Query 028355
Match_columns 210
No_of_seqs 164 out of 649
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 16:50:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028355.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028355hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cri_A Vesicle-associated memb 100.0 7E-36 2.4E-40 240.8 17.9 128 73-206 11-138 (147)
2 1z9l_A Vesicle-associated memb 100.0 6.9E-35 2.4E-39 229.4 17.1 121 73-199 7-127 (128)
3 1wic_A Hypothetical protein ri 100.0 5E-35 1.7E-39 237.6 13.1 128 73-209 15-147 (152)
4 1msp_A MSP, major sperm protei 100.0 3.6E-31 1.2E-35 208.6 15.9 118 75-199 7-125 (126)
5 1row_A SSP-19, MSP-domain prot 100.0 3.4E-28 1.2E-32 187.9 13.7 104 77-197 3-106 (109)
6 1m1s_A WR4; structural genomic 99.9 4.7E-27 1.6E-31 183.5 14.7 105 76-197 10-114 (116)
7 2ys4_A Hydrocephalus-inducing 98.2 7.3E-06 2.5E-10 62.6 8.5 65 75-143 24-89 (122)
8 2e6j_A Hydin protein; PAPD, st 97.9 4.9E-05 1.7E-09 56.4 8.0 68 75-143 8-79 (112)
9 3qbt_B Inositol polyphosphate 97.8 0.00012 3.9E-09 57.9 9.9 68 75-143 25-99 (140)
10 3qis_A Inositol polyphosphate 97.3 0.00083 2.8E-08 60.5 9.6 69 75-144 28-103 (366)
11 2qsv_A Uncharacterized protein 96.3 0.016 5.4E-07 48.2 8.7 65 77-143 3-68 (220)
12 2qsv_A Uncharacterized protein 95.1 0.082 2.8E-06 43.8 8.4 66 75-143 118-184 (220)
13 3q48_A Chaperone CUPB2; IG fol 91.5 3.9 0.00013 34.9 13.0 64 76-143 29-102 (257)
14 2co7_B SAFB chaperone, putativ 88.8 3.7 0.00013 34.2 10.3 63 77-143 14-81 (221)
15 2xg5_A PAPD, chaperone protein 87.8 11 0.00036 31.3 13.8 63 77-143 2-72 (218)
16 1klf_A FIMC chaperone, chapero 86.8 11 0.00037 30.9 11.9 62 77-142 2-69 (205)
17 4djm_A DRAB; chaperone, PILI; 85.1 6 0.0002 33.4 9.7 64 76-143 23-91 (239)
18 1l4i_A SFAE protein; periplasm 84.3 16 0.00054 29.9 12.4 63 77-143 2-71 (206)
19 3rfr_A PMOB; membrane, oxidore 77.8 5.9 0.0002 36.3 7.3 65 75-143 282-367 (419)
20 2r39_A FIXG-related protein; s 74.9 11 0.00037 27.9 7.1 61 84-144 21-83 (118)
21 1yew_A Particulate methane mon 71.4 12 0.0004 34.0 7.5 69 73-143 246-335 (382)
22 3jt0_A Lamin-B1; structural ge 70.7 7.2 0.00025 30.7 5.4 41 98-138 39-84 (144)
23 4ay0_A Chaperone protein CAF1M 66.7 53 0.0018 27.0 13.0 63 77-143 14-83 (218)
24 3idu_A Uncharacterized protein 63.5 17 0.00058 27.7 6.1 51 91-142 31-82 (127)
25 2g30_A AP-2 complex subunit be 62.5 7.2 0.00025 33.3 4.2 64 74-143 41-110 (258)
26 3gfu_C Chaperone protein FAEE; 60.0 74 0.0025 26.4 14.8 63 77-143 2-71 (224)
27 3zy7_A AP-1 complex subunit ga 50.5 75 0.0026 23.7 9.5 68 94-170 30-103 (122)
28 3hs8_A Adaptor protein complex 44.5 49 0.0017 28.3 6.5 57 92-148 67-130 (273)
29 3mnm_A ADP-ribosylation factor 40.7 1.1E+02 0.0038 22.8 9.0 51 92-142 30-86 (123)
30 3hn9_A Lamin-B1; structural ge 36.8 39 0.0013 25.5 4.2 40 98-138 26-71 (123)
31 3zy7_A AP-1 complex subunit ga 35.5 38 0.0013 25.3 3.9 55 62-116 44-99 (122)
32 2huh_A Putative DNA mismatch r 32.7 1.2E+02 0.0042 23.8 6.6 66 96-173 29-94 (147)
33 3e38_A Two-domain protein cont 32.3 1.3E+02 0.0045 26.3 7.5 65 97-173 270-334 (343)
34 2xzz_A Protein-glutamine gamma 28.9 1.6E+02 0.0056 21.2 6.5 48 92-143 19-72 (102)
35 4hci_A Cupredoxin 1; structura 27.0 1.5E+02 0.0053 20.3 6.6 52 78-142 24-75 (100)
36 1ifr_A Lamin A/C; immunoglobul 25.8 65 0.0022 24.2 3.7 41 98-138 20-66 (121)
37 1gyu_A Adapter-related protein 24.9 69 0.0023 24.6 3.8 48 68-115 69-116 (140)
38 3o0l_A Uncharacterized protein 24.5 1.3E+02 0.0044 22.1 5.2 51 91-141 36-93 (112)
39 1wm3_A Ubiquitin-like protein 23.9 74 0.0025 21.1 3.4 21 98-118 3-23 (72)
40 3vta_A Cucumisin; subtilisin-l 23.8 2.4E+02 0.0081 26.4 8.0 50 94-143 538-590 (621)
41 1gyu_A Adapter-related protein 22.9 2.5E+02 0.0086 21.3 9.6 69 93-170 47-121 (140)
42 2e9g_A AP-1 complex subunit ga 22.9 67 0.0023 24.2 3.3 55 62-116 53-108 (131)
43 2lll_A Lamin-B2; immunoglobuli 21.5 82 0.0028 24.4 3.6 41 98-138 35-81 (139)
44 1qhq_A Protein (auracyanin); e 21.4 69 0.0024 23.6 3.1 62 76-142 27-112 (140)
45 1cuo_A Protein (azurin ISO-2); 21.1 82 0.0028 23.6 3.5 62 76-142 12-99 (129)
46 2npi_A Protein CLP1; CLP1-PCF1 20.3 39 0.0014 30.8 1.8 47 74-124 38-84 (460)
No 1
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=100.00 E-value=7e-36 Score=240.84 Aligned_cols=128 Identities=27% Similarity=0.430 Sum_probs=115.4
Q ss_pred CCCcEEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEccCCCcceeecCCeeeeCCCCeEEEEEEeeecCCCCcCC
Q 028355 73 PRRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKFVEAPENNER 152 (210)
Q Consensus 73 ~~~~L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKTTaP~~Y~VRP~~GiL~Pges~~I~Vtl~~~~p~~~e~ 152 (210)
+.++|.|+|.++|.|.+++++++++.|+|+|+++.+||||||||+|++|+|||+.|+|+||+++.|.|+|+ ++..
T Consensus 11 ~~~~L~i~P~~~L~F~~p~~~~~~~~l~L~N~s~~~VaFKVKTT~p~~y~VrP~~GiI~P~~s~~v~V~l~---~~~~-- 85 (147)
T 2cri_A 11 HEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVMLQ---PFDY-- 85 (147)
T ss_dssp CCCCSEEESSSEEEEECCSSSCCCEEEEEECCSSSCEEEEEEESCTTSEEEESSEEECCTTCEEEEEEEEC---CCCC--
T ss_pred CCCeEEECCCCeEEEeCCCCceEEEEEEEECCCCCcEEEEEECCCCccEEEcCCCcEECCCCeEEEEEEEC---CCcC--
Confidence 45789999988999999999999999999999999999999999999999999999999999999999996 4322
Q ss_pred CCCCCCCCCeEEEEEEEeCCCCCChhhhhhccCCCceEEEEEEEEEecCCCCCC
Q 028355 153 QPLDQKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVERILRVVFLNAERPSP 206 (210)
Q Consensus 153 ~p~~~~~kDKFlVqs~~v~~~~d~~~~iwk~~~k~~i~e~kLrV~f~~p~~~s~ 206 (210)
.+..+++|||+||++.++++.+++.++|++.++..++++||||+|+.|..+..
T Consensus 86 -~p~~~~kDKFlVqs~~~~~~~~d~~~~wk~~~~~~i~e~kLrv~f~~p~~~~~ 138 (147)
T 2cri_A 86 -DPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDSKLRCVFEMPNENDK 138 (147)
T ss_dssp -CTTCCSCCCEEEEEEECCTTCCCHHHHHHHSCTTTCEEEEEEEEEECSCCSSC
T ss_pred -CccccCCCEEEEEEEEcCCCcccHHHHhhcCCCCceEEEEEEEEEecCCCCcc
Confidence 23578999999999999998878899999998899999999999998765443
No 2
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=100.00 E-value=6.9e-35 Score=229.40 Aligned_cols=121 Identities=30% Similarity=0.460 Sum_probs=110.6
Q ss_pred CCCcEEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEccCCCcceeecCCeeeeCCCCeEEEEEEeeecCCCCcCC
Q 028355 73 PRRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKFVEAPENNER 152 (210)
Q Consensus 73 ~~~~L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKTTaP~~Y~VRP~~GiL~Pges~~I~Vtl~~~~p~~~e~ 152 (210)
..++|.|+|.++|.|.+++++++++.|+|+|+++.+||||||||+|++|+|||+.|+|+||+++.|.|+++ ++..
