb|EGI19703.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli M718]
Length = 599
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|301027211|ref|ZP_07190574.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 69-1]
gi|300395133|gb|EFJ78671.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 69-1]
Length = 599
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|218706260|ref|YP_002413779.1| sulfite reductase subunit alpha [Escherichia coli UMN026]
gi|298381993|ref|ZP_06991590.1| cysJ [Escherichia coli FVEC1302]
gi|300900978|ref|ZP_07119104.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 198-1]
gi|419934545|ref|ZP_14451653.1| sulfite reductase subunit alpha [Escherichia coli 576-1]
gi|432354671|ref|ZP_19597940.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE2]
gi|432403021|ref|ZP_19645770.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE26]
gi|432427291|ref|ZP_19669783.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE181]
gi|432461752|ref|ZP_19703895.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE204]
gi|432476981|ref|ZP_19718974.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE208]
gi|432518849|ref|ZP_19756032.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE228]
gi|432539019|ref|ZP_19775917.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE235]
gi|432632519|ref|ZP_19868441.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE80]
gi|432642229|ref|ZP_19878058.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE83]
gi|432667223|ref|ZP_19902800.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE116]
gi|432775808|ref|ZP_20010074.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE54]
gi|432887854|ref|ZP_20101782.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE158]
gi|432914019|ref|ZP_20119604.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE190]
gi|433019836|ref|ZP_20208016.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE105]
gi|433054400|ref|ZP_20241569.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE122]
gi|433069046|ref|ZP_20255826.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE128]
gi|433159783|ref|ZP_20344614.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE177]
gi|433179587|ref|ZP_20363978.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE82]
gi|218433357|emb|CAR14259.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
UMN026]
gi|298277133|gb|EFI18649.1| cysJ [Escherichia coli FVEC1302]
gi|300355549|gb|EFJ71419.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 198-1]
gi|388407948|gb|EIL68309.1| sulfite reductase subunit alpha [Escherichia coli 576-1]
gi|430873579|gb|ELB97145.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE2]
gi|430924485|gb|ELC45201.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE26]
gi|430954111|gb|ELC72996.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE181]
gi|430987935|gb|ELD04453.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE204]
gi|431003579|gb|ELD19061.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE208]
gi|431049764|gb|ELD59646.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE228]
gi|431068012|gb|ELD76518.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE235]
gi|431168602|gb|ELE68840.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE80]
gi|431180099|gb|ELE79988.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE83]
gi|431199363|gb|ELE98115.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE116]
gi|431316917|gb|ELG04713.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE54]
gi|431415332|gb|ELG97877.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE158]
gi|431437966|gb|ELH19472.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE190]
gi|431529448|gb|ELI06149.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE105]
gi|431568605|gb|ELI41577.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE122]
gi|431581484|gb|ELI53932.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE128]
gi|431676168|gb|ELJ42291.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE177]
gi|431699701|gb|ELJ64699.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE82]
Length = 599
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V ++ T S D V + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|188493977|ref|ZP_03001247.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 53638]
gi|194438992|ref|ZP_03071076.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 101-1]
gi|251786039|ref|YP_003000343.1| sulfite reductase, flavoprotein subunit, subunit of sulfite
reductase, flavoprotein subunit complex and sulfite
reductase [Escherichia coli BL21(DE3)]
gi|253772385|ref|YP_003035216.1| sulfite reductase subunit alpha [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162690|ref|YP_003045798.1| sulfite reductase subunit alpha [Escherichia coli B str. REL606]
gi|254289449|ref|YP_003055197.1| sulfite reductase subunit alpha [Escherichia coli BL21(DE3)]
gi|297518149|ref|ZP_06936535.1| sulfite reductase subunit alpha [Escherichia coli OP50]
gi|300931218|ref|ZP_07146560.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 187-1]
gi|301643335|ref|ZP_07243396.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 146-1]
gi|331643447|ref|ZP_08344578.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli H736]
gi|386281805|ref|ZP_10059464.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
sp. 4_1_40B]
gi|386615483|ref|YP_006135149.1| sulfite reductase (NADPH) flavoprotein, alpha-component
[Escherichia coli UMNK88]
gi|386706025|ref|YP_006169872.1| Sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli P12b]
gi|387613388|ref|YP_006116504.1| sulfite reductase (NADPH) flavoprotein alpha subunit [Escherichia
coli ETEC H10407]
gi|404376072|ref|ZP_10981248.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
sp. 1_1_43]
gi|417228936|ref|ZP_12030694.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 5.0959]
gi|417262311|ref|ZP_12049785.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 2.3916]
gi|417270961|ref|ZP_12058310.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 2.4168]
gi|417277235|ref|ZP_12064560.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 3.2303]
gi|417635779|ref|ZP_12285990.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_S1191]
gi|418304316|ref|ZP_12916110.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli UMNF18]
gi|419143688|ref|ZP_13688422.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC6A]
gi|419160486|ref|ZP_13704987.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC6D]
gi|419165542|ref|ZP_13709996.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC6E]
gi|419176299|ref|ZP_13720113.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC7B]
gi|419811330|ref|ZP_14336206.1| sulfite reductase subunit alpha [Escherichia coli O32:H37 str. P4]
gi|421775418|ref|ZP_16212027.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli AD30]
gi|422767725|ref|ZP_16821451.1| sulfite reductase flavoprotein [Escherichia coli E1520]
gi|422791935|ref|ZP_16844637.1| sulfite reductase flavoprotein [Escherichia coli TA007]
gi|422817878|ref|ZP_16866091.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli M919]
gi|425306497|ref|ZP_18696192.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli N1]
gi|432366247|ref|ZP_19609366.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE10]
gi|432418215|ref|ZP_19660811.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE44]
gi|432486519|ref|ZP_19728431.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE212]
gi|432576986|ref|ZP_19813440.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE56]
gi|432628389|ref|ZP_19864362.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE77]
gi|432661957|ref|ZP_19897595.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE111]
gi|432671837|ref|ZP_19907364.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE119]
gi|432686574|ref|ZP_19921867.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE156]
gi|432687963|ref|ZP_19923241.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE161]
gi|432705512|ref|ZP_19940610.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE171]
gi|432876635|ref|ZP_20094538.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE154]
gi|433174642|ref|ZP_20359158.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE232]
gi|442599197|ref|ZP_21016926.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
gi|188489176|gb|EDU64279.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 53638]
gi|194422113|gb|EDX38116.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 101-1]
gi|226839437|gb|EEH71458.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
sp. 1_1_43]
gi|242378312|emb|CAQ33089.1| sulfite reductase, flavoprotein subunit, subunit of sulfite
reductase, flavoprotein subunit complex and sulfite
reductase [Escherichia coli BL21(DE3)]
gi|253323429|gb|ACT28031.1| sulfite reductase (NADPH) flavoprotein, alpha chain [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|253974591|gb|ACT40262.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli B
str. REL606]
gi|253978756|gb|ACT44426.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
BL21(DE3)]
gi|300460951|gb|EFK24444.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 187-1]
gi|301078273|gb|EFK93079.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 146-1]
gi|309703124|emb|CBJ02457.1| sulfite reductase (NADPH) flavoprotein alpha subunit [Escherichia
coli ETEC H10407]
gi|323935760|gb|EGB32069.1| sulfite reductase flavoprotein [Escherichia coli E1520]
gi|323971573|gb|EGB66805.1| sulfite reductase flavoprotein [Escherichia coli TA007]
gi|331036918|gb|EGI09142.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli H736]
gi|332344652|gb|AEE57986.1| sulfite reductase (NADPH) flavoprotein, alpha-component
[Escherichia coli UMNK88]
gi|339416414|gb|AEJ58086.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli UMNF18]
gi|345386649|gb|EGX16482.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_S1191]
gi|377992703|gb|EHV55848.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC6A]
gi|378006106|gb|EHV69093.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC6D]
gi|378008471|gb|EHV71430.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC6E]
gi|378031505|gb|EHV94092.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC7B]
gi|383104193|gb|AFG41702.1| Sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli P12b]
gi|385155948|gb|EIF17948.1| sulfite reductase subunit alpha [Escherichia coli O32:H37 str. P4]
gi|385538391|gb|EIF85253.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli M919]
gi|386120996|gb|EIG69614.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
sp. 4_1_40B]
gi|386208271|gb|EII12776.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 5.0959]
gi|386223757|gb|EII46106.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 2.3916]
gi|386234661|gb|EII66637.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 2.4168]
gi|386240109|gb|EII77034.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 3.2303]
gi|408227290|gb|EKI50887.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli N1]
gi|408459304|gb|EKJ83086.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli AD30]
gi|430892518|gb|ELC15009.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE10]
gi|430937493|gb|ELC57747.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE44]
gi|431014937|gb|ELD28505.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE212]
gi|431113772|gb|ELE17421.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE56]
gi|431162166|gb|ELE62624.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE77]
gi|431198031|gb|ELE96856.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE111]
gi|431209516|gb|ELF07623.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE119]
gi|431220548|gb|ELF17881.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE156]
gi|431237799|gb|ELF32785.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE161]
gi|431242050|gb|ELF36477.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE171]
gi|431419307|gb|ELH01663.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE154]
gi|431690461|gb|ELJ55941.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE232]
gi|441652057|emb|CCQ02423.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
Length = 599
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|20089605|ref|NP_615680.1| hypothetical protein MA0720 [Methanosarcina acetivorans C2A]
gi|19914524|gb|AAM04160.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
C2A]
Length = 311
Score = 43.1 bits (100), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 33/170 (19%)
Query: 6 EEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLL------RTLSPPPD--SPD 57
E+ V PGE++G E K+G G V G +Y++ TG + R +S P+ +P+
Sbjct: 126 EKGGFVLPGELVGTTEEFKSGAGTTVI--GGDIYSTATGNVLIDRKSRVVSVKPNTLTPN 183
Query: 58 QRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFS---GIIRQ 114
+ + G +V ++T V A ++ + K RE + G I
Sbjct: 184 ---------------ILKVGDIVYGKITDVRESGAMVEVAGIEGKENREIVNTRPGDIHV 228
Query: 115 QDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
+VR + + + + FRP DIV+A V+ + R L+T+++ LGVV A
Sbjct: 229 SNVRDSYVKR--LSDEFRPSDIVKARVIDVDRMR---LTTSEDSLGVVKA 273
>gi|419155179|ref|ZP_13699738.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC6C]
gi|377995028|gb|EHV58148.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC6C]
Length = 587
Score = 43.1 bits (100), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLGDSGLRYQPGD 262
>gi|418998162|ref|ZP_13545752.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC1A]
gi|377842112|gb|EHU07167.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC1A]
Length = 539
Score = 43.1 bits (100), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 142 VDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 201
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 202 DLGDSGLRYQPGD 214
>gi|193069653|ref|ZP_03050605.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli E110019]
gi|432675858|ref|ZP_19911313.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE142]
gi|192957016|gb|EDV87467.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli E110019]
gi|431213033|gb|ELF10952.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE142]
Length = 599
Score = 43.1 bits (100), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|218547716|ref|YP_002381507.1| sulfite reductase subunit alpha [Escherichia fergusonii ATCC 35469]
gi|218355257|emb|CAQ87864.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia
fergusonii ATCC 35469]
Length = 599
Score = 43.1 bits (100), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V ++ T S D V + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|417140366|ref|ZP_11983616.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 97.0259]
gi|417309207|ref|ZP_12096046.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli PCN033]
gi|432870192|ref|ZP_20090649.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE147]
gi|338769187|gb|EGP23968.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli PCN033]
gi|386156489|gb|EIH12834.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 97.0259]
gi|431409162|gb|ELG92337.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE147]
Length = 599
Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V ++ T S D V + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|419403254|ref|ZP_13943974.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC15C]
gi|378245509|gb|EHY05446.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC15C]
Length = 539
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 142 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 201
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 202 DLGDSGLRYQPGD 214
>gi|417587778|ref|ZP_12238544.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_C165-02]
gi|345334113|gb|EGW66558.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_C165-02]
Length = 587
Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V ++ T S D V + SV +K +G ++DVR EID D
Sbjct: 194 KSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGD 253
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 254 SGLRYQPGD 262
>gi|419279274|ref|ZP_13821518.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC10E]
gi|419366484|ref|ZP_13907640.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC13E]
gi|419376733|ref|ZP_13917756.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC14B]
gi|419382047|ref|ZP_13922993.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC14C]
gi|378126553|gb|EHW87947.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC10E]
gi|378211475|gb|EHX71813.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC13E]
gi|378218280|gb|EHX78552.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC14B]
gi|378226543|gb|EHX86729.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC14C]
Length = 539
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 142 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 201
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 202 DLGDSGLRYQPGD 214
>gi|417744609|ref|ZP_12393133.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri 2930-71]
gi|332765711|gb|EGJ95924.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri 2930-71]
Length = 539
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 142 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 201
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 202 DLGDSGLRYQPGD 214
>gi|417829056|ref|ZP_12475604.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri J1713]
gi|335574355|gb|EGM60681.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
flexneri J1713]
Length = 539
Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 142 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 201
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 202 DLGDSGLRYQPGD 214
>gi|416899037|ref|ZP_11928519.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_7v]
gi|327251497|gb|EGE63183.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_7v]
Length = 589
Score = 42.7 bits (99), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 192 VDALKSRSPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 251
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 252 DLGDSGLRYQPGD 264
>gi|419211090|ref|ZP_13754163.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC8C]
gi|378051635|gb|EHW13951.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC8C]
Length = 539
Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 142 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 201
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 202 DLGDSGLRYQPGD 214
>gi|417119263|ref|ZP_11969628.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 1.2741]
gi|422800681|ref|ZP_16849178.1| sulfite reductase flavoprotein [Escherichia coli M863]
gi|323966740|gb|EGB62171.1| sulfite reductase flavoprotein [Escherichia coli M863]
gi|386137616|gb|EIG78778.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 1.2741]
Length = 601
Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 204 VDALKSRSPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 263
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 264 DLGDSGLRYQPGD 276
>gi|419149606|ref|ZP_13694258.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC6B]
gi|377991258|gb|EHV54409.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC6B]
Length = 539
Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 142 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 201
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 202 DLGDSGLRYQPGD 214
>gi|420364536|ref|ZP_14865412.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
sonnei 4822-66]
gi|391293178|gb|EIQ51467.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
sonnei 4822-66]
Length = 539
Score = 42.7 bits (99), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 142 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 201
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 202 DLGDSGLRYQPGD 214
>gi|293416010|ref|ZP_06658650.1| sulfite reductase flavoprotein [Escherichia coli B185]
gi|291432199|gb|EFF05181.1| sulfite reductase flavoprotein [Escherichia coli B185]
Length = 599
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDSPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|157162214|ref|YP_001459532.1| sulfite reductase subunit alpha [Escherichia coli HS]
gi|189082747|sp|A8A3P5.1|CYSJ_ECOHS RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|157067894|gb|ABV07149.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli HS]
Length = 599
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDSPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|425099392|ref|ZP_18502124.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 3.4870]
gi|425151565|ref|ZP_18551180.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 88.0221]
gi|429027908|ref|ZP_19093912.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 96.0427]
gi|429068634|ref|ZP_19132099.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0672]
gi|408548017|gb|EKK25402.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 3.4870]
gi|408595697|gb|EKK69925.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 88.0221]
gi|427278186|gb|EKW42676.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 96.0427]
gi|427318626|gb|EKW80489.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0672]
Length = 590
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 193 VDALKSRAPVAAPSQSVATGVVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 252
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 253 DLGDSGLRYQPGD 265
>gi|445030291|ref|ZP_21345964.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.1781]
gi|444640300|gb|ELW13582.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.1781]
Length = 599
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGVVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|432450897|ref|ZP_19693156.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE193]
gi|433034580|ref|ZP_20222284.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE112]
gi|430978631|gb|ELC95435.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE193]
gi|431548859|gb|ELI22951.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE112]
Length = 599
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGVVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|15803282|ref|NP_289314.1| sulfite reductase subunit alpha [Escherichia coli O157:H7 str.
EDL933]
gi|15832873|ref|NP_311646.1| sulfite reductase subunit alpha [Escherichia coli O157:H7 str.
Sakai]
gi|168749908|ref|ZP_02774930.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4113]
gi|168755512|ref|ZP_02780519.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4401]
gi|168762833|ref|ZP_02787840.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4501]
gi|168768859|ref|ZP_02793866.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4486]
gi|168774700|ref|ZP_02799707.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4196]
gi|168778750|ref|ZP_02803757.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4076]
gi|168788021|ref|ZP_02813028.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC869]
gi|168800154|ref|ZP_02825161.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC508]
gi|195939478|ref|ZP_03084860.1| sulfite reductase subunit alpha [Escherichia coli O157:H7 str.
EC4024]
gi|208807499|ref|ZP_03249836.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4206]
gi|208813753|ref|ZP_03255082.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4045]
gi|208820818|ref|ZP_03261138.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4042]
gi|209400763|ref|YP_002272228.1| sulfite reductase subunit alpha [Escherichia coli O157:H7 str.
EC4115]
gi|217327415|ref|ZP_03443498.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. TW14588]
gi|254794705|ref|YP_003079542.1| sulfite reductase subunit alpha [Escherichia coli O157:H7 str.
TW14359]
gi|261226060|ref|ZP_05940341.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
O157:H7 str. FRIK2000]
gi|261256684|ref|ZP_05949217.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
O157:H7 str. FRIK966]
gi|291284092|ref|YP_003500910.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O55:H7 str. CB9615]
gi|387508117|ref|YP_006160373.1| sulfite reductase subunit alpha [Escherichia coli O55:H7 str.
RM12579]
gi|387883944|ref|YP_006314246.1| sulfite reductase subunit alpha [Escherichia coli Xuzhou21]
gi|416776871|ref|ZP_11874905.1| sulfite reductase subunit alpha [Escherichia coli O157:H7 str.
