BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028350
(210 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255539324|ref|XP_002510727.1| conserved hypothetical protein [Ricinus communis]
gi|223551428|gb|EEF52914.1| conserved hypothetical protein [Ricinus communis]
Length = 264
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 143/192 (74%), Gaps = 11/192 (5%)
Query: 15 SPLHTWSQRPHHASFTAFSNNKGTNQYKKQFVFCCKKQEQEDDAR--TLNRFRIEEQDDD 72
+PLH +P+ +F + S + N +KQ + CC ++D RFR++E
Sbjct: 20 TPLHLL--KPN-LNFLSASPSFRFNSCRKQHLPCCTNSFPDEDQHQPLFCRFRLQEP--- 73
Query: 73 SRTKRREVMFQLAFT-ACSFPAIVSYALAANEDLRVYTDELNKFEISIPQDWQLGAGEPN 131
RRE +F +AFT +FP ++S A A +D R+YTD+ NKF+ISIPQDW++GAGEPN
Sbjct: 74 --YGRREALFSVAFTTGFTFPGLISNAFAEIDDFRLYTDDANKFQISIPQDWRVGAGEPN 131
Query: 132 GFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVA 191
GFKS+TAFYP+EAS SSVSVVITGLGPDFTRMESFGKVEAFA+TLVSGLDRSW+RPPGVA
Sbjct: 132 GFKSVTAFYPEEASGSSVSVVITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQRPPGVA 191
Query: 192 AKLIDCKASKGI 203
AKLIDCKA+KGI
Sbjct: 192 AKLIDCKATKGI 203
>gi|224083366|ref|XP_002306998.1| predicted protein [Populus trichocarpa]
gi|222856447|gb|EEE93994.1| predicted protein [Populus trichocarpa]
Length = 193
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 121/140 (86%), Gaps = 4/140 (2%)
Query: 75 TKRREVMFQLAFTACSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAGEPN 131
TKRRE +F + FTA +FPAI S ALAA ED RVYTD+ NKF+ISIPQ WQ+GAGEP+
Sbjct: 2 TKRREALFNMVFTAFTFPAIASTALAATGVAEDSRVYTDDANKFKISIPQGWQVGAGEPS 61
Query: 132 GFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVA 191
G+KS+TAFYP+EAS+SSVSVVITGLGPDFTR+ESFGKV+AFA+TLV GLDRSW+RPPGVA
Sbjct: 62 GYKSVTAFYPEEASNSSVSVVITGLGPDFTRLESFGKVDAFAETLVGGLDRSWQRPPGVA 121
Query: 192 AKLIDCKASKGI-CIFFSIQ 210
AKLID KA+ G+ I +++Q
Sbjct: 122 AKLIDSKAANGLYYIEYTLQ 141
>gi|147809819|emb|CAN64877.1| hypothetical protein VITISV_030793 [Vitis vinifera]
Length = 247
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 144/208 (69%), Gaps = 20/208 (9%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKGTNQY-----KKQFVFCCKKQEQEDDARTLNRFR 65
MA PL R F+A+S+ KG KKQ V CK + +E++ + F
Sbjct: 1 MALYFPLPL---RSGSCDFSAYSSKKGCGSRTGKCGKKQRVVFCKNENKEEEKTS---FG 54
Query: 66 IEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALA---ANEDLRVYTDELNKFEISIPQD 122
I+EQ R REV+ Q+ F+ S AIV ALA ED +VY+DE+NKF+I IPQD
Sbjct: 55 IKEQHGGGR---REVVLQIVFSTISLQAIVPNALADTEVPEDFKVYSDEVNKFKIQIPQD 111
Query: 123 WQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDR 182
WQ+G+GEP+GFKS+TAFYP+EAS S+VSVVITGLG DFTR+ESFGKV+AFA+ LV+GLDR
Sbjct: 112 WQVGSGEPSGFKSVTAFYPEEASGSNVSVVITGLGADFTRLESFGKVDAFAENLVNGLDR 171
Query: 183 SWRRPPGVAAKLIDCKASKGICIFFSIQ 210
SW+RPPG+AAKLIDC+A+ G F+ I+
Sbjct: 172 SWQRPPGIAAKLIDCRAANG---FYYIE 196
>gi|225457650|ref|XP_002273332.1| PREDICTED: psbP domain-containing protein 3, chloroplastic [Vitis
vinifera]
gi|297745601|emb|CBI40766.3| unnamed protein product [Vitis vinifera]
Length = 253
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 144/208 (69%), Gaps = 20/208 (9%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKGTNQY-----KKQFVFCCKKQEQEDDARTLNRFR 65
MA PL R F+A+S+ KG KKQ V CK + +E++ + F
Sbjct: 1 MALYFPLPL---RSGSCDFSAYSSKKGYGSRTGKCGKKQRVVFCKNENKEEEKTS---FG 54
Query: 66 IEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALA---ANEDLRVYTDELNKFEISIPQD 122
I+EQ R REV+ Q+ F+ S AIV ALA ED +VY+DE+NKF+I IPQD
Sbjct: 55 IKEQHGGGR---REVVLQMVFSTISLQAIVPNALADTEVPEDFKVYSDEVNKFKIQIPQD 111
Query: 123 WQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDR 182
WQ+G+GEP+GFKS+TAFYP+EAS S+VSVVITGLG DFTR+ESFGKV+AFA+ LV+GLDR
Sbjct: 112 WQVGSGEPSGFKSVTAFYPEEASGSNVSVVITGLGADFTRLESFGKVDAFAENLVNGLDR 171
Query: 183 SWRRPPGVAAKLIDCKASKGICIFFSIQ 210
SW+RPPG+AAKLIDC+A+ G F+ I+
Sbjct: 172 SWQRPPGIAAKLIDCRAANG---FYYIE 196
>gi|449458059|ref|XP_004146765.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Cucumis sativus]
Length = 257
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/135 (71%), Positives = 111/135 (82%), Gaps = 4/135 (2%)
