BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028355
(210 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1ECE0|VAP41_ARATH Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41
PE=2 SV=1
Length = 266
Score = 247 bits (630), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 139/206 (67%), Positives = 164/206 (79%), Gaps = 2/206 (0%)
Query: 1 MAIADWHSRSNSDKK-LFGFCPFWQTSTTATPSSSASSTQNLTTSSSNPHVGVPNSSRPA 59
M I D + S KK LF CPFWQ +T + SS+ + QN + N + + S+P
Sbjct: 1 MPIGDRQNPSVEKKKNLFRLCPFWQRRSTTSSSSTQNPNQNYRSRHGNRNTDISAVSKPP 60
Query: 60 TKTVSYVARSLLPPRRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPK 119
T+S VARSLLP RRRLRLDPS+ LYFPYEPGKQ RSA++LKNTSKSH AFKFQTTAPK
Sbjct: 61 L-TMSSVARSLLPARRRLRLDPSSYLYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPK 119
Query: 120 SCYMRPPGGVLAPGDSIIATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVKGGIDYVPE 179
SCYMRPPGGVLAPG+S+ ATVFKFVE PENNE+QPL+QKSK KFKIMSLKVK G++YVPE
Sbjct: 120 SCYMRPPGGVLAPGESVFATVFKFVEHPENNEKQPLNQKSKVKFKIMSLKVKPGVEYVPE 179
Query: 180 LFDEQKDQVTVERILRVVFLNAERPS 205
LFDEQKDQV VE++LRV+F++A+RPS
Sbjct: 180 LFDEQKDQVAVEQVLRVIFIDADRPS 205
>sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2 OS=Arabidopsis thaliana GN=PVA42
PE=1 SV=1
Length = 295
Score = 232 bits (592), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/146 (74%), Positives = 130/146 (89%), Gaps = 1/146 (0%)
Query: 62 TVSYVARSLLPPRRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSC 121
+VS VA+S LP +RRL+LDPS LYFPYEPGKQ RSA+++KNTSKSHVAFKFQTTAPKSC
Sbjct: 93 SVSSVAKSFLPTKRRLKLDPSEKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSC 152
Query: 122 YMRPPGGVLAPGDSIIATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVKGGIDYVPELF 181
+MRPPG +LAPG++IIATVFKFVE PENNE+ P+DQ+S+ KFKIMSLKVKG +DYVPELF
Sbjct: 153 FMRPPGAILAPGETIIATVFKFVEPPENNEK-PMDQRSRVKFKIMSLKVKGPMDYVPELF 211
Query: 182 DEQKDQVTVERILRVVFLNAERPSPV 207
DEQKD V+ E+ILRV+FL+ ER +P
Sbjct: 212 DEQKDDVSKEQILRVIFLDPERSNPA 237
>sp|Q8LPQ7|VAP43_ARATH Vesicle-associated protein 4-3 OS=Arabidopsis thaliana GN=PVA43
PE=2 SV=1
Length = 287
Score = 216 bits (549), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 124/144 (86%), Gaps = 1/144 (0%)
Query: 62 TVSYVARSLLPPRRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSC 121
++S VARSLLP +RRL+LDPS LYFPYEPGKQ RSA+++KNTSKSHVAFKFQTT PKSC
Sbjct: 85 SMSSVARSLLPTKRRLKLDPSAKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTVPKSC 144
Query: 122 YMRPPGGVLAPGDSIIATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVKGGIDYVPELF 181
+MRP G +LAPG+ IIATVFKFVE PENNE+ P++QKS KFKIMSLK+K DY+PELF
Sbjct: 145 FMRPAGAILAPGEEIIATVFKFVEPPENNEK-PMEQKSGVKFKIMSLKMKVPTDYMPELF 203
Query: 182 DEQKDQVTVERILRVVFLNAERPS 205
+EQKD V+ E+++RVVFL+ E P+
Sbjct: 204 EEQKDHVSEEQVMRVVFLDPENPN 227
>sp|Q84WW5|VAP13_ARATH Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13
PE=2 SV=1
Length = 239
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 9/127 (7%)
Query: 85 LYFPYEPGKQTRSAVRLKN-TSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKF 143
L FP+E KQ+ +++L N T+ VAFK +TT P+ +RP GV+ PGDS TV
Sbjct: 14 LKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDSCNVTV--- 70
Query: 144 VEAPENNERQPLDQKSKDKFKIMSLKVKGGI---DYVPELFDEQKDQVTVERILRVVFLN 200
+ + PLD + KDKF + ++ V G + + E+F+++ +V + LRVV++
Sbjct: 71 --TMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVVYIP 128
Query: 201 AERPSPV 207
A PSPV
Sbjct: 129 ANPPSPV 135
>sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12
PE=1 SV=1
Length = 239
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 70/137 (51%), Gaps = 14/137 (10%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDS- 135