G5101]
gi|416788297|ref|ZP_11879829.1| sulfite reductase subunit alpha [Escherichia coli O157:H- str.
493-89]
gi|416800262|ref|ZP_11884741.1| sulfite reductase subunit alpha [Escherichia coli O157:H- str. H
2687]
gi|416810836|ref|ZP_11889505.1| sulfite reductase subunit alpha [Escherichia coli O55:H7 str.
3256-97]
gi|416821542|ref|ZP_11894156.1| sulfite reductase subunit alpha [Escherichia coli O55:H7 str. USDA
5905]
gi|416831905|ref|ZP_11899252.1| sulfite reductase subunit alpha [Escherichia coli O157:H7 str.
LSU-61]
gi|419046972|ref|ZP_13593907.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC3A]
gi|419052486|ref|ZP_13599353.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC3B]
gi|419058477|ref|ZP_13605280.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC3C]
gi|419063971|ref|ZP_13610696.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC3D]
gi|419070920|ref|ZP_13616535.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC3E]
gi|419076925|ref|ZP_13622431.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC3F]
gi|419081945|ref|ZP_13627392.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC4A]
gi|419087781|ref|ZP_13633134.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC4B]
gi|419099500|ref|ZP_13644694.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC4D]
gi|419105294|ref|ZP_13650421.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC4E]
gi|419110758|ref|ZP_13655812.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC4F]
gi|419121817|ref|ZP_13666764.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC5B]
gi|419127340|ref|ZP_13672218.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC5C]
gi|419137901|ref|ZP_13682692.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC5E]
gi|420282073|ref|ZP_14784306.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW06591]
gi|420293765|ref|ZP_14795880.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW11039]
gi|420305632|ref|ZP_14807622.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW10119]
gi|420311232|ref|ZP_14813162.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1738]
gi|420317032|ref|ZP_14818905.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1734]
gi|421819571|ref|ZP_16255062.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 10.0821]
gi|421825578|ref|ZP_16260933.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FRIK920]
gi|421832275|ref|ZP_16267559.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA7]
gi|423726557|ref|ZP_17700564.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA31]
gi|424078862|ref|ZP_17815843.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FDA505]
gi|424148815|ref|ZP_17880191.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA15]
gi|424154639|ref|ZP_17885589.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA24]
gi|424252484|ref|ZP_17891150.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA25]
gi|424476562|ref|ZP_17925880.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA42]
gi|424501848|ref|ZP_17948745.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4203]
gi|424508098|ref|ZP_17954495.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4196]
gi|424582719|ref|ZP_18022366.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1863]
gi|425133159|ref|ZP_18534009.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 8.2524]
gi|425139745|ref|ZP_18540127.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 10.0833]
gi|425207529|ref|ZP_18603326.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FRIK2001]
gi|425219405|ref|ZP_18614371.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA23]
gi|425225955|ref|ZP_18620423.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA49]
gi|425232216|ref|ZP_18626257.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA45]
gi|425238136|ref|ZP_18631856.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TT12B]
gi|425250517|ref|ZP_18643459.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 5905]
gi|425262605|ref|ZP_18654612.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC96038]
gi|425268604|ref|ZP_18660235.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 5412]
gi|425296038|ref|ZP_18686234.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA38]
gi|425324806|ref|ZP_18713174.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1737]
gi|425355789|ref|ZP_18741857.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1850]
gi|425361750|ref|ZP_18747398.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1856]
gi|425367943|ref|ZP_18753093.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1862]
gi|425374276|ref|ZP_18758920.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1864]
gi|425393823|ref|ZP_18776932.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1868]
gi|425412434|ref|ZP_18794198.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli NE098]
gi|425418760|ref|ZP_18800031.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FRIK523]
gi|425430017|ref|ZP_18810629.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 0.1304]
gi|428954532|ref|ZP_19026330.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 88.1042]
gi|428960509|ref|ZP_19031814.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 89.0511]
gi|428967126|ref|ZP_19037845.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 90.0091]
gi|428985188|ref|ZP_19054584.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 93.0055]
gi|429051457|ref|ZP_19116025.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 97.0003]
gi|429056870|ref|ZP_19121184.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 97.1742]
gi|429074557|ref|ZP_19137810.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0678]
gi|429079793|ref|ZP_19142928.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0713]
gi|429827796|ref|ZP_19358838.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 96.0109]
gi|444932033|ref|ZP_21251071.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0814]
gi|444937463|ref|ZP_21256239.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0815]
gi|444943107|ref|ZP_21261623.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0816]
gi|444986869|ref|ZP_21303649.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA11]
gi|444992170|ref|ZP_21308812.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA19]
gi|445003049|ref|ZP_21319438.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA2]
gi|445008480|ref|ZP_21324719.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA47]
gi|445013585|ref|ZP_21329692.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA48]
gi|445046566|ref|ZP_21361816.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 3.4880]
gi|445057840|ref|ZP_21372698.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0670]
gi|452969415|ref|ZP_21967642.1| sulfite reductase subunit alpha [Escherichia coli O157:H7 str.
EC4009]
gi|81764936|sp|Q8X7U1.3|CYSJ_ECO57 RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|12517225|gb|AAG57872.1|AE005504_4 sulfite reductase (NADPH), flavoprotein beta subunit [Escherichia
coli O157:H7 str. EDL933]
gi|13363090|dbj|BAB37042.1| sulfite reductase (NADPH beta subunit [Escherichia coli O157:H7
str. Sakai]
gi|187769516|gb|EDU33360.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4196]
gi|188015772|gb|EDU53894.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4113]
gi|189003203|gb|EDU72189.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4076]
gi|189357364|gb|EDU75783.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4401]
gi|189362138|gb|EDU80557.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4486]
gi|189366886|gb|EDU85302.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4501]
gi|189372196|gb|EDU90612.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC869]
gi|189377485|gb|EDU95901.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC508]
gi|208727300|gb|EDZ76901.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4206]
gi|208735030|gb|EDZ83717.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4045]
gi|208740941|gb|EDZ88623.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4042]
gi|209162163|gb|ACI39596.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. EC4115]
gi|209761628|gb|ACI79126.1| sulfite reductase (NADPH beta subunit [Escherichia coli]
gi|209761630|gb|ACI79127.1| sulfite reductase (NADPH beta subunit [Escherichia coli]
gi|209761632|gb|ACI79128.1| sulfite reductase (NADPH beta subunit [Escherichia coli]
gi|209761634|gb|ACI79129.1| sulfite reductase (NADPH beta subunit [Escherichia coli]
gi|209761636|gb|ACI79130.1| sulfite reductase (NADPH beta subunit [Escherichia coli]
gi|217319782|gb|EEC28207.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli O157:H7 str. TW14588]
gi|254594105|gb|ACT73466.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
O157:H7 str. TW14359]
gi|290763965|gb|ADD57926.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli O55:H7 str. CB9615]
gi|320640410|gb|EFX09949.1| sulfite reductase subunit alpha [Escherichia coli O157:H7 str.
G5101]
gi|320645955|gb|EFX14936.1| sulfite reductase subunit alpha [Escherichia coli O157:H- str.
493-89]
gi|320651255|gb|EFX19690.1| sulfite reductase subunit alpha [Escherichia coli O157:H- str. H
2687]
gi|320656681|gb|EFX24574.1| sulfite reductase subunit alpha [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320662348|gb|EFX29745.1| sulfite reductase subunit alpha [Escherichia coli O55:H7 str. USDA
5905]
gi|320667400|gb|EFX34358.1| sulfite reductase subunit alpha [Escherichia coli O157:H7 str.
LSU-61]
gi|374360111|gb|AEZ41818.1| sulfite reductase subunit alpha [Escherichia coli O55:H7 str.
RM12579]
gi|377891333|gb|EHU55785.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC3B]
gi|377892575|gb|EHU57021.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC3A]
gi|377904071|gb|EHU68358.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC3C]
gi|377908955|gb|EHU73164.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC3D]
gi|377910377|gb|EHU74565.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC3E]
gi|377920145|gb|EHU84178.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC3F]
gi|377924916|gb|EHU88857.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC4A]
gi|377929055|gb|EHU92955.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC4B]
gi|377940221|gb|EHV03971.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC4D]
gi|377946474|gb|EHV10154.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC4E]
gi|377956327|gb|EHV19877.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC4F]
gi|377964974|gb|EHV28406.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC5B]
gi|377973059|gb|EHV36403.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC5C]
gi|377982321|gb|EHV45573.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC5E]
gi|386797402|gb|AFJ30436.1| sulfite reductase subunit alpha [Escherichia coli Xuzhou21]
gi|390642509|gb|EIN21904.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FDA505]
gi|390699657|gb|EIN74000.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA15]
gi|390720948|gb|EIN93649.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA25]
gi|390722754|gb|EIN95391.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA24]
gi|390740762|gb|EIO11880.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA31]
gi|390767577|gb|EIO36660.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA42]
gi|390780234|gb|EIO47934.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW06591]
gi|390795379|gb|EIO62663.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW11039]
gi|390814897|gb|EIO81446.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW10119]
gi|390824724|gb|EIO90681.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4203]
gi|390829946|gb|EIO95531.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4196]
gi|390899427|gb|EIP58675.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1738]
gi|390907289|gb|EIP66158.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1734]
gi|390917845|gb|EIP76261.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1863]
gi|408063760|gb|EKG98249.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA7]
gi|408065671|gb|EKH00141.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FRIK920]
gi|408120215|gb|EKH51239.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FRIK2001]
gi|408136562|gb|EKH66301.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA23]
gi|408139167|gb|EKH68801.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA49]
gi|408145292|gb|EKH74470.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA45]
gi|408153885|gb|EKH82255.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TT12B]
gi|408162746|gb|EKH90633.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 5905]
gi|408179189|gb|EKI05877.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC96038]
gi|408182038|gb|EKI08572.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 5412]
gi|408216448|gb|EKI40776.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA38]
gi|408241446|gb|EKI64093.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1737]
gi|408273016|gb|EKI93082.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1850]
gi|408276101|gb|EKI96034.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1856]
gi|408285183|gb|EKJ04233.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1862]
gi|408290050|gb|EKJ08787.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1864]
gi|408306617|gb|EKJ23983.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1868]
gi|408325463|gb|EKJ41338.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli NE098]
gi|408335627|gb|EKJ50465.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FRIK523]
gi|408345255|gb|EKJ59597.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 0.1304]
gi|408577813|gb|EKK53363.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 10.0833]
gi|408580562|gb|EKK55966.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 8.2524]
gi|408611566|gb|EKK84926.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 10.0821]
gi|427203279|gb|EKV73584.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 88.1042]
gi|427205461|gb|EKV75710.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 89.0511]
gi|427220097|gb|EKV89041.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 90.0091]
gi|427241026|gb|EKW08472.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 93.0055]
gi|427299728|gb|EKW62697.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 97.0003]
gi|427311333|gb|EKW73541.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 97.1742]
gi|427327031|gb|EKW88432.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0678]
gi|427328091|gb|EKW89459.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0713]
gi|429252809|gb|EKY37321.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 96.0109]
gi|444537300|gb|ELV17242.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0814]
gi|444547012|gb|ELV25667.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0815]
gi|444557332|gb|ELV34686.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0816]
gi|444592007|gb|ELV67268.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA11]
gi|444605996|gb|ELV80622.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA19]
gi|444614567|gb|ELV88793.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA2]
gi|444622223|gb|ELV96187.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA47]
gi|444623194|gb|ELV97129.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA48]
gi|444658872|gb|ELW31309.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 3.4880]
gi|444668995|gb|ELW40993.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0670]
Length = 599
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGVVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|422834300|ref|ZP_16882363.1| sulfite reductase flavoprotein alpha-component [Escherichia coli
E101]
gi|371602835|gb|EHN91523.1| sulfite reductase flavoprotein alpha-component [Escherichia coli
E101]
Length = 599
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGVVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|300921453|ref|ZP_07137809.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 115-1]
gi|432527554|ref|ZP_19764641.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE233]
gi|432535127|ref|ZP_19772095.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE234]
gi|300411628|gb|EFJ94938.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 115-1]
gi|431059209|gb|ELD68581.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE234]
gi|431062249|gb|ELD71526.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE233]
Length = 599
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDEPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|429016013|ref|ZP_19082906.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 95.0943]
gi|444959652|ref|ZP_21277504.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.1753]
gi|444964770|ref|ZP_21282370.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.1775]
gi|427260238|gb|EKW26229.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 95.0943]
gi|444572191|gb|ELV48637.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.1753]
gi|444575734|gb|ELV51963.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.1775]
Length = 587
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGVVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLGDSGLRYQPGD 262
>gi|312973021|ref|ZP_07787194.1| sulfite reductase flavoprotein, alpha-component [Escherichia coli
1827-70]
gi|310332963|gb|EFQ00177.1| sulfite reductase flavoprotein, alpha-component [Escherichia coli
1827-70]
Length = 587
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDEPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLGDSGLRYQPGD 262
>gi|425289893|ref|ZP_18680727.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 3006]
gi|408212398|gb|EKI36924.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 3006]
Length = 587
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDEPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLGDSGLRYQPGD 262
>gi|420271039|ref|ZP_14773393.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA22]
gi|420276769|ref|ZP_14779051.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA40]
gi|420288065|ref|ZP_14790249.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW10246]
gi|420299682|ref|ZP_14801728.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW09109]
gi|421813749|ref|ZP_16249461.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 8.0416]
gi|424085322|ref|ZP_17821818.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FDA517]
gi|424091737|ref|ZP_17827671.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FRIK1996]
gi|424098369|ref|ZP_17833672.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FRIK1985]
gi|424104601|ref|ZP_17839364.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FRIK1990]
gi|424111263|ref|ZP_17845499.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 93-001]
gi|424117199|ref|ZP_17851038.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA3]
gi|424123381|ref|ZP_17856703.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA5]
gi|424129539|ref|ZP_17862447.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA9]
gi|424135850|ref|ZP_17868313.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA10]
gi|424142399|ref|ZP_17874281.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA14]
gi|424330519|ref|ZP_17897056.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA28]
gi|424451078|ref|ZP_17902775.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA32]
gi|424457273|ref|ZP_17908405.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA33]
gi|424463720|ref|ZP_17914142.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA39]
gi|424470041|ref|ZP_17919864.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA41]
gi|424482321|ref|ZP_17931301.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW07945]
gi|424488487|ref|ZP_17937049.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW09098]
gi|424495079|ref|ZP_17942773.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW09195]
gi|424515428|ref|ZP_17960100.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW14313]
gi|424521642|ref|ZP_17965769.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW14301]
gi|424527529|ref|ZP_17971246.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4421]
gi|424533684|ref|ZP_17977033.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4422]
gi|424539740|ref|ZP_17982684.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4013]
gi|424545835|ref|ZP_17988234.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4402]
gi|424552075|ref|ZP_17993931.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4439]
gi|424558254|ref|ZP_17999671.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4436]
gi|424564598|ref|ZP_18005602.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4437]
gi|424570734|ref|ZP_18011289.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4448]
gi|424576890|ref|ZP_18016957.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1845]
gi|425105487|ref|ZP_18507806.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 5.2239]
gi|425111503|ref|ZP_18513424.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 6.0172]
gi|425127426|ref|ZP_18528595.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 8.0586]
gi|425145452|ref|ZP_18545450.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 10.0869]
gi|425157439|ref|ZP_18556703.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA34]
gi|425163790|ref|ZP_18562677.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FDA506]
gi|425169535|ref|ZP_18568009.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FDA507]
gi|425175599|ref|ZP_18573719.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FDA504]
gi|425181629|ref|ZP_18579325.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FRIK1999]
gi|425187896|ref|ZP_18585171.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FRIK1997]
gi|425194668|ref|ZP_18591437.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli NE1487]
gi|425201141|ref|ZP_18597350.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli NE037]
gi|425213283|ref|ZP_18608685.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA4]
gi|425244354|ref|ZP_18637660.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MA6]
gi|425256343|ref|ZP_18648862.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli CB7326]
gi|425312743|ref|ZP_18701926.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1735]