T Consensus 7 ~~~~L~i~P~~~l~F~~p~~~~~~~~l~L~N~s~~~vaFKVKTT~p~~y~VrP~~G~i~P~~s~~v~V~~~---~~~~-- 81 (128)
T 1z9l_A 7 HEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIVTVSVMLQ---PFDY-- 81 (128)
T ss_dssp CCCCSEEESSSEEEEESCCSSCEEEEEEEECCSSSCEEEEEEESCGGGEEEESCEEEECTTCEEEEEEEEC---CCCC--
T ss_pred CCCeEEECCCCeEEEcCCCCceEEEEEEEECCCCCeEEEEEECCCCCceEEeCCCcEECCCCeEEEEEEEC---cCcC--
Confidence 35689999988999999999999999999999999999999999999999999999999999999999996 3322
Q ss_pred CCCCCCCCCeEEEEEEEeCCCCCChhhhhhccCCCceEEEEEEEEEe
Q 028355 153 QPLDQKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVERILRVVFL 199 (210)
Q Consensus 153 ~p~~~~~kDKFlVqs~~v~~~~d~~~~iwk~~~k~~i~e~kLrV~f~ 199 (210)
.+..+++|||+||++.++++.+++.++|++.++..++++||||+|.
T Consensus 82 -~p~~~~~dkF~V~s~~~~~~~~~~~~~w~~~~~~~i~e~kLrv~f~ 127 (128)
T 1z9l_A 82 -DPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDSKLRCVFE 127 (128)
T ss_dssp -CTTCCCCCEEEEEEEECCTTCSCHHHHHHSCCGGGCEEEEEEEEEE
T ss_pred -CcccccCCEEEEEEEECCCCcchHHHHhhcCCCCceEEEEEEEEEe
Confidence 2346899999999999999887899999999989999999999995
No 3
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=100.00 E-value=5e-35 Score=237.59 Aligned_cols=128 Identities=26% Similarity=0.378 Sum_probs=112.2
Q ss_pred CCCcEEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEccCCCcceeecCCeeeeCCCCeEEEEEEeeecCCCCcCC
Q 028355 73 PRRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKFVEAPENNER 152 (210)
Q Consensus 73 ~~~~L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKTTaP~~Y~VRP~~GiL~Pges~~I~Vtl~~~~p~~~e~ 152 (210)
++++|.|+|.++|+|.+++++++++.|+|+|+++.+||||||||+|++|+|||+.|+|+||++++|.|+|+ ++ .
T Consensus 15 ~~~~L~i~P~~~L~F~~~~~~~~~~~l~L~N~s~~~VaFKVKTT~p~~y~VrP~~GiI~P~~s~~V~V~lq---~~-~-- 88 (152)
T 1wic_A 15 KGPLLHISPAEELYFGSIESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGASIDIIVSPH---GG-L-- 88 (152)
T ss_dssp CCSSBCBBSSSCBCCCCSSSSCCCEEEEEEBCSSSCEEEEEEESCTTTEEEESSEEEECTTCEEEEEEEEC---SS-S--
T ss_pred CCCeEEECCCCeEEEeCCCCceEEEEEEEEcCCCCeEEEEEECCCCCceeecCCCcEECCCCeEEEEEEec---Cc-c--
Confidence 35789999988999999999999999999999999999999999999999999999999999999999996 33 1
Q ss_pred CCCCCCCCCeEEEEEEEeC--CCC--CChhhhhhccCCCceEEEEEEEEEecCC-CCCCCCC
Q 028355 153 QPLDQKSKDKFKIMSLKVK--GGI--DYVPELFDEQKDQVTVERILRVVFLNAE-RPSPVSS 209 (210)
Q Consensus 153 ~p~~~~~kDKFlVqs~~v~--~~~--d~~~~iwk~~~k~~i~e~kLrV~f~~p~-~~s~~~~ 209 (210)
...++|||+||++.++ ++. +++.++|++..+..++++||||+|+++. ++|++++
T Consensus 89 ---~~~~kDKFlVqs~~v~~~~~~~~~d~~~~wk~~~~~~i~e~kLrv~f~~~~~p~s~~~~ 147 (152)
T 1wic_A 89 ---TVSAQDRFLIMAAEMEQSSGTGPAELSQFWKEVPRNKVMEHRLRCHTVESSKPNSLMLS 147 (152)
T ss_dssp ---CCCSSCCEEEEEEECCSSCCCSHHHHHHHHHHSCTTTCEEEEECBCCCCSCSSSSSCCC
T ss_pred ---cCCCCCEEEEEEEEcCCcCCCChhhHHHHHhccCCCceEEEEEEEEECCCCCCCCcccc
Confidence 1378999999999998 443 4688999999888999999999999664 4455443
No 4
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=99.97 E-value=3.6e-31 Score=208.57 Aligned_cols=118 Identities=15% Similarity=0.243 Sum_probs=100.7
Q ss_pred CcEEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEccCCCcceeecCCeeeeCCCCeEEEEEEeeecCCCCcCCCC
Q 028355 75 RRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKFVEAPENNERQP 154 (210)
Q Consensus 75 ~~L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKTTaP~~Y~VRP~~GiL~Pges~~I~Vtl~~~~p~~~e~~p 154 (210)
..|.++|.++|.|++++++++++.|+|+|+++++||||||||+|++|+|||++|+|+||+++.|.|+|++ +..+ +
T Consensus 7 ~~l~i~P~~~l~F~~p~~~~~~~~l~l~N~s~~~vaFKVKTT~p~~y~VrP~~Gii~P~~s~~v~V~~q~---~~~~--~ 81 (126)
T 1msp_A 7 GDINTQPSQKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLSVDPPCGVLDPKEKVLMAVSCDT---FNAA--T 81 (126)
T ss_dssp CCEEEESSSCEEEESCCSSCCCEEEEEEECSSSCEEEEEEESCTTTEEEESCEEEECTTCEEEEEEEECC---CCGG--G
T ss_pred CeEEEcCCCeEEEcCcCCcceEEEEEEECCCCCeEEEEEEcCCCCcEEEECCCeEECCCCEEEEEEEecC---CCCC--C
Confidence 4699999999999999999999999999999999999999999999999999999999999999999973 3222 2
Q ss_pred CCCCCCCeEEEEEEEeCCCC-CChhhhhhccCCCceEEEEEEEEEe
Q 028355 155 LDQKSKDKFKIMSLKVKGGI-DYVPELFDEQKDQVTVERILRVVFL 199 (210)
Q Consensus 155 ~~~~~kDKFlVqs~~v~~~~-d~~~~iwk~~~k~~i~e~kLrV~f~ 199 (210)
. ...+|||+||++.++++. +++.+.|.+.++ .+..++|+|.|-
T Consensus 82 ~-~~~kDKf~Vq~~~~p~~~~~~~~~~wf~~d~-~~~~k~L~V~Yn 125 (126)
T 1msp_A 82 E-DLNNDRITIEWTNTPDGAAKQFRREWFQGDG-MVRRKNLPIEYN 125 (126)
T ss_dssp S-CCSSCEEEEEEEECCTTCCSSCCTHHHHSSS-CCEEEEEEEEEE
T ss_pred C-ccCCCEEEEEEEECCCCcchhhhHHhhcCCC-ceEEEEEEEEec
Confidence 2 345999999999999886 245555555443 578999999984
No 5
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=99.96 E-value=3.4e-28 Score=187.86 Aligned_cols=104 Identities=15% Similarity=0.173 Sum_probs=91.4
Q ss_pred EEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEccCCCcceeecCCeeeeCCCCeEEEEEEeeecCCCCcCCCCCC
Q 028355 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKFVEAPENNERQPLD 156 (210)
Q Consensus 77 L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKTTaP~~Y~VRP~~GiL~Pges~~I~Vtl~~~~p~~~e~~p~~ 156 (210)
|.|+|. +|.|.++.+ .+.|+|+|+++++||||||||+|++|||||+.|+|+||++++|.|+++ ++
T Consensus 3 L~i~P~-~l~F~~~~~---~~~l~L~N~t~~~vaFKVKtT~p~~y~VrP~~G~I~P~~~~~i~I~~q---~~-------- 67 (109)
T 1row_A 3 LTADPP-ACTVPAAGV---SSTHKLVNGGAEKIVFKIKSSNNNEYRIAPVFGFVDPSGSKDVVITRT---AG-------- 67 (109)
T ss_dssp CEEESS-SEEEETTCE---EEEEEEEECSSSCEEEEEEESCSSSEEEECSEEEECTTEEEEEEEEEC---SC--------
T ss_pred EEEECC-EeEEeCCCC---eEEEEEEcCCCCeEEEEEEeCCCCceEEcCCceEECCCCeEEEEEEeC---CC--------
Confidence 899997 699998743 599999999999999999999999999999999999999999999996 32
Q ss_pred CCCCCeEEEEEEEeCCCCCChhhhhhccCCCceEEEEEEEE
Q 028355 157 QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVERILRVV 197 (210)
Q Consensus 157 ~~~kDKFlVqs~~v~~~~d~~~~iwk~~~k~~i~e~kLrV~ 197 (210)
..++|||+||++.++++..++.++|++.... .+.+|++.
T Consensus 68 ~~~~dKflvq~~~~~~~~~d~~~~fk~~~~~--g~~~i~l~ 106 (109)
T 1row_A 68 APKEDKLVVHFASAPADATDAQAAFVAVAPA--GTVTIPMS 106 (109)
T ss_dssp CCEEEEEEEEEEECCTTCSCHHHHHTTCCCC--EEEEEEEE
T ss_pred CCCCCEEEEEEEECCCCCCCHHHHhhcCCCC--ceEEEEEE
Confidence 2378999999999998877889999997654 56677664
No 6
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=99.95 E-value=4.7e-27 Score=183.52 Aligned_cols=105 Identities=21% Similarity=0.321 Sum_probs=92.7
Q ss_pred cEEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEccCCCcceeecCCeeeeCCCCeEEEEEEeeecCCCCcCCCCC
Q 028355 76 RLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKFVEAPENNERQPL 155 (210)
Q Consensus 76 ~L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKTTaP~~Y~VRP~~GiL~Pges~~I~Vtl~~~~p~~~e~~p~ 155 (210)
++.++|. +|.|+++.| .+.|+|+|+++.+||||||||+|++|||||+.|+|+||++++|.|+++ ++ +
T Consensus 10 ~~~~~p~-~l~F~~~gg---~~~l~L~N~t~~~vAFKVKtT~p~~YrVrP~~G~I~Pg~~~~I~I~~q---~~-----~- 76 (116)
T 1m1s_A 10 MINVDPP-TGNYPATGG---NSTHNITSESDSRLAFKVKSSNNEHYRVRPVYGFVDAKGKSKLDINRL---PG-----P- 76 (116)
T ss_dssp SEEEESS-EEEECTTCE---EEEEEEEECSSSEEEEEEEESCTTTEEEECSEEEECTTCEEEEEEEEC---SC-----C-
T ss_pred eeecCCC-eEEEecCCC---EEEEEEECCCCCeEEEEEEecCCCceEEcCCceEECCCCeEEEEEEeC---CC-----C-
Confidence 6889995 999997643 699999999999999999999999999999999999999999999996 32 1
Q ss_pred CCCCCCeEEEEEEEeCCCCCChhhhhhccCCCceEEEEEEEE
Q 028355 156 DQKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVERILRVV 197 (210)
Q Consensus 156 ~~~~kDKFlVqs~~v~~~~d~~~~iwk~~~k~~i~e~kLrV~ 197 (210)
.++|||+||++.++++..++.++|++..+ ..+.+|++.