L +DP + L FP+E KQ ++ L N + ++VAFK +TT PK +RP GV+ P S
Sbjct: 6 LTIDPVD-LQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPRSSS 64
Query: 136 -IIATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVKGGI---DYVPELFDEQKDQVTVE 191
++ T+ EA P D + KDKF + + G D E+F ++ E
Sbjct: 65 EVLVTMQAQKEA-------PADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEE 117
Query: 192 RILRVVFLNAER-PSPV 207
LRVV++ R PSPV
Sbjct: 118 TKLRVVYVAPPRPPSPV 134
>sp|Q8VZ95|VAP11_ARATH Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11
PE=1 SV=1
Length = 256
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 84 NLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDS--IIATVF 141
+L FP+E KQ ++ L N + ++VAFK +TT PK +RP GV+ P + ++ T+
Sbjct: 29 DLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVTMQ 88
Query: 142 KFVEAPENNERQPLDQKSKDKFKIMSLKVKGGI---DYVPELFDEQKDQVTVERILRVVF 198
EAP D + KDKF + + G+ + PE+F ++ E LRV +
Sbjct: 89 AQKEAPS-------DMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRVTY 141
Query: 199 LNAER-PSPV 207
+ R PSPV
Sbjct: 142 VAPPRPPSPV 151
>sp|Q9LVU1|VAP21_ARATH Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21
PE=2 SV=1
Length = 220
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 83 NNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFK 142
+ L F +E KQ+ +++ N ++++VAFK +TT+PK ++RP GV+ P DS I V
Sbjct: 15 DELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWDSCIIRV-- 72
Query: 143 FVEAPENNERQPLDQKSKDKFKIMSLKV--KGGIDYVPE-LFDEQKDQVTVERILRVVFL 199
+ P D + KDKF + S V +D +P+ F + + E L+V ++
Sbjct: 73 ---TLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECKLKVSYI 129
>sp|B9DHD7|VAP22_ARATH Vesicle-associated protein 2-2 OS=Arabidopsis thaliana GN=PVA22
PE=1 SV=1
Length = 386
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
Query: 85 LYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGD----SIIATV 140
L F + KQT V+L NT+ +VAFK +TT+PK +RP GV+AP ++I
Sbjct: 13 LQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTCEFTVIMQA 72
Query: 141 FKFVEAPENNERQPLDQKSKDKFKIMSLKVKGGI---DYVPELFDEQKDQVTVERILRVV 197
FK P D KDKF I S V D +F + + + E LRV
Sbjct: 73 FK---------EPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVT 123
Query: 198 FL 199
+
Sbjct: 124 LV 125
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 24/183 (13%)
Query: 29 ATPSSSASSTQNLTTSSSNPHVGVPNSSRPATKTVSYVARSLLPPRRRLRLDPSNNLYFP 88
++PS+S S N + P VG+ + R + + L +DP + + FP
Sbjct: 143 SSPSASVSDKGNASEVFVGPSVGIVDLIRMSDEL--------------LIIDPVD-VQFP 187
Query: 89 YEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKFVEAPE 148
E K+ ++ L N ++++VAFK +TT K Y+RP GV+ P S V ++A
Sbjct: 188 IELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPRSS--CEVLVIMQAL- 244
Query: 149 NNERQPLDQKSKDKFKIMSLKVK---GGIDYVPELFDEQKDQVTVERILRVVFLNAER-P 204
+ P D + +DK V+ D E+F ++ E L+V+++ + P
Sbjct: 245 --KEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLKVMYVTPPQPP 302
Query: 205 SPV 207
SPV
Sbjct: 303 SPV 305
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
Query: 84 NLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKF 143
++ FP E KQ ++ L N + ++VAFK QTT PK ++P GV+ P S V
Sbjct: 13 DIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVLPRSS--CEVLVV 70
Query: 144 VEAPENNERQPLDQKSKDKFKIMSLKVKGGI---DYVPELFDEQKDQVTVERILRVVFLN 200
++A + P D++ KDK V+ G + E+F ++ E I +++++
Sbjct: 71 MQAL---KEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETIFKIIYVA 127
Query: 201 AERP-SPV 207
+P SPV
Sbjct: 128 PPQPQSPV 135
>sp|O82213|VAP31_ARATH Vesicle-associated protein 3-1 OS=Arabidopsis thaliana GN=PVA31
