Query 028360
Match_columns 210
No_of_seqs 240 out of 1705
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 16:57:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028360.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028360hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1g0s_A Hypothetical 23.7 kDa p 99.8 2.9E-19 1E-23 149.2 13.7 97 105-207 16-122 (209)
2 2dsc_A ADP-sugar pyrophosphata 99.8 3.7E-19 1.3E-23 148.2 14.2 100 105-207 17-124 (212)
3 1vhz_A ADP compounds hydrolase 99.8 8.6E-19 3E-23 145.2 13.6 95 106-207 11-107 (198)
4 1mk1_A ADPR pyrophosphatase; n 99.8 1.9E-18 6.3E-23 143.5 12.5 96 106-207 7-103 (207)
5 3o6z_A GDP-mannose pyrophospha 99.8 2.9E-18 9.8E-23 140.9 12.2 96 106-207 5-110 (191)
6 2yvp_A NDX2, MUTT/nudix family 99.7 9.8E-18 3.4E-22 134.9 9.6 95 106-207 5-100 (182)
7 3q91_A Uridine diphosphate glu 99.7 1.2E-17 4E-22 141.9 5.9 80 124-206 16-127 (218)
8 1v8y_A ADP-ribose pyrophosphat 99.6 9.6E-16 3.3E-20 122.2 9.4 86 105-207 6-91 (170)
9 2w4e_A MUTT/nudix family prote 99.6 4.3E-16 1.5E-20 121.5 6.8 62 142-207 3-64 (145)
10 3cng_A Nudix hydrolase; struct 99.4 3.7E-13 1.3E-17 109.6 8.9 57 146-208 42-98 (189)
11 2b0v_A Nudix hydrolase; struct 99.4 4.1E-13 1.4E-17 103.7 7.2 48 156-207 18-65 (153)
12 3son_A Hypothetical nudix hydr 99.4 5.8E-13 2E-17 103.1 8.0 61 143-208 4-64 (149)
13 3shd_A Phosphatase NUDJ; nudix 99.4 6.9E-13 2.4E-17 102.8 7.5 48 156-208 15-62 (153)
14 1sjy_A MUTT/nudix family prote 99.4 8.8E-13 3E-17 102.4 7.1 58 146-207 15-75 (159)
15 1f3y_A Diadenosine 5',5'''-P1, 99.4 8.8E-13 3E-17 102.5 7.1 55 145-206 15-69 (165)
16 3gg6_A Nudix motif 18, nucleos 99.4 6.9E-13 2.4E-17 103.4 6.0 52 153-208 28-79 (156)
17 3grn_A MUTT related protein; s 99.4 1.1E-12 3.8E-17 102.1 7.1 59 146-208 10-69 (153)
18 4dyw_A MUTT/nudix family prote 99.4 1.3E-12 4.4E-17 102.9 7.6 57 146-208 31-87 (157)
19 3gwy_A Putative CTP pyrophosph 99.3 1.3E-12 4.3E-17 100.4 6.8 50 156-208 16-67 (140)
20 3h95_A Nucleoside diphosphate- 99.3 1.6E-12 5.4E-17 106.7 7.6 61 142-207 24-84 (199)
21 3i7u_A AP4A hydrolase; nudix p 99.3 1.4E-12 4.7E-17 101.3 6.7 53 146-208 6-58 (134)
22 2yyh_A MUTT domain, 8-OXO-DGTP 99.3 2.8E-12 9.6E-17 98.1 7.9 58 146-207 11-69 (139)
23 3f6a_A Hydrolase, nudix family 99.3 1.7E-12 5.8E-17 101.9 6.8 55 145-208 7-61 (159)
24 2o1c_A DATP pyrophosphohydrola 99.3 1.6E-12 5.5E-17 99.3 6.4 58 144-207 9-66 (150)
25 1ktg_A Diadenosine tetraphosph 99.3 3.1E-12 1.1E-16 97.1 7.8 56 146-205 5-60 (138)