gi|425318731|ref|ZP_18707522.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1736]
gi|425331169|ref|ZP_18719022.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1846]
gi|425337349|ref|ZP_18724719.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1847]
gi|425343682|ref|ZP_18730573.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1848]
gi|425349488|ref|ZP_18735959.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1849]
gi|425387171|ref|ZP_18770730.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1866]
gi|425399958|ref|ZP_18782665.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1869]
gi|425406046|ref|ZP_18788269.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1870]
gi|428948449|ref|ZP_19020729.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 88.1467]
gi|428972827|ref|ZP_19043165.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 90.0039]
gi|428979252|ref|ZP_19049075.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 90.2281]
gi|428991246|ref|ZP_19060237.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 93.0056]
gi|428997119|ref|ZP_19065717.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 94.0618]
gi|429003376|ref|ZP_19071497.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 95.0183]
gi|429009458|ref|ZP_19076963.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 95.1288]
gi|429021964|ref|ZP_19088489.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 96.0428]
gi|429034097|ref|ZP_19099622.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 96.0939]
gi|429040174|ref|ZP_19105279.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 96.0932]
gi|429046007|ref|ZP_19110721.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 96.0107]
gi|429062353|ref|ZP_19126365.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 97.0007]
gi|429834162|ref|ZP_19364503.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 97.0010]
gi|444926334|ref|ZP_21245619.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 09BKT078844]
gi|444948550|ref|ZP_21266861.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0839]
gi|444954137|ref|ZP_21272229.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0848]
gi|444970790|ref|ZP_21288152.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.1793]
gi|444976073|ref|ZP_21293192.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.1805]
gi|444981468|ref|ZP_21298378.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli ATCC 700728]
gi|444997475|ref|ZP_21313972.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA13]
gi|445019487|ref|ZP_21335450.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA8]
gi|445024868|ref|ZP_21340690.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 7.1982]
gi|445035713|ref|ZP_21351243.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.1762]
gi|445041339|ref|ZP_21356711.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA35]
gi|445053856|ref|ZP_21368842.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 95.0083]
gi|390640255|gb|EIN19719.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FRIK1996]
gi|390642055|gb|EIN21477.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FDA517]
gi|390659181|gb|EIN36948.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 93-001]
gi|390660351|gb|EIN38060.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FRIK1985]
gi|390662631|gb|EIN40220.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FRIK1990]
gi|390676070|gb|EIN52185.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA3]
gi|390679592|gb|EIN55487.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA5]
gi|390683044|gb|EIN58781.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA9]
gi|390695185|gb|EIN69737.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA10]
gi|390700017|gb|EIN74353.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA14]
gi|390713375|gb|EIN86313.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA22]
gi|390726174|gb|EIN98646.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA28]
gi|390741360|gb|EIO12432.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA32]
gi|390744346|gb|EIO15248.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA33]
gi|390757117|gb|EIO26606.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA40]
gi|390766096|gb|EIO35239.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA41]
gi|390766694|gb|EIO35807.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA39]
gi|390788488|gb|EIO55954.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW07945]
gi|390788627|gb|EIO56092.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW10246]
gi|390803862|gb|EIO70850.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW09098]
gi|390806090|gb|EIO73012.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW09109]
gi|390828201|gb|EIO93878.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW09195]
gi|390844908|gb|EIP08598.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW14313]
gi|390845291|gb|EIP08965.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TW14301]
gi|390849717|gb|EIP13139.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4421]
gi|390860304|gb|EIP22626.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4422]
gi|390864378|gb|EIP26486.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4013]
gi|390869790|gb|EIP31418.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4402]
gi|390877424|gb|EIP38346.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4439]
gi|390882904|gb|EIP43386.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4436]
gi|390892144|gb|EIP51732.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4437]
gi|390894803|gb|EIP54297.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC4448]
gi|390919339|gb|EIP77693.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1845]
gi|408068867|gb|EKH03281.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA34]
gi|408078129|gb|EKH12302.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FDA506]
gi|408081513|gb|EKH15520.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FDA507]
gi|408090194|gb|EKH23471.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FDA504]
gi|408096624|gb|EKH29559.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FRIK1999]
gi|408103013|gb|EKH35398.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli FRIK1997]
gi|408107770|gb|EKH39840.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli NE1487]
gi|408114260|gb|EKH45822.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli NE037]
gi|408126400|gb|EKH56960.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA4]
gi|408158830|gb|EKH86933.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MA6]
gi|408172410|gb|EKH99483.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli CB7326]
gi|408225953|gb|EKI49613.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1735]
gi|408237269|gb|EKI60129.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1736]
gi|408245984|gb|EKI68332.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1846]
gi|408254467|gb|EKI75990.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1847]
gi|408258026|gb|EKI79314.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1848]
gi|408264835|gb|EKI85624.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1849]
gi|408306901|gb|EKJ24263.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1866]
gi|408317686|gb|EKJ33916.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1869]
gi|408323744|gb|EKJ39705.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EC1870]
gi|408548364|gb|EKK25748.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 5.2239]
gi|408549492|gb|EKK26852.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 6.0172]
gi|408567117|gb|EKK43177.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 8.0586]
gi|408590655|gb|EKK65129.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 10.0869]
gi|408600116|gb|EKK73975.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 8.0416]
gi|427207006|gb|EKV77184.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 88.1467]
gi|427223062|gb|EKV91821.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 90.2281]
gi|427227094|gb|EKV95674.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 90.0039]
gi|427240411|gb|EKW07864.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 93.0056]
gi|427244636|gb|EKW11949.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 94.0618]
gi|427259787|gb|EKW25819.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 95.0183]
gi|427263405|gb|EKW29164.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 95.1288]
gi|427275460|gb|EKW40075.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 96.0428]
gi|427282182|gb|EKW46455.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 96.0939]
gi|427290687|gb|EKW54145.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 96.0932]
gi|427297748|gb|EKW60772.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 96.0107]
gi|427314197|gb|EKW76259.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 97.0007]
gi|429254602|gb|EKY39013.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 97.0010]
gi|444538766|gb|ELV18612.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 09BKT078844]
gi|444556818|gb|ELV34209.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0839]
gi|444562420|gb|ELV39489.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.0848]
gi|444578587|gb|ELV54641.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.1793]
gi|444592307|gb|ELV67566.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli ATCC 700728]
gi|444594175|gb|ELV69372.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.1805]
gi|444605212|gb|ELV79854.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA13]
gi|444628686|gb|ELW02423.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA8]
gi|444637247|gb|ELW10621.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 7.1982]
gi|444643809|gb|ELW16935.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 99.1762]
gi|444653500|gb|ELW26221.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli PA35]
gi|444657059|gb|ELW29555.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 95.0083]
Length = 587
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGVVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLGDSGLRYQPGD 262
>gi|294496390|ref|YP_003542883.1| RNA-binding protein (consists of S1 domain and a Zn-ribbon domain)
[Methanohalophilus mahii DSM 5219]
gi|292667389|gb|ADE37238.1| RNA-binding protein (consists of S1 domain and a Zn-ribbon domain)
[Methanohalophilus mahii DSM 5219]
Length = 258
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 19/163 (11%)
Query: 5 EEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEV 64
EE+ VL PG+++G E +AG+G Y + N +Y++ TG + + S R T E+
Sbjct: 74 EEQFVL--PGDIVGTNEEYEAGEGTYTLRGN--IYSTRTGNV-EIDRKKRSVSVRATSEL 128
Query: 65 TGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE-KFSGI--IRQQDVRATE 121
PV + +V+ V V MA I + RE GI I +++
Sbjct: 129 P------PVIKKDDIVVGNVVNVRDSMALVQIAAIKGHGEREVNNPGIAAIHISNIKEDY 182
Query: 122 IDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
+ + L+ D+V+A V+ + R LS A +LGV+SA
Sbjct: 183 VKNIANELALM--DVVKAKVIDIDSMR---LSIAAKELGVMSA 220
>gi|71403610|ref|XP_804589.1| exosome component CSL4 [Trypanosoma cruzi strain CL Brener]
gi|70867637|gb|EAN82738.1| exosome component CSL4, putative [Trypanosoma cruzi]
Length = 256
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 14/105 (13%)
Query: 74 PEPGSVVIARVTKVMTRMASADIMCVG---------AKSVREKFSGIIRQQDVR-----A 119
P G V RV +V A +I+ V + + F G++R +D+R
Sbjct: 110 PRLGDTVYMRVVRVSRAFAYGEIIAVNGVWCSNSSVSVGLAGSFRGVVRVEDIRPFKPTK 169
Query: 120 TEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
++ +F GD+V A+VLS D R Y LST GVV A
Sbjct: 170 DQLTPPPPAAAFHAGDVVMATVLSQSDVRQYQLSTMHEHCGVVEA 214
>gi|422331756|ref|ZP_16412771.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli 4_1_47FAA]
gi|373247349|gb|EHP66795.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli 4_1_47FAA]
Length = 450
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V ++ T S D V + SV +K +G ++DVR EID D
Sbjct: 57 KSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGD 116
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 117 SGLRYQPGD 125
>gi|432771681|ref|ZP_20006002.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE50]
gi|432963102|ref|ZP_20152521.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE202]
gi|433064169|ref|ZP_20251083.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE125]
gi|431313562|gb|ELG01534.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE50]
gi|431471677|gb|ELH51569.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE202]
gi|431580056|gb|ELI52626.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE125]
Length = 599
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSCAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYKPGD 274
>gi|16130671|ref|NP_417244.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
str. K-12 substr. MG1655]
gi|170082338|ref|YP_001731658.1| sulfite reductase subunit alpha [Escherichia coli str. K-12 substr.
DH10B]
gi|238901901|ref|YP_002927697.1| sulfite reductase subunit alpha [Escherichia coli BW2952]
gi|386594496|ref|YP_006090896.1| sulfite reductase (NADPH) flavoprotein, alpha chain [Escherichia
coli DH1]
gi|387622447|ref|YP_006130075.1| sulfite reductase subunit alpha [Escherichia coli DH1]
gi|388478781|ref|YP_490973.1| sulfite reductase subunit alpha, flavoprotein [Escherichia coli
str. K-12 substr. W3110]
gi|417944141|ref|ZP_12587386.1| sulfite reductase subunit alpha [Escherichia coli XH140A]
gi|417975602|ref|ZP_12616400.1| sulfite reductase subunit alpha [Escherichia coli XH001]
gi|109940071|sp|P38038.4|CYSJ_ECOLI RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|882657|gb|AAA69274.1| sulfite reductase (NADPH) flavoprotein beta subunit [Escherichia
coli str. K-12 substr. MG1655]
gi|1789123|gb|AAC75806.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
str. K-12 substr. MG1655]
gi|85675585|dbj|BAE76841.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
str. K12 substr. W3110]
gi|169890173|gb|ACB03880.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
str. K-12 substr. DH10B]
gi|238863604|gb|ACR65602.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
BW2952]
gi|260448185|gb|ACX38607.1| sulfite reductase (NADPH) flavoprotein, alpha chain [Escherichia
coli DH1]
gi|315137371|dbj|BAJ44530.1| sulfite reductase subunit alpha [Escherichia coli DH1]
gi|342364275|gb|EGU28377.1| sulfite reductase subunit alpha [Escherichia coli XH140A]
gi|344194763|gb|EGV48835.1| sulfite reductase subunit alpha [Escherichia coli XH001]
gi|359333021|dbj|BAL39468.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
str. K-12 substr. MDS42]
Length = 599
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D + ++PGD
Sbjct: 262 DLGDSGMRYQPGD 274
>gi|418956865|ref|ZP_13508790.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
J53]
gi|384380659|gb|EIE38525.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
J53]
Length = 587
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D + ++PGD
Sbjct: 250 DLGDSGMRYQPGD 262
>gi|419093881|ref|ZP_13639163.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC4C]
gi|419116133|ref|ZP_13661148.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC5A]
gi|419132781|ref|ZP_13677615.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC5D]
gi|377940994|gb|EHV04740.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC4C]
gi|377959485|gb|EHV22981.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC5A]
gi|377974206|gb|EHV37534.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC5D]
Length = 539
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 142 VDALKSRAPVAAPSQSVATGVVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 201
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 202 DLGDSGLRYQPGD 214
>gi|450247541|ref|ZP_21901242.1| sulfite reductase subunit alpha [Escherichia coli S17]
gi|449318340|gb|EMD08414.1| sulfite reductase subunit alpha [Escherichia coli S17]
Length = 599
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D + ++PGD
Sbjct: 262 DLGDSGMRYQPGD 274
>gi|191166777|ref|ZP_03028603.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli B7A]
gi|190903148|gb|EDV62871.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli B7A]
Length = 599
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ + S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHSSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|432863872|ref|ZP_20087684.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE146]
gi|431403582|gb|ELG86859.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE146]
Length = 599
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V ++ T S D V + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNEIHTCPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|91773406|ref|YP_566098.1| RNA binding protein [Methanococcoides burtonii DSM 6242]
gi|91712421|gb|ABE52348.1| Archaeal exosome RNA binding protein CSL4 with
cold-sensitive-phenotype rescue activity
[Methanococcoides burtonii DSM 6242]
Length = 237
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 34/173 (19%)
Query: 3 VKEEE---MVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQR 59
V+EE+ VLV PG+++G E +AG Y + G +++ TG + ++R
Sbjct: 46 VEEEQHGDKVLVMPGDIIGTTEEFEAGANTYNVR--GDIHSLATGFVMV-------NNKR 96
Query: 60 PTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVR- 118
+ V + P + G ++I V V MA I E G++ +Q ++
Sbjct: 97 RMISVKPTTSMPPTIKKGDILIGTVVNVRDSMALVQI---------EGIKGVVDRQFIKP 147
Query: 119 ---ATEIDKV------DMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVV 162
A + V +M F D+V+A V++L + R ++T+ N+LGV+
Sbjct: 148 GIAAIHVSNVKESYVKEMSKEFAVADVVKAKVINLENMR---MTTSGNELGVM 197
>gi|415802747|ref|ZP_11500107.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli E128010]
gi|417598059|ref|ZP_12248693.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 3030-1]
gi|419318046|ref|ZP_13859847.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC12A]
gi|419330297|ref|ZP_13871897.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC12C]
gi|323159923|gb|EFZ45893.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli E128010]
gi|345351879|gb|EGW84131.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli 3030-1]
gi|378167843|gb|EHX28754.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC12A]
gi|378168772|gb|EHX29675.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC12C]
Length = 587
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ + S D V + SV +K +G ++DVR EI
Sbjct: 190 VDALKSRAPVAAPSQSVATGAVNEIHSSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 249
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 250 DLGDSGLRYQPGD 262
>gi|193065064|ref|ZP_03046139.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli E22]
gi|194427879|ref|ZP_03060425.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli B171]
gi|260845411|ref|YP_003223189.1| sulfite reductase, alpha subunit [Escherichia coli O103:H2 str.
12009]
gi|300925203|ref|ZP_07141106.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 182-1]
gi|301326191|ref|ZP_07219574.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 78-1]
gi|309795237|ref|ZP_07689656.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 145-7]
gi|417173944|ref|ZP_12003740.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 3.2608]
gi|417186211|ref|ZP_12011354.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 93.0624]
gi|417251118|ref|ZP_12042883.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 4.0967]
gi|417624748|ref|ZP_12275044.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_H.1.8]
gi|419290780|ref|ZP_13832869.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC11A]
gi|419296064|ref|ZP_13838107.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC11B]
gi|419301520|ref|ZP_13843517.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC11C]
gi|419307645|ref|ZP_13849543.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC11D]
gi|419312659|ref|ZP_13854519.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC11E]
gi|419324342|ref|ZP_13866032.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC12B]
gi|419371234|ref|ZP_13912347.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC14A]
gi|419862087|ref|ZP_14384704.1| sulfite reductase subunit alpha [Escherichia coli O103:H25 str.
CVM9340]
gi|419867606|ref|ZP_14389921.1| sulfite reductase subunit alpha [Escherichia coli O103:H2 str.
CVM9450]
gi|420392740|ref|ZP_14891988.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EPEC C342-62]
gi|422959517|ref|ZP_16971152.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli H494]
gi|450220883|ref|ZP_21896467.1| sulfite reductase subunit alpha [Escherichia coli O08]
gi|192927361|gb|EDV81980.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli E22]
gi|194414112|gb|EDX30388.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli B171]
gi|257760558|dbj|BAI32055.1| sulfite reductase, alpha subunit [Escherichia coli O103:H2 str.
12009]
gi|300418663|gb|EFK01974.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 182-1]
gi|300847036|gb|EFK74796.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 78-1]
gi|308121208|gb|EFO58470.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 145-7]
gi|345376193|gb|EGX08136.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli STEC_H.1.8]
gi|371595177|gb|EHN84029.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli H494]
gi|378128554|gb|EHW89936.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC11A]
gi|378140789|gb|EHX02012.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC11B]
gi|378147607|gb|EHX08754.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC11D]
gi|378149119|gb|EHX10246.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC11C]
gi|378156736|gb|EHX17782.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC11E]
gi|378163557|gb|EHX24509.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC12B]
gi|378215371|gb|EHX75668.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC14A]
gi|386176636|gb|EIH54115.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 3.2608]
gi|386182203|gb|EIH64961.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 93.0624]
gi|386217967|gb|EII34450.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli 4.0967]
gi|388346028|gb|EIL11771.1| sulfite reductase subunit alpha [Escherichia coli O103:H25 str.
CVM9340]
gi|388346679|gb|EIL12389.1| sulfite reductase subunit alpha [Escherichia coli O103:H2 str.