PE=3 SV=1
Length = 149
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L ++P L FP+E KQ ++ L N + ++VAFK +TT + +RP G++ P +
Sbjct: 7 LEIEPMY-LQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLILPKSTC 65
Query: 137 IATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVKGGI---DYVPELFDEQKDQVTVERI 193
K + + + P D +S +KF I S+ G+ + E+F ++ V E
Sbjct: 66 -----KVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETK 120
Query: 194 LRVVFL 199
LRV ++
Sbjct: 121 LRVTYV 126
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A OS=Rattus
norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L LDP ++L F + ++L+N S V FK +TTAP+ +RP GV+ PG +
Sbjct: 15 LVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIV 74
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + ++ I + ++ E K ++
Sbjct: 75 TVSVM----------LQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDS 124
Query: 193 ILRVVF 198
LR VF
Sbjct: 125 KLRCVF 130
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A OS=Bos
taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L LDP +L F + ++L+N S V FK +TTAP+ +RP G++ PG ++
Sbjct: 15 LVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTV 74
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + ++ I + ++ E K ++
Sbjct: 75 TVSVM----------LQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDS 124
Query: 193 ILRVVF 198
LR VF
Sbjct: 125 KLRCVF 130
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A OS=Mus
musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L LDP ++L F + ++L+N S V FK +TTAP+ +RP G++ PG +
Sbjct: 15 LVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIV 74
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + ++ I + ++ E K ++
Sbjct: 75 TVSVM----------LQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDS 124
Query: 193 ILRVVF 198
LR VF
Sbjct: 125 KLRCVF 130
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A OS=Pongo
abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L LDP +L F + ++L+N S V FK +TTAP+ +RP G++ PG ++
Sbjct: 15 LVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTV 74
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + ++ + ++ E K ++
Sbjct: 75 TVSVM----------LQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDS 124
Query: 193 ILRVVF 198
LR VF
Sbjct: 125 KLRCVF 130
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A OS=Homo
sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L LDP +L F + ++L+N S V FK +TTAP+ +RP G++ PG ++
Sbjct: 15 LVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTV 74
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + ++ + ++ E K ++
Sbjct: 75 TVSVM----------LQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDS 124
Query: 193 ILRVVF 198
LR VF
Sbjct: 125 KLRCVF 130
>sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC17C9.12 PE=1 SV=2
Length = 319
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 22/138 (15%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
+ L+ + + FP + + + L+NT+ + FK +TTAPK +RP GG + ++
Sbjct: 1 MALECDSTIVFPRPLTRLVKCDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAV 60
Query: 137 IATVFKFVEAPENNERQPLDQ------KSKDKFKIMSLKVK---GGIDYVPELFDEQKDQ 187
V QPLD K +DKF + S ++K G+D + +++ +
Sbjct: 61 SVEVI----------LQPLDHEPAPGTKCRDKFLVQSTELKPELQGMD-IADIWTQVSKA 109
Query: 188 VTVERILRVVFLNAERPS 205
ER +R V+ +E PS
Sbjct: 110 NISERKIRCVY--SEGPS 125
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B OS=Bos
taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L L+P + L F + ++L N + +V FK +TTAP+ +RP G++ G SI
Sbjct: 8 LSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASI 67