Query: 73 SRTKRREVMFQLAFTACSFPAIVSYALAAN----EDLRVYTDELNKFEISIPQDWQLGAG 128
S RRE+M + FTA SF + S ALA + ED R YTDE NKF + IPQDWQ+G G
Sbjct: 62 SGVNRREIMLGIGFTAFSFQEVGSNALAESVVVAEDYRTYTDEANKFSLVIPQDWQVGNG 121
Query: 129 EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPP 188
EPNGFKS+TAF+PQE S+S+VSVVI+GLGPD+TRMESFGKVE FADTLVSGLDRSW+RPP
Sbjct: 122 EPNGFKSVTAFFPQETSTSNVSVVISGLGPDYTRMESFGKVEEFADTLVSGLDRSWKRPP 181
Query: 189 GVAAKLIDCKASKGI 203
GVAAKLIDC++SKGI
Sbjct: 182 GVAAKLIDCRSSKGI 196
>gi|449522159|ref|XP_004168095.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Cucumis sativus]
Length = 188
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/127 (73%), Positives = 107/127 (84%), Gaps = 4/127 (3%)
Query: 81 MFQLAFTACSFPAIVSYALAAN----EDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSI 136
M + FTA SF +VS ALA + ED R YTDE NKF + IPQDWQ+G GEPNGFKS+
Sbjct: 1 MLGIGFTAFSFQEVVSNALAESVVVAEDYRTYTDEANKFSLVIPQDWQVGNGEPNGFKSV 60
Query: 137 TAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLID 196
TAF+PQE S+S+VSVVI+GLGPD+TRMESFGKVE FADTLVSGLDRSW+RPPGVAAKLID
Sbjct: 61 TAFFPQETSTSNVSVVISGLGPDYTRMESFGKVEEFADTLVSGLDRSWKRPPGVAAKLID 120
Query: 197 CKASKGI 203
C++SKGI
Sbjct: 121 CRSSKGI 127
>gi|188509930|gb|ACD56619.1| unknown predicted protein [Gossypioides kirkii]
Length = 274
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/153 (66%), Positives = 119/153 (77%), Gaps = 12/153 (7%)
Query: 67 EEQDDDSR---TKRREVMFQLAFTACSFP-AIVSYALAANE-----DLRVYTDELNKFEI 117
E ++DD T+RR+ + Q A SFP I+S A+A E D RVYTDE NKF+I
Sbjct: 46 EMKEDDGHATSTRRRQFILQAPLIAFSFPQLIMSTAIAVAEIDVPQDFRVYTDEQNKFKI 105
Query: 118 SIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLV 177
IPQDWQ+GAGEPN FKSITAFYP+E ++S+VSV ITGLGPDFTRMESFGKV+AFADTLV
Sbjct: 106 FIPQDWQVGAGEPNNFKSITAFYPEEEANSNVSVAITGLGPDFTRMESFGKVDAFADTLV 165
Query: 178 SGLDRSWRRPPGVAAKLIDCKASKGICIFFSIQ 210
SGLDRSW+RPPGVAAKLIDCKA+ G F+ I+
Sbjct: 166 SGLDRSWQRPPGVAAKLIDCKAANG---FYYIE 195
>gi|21537211|gb|AAM61552.1| thylakoid lumen protein, chloroplast precursor [Arabidopsis
thaliana]
Length = 247
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/149 (65%), Positives = 114/149 (76%), Gaps = 4/149 (2%)
Query: 57 DARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALA---ANEDLRVYTDELN 113
D+ + RI +D KRR+VM Q+A + P +S A A A+E RVYTDE N
Sbjct: 38 DSSNEEQHRISSRDHVG-MKRRDVMLQIASSVFFLPLAISPAFAETNASEAFRVYTDETN 96
Query: 114 KFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFA 173
KFEISIPQDWQ+G EPNGFKSITAFYPQE S+S+VS+ ITGLGPDFTRMESFGKVEAFA
Sbjct: 97 KFEISIPQDWQVGQAEPNGFKSITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAFA 156
Query: 174 DTLVSGLDRSWRRPPGVAAKLIDCKASKG 202
+TLVSGLDRSW++P GV AKLID +ASKG
Sbjct: 157 ETLVSGLDRSWQKPVGVTAKLIDSRASKG 185
>gi|18411110|ref|NP_565131.1| PsbP domain-containing protein 3 [Arabidopsis thaliana]
gi|18203439|sp|Q9S720.2|PPD3_ARATH RecName: Full=PsbP domain-containing protein 3, chloroplastic;
AltName: Full=OEC23-like protein 2; Flags: Precursor
gi|32815945|gb|AAP88357.1| At1g76450 [Arabidopsis thaliana]
gi|110742837|dbj|BAE99317.1| hypothetical protein [Arabidopsis thaliana]
gi|332197723|gb|AEE35844.1| PsbP domain-containing protein 3 [Arabidopsis thaliana]
Length = 247
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/149 (65%), Positives = 114/149 (76%), Gaps = 4/149 (2%)
Query: 57 DARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALA---ANEDLRVYTDELN 113
D+ + RI +D KRR+VM Q+A + P +S A A A+E RVYTDE N
Sbjct: 38 DSSNEEQHRISSRDHVG-MKRRDVMLQIASSVFFLPLAISPAFAETNASEAFRVYTDETN 96
Query: 114 KFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFA 173
KFEISIPQDWQ+G EPNGFKSITAFYPQE S+S+VS+ ITGLGPDFTRMESFGKVEAFA
Sbjct: 97 KFEISIPQDWQVGQAEPNGFKSITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAFA 156
Query: 174 DTLVSGLDRSWRRPPGVAAKLIDCKASKG 202
+TLVSGLDRSW++P GV AKLID +ASKG
Sbjct: 157 ETLVSGLDRSWQKPVGVTAKLIDSRASKG 185
>gi|297839519|ref|XP_002887641.1| hypothetical protein ARALYDRAFT_476802 [Arabidopsis lyrata subsp.
lyrata]
gi|297333482|gb|EFH63900.1| hypothetical protein ARALYDRAFT_476802 [Arabidopsis lyrata subsp.