CVM9450]
gi|391311339|gb|EIQ68975.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli EPEC C342-62]
gi|449316245|gb|EMD06365.1| sulfite reductase subunit alpha [Escherichia coli O08]
Length = 599
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ + S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHSSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|419341189|ref|ZP_13882650.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC12E]
gi|378185738|gb|EHX46362.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC12E]
Length = 599
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ + S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHSSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|432751182|ref|ZP_19985781.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE29]
gi|431295100|gb|ELF85266.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE29]
Length = 599
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ + S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHSSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|419335832|ref|ZP_13877354.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC12D]
gi|378180708|gb|EHX41389.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli DEC12D]
Length = 599
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ + S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHSSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|432889998|ref|ZP_20103044.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE165]
gi|431432872|gb|ELH14548.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE165]
Length = 599
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLAASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|386600752|ref|YP_006102258.1| sulfite reductase [NADPH] flavoprotein subunit alpha [Escherichia
coli IHE3034]
gi|294491842|gb|ADE90598.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli IHE3034]
Length = 599
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLAASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|91212125|ref|YP_542111.1| sulfite reductase subunit alpha [Escherichia coli UTI89]
gi|110642898|ref|YP_670628.1| sulfite reductase subunit alpha [Escherichia coli 536]
gi|117624991|ref|YP_853979.1| sulfite reductase subunit alpha [Escherichia coli APEC O1]
gi|191171253|ref|ZP_03032803.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli F11]
gi|218559750|ref|YP_002392663.1| sulfite reductase subunit alpha [Escherichia coli S88]
gi|237706613|ref|ZP_04537094.1| sulfite reductase subunit alpha [Escherichia sp. 3_2_53FAA]
gi|300976249|ref|ZP_07173346.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 200-1]
gi|331658873|ref|ZP_08359815.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TA206]
gi|386603183|ref|YP_006109483.1| sulfite reductase subunit alpha [Escherichia coli UM146]
gi|417086202|ref|ZP_11953438.1| sulfite reductase subunit alpha [Escherichia coli cloneA_i1]
gi|419915968|ref|ZP_14434299.1| sulfite reductase subunit alpha [Escherichia coli KD1]
gi|419944661|ref|ZP_14461136.1| sulfite reductase subunit alpha [Escherichia coli HM605]
gi|422356907|ref|ZP_16437580.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 110-3]
gi|422369478|ref|ZP_16449878.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 16-3]
gi|422373119|ref|ZP_16453448.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 60-1]
gi|422750221|ref|ZP_16804132.1| sulfite reductase flavoprotein [Escherichia coli H252]
gi|422754474|ref|ZP_16808300.1| sulfite reductase flavoprotein [Escherichia coli H263]
gi|422840747|ref|ZP_16888717.1| sulfite reductase flavoprotein alpha-component [Escherichia coli
H397]
gi|432359076|ref|ZP_19602294.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE4]
gi|432363925|ref|ZP_19607083.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE5]
gi|432472058|ref|ZP_19714098.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE206]
gi|432574934|ref|ZP_19811409.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE55]
gi|432589061|ref|ZP_19825415.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE58]
gi|432598908|ref|ZP_19835179.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE62]
gi|432603410|ref|ZP_19839652.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE66]
gi|432714467|ref|ZP_19949500.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE8]
gi|432755612|ref|ZP_19990158.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE22]
gi|432779692|ref|ZP_20013914.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE59]
gi|432788684|ref|ZP_20022812.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE65]
gi|432822120|ref|ZP_20055810.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE118]
gi|432823630|ref|ZP_20057300.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE123]
gi|432899865|ref|ZP_20110375.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE192]
gi|433006212|ref|ZP_20194638.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE227]
gi|433008880|ref|ZP_20197294.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE229]
gi|433029648|ref|ZP_20217502.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE109]
gi|433078905|ref|ZP_20265429.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE131]
gi|433154830|ref|ZP_20339766.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE176]
gi|433164715|ref|ZP_20349448.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE179]
gi|433169702|ref|ZP_20354325.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE180]
gi|122422675|sp|Q1R7T4.1|CYSJ_ECOUT RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|123147774|sp|Q0TEA2.1|CYSJ_ECOL5 RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|150379996|sp|A1AEV0.1|CYSJ_ECOK1 RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|91073699|gb|ABE08580.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli UTI89]
gi|110344490|gb|ABG70727.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli 536]
gi|115514115|gb|ABJ02190.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli APEC O1]
gi|190908553|gb|EDV68142.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli F11]
gi|218366519|emb|CAR04272.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
S88]
gi|226899653|gb|EEH85912.1| sulfite reductase subunit alpha [Escherichia sp. 3_2_53FAA]
gi|300308594|gb|EFJ63114.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 200-1]
gi|307625667|gb|ADN69971.1| sulfite reductase subunit alpha [Escherichia coli UM146]
gi|315289239|gb|EFU48634.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 110-3]
gi|315298749|gb|EFU58003.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 16-3]
gi|323951021|gb|EGB46897.1| sulfite reductase flavoprotein [Escherichia coli H252]
gi|323957229|gb|EGB52953.1| sulfite reductase flavoprotein [Escherichia coli H263]
gi|324015502|gb|EGB84721.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 60-1]
gi|331053455|gb|EGI25484.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli TA206]
gi|355350727|gb|EHF99923.1| sulfite reductase subunit alpha [Escherichia coli cloneA_i1]
gi|371605758|gb|EHN94366.1| sulfite reductase flavoprotein alpha-component [Escherichia coli
H397]
gi|388382368|gb|EIL44223.1| sulfite reductase subunit alpha [Escherichia coli KD1]
gi|388418052|gb|EIL77874.1| sulfite reductase subunit alpha [Escherichia coli HM605]
gi|430875597|gb|ELB99132.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE4]
gi|430884381|gb|ELC07321.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE5]
gi|430996689|gb|ELD12964.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE206]
gi|431106464|gb|ELE10672.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE55]
gi|431119084|gb|ELE22099.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE58]
gi|431128778|gb|ELE30954.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE62]
gi|431139769|gb|ELE41547.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE66]
gi|431255046|gb|ELF48305.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE8]
gi|431300916|gb|ELF90463.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE22]
gi|431325607|gb|ELG12990.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE59]
gi|431335684|gb|ELG22813.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE65]
gi|431367189|gb|ELG53675.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE118]
gi|431378155|gb|ELG63146.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE123]
gi|431425005|gb|ELH07080.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE192]
gi|431512580|gb|ELH90671.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE227]
gi|431522619|gb|ELH99851.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE229]
gi|431542197|gb|ELI17436.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE109]
gi|431595303|gb|ELI65370.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE131]
gi|431672856|gb|ELJ39090.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE176]
gi|431685546|gb|ELJ51116.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE179]
gi|431685978|gb|ELJ51544.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE180]
Length = 599
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGTVNEIHTSPYSKDAPLAASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|156937370|ref|YP_001435166.1| RNA-binding protein [Ignicoccus hospitalis KIN4/I]
gi|156566354|gb|ABU81759.1| RNA-binding protein (consists of S1 domain and a Zn-ribbon
domain)-like protein [Ignicoccus hospitalis KIN4/I]
Length = 192
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 19/167 (11%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+V PG+ L E G G Y + +G+V AS+ G +R D+ + +EV G A
Sbjct: 9 VVAPGDPLCVIEEYAPGPGTY--EDDGIVRASIPGTVRI-----DTVNY--VIEVRGPSA 59
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDK-VD-M 127
V P VV V + +A + A+S E F + ++ K VD +
Sbjct: 60 EKKVLSPKEVVYGEVVSMRNELAQLKV----ARSFDEVFRARAFSAVLHISQAGKPVDSL 115
Query: 128 HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAE-STAGKLVY 173
+ RPGD+V+A VLS + Y LS LGV+ A S G +Y
Sbjct: 116 YDVVRPGDVVKAKVLS---SPPYQLSLKGPRLGVILAYCSNCGHPLY 159
>gi|71657529|ref|XP_817279.1| exosome component CSL4 [Trypanosoma cruzi strain CL Brener]
gi|70882459|gb|EAN95428.1| exosome component CSL4, putative [Trypanosoma cruzi]
Length = 256
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 14/105 (13%)
Query: 74 PEPGSVVIARVTKVMTRMASADIMCVG---------AKSVREKFSGIIRQQDVR-----A 119
P G V RV +V A +I+ V + + F G++R +D+R
Sbjct: 110 PRLGDTVHLRVVRVSRAFAYGEIIAVNGVWCSNSSVSVGLAGSFRGVVRVEDIRPFKPTK 169
Query: 120 TEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
++ +F GD+V A+VLS D R Y LST GVV A
Sbjct: 170 DQLTPPPPAAAFHAGDVVMATVLSQSDVRQYQLSTMHEHCGVVEA 214
>gi|432554795|ref|ZP_19791514.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE47]
gi|431082146|gb|ELD88460.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE47]
Length = 599
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLAASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|301049480|ref|ZP_07196438.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 185-1]
gi|300298711|gb|EFJ55096.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 185-1]
Length = 599
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLAASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|433199457|ref|ZP_20383349.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE94]
gi|431719579|gb|ELJ83633.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE94]
Length = 599
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLAASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|432382457|ref|ZP_19625397.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE15]
gi|430906198|gb|ELC27799.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE15]
Length = 599
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLAASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|26249162|ref|NP_755202.1| sulfite reductase subunit alpha [Escherichia coli CFT073]
gi|227888300|ref|ZP_04006105.1| sulfite reductase subunit alpha [Escherichia coli 83972]
gi|300976779|ref|ZP_07173596.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 45-1]
gi|306812361|ref|ZP_07446559.1| sulfite reductase subunit alpha [Escherichia coli NC101]
gi|386630498|ref|YP_006150218.1| sulfite reductase subunit alpha [Escherichia coli str. 'clone D
i2']
gi|386635418|ref|YP_006155137.1| sulfite reductase subunit alpha [Escherichia coli str. 'clone D
i14']
gi|386640243|ref|YP_006107041.1| sulfite reductase subunit alpha [Escherichia coli ABU 83972]
gi|417285112|ref|ZP_12072403.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli TW07793]
gi|422363540|ref|ZP_16444077.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 153-1]
gi|432388389|ref|ZP_19631271.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE16]
gi|432407804|ref|ZP_19650510.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE28]
gi|432412885|ref|ZP_19655545.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE39]
gi|432432960|ref|ZP_19675385.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE187]
gi|432437442|ref|ZP_19679829.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE188]
gi|432442184|ref|ZP_19684522.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE189]
gi|432447299|ref|ZP_19689597.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE191]
gi|432457783|ref|ZP_19699963.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE201]
gi|432496778|ref|ZP_19738573.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE214]
gi|432505522|ref|ZP_19747243.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE220]
gi|432515020|ref|ZP_19752241.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE224]
gi|432524916|ref|ZP_19762041.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE230]
gi|432569804|ref|ZP_19806313.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE53]
gi|432593937|ref|ZP_19830250.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE60]
gi|432608604|ref|ZP_19844787.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE67]
gi|432612738|ref|ZP_19848896.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE72]
gi|432647290|ref|ZP_19883076.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE86]
gi|432652245|ref|ZP_19887996.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE87]
gi|432656881|ref|ZP_19892582.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE93]
gi|432700149|ref|ZP_19935300.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE169]
gi|432746714|ref|ZP_19981377.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE43]
gi|432784635|ref|ZP_20018813.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE63]
gi|432845737|ref|ZP_20078471.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE141]
gi|432906114|ref|ZP_20114842.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE194]
gi|432939194|ref|ZP_20137344.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE183]
gi|432972874|ref|ZP_20161738.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE207]
gi|432974872|ref|ZP_20163707.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE209]
gi|432986477|ref|ZP_20175195.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE215]
gi|432996427|ref|ZP_20185011.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE218]
gi|433000998|ref|ZP_20189520.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE223]
gi|433014999|ref|ZP_20203338.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE104]
gi|433024582|ref|ZP_20212561.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE106]
gi|433039720|ref|ZP_20227316.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE113]
gi|433059206|ref|ZP_20246246.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE124]
gi|433083629|ref|ZP_20270083.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE133]
gi|433088405|ref|ZP_20274772.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE137]
gi|433102302|ref|ZP_20288379.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE145]
gi|433116610|ref|ZP_20302397.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE153]
gi|433126280|ref|ZP_20311833.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE160]
gi|433140348|ref|ZP_20325599.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE167]
gi|433145318|ref|ZP_20330457.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE168]
gi|433150267|ref|ZP_20335282.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE174]
gi|433189502|ref|ZP_20373595.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE88]
gi|433208844|ref|ZP_20392516.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE97]
gi|433213628|ref|ZP_20397216.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE99]
gi|433322415|ref|ZP_20399858.1| sulfite reductase subunit alpha [Escherichia coli J96]
gi|442603634|ref|ZP_21018505.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli Nissle 1917]
gi|81474953|sp|Q8FEI7.3|CYSJ_ECOL6 RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|26109569|gb|AAN81772.1|AE016765_174 Sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli CFT073]
gi|227834569|gb|EEJ45035.1| sulfite reductase subunit alpha [Escherichia coli 83972]
gi|300409965|gb|EFJ93503.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 45-1]
gi|305854399|gb|EFM54837.1| sulfite reductase subunit alpha [Escherichia coli NC101]
gi|307554735|gb|ADN47510.1| sulfite reductase, alpha subunit, flavoprotein [Escherichia coli
ABU 83972]
gi|315293681|gb|EFU53033.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia coli MS 153-1]
gi|355421397|gb|AER85594.1| sulfite reductase subunit alpha [Escherichia coli str. 'clone D
i2']
gi|355426317|gb|AER90513.1| sulfite reductase subunit alpha [Escherichia coli str. 'clone D
i14']
gi|386250353|gb|EII96520.1| sulfite reductase (NADPH) flavoprotein, alpha component
[Escherichia coli TW07793]
gi|430904971|gb|ELC26652.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE16]
gi|430928735|gb|ELC49281.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE28]
gi|430934345|gb|ELC54712.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE39]
gi|430951142|gb|ELC70362.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE187]
gi|430961615|gb|ELC79622.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE188]
gi|430965432|gb|ELC82853.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE189]
gi|430972145|gb|ELC89143.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE191]
gi|430981068|gb|ELC97808.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE201]
gi|431022471|gb|ELD35732.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE214]
gi|431037038|gb|ELD48026.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE220]
gi|431040395|gb|ELD50930.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE224]
gi|431050590|gb|ELD60335.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE230]
gi|431098896|gb|ELE04202.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE53]
gi|431126339|gb|ELE28686.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE60]
gi|431136683|gb|ELE38539.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE67]
gi|431146921|gb|ELE48344.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE72]
gi|431178637|gb|ELE78544.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE86]
gi|431189345|gb|ELE88768.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE87]
gi|431189684|gb|ELE89103.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE93]
gi|431242394|gb|ELF36814.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE169]
gi|431290654|gb|ELF81189.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE43]
gi|431327792|gb|ELG15112.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE63]
gi|431393913|gb|ELG77459.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE141]
gi|431430505|gb|ELH12336.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE194]
gi|431462189|gb|ELH42406.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE183]
gi|431480351|gb|ELH60071.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE207]
gi|431486938|gb|ELH66583.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE209]
gi|431498253|gb|ELH77466.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE215]
gi|431503971|gb|ELH82703.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE218]
gi|431507508|gb|ELH85793.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE223]
gi|431529316|gb|ELI06018.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE104]
gi|431533806|gb|ELI10299.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE106]
gi|431550118|gb|ELI24115.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE113]
gi|431567848|gb|ELI40840.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE124]
gi|431600385|gb|ELI70056.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE133]
gi|431603421|gb|ELI72846.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE137]
gi|431617881|gb|ELI86870.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE145]
gi|431632626|gb|ELJ00913.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE153]
gi|431643031|gb|ELJ10735.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE160]
gi|431658695|gb|ELJ25606.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE167]
gi|431660476|gb|ELJ27348.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE168]
gi|431669499|gb|ELJ35922.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE174]
gi|431704329|gb|ELJ68957.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE88]
gi|431729292|gb|ELJ92927.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE97]
gi|431733541|gb|ELJ96976.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE99]
gi|432348921|gb|ELL43363.1| sulfite reductase subunit alpha [Escherichia coli J96]
gi|441715679|emb|CCQ04482.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli Nissle 1917]
Length = 599
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ T S D + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLAASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|298675262|ref|YP_003727012.1| RNA-binding protein [Methanohalobium evestigatum Z-7303]
gi|298288250|gb|ADI74216.1| RNA binding protein [Methanohalobium evestigatum Z-7303]
Length = 199
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 17/164 (10%)
Query: 7 EMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTG 66
E V PG+ +G E G+G Y+ ++G +Y+ + G + D +V V
Sbjct: 15 ESNFVMPGDFVGTTEEYIPGEGTYM--YHGNIYSLVAGDVVV-------DDNSRSVSVIP 65
Query: 67 HKAHGPVPEPGSVVIARVTKVMTRMASADIMCV---GAKSVREKFSGIIRQQDVRATEID 123
+ P + G +VI +T V +A + + G + +E I +V+ +
Sbjct: 66 NTKTPPSIKEGDIVIGGITDVRDSVAIVGLEAIKDKGEREFQESRPAAIHVSNVKDAYVK 125
Query: 124 KVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAEST 167
K + F P DIV+ + S A+ LST+++ LGV+ A T
Sbjct: 126 K--LSDEFAPFDIVKGKIKS---AKNLSLSTSEDSLGVMKAYCT 164
>gi|366159757|ref|ZP_09459619.1| sulfite reductase subunit alpha [Escherichia sp. TW09308]
Length = 597
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V ++ T S + V + SV +K +G ++DVR EID D
Sbjct: 204 KSRAPVAAPSTSVATGAVNEIHTSPYSKEAPLVASLSVNQKITGRNSEKDVRHIEIDLGD 263
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 264 SGLRYQPGD 272
>gi|187732267|ref|YP_001881496.1| sulfite reductase subunit alpha [Shigella boydii CDC 3083-94]
gi|187429259|gb|ACD08533.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Shigella
boydii CDC 3083-94]
Length = 599
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV P SV V ++ S D V + SV +K +G ++DVR EI
Sbjct: 202 VDALKSRAPVAAPSQSVATGAVNEIHASPYSKDAPLVASLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|402216788|gb|EJT96871.1| exosome complex exonuclease rrp4 [Dacryopinax sp. DJM-731 SS1]
Length = 273
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 9 VLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHK 68
+L +PGEV+ A E G G +V +G V ASL+G + + ++ +V +
Sbjct: 1 MLTSPGEVITSAMEFMRGHGTFV--EDGSVVASLSGTIERV-------NKLVSVRALQTR 51
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMH 128
HG V G +V+ R+T+V D+ +R + R E D+++M
Sbjct: 52 YHGEV---GDLVVGRITEVQAARWKVDVNSHQDAILRLSSVNLPGGVQRRKLESDELEMR 108
Query: 129 LSFRPGDIVRASV 141
F GD++ A V
Sbjct: 109 KFFEEGDLLVAEV 121
>gi|407394188|gb|EKF26832.1| exosome component CSL4, putative [Trypanosoma cruzi marinkellei]
Length = 256
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 14/105 (13%)
Query: 74 PEPGSVVIARVTKVMTRMASADIMCVG---------AKSVREKFSGIIRQQDVRATEIDK 124
P G V RV +V A +I+ V + + F G++R +D+R + K
Sbjct: 110 PRLGDTVHMRVVRVSRAFAYGEIIAVNGVWCSNSSVSVGLAGSFRGVVRVEDIRPFKPTK 169
Query: 125 VDM-----HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
+ +F GD+V A+VLS D R + LST + GVV A
Sbjct: 170 DQLTPPPPATAFHAGDVVMATVLSQSDVRQFQLSTLQEHCGVVEA 214
>gi|438024593|ref|ZP_20855059.1| sulfite reductase subunit alpha, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|435331085|gb|ELP02307.1| sulfite reductase subunit alpha, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
Length = 404
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|378732188|gb|EHY58647.1| RNA-binding protein Rrp4 and like protein [Exophiala dermatitidis
NIH/UT8656]
Length = 353
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 18/140 (12%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+V PGE + T+ G G YV + + A+L GLL+T + + V +A
Sbjct: 55 IVLPGEAITDDTQWMRGHGTYVTDSSTTIIATLAGLLKTTN---------KLLSVAPLRA 105
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADI----MCVGAKSVREKFSGIIRQQDVRATEIDKV 125
PE G +V+ R+ +V D+ + S G++R R T D++
Sbjct: 106 R-YTPEIGDLVVGRIVEVQKNRWKVDVAAPLLAQLPLSSINLPGGVLR----RRTTADEL 160
Query: 126 DMHLSFRPGDIVRASVLSLG 145
M F+ GD+V A V +G
Sbjct: 161 QMRNYFQEGDLVVAEVQQIG 180
>gi|296241784|ref|YP_003649271.1| RNA-binding protein [Thermosphaera aggregans DSM 11486]
gi|296094368|gb|ADG90319.1| RNA-binding protein (consists of S1 domain and a Zn-ribbon domain)
[Thermosphaera aggregans DSM 11486]
Length = 184
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 11 VTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQ-RPTVEVTGHKA 69
V PGE LG E +G YV K G LR L D+ + T+ V
Sbjct: 7 VVPGEALGVEEEAIPVQGVYVDKQ---------GYLRALVVGTVVMDKLKKTIMVRPANK 57
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
PG++V A V + +A +I A V FSGI+ V + + +
Sbjct: 58 RELGLRPGALVEAIVVSMSDDIAVLNIY--NANGVPVDFSGILHVTQVSSEYVKT--LWD 113
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAE-STAGKLVY 173
RPGDIVRA V++ Y +S LGVV+A S G L+Y
Sbjct: 114 VLRPGDIVRARVIN--SFIPYQVSIKDPGLGVVAARCSVCGDLLY 156
>gi|424815167|ref|ZP_18240318.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia fergusonii ECD227]
gi|325496187|gb|EGC94046.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia fergusonii ECD227]
Length = 587
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V ++ T S + V + S+ +K +G ++DVR EID D
Sbjct: 194 KSRAPVAAPSQSVATGAVNEIHTSPYSKEAPLVASLSINQKITGRNSEKDVRHIEIDLGD 253
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 254 SGLRYQPGD 262
>gi|168820345|ref|ZP_02832345.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|409246625|ref|YP_006887329.1| sulfite reductase (NADPH) flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|205342927|gb|EDZ29691.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|320087359|emb|CBY97124.1| sulfite reductase (NADPH) flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
Length = 599
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|375124748|ref|ZP_09769912.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|445128242|ref|ZP_21380134.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|326628998|gb|EGE35341.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|444855111|gb|ELX80163.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
Length = 599
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|408405672|ref|YP_006863655.1| RNA-binding protein [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408366268|gb|AFU59998.1| putative RNA-binding protein [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 200
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 10/152 (6%)
Query: 6 EEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVT 65
E+ L PGE + E + GK Y+ G +R+ + D + +
Sbjct: 4 EDNKLTLPGERVASIEEFEGGKNTYMTPD---------GTVRSATVGTTVYDLKRRIVKI 54
Query: 66 GHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQ-DVRATEIDK 124
K +P+ G +++ V + + M S ++ + K FS I + RA +