T Consensus 77 --~k~DKflVq~~~~~~d~~d~~~~fk~~~~--~g~~~i~l~ 114 (116)
T 1m1s_A 77 --PKEDKIVIQYAEVPAEETDPMAPFKAGAQ--QGEIIVKLI 114 (116)
T ss_dssp --SCEEEEEEEEEEECTTCCCTTHHHHTTCC--CEEEEEEEE
T ss_pred --CCCCEEEEEEEECCCCCCCHHHHHhcCCC--CceEEEEEE
Confidence 36899999999999877778999999765 478888764
No 7
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.17 E-value=7.3e-06 Score=62.64 Aligned_cols=65 Identities=22% Similarity=0.295 Sum_probs=55.1
Q ss_pred CcEEecCCCceEeeCC-CCCeeEEEEEEECCCCCcEEEEEccCCCcceeecCCeeeeCCCCeEEEEEEee
Q 028355 75 RRLRLDPSNNLYFPYE-PGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKF 143 (210)
Q Consensus 75 ~~L~i~P~~eL~F~~~-~~k~v~~~LtL~N~S~~~VAFKVKTTaP~~Y~VRP~~GiL~Pges~~I~Vtl~ 143 (210)
..|.+ | +.|.|..- -+...+..|.|+|.++.++.|++++. .-|.|.|..|.|+||+++.|.|+..
T Consensus 24 ~~l~~-p-~~l~fg~~~v~~~~~~~~~l~N~g~~~~~f~~~~~--~~F~i~P~~g~L~pg~~~~i~V~F~ 89 (122)
T 2ys4_A 24 AILDF-P-DKLNFSTCPVKYSTQKILLVRNIGNKNAVFHIKTC--RPFSIEPAIGTLNVGESMQLEVEFE 89 (122)
T ss_dssp CCCCC-C-SEECCCSEESSSCEEEEEEEECCSSSCEEEEEECC--TTEEEESSEEEECTTCEEEEEEEEC
T ss_pred cEECC-C-CeeecCCeecCCeEEEEEEEEECCCCCEEEEEecC--CCeEEECCcCEECCCCEEEEEEEEE
Confidence 34555 5 58888663 46677899999999999999999975 4699999999999999999999985
No 8
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.88 E-value=4.9e-05 Score=56.36 Aligned_cols=68 Identities=12% Similarity=0.146 Sum_probs=57.1
Q ss_pred CcEEecCCCceEeeCC-CCCeeEEEEEEECCCCCcEEEEEccCCC---cceeecCCeeeeCCCCeEEEEEEee
Q 028355 75 RRLRLDPSNNLYFPYE-PGKQTRSAVRLKNTSKSHVAFKFQTTAP---KSCYMRPPGGVLAPGDSIIATVFKF 143 (210)
Q Consensus 75 ~~L~i~P~~eL~F~~~-~~k~v~~~LtL~N~S~~~VAFKVKTTaP---~~Y~VRP~~GiL~Pges~~I~Vtl~ 143 (210)
..+.+++. .|.|-.- .+...+..++|+|+++.++.|++..... ..|.+.|..|.|+||++..|.|++.
T Consensus 8 P~i~~~~~-~ldFG~v~~g~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i~pg~~~~i~V~f~ 79 (112)
T 2e6j_A 8 PKIHFNFE-LLDIGKVFTGSAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGIIEPSGVQAIQISFS 79 (112)
T ss_dssp CSEEESCS-EEEEEEEESSCCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEECTTBCCEEEEEEC
T ss_pred CEEEECcc-cEecEeEEECCEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEECCCCEEEEEEEEE
Confidence 45888884 7888653 4777889999999999999999964221 4699999999999999999999995
No 9
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=97.83 E-value=0.00012 Score=57.85 Aligned_cols=68 Identities=15% Similarity=0.251 Sum_probs=57.6
Q ss_pred CcEEecCCCceEeeC-CCCCeeEEEEEEECCCCCcEEEEEccC------CCcceeecCCeeeeCCCCeEEEEEEee
Q 028355 75 RRLRLDPSNNLYFPY-EPGKQTRSAVRLKNTSKSHVAFKFQTT------APKSCYMRPPGGVLAPGDSIIATVFKF 143 (210)
Q Consensus 75 ~~L~i~P~~eL~F~~-~~~k~v~~~LtL~N~S~~~VAFKVKTT------aP~~Y~VRP~~GiL~Pges~~I~Vtl~ 143 (210)
.-+.+++ .+|.|-. .+++..+..|+|+|++.-+.-|++.-. .+.-+.|.|..|.|.||+++.|.|++.
T Consensus 25 P~i~v~~-~~ldFG~v~~~~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~ 99 (140)
T 3qbt_B 25 PSLELSR-REFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVY 99 (140)
T ss_dssp CCEEESC-CEEEEEEECBTCCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEEC
T ss_pred CceEeee-eeEEeeeceeeeeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCcccccCCCCeeEEEEEEE
Confidence 4577888 4999975 367778899999999999999998742 334588999999999999999999986
No 10
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=97.34 E-value=0.00083 Score=60.49 Aligned_cols=69 Identities=16% Similarity=0.254 Sum_probs=57.7
Q ss_pred CcEEecCCCceEeeC-CCCCeeEEEEEEECCCCCcEEEEEccCCC------cceeecCCeeeeCCCCeEEEEEEeee
Q 028355 75 RRLRLDPSNNLYFPY-EPGKQTRSAVRLKNTSKSHVAFKFQTTAP------KSCYMRPPGGVLAPGDSIIATVFKFV 144 (210)
Q Consensus 75 ~~L~i~P~~eL~F~~-~~~k~v~~~LtL~N~S~~~VAFKVKTTaP------~~Y~VRP~~GiL~Pges~~I~Vtl~~ 144 (210)
.-+.|++ .+|.|-. .++...+..|+|+|++.-++.|++..... .-+.|.|..|.|.||+++.|.|++..
T Consensus 28 P~v~v~~-~~idFg~v~~~~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l~Pge~~~i~l~~~v 103 (366)
T 3qis_A 28 PSLELSR-REFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV 103 (366)
T ss_dssp CCEEESC-SEEEEEEECBTCCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB
T ss_pred CeEEEec-CeEEeeeeeeCCeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEECCCCEEEEEEEEEE
Confidence 5678888 4999964 46788899999999999999999975422 22679999999999999999999964
No 11
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=96.33 E-value=0.016 Score=48.19 Aligned_cols=65 Identities=15% Similarity=0.179 Sum_probs=55.7
Q ss_pred EEecCCCceEeeCC-CCCeeEEEEEEECCCCCcEEEEEccCCCcceeecCCeeeeCCCCeEEEEEEee
Q 028355 77 LRLDPSNNLYFPYE-PGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKF 143 (210)
Q Consensus 77 L~i~P~~eL~F~~~-~~k~v~~~LtL~N~S~~~VAFKVKTTaP~~Y~VRP~~GiL~Pges~~I~Vtl~ 143 (210)
|++++ +.+.|..- .|+.....++++|+++.++-++.-.. |..+.+++..+.|+||++..|.|++.
T Consensus 3 i~~~~-~~idFg~v~~g~~~~~~~~i~N~g~~pl~i~~~~~-p~~~~~~~~~~~I~PG~~g~I~vt~~ 68 (220)
T 2qsv_A 3 LQVSN-ARLLFPISMPEDEGVVRLVVNNTDESDLQVAVVSL-PSFVSLDDRAFRLQAREPRELNLSLA 68 (220)
T ss_dssp EEESC-SEEECCSBCTTCCCEEEEEEEECSSSCEEEEEEEC-CTTEECSCCEEEECSSSCEEEEEEEC
T ss_pred eEEec-CeeEcccccCCCcceEEEEEEeCCCCceEEEeccC-CCceEeeeCcceeCCCCceEEEEEEc
Confidence 88999 59999763 45666789999999999999987543 77888899999999999999999995
No 12
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=95.14 E-value=0.082 Score=43.80 Aligned_cols=66 Identities=17% Similarity=0.236 Sum_probs=55.9
Q ss_pred CcEEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEE-EEccCCCcceeecCCeeeeCCCCeEEEEEEee
Q 028355 75 RRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAF-KFQTTAPKSCYMRPPGGVLAPGDSIIATVFKF 143 (210)
Q Consensus 75 ~~L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAF-KVKTTaP~~Y~VRP~~GiL~Pges~~I~Vtl~ 143 (210)
..|.++ . .+.|-.-.|...+..++|+|+++.++.+ +|++++ +-..+.+..+.|+||++..|.|++.