lyrata]
Length = 225
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 113/150 (75%), Gaps = 5/150 (3%)
Query: 57 DARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALA---ANEDLRVYTDELN 113
D+ + RI +D KRRE M Q+A + P VS A A A+E RVYTDE N
Sbjct: 15 DSSNEEQHRISSRDHVG-IKRREAMLQIASSVFFLPLAVSPAFAETNASEAFRVYTDEAN 73
Query: 114 KFEISIPQ-DWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAF 172
KFEISIPQ DWQ+G EPNGFKSITAFYPQE S+S+VS+ ITGLGPDFTRMESFGKVEAF
Sbjct: 74 KFEISIPQEDWQVGQAEPNGFKSITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAF 133
Query: 173 ADTLVSGLDRSWRRPPGVAAKLIDCKASKG 202
A+TLVSGLDRSW++P GV AKLID ++SKG
Sbjct: 134 AETLVSGLDRSWQKPAGVTAKLIDSRSSKG 163
>gi|388507848|gb|AFK41990.1| unknown [Medicago truncatula]
Length = 241
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 105/129 (81%), Gaps = 3/129 (2%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAGEPNGF 133
RR+++ + A + + S ALA N ED +YTD+ NKF+I IPQ+WQ+G GE GF
Sbjct: 51 RRQLILHTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAGF 110
Query: 134 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 193
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLVSGLDRSW++PPGVAAK
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAK 170
Query: 194 LIDCKASKG 202
LIDCK+SKG
Sbjct: 171 LIDCKSSKG 179
>gi|357467179|ref|XP_003603874.1| PsbP domain-containing protein [Medicago truncatula]
gi|355492922|gb|AES74125.1| PsbP domain-containing protein [Medicago truncatula]
Length = 241
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 105/129 (81%), Gaps = 3/129 (2%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAGEPNGF 133
RR+++ + A + + S ALA N ED +YTD+ NKF+I IPQ+WQ+G GE GF
Sbjct: 51 RRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAGF 110
Query: 134 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 193
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLVSGLDRSW++PPGVAAK
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAK 170
Query: 194 LIDCKASKG 202
LIDCK+SKG
Sbjct: 171 LIDCKSSKG 179
>gi|388521577|gb|AFK48850.1| unknown [Lotus japonicus]
Length = 250
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/139 (64%), Positives = 113/139 (81%), Gaps = 5/139 (3%)
Query: 77 RREVMFQLAFTA-CSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAGEPNG 132
RR+++F + A + P+ V ALA N ED+R+Y D+ NKF+I IPQDW++G G+ +G
Sbjct: 59 RRQLVFYTSLAAFAAAPSTVLKALALNDVVEDVRIYIDDENKFKIEIPQDWEVGTGDSSG 118
Query: 133 FKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAA 192
FKS+TAFYP+EASSS+VSV ITGLGPDFT+MESFGKV+ FA+TLVSGLDRSWR+PPGVAA
Sbjct: 119 FKSLTAFYPKEASSSNVSVAITGLGPDFTKMESFGKVDEFAETLVSGLDRSWRKPPGVAA 178
Query: 193 KLIDCKASKGI-CIFFSIQ 210
KLI+ K SKGI I +S+Q
Sbjct: 179 KLINSKPSKGIYYIEYSLQ 197
>gi|388515155|gb|AFK45639.1| unknown [Medicago truncatula]
Length = 241
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 104/129 (80%), Gaps = 3/129 (2%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAGEPNGF 133
RR+++ + A + + S ALA N ED +Y D+ NKF+I IPQ+WQ+G GE GF
Sbjct: 51 RRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYADDENKFKIDIPQEWQIGTGESAGF 110
Query: 134 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 193
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLVSGLDRSW++PPGVAAK
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAK 170
Query: 194 LIDCKASKG 202
LIDCK+SKG
Sbjct: 171 LIDCKSSKG 179
>gi|357467177|ref|XP_003603873.1| PsbP domain-containing protein [Medicago truncatula]
gi|355492921|gb|AES74124.1| PsbP domain-containing protein [Medicago truncatula]
Length = 253
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 104/128 (81%), Gaps = 3/128 (2%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAGEPNGF 133
RR+++ + A + + S ALA N ED +YTD+ NKF+I IPQ+WQ+G GE GF
Sbjct: 51 RRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAGF 110
Query: 134 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 193
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLVSGLDRSW++PPGVAAK
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAK 170
Query: 194 LIDCKASK 201
LIDCK+SK
Sbjct: 171 LIDCKSSK 178
>gi|356508481|ref|XP_003522985.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Glycine max]
Length = 244
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 109/142 (76%), Gaps = 8/142 (5%)
Query: 75 TKRREVMFQLAFTACSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAG--E 129
RR+++ +F V ALA N ED+RVYTD+ NKF+I IPQ+WQ+G G E
Sbjct: 52 VNRRQLILHTPVAVAAFA--VPNALALNDVSEDVRVYTDDENKFKIEIPQEWQVGTGDGE 109