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + S+ + ++ E K + ++
Sbjct: 68 NVSVM----------LQPFDYDPNEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPEDLMDS 117
Query: 193 ILRVVF-LNAERPSP 206
LR VF L AE P
Sbjct: 118 KLRCVFELPAENDKP 132
>sp|Q6Q595|SCS22_YEAST Vesicle-associated membrane protein-associated protein SCS22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS22 PE=1 SV=2
Length = 175
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 12/126 (9%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
+R+ P L F KQ+ ++L+N + V FK +T+AP +RP ++ +S+
Sbjct: 1 MRIVPEK-LVFKAPLNKQSTEYIKLENDGEKRVIFKVRTSAPTKYCVRPNVAIIGAHESV 59
Query: 137 IATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVKGGIDYV---------PELFDEQKDQ 187
+ F+ P++ +DQK +DKF I++L + V P L ++ KD
Sbjct: 60 NVQIV-FLGLPKSTADDEMDQK-RDKFLIVTLPIPAAYQNVEDGELLSDWPNLEEQYKDD 117
Query: 188 VTVERI 193
+ ++I
Sbjct: 118 IVFKKI 123
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B OS=Sus
scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L L+P + L F + ++L N + +V FK +TTAP+ +RP G++ G SI
Sbjct: 8 LSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASI 67
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + S+ + + E K + ++
Sbjct: 68 NVSVM----------LQPFDYDPNEKSKHKFMVQSMFAPADTSDMEAAWKEAKPEDLMDS 117
Query: 193 ILRVVF-LNAERPSP 206
LR VF L AE P
Sbjct: 118 KLRCVFELPAENDKP 132
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C OS=Homo
sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L L+P + L F + ++L N + +V FK +TTAP+ +RP G++ G SI
Sbjct: 8 LSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASI 67
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + S+ + ++ E K + ++
Sbjct: 68 NVSVM----------LQPFDYDPNEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPEDLMDS 117
Query: 193 ILRVVF-LNAERPSP 206
LR VF L AE P
Sbjct: 118 KLRCVFELPAENDKP 132
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein SCS2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS2 PE=1 SV=3
Length = 244
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 93 KQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI-IATVFKFVEAPENNE 151
+Q+ + N S +AFK +TTAPK +RP V+APG++I + +F + E
Sbjct: 19 EQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQVQVIFLGL-----TE 73
Query: 152 RQPLDQKSKDKFKIMSL 168
D K +DKF +++L
Sbjct: 74 EPAADFKCRDKFLVITL 90
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B OS=Rattus
norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L L+P + L F + ++L N + +V FK +TTAP+ +RP GV+ G S+
Sbjct: 8 LSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGASL 67
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + S+ + ++ E K + ++
Sbjct: 68 NVSVM----------LQPFDYDPNEKSKHKFMVQSMFAPPDTSDMEAVWKEAKPEDLMDS 117
Query: 193 ILRVVF-LNAERPSP 206
LR VF L AE P
Sbjct: 118 KLRCVFELPAENAKP 132
>sp|Q8NHP6|MSPD2_HUMAN Motile sperm domain-containing protein 2 OS=Homo sapiens GN=MOSPD2
PE=1 SV=1
Length = 518
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L + P+ LYF + ++ + L N +K+ VAFK +TTAP+ ++P PG S+
Sbjct: 328 LHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGASV 387
Query: 137 IATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVK 171
V +P L ++D+F IM+ +++
Sbjct: 388 DIVV-----SPHGG----LTVSAQDRFLIMAAEME 413
>sp|Q9CWP6|MSPD2_MOUSE Motile sperm domain-containing protein 2 OS=Mus musculus GN=Mospd2
PE=1 SV=2
Length = 518
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L + P+ LYF + ++ + L N +K+ VAFK +TTAP+ ++P PG SI
Sbjct: 328 LHISPAEELYFGSIESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGASI 387
Query: 137 IATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVK 171