T Consensus 118 ~~i~~~-~-~~dfG~i~g~~~~~~f~i~N~G~~pL~I~~v~~sc-gct~~~~~~~~i~PGe~~~i~v~~~ 184 (220)
T 2qsv_A 118 GVMELS-T-YLDMGQLDGETTKAAIEIRNVGAGPLRLHSVTTRN-PALTAVPDRTEIKPGGSTLLRIAVD 184 (220)
T ss_dssp CCEECC-C-EEEEEECTTSCEEEEEEEEECSSSCEEEEEEEECS-TTEEEEESCSEECTTCEEEEEEEEC
T ss_pred CEEEEE-e-EEeeeccCCCeEEEEEEEEECCCCCEEEEEEEeCC-CCEeeecCCccCCCCCEEEEEEEEe
Confidence 458888 4 8888743377888999999999998877 888765 6888899999999999999999995
No 13
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=91.54 E-value=3.9 Score=34.95 Aligned_cols=64 Identities=17% Similarity=0.238 Sum_probs=47.7
Q ss_pred cEEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEccCC------C----cceeecCCeeeeCCCCeEEEEEEee
Q 028355 76 RLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTA------P----KSCYMRPPGGVLAPGDSIIATVFKF 143 (210)
Q Consensus 76 ~L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKTTa------P----~~Y~VRP~~GiL~Pges~~I~Vtl~ 143 (210)
-|.|++. .+.|+.. +-...|+|+|.++.++.-.+.... | .-|.|-|+.-.|+||+...|.|...
T Consensus 29 ~v~i~~T-RvIy~~~---~k~~sl~l~N~~~~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 29 GLIAQGT-RVVFPAS---EREVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp --CCSCS-EEEEETT---CSEEEEEEEECSSSCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEEEEC
T ss_pred eEEEcce-EEEEeCC---CcEEEEEEEeCCCCeEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEEEEC
Confidence 4778885 8888743 223799999999988766654322 1 2399999999999999999999874
No 14
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=88.78 E-value=3.7 Score=34.19 Aligned_cols=63 Identities=11% Similarity=0.196 Sum_probs=48.7
Q ss_pred EEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEccCC-----CcceeecCCeeeeCCCCeEEEEEEee
Q 028355 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTA-----PKSCYMRPPGGVLAPGDSIIATVFKF 143 (210)
Q Consensus 77 L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKTTa-----P~~Y~VRP~~GiL~Pges~~I~Vtl~ 143 (210)
|.+++. .+.|+... + ...|+|+|.++.++.-.+..-. ..-|.|-|+.-.|+||+...|.|.+.
T Consensus 14 v~i~~T-RvIy~~~~-k--~~sl~l~N~~~~p~LvQsWv~~~~~~~~~pfivtPPl~rl~p~~~q~lRI~~~ 81 (221)
T 2co7_B 14 VKLGAT-RVIYHAGT-A--GATLSVSNPQNYPILVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVRT 81 (221)
T ss_dssp CEESCS-EEEEETTS-S--CEEEEEECCSSSCEEEEEEEEETTSSSBCSEEEESSEEEECTTCEEEEEEEEC
T ss_pred EEEcce-EEEEcCCC-C--EEEEEEEcCCCCcEEEEEEEecCCCCccCCEEEeCCEEEECCCCceEEEEEEC
Confidence 678885 88887543 2 3699999999887766654321 23499999999999999999999875
No 15
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=87.80 E-value=11 Score=31.26 Aligned_cols=63 Identities=16% Similarity=0.184 Sum_probs=48.5
Q ss_pred EEecCCCceEeeCCCCCeeEEEEEEECCCCC-cEEEEEccCC-------CcceeecCCeeeeCCCCeEEEEEEee
Q 028355 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKS-HVAFKFQTTA-------PKSCYMRPPGGVLAPGDSIIATVFKF 143 (210)
Q Consensus 77 L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~-~VAFKVKTTa-------P~~Y~VRP~~GiL~Pges~~I~Vtl~ 143 (210)
|.+++. .+.|+... -...|+|+|.++. ++.-.+.... ..-|.|-|+.-.|+||+...|.|.+.
T Consensus 2 v~l~~T-RvIy~~~~---k~~sl~l~N~~~~~p~LvQsWi~~~~~~~~~~~pfivtPPl~rl~p~~~q~lRI~~~ 72 (218)
T 2xg5_A 2 VSLDRT-RAVFDGSE---KSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTT 72 (218)
T ss_dssp EEESCS-EEEEETTS---SEEEEEEEECCSSSCEEEEEEEECTTSCEECSSSEEEECSEEEECTTCEEEEEEEEC
T ss_pred cEeCce-EEEEeCCC---CEEEEEEEcCCCCCcEEEEEEEecCCCCccccCCEEEcCCeEEECCCCceEEEEEec
Confidence 567785 88887532 3479999999988 7766654322 22499999999999999999999885
No 16
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=86.82 E-value=11 Score=30.94 Aligned_cols=62 Identities=10% Similarity=0.164 Sum_probs=47.7
Q ss_pred EEecCCCceEeeCCCCCeeEEEEEEECCCCC-cEEEEEccCC-----CcceeecCCeeeeCCCCeEEEEEEe
Q 028355 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKS-HVAFKFQTTA-----PKSCYMRPPGGVLAPGDSIIATVFK 142 (210)
Q Consensus 77 L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~-~VAFKVKTTa-----P~~Y~VRP~~GiL~Pges~~I~Vtl 142 (210)
|.+++. .+.|+.. +-...|+|+|.++. ++.-.+.... ..-|.|-|+.-.|+||+...|.|..
T Consensus 2 v~l~~T-RvIy~~~---~k~~sl~l~N~~~~~p~LvQsWi~~~~~~~~~pfivtPPl~rl~p~~~q~lRI~~ 69 (205)
T 1klf_A 2 VALGAT-RVIYPAG---QKQVQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILD 69 (205)
T ss_dssp EEESCS-EEEEETT---CSEEEEEEEECCSSCCEEEEEEEEETTSCCCSSEEEESSEEEECSSEEEEEEEEE
T ss_pred eEecce-EEEEeCC---CcEEEEEEEcCCCCCcEEEEEEEecCCCCccCCEEEcCCeEEECCCCceEEEEEe
Confidence 567785 7888753 23479999999987 7766654321 2349999999999999999999987
No 17
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=85.14 E-value=6 Score=33.42 Aligned_cols=64 Identities=13% Similarity=0.161 Sum_probs=48.0
Q ss_pred cEEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEccC-----CCcceeecCCeeeeCCCCeEEEEEEee
Q 028355 76 RLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTT-----APKSCYMRPPGGVLAPGDSIIATVFKF 143 (210)
Q Consensus 76 ~L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKTT-----aP~~Y~VRP~~GiL~Pges~~I~Vtl~ 143 (210)
-|.|++. .+.|+... -...|+|+|.++.++.-.+... ...-|.|-|+.-.|+||+...|.|...
T Consensus 23 ~v~l~~T-RvIy~~~~---k~~sl~l~N~~~~P~LvQsWv~~~~~~~~~pfivtPPlfRlep~~~q~lRIi~~ 91 (239)
T 4djm_A 23 SLHLGAT-RVVYNPAS---SGETLTVINDQDYPMLVQSEVLSEDQKSPAPFVVTPPLFRLDGQQSSRLRIVRT 91 (239)
T ss_dssp CCEESCS-EEEECTTS---SCEEEEEEECSSSCEEEEEEEECTTSSSBCSEEEESSEEEECTTEEEEEEEEEC
T ss_pred eEEEcce-EEEEeCCC---CEEEEEEEeCCCCcEEEEEEEEcCCCCccCCEEEcCCeEEECCCCceEEEEEEC
Confidence 3778885 88886532 2369999999988765544321 123499999999999999999999874
No 18
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=84.29 E-value=16 Score=29.92 Aligned_cols=63 Identities=10% Similarity=0.124 Sum_probs=47.2
Q ss_pred EEecCCCceEeeCCCCCeeEEEEEEECCCC-CcEEEEEccCC-----CcceeecCCeeeeCCCCeEEEEEE-ee
Q 028355 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSK-SHVAFKFQTTA-----PKSCYMRPPGGVLAPGDSIIATVF-KF 143 (210)
Q Consensus 77 L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~-~~VAFKVKTTa-----P~~Y~VRP~~GiL~Pges~~I~Vt-l~ 143 (210)
|.+++. .+.|+... -...|+|+|.++ .++.-.+.... ..-|.|-|+.-.|+||+...|.|. +.
T Consensus 2 v~l~~T-RvIy~~~~---k~~sl~l~N~~~~~p~LvQsWv~~~~~~~~~pfivtPPl~rl~p~~~q~lRI~~~~ 71 (206)
T 1l4i_A 2 VALGAT-RVIYPEGQ---KQVQLAVTNNDDKSSYLIQSWIENAEGKKDARFVITPPLFSMQGKKENTLRIIDAT 71 (206)
T ss_dssp EEESCS-EEEEETTC---SEEEEEEEECCTTCEEEEEEEEEETTSCBCSSEEEESSEEEEESSEEEEEEEEECC
T ss_pred eEeCce-EEEEeCCC---cEEEEEEEeCCCCccEEEEEEEecCCCCccCCEEEcCCeEEECCCCceEEEEEecC
Confidence 567775 78887532 347999999986 77666554321 234999999999999999999998 63
No 19
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=77.77 E-value=5.9 Score=36.34 Aligned_cols=65 Identities=22% Similarity=0.229 Sum_probs=49.9
Q ss_pred CcEEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEccCCCcceee---------------------cCCeeeeCCC
Q 028355 75 RRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYM---------------------RPPGGVLAPG 133 (210)
Q Consensus 75 ~~L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKTTaP~~Y~V---------------------RP~~GiL~Pg 133 (210)
..+.++-. .-.|.- +++..+-.|+++|.++++|-+.==+|+.-+|.= .|+ =|+||
T Consensus 282 ~~V~~~v~-~A~Y~v-pgR~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~s~~--pI~PG 357 (419)
T 3rfr_A 282 EQVTTELN-GGVYKV-PGRELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLSNDD--VIAPG 357 (419)
T ss_dssp CCCEEEEE-EEEEES-SSSEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCCCCC--CBCTT
T ss_pred CceEEEEe-ceEEec-CCcEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCCCCC--CcCCC
Confidence 34666663 566764 689999999999999999988866666666551 123 59999
Q ss_pred CeEEEEEEee
Q 028355 134 DSIIATVFKF 143 (210)
Q Consensus 134 es~~I~Vtl~ 143 (210)
|+.+|+|..+
T Consensus 358 ETrt~~V~a~ 367 (419)
T 3rfr_A 358 ESKEIVVKIQ 367 (419)
T ss_dssp CEEEEEEEEE
T ss_pred cceEEEEEee
Confidence 9999999997
No 20
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=74.93 E-value=11 Score=27.88 Aligned_cols=61 Identities=8% Similarity=0.139 Sum_probs=43.7
Q ss_pred ceEeeCCCCC-eeEEEEEEECCCCCcEEEEEccCCCcceee-cCCeeeeCCCCeEEEEEEeee
Q 028355 84 NLYFPYEPGK-QTRSAVRLKNTSKSHVAFKFQTTAPKSCYM-RPPGGVLAPGDSIIATVFKFV 144 (210)
Q Consensus 84 eL~F~~~~~k-~v~~~LtL~N~S~~~VAFKVKTTaP~~Y~V-RP~~GiL~Pges~~I~Vtl~~ 144 (210)
.|+-....|. +-...|+|.|.+.++..|.|+-.....+.+ .|..=.|+||+...+.|++..