26 3q93_A 7,8-dihydro-8-oxoguanin 99.3 2.3E-12 7.9E-17 104.0 7.1 57 147-207 26-82 (176)
27 3oga_A Nucleoside triphosphata 99.3 2.6E-12 8.7E-17 101.2 7.0 58 146-207 29-87 (165)
28 1u20_A U8 snoRNA-binding prote 99.3 1.2E-13 4.1E-18 115.5 -0.8 86 111-207 13-99 (212)
29 3ees_A Probable pyrophosphohyd 99.3 3.3E-12 1.1E-16 98.1 7.2 58 147-208 24-81 (153)
30 3r03_A Nudix hydrolase; struct 99.3 2.9E-12 1E-16 97.9 6.9 54 152-208 15-68 (144)
31 1vcd_A NDX1; nudix protein, di 99.3 2.6E-12 8.9E-17 96.1 6.3 53 146-207 4-56 (126)
32 1rya_A GDP-mannose mannosyl hy 99.3 3E-12 1E-16 99.5 6.9 56 146-206 20-75 (160)
33 3id9_A MUTT/nudix family prote 99.3 3.1E-12 1.1E-16 101.3 6.7 54 146-207 25-78 (171)
34 2fvv_A Diphosphoinositol polyp 99.3 2.3E-12 8E-17 106.4 6.0 55 147-207 43-98 (194)
35 3i9x_A MUTT/nudix family prote 99.3 2.6E-12 8.9E-17 104.1 6.1 48 159-207 46-99 (187)
36 2pbt_A AP4A hydrolase; nudix p 99.3 3.2E-12 1.1E-16 96.4 6.0 52 146-207 6-57 (134)
37 2rrk_A ORF135, CTP pyrophospho 99.3 4.7E-12 1.6E-16 96.1 6.9 49 156-207 19-67 (140)
38 3hhj_A Mutator MUTT protein; n 99.3 4.1E-12 1.4E-16 99.4 6.1 54 152-208 36-89 (158)
39 3eds_A MUTT/nudix family prote 99.3 2.3E-12 8E-17 100.9 4.4 53 146-207 23-75 (153)
40 3fcm_A Hydrolase, nudix family 99.3 6.4E-12 2.2E-16 102.7 7.1 53 146-205 47-99 (197)
41 3u53_A BIS(5'-nucleosyl)-tetra 99.3 1E-11 3.4E-16 97.4 7.8 47 157-207 22-68 (155)
42 2a6t_A SPAC19A8.12; alpha/beta 99.3 4E-12 1.4E-16 110.8 5.6 58 145-208 102-159 (271)
43 1mut_A MUTT, nucleoside tripho 99.2 1.7E-12 5.8E-17 97.0 2.6 49 156-207 15-63 (129)
44 1nqz_A COA pyrophosphatase (MU 99.2 8.8E-12 3E-16 101.1 6.3 60 146-207 36-96 (194)
45 2jvb_A Protein PSU1, mRNA-deca 99.2 3.3E-12 1.1E-16 98.3 3.5 55 146-207 6-60 (146)
46 3exq_A Nudix family hydrolase; 99.2 6.9E-12 2.4E-16 99.1 5.4 45 161-207 25-69 (161)
47 2azw_A MUTT/nudix family prote 99.2 4.5E-12 1.5E-16 97.0 4.1 56 144-207 18-73 (148)
48 1k2e_A Nudix homolog; nudix/MU 99.2 9.4E-12 3.2E-16 97.7 5.5 53 147-208 4-56 (156)
49 2kdv_A RNA pyrophosphohydrolas 99.2 1.4E-11 4.9E-16 98.2 6.4 55 145-207 9-63 (164)
50 2fb1_A Conserved hypothetical 99.2 2.2E-11 7.4E-16 102.9 7.5 60 146-207 15-74 (226)
51 1hzt_A Isopentenyl diphosphate 99.2 2.3E-11 7.9E-16 98.5 7.0 59 146-208 34-94 (190)
52 2b06_A MUTT/nudix family prote 99.2 3.3E-11 1.1E-15 93.5 7.2 32 176-208 38-69 (155)
53 1q27_A Putative nudix hydrolas 99.2 1.3E-11 4.5E-16 97.6 4.5 59 146-208 36-96 (171)