V +P L ++D+F IM+ +++
Sbjct: 388 DIIV-----SPHGG----LTVSAQDRFLIMAAEME 413
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B OS=Mus
musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L L+P + L F + ++L N + +V FK +TT P+ +RP GV+ G S+
Sbjct: 8 LSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGASL 67
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + S+ + ++ E K + ++
Sbjct: 68 NVSVM----------LQPFDYDPNEKSKHKFMVQSMFAPPDTSDMEAVWKEAKPEDLMDS 117
Query: 193 ILRVVF-LNAERPSP 206
LR VF L AE P
Sbjct: 118 KLRCVFELPAENAKP 132
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding protein
OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L L+P+ L F + ++L N + + FK +TTAPK +RP G+L P SI
Sbjct: 8 LILEPAGELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILEPKTSI 67
Query: 137 IATVFKFVEAPENNERQPL----DQKSKDKFKIMSLKVKGGIDYVPE----LFDEQKDQV 188
V QP ++K+K KF + S+ D+V E L+ + +
Sbjct: 68 AVAVM----------LQPFNYDPNEKNKHKFMVQSMYAP---DHVVESQELLWKDAPPES 114
Query: 189 TVERILRVVF 198
++ LR VF
Sbjct: 115 LMDTKLRCVF 124
>sp|P53022|MSP2_GLORO Major sperm protein 2 OS=Globodera rostochiensis GN=MSP-2 PE=2 SV=2
Length = 126
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 99 VRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
VR+ N + + F F+TT PK M PP GVL P +S+
Sbjct: 31 VRVINPGTNRIGFAFKTTKPKRINMNPPNGVLGPKESV 68
>sp|P53023|MSP3_GLORO Major sperm protein 3 OS=Globodera rostochiensis GN=MSP-3 PE=2 SV=2
Length = 126
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 99 VRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
VR+ N + F F+TT PK M PP GVL P +S+
Sbjct: 31 VRIINPGTKRIGFAFKTTKPKRINMNPPNGVLGPKESV 68
>sp|P53021|MSP1_GLORO Major sperm protein 1 OS=Globodera rostochiensis GN=MSP-1 PE=2 SV=2
Length = 126
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 99 VRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
VR+ N + F F+TT PK M PP GVL P +S+
Sbjct: 31 VRIINPGTKRIGFAFKTTKPKRINMNPPNGVLGPKESV 68
>sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associated protein C16G5.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16G5.05c PE=1 SV=1
Length = 383
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 77 LRLDPSNNLYFPYEP-GKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDS 135
+ ++ S L+F Y P ++ + + N + V FK +TTAPK +RP G + P +
Sbjct: 1 MSVECSGELFF-YPPFTTMSKELISVHNPNPEPVIFKVKTTAPKHYCVRPNSGKIEPKST 59
Query: 136 IIATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVKGG----IDYVPELFDEQKDQ--VT 189
+ V ++A + E D K +DKF I S+ + ++ E + E + Q
Sbjct: 60 VNVQV--LLQAMK--EEPAPDFKCRDKFLIQSMAIGDADTSNVENYHEFWTEMEKQGRSI 115
Query: 190 VERILRVVFLNAERP 204
+R +R V+ + P
Sbjct: 116 FDRKIRCVYSTKQPP 130
>sp|Q21244|MSP63_CAEEL Major sperm protein 63 OS=Caenorhabditis elegans GN=msp-63 PE=2
SV=3
Length = 127
Score = 35.0 bits (79), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 77 LRLDPSNNLYF--PYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGD 134
++ P + F PY+ R +++ N+S + + +TT K + PP GVL P +
Sbjct: 10 IQTQPGTKIVFNAPYDDKHTYR--IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 135 SIIATV----FKFVEAPENNER 152
+++ V F F + NN+R
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q8CBY1|SMAG1_MOUSE Protein Smaug homolog 1 OS=Mus musculus GN=Samd4a PE=1 SV=2
Length = 711
Score = 34.3 bits (77), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 6 WHSRSNSDKKLFGFCPFWQTSTTATPSSSASSTQNLTTSSSNPHVGV-PNSSRPAT-KTV 63
+H R NSD KL G WQ S + SAS+ Q+ + N HV + +SS PAT T+
Sbjct: 177 YHQRQNSDDKLNG----WQNSRDSGICISASNWQDKSLGCENGHVPLYSSSSVPATINTI 232
Query: 64 SYVARSLL-------PPRRRLRLDPSNNL 85
A ++L P +R + L P N+