T Consensus 21 ~Ly~~~~dG~I~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g~~~i~v~~g~~~~~~v~v~~ 83 (118)
T 2r39_A 21 QLFRVNSAGEVENTYTLKVINKTQQVQEYNLDVKGLNDVSWYGKQTIQVEPGEVLNLPMSLGA 83 (118)
T ss_dssp CCCCC--CCSEEEEEEEEEEECSSSCEEEEEEEESCSSCEEESCCEEEECTTCEEEEEEEEEE
T ss_pred ceEEEcCCCeEEEEEEEEEEECCCCCEEEEEEEeCCcccEEeCCCcEEECCCCEEEEEEEEEE
Confidence 4555444453 345899999999999999988766444554 455568899999998888853
No 21
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=71.42 E-value=12 Score=34.03 Aligned_cols=69 Identities=20% Similarity=0.283 Sum_probs=52.5
Q ss_pred CCCcEEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEccCCCcceee---------cC------------CeeeeC
Q 028355 73 PRRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYM---------RP------------PGGVLA 131 (210)
Q Consensus 73 ~~~~L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKTTaP~~Y~V---------RP------------~~GiL~ 131 (210)
....+.++-. .-.|.- +|+..+-.|+++|.++++|-..==+|+.-+|.- -| ...=|+
T Consensus 246 ~~~~V~~~v~-~A~Y~v-pgR~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~ 323 (382)
T 1yew_A 246 PAPTVSVKVE-DATYRV-PGRAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLA 323 (382)
T ss_dssp CCCSEEEEEE-EEEEES-SCSEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBC
T ss_pred CCCceEEEee-ccEEec-CCcEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcC
Confidence 4566777774 666664 699999999999999999988866777766643 22 112389
Q ss_pred CCCeEEEEEEee
Q 028355 132 PGDSIIATVFKF 143 (210)
Q Consensus 132 Pges~~I~Vtl~ 143 (210)
|||+.+|.|..+
T Consensus 324 PGETr~~~v~a~ 335 (382)
T 1yew_A 324 PGETRTVDVTAS 335 (382)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCceeEEEEEee
Confidence 999999999987
No 22
>3jt0_A Lamin-B1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, HR5546A, LMNB1_human; 2.39A {Homo sapiens}
Probab=70.69 E-value=7.2 Score=30.68 Aligned_cols=41 Identities=24% Similarity=0.339 Sum_probs=27.0
Q ss_pred EEEEECCCCCcEE---EEEccCCCc--ceeecCCeeeeCCCCeEEE
Q 028355 98 AVRLKNTSKSHVA---FKFQTTAPK--SCYMRPPGGVLAPGDSIIA 138 (210)
Q Consensus 98 ~LtL~N~S~~~VA---FKVKTTaP~--~Y~VRP~~GiL~Pges~~I 138 (210)
.|+|.|.+++.+. |+|+=...+ ..+.-|..=+|+||++++|
T Consensus 39 fV~L~N~s~~~~~LgGW~L~r~v~g~~~~y~FP~~~~L~pg~~VtV 84 (144)
T 3jt0_A 39 FIRLKNTSEQDQPMGGWEMIRKIGDTSVSYKYTSRYVLKAGQTVTI 84 (144)
T ss_dssp EEEEEECSSSCEECTTCEEEEEETTEEEEEECCTTCEECTTCEEEE
T ss_pred EEEEEECCCCceecCCcEEEEEeCCCceEEEcCCCcEECCCCEEEE
Confidence 7889999887663 666533222 1234466669999998765
No 23
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=66.73 E-value=53 Score=27.05 Aligned_cols=63 Identities=16% Similarity=0.197 Sum_probs=47.0
Q ss_pred EEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEccC-------CCcceeecCCeeeeCCCCeEEEEEEee
Q 028355 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTT-------APKSCYMRPPGGVLAPGDSIIATVFKF 143 (210)
Q Consensus 77 L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKTT-------aP~~Y~VRP~~GiL~Pges~~I~Vtl~ 143 (210)
|.|+-. .+.|+... + ...|+|+|.++.++.-..... ...-|.|-|+.-.|+||+...|.|...
T Consensus 14 v~l~~T-RvIy~~~~-k--~~sl~l~N~~~~p~LvQswv~~~~~~~~~~~pFivtPPl~Rl~p~~~q~lRI~~~ 83 (218)
T 4ay0_A 14 VTIGES-RIIYPLDA-A--GVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRIAQA 83 (218)
T ss_dssp EEESCC-EEEEETTC-S--CEEEEEECCSSSCEEEEEEEECTTSCCCSSCSEEEESSEEEECTTCEEEEEEEEC
T ss_pred EEECce-EEEECCCC-c--EEEEEEEcCCCCCEEEEEEEecCCCCccccCCEEECCCeEEeCCCCceEEEEEec
Confidence 667774 78886432 2 368999999988876554331 112399999999999999999999874
No 24
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=63.52 E-value=17 Score=27.69 Aligned_cols=51 Identities=18% Similarity=0.085 Sum_probs=38.8
Q ss_pred CCCeeEEEEEEECCCCCc-EEEEEccCCCcceeecCCeeeeCCCCeEEEEEEe
Q 028355 91 PGKQTRSAVRLKNTSKSH-VAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFK 142 (210)
Q Consensus 91 ~~k~v~~~LtL~N~S~~~-VAFKVKTTaP~~Y~VRP~~GiL~Pges~~I~Vtl 142 (210)
.|+.++-.++++|.+... =+|+|+-...+...-.-..+ |++|++..|.+..
T Consensus 31 ~G~~~ti~vtV~N~G~~~a~~~~V~lyvng~~v~t~~v~-La~G~s~tv~f~~ 82 (127)
T 3idu_A 31 VNKLAEYEVHVKNLGGIGVPSTKVRVYINGTLYKNWTVS-LGPKEEKVLTFNW 82 (127)
T ss_dssp TTCCEEEEEEEEECSSSCEEEEEEEEEETTEEEEEEEEE-ECTTCEEEEEEEE
T ss_pred CCCEEEEEEEEEECCCCccCCcEEEEEECCEEEeeEEec-cCCCCeEEEEEEE
Confidence 588899999999998864 47888755555544333334 9999999999887
No 25
>2g30_A AP-2 complex subunit beta-1; alpha-helical ARH peptide, platform domain, sandwich domain, endocytosis, adaptor, endocytosis/exocytosis complex; 1.60A {Homo sapiens} SCOP: b.1.10.1 d.105.1.1 PDB: 1e42_A 3h1z_A 3hs9_A 2iv9_A 2iv8_A
Probab=62.48 E-value=7.2 Score=33.33 Aligned_cols=64 Identities=19% Similarity=0.221 Sum_probs=41.9
Q ss_pred CCcEEecCCCceEeeCCCCCeeEEEEEEECCCCCcE-EEEEccCCCcceeecCCe-----eeeCCCCeEEEEEEee
Q 028355 74 RRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHV-AFKFQTTAPKSCYMRPPG-----GVLAPGDSIIATVFKF 143 (210)
Q Consensus 74 ~~~L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~V-AFKVKTTaP~~Y~VRP~~-----GiL~Pges~~I~Vtl~ 143 (210)
+.-|.|+=. |... +.++.-.|+|+|.+..++ -|.|+-+ .+.|-+-|.. .-|+||++.++.|-+.
T Consensus 41 g~GLeI~g~----f~r~-~g~i~l~l~~~N~s~~~is~faIQfN-kNsFGL~p~~~~~~~~~L~pgqs~~v~lpl~ 110 (258)
T 2g30_A 41 AKGLEISGT----FTHR-QGHIYMEMNFTNKALQHMTDFAIQFN-KNSFGVIPSTPLAIHTPLMPNQSIDVSLPLN 110 (258)
T ss_dssp TTTEEEEEE----EEEE-TTEEEEEEEEEECSSSCBCCCEEEEC-CBTTCCEESSCCCCCSCBCTTCEEEEEEEEE
T ss_pred CCcEEEEEE----EEEe-CCEEEEEEEEecCCccceeeeEEEEc-ccccCcccCccccCCCccCCCCcEEEEEeee
Confidence 345555542 5443 567778999999999754 4455443 3444444432 4499999999998885
No 26
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=60.02 E-value=74 Score=26.43 Aligned_cols=63 Identities=11% Similarity=0.104 Sum_probs=44.9
Q ss_pred EEecCCCceEeeCCCCCeeEEEEEEECCCCC-cEEEEEccC--C----CcceeecCCeeeeCCCCeEEEEEEee
Q 028355 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKS-HVAFKFQTT--A----PKSCYMRPPGGVLAPGDSIIATVFKF 143 (210)
Q Consensus 77 L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~-~VAFKVKTT--a----P~~Y~VRP~~GiL~Pges~~I~Vtl~ 143 (210)
|.++.. .+.|+... -...|+|+|.++. ++.-.+... . ..-|.|-|+.-.|+||+...|.|...
