BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028349
MDPRLCNGEYFHLILFSSFVILQLIMILIFFQTVEEEVYEAHKNELEPTLAKRAEHYFTE
NRRVAKGIAFLTWSFEIILEIHVYLVLCFINLWIYFIGSGLEAWKSGNSQDFGKLISASG
LSSIYNYECGSEPLIQLNEILQRAPGVFGARFSGAGFRGCCLALVDADRAEEAASYVRSE
YFELQPELASQLNADSAVLICKPGDCARVI

High Scoring Gene Products

Symbol, full name Information P value
GalAK
AT3G10700 		protein from Arabidopsis thaliana 8.5e-43

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028349
        (210 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2075730 - symbol:GalAK "galacturonic acid kina...   332  8.5e-43   2


>TAIR|locus:2075730 [details] [associations]
            symbol:GalAK "galacturonic acid kinase" species:3702
            "Arabidopsis thaliana" [GO:0004335 "galactokinase activity"
            evidence=IEA;ISS;IDA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
            [GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006012 "galactose
            metabolic process" evidence=IEA] [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
            [GO:0016773 "phosphotransferase activity, alcohol group as
            acceptor" evidence=IEA] [GO:0046835 "carbohydrate phosphorylation"
            evidence=IEA;IDA] [GO:0046396 "D-galacturonate metabolic process"
            evidence=IDA] [GO:0047912 "galacturonokinase activity"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR000705 InterPro:IPR006204 InterPro:IPR006206
            Pfam:PF00288 PIRSF:PIRSF000530 PRINTS:PR00473 PRINTS:PR00959
            PROSITE:PS00627 GO:GO:0005829 GO:GO:0005524 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0046872 EMBL:AC011560 EMBL:AC011708
            GO:GO:0006012 eggNOG:COG0153 Gene3D:3.30.230.10 InterPro:IPR020568
            InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR013750 Pfam:PF08544
            KO:K00849 EMBL:FJ439676 EMBL:AY072103 EMBL:AY096732 IPI:IPI00522983
            RefSeq:NP_187681.2 UniGene:At.39881 HSSP:Q9R7D7
            ProteinModelPortal:Q8VYG2 SMR:Q8VYG2 STRING:Q8VYG2 PaxDb:Q8VYG2
            PRIDE:Q8VYG2 EnsemblPlants:AT3G10700.1 GeneID:820239
            KEGG:ath:AT3G10700 TAIR:At3g10700 HOGENOM:HOG000083795
            InParanoid:Q8VYG2 OMA:VRECHDA PhylomeDB:Q8VYG2 ProtClustDB:PLN02865
            Genevestigator:Q8VYG2 GO:GO:0047912 GO:GO:0046835 GO:GO:0046396
            Uniprot:Q8VYG2
        Length = 424

 Score = 332 (121.9 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
 Identities = 66/111 (59%), Positives = 78/111 (70%)

Query:   100 GLEAWKSGNSQDFGKLISASGLSSIYNYECGSEPLIQLNEILQRAPXXXXXXXXXXXXXX 159
             G EAW SGN ++FGKLISASGLSSI NYECG+EPLIQL +IL +AP              
Sbjct:   313 GREAWASGNLEEFGKLISASGLSSIENYECGAEPLIQLYKILLKAPGVYGARFSGAGFRG 372

Query:   160 CCLALVDADRAEEAASYVRSEYFELQPELASQLNADSAVLICKPGDCARVI 210
             CCLA VDA++AE AASYV+ EY + QPE A+ LN    VLIC+ GD ARV+
Sbjct:   373 CCLAFVDAEKAEAAASYVKDEYEKAQPEFANNLNGGKPVLICEAGDAARVL 423

 Score = 137 (53.3 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
 Identities = 26/34 (76%), Positives = 29/34 (85%)

Query:    34 VEEEVYEAHKNELEPTLAKRAEHYFTENRRVAKG 67
             VE  VYEAHK+EL+P LAKRAEHYF+EN RV KG
Sbjct:   280 VEHAVYEAHKHELKPVLAKRAEHYFSENMRVIKG 313


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      210       184   0.00078  110 3  11 22  0.40    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  611 (65 KB)
  Total size of DFA:  177 KB (2103 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.85u 0.14s 14.99t   Elapsed:  00:00:00
  Total cpu time:  14.85u 0.14s 14.99t   Elapsed:  00:00:00
  Start:  Fri May 10 15:35:31 2013   End:  Fri May 10 15:35:31 2013

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