Sbjct: 55 EQKNSPMLPKVGDIIVGYVEMMFSSMVSIKVLYINDKWSEAGFSAIASARIGSRADVERR 114
Query: 125 VDMHLSFRPGDIVRASVLSLGDARAYFLSTAK 156
D +F GDIVR V+SL ++ + T K
Sbjct: 115 GDRRATFHNGDIVRGRVISLLNSTIHLTLTEK 146
>gi|238909720|ref|ZP_04653557.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 599
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|200386611|ref|ZP_03213223.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|199603709|gb|EDZ02254.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
Length = 599
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|438132950|ref|ZP_20873929.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434941148|gb|ELL47642.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
Length = 599
Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|378956568|ref|YP_005214055.1| sulfite reductase (NADPH) flavoprotein subunit beta [Salmonella
enterica subsp. enterica serovar Gallinarum/pullorum
str. RKS5078]
gi|357207179|gb|AET55225.1| sulfite reductase (NADPH) flavoprotein beta subunit [Salmonella
enterica subsp. enterica serovar Gallinarum/pullorum
str. RKS5078]
Length = 590
Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 197 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 256
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 257 SGLRYQPGD 265
>gi|198242803|ref|YP_002216914.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|445145477|ref|ZP_21387439.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445151353|ref|ZP_21390303.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|197937319|gb|ACH74652.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|444846250|gb|ELX71431.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444856253|gb|ELX81291.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
Length = 599
Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|421360529|ref|ZP_15810805.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421363304|ref|ZP_15813546.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421369627|ref|ZP_15819802.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421370268|ref|ZP_15820435.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421378993|ref|ZP_15829072.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421383337|ref|ZP_15833375.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421385014|ref|ZP_15835037.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421390202|ref|ZP_15840178.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421396628|ref|ZP_15846553.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421399407|ref|ZP_15849302.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421405611|ref|ZP_15855441.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421409933|ref|ZP_15859722.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421414999|ref|ZP_15864735.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421417397|ref|ZP_15867107.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421420736|ref|ZP_15870412.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421428381|ref|ZP_15877992.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421430823|ref|ZP_15880409.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421435748|ref|ZP_15885284.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421440167|ref|ZP_15889647.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421443775|ref|ZP_15893214.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|421449244|ref|ZP_15898628.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|436602042|ref|ZP_20513082.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436715304|ref|ZP_20518791.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|436799603|ref|ZP_20523889.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436807545|ref|ZP_20527588.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436818436|ref|ZP_20535069.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436832659|ref|ZP_20536949.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436852994|ref|ZP_20543019.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436861217|ref|ZP_20548401.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436867553|ref|ZP_20552707.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436872898|ref|ZP_20555780.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436880432|ref|ZP_20560191.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436891523|ref|ZP_20566223.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436899569|ref|ZP_20570980.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436903080|ref|ZP_20573544.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436914835|ref|ZP_20579682.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436919535|ref|ZP_20582316.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436928826|ref|ZP_20588032.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436938561|ref|ZP_20593348.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436945877|ref|ZP_20597705.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436955341|ref|ZP_20602216.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436966074|ref|ZP_20606743.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436969535|ref|ZP_20608532.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436985277|ref|ZP_20614862.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436993414|ref|ZP_20618207.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437004858|ref|ZP_20622088.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437018725|ref|ZP_20626930.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437027409|ref|ZP_20630298.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437043081|ref|ZP_20636594.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437050755|ref|ZP_20640900.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437061987|ref|ZP_20647353.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437066903|ref|ZP_20649965.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437073870|ref|ZP_20653312.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437082955|ref|ZP_20658698.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437097696|ref|ZP_20665151.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437110481|ref|ZP_20667827.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437118900|ref|ZP_20670635.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437129440|ref|ZP_20675916.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437141850|ref|ZP_20683534.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437146068|ref|ZP_20685857.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437153254|ref|ZP_20690360.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437159060|ref|ZP_20693648.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437168700|ref|ZP_20699138.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437175930|ref|ZP_20703106.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437184400|ref|ZP_20708265.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437254362|ref|ZP_20715618.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|437264645|ref|ZP_20719921.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437269496|ref|ZP_20722739.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437277707|ref|ZP_20727066.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437302169|ref|ZP_20733503.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437315776|ref|ZP_20737464.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437327608|ref|ZP_20740550.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437341677|ref|ZP_20744800.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437371387|ref|ZP_20749348.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|437417433|ref|ZP_20753852.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437463281|ref|ZP_20762963.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437484042|ref|ZP_20769126.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437495798|ref|ZP_20772942.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437509349|ref|ZP_20776488.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437532847|ref|ZP_20780950.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437555679|ref|ZP_20784646.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437580398|ref|ZP_20791801.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437592561|ref|ZP_20795110.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437605173|ref|ZP_20799352.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437619257|ref|ZP_20803409.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437661509|ref|ZP_20813028.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437679598|ref|ZP_20818088.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437729875|ref|ZP_20831007.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|437808378|ref|ZP_20840083.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|438101618|ref|ZP_20864445.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438116186|ref|ZP_20870705.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|445204222|ref|ZP_21401212.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445219236|ref|ZP_21402618.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445259212|ref|ZP_21409643.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|445336948|ref|ZP_21415833.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|395981096|gb|EJH90318.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395981750|gb|EJH90971.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395987765|gb|EJH96927.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395995328|gb|EJI04393.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|395995571|gb|EJI04635.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396007438|gb|EJI16394.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396009082|gb|EJI18015.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396015261|gb|EJI24144.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396018646|gb|EJI27508.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396023685|gb|EJI32483.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396023866|gb|EJI32658.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396027501|gb|EJI36264.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396035034|gb|EJI43715.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396042232|gb|EJI50854.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396043781|gb|EJI52379.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396048416|gb|EJI56965.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396054649|gb|EJI63141.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396056160|gb|EJI64636.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396068302|gb|EJI76650.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|396069406|gb|EJI77744.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|396070541|gb|EJI78869.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|434959633|gb|ELL53079.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434968501|gb|ELL61253.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434970980|gb|ELL63541.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434974591|gb|ELL66935.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434981258|gb|ELL73145.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434984339|gb|ELL76079.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434985661|gb|ELL77348.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434987931|gb|ELL79541.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|434992705|gb|ELL84144.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|434999755|gb|ELL90929.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435005276|gb|ELL96198.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435005652|gb|ELL96572.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435012704|gb|ELM03379.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435019510|gb|ELM09954.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435022917|gb|ELM13213.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435029370|gb|ELM19428.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435033516|gb|ELM23408.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435034085|gb|ELM23975.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435035449|gb|ELM25294.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435045717|gb|ELM35343.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435046484|gb|ELM36099.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435058853|gb|ELM48160.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435062907|gb|ELM52081.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435065091|gb|ELM54197.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435072149|gb|ELM61078.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435081085|gb|ELM69739.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435083731|gb|ELM72332.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435085468|gb|ELM74021.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435088471|gb|ELM76928.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435093459|gb|ELM81799.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435097709|gb|ELM85968.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435106340|gb|ELM94357.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435107671|gb|ELM95654.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435108528|gb|ELM96493.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435118731|gb|ELN06382.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435126660|gb|ELN14054.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435128018|gb|ELN15378.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435131622|gb|ELN18833.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435136313|gb|ELN23403.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435141005|gb|ELN27947.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435149177|gb|ELN35873.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435150535|gb|ELN37207.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435156601|gb|ELN43091.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435157894|gb|ELN44318.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|435159652|gb|ELN45970.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435161011|gb|ELN47253.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435172443|gb|ELN57986.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435173103|gb|ELN58628.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435178249|gb|ELN63485.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435180252|gb|ELN65360.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435191789|gb|ELN76345.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435193343|gb|ELN77822.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435202068|gb|ELN85922.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435206441|gb|ELN89966.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435217473|gb|ELN99907.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435218558|gb|ELO00959.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435226588|gb|ELO08153.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435232632|gb|ELO13721.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435240649|gb|ELO21039.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435242129|gb|ELO22440.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435242396|gb|ELO22701.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435252910|gb|ELO32401.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435257116|gb|ELO36410.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435258537|gb|ELO37797.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435268296|gb|ELO46886.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435272660|gb|ELO51049.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435289987|gb|ELO66937.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|435300046|gb|ELO76141.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435324301|gb|ELO96234.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435327701|gb|ELO99352.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|444861909|gb|ELX86778.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444871149|gb|ELX95599.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444873846|gb|ELX98125.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444888780|gb|ELY12302.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 599
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|375120410|ref|ZP_09765577.1| sulfite reductase [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|326624677|gb|EGE31022.1| sulfite reductase [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
Length = 590
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 197 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 256
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 257 SGLRYQPGD 265
>gi|16766254|ref|NP_461869.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|167993191|ref|ZP_02574286.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|378451702|ref|YP_005239062.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378985538|ref|YP_005248694.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378990272|ref|YP_005253436.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379702203|ref|YP_005243931.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|427615467|ref|ZP_18943206.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427657179|ref|ZP_18952834.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|585030|sp|P38039.2|CYSJ_SALTY RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|153929|gb|AAA27046.1| NADPH-sulfite reducatase flavoprotein component [Salmonella
enterica subsp. enterica serovar Typhimurium]
gi|16421498|gb|AAL21828.1| sulfite reductase, beta (flavoprotein) subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|205328765|gb|EDZ15529.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|267995081|gb|ACY89966.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|312913967|dbj|BAJ37941.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|323131302|gb|ADX18732.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|332989819|gb|AEF08802.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379657326|emb|CBW19026.2| sulfite reductase (NADPH) flavoprotein beta subunit [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|414034271|gb|EKT17203.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414045111|gb|EKT27538.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
Length = 599
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|20093820|ref|NP_613667.1| exosome complex RNA-binding protein Rrp4 [Methanopyrus kandleri
AV19]
gi|29336818|sp|Q8TYC0.1|ECR1_METKA RecName: Full=Probable exosome complex RNA-binding protein 1
gi|19886743|gb|AAM01597.1| Predicted exosome subunit, RNA-binding protein Rrp4 (contain S1
domain and KH domain) [Methanopyrus kandleri AV19]
Length = 239
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 35/161 (21%)
Query: 6 EEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVT 65
E+ +VTPGE+L + +V A +G Y + VY+ +TGL V++
Sbjct: 9 EDRQVVTPGELLARG-QVIASEGTYTSGDE--VYSKVTGL----------------VDID 49
Query: 66 GHKAH-----GPV-PEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRA 119
G + GP P PG V+ V +V + +S I VR I+ +
Sbjct: 50 GRRIRVIPLAGPYRPSPGDFVVGIVEEV--KFSSWLI------DVRAPLPAILHVSNALE 101
Query: 120 TEIDKVDMHLS--FRPGDIVRASVLSLGDARAYFLSTAKND 158
E+D ++ LS +RPGD++ A V + + LS ++D
Sbjct: 102 EEVDLIETDLSRYYRPGDVITAVVREVDPVQRVELSLLEDD 142
>gi|422027158|ref|ZP_16373504.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422032196|ref|ZP_16378311.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427553829|ref|ZP_18928805.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427571383|ref|ZP_18933520.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427592091|ref|ZP_18938319.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427639521|ref|ZP_18948086.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427662494|ref|ZP_18957797.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427676016|ref|ZP_18962613.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427800118|ref|ZP_18967924.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|414015413|gb|EKS99229.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414016409|gb|EKT00182.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414016735|gb|EKT00495.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414029657|gb|EKT12814.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414031204|gb|EKT14279.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414044583|gb|EKT27025.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414049987|gb|EKT32176.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414057564|gb|EKT39318.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414063717|gb|EKT44812.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
Length = 599
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLHYQPGD 274
>gi|205353888|ref|YP_002227689.1| sulfite reductase (NADPH) flavoprotein subunit beta [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|205273669|emb|CAR38659.1| sulfite reductase (NADPH) flavoprotein beta subunit [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
Length = 539
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 146 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 205
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 206 SGLRYQPGD 214
>gi|197262896|ref|ZP_03162970.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197241151|gb|EDY23771.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
Length = 599
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|383497619|ref|YP_005398308.1| sulfite reductase (NADPH) flavoprotein subunit beta [Salmonella
enterica subsp. enterica serovar Typhimurium str. 798]
gi|380464440|gb|AFD59843.1| sulfite reductase (NADPH) flavoprotein beta subunit [Salmonella
enterica subsp. enterica serovar Typhimurium str. 798]
Length = 590
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 197 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 256
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 257 SGLRYQPGD 265
>gi|207858208|ref|YP_002244859.1| sulfite reductase (NADPH) flavoprotein subunit beta [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|206710011|emb|CAR34366.1| sulfite reductase (NADPH) flavoprotein beta subunit [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
Length = 539
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 146 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 205
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 206 SGLRYQPGD 214
>gi|62181449|ref|YP_217866.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|224584727|ref|YP_002638525.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|375115787|ref|ZP_09760957.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|75481189|sp|Q57KH7.3|CYSJ_SALCH RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|62129082|gb|AAX66785.1| sulfite reductase, beta (flavoprotein) subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|224469254|gb|ACN47084.1| sulfite reductase (NADPH) flavoprotein beta subunit [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|322715933|gb|EFZ07504.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
Length = 599
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|402470575|gb|EJW04731.1| hypothetical protein EDEG_01074 [Edhazardia aedis USNM 41457]
Length = 122
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%)
Query: 74 PEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRP 133
P+ G++ V KV A I+ + R K+ +++ D ++ DK + ++
Sbjct: 26 PKIGNIARCIVDKVTPSQAFLYILGLDGMKTRIKYRAVLKLNDYKSNVDDKTFLTNIYKK 85
Query: 134 GDIVRASVLSLGDARAYFLSTAKNDLGVV 162
GD+ + GD F+ST + LGVV
Sbjct: 86 GDVFDVLIHGFGDHNGMFVSTVSDGLGVV 114
>gi|378446304|ref|YP_005233936.1| sulfite reductase (NADPH) flavoprotein subunit beta [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|378700859|ref|YP_005182816.1| sulfite reductase (NADPH) flavoprotein subunit beta [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|261248083|emb|CBG25918.1| sulfite reductase (NADPH) flavoprotein beta subunit [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
Length = 539
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D + SV +K +G ++DVR EID D
Sbjct: 146 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGD 205
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 206 SGLRYQPGD 214
>gi|321477199|gb|EFX88158.1| hypothetical protein DAPPUDRAFT_305543 [Daphnia pulex]
Length = 292
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 28/162 (17%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
LVTPG ++ K T G G Y+ + +Y+S+ G++ + +Q +V +
Sbjct: 25 LVTPGSLITKETGFMRGHGTYM--QDDCLYSSVAGVVERV-------NQLISVRPLKSRY 75
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDV--------RATE 121
HG E G VVI RVT+V + D + ++ Q V R +
Sbjct: 76 HG---EIGDVVIGRVTEVSQKRWKLD--------TNARLDSVLLLQSVNLPGGELRRRSA 124
Query: 122 IDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVS 163
D++ M + GD+V A V ++ + A L T G +S
Sbjct: 125 EDELAMRQYLKEGDLVSAEVQNIFNDGALSLHTRSMKYGKLS 166
>gi|161615865|ref|YP_001589830.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|189082753|sp|A9N2E6.1|CYSJ_SALPB RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|161365229|gb|ABX68997.1| hypothetical protein SPAB_03657 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 599
Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGSVNDIHTSPYTKDAPLAATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|417541428|ref|ZP_12193167.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Wandsworth str. A4-580]
gi|353660807|gb|EHD00309.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Wandsworth str. A4-580]
Length = 590
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 197 KSRAPVAAPSQSVATGSVNDIHTSPYTKDAPLAATLSVNQKITGRNSEKDVRHIEIDLGD 256
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 257 SGLRYQPGD 265
>gi|430811223|emb|CCJ31317.1| unnamed protein product [Pneumocystis jirovecii]
Length = 312
Score = 39.7 bits (91), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 25/135 (18%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+VTPGE + + G G YV N VYAS+ G ++ ++ + V K+
Sbjct: 45 VVTPGEFITNDPQFMRGHGTYVRDKN-TVYASVVGTVQRVN---------KLISVKPLKS 94
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAK-------SVREKFSGIIRQQDVRATEI 122
+PE G +VI R+ KV + DI G+K S GI+R R +E
Sbjct: 95 R-YLPEIGDLVIGRIVKVGNKRWKVDI---GSKQDAILMLSSINLPGGILR----RKSET 146
Query: 123 DKVDMHLSFRPGDIV 137
D + M F GD++
Sbjct: 147 DVLKMRTFFSEGDLL 161
>gi|429217341|ref|YP_007175331.1| RNA-binding protein [Caldisphaera lagunensis DSM 15908]
gi|429133870|gb|AFZ70882.1| putative RNA-binding protein (consists of S1 domain and a Zn-ribbon
domain) [Caldisphaera lagunensis DSM 15908]
Length = 210
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 23/173 (13%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPD-QRPTVEVTGHK 68
+V PGEV+ + E G+G Y+ TG LR++ + D T+ V +K
Sbjct: 9 VVVPGEVIAQQEEFVEGEGVYIDTE--------TGYLRSMFLGKIAIDFNNRTISVNSYK 60
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKF--------SGIIRQQDVRAT 120
+P+ S+V+ V+ V + DI V R K+ SG I V
Sbjct: 61 KL-KLPKKNSIVLGSVSSVRENIIFVDIYGVIVLYPRPKWEFEFSSPLSGAIISNQVGVD 119
Query: 121 EIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVV-SAESTAGKLV 172
+ + D+ +PGDI+ A V++ + Y LS GV+ S S G+++
Sbjct: 120 KFN--DLMDIVKPGDIILAKVIN--SSNPYNLSLKGPQYGVIYSMCSKCGEIM 168
>gi|330795128|ref|XP_003285627.1| hypothetical protein DICPUDRAFT_76545 [Dictyostelium purpureum]
gi|325084449|gb|EGC37877.1| hypothetical protein DICPUDRAFT_76545 [Dictyostelium purpureum]
Length = 341
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 27/146 (18%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
LV PG+++ + E G G + HNG + L+ ++ D D+ +V+ +
Sbjct: 56 LVIPGQIISREGEYLKGHGTF---HNG------SNLIASVCGTLDKVDRLISVKALKSRY 106
Query: 70 HGPVPEPGSVVIARVTKVMTRMASAD-------IMCVGAKSVREKFSGIIRQQDVRATEI 122
HG V G +++ R+T++ ++ D I+ + A ++ GI R R T