T Consensus 2 ~~l~~T-RvIy~~~~---k~~sl~l~N~~~~~p~LvQsWid~~~~~~~~~pfivtPPlfRlep~~~q~lRIi~~ 71 (224)
T 3gfu_C 2 LAVDQT-RYIFRGDK---DALTITVTNNDKERTFGGQAWVDNIVEKDTRPTFVVTPSFFKVKPNGQQTLRIIMA 71 (224)
T ss_dssp EECSCS-EEEEETTS---SCEEEEEEECCSSCCEEEEEEEEESSCCSCSCSEEEESSEEEECTTCEEEEEEEEC
T ss_pred ccccce-EEEEeCCC---ceEEEEEEeCCCCccEEEEEEEecCCCCcccCCEEEcCCeEEECCCCceEEEEEEC
Confidence 556774 77887532 2379999999876 544333211 1 12399999999999999999999874
No 27
>3zy7_A AP-1 complex subunit gamma-1; endocytosis, protein design, computational design; 1.09A {Mus musculus} PDB: 2a7b_A 1gyv_A 1gyw_A
Probab=50.55 E-value=75 Score=23.66 Aligned_cols=68 Identities=19% Similarity=0.312 Sum_probs=45.7
Q ss_pred eeEEEEEEECCCCCcE-EEEEccCCCcceeec--CCee-eeCC--CCeEEEEEEeeecCCCCcCCCCCCCCCCCeEEEEE
Q 028355 94 QTRSAVRLKNTSKSHV-AFKFQTTAPKSCYMR--PPGG-VLAP--GDSIIATVFKFVEAPENNERQPLDQKSKDKFKIMS 167 (210)
Q Consensus 94 ~v~~~LtL~N~S~~~V-AFKVKTTaP~~Y~VR--P~~G-iL~P--ges~~I~Vtl~~~~p~~~e~~p~~~~~kDKFlVqs 167 (210)
...-.++.+|.+..+| -|.++.-.|+.|.++ |..| .|.| +..++=.+.+. .+ ....-+=|+.|.+
T Consensus 30 ~~~i~~~~~N~s~~~it~f~fqaAVPKs~kL~L~p~Sg~~l~p~~~~~itQ~l~i~--n~-------~~~~lklR~klsY 100 (122)
T 3zy7_A 30 VTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVVPAFNTGTITQVIKVL--NP-------QKQQLRMRIKLTF 100 (122)
T ss_dssp EEEEEEEEEECSSSCBEEEEEEEECCTTSEEEECCCSCSCBCGGGSCCEEEEEEEE--CT-------TCCCCCEEEEEEE
T ss_pred eEEEEEEEEECCCCccccEEEEEEcCcccEEEecCCCCCccCCCCCCCEEEEEEEE--CC-------CCCCEEEEEEEEE
Confidence 4566788899988766 799999999998877 6665 7999 66655555443 22 1223556666666
Q ss_pred EEe
Q 028355 168 LKV 170 (210)
Q Consensus 168 ~~v 170 (210)
..-
T Consensus 101 ~~~ 103 (122)
T 3zy7_A 101 NWN 103 (122)
T ss_dssp EET
T ss_pred EEC
Confidence 543
No 28
>3hs8_A Adaptor protein complex AP-2, alpha 2 subunit; adaptor complex AP-2, endocytosis, cell membrane, coated PIT binding, membrane, disease mutation; 1.90A {Mus musculus}
Probab=44.46 E-value=49 Score=28.29 Aligned_cols=57 Identities=11% Similarity=0.039 Sum_probs=37.7
Q ss_pred CCeeEEEEEEECCCCCcEE-EEEccCCCc----ce--eecCCeeeeCCCCeEEEEEEeeecCCC
Q 028355 92 GKQTRSAVRLKNTSKSHVA-FKFQTTAPK----SC--YMRPPGGVLAPGDSIIATVFKFVEAPE 148 (210)
Q Consensus 92 ~k~v~~~LtL~N~S~~~VA-FKVKTTaP~----~Y--~VRP~~GiL~Pges~~I~Vtl~~~~p~ 148 (210)
+...+-.|.+.|.+..++. |++.-..++ .+ .+.|.-..|+|++.+...|......|+
T Consensus 67 ~~~g~i~L~~gNKs~~~it~f~~~i~~~~~~~~~l~~~~~~~~~tI~p~~q~qq~i~v~~~~pF 130 (273)
T 3hs8_A 67 QNLGRMFIFYGNKTSTQFLNFTPTLICADDLQTNLNLQTKPVDPTVDGGAQVQQVVNIECISDF 130 (273)
T ss_dssp TTEEEEEEEEEECSSSCBBSCCCEEECCTTHHHHEEEEECCCCSCBCTTCEEEEEEEEEECSCC
T ss_pred CceEEEEEEEEcCCCCcceeEEEEEECCCCCCcceEEEecCCCCeECCCCEEEEEEEEEEcccc
Confidence 4466789999999987663 666544443 34 345666899999987766654322354
No 29
>3mnm_A ADP-ribosylation factor-binding protein GGA2; IG-like, beta sandwich, protein transport; HET: MLY; 1.73A {Saccharomyces cerevisiae}
Probab=40.67 E-value=1.1e+02 Score=22.80 Aligned_cols=51 Identities=22% Similarity=0.221 Sum_probs=36.9
Q ss_pred CCeeEEEEEEECCCCCcE-EEEEccCCCcceeec--CCee-eeCCC--CeEEEEEEe
Q 028355 92 GKQTRSAVRLKNTSKSHV-AFKFQTTAPKSCYMR--PPGG-VLAPG--DSIIATVFK 142 (210)
Q Consensus 92 ~k~v~~~LtL~N~S~~~V-AFKVKTTaP~~Y~VR--P~~G-iL~Pg--es~~I~Vtl 142 (210)
.....-.++.+|.+..+| -|.++.-.|+.|.++ |..| .|.|+ ..++=.+.+
T Consensus 30 ~~~~~i~~~fsN~s~~~it~f~fqaAVPKs~kL~L~p~Sg~~L~p~~~~~itQ~~~I 86 (123)
T 3mnm_A 30 NSVIRIXSFFTNLSSSPISNLVFLLAVPKSMSLXLQPQSSNFMIGNAKDGISQEGTI 86 (123)
T ss_dssp SSCEEEEEEEEECSSSCEEEEEEEEECCTTSEEEECCCSCSCBCTTCTTCEEEEEEE
T ss_pred CCeEEEEEEEecCCCCccccEEEEEecCcccEEEeECCCcCccCCCCCCCEEEEEEE
Confidence 334556788889988766 799999999998877 6566 79998 444444444
No 30
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=36.83 E-value=39 Score=25.51 Aligned_cols=40 Identities=25% Similarity=0.311 Sum_probs=28.2
Q ss_pred EEEEECCCCCcEE---EEEccCCCc---ceeecCCeeeeCCCCeEEE
Q 028355 98 AVRLKNTSKSHVA---FKFQTTAPK---SCYMRPPGGVLAPGDSIIA 138 (210)
Q Consensus 98 ~LtL~N~S~~~VA---FKVKTTaP~---~Y~VRP~~GiL~Pges~~I 138 (210)
.|+|.|.+++.+. |+|+-...+ .|.. |..=+|+||++++|
T Consensus 26 fV~L~N~s~~~~~L~gW~l~r~v~~~~~~y~F-p~~~~L~pg~~vtV 71 (123)
T 3hn9_A 26 FIRLKNTSEQDQPMGGWEMIRKIGDTSVSYKY-TSRYVLKAGQTVTI 71 (123)
T ss_dssp EEEEEECSSSCEECTTCEEEEEETTEEEEEEC-CTTCEECTTCEEEE
T ss_pred EEEEEECCCCceecCCcEEEEEeCCCceEEEc-CCCcEECCCCEEEE
Confidence 7889999887664 777644332 3544 66669999998765
No 31
>3zy7_A AP-1 complex subunit gamma-1; endocytosis, protein design, computational design; 1.09A {Mus musculus} PDB: 2a7b_A 1gyv_A 1gyw_A
Probab=35.50 E-value=38 Score=25.34 Aligned_cols=55 Identities=13% Similarity=0.200 Sum_probs=37.1
Q ss_pred cccee-eeccCCCCCcEEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEccC
Q 028355 62 TVSYV-ARSLLPPRRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTT 116 (210)
Q Consensus 62 ~~~~~-a~~~~p~~~~L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKTT 116 (210)
+++.+ -.--+|..-.|++.|..-=..+.-.+..++..|+|.|....++.-|+|-+
T Consensus 44 ~it~f~fqaAVPKs~kL~L~p~Sg~~l~p~~~~~itQ~l~i~n~~~~~lklR~kls 99 (122)
T 3zy7_A 44 DMTDFVFQAAVPKTFQLQLLSPSSSVVPAFNTGTITQVIKVLNPQKQQLRMRIKLT 99 (122)
T ss_dssp CBEEEEEEEECCTTSEEEECCCSCSCBCGGGSCCEEEEEEEECTTCCCCCEEEEEE
T ss_pred ccccEEEEEEcCcccEEEecCCCCCccCCCCCCCEEEEEEEECCCCCCEEEEEEEE
Confidence 45544 24457777889999986444443236779999999999876665555543
No 32
>2huh_A Putative DNA mismatch repair protein; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.54A {Bacteroides thetaiotaomicron} SCOP: b.7.5.1
Probab=32.66 E-value=1.2e+02 Score=23.77 Aligned_cols=66 Identities=15% Similarity=0.228 Sum_probs=51.3
Q ss_pred EEEEEEECCCCCcEEEEEccCCCcceeecCCeeeeCCCCeEEEEEEeeecCCCCcCCCCCCCCCCCeEEEEEEEeCCC
Q 028355 96 RSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVKGG 173 (210)
Q Consensus 96 ~~~LtL~N~S~~~VAFKVKTTaP~~Y~VRP~~GiL~Pges~~I~Vtl~~~~p~~~e~~p~~~~~kDKFlVqs~~v~~~ 173 (210)
+-.+-|.|.|+..+.|-.-+-..+.+.+| ..|.|+|+..+.|.=.-. .+...-.+|.||-+....+
T Consensus 29 ~fe~YlVNdSNy~l~f~y~~~~~~~w~l~-~~G~iePntk~~ieef~~-----------~eln~~~~~~vQ~layK~~ 94 (147)
T 2huh_A 29 PFEAYLVNDSNYYLYYTYLSAEGKAWNNR-SHGLVEPNTKLLLEEFTK-----------DVLNEMERVAVQLIAFKDG 94 (147)
T ss_dssp CEEEEEEECSSSEEEEEEEEEETTEEEEE-EEEEECTTEEEEEEEECG-----------GGGGGCSSEEEEEEEECSS
T ss_pred ceEEEEEeCCCcEEEEEEEEeeCCeEEEE-EeeEECCCcEEEEEeeCh-----------hHhcCCceEEEEEEEEcCC