54 3fk9_A Mutator MUTT protein; s 99.2 3.4E-11 1.2E-15 98.4 6.8 53 147-207 6-58 (188)
55 2pqv_A MUTT/nudix family prote 99.2 3.1E-11 1.1E-15 93.7 6.2 51 146-207 21-71 (154)
56 2fkb_A Putative nudix hydrolas 99.2 3.9E-11 1.3E-15 95.6 6.8 55 146-206 39-97 (180)
57 3f13_A Putative nudix hydrolas 99.2 2.4E-11 8.2E-16 97.6 5.5 44 156-207 26-69 (163)
58 1vk6_A NADH pyrophosphatase; 1 99.2 3.1E-11 1.1E-15 105.4 6.1 47 156-207 150-196 (269)
59 3q1p_A Phosphohydrolase (MUTT/ 99.1 4.5E-11 1.5E-15 98.9 6.6 52 147-207 71-122 (205)
60 3gz5_A MUTT/nudix family prote 99.1 5.8E-11 2E-15 101.2 7.1 60 146-207 24-85 (240)
61 2fml_A MUTT/nudix family prote 99.1 9.2E-11 3.1E-15 101.8 8.0 48 158-207 55-102 (273)
62 3o8s_A Nudix hydrolase, ADP-ri 99.1 6.1E-11 2.1E-15 98.2 6.3 44 156-207 80-123 (206)
63 2qjt_B Nicotinamide-nucleotide 99.1 7.3E-11 2.5E-15 103.7 6.6 56 146-207 210-265 (352)
64 2qjo_A Bifunctional NMN adenyl 99.1 7.9E-11 2.7E-15 102.7 6.8 56 146-207 205-260 (341)
65 1x51_A A/G-specific adenine DN 99.0 2E-10 7E-15 89.5 4.3 45 161-206 36-82 (155)
66 2xsq_A U8 snoRNA-decapping enz 99.0 2E-10 6.9E-15 97.0 3.8 33 174-207 75-108 (217)
67 3fjy_A Probable MUTT1 protein; 99.0 8.4E-10 2.9E-14 98.6 7.3 46 158-208 37-82 (364)
68 3e57_A Uncharacterized protein 98.8 1.9E-09 6.5E-14 91.6 3.2 54 150-207 73-136 (211)
69 1q33_A Pyrophosphatase, ADP-ri 98.8 8.8E-09 3E-13 90.5 6.7 43 159-206 139-181 (292)
70 3qsj_A Nudix hydrolase; struct 98.7 1E-08 3.5E-13 87.9 4.3 61 146-207 10-92 (232)
71 3fsp_A A/G-specific adenine gl 98.6 2.1E-08 7E-13 90.5 5.3 55 150-208 245-299 (369)
72 2dho_A Isopentenyl-diphosphate 98.5 1E-07 3.5E-12 81.2 4.9 57 146-207 61-129 (235)
73 3bho_A Cleavage and polyadenyl 98.4 4.1E-07 1.4E-11 77.4 7.6 51 147-204 62-112 (208)
74 2pny_A Isopentenyl-diphosphate 98.4 2.2E-07 7.4E-12 79.9 4.4 57 146-207 72-140 (246)
75 3dup_A MUTT/nudix family prote 98.3 7.1E-07 2.4E-11 79.3 6.7 59 146-207 120-182 (300)
76 3kvh_A Protein syndesmos; NUDT 98.1 9.8E-07 3.3E-11 75.0 2.7 36 165-204 48-84 (214)
77 3rh7_A Hypothetical oxidoreduc 97.9 1E-05 3.5E-10 72.3 5.6 41 156-208 193-234 (321)
78 3fxt_A Nucleoside diphosphate- 97.5 2.8E-05 9.5E-10 60.4 1.1 76 55-134 30-112 (113)
79 1vig_A Vigilin; RNA-binding pr 25.1 36 0.0012 22.9 2.0 17 193-209 25-41 (71)
No 1
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.81 E-value=2.9e-19 Score=149.19 Aligned_cols=97 Identities=25% Similarity=0.286 Sum_probs=82.7
Q ss_pred EEEEeeEEEEeeeCCEEEEEEEEEE--cCCC---cEEeEEEEEeCCEEEEEEEEcCCCceEEEEEEEeecCCC-----Ce