Query: 130 PNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPG 189
+GFKSITAFYP AS+S+VSVVITGLGPDFTRMESFGKV+ FA TLVSGLDRSWR+PPG
Sbjct: 110 SSGFKSITAFYPTVASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPPG 169
Query: 190 VAAKLIDCKASKGI-CIFFSIQ 210
VAAKLIDCK+S GI I +S+Q
Sbjct: 170 VAAKLIDCKSSDGIYYIEYSLQ 191
>gi|356517170|ref|XP_003527262.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Glycine max]
Length = 248
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/141 (62%), Positives = 111/141 (78%), Gaps = 3/141 (2%)
Query: 66 IEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALA-ANEDLRVYTDELNKFEISIPQDWQ 124
IEE++ + +R+ ++ A +F + AL +ED+RVYTD+ NKF+I IP++WQ
Sbjct: 47 IEEEEGRAVNRRQLILHTPVAAAAAFAVPNALALNDVSEDVRVYTDDENKFKIEIPEEWQ 106
Query: 125 LGAG--EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDR 182
+G G E +GFKSITAFYP +AS+S+VSVVITGLGPDFTRMESFGKV+ FA TLVSGLDR
Sbjct: 107 VGTGDGESSGFKSITAFYPTQASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDR 166
Query: 183 SWRRPPGVAAKLIDCKASKGI 203
SWR+PPGVAAKLIDCK+S GI
Sbjct: 167 SWRKPPGVAAKLIDCKSSNGI 187
>gi|255646871|gb|ACU23906.1| unknown [Glycine max]
Length = 244
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 108/142 (76%), Gaps = 8/142 (5%)
Query: 75 TKRREVMFQLAFTACSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAG--E 129
RR+++ +F V ALA N ED+RVYTD+ NKF+I IPQ+WQ+G G E
Sbjct: 52 VNRRQLILHTPVAVAAF--AVPNALALNDVSEDVRVYTDDENKFKIEIPQEWQVGTGDGE 109
Query: 130 PNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPG 189
+GFKSITAFYP AS+S+VSVVITG GPDFTRMESFGKV+ FA TLVSGLDRSWR+PPG
Sbjct: 110 SSGFKSITAFYPTVASNSNVSVVITGPGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPPG 169
Query: 190 VAAKLIDCKASKGI-CIFFSIQ 210
VAAKLIDCK+S GI I +S+Q
Sbjct: 170 VAAKLIDCKSSDGIYYIEYSLQ 191
>gi|115477246|ref|NP_001062219.1| Os08g0512500 [Oryza sativa Japonica Group]
gi|42408803|dbj|BAD10064.1| thylakoid lumen protein, chloroplast precursor-like [Oryza sativa
Japonica Group]
gi|113624188|dbj|BAF24133.1| Os08g0512500 [Oryza sativa Japonica Group]
gi|215686998|dbj|BAG90812.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201441|gb|EEC83868.1| hypothetical protein OsI_29855 [Oryza sativa Indica Group]
gi|222640852|gb|EEE68984.1| hypothetical protein OsJ_27910 [Oryza sativa Japonica Group]
Length = 242
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/108 (63%), Positives = 88/108 (81%), Gaps = 3/108 (2%)
Query: 103 EDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTR 162
E R Y DE NKF I+IPQDW +GAGE +GFKS+TAFYP + + S+VSV ITG+GPDFT
Sbjct: 79 EGFRTYEDEANKFSIAIPQDWLIGAGEVSGFKSVTAFYPDQVADSNVSVAITGIGPDFTS 138
Query: 163 MESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGICIFFSIQ 210
++SFG V+AFA+TLV+GLDRSW+RPPGVAAKLI+ +A+ G F+ I+
Sbjct: 139 LKSFGDVDAFAETLVNGLDRSWKRPPGVAAKLINSRAANG---FYYIE 183
>gi|357141874|ref|XP_003572377.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Brachypodium distachyon]
Length = 352
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 100/143 (69%), Gaps = 8/143 (5%)
Query: 76 KRREVMFQLAFTACSFPAIVS-------YALAANEDLRVYTDELNKFEISIPQDWQLGAG 128
+RR+ + + F+A + + S A E Y DE NKF I +PQ WQ+GAG
Sbjct: 155 RRRDALLGVVFSAGTATLLASPAGALAEAAAEVQEGFSEYQDEANKFSIVVPQGWQMGAG 214
Query: 129 EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPP 188
E +GFK++TAF+P +A+ SSVSVVITG+GPDFT ++SFG V+AFA+ LV+GLDRSW+RP
Sbjct: 215 EGSGFKNVTAFFPDKAADSSVSVVITGIGPDFTSLKSFGDVDAFAENLVTGLDRSWQRPA 274
Query: 189 GVAAKLIDCKASKGI-CIFFSIQ 210
GV AKLID +AS G+ I +++Q
Sbjct: 275 GVTAKLIDSRASNGMYYIEYTLQ 297
>gi|356577616|ref|XP_003556920.1| PREDICTED: LOW QUALITY PROTEIN: psbP domain-containing protein 3,
chloroplastic-like [Glycine max]
Length = 113
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/102 (70%), Positives = 84/102 (82%), Gaps = 2/102 (1%)
Query: 99 LAANEDLRVYTDELNKFEISIPQDWQLGA--GEPNGFKSITAFYPQEASSSSVSVVITGL 156
+ +ED+RVYT+ NKF+I IPQ+WQ+G GE +GFKSITAFYP AS+S+VSVVITGL
Sbjct: 12 IDVSEDVRVYTENENKFKIEIPQEWQVGTRDGESSGFKSITAFYPTVASNSNVSVVITGL 71
Query: 157 GPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCK 198
GP+FTRMESFGKV FA TLVSGLD S R+P GVAAKLI CK
Sbjct: 72 GPNFTRMESFGKVGEFAQTLVSGLDGSXRKPSGVAAKLIHCK 113
>gi|226496587|ref|NP_001147730.1| LOC100281340 [Zea mays]
gi|195613364|gb|ACG28512.1| thylakoid lumen protein [Zea mays]
gi|224034069|gb|ACN36110.1| unknown [Zea mays]
gi|414869459|tpg|DAA48016.1| TPA: Thylakoid lumen protein isoform 1 [Zea mays]
gi|414869460|tpg|DAA48017.1| TPA: Thylakoid lumen protein isoform 2 [Zea mays]
Length = 256