Confidence 35778999999999999988777888777 689999999998874432 1123457899999988774
No 33
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=32.32 E-value=1.3e+02 Score=26.31 Aligned_cols=65 Identities=12% Similarity=0.089 Sum_probs=49.5
Q ss_pred EEEEEECCCCCcEEEEEccCCCcceeecCCeeeeCCCCeEEEEEEeeecCCCCcCCCCCCCCCCCeEEEEEEEeCCC
Q 028355 97 SAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVKGG 173 (210)
Q Consensus 97 ~~LtL~N~S~~~VAFKVKTTaP~~Y~VRP~~GiL~Pges~~I~Vtl~~~~p~~~e~~p~~~~~kDKFlVqs~~v~~~ 173 (210)
-.|.|+|.++- -|.++-+.+..|.+.++.=-|+|+++..+.|-.. + ......-+|-|.-+.+.++
T Consensus 270 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~ 334 (343)
T 3e38_A 270 VTLSITNVTDL--VLKLKKTAHDTLLVYFRDMTLKPHTRYTVRIGFK-----Q-----GIKGGDVNFEVTNFIVAPD 334 (343)
T ss_dssp EEEEEEECSSS--CEEEEECSCCTTEECCSEEEECTTEEEEEEEEEC-----T-----TCCCCEEEEEEEEEEEETT
T ss_pred eEEEeecCCCc--ceeeeccccccccccCceEEecCCCeEEEEEecc-----c-----cccceEEEEEeeeeeecCC
Confidence 47888888876 5667778899999999999999999999998873 1 1123456787777766554
No 34
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=28.91 E-value=1.6e+02 Score=21.18 Aligned_cols=48 Identities=15% Similarity=0.214 Sum_probs=36.9
Q ss_pred CCeeEEEEEEECCCCC---cEEEEEccCCC---cceeecCCeeeeCCCCeEEEEEEee
Q 028355 92 GKQTRSAVRLKNTSKS---HVAFKFQTTAP---KSCYMRPPGGVLAPGDSIIATVFKF 143 (210)
Q Consensus 92 ~k~v~~~LtL~N~S~~---~VAFKVKTTaP---~~Y~VRP~~GiL~Pges~~I~Vtl~ 143 (210)
++.....+.++|+=.. ...|-|--..- ..+. .|-|.||+++.+++.+.
T Consensus 19 ~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~~----~~~v~pg~~~~~~~~~~ 72 (102)
T 2xzz_A 19 GQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRPKILN----VGDIGGNETVTLRQSFV 72 (102)
T ss_dssp SSCEEEEEEEECCSSSCBCSEEEEEEETTTEEEEEEE----ECCBCTTCEEEEEEEEC
T ss_pred CCeEEEEEEEECCCCCcccCEEEEEECCCCCcceEEE----cCcCCCCCEEEEEEEEe
Confidence 7888999999999775 56888764432 3333 37799999999999984
No 35
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=26.97 E-value=1.5e+02 Score=20.27 Aligned_cols=52 Identities=25% Similarity=0.311 Sum_probs=35.5
Q ss_pred EecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEccCCCcceeecCCeeeeCCCCeEEEEEEe
Q 028355 78 RLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFK 142 (210)
Q Consensus 78 ~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKTTaP~~Y~VRP~~GiL~Pges~~I~Vtl 142 (210)
..+|. +|+.+ .|+.+ .+.++|.....-.|-+.... ..+.|.||++..+.++.
T Consensus 24 ~F~P~-~i~v~--~G~tV--~~~~~n~d~~~H~~~~~~~~--------~~~~~~pg~~~~~~~t~ 75 (100)
T 4hci_A 24 YFNPN-VITIP--INEST--TLLLKNKGKSEHTFTIKKLG--------IDVVVESGKEKNITVKP 75 (100)
T ss_dssp EEESS-EEEEC--TTSCE--EEEEEECSSSCEEEEEGGGT--------EEEEECTTCEEEEEECC
T ss_pred EEeCC-EEEEC--CCCEE--EEEEEcCCCceEEEEEecCC--------cceeecCCcceeEEEec
Confidence 57784 77764 56655 67788987766667665332 13578999998888764
No 36
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=25.76 E-value=65 Score=24.22 Aligned_cols=41 Identities=27% Similarity=0.425 Sum_probs=27.4
Q ss_pred EEEEECCCCCcE---EEEEccCC---CcceeecCCeeeeCCCCeEEE
Q 028355 98 AVRLKNTSKSHV---AFKFQTTA---PKSCYMRPPGGVLAPGDSIIA 138 (210)
Q Consensus 98 ~LtL~N~S~~~V---AFKVKTTa---P~~Y~VRP~~GiL~Pges~~I 138 (210)
.|+|.|.+++.+ -|+|+-.. ...-+.-|..=+|+||++++|
T Consensus 20 fV~l~N~s~~~~~L~gW~l~r~v~~~~~~~y~Fp~~~~L~pg~~vtI 66 (121)
T 1ifr_A 20 FVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTI 66 (121)
T ss_dssp EEEEEECSSSCEECTTCEEEEEETTSCCEEEECCSSCEECTTCEEEE
T ss_pred EEEEEeCCCCccccCCCEEEEEcCCCccEEEEeCCCcEECCCCEEEE
Confidence 688999888766 36776442 223334577778999998653
No 37
>1gyu_A Adapter-related protein complex 1 gamma 1 subunit; clathrin, golgi, adaptin, endocytosis, adaptor; 1.81A {Mus musculus} SCOP: b.1.10.2
Probab=24.85 E-value=69 Score=24.59 Aligned_cols=48 Identities=13% Similarity=0.225 Sum_probs=30.5
Q ss_pred eccCCCCCcEEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEcc
Q 028355 68 RSLLPPRRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQT 115 (210)
Q Consensus 68 ~~~~p~~~~L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKT 115 (210)
.--+|..-.|.+.|..--..+.-.+..++..|+|.|....++.-|+|-
T Consensus 69 QaAVPKs~kLqL~ppSg~~L~p~~~~~ItQ~m~I~n~~~~~l~LR~kl 116 (140)
T 1gyu_A 69 QAAVPKTFQLQLLSPSSSVVPAFNTGTITQVIKVLNPQKQQLRMRIKL 116 (140)
T ss_dssp EEECCTTCEEEECCCSCSCBCGGGCCCEEEEEEEECTTCCCCCEEEEE
T ss_pred EEEcCcccEEEeeCCCCCccCCCCCCCEEEEEEEeCCCCCCEEEEEEE
Confidence 334677778888885443333212345789999999876666555554
No 38
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=24.47 E-value=1.3e+02 Score=22.15 Aligned_cols=51 Identities=12% Similarity=0.049 Sum_probs=37.6
Q ss_pred CCCeeEEEEEEECCCCCc--EEEEEccCCCcceeecCC-e----eeeCCCCeEEEEEE
Q 028355 91 PGKQTRSAVRLKNTSKSH--VAFKFQTTAPKSCYMRPP-G----GVLAPGDSIIATVF 141 (210)
Q Consensus 91 ~~k~v~~~LtL~N~S~~~--VAFKVKTTaP~~Y~VRP~-~----GiL~Pges~~I~Vt 141 (210)
.+...+..+.|+|.++.+ |.||+-==..+-+.|.|. . =+|.+++++.|.-.
T Consensus 36 ~~g~l~~~~~l~N~~~~~~~l~Yrf~WyD~~Gl~v~~~~~~W~~l~l~~~~~~~l~~v 93 (112)
T 3o0l_A 36 EAGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEGVSWKSLKLHGKQQMQVTAL 93 (112)
T ss_dssp GGGCEEEEEEEEECSSSCEEEEEEEEEECTTSCBCCCTTCCCEEEEECTTCEEEEEEE
T ss_pred cCCeEEEEEEEEeCCCCCEEEEEEEEEECCCCCCcCCCCCCcEEEEECCCCeEEEEEE
Confidence 456677999999999986 899987666777777765 1 24777887776644
No 39
>1wm3_A Ubiquitin-like protein SMT3B; ubiquitin fold, half-open barrel, two helices, protein transport; 1.20A {Homo sapiens} SCOP: d.15.1.1 PDB: 1wm2_A 3uin_B 3uio_B 2ckh_B
Probab=23.89 E-value=74 Score=21.05 Aligned_cols=21 Identities=24% Similarity=0.464 Sum_probs=17.6
Q ss_pred EEEEECCCCCcEEEEEccCCC
Q 028355 98 AVRLKNTSKSHVAFKFQTTAP 118 (210)
Q Consensus 98 ~LtL~N~S~~~VAFKVKTTaP 118 (210)
.|+++..+...|.|||+.+.+
T Consensus 3 ~lkV~~~~g~~v~~~v~~~t~ 23 (72)
T 1wm3_A 3 NLKVAGQDGSVVQFKIKRHTP 23 (72)
T ss_dssp EEEEECTTSCEEEEEECTTSC
T ss_pred EEEEECCCCCEEEEEECCCCh
Confidence 578888888899999997766
No 40
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=23.84 E-value=2.4e+02 Score=26.42 Aligned_cols=50 Identities=14% Similarity=0.097 Sum_probs=37.2
Q ss_pred eeEEEEEEECCCCCcEEEEEccCCCcce--eecCCeeee-CCCCeEEEEEEee
Q 028355 94 QTRSAVRLKNTSKSHVAFKFQTTAPKSC--YMRPPGGVL-APGDSIIATVFKF 143 (210)
Q Consensus 94 ~v~~~LtL~N~S~~~VAFKVKTTaP~~Y--~VRP~~GiL-~Pges~~I~Vtl~ 143 (210)
..+-.-+++|.....-.|+++.++|.-. .|.|..=.+ +.||+..++|++.