Q 028360 105 QVLIQGVDMFGKRIGFLKFKADIFC--KETG---QKVPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTG-----RV 174 (210)
Q Consensus 105 ~~~i~s~~~f~~r~gfl~l~~d~v~--l~~G---~~~~~~v~~r~~aV~VLvi~~~~g~~~vlLvrQ~R~p~~-----~~ 174 (210)
...+++..+|. + |+++..+.+. ++|| ....+.++.++++|+|++++..+++ +||++|+|.+.+ .+
T Consensus 16 ~~~~~~~~v~~--g-~~~v~~~~~~~~~~~g~~~~~~~r~~~~~~~av~vl~~~~~~~~--vLLvrq~R~~~~~~~~~~~ 90 (209)
T 1g0s_A 16 VEIIARETLYR--G-FFSLDLYRFRHRLFNGQMSHEVRREIFERGHAAVLLPFDPVRDE--VVLIEQIRIAAYDTSETPW 90 (209)
T ss_dssp EEEEEEEEEEE--S-SSEEEEEEEEEBCTTSCBCCCEEEEEEECCCEEEEEEEETTTTE--EEEEEEECGGGGGGSSCSE
T ss_pred cEEEEEEEEEe--e-eEEEEEEEEEEEcCCCCcceEEEEEEEeCCCEEEEEEEECCCCE--EEEEEeecccCCCCCCCCe
Confidence 45677888898 5 9999999876 6887 4667778888999999998743565 999999999875 57
Q ss_pred EEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 175 ILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 175 ~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
.||||||++|+| |++++||+||++||||+++.
T Consensus 91 ~welPgG~ve~g-E~~~~aA~REl~EEtGl~~~ 122 (209)
T 1g0s_A 91 LLEMVAGMIEEG-ESVEDVARREAIEEAGLIVK 122 (209)
T ss_dssp EEECEEEECCTT-CCHHHHHHHHHHHHHCCCCC
T ss_pred EEEeCcccCCCC-cCHHHHHHHHHHHHcCcccC
Confidence 899999999998 99999999999999999764
No 2
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.81 E-value=3.7e-19 Score=148.23 Aligned_cols=100 Identities=24% Similarity=0.255 Sum_probs=84.1
Q ss_pred EEEEeeEEEEeeeCCEEEEEEEEEEcCCCcEEeEEEEEe-------CCEEEEEEEEcCCC-ceEEEEEEEeecCCCCeEE
Q 028360 105 QVLIQGVDMFGKRIGFLKFKADIFCKETGQKVPGIVFAR-------GPAVAVLILLDSEG-ETYAILTEQVRVPTGRVIL 176 (210)
Q Consensus 105 ~~~i~s~~~f~~r~gfl~l~~d~v~l~~G~~~~~~v~~r-------~~aV~VLvi~~~~g-~~~vlLvrQ~R~p~~~~~w 176 (210)
+..+++..+|. ++|+++..+.+.+++|....+.+..| +++|+|++++.+++ +..+||++|+|.+.+.+.|
T Consensus 17 ~~~~~~~~~~~--~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~av~v~~v~~~~~~~~~vlLv~q~R~~~~~~~w 94 (212)
T 2dsc_A 17 QYIISEELISE--GKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCI 94 (212)
T ss_dssp CEEEEEEEEEE--CSSEEEEEEEEECTTSCEEEEEEEEETTCCTTSCSEEEEEEEEECTTSCCEEEEEEEEEGGGTEEEE
T ss_pred ceEeeEEEEee--CCEEEEEEEEEECCCCCEEEEEEEEeeccCCCCCCEEEEEEEEeCCCCCcEEEEEEeecCCCCCcEE
Confidence 35667788898 89999999999999998876665554 68999988875321 2359999999998877789
Q ss_pred EeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 177 ELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 177 ElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+||||.+|+| |++++||+|||+||||+++.