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 109/161 (67%), Gaps = 8/161 (4%)
Query: 51 KQEQEDDARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIV-SYALA------ANE 103
++ Q+ A T+ R ++ +R ++ + F+A + P + + ALA + E
Sbjct: 34 RRLQQAAATTVCHCRSARVEEGLLGRRDALLLGIVFSAATPPLLAPAGALADEATAESQE 93
Query: 104 DLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASS-SSVSVVITGLGPDFTR 162
Y DE NKF I +PQ W +GAGE +G KS+TAFYP++A++ S+VSV ITG+GPDFT
Sbjct: 94 GFTTYEDEANKFSIQVPQGWLVGAGEASGIKSVTAFYPEQAATDSNVSVAITGIGPDFTS 153
Query: 163 MESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGI 203
++SFG V+AFA+ LV+GLDRSW+RPPG+AAKLID +A+ G+
Sbjct: 154 LKSFGDVDAFAEGLVNGLDRSWQRPPGLAAKLIDSRAANGL 194
>gi|326501564|dbj|BAK02571.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 167
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/111 (58%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
Query: 101 ANEDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDF 160
A E Y DE NKF ++IPQ WQ+GAGE +GFK++TAF+P++ +SSVSVVITG+GPDF
Sbjct: 2 AQEGFTAYEDEANKFTLAIPQGWQVGAGERSGFKNVTAFFPEQNPNSSVSVVITGIGPDF 61
Query: 161 TRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGI-CIFFSIQ 210
T ++SFG V+ FA+ LV+GLDRSW+RP G+ AKLID KA+ G+ I +++Q
Sbjct: 62 TSLKSFGNVDEFAENLVTGLDRSWQRPAGLTAKLIDSKAANGLYYIEYTLQ 112
>gi|326518660|dbj|BAJ88359.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 287
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 102/144 (70%), Gaps = 9/144 (6%)
Query: 76 KRREVMFQL---AFTACSFPAIV-----SYALAANEDLRVYTDELNKFEISIPQDWQLGA 127
KRR+ + + A A S P +V + A A E Y DE NKF ++IPQ WQ+GA
Sbjct: 89 KRRDALLGVLLSATAASSAPLLVPAEAFAEAAEAQEGFTAYEDEANKFTLAIPQGWQVGA 148
Query: 128 GEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRP 187
GE +GFK++TAF+P++ +SSVSVVITG+GPDFT ++SFG V+ FA+ LV+GLDRSW+RP
Sbjct: 149 GERSGFKNVTAFFPEQNPNSSVSVVITGIGPDFTSLKSFGNVDEFAENLVTGLDRSWQRP 208
Query: 188 PGVAAKLIDCKASKGI-CIFFSIQ 210
G+ AKLID KA+ G+ I +++Q
Sbjct: 209 AGLTAKLIDSKAANGLYYIEYTLQ 232
>gi|326512572|dbj|BAJ99641.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 102/144 (70%), Gaps = 9/144 (6%)
Query: 76 KRREVMFQL---AFTACSFPAIV-----SYALAANEDLRVYTDELNKFEISIPQDWQLGA 127
KRR+ + + A A S P +V + A A E Y DE NKF ++IPQ WQ+GA
Sbjct: 46 KRRDALLGVLLSATAASSAPLLVPAEAFAEAAEAQEGFTAYEDEANKFTLAIPQGWQVGA 105
Query: 128 GEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRP 187
GE +GFK++TAF+P++ +SSVSVVITG+GPDFT ++SFG V+ FA+ LV+GLDRSW+RP
Sbjct: 106 GERSGFKNVTAFFPEQNPNSSVSVVITGIGPDFTSLKSFGNVDEFAENLVTGLDRSWQRP 165
Query: 188 PGVAAKLIDCKASKGI-CIFFSIQ 210
G+ AKLID KA+ G+ I +++Q
Sbjct: 166 AGLTAKLIDSKAANGLYYIEYTLQ 189
>gi|116784465|gb|ABK23352.1| unknown [Picea sitchensis]
Length = 256
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 99/143 (69%), Gaps = 5/143 (3%)
Query: 73 SRTKRREVMFQLAFTACSFPAIVSYALAA----NEDLRVYTDELNKFEISIPQDWQLGAG 128
SR RR+ + Q+A + P VS A AA ED +Y DE +KF + +P+DW G G
Sbjct: 61 SRNGRRQAICQIAALFSAIPCTVSAARAAETELQEDYELYKDETDKFSLLVPRDWIKGEG 120
Query: 129 EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPP 188
+ +G +++TAFYP+ S+V+V+ITGL D+T+MESFG V+AFA+TLV+ LDRSW+RPP
Sbjct: 121 KTDGQRAVTAFYPESGIVSNVNVIITGLSADYTKMESFGTVDAFAETLVNSLDRSWKRPP 180
Query: 189 GVAAKLIDCKASKGI-CIFFSIQ 210
G AAKL++ K+ G+ I +S+Q
Sbjct: 181 GQAAKLLNAKSKNGLYYIEYSLQ 203
>gi|242082241|ref|XP_002445889.1| hypothetical protein SORBIDRAFT_07g027500 [Sorghum bicolor]
gi|241942239|gb|EES15384.1| hypothetical protein SORBIDRAFT_07g027500 [Sorghum bicolor]
Length = 253
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 84/104 (80%), Gaps = 1/104 (0%)
Query: 101 ANEDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASS-SSVSVVITGLGPD 159
+ E Y DE NKF I +PQ W +GAGE +G KS+TAFYP++A++ S+VSV ITG+GPD
Sbjct: 87 SQEGFTTYEDEANKFSIQVPQGWLVGAGEASGIKSVTAFYPEQAAADSNVSVAITGIGPD 146
Query: 160 FTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGI 203
FT ++SFG V++FA+ LV+GLDRSW+RPPG+AAKLID +A+ G+
Sbjct: 147 FTSLKSFGDVDSFAEGLVNGLDRSWQRPPGLAAKLIDSRAANGL 190
>gi|116782591|gb|ABK22563.1| unknown [Picea sitchensis]
Length = 208
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 98/143 (68%), Gaps = 5/143 (3%)
Query: 73 SRTKRREVMFQLAFTACSFPAIVSYALAA----NEDLRVYTDELNKFEISIPQDWQLGAG 128
SR RR+ + Q+A + P VS A AA ED +Y DE +KF + +P+DW G G
Sbjct: 61 SRNGRRQAICQIAALFSAIPCTVSAARAAETELQEDYELYKDETDKFSLLVPRDWIKGEG 120
Query: 129 EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPP 188
+ +G +++TAFYP+ S+V+V+ITGL D+T+MES G V+AFA+TLV+ LDRSW+RPP
Sbjct: 121 KTDGQRAVTAFYPESGIVSNVNVIITGLSADYTKMESLGTVDAFAETLVNSLDRSWKRPP 180