T Consensus 538 ~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~ 590 (621)
T 3vta_A 538 NQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVR 590 (621)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEE
T ss_pred EEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEE
Confidence 3444568999999999999998888754 456776555 5678888888774
No 41
>1gyu_A Adapter-related protein complex 1 gamma 1 subunit; clathrin, golgi, adaptin, endocytosis, adaptor; 1.81A {Mus musculus} SCOP: b.1.10.2
Probab=22.87 E-value=2.5e+02 Score=21.29 Aligned_cols=69 Identities=19% Similarity=0.340 Sum_probs=42.9
Q ss_pred CeeEEEEEEECCCCCcE-EEEEccCCCcceeec--CCee-eeCCCCe--EEEEEEeeecCCCCcCCCCCCCCCCCeEEEE
Q 028355 93 KQTRSAVRLKNTSKSHV-AFKFQTTAPKSCYMR--PPGG-VLAPGDS--IIATVFKFVEAPENNERQPLDQKSKDKFKIM 166 (210)
Q Consensus 93 k~v~~~LtL~N~S~~~V-AFKVKTTaP~~Y~VR--P~~G-iL~Pges--~~I~Vtl~~~~p~~~e~~p~~~~~kDKFlVq 166 (210)
+...-.++.+|.+..+| -|.++.-.|+.|.++ |..| .|.|+.. ++-.+.+. .+. ..+-+=|+.|.
T Consensus 47 ~~~~i~~~f~N~s~~~it~f~fQaAVPKs~kLqL~ppSg~~L~p~~~~~ItQ~m~I~--n~~-------~~~l~LR~kls 117 (140)
T 1gyu_A 47 SVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVVPAFNTGTITQVIKVL--NPQ-------KQQLRMRIKLT 117 (140)
T ss_dssp TEEEEEEEEEECSSSCBEEEEEEEECCTTCEEEECCCSCSCBCGGGCCCEEEEEEEE--CTT-------CCCCCEEEEEE
T ss_pred CEEEEEEEEEECCCCccccEEEEEEcCcccEEEeeCCCCCccCCCCCCCEEEEEEEe--CCC-------CCCEEEEEEEE
Confidence 34556778899887655 899999899998887 4445 6888443 33333332 221 12345566666
Q ss_pred EEEe
Q 028355 167 SLKV 170 (210)
Q Consensus 167 s~~v 170 (210)
+..-
T Consensus 118 Y~~~ 121 (140)
T 1gyu_A 118 YNHK 121 (140)
T ss_dssp EEET
T ss_pred EEEC
Confidence 6543
No 42
>2e9g_A AP-1 complex subunit gamma-2; beta-sandwich, immunoglobulin-like fold, adaptin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.86 E-value=67 Score=24.22 Aligned_cols=55 Identities=20% Similarity=0.314 Sum_probs=35.9
Q ss_pred cccee-eeccCCCCCcEEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEccC
Q 028355 62 TVSYV-ARSLLPPRRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTT 116 (210)
Q Consensus 62 ~~~~~-a~~~~p~~~~L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKTT 116 (210)
+++.+ -.--+|..-.|.+.|..--....-.+..++..|+|.|....++..|+|-+
T Consensus 53 ~it~f~fQaAVPK~~kLqL~p~Sg~~l~p~~~~~ItQ~~~i~n~~~~~l~lR~kls 108 (131)
T 2e9g_A 53 DVTHFICQAAVPKSLQLQLQAPSGNTVPARGGLPITQLFRILNPNKAPLRLKLRLT 108 (131)
T ss_dssp CEEEEEEEEECCTTSCCEECCCSCSEECTTTCCCBCCCEEEECTTCCCCCEEEEEE
T ss_pred ccccEEEEEEcCcccEEEeeCCCCCCcCCCCCCCEEEEEEEeCCCCCCEEEEEEEE
Confidence 34433 23447777889999965555543223457889999999776666666643
No 43
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=21.52 E-value=82 Score=24.37 Aligned_cols=41 Identities=22% Similarity=0.352 Sum_probs=27.8
Q ss_pred EEEEECCCCCcE---EEEEccCCCc---ceeecCCeeeeCCCCeEEE
Q 028355 98 AVRLKNTSKSHV---AFKFQTTAPK---SCYMRPPGGVLAPGDSIIA 138 (210)
Q Consensus 98 ~LtL~N~S~~~V---AFKVKTTaP~---~Y~VRP~~GiL~Pges~~I 138 (210)
.|+|.|.+++.+ -|+|+=...+ .-+.-|+.=+|+||++++|
T Consensus 35 fV~L~N~s~~~~~L~GW~L~r~v~g~~~~~y~Fp~~~~L~pg~~VtI 81 (139)
T 2lll_A 35 FVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQMVTV 81 (139)
T ss_dssp EEEEEECSSSCEECSSCEEEEEETTSCEEEEECCTTCEECTTCEEEE
T ss_pred EEEEEECCCCccccCCCEEEEecCCCccEEEEECCCcEECCCCEEEE
Confidence 788999988766 4677644321 2333577779999998653
No 44
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=21.44 E-value=69 Score=23.61 Aligned_cols=62 Identities=15% Similarity=0.150 Sum_probs=35.9
Q ss_pred cEEecCCCceEeeCCCCCeeEEEEEEEC--CCCCcEEEEEccCC----------------------CcceeecCCeeeeC
Q 028355 76 RLRLDPSNNLYFPYEPGKQTRSAVRLKN--TSKSHVAFKFQTTA----------------------PKSCYMRPPGGVLA 131 (210)
Q Consensus 76 ~L~i~P~~eL~F~~~~~k~v~~~LtL~N--~S~~~VAFKVKTTa----------------------P~~Y~VRP~~GiL~ 131 (210)
.+..+|. .|+++ .|+.+ .|+++| .+...--|-+.... .+..++......|.
T Consensus 27 ~~~F~P~-~i~v~--~G~tV--~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~ 101 (140)
T 1qhq_A 27 ALAFAQT-SLSLP--ANTVV--RLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLN 101 (140)
T ss_dssp SSSBSCS-EEEEE--TTCEE--EEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBC
T ss_pred CceEeCC-eEEEC--CCCEE--EEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeC
Confidence 3667784 77775 46644 788889 43332223332111 01112233346799
Q ss_pred CCCeEEEEEEe
Q 028355 132 PGDSIIATVFK 142 (210)
Q Consensus 132 Pges~~I~Vtl 142 (210)
||++..+++++
T Consensus 102 pG~~~~~~~~~ 112 (140)
T 1qhq_A 102 AGESGSVTFRT 112 (140)
T ss_dssp TTEEEEEEEEC
T ss_pred CCceeEEEEEe
Confidence 99999999887
No 45
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=21.12 E-value=82 Score=23.63 Aligned_cols=62 Identities=6% Similarity=0.131 Sum_probs=36.0
Q ss_pred cEEecCCCceEeeCCCC-CeeEEEEEEECCCCCc-----EEEEEccCC-------------C-cceee--cC----Ceee
Q 028355 76 RLRLDPSNNLYFPYEPG-KQTRSAVRLKNTSKSH-----VAFKFQTTA-------------P-KSCYM--RP----PGGV 129 (210)
Q Consensus 76 ~L~i~P~~eL~F~~~~~-k~v~~~LtL~N~S~~~-----VAFKVKTTa-------------P-~~Y~V--RP----~~Gi 129 (210)
-+..+|. +|..+ .| +++ .|+|+|..+-+ =-|-|-... + ..|.- .+ ...+
T Consensus 12 ~m~F~p~-~i~V~--~G~~~v--tv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~ 86 (129)
T 1cuo_A 12 TMTYSTR-SISVP--ASCAEF--TVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPI 86 (129)
T ss_dssp SSCCSCS-EEEEE--TTCSEE--EEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCC
T ss_pred CceEccC-eEEEc--CCCeEE--EEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeE
Confidence 4667774 66665 46 654 88999997532 223332221 0 01110 01 2357
Q ss_pred eCCCCeEEEEEEe
Q 028355 130 LAPGDSIIATVFK 142 (210)
Q Consensus 130 L~Pges~~I~Vtl 142 (210)
|.||++..|++..
T Consensus 87 l~pGet~svtf~~ 99 (129)
T 1cuo_A 87 IGGGEKTSVKFKV 99 (129)
T ss_dssp BCTTCEEEEEEEG
T ss_pred ECCCCEEEEEEec
Confidence 9999999999885
No 46
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae}
Probab=20.27 E-value=39 Score=30.75 Aligned_cols=47 Identities=9% Similarity=0.063 Sum_probs=33.8
Q ss_pred CCcEEecCCCceEeeCCCCCeeEEEEEEECCCCCcEEEEEccCCCcceeec
Q 028355 74 RRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMR 124 (210)
Q Consensus 74 ~~~L~i~P~~eL~F~~~~~k~v~~~LtL~N~S~~~VAFKVKTTaP~~Y~VR 124 (210)
.+.+.|.|..|++|..+++. .++|+..+..-+.|=+.=-..+.|.+-
T Consensus 38 ~~~~~l~~~~e~R~ev~~~~----~~~i~l~~g~~~i~G~~L~~~~~~t~g 84 (460)
T 2npi_A 38 WHKLVIPKGSDWQIDLKAEG----KLIVKVNSGIVEIFGTELAVDDEYTFQ 84 (460)
T ss_dssp CEEEECCTTEECCEECCTTC----EEEEEEEESCEEETTEECCBTSEEEEE
T ss_pred cEEEEeCCCcEEEEEECCCC----eEEEEEeeeEEEEEEEEecCCCeEEEc
Confidence 46799999999999988774 566666666666665555556667763
Done!