Sbjct: 107 HGEV---GDIIVGRITEISSKRWKVDVNSRLDYILMLSAINLP---GGIQR----RRTSA 156
Query: 123 DKVDMHLSFRPGDIVRASV-LSLGDA 147
D++ M F D+V A V + +GD
Sbjct: 157 DELQMRNFFVENDLVYAEVQMIMGDG 182
>gi|56414893|ref|YP_151968.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|449784974|ref|YP_002143458.2| sulfite reductase (NADPH) flavoprotein subunit beta [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|81359850|sp|Q5PEH7.3|CYSJ_SALPA RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|56129150|gb|AAV78656.1| sulfite reductase (NADPH) flavoprotein beta subunit [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
Length = 599
Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|418512289|ref|ZP_13078532.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|366083796|gb|EHN47712.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
Length = 599
Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|168242693|ref|ZP_02667625.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|194449739|ref|YP_002046906.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|386592632|ref|YP_006089032.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Heidelberg str. B182]
gi|419732011|ref|ZP_14258919.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419735634|ref|ZP_14262507.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419736976|ref|ZP_14263800.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419741800|ref|ZP_14268478.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419750471|ref|ZP_14276928.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421571480|ref|ZP_16017152.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421573261|ref|ZP_16018901.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421580334|ref|ZP_16025892.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421584020|ref|ZP_16029530.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|194408043|gb|ACF68262.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|205338158|gb|EDZ24922.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|381290642|gb|EIC31906.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381293958|gb|EIC35098.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381306396|gb|EIC47270.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|381307015|gb|EIC47881.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381315167|gb|EIC55930.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|383799673|gb|AFH46755.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Heidelberg str. B182]
gi|402520090|gb|EJW27444.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402520423|gb|EJW27772.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402528746|gb|EJW35996.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402531360|gb|EJW38571.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
Length = 599
Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|197247870|ref|YP_002147847.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|440762251|ref|ZP_20941314.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440770175|ref|ZP_20949128.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440772876|ref|ZP_20951778.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|197211573|gb|ACH48970.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|436412378|gb|ELP10320.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|436417607|gb|ELP15499.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436423867|gb|ELP21665.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
Length = 599
Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|437822489|ref|ZP_20843440.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|435306636|gb|ELO81905.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
Length = 599
Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|168231028|ref|ZP_02656086.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|194472210|ref|ZP_03078194.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|421886134|ref|ZP_16317314.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|194458574|gb|EDX47413.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|205334560|gb|EDZ21324.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|379984293|emb|CCF89587.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
Length = 599
Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|417520262|ref|ZP_12182210.1| Sulfite reductase (NADPH) flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Uganda str. R8-3404]
gi|353644435|gb|EHC88393.1| Sulfite reductase (NADPH) flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Uganda str. R8-3404]
Length = 590
Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 197 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 256
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 257 SGLRYQPGD 265
>gi|204928154|ref|ZP_03219354.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|204322476|gb|EDZ07673.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
Length = 599
Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|417343433|ref|ZP_12124005.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Baildon str. R6-199]
gi|357955405|gb|EHJ81230.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Baildon str. R6-199]
Length = 590
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 197 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 256
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 257 SGLRYQPGD 265
>gi|452123235|ref|YP_007473483.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|451912239|gb|AGF84045.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 599
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|417426062|ref|ZP_12160610.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Mississippi str.
A4-633]
gi|353616947|gb|EHC68064.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Mississippi str.
A4-633]
Length = 590
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 197 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 256
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 257 SGLRYQPGD 265
>gi|168261918|ref|ZP_02683891.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|205349170|gb|EDZ35801.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
Length = 599
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGSVNDIHTSPYTKDAPLAAPLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|417367652|ref|ZP_12139452.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Hvittingfoss str.
A4-620]
gi|353588690|gb|EHC47675.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Hvittingfoss str.
A4-620]
Length = 590
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 197 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 256
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 257 SGLRYQPGD 265
>gi|417327859|ref|ZP_12113164.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
gi|353569481|gb|EHC34037.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
Length = 590
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 197 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 256
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 257 SGLRYQPGD 265
>gi|375002680|ref|ZP_09727020.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
gi|353077368|gb|EHB43128.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
Length = 599
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRDSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|197095298|emb|CAR60854.1| sulfite reductase (NADPH) flavoprotein beta subunit [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
Length = 539
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 146 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 205
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 206 SGLRYQPGD 214
>gi|168463907|ref|ZP_02697824.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|418761912|ref|ZP_13318048.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418765280|ref|ZP_13321369.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418773144|ref|ZP_13329136.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418773613|ref|ZP_13329586.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418779694|ref|ZP_13335592.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418782801|ref|ZP_13338658.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418801177|ref|ZP_13356814.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|419787117|ref|ZP_14312832.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419792374|ref|ZP_14318014.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|195633588|gb|EDX52002.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|392618746|gb|EIX01139.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392621060|gb|EIX03426.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392730401|gb|EIZ87646.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392738417|gb|EIZ95561.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392741032|gb|EIZ98143.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392751902|gb|EJA08849.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392752653|gb|EJA09593.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392759061|gb|EJA15921.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392780898|gb|EJA37549.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
Length = 599
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLAATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|194444907|ref|YP_002042189.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|418789921|ref|ZP_13345705.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418795079|ref|ZP_13350791.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418797246|ref|ZP_13352932.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418806143|ref|ZP_13361716.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418810048|ref|ZP_13365590.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418818386|ref|ZP_13373864.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418820208|ref|ZP_13375642.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418832179|ref|ZP_13387122.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418836833|ref|ZP_13391716.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418842179|ref|ZP_13396991.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418843496|ref|ZP_13398293.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418849729|ref|ZP_13404452.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418855289|ref|ZP_13409946.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418856756|ref|ZP_13411392.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418862375|ref|ZP_13416915.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418870433|ref|ZP_13424852.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|194403570|gb|ACF63792.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|392759671|gb|EJA16517.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392759678|gb|EJA16523.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392768685|gb|EJA25431.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392782430|gb|EJA39065.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392783259|gb|EJA39885.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392785816|gb|EJA42381.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392792965|gb|EJA49416.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392797930|gb|EJA54224.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392800544|gb|EJA56780.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392807254|gb|EJA63332.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392816832|gb|EJA72754.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392820168|gb|EJA76022.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392821852|gb|EJA77673.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392830846|gb|EJA86490.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|392835641|gb|EJA91232.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392835777|gb|EJA91366.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
Length = 599
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLAATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|167550196|ref|ZP_02343953.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205324698|gb|EDZ12537.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
Length = 599
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGSVNDIHTSPYTKDAPLAATLSVDQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|417513168|ref|ZP_12177292.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Senftenberg str.
A4-543]
gi|353637666|gb|EHC83423.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Senftenberg str.
A4-543]
Length = 399
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 6 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 65
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 66 SGLRYQPGD 74
>gi|289808214|ref|ZP_06538843.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 254
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 134 KSRAPVAVPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 193
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 194 SGLRYQPGD 202
>gi|213022664|ref|ZP_03337111.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 468
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAVPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|213422337|ref|ZP_03355403.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 530
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAVPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|169623981|ref|XP_001805397.1| hypothetical protein SNOG_15238 [Phaeosphaeria nodorum SN15]
gi|111056343|gb|EAT77463.1| hypothetical protein SNOG_15238 [Phaeosphaeria nodorum SN15]
Length = 341
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Query: 41 SLTGLLRTLSPPPDSPDQRPTVEVT-GHKAHGPVPEPGSVVIARVTKVMTRMASADIMCV 99
SL + TL PP PD +P +++ H+ P P P A M + A ++ V
Sbjct: 99 SLLDYMSTLPTPPMRPDNQPALDLAYQHEKEFPTPGPDGEYPAHPGTFMRHLLEAKVILV 158
Query: 100 GA--KSVRE--KFSGIIRQQDVRAT-EIDKVDMHLSFRPGDIVRASVLSLGDARAYFLST 154
GA K + E + +G++R+ A E++K LS P + L GD R + T
Sbjct: 159 GACPKPILEIMRENGLVRRDMPGAHLELNKFVFKLSDLPKTMELPEGLRWGDMREQDMVT 218
Query: 155 AK 156
K
Sbjct: 219 VK 220
>gi|213615973|ref|ZP_03371799.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 488
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAVPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|422807975|ref|ZP_16856403.1| sulfite reductase flavoprotein [Escherichia fergusonii B253]
gi|324111398|gb|EGC05380.1| sulfite reductase flavoprotein [Escherichia fergusonii B253]
Length = 599
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V K+ PV SV V ++ T S D V SV +K +G ++DVR EI
Sbjct: 202 VDALKSRSPVAASSQSVATGAVNEIHTSPYSKDAPLVANLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|213581714|ref|ZP_03363540.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 565
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAVPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|16761720|ref|NP_457337.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29143204|ref|NP_806546.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213163458|ref|ZP_03349168.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213852990|ref|ZP_03382522.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|378961014|ref|YP_005218500.1| sulfite reductase [NADPH] flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Typhi str. P-stx-12]
gi|81513135|sp|Q8Z458.3|CYSJ_SALTI RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|25284889|pir||AG0858 sulfite reductase (NADPH) flavoprotein beta chain [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16504021|emb|CAD06054.1| sulfite reductase (NADPH) flavoprotein beta subunit [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29138837|gb|AAO70406.1| sulfite reductase (NADPH) flavoprotein beta subunit [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|374354886|gb|AEZ46647.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Typhi str. P-stx-12]
Length = 599
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAVPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|213648294|ref|ZP_03378347.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
Length = 599
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D SV +K +G ++DVR EID D
Sbjct: 206 KSRAPVAVPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|169865500|ref|XP_001839349.1| exosome complex exonuclease rrp4 [Coprinopsis cinerea okayama7#130]
gi|116499570|gb|EAU82465.1| exosome complex exonuclease rrp4 [Coprinopsis cinerea okayama7#130]
Length = 314
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 59/145 (40%), Gaps = 32/145 (22%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
L PGE L + E G G YV N V AS+TG + +R VT A
Sbjct: 42 LTCPGETLTSSHEYMRGHGTYV--ENEEVIASVTGTI-----------ERVNRLVTVRPA 88
Query: 70 HGPV-PEPGSVVIARVTKVMTRMASADIMCVGAKSVREKF---------SGIIRQQDVRA 119
+ PE G +V+ R+T+V R D A S ++ G+ R R
Sbjct: 89 NCRYNPEVGDLVVGRITEVQPRRWKVD-----ANSRQDAVLMLSSVNLPGGVQR----RK 139
Query: 120 TEIDKVDMHLSFRPGDIVRASVLSL 144
E D++ M F GD++ A V S
Sbjct: 140 LESDELQMRTFFEEGDLLVAEVQSF 164
>gi|119719435|ref|YP_919930.1| RNA-binding S1 domain-containing protein [Thermofilum pendens Hrk
5]
gi|119524555|gb|ABL77927.1| RNA binding S1 domain protein [Thermofilum pendens Hrk 5]
Length = 188
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+V PGE +G A E G+ YV + G + A G+L+ + V+V K
Sbjct: 6 VVIPGENVGVAEEYLPGENVYVDEETGDLKAKRVGVLK-------EERAQHIVKVFPFKP 58
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVR--EKFSGIIRQQDVRATEIDKVDM 127
G + + G VV A V ++ +A +I V K + +GI+ + ++ + +
Sbjct: 59 DGQLGK-GDVVYAVVKQIRDPVAIVEIFYVENKRRKLIPPLTGILHVSNASSSRVRLLSD 117
Query: 128 HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAESTA 168
+ + GD++RA++ G Y+LS + GVV A+ +
Sbjct: 118 VIGY--GDVIRATIADEGGP-PYYLSIRGREFGVVVAKCPS 155
>gi|387593044|gb|EIJ88068.1| hypothetical protein NEQG_01512 [Nematocida parisii ERTm3]
gi|387596244|gb|EIJ93866.1| hypothetical protein NEPG_01438 [Nematocida parisii ERTm1]
Length = 135
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 85 TKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSL 144
V+ R+ + D G KS+ + +I ++D + D+ ++ F PGD V VLSL
Sbjct: 32 NHVLLRIIAID----GIKSI--EVPAVIHREDAQYGIKDETKLNELFSPGDTVHGRVLSL 85
Query: 145 GDARAYFLSTAKNDLGVVSAES 166
G++ +STA GVV A+
Sbjct: 86 GESGNVVISTADTAHGVVKAKD 107
>gi|367030457|ref|XP_003664512.1| hypothetical protein MYCTH_2307431 [Myceliophthora thermophila ATCC
42464]
gi|347011782|gb|AEO59267.1| hypothetical protein MYCTH_2307431 [Myceliophthora thermophila ATCC
42464]
Length = 367
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 21/148 (14%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTG-LLRTLSPPPDSPDQRPTVEVTGHK 68
+VTPGEV+ + + G G YVA H + +S+ G + RT + V +
Sbjct: 73 VVTPGEVITEDPQWMRGHGTYVAPHTTAIVSSVAGTVTRT----------NKLLSVRPLR 122
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADI----MCVGAKSVREKFSGIIRQQDVRATEIDK 124
A PE G +V+ R+ +V + D+ + S GI+R++ TE D+
Sbjct: 123 ARY-TPEVGDLVVGRIVEVQAKRWRVDVGSTQLAALPLSAINLPGGILRKR----TETDE 177
Query: 125 VDMHLSFRPGDIVRASVLSL-GDARAYF 151
+ + F GD++ A V L GD A
Sbjct: 178 LQIRTFFAEGDLLVAEVQQLFGDGGAVL 205
>gi|416425420|ref|ZP_11692309.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416428395|ref|ZP_11693895.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416438955|ref|ZP_11699832.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416444960|ref|ZP_11704037.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416451604|ref|ZP_11708354.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416459818|ref|ZP_11714263.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416471739|ref|ZP_11719351.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416481381|ref|ZP_11723234.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416490112|ref|ZP_11726663.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416501249|ref|ZP_11731964.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416508931|ref|ZP_11736248.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416515455|ref|ZP_11738635.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416530225|ref|ZP_11744841.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416537071|ref|ZP_11748687.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416546987|ref|ZP_11754328.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416550806|ref|ZP_11756132.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416562674|ref|ZP_11762310.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416577066|ref|ZP_11769592.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416586275|ref|ZP_11775432.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416594362|ref|ZP_11780341.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416598147|ref|ZP_11782534.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416606661|ref|ZP_11787902.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416612706|ref|ZP_11791702.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416617912|ref|ZP_11794356.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416631918|ref|ZP_11801289.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416636641|ref|ZP_11803176.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416647268|ref|ZP_11808267.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416662863|ref|ZP_11816041.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416670102|ref|ZP_11819816.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416674953|ref|ZP_11821276.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416693406|ref|ZP_11826725.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416706158|ref|ZP_11831417.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416712163|ref|ZP_11835874.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416718359|ref|ZP_11840467.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416723287|ref|ZP_11844052.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416728169|ref|ZP_11847489.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416741374|ref|ZP_11855095.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416746669|ref|ZP_11857938.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416753602|ref|ZP_11860921.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416761759|ref|ZP_11865810.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416768707|ref|ZP_11870705.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|418485987|ref|ZP_13054968.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418490433|ref|ZP_13056978.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418495959|ref|ZP_13062397.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418498776|ref|ZP_13065190.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418505451|ref|ZP_13071797.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418510132|ref|ZP_13076419.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418524738|ref|ZP_13090723.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|322614204|gb|EFY11138.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322621704|gb|EFY18557.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624005|gb|EFY20839.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322628899|gb|EFY25681.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322633376|gb|EFY30118.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636048|gb|EFY32756.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322639596|gb|EFY36283.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644304|gb|EFY40847.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649813|gb|EFY46237.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653528|gb|EFY49857.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657622|gb|EFY53891.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664531|gb|EFY60725.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667355|gb|EFY63519.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671242|gb|EFY67367.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322677862|gb|EFY73925.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681036|gb|EFY77069.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686299|gb|EFY82282.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323196123|gb|EFZ81285.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198022|gb|EFZ83143.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323205090|gb|EFZ90069.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209878|gb|EFZ94793.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323214805|gb|EFZ99553.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222534|gb|EGA06899.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323226414|gb|EGA10622.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230707|gb|EGA14825.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234942|gb|EGA19028.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238981|gb|EGA23031.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244662|gb|EGA28668.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249828|gb|EGA33729.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323251046|gb|EGA34921.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257214|gb|EGA40914.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323263282|gb|EGA46819.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323267533|gb|EGA51017.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323271060|gb|EGA54488.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|363551645|gb|EHL35962.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363551754|gb|EHL36066.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363563763|gb|EHL47829.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363564011|gb|EHL48075.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363567871|gb|EHL51867.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363572452|gb|EHL56343.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|366055099|gb|EHN19440.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366058475|gb|EHN22764.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366066074|gb|EHN30250.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366067758|gb|EHN31906.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366073528|gb|EHN37601.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366077135|gb|EHN41157.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366830711|gb|EHN57581.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372207597|gb|EHP21096.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
Length = 599
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D +V +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRDSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|417360405|ref|ZP_12134537.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Give str. S5-487]
gi|353586800|gb|EHC46277.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Give str. S5-487]
Length = 599
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D +V +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRDSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|417533414|ref|ZP_12187470.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Urbana str. R8-2977]
gi|353660711|gb|EHD00246.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Urbana str. R8-2977]
Length = 590
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D +V +K +G ++DVR EID D
Sbjct: 197 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRNSEKDVRHIEIDLGD 256
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 257 SGLRYQPGD 265
>gi|417393166|ref|ZP_12155758.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Minnesota str. A4-603]
gi|353609624|gb|EHC62870.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Minnesota str. A4-603]
Length = 590
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D +V +K +G ++DVR EID D
Sbjct: 197 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRNSEKDVRHIEIDLGD 256
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 257 SGLRYQPGD 265
>gi|417385287|ref|ZP_12150391.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Johannesburg str.