Query: 189 GVAAKLIDCKASKGI-CIFFSIQ 210
G AAKL++ K+ G+ I +S+Q
Sbjct: 181 GQAAKLLNAKSKNGLYYIEYSLQ 203
>gi|25373339|pir||C96792 unknown protein F14G6.5 [imported] - Arabidopsis thaliana
gi|6554474|gb|AAF16656.1|AC012394_5 unknown protein; 20843-19352 [Arabidopsis thaliana]
gi|12323974|gb|AAG51945.1|AC015450_6 unknown protein; 20920-22411 [Arabidopsis thaliana]
Length = 220
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 90/149 (60%), Gaps = 31/149 (20%)
Query: 57 DARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALA---ANEDLRVYTDELN 113
D+ + RI +D KRR+VM Q+A + P +S A A A+E RVYTDE N
Sbjct: 38 DSSNEEQHRISSRDHVG-MKRRDVMLQIASSVFFLPLAISPAFAETNASEAFRVYTDETN 96
Query: 114 KFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFA 173
KFEISIPQ VS+ ITGLGPDFTRMESFGKVEAFA
Sbjct: 97 KFEISIPQ---------------------------VSIAITGLGPDFTRMESFGKVEAFA 129
Query: 174 DTLVSGLDRSWRRPPGVAAKLIDCKASKG 202
+TLVSGLDRSW++P GV AKLID +ASKG
Sbjct: 130 ETLVSGLDRSWQKPVGVTAKLIDSRASKG 158
>gi|357467181|ref|XP_003603875.1| PsbP domain-containing protein [Medicago truncatula]
gi|355492923|gb|AES74126.1| PsbP domain-containing protein [Medicago truncatula]
Length = 174
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/111 (58%), Positives = 84/111 (75%), Gaps = 3/111 (2%)
Query: 76 KRREVMFQLAFTACSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAGEPNG 132
RR+++ + A + + S ALA N ED +YTD+ NKF+I IPQ+WQ+G GE G
Sbjct: 50 NRRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAG 109
Query: 133 FKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRS 183
FKS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLV LD++
Sbjct: 110 FKSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVLFLDQN 160
>gi|168003549|ref|XP_001754475.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694577|gb|EDQ80925.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 255
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 82/127 (64%), Gaps = 3/127 (2%)
Query: 76 KRREVMFQ-LAFTACSF--PAIVSYALAANEDLRVYTDELNKFEISIPQDWQLGAGEPNG 132
+RREV+ Q L + SF PA + A + Y D +KF + +PQ W G G+ +G
Sbjct: 64 QRREVIGQALLAMSMSFAPPARSATDTDAATEFTTYEDAADKFTLLVPQAWNRGEGKTSG 123
Query: 133 FKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAA 192
+ +TAFYP + ++V++VITGLG DFT + SFG + FA+ LV+ LDRSW++PPG A
Sbjct: 124 QRKVTAFYPADGGLTNVNIVITGLGADFTSLGSFGTADNFAENLVNSLDRSWQKPPGQKA 183
Query: 193 KLIDCKA 199
+L+DCK+
Sbjct: 184 RLVDCKS 190
>gi|414869461|tpg|DAA48018.1| TPA: hypothetical protein ZEAMMB73_646546 [Zea mays]
gi|414869462|tpg|DAA48019.1| TPA: hypothetical protein ZEAMMB73_646546 [Zea mays]
Length = 178
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 85/135 (62%), Gaps = 8/135 (5%)
Query: 51 KQEQEDDARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIV-SYALA------ANE 103
++ Q+ A T+ R ++ +R ++ + F+A + P + + ALA + E
Sbjct: 34 RRLQQAAATTVCHCRSARVEEGLLGRRDALLLGIVFSAATPPLLAPAGALADEATAESQE 93
Query: 104 DLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASS-SSVSVVITGLGPDFTR 162
Y DE NKF I +PQ W +GAGE +G KS+TAFYP++A++ S+VSV ITG+GPDFT
Sbjct: 94 GFTTYEDEANKFSIQVPQGWLVGAGEASGIKSVTAFYPEQAATDSNVSVAITGIGPDFTS 153
Query: 163 MESFGKVEAFADTLV 177
++SFG V+AFA+ LV
Sbjct: 154 LKSFGDVDAFAEGLV 168
>gi|215274041|gb|ACJ64918.1| unknown [Arachis diogoi]
Length = 110
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 51/57 (89%), Gaps = 1/57 (1%)
Query: 155 GLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGI-CIFFSIQ 210
G+GPDFT+MESFGKVE FA+TL+ GLDRSW+RPPGVAAKLIDCK+SKG I +S+Q
Sbjct: 1 GVGPDFTKMESFGKVEEFAETLIGGLDRSWQRPPGVAAKLIDCKSSKGFYYIEYSLQ 57
>gi|302818180|ref|XP_002990764.1| hypothetical protein SELMODRAFT_448162 [Selaginella moellendorffii]
gi|300141502|gb|EFJ08213.1| hypothetical protein SELMODRAFT_448162 [Selaginella moellendorffii]
Length = 221
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 77/111 (69%), Gaps = 3/111 (2%)
Query: 101 ANEDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDF 160
A ++ +VY +E +KF +++P+DW G G+ G + + AF+P +A+ +V+V+IT LG DF
Sbjct: 58 AADEYQVY-EEQDKFSLTVPKDWIKGEGK-AGSRRVVAFHPSKATFPNVNVIITNLGADF 115
Query: 161 TRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGICIF-FSIQ 210
T + S G V+AFA ++V +DRS++RPPG AA+L++ + G+ +++Q
Sbjct: 116 TGIGSLGSVDAFAASVVGSMDRSYKRPPGTAARLVNAVSRNGMYYLDYTVQ 166
>gi|413953068|gb|AFW85717.1| hypothetical protein ZEAMMB73_055926 [Zea mays]
Length = 277
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 102 NEDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASS-SSVSVVITGLGPDF 160