Sbjct: 233 GTGASTILSGQAHHSPLKRSVSLTPPMNV 261
>sp|Q19832|MSP3_CAEEL Major sperm protein 3 OS=Caenorhabditis elegans GN=msp-3 PE=2 SV=3
Length = 127
Score = 33.9 bits (76), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 99 VRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATV----FKFVEAPENNER 152
+++ N+S + + +TT K + PP GVL P ++++ V F F + NN+R
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q23519|MS152_CAEEL Major sperm protein 152 OS=Caenorhabditis elegans GN=msp-152 PE=2
SV=3
Length = 127
Score = 33.9 bits (76), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 99 VRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATV----FKFVEAPENNER 152
+++ N+S + + +TT K + PP GVL P ++++ V F F + NN+R
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDAFAFGQEDTNNDR 89
>sp|P05634|MSP10_CAEEL Major sperm protein 10/36/56/76 OS=Caenorhabditis elegans GN=msp-10
PE=2 SV=4
Length = 127
Score = 33.9 bits (76), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 99 VRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATV----FKFVEAPENNER 152
+++ N+S + + +TT K + PP GVL P ++++ V F F + NN+R
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDAFAFGQEDTNNDR 89
>sp|P53018|MSP32_CAEEL Major sperm protein 32 OS=Caenorhabditis elegans GN=msp-32 PE=2
SV=1
Length = 190
Score = 33.9 bits (76), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 57/143 (39%), Gaps = 14/143 (9%)
Query: 22 FWQTSTTATPSSSASSTQNLTTSSSNPHVGVPNSSRPATKTVSYVARSLLPPRR------ 75
FW + P S ++ G+ + K + R + P+
Sbjct: 12 FWSAAYAEMPISKFTAYAENAVLPKRKMDGISAYADMPKKIFGGICRYAVMPKNSECRTG 71
Query: 76 RLRLDPSNNLYF--PYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPG 133
++ P + F PY+ K T +++ N+S + + +TT K + PP GVL P
Sbjct: 72 MIQTQPGTKIVFNAPYDD-KHTYH-IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPK 129
Query: 134 DSIIATV----FKFVEAPENNER 152
++++ V F F + NN+R
Sbjct: 130 EAVLLAVSCDAFAFGQEDTNNDR 152
>sp|P53017|MSP19_CAEEL Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142
OS=Caenorhabditis elegans GN=msp-19 PE=1 SV=2
Length = 127
Score = 33.9 bits (76), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 99 VRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATV----FKFVEAPENNER 152
+++ N+S + + +TT K + PP GVL P ++++ V F F + NN+R
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q94053|MSP78_CAEEL Major sperm protein 78 OS=Caenorhabditis elegans GN=msp-78 PE=2
SV=3
Length = 127
Score = 33.9 bits (76), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 99 VRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATV----FKFVEAPENNER 152
+++ N+S + + +TT K + PP GVL P ++++ V F F + NN+R
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q9TVW5|MSP77_CAEEL Major sperm protein 77/79 OS=Caenorhabditis elegans GN=msp-77 PE=2
SV=3
Length = 127
Score = 33.9 bits (76), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 99 VRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATV----FKFVEAPENNER 152
+++ N+S + + +TT K + PP GVL P ++++ V F F + NN+R
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q9UTD0|FOLD_SCHPO Probable folylpolyglutamate synthase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=fol3 PE=3 SV=1
Length = 417
Score = 33.5 bits (75), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 54/138 (39%), Gaps = 23/138 (16%)
Query: 21 PFWQTSTTATPSSSASSTQNLTTSSSN------------PHV--GVPNSSRPATKTVSYV 66
P W T+T +TP QNL + + PHV GV N+S P + V
Sbjct: 221 PNWGTNTFSTPLKGDYQGQNLACAVTALDILSSSFSIMLPHVQNGVKNTSWPGRLDIRSV 280
Query: 67 ARSLLPPRRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPP 126
P + D ++N E K S R N S S V F T + M+