S5-703]
gi|353606263|gb|EHC60535.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Johannesburg str.
S5-703]
Length = 590
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D +V +K +G ++DVR EID D
Sbjct: 197 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRNSEKDVRHIEIDLGD 256
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 257 SGLRYQPGD 265
>gi|417478920|ref|ZP_12171714.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Rubislaw str. A4-653]
gi|353636985|gb|EHC82915.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Rubislaw str. A4-653]
Length = 590
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D +V +K +G ++DVR EID D
Sbjct: 197 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRNSEKDVRHIEIDLGD 256
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 257 SGLRYQPGD 265
>gi|416570472|ref|ZP_11766108.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|363575345|gb|EHL59199.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
Length = 599
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D +V +K +G ++DVR EID D
Sbjct: 206 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRDSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|417469543|ref|ZP_12165883.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Montevideo str. S5-403]
gi|353627325|gb|EHC75653.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Montevideo str. S5-403]
Length = 602
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D +V +K +G ++DVR EID D
Sbjct: 197 KSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRDSEKDVRHIEIDLGD 256
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 257 SGLRYQPGD 265
>gi|389851564|ref|YP_006353798.1| exosome complex RNA-binding protein Csl4 [Pyrococcus sp. ST04]
gi|388248870|gb|AFK21723.1| exosome complex RNA-binding protein Csl4 [Pyrococcus sp. ST04]
Length = 163
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 72 PVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE----KFSGIIRQQDVRATEIDKVDM 127
P+P+ G +V ARV V + ++ + K RE K +GI Q V+ ++ D+
Sbjct: 33 PIPKVGDIVYARVIDVKQQAVLLRMIKIEGKDNREIATSKLAGIHISQ-VKDGFVE--DL 89
Query: 128 HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
F+ GDIVRA V++ + L+T DLGVV A
Sbjct: 90 RNEFKIGDIVRARVIT-DEKSPIQLTTKDPDLGVVYA 125
>gi|190405851|gb|EDV09118.1| 3'-5' exoribonuclease [Saccharomyces cerevisiae RM11-1a]
Length = 359
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 34/151 (22%)
Query: 5 EEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLL----RTLSPPPDSPDQRP 60
E + +VTPGE++ G G Y + + Y+S+ G + R LS P
Sbjct: 49 ESDSQIVTPGELVTDDPIWMRGHGTYFLDN--MTYSSVAGTVSRVNRLLSVIP------- 99
Query: 61 TVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADI-------MCVGAKSVREKFSGIIR 113
+ G A PE G V+ R+T+V + DI + +G+ ++ GI+R
Sbjct: 100 ---LKGRYA----PETGDHVVGRITEVGNKRWKVDIGGKQHAVLMLGSVNLP---GGILR 149
Query: 114 QQDVRATEIDKVDMHLSFRPGDIVRASVLSL 144
R +E D++ M + GD++ A V SL
Sbjct: 150 ----RKSESDELQMRSFLKEGDLLNAEVQSL 176
>gi|218884725|ref|YP_002429107.1| putative RNA-binding protein [Desulfurococcus kamchatkensis 1221n]
gi|218766341|gb|ACL11740.1| Predicted RNA-binding protein (consists of S1 domain and a
Zn-ribbon domain) [Desulfurococcus kamchatkensis 1221n]
Length = 181
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
+V PGE L E +GAY+ GL+ + + GL D+
Sbjct: 4 IVMPGEPLAVEEEALPLQGAYI-DEKGLIRSQVFGL--------KVFDRYKKQVYVRQVK 54
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHL 129
+ + +PG++V A V V +A I + + V + SGII +A+ +
Sbjct: 55 NIELIKPGTIVEAYVEAVTDELAFLKIYSIEGQRV--EASGIIHVS--QASNEFTQSLLG 110
Query: 130 SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAE-STAGKLVY 173
+ RPGD V+A VL+ ++ Y L+ + LGV+ A S G L+Y
Sbjct: 111 AIRPGDFVKAKVLN--NSIPYQLTIKEPGLGVIEAYCSVCGSLLY 153
>gi|432373333|ref|ZP_19616370.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE11]
gi|430894840|gb|ELC17124.1| sulfite reductase [NADPH] flavoprotein alpha-component [Escherichia
coli KTE11]
Length = 597
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 78 SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDMHLSFRPGD 135
SV V ++ T S + V + SV +K +G ++DVR EID D L ++PGD
Sbjct: 215 SVATGAVNEIHTSPYSKEAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGD 272
>gi|338708066|ref|YP_004662267.1| sulfite reductase (NADPH) flavoprotein subunit alpha [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
gi|336294870|gb|AEI37977.1| sulfite reductase (NADPH) flavoprotein, alpha chain [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
Length = 602
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 73 VPEPGSVVIARVT-----KVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVDM 127
VP SV +A T +V T D S+ +K +G ++DVR EID D
Sbjct: 210 VPTETSVQVAAATSRSVDEVFTNPYQKDAPLTATLSINQKITGRNSEKDVRHLEIDLGDS 269
Query: 128 HLSFRPGD 135
LS++PGD
Sbjct: 270 GLSYQPGD 277
>gi|20093500|ref|NP_613347.1| exosome complex RNA-binding protein Csl4 [Methanopyrus kandleri
AV19]
gi|19886332|gb|AAM01277.1| Predicted RNA-binding protein (consists of S1 domain and a
Zn-ribbon domain) [Methanopyrus kandleri AV19]
Length = 196
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 16/161 (9%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
V PG+ + A G G Y + G+V A++TG + ++R V V +
Sbjct: 10 FVLPGDKITVAEAFYPGPGTY--EDGGVVRAAITGRVEV------DLEER-EVRVEPYVD 60
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFS---GIIRQQDVRATEIDKVD 126
P + G+ VI RV V ++ I V ++ RE + G I VR ++ D
Sbjct: 61 TPPKLKRGASVIGRVQSVKEQVVLVKICFVDDRTDREPPTSGVGGIHISKVRDAYVE--D 118
Query: 127 MHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAEST 167
+ F+PGDIVRA V+S LST + GVV A T
Sbjct: 119 LADEFQPGDIVRARVVST--KMPVQLSTVGKEYGVVLAYCT 157
>gi|261328052|emb|CBH11029.1| Csl4p homologue, putative [Trypanosoma brucei gambiense DAL972]
Length = 309
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 111 IIRQQDVRATEIDKVDMHL-----SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
+IR +D+R + K + +F+ GD+V A+VLS D R Y LST GVV A
Sbjct: 207 VIRMEDIRPFKPRKDQLSPPPPADAFQDGDVVVATVLSQSDVRQYQLSTVAEHCGVVEA 265
>gi|303389018|ref|XP_003072742.1| hypothetical protein Eint_040930 [Encephalitozoon intestinalis ATCC
50506]
gi|303301884|gb|ADM11382.1| hypothetical protein Eint_040930 [Encephalitozoon intestinalis ATCC
50506]
Length = 100
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 41/102 (40%), Gaps = 12/102 (11%)
Query: 52 PPDSPDQRPTVEVTGHKAHGPV-PEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSG 110
P D D + GH A G + PE GS ARV KV I V + ++ G
Sbjct: 5 PGDGAD---VLTCNGHPAIGTIFPEIGSKGKARVIKVTFTQMIVQIFEVEGRKTAIEYRG 61
Query: 111 IIRQQDVRATEIDKVDMHLS--FRPGDIVRASVLSLGDARAY 150
I R D E HL F GD V +VLS GD +
Sbjct: 62 IFRPVDFNPNE------HLCDRFAKGDTVECTVLSYGDNGVF 97
>gi|330012242|ref|ZP_08307337.1| sulfite reductase flavoprotein, alpha-component [Klebsiella sp. MS
92-3]
gi|328533882|gb|EGF60551.1| sulfite reductase flavoprotein, alpha-component [Klebsiella sp. MS
92-3]
Length = 599
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPGSVVIA-RVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V KA PV P + + V + T + + SV +K +G ++DVR EI
Sbjct: 202 VEALKARAPVAAPAQLATSGAVNDIHTSPYTKEAPLTATLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|152971641|ref|YP_001336750.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238896237|ref|YP_002920973.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|386036257|ref|YP_005956170.1| sulfite reductase subunit alpha [Klebsiella pneumoniae KCTC 2242]
gi|402779262|ref|YP_006634808.1| sulfite reductase flavoprotein alpha-component [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|419972578|ref|ZP_14488006.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419980256|ref|ZP_14495542.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419991215|ref|ZP_14506182.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419997344|ref|ZP_14512141.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420001143|ref|ZP_14515800.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420008179|ref|ZP_14522670.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420013706|ref|ZP_14528016.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420019370|ref|ZP_14533563.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420024861|ref|ZP_14538872.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420035577|ref|ZP_14549240.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420042443|ref|ZP_14555936.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420048133|ref|ZP_14561448.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420053204|ref|ZP_14566383.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420058696|ref|ZP_14571707.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420065391|ref|ZP_14578197.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420073215|ref|ZP_14585844.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420075597|ref|ZP_14588072.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420081449|ref|ZP_14593757.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|424832100|ref|ZP_18256828.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|424932067|ref|ZP_18350439.1| Sulfite reductase NADPH flavoprotein alpha-component (SiR-FP)
[Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|425093023|ref|ZP_18496107.1| sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|428940422|ref|ZP_19013506.1| sulfite reductase subunit alpha [Klebsiella pneumoniae VA360]
gi|189082750|sp|A6TD49.1|CYSJ_KLEP7 RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|110180265|gb|ABG54374.1| sulfite reductase subunit II [Klebsiella pneumoniae]
gi|150956490|gb|ABR78520.1| sulfite reductase (NADPH), flavoprotein beta subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|238548555|dbj|BAH64906.1| sulfite reductase (NADPH) flavoprotein beta subunit [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|339763385|gb|AEJ99605.1| sulfite reductase subunit alpha [Klebsiella pneumoniae KCTC 2242]
gi|397346567|gb|EJJ39681.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397350987|gb|EJJ44073.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397363137|gb|EJJ55780.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397364564|gb|EJJ57194.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397372668|gb|EJJ65152.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397379789|gb|EJJ71980.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397383740|gb|EJJ75874.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397389062|gb|EJJ81012.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397398164|gb|EJJ89829.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397407594|gb|EJJ98979.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397416077|gb|EJK07256.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397416245|gb|EJK07420.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397424621|gb|EJK15519.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397431828|gb|EJK22499.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397436534|gb|EJK27120.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397438191|gb|EJK28709.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397448096|gb|EJK38275.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397453214|gb|EJK43276.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402540204|gb|AFQ64353.1| Sulfite reductase flavoprotein alpha-component [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|405611365|gb|EKB84133.1| sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|407806254|gb|EKF77505.1| Sulfite reductase NADPH flavoprotein alpha-component (SiR-FP)
[Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|414709539|emb|CCN31243.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|426302299|gb|EKV64506.1| sulfite reductase subunit alpha [Klebsiella pneumoniae VA360]
Length = 599
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPGSVVIA-RVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V KA PV P + + V + T + + SV +K +G ++DVR EI
Sbjct: 202 VEALKARAPVAAPAQLATSGAVNDIHTSPYTKEAPLTATLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|425075201|ref|ZP_18478304.1| sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425085837|ref|ZP_18488930.1| sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|449047531|ref|ZP_21730824.1| sulfite reductase subunit alpha [Klebsiella pneumoniae hvKP1]
gi|405595404|gb|EKB68794.1| sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405606346|gb|EKB79338.1| sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|448877396|gb|EMB12362.1| sulfite reductase subunit alpha [Klebsiella pneumoniae hvKP1]
Length = 599
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPGSVVIA-RVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V KA PV P + + V + T + + SV +K +G ++DVR EI
Sbjct: 202 VEALKARAPVAAPAQLATSGAVNDIHTSPYTKEAPLTATLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|378980353|ref|YP_005228494.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|421909829|ref|ZP_16339632.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421914510|ref|ZP_16344157.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|428148598|ref|ZP_18996461.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|364519764|gb|AEW62892.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|410116229|emb|CCM82257.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410123266|emb|CCM86782.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|427541439|emb|CCM92599.1| Sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
Length = 590
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPGSVVIA-RVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V KA PV P + + V + T + + SV +K +G ++DVR EI
Sbjct: 193 VEALKARAPVAAPAQLATSGAVNDIHTSPYTKEAPLTATLSVNQKITGRNSEKDVRHIEI 252
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 253 DLGDSGLRYQPGD 265
>gi|262041517|ref|ZP_06014714.1| sulfite reductase flavoprotein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041078|gb|EEW42152.1| sulfite reductase flavoprotein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 599
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPGSVVIA-RVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V KA PV P + + V + T + + SV +K +G ++DVR EI
Sbjct: 202 VEALKARAPVAAPAQLATSGAVNDIHTSPYTKEAPLTATLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|327401580|ref|YP_004342419.1| RNA-binding domain, S1 [Archaeoglobus veneficus SNP6]
gi|327317088|gb|AEA47704.1| RNA-binding domain, S1 [Archaeoglobus veneficus SNP6]
Length = 182
Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 35/167 (20%)
Query: 8 MVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLL----RTLSPPPDSPDQRPTVE 63
M V PG+ +G E G G Y + NG ++A++ G + RT+S P
Sbjct: 3 MKFVMPGDRIGLVEEYVTGSGVY--EENGEIFAAVAGKVVVKDRTVSVEP---------- 50
Query: 64 VTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEID 123
P G VV+ RV V MA ++ + ++ F + + A +
Sbjct: 51 ----VKRIPHINKGDVVLGRVVDVRNSMALIEL------ARKKGFDRSLMHTGIAALHVS 100