+E Y DE NKF I +PQ W +GAGE +G KS+TAFYP++A++ S+VSV I +GPDF
Sbjct: 124 DEGFTTYEDEANKFNIQVPQGWLVGAGEASGIKSVTAFYPEQAATDSNVSVAIIEIGPDF 183
Query: 161 TRMESFGKVEAFADTLV 177
T ++SFG V AFA+ LV
Sbjct: 184 TSLKSFGDVAAFAEGLV 200
>gi|255083562|ref|XP_002504767.1| oxygen-evolving enhancer PsbP [Micromonas sp. RCC299]
gi|226520035|gb|ACO66025.1| oxygen-evolving enhancer PsbP [Micromonas sp. RCC299]
Length = 248
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 16/162 (9%)
Query: 61 LNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAANED------LRVYTDELNK 114
++R R E D S +RRE+ LA A S +I ++ A D +VY DE +K
Sbjct: 32 VSRTRAEASADGS-LERREL---LAGAATSLVSIAAFPRVARADEPATTLTQVYNDEEDK 87
Query: 115 FEISIPQDWQLGAGE----PNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVE 170
+ +++P DW+ G+ P + + AFYP +V+VV T LG D+ +M SFG +
Sbjct: 88 YSLAVPSDWERALGDTSPNPQSTRKVIAFYPPGQPEINVNVVATALGADYPKMGSFGSPD 147
Query: 171 AFADTLVSGLDRSW-RRPPGVAAKLIDCK-ASKGICIFFSIQ 210
FA + +G+ R R+ P + ++D K A I ++++
Sbjct: 148 EFAYGVAAGMTRPKPRQGPKQFSYVVDAKNAGDRYVIEYTVE 189
>gi|307103403|gb|EFN51663.1| hypothetical protein CHLNCDRAFT_139877 [Chlorella variabilis]
Length = 295
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 55/118 (46%), Gaps = 26/118 (22%)
Query: 107 VYTDELNKFEISIPQDWQLGAG----------------EPNGFKSITAFYPQEASSSSVS 150
VYTD +KF I +P W L G G + + AF P++ SV+
Sbjct: 107 VYTDPEDKFSIEVPSGWALATGAFGEEGTLTTNQARFSNAAGLRRVVAFLPEDKPEVSVA 166
Query: 151 VVITGLGPDFTRMESFGKVEAFADTLVSGLDRS-------WRR---PPGVAAKLIDCK 198
V I LG D+T + SFG + FA +V+ +D S WRR PP AKL+D K
Sbjct: 167 VTIQFLGADYTGLGSFGTAQDFATGVVNKMDNSYILKLPEWRRAKEPPVQVAKLLDVK 224
>gi|303283586|ref|XP_003061084.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457435|gb|EEH54734.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 265
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 100 AANEDLRVYTDELNKFEISIPQDWQLGAG----EPNGFKSITAFYPQEASSSSVSVVITG 155
A + + Y D +K+ S+P DW+ G P + +TA++P +V+VV T
Sbjct: 90 AEGAETKRYVDAEDKYSFSVPADWEQAIGTTDDNPQSSRRVTAYFPPGDPDINVNVVCTA 149
Query: 156 LGPDFTRMESFGKVEAFADTLVSGLDR 182
LG D+ +M SFG + FA + +G+ R
Sbjct: 150 LGADYPKMGSFGSPDEFAFGVAAGMTR 176
>gi|412985511|emb|CCO18957.1| predicted protein [Bathycoccus prasinos]
Length = 319
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 33/140 (23%)
Query: 76 KRREVMFQLAFTACSFPAIV----------SYALAANED--------------LRVYTDE 111
+R+ +M TA +F ++V YA AA ED YTDE
Sbjct: 88 RRKAMMVSATTTAFAFASMVLSMDDTNKNNYYAFAAEEDESSTKMMNTNTNKNTTTYTDE 147
Query: 112 LNKFEISIPQD-WQL------GAGEPNGFKSITAFYPQEASSSSV--SVVITGLGPDFTR 162
+ KF +S P D WQL G+G+ +G + + AF P+ A+ V S+V T +G D+ +
Sbjct: 148 VLKFSLSYPTDSWQLLVGETGGSGDRSGSRQVIAFAPKNANPKDVNISLVATPVGADYPK 207
Query: 163 MESFGKVEAFADTLVSGLDR 182
M SFG F +V+ +++
Sbjct: 208 MGSFGSPFEFGYNMVNPMNK 227
>gi|159480798|ref|XP_001698469.1| hypothetical protein CHLREDRAFT_205923 [Chlamydomonas reinhardtii]
gi|158282209|gb|EDP07962.1| predicted protein [Chlamydomonas reinhardtii]
Length = 258
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 20/110 (18%)
Query: 108 YTDELNKFEISIPQDWQLGAGEPNGFKSIT---------AFYPQEASSSSVSVVIT--GL 156
YTD + F + IP +W G G+ +G S + A++P+ S V+V IT +
Sbjct: 77 YTDPQDAFTLKIPANWGFGEGQLSGNSSFSGASGARRTLAWFPENVSPRDVNVTITVTNV 136
Query: 157 GPDFTRMESFGKVEAFADTLVSGLDRSW---------RRPPGVAAKLIDC 197
+FT++ SFG FA LV+ DRS+ R P + AKLID
Sbjct: 137 SVEFTKLGSFGTPLQFASNLVNSQDRSYMLRGPEWARRNEPIMVAKLIDA 186
>gi|384245846|gb|EIE19338.1| hypothetical protein COCSUDRAFT_58632 [Coccomyxa subellipsoidea
C-169]
Length = 191
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 132 GFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVA 191
G + A+YP+ + ++V+V++T +G D+T + SFG ++F + L++ LDRS+ G+
Sbjct: 49 GTRRALAWYPEGGTDTNVTVLVTNVGADYTALGSFGSADSFGENLIASLDRSFLLRGGMN 108
Query: 192 -----AKLIDCKASKGICIF-FSIQ 210
AKL+D K+ G+ +++Q
Sbjct: 109 RPQSRAKLLDAKSRSGMYFLEYTVQ 133
>gi|308799735|ref|XP_003074648.1| thylakoid lumen protein, chloroplast prec (ISS) [Ostreococcus
tauri]
gi|116000819|emb|CAL50499.1| thylakoid lumen protein, chloroplast prec (ISS) [Ostreococcus
tauri]
Length = 195
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 101 ANEDLRVYTDELNKFEISIPQDWQLGAG------EPNGFKS---ITAFYPQEASSSSVSV 151
A+E LR Y D+ +F + P DW + G P G + T P +V+V
Sbjct: 13 ADESLRTYADDELRFTLEYPSDWVVATGSLERSENPMGGGARDVWTISPPGRTRDVNVTV 72
Query: 152 VITGLGPDFTRMESFGKVEAFADTLVSGLDR 182
V T G DFT+M S G F LV+ L R
Sbjct: 73 VATPAGADFTKMGSLGDAYGFGMGLVAPLHR 103
>gi|335046123|ref|ZP_08539146.1| putative membrane protein [Oribacterium sp. oral taxon 108 str.