Sbjct: 281 -----PSLGDILFDGAHNKEAAIELAKFVNSQRREHNKSVSWVV-AFTNTKDVTGIMKI- 333
Query: 127 GGVLAPGDSIIATVFKFV 144
+L GD++IAT F V
Sbjct: 334 --LLRKGDTVIATNFSSV 349
>sp|Q17856|MSP55_CAEEL Major sperm protein 55/57 OS=Caenorhabditis elegans GN=msp-55 PE=2
SV=3
Length = 127
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 99 VRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATV----FKFVEAPENNER 152
+++ N+S + + +TT K + PP GVL P ++++ V F F + NN+R
Sbjct: 32 IKVINSSARRIVYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDAFAFGQEDTNNDR 89
>sp|P53019|MSP33_CAEEL Major sperm protein 33 OS=Caenorhabditis elegans GN=msp-33 PE=2
SV=2
Length = 127
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 99 VRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATV----FKFVEAPENNER 152
+++ N+S + + +TT K + PP GVL P +++ V F F + NN+R
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVFLAVSCDAFAFGQEDTNNDR 89
>sp|P53020|MSP38_CAEEL Major sperm protein 38 OS=Caenorhabditis elegans GN=msp-38 PE=2
SV=2
Length = 127
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 77 LRLDPSNNLYF--PYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGD 134
++ P + F PY+ + +++ N+S + + +TT K + PP GV P +
Sbjct: 10 IQTQPGTKIVFNAPYD--DKHTDHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVFDPKE 67
Query: 135 SIIATV----FKFVEAPENNER 152
+++ V F F + NN+R
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q18461|MSP49_CAEEL Major sperm protein 49 OS=Caenorhabditis elegans GN=msp-49 PE=2
SV=3
Length = 127
Score = 32.0 bits (71), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 99 VRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATV----FKFVEAPENNER 152
+++ N+S + + +T K + PP GVL P ++++ V F F + NN+R
Sbjct: 32 IKVINSSARRIGYGIKTINMKRLGVDPPCGVLDPKEAVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q0P5G1|TONSL_BOVIN Tonsoku-like protein OS=Bos taurus GN=TONSL PE=2 SV=1
Length = 1374
Score = 32.0 bits (71), Expect = 3.3, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 21 PFWQTSTTATPSSSASSTQNLTTSSSN-PHVGVPNSSRPATKTVSYVARSLLPPRRRLRL 79
P+ ++ +T + A+S S + P V P P T ++ +LPP R+R+
Sbjct: 878 PYLESWSTPVRADRANSQATEPARSPDVPRVVAPTGENPTT---GHLPGQVLPPPIRVRV 934
Query: 80 DPSNNLYFPYEPGKQTRSAVRL-KNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
+NL+ P ++ S L + ++ H ++ P+ ++ G +LAP D I
Sbjct: 935 RVQDNLFLIPVPHREAHSVAWLAEQAAQRH--YQASGLLPR-LSLQKEGALLAPQDPI 989
>sp|Q95LV5|SMAG1_MACFA Protein Smaug homolog 1 OS=Macaca fascicularis GN=SAMD4A PE=2 SV=2
Length = 718
Score = 30.4 bits (67), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 6 WHSRSNSDKKLFGFCPFWQTSTTATPSSSASSTQNLTTSSSNPHVGVPNSS 56
+H R NSD KL G WQ S + +AS+ Q+ + N HV + +SS
Sbjct: 177 YHQRQNSDDKLNG----WQNSRDSGICINASNWQDKSMGCENGHVPLYSSS 223
>sp|Q9UPU9|SMAG1_HUMAN Protein Smaug homolog 1 OS=Homo sapiens GN=SAMD4A PE=1 SV=3
Length = 718
Score = 30.4 bits (67), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 6 WHSRSNSDKKLFGFCPFWQTSTTATPSSSASSTQNLTTSSSNPHVGVPNSS 56
+H R NSD KL G WQ S + +AS+ Q+ + N HV + +SS
Sbjct: 177 YHQRQNSDDKLNG----WQNSRDSGICINASNWQDKSMGCENGHVPLYSSS 223
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,825,143
Number of Sequences: 539616
Number of extensions: 3117673
Number of successful extensions: 12015
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 11494
Number of HSP's gapped (non-prelim): 464
length of query: 210
length of database: 191,569,459
effective HSP length: 112
effective length of query: 98
effective length of database: 131,132,467
effective search space: 12850981766
effective search space used: 12850981766
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)