Query: 124 KV------DMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
V D++ + R DI++A V+ DA LST + ++GV+ +
Sbjct: 101 NVQRDYLKDINEAIRYMDIIKARVI---DAENLKLSTKEPEMGVLKS 144
>gi|419764452|ref|ZP_14290692.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|425082925|ref|ZP_18486022.1| sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|428932782|ref|ZP_19006352.1| sulfite reductase subunit alpha [Klebsiella pneumoniae JHCK1]
gi|397743035|gb|EJK90253.1| sulfite reductase subunit alpha [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|405599244|gb|EKB72420.1| sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|426306771|gb|EKV68867.1| sulfite reductase subunit alpha [Klebsiella pneumoniae JHCK1]
Length = 599
Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPGSVVIA-RVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V KA PV P + + V + T + + SV +K +G ++DVR EI
Sbjct: 202 VEALKARAPVAAPAQLATSGAVNDIHTSPYTKEAPLTATLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|365140191|ref|ZP_09346246.1| sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
sp. 4_1_44FAA]
gi|363653507|gb|EHL92456.1| sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
sp. 4_1_44FAA]
Length = 599
Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 64 VTGHKAHGPVPEPGSVVIA-RVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEI 122
V KA PV P + + V + T + + SV +K +G ++DVR EI
Sbjct: 202 VEALKARAPVAAPAQLATSGAVNDIHTSPYTKEAPLTATLSVNQKITGRNSEKDVRHIEI 261
Query: 123 DKVDMHLSFRPGD 135
D D L ++PGD
Sbjct: 262 DLGDSGLRYQPGD 274
>gi|161501998|ref|YP_001569110.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|189082752|sp|A9MF16.1|CYSJ_SALAR RecName: Full=Sulfite reductase [NADPH] flavoprotein
alpha-component; Short=SiR-FP
gi|160863345|gb|ABX19968.1| hypothetical protein SARI_00014 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 599
Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEP-GSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SVV V ++ T + + + SV +K +G ++DVR EID D
Sbjct: 206 KSRTPVTTPVPSVVSGAVNEIHTSPYTKEAPLRASLSVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLCYQPGD 274
>gi|14250899|emb|CAC39254.1| Csl4p homologue [Trypanosoma brucei]
Length = 309
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 111 IIRQQDVRATEIDKVDMHL-----SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
+IR +D+R + K + +F+ GD+V A+VLS D R Y LST GVV A
Sbjct: 207 VIRMEDIRPFKPRKDQLTPPPPADAFQDGDVVVATVLSQSDVRQYQLSTVAEHCGVVEA 265
>gi|328875590|gb|EGG23954.1| Exosome complex exonuclease RRP4 [Dictyostelium fasciculatum]
Length = 379
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 45/180 (25%)
Query: 4 KEEEMV-------------LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLS 50
KEEEM LVTPG + K E G G + H G + AS++G++
Sbjct: 56 KEEEMYDDENDPKTQFARNLVTPGTTISKEGEYLKGHGTF--HHQGSLIASVSGVV---- 109
Query: 51 PPPDSPDQRPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKF-- 108
D D+ +V + G E G +++ R+T+V + D C + R+ +
Sbjct: 110 ---DKVDKLVSVRAFHSRYQG---EIGDIIVGRITQVAAKRWKVD--C----NARQDYIL 157
Query: 109 --------SGIIRQQDVRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLG 160
GI R R T D++ M F D++ A V ++ + L T G
Sbjct: 158 MLTAINLPGGIQR----RRTSSDELQMRNFFVENDLIYAEVQAINGDGSVALHTRNQRYG 213
>gi|72388998|ref|XP_844794.1| exosome component CSL4 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176357|gb|AAX70469.1| exosome component CSL4 [Trypanosoma brucei]
gi|70801328|gb|AAZ11235.1| exosome component CSL4 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 309
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 111 IIRQQDVRATEIDKVDMHL-----SFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
+IR +D+R + K + +F+ GD+V A+VLS D R Y LST GVV A
Sbjct: 207 VIRMEDIRPFKPRKDQLTPPPPADAFQDGDVVVATVLSQSDVRQYQLSTVAEHCGVVEA 265
>gi|170766152|ref|ZP_02900963.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia albertii TW07627]
gi|170125298|gb|EDS94229.1| sulfite reductase [NADPH] flavoprotein, alpha-component
[Escherichia albertii TW07627]
Length = 600
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 68 KAHGPVPEPGSVVI--ARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKV 125
K+ PV V A V ++ T S D + SV +K +G ++DVR EID
Sbjct: 206 KSRAPVTASSQSVATGAAVNEIHTSPYSKDAPLAASLSVNQKITGRNSEKDVRHIEIDLG 265
Query: 126 DMHLSFRPGD 135
D L ++PGD
Sbjct: 266 DSGLRYQPGD 275
>gi|407867724|gb|EKG08638.1| exosome component CSL4, putative [Trypanosoma cruzi]
Length = 239
Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 14/95 (14%)
Query: 74 PEPGSVVIARVTKVMTRMASADIMCVG---------AKSVREKFSGIIRQQDVR-----A 119
P G V RV +V A +I+ V + + F G++R +D+R
Sbjct: 110 PRLGDTVYMRVVRVSRAFAYGEIIAVNGVWCSNSSVSVGLAGSFRGVVRVEDIRPFKPTK 169
Query: 120 TEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLST 154
++ +F GD+V A+VLS D R Y LST
Sbjct: 170 DQLTPPPPAAAFHAGDVVMATVLSQSDVRQYQLST 204
>gi|320100248|ref|YP_004175840.1| RNA-binding protein (consists of S1 domain and a Zn-ribbon domain)
[Desulfurococcus mucosus DSM 2162]
gi|319752600|gb|ADV64358.1| RNA-binding protein (consists of S1 domain and a Zn-ribbon domain)
[Desulfurococcus mucosus DSM 2162]
Length = 183
Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQ-RPTVEVTGHK 68
+V PGE L E +GAY+ G +R+L D+ R V V K
Sbjct: 6 VVVPGEPLAVEEEAIPVQGAYLDSR---------GFIRSLVFGLKVFDKYRKQVYVKQVK 56
Query: 69 AHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKV-DM 127
G V +PGSVV A V V +A I V + + SG++ + + D+
Sbjct: 57 TTGFV-KPGSVVEAYVEAVSDDIAFLRIYSVEGQGMSA--SGVLHVSQASNGFVQSLLDV 113
Query: 128 HLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSAE-STAGKLVY 173
RPGD V+A VL+ ++ Y L+ + DLGVV A S G L+Y
Sbjct: 114 ---VRPGDYVKAKVLN--NSIPYQLTLKEPDLGVVEAYCSVCGGLLY 155
>gi|302348993|ref|YP_003816631.1| Exosome complex RNA-binding like-protein Cs14 [Acidilobus
saccharovorans 345-15]
gi|302329405|gb|ADL19600.1| Exosome complex RNA-binding like-protein Cs14 [Acidilobus
saccharovorans 345-15]
Length = 201
Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 22/163 (13%)
Query: 11 VTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKAH 70
+ PG+V+ E G+ YV G++ + G L+ D+ ++ V + +
Sbjct: 1 MVPGDVVAVEEEYSEGQNVYVDYDTGVLRVASVGKLKL-----DNINKVAEV-IPARRLK 54
Query: 71 GPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREK--------FSGIIRQQDVRATEI 122
P+ G+ V+ VT+V +A DI A R G+I V A
Sbjct: 55 S--PKKGATVLGLVTQVRENLAFVDIYGEVALEPRPGRFIEYSGVLDGVITPDSVGA--- 109
Query: 123 DKVDMHLSF-RPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
D+VD ++F RP DI+ A V+S Y LS LGV+ A
Sbjct: 110 DRVDDVMNFVRPNDIILARVMS--TISPYLLSLKGPQLGVIYA 150
>gi|168235989|ref|ZP_02661047.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|194736260|ref|YP_002115897.1| sulfite reductase subunit alpha [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194711762|gb|ACF90983.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197290800|gb|EDY30154.1| sulfite reductase [NADPH] flavoprotein, alpha-component [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
Length = 599
Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D +V +K +G ++DVR EID D
Sbjct: 206 KSRVPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRNSEKDVRHIEIDLGD 265
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 266 SGLRYQPGD 274
>gi|281206417|gb|EFA80604.1| Exosome complex exonuclease [Polysphondylium pallidum PN500]
Length = 392
Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 32/161 (19%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
L+TPG+ + + E G G + + N + AS+ GL+ + D+ +V +
Sbjct: 71 LMTPGQTISREGEFLRGHGTFHS--NNALLASVCGLVERV-------DKLVSVRPFKARY 121
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKF----------SGIIRQQDVRA 119
HG E G +V+ R+T+V ++ D+ + R+ + GI R R
Sbjct: 122 HG---EIGDIVVGRITQVGSKRWKVDV------AARQDYILMLTAINLPGGIQR----RR 168
Query: 120 TEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLG 160
T D++ M F D+V A V ++ + L T G
Sbjct: 169 TSSDELQMRNFFVENDLVYAEVQAINQDGSVALHTRNQRYG 209
>gi|222444526|ref|ZP_03607041.1| hypothetical protein METSMIALI_00138 [Methanobrevibacter smithii
DSM 2375]
gi|261350935|ref|ZP_05976352.1| putative exosome complex RNA-binding protein 1 [Methanobrevibacter
smithii DSM 2374]
gi|222434091|gb|EEE41256.1| KH domain protein [Methanobrevibacter smithii DSM 2375]
gi|288860273|gb|EFC92571.1| putative exosome complex RNA-binding protein 1 [Methanobrevibacter
smithii DSM 2374]
Length = 298
Score = 36.6 bits (83), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 23/132 (17%)
Query: 6 EEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVT 65
E LV PGEVL E +G+G + K NG + +SL GL+ + + V
Sbjct: 5 ENKDLVIPGEVLA-DDEYYSGRGTF--KENGKICSSLMGLVSL---------RNKKIRVI 52
Query: 66 GHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKV 125
K+ VP+ G VVI ++ V M DI +SGI+ +V E K
Sbjct: 53 PLKSK-YVPKKGDVVIGKIKDVRFSMWDVDI--------NSPYSGILPAFEVFGRE--KK 101
Query: 126 DMHLSFRPGDIV 137
+++ F GD++
Sbjct: 102 ELNKVFDVGDVL 113
>gi|417351791|ref|ZP_12129289.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Gaminara str. A4-567]
gi|353568066|gb|EHC33072.1| Sulfite reductase NADPH flavoprotein alpha-component [Salmonella
enterica subsp. enterica serovar Gaminara str. A4-567]
Length = 590
Score = 36.6 bits (83), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P SV V + T + D +V +K +G ++DVR EID D
Sbjct: 197 KSRVPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRNSEKDVRHIEIDLGD 256
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 257 SGLRYQPGD 265
>gi|50309037|ref|XP_454524.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643659|emb|CAG99611.1| KLLA0E12739p [Kluyveromyces lactis]
Length = 437
Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 34/153 (22%)
Query: 3 VKEEEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLL----RTLSPPPDSPDQ 58
+ ++ +VTPGE++ G G Y ++ Y+S+ G + R LS P
Sbjct: 129 IDHQDGSIVTPGELITDDPIWMKGHGTYFLENK--TYSSVVGTVSRVNRLLSVLPLKSRY 186
Query: 59 RPTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKF-------SGI 111
+PE G ++ R+T V R DI GAK G+
Sbjct: 187 --------------IPETGDHIVGRITDVGNRRWKVDI---GAKQYAVLMLGSVNLPGGV 229
Query: 112 IRQQDVRATEIDKVDMHLSFRPGDIVRASVLSL 144
+R R +E D++ M + GD++ A V SL
Sbjct: 230 LR----RKSETDELQMRNFLKEGDLLNAEVQSL 258
>gi|148642303|ref|YP_001272816.1| exosome complex RNA-binding protein Rrp4 [Methanobrevibacter
smithii ATCC 35061]
gi|166919579|sp|A5UJS0.1|ECR1_METS3 RecName: Full=Probable exosome complex RNA-binding protein 1
gi|148551320|gb|ABQ86448.1| RNA-binding protein Rrp4 [Methanobrevibacter smithii ATCC 35061]
Length = 298
Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 23/132 (17%)
Query: 6 EEMVLVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVT 65
E LV PGEVL E +G+G + K NG + +SL GL+ + + V
Sbjct: 5 ENKDLVIPGEVLA-DDEYYSGRGTF--KENGKICSSLMGLVSL---------RNKKIRVI 52
Query: 66 GHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKV 125
K+ VP+ G VVI ++ V M DI +SGI+ +V E K
Sbjct: 53 PLKSK-YVPKKGDVVIGKIKDVRFSMWDVDI--------NSPYSGILPAFEVFGRE--KK 101
Query: 126 DMHLSFRPGDIV 137
+++ F GD++
Sbjct: 102 ELNKVFDVGDVL 113
>gi|19113896|ref|NP_592984.1| exosome subunit Rrp4 (predicted) [Schizosaccharomyces pombe 972h-]
gi|1175376|sp|Q09704.1|RRP4_SCHPO RecName: Full=Exosome complex component rrp4; AltName:
Full=Ribosomal RNA-processing protein 4
gi|1052797|emb|CAA90501.1| exosome subunit Rrp4 (predicted) [Schizosaccharomyces pombe]
Length = 329
Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 26/139 (18%)
Query: 10 LVTPGEVLGKATEVKAGKGAYVAKHNGLVYASLTGLLRTLSPPPDSPDQRPTVEVTGHKA 69
LVTPG+++ + G G Y +G +YAS+ G ++ ++ R
Sbjct: 57 LVTPGQLVTDDPQFMRGHGTYF--EDGGIYASVAGSVQRVNKLISVKPLRSKY------- 107
Query: 70 HGPVPEPGSVVIARVTKVMTRMASADIMCVGAK-------SVREKFSGIIRQQDVRATEI 122
VPE G ++I ++ +V + DI GAK S GI R R E
Sbjct: 108 ---VPEIGDLIIGKIAEVQPKRWKVDI---GAKQNAVLMLSSINLPGGIQR----RKLET 157
Query: 123 DKVDMHLSFRPGDIVRASV 141
D++ M F+ GD++ A V
Sbjct: 158 DELQMRSFFQEGDLLVAEV 176
>gi|423115948|ref|ZP_17103639.1| sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
oxytoca 10-5245]
gi|376379360|gb|EHS92113.1| sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
oxytoca 10-5245]
Length = 582
Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPGSVVIA-RVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
KA P P +V + V ++ T + + +V +K +G ++DVR EID D
Sbjct: 189 KARAPAASPSQLVTSGAVNEIHTSPYTKEAPLTATLAVNQKITGRDSEKDVRHIEIDLGD 248
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 249 SGLRYQPGD 257
>gi|440286397|ref|YP_007339162.1| sulfite reductase (NADPH) flavoprotein, alpha-component
[Enterobacteriaceae bacterium strain FGI 57]
gi|440045919|gb|AGB76977.1| sulfite reductase (NADPH) flavoprotein, alpha-component
[Enterobacteriaceae bacterium strain FGI 57]
Length = 600
Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPG-SVVIARVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
K+ PV P +V V ++ T S + + SV +K + ++DVR EID D
Sbjct: 207 KSRAPVAAPSQAVATGAVNEIYTSPYSKEAPLTASLSVNQKITSRDSEKDVRHIEIDLGD 266
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 267 SGLRYQPGD 275
>gi|423109987|ref|ZP_17097682.1| sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
oxytoca 10-5243]
gi|376380529|gb|EHS93274.1| sulfite reductase [NADPH] flavoprotein alpha-component [Klebsiella
oxytoca 10-5243]
Length = 582
Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 68 KAHGPVPEPGSVVIA-RVTKVMTRMASADIMCVGAKSVREKFSGIIRQQDVRATEIDKVD 126
KA P P +V + V ++ T + + +V +K +G ++DVR EID D
Sbjct: 189 KARAPAASPSQLVTSGAVNEIHTSPYTKEAPLTATLAVNQKITGRDSEKDVRHIEIDLGD 248
Query: 127 MHLSFRPGD 135
L ++PGD
Sbjct: 249 SGLRYQPGD 257
>gi|410671313|ref|YP_006923684.1| Exosome subunit Csl4 [Methanolobus psychrophilus R15]
gi|409170441|gb|AFV24316.1| Exosome subunit Csl4 [Methanolobus psychrophilus R15]
Length = 189
Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 29/168 (17%)
Query: 6 EEMVLVTPGEVLGKATEVKAGKGAYV------AKHNGLVYASLTGLLRTLSPPPDSPDQR 59
+E V V PG+++G E AG+G Y+ + G V+ + ++ P +P
Sbjct: 4 KESVFVMPGDLVGTTEEFTAGEGTYIDVGDIHSIGTGYVHIDRNSRVISVLPKTKTP--- 60
Query: 60 PTVEVTGHKAHGPVPEPGSVVIARVTKVMTRMASADIMCVGAKSVRE-KFSG--IIRQQD 116
P G +V+ V + + I + K RE + G I +
Sbjct: 61 ------------PQLTEGDIVVGSVVNIRESVVLVAIGAIRGKGEREFQMDGPAAIHVSN 108
Query: 117 VRATEIDKVDMHLSFRPGDIVRASVLSLGDARAYFLSTAKNDLGVVSA 164
VR + + + F DIV+A V++ + R LSTA+ LGV+ A
Sbjct: 109 VRDSFVKSLSQE--FAMSDIVKAKVINTQNMR---LSTAEASLGVMRA 151
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,081,576,686
Number of Sequences: 23463169
Number of extensions: 118981681
Number of successful extensions: 375547
Number of sequences better than 100.0: 704
Number of HSP's better than 100.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 190
Number of HSP's that attempted gapping in prelim test: 374688
Number of HSP's gapped (non-prelim): 759
length of query: 210
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 74
effective length of database: 9,168,204,383
effective search space: 678447124342
effective search space used: 678447124342
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 73 (32.7 bits)