F0425]
gi|333759909|gb|EGL37466.1| putative membrane protein [Oribacterium sp. oral taxon 108 str.
F0425]
Length = 343
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 51 KQEQEDDARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAANEDLRV--- 107
K E++ R + + QDD SR K+RE +F + F CSF A++ +A N + +
Sbjct: 4 KDSTEENRRMPENYHL--QDDASRKKKRERIFTVLFLFCSFCALMIFAFYVNRHIHIKAL 61
Query: 108 YTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPD 159
Y D+L F QD+ P G + F P + S + +V G P+
Sbjct: 62 YMDDLYLFSFFREQDF-FTFSFPIG--NAVRFRPVYWAISYIEMVFVGNDPN 110
>gi|363896506|ref|ZP_09323057.1| hypothetical protein HMPREF9624_01801 [Oribacterium sp. ACB7]
gi|361960792|gb|EHL14025.1| hypothetical protein HMPREF9624_01801 [Oribacterium sp. ACB7]
Length = 613
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 51 KQEQEDDARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAANEDLRV--- 107
K E++ R + + QDD SR K+RE +F + F CSF A++ +A N + +
Sbjct: 4 KDSTEENRRMPENYHL--QDDASRKKKRERIFTVLFLFCSFCALMIFAFYVNRHIHIKAL 61
Query: 108 YTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPD 159
Y D+L F QD+ P G + F P + S + +V G P+
Sbjct: 62 YMDDLYLFSFFREQDF-FTFSFPIG--NAVRFRPVYWALSYIEMVFVGNDPN 110
>gi|145341129|ref|XP_001415667.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575890|gb|ABO93959.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 192
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 105 LRVYTDELNKFEISIPQDWQLGAGEP--------NGFKSITAFYPQEASSSSVSVVI--T 154
L Y D+ KF++ P DW GE G + + P A++ V+V I T
Sbjct: 13 LTTYEDDKLKFKVQYPSDWTTSTGETPASEEILGGGARDLFTISPPGANARDVNVTIVAT 72
Query: 155 GLGPDFTRMESFGKVEAFADTLVSGLDR 182
G DFT+M S G F LV L++
Sbjct: 73 PAGADFTKMGSLGDAYGFGYGLVVPLNK 100
>gi|363899965|ref|ZP_09326471.1| hypothetical protein HMPREF9625_01131 [Oribacterium sp. ACB1]
gi|395207515|ref|ZP_10397039.1| putative membrane protein [Oribacterium sp. ACB8]
gi|361956819|gb|EHL10131.1| hypothetical protein HMPREF9625_01131 [Oribacterium sp. ACB1]
gi|394706592|gb|EJF14099.1| putative membrane protein [Oribacterium sp. ACB8]
Length = 618
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 49 CKKQ--EQEDDARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAANEDLR 106
KKQ + ED N ++EE+ + R KR+ +F+L F CSF ++ +A N +
Sbjct: 29 VKKQSLQDEDYVEKKNSLQVEEKRE-KRQKRQGNIFRLLFFLCSFCLLMLFAFYVNRHIH 87
Query: 107 V---YTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPD 159
+ Y D+L F QD+ L P G F P + S + +V G P+
Sbjct: 88 IKALYMDDLYLFSFFREQDF-LTFSFPIG--EAVRFRPVYWALSYIEMVFVGNDPN 140
>gi|428171810|gb|EKX40724.1| hypothetical protein GUITHDRAFT_113254 [Guillardia theta CCMP2712]
Length = 222
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 108 YTDELNKFEISIPQDWQLGAGE-PNGFKS-----ITAFYPQEASSSSVSVVITGLGPDFT 161
Y D+ FE +PQ W G E P G ++ I +F + ++++V + PD++
Sbjct: 64 YADDARGFEFQVPQGWIQGEAEFPGGNRNPARPKIISFRSPTSDDFNIALVSYSIQPDYS 123
Query: 162 RMESFGKVEAFADTLVS 178
++ SFG +E A ++
Sbjct: 124 KLGSFGTIEDVAKNIIG 140
>gi|443716926|gb|ELU08219.1| hypothetical protein CAPTEDRAFT_197539 [Capitella teleta]
Length = 457
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 134 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADT 175
K + + P AS S + ++T +GPD TR S G+ AF+DT
Sbjct: 198 KLVLGYLPSPASDSGAASILTLVGPDSTRRMSRGRYSAFSDT 239
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.130 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,186,195,522
Number of Sequences: 23463169
Number of extensions: 124859424
Number of successful extensions: 282704
Number of sequences better than 100.0: 51
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 282626
Number of HSP's gapped (non-prelim): 52
length of query: 210
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 74
effective length of database: 9,168,204,383
effective search space: 678447124342
effective search space used: 678447124342
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)