T Consensus 95 elPgG~ve~g-Es~~~aA~REl~EEtGl~~~ 124 (212)
T 2dsc_A 95 EFPAGLIDDG-ETPEAAALRELEEETGYKGD 124 (212)
T ss_dssp ECCEEECCTT-CCHHHHHHHHHHHHHCCCCE
T ss_pred ECCccccCCC-CCHHHHHHHHHHHHhCCCcc
Confidence 9999999998 99999999999999999754
No 3
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.79 E-value=8.6e-19 Score=145.23 Aligned_cols=95 Identities=15% Similarity=0.105 Sum_probs=82.3
Q ss_pred EEEeeEEEEeeeCCEEEEEEEEEEcCCCcEEeEEEEE--eCCEEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceee
Q 028360 106 VLIQGVDMFGKRIGFLKFKADIFCKETGQKVPGIVFA--RGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGML 183 (210)
Q Consensus 106 ~~i~s~~~f~~r~gfl~l~~d~v~l~~G~~~~~~v~~--r~~aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~v 183 (210)
..+++..+|. ++|+++..+.+.+++|......+.. ++++|+|+++++ ++ +||++|+|.+.+.+.|+||||.+
T Consensus 11 ~~~~~~~~~~--~~~~~v~~~~~~~~~G~~~~~~~~~~~~~~av~vl~~~~--~~--vLLvrq~r~~~~~~~welPgG~v 84 (198)
T 1vhz_A 11 TILNVETVAR--SRLFTVESVDLEFSNGVRRVYERMRPTNREAVMIVPIVD--DH--LILIREYAVGTESYELGFSKGLI 84 (198)
T ss_dssp EEEEEEEEEE--CSSCEEEEEEEECTTSCEEEEEEECCCCCCEEEEEEEET--TE--EEEEEEEETTTTEEEEECEEEEC
T ss_pred EEeeEEEEEE--CCEEEEEEEEEEcCCCCEEEEEEEEeCCCCEEEEEEEEC--CE--EEEEEcccCCCCCcEEEeCcccC
Confidence 5677888998 9999999999999999887555554 577888887765 34 99999999988778999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCcee
Q 028360 184 DDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 184 d~g~Es~~~aA~REl~EETGi~v~ 207 (210)
|+| |++++||+||++||||+++.
T Consensus 85 e~g-Es~~~aA~REl~EEtGl~~~ 107 (198)
T 1vhz_A 85 DPG-ESVYEAANRELKEEVGFGAN 107 (198)
T ss_dssp CTT-CCHHHHHHHHHHHHHSEEEE
T ss_pred CCC-cCHHHHHHHHHHHHHCCCcC
Confidence 998 99999999999999999864
No 4
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.78 E-value=1.9e-18 Score=143.50 Aligned_cols=96 Identities=27% Similarity=0.234 Sum_probs=80.2
Q ss_pred EEEeeEEEEeeeCCEEEEEEEEEEcCCCcEEeEEEEEeCCEEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeC-
Q 028360 106 VLIQGVDMFGKRIGFLKFKADIFCKETGQKVPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLD- 184 (210)
Q Consensus 106 ~~i~s~~~f~~r~gfl~l~~d~v~l~~G~~~~~~v~~r~~aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd- 184 (210)
..+++..+|. +.|+++..+.+.+++|....+.++.++++|+|++++. +|+ +||++|+|.+.+.+.|+||||.+|
T Consensus 7 ~~~~~~~~~~--~~~~~~~~~~~~~p~G~~~~~~~~~~~~av~v~i~~~-~~~--vLLvrr~r~~~~~~~w~lPgG~ve~ 81 (207)
T 1mk1_A 7 ETISSETLHT--GAIFALRRDQVRMPGGGIVTREVVEHFGAVAIVAMDD-NGN--IPMVYQYRHTYGRRLWELPAGLLDV 81 (207)
T ss_dssp CEEEEEEEEE--CSSEEEEEEEEC-----CEEEEEEEECCEEEEEECCT-TSE--EEEEEEEETTTTEEEEECCEEECCS
T ss_pred EEEeEEEEEe--CCEEEEEEEEEECCCCCEEEEEEEeCCCEEEEEEEcC-CCE--EEEEEeecCCCCCcEEEeCCccccC
Confidence 4567888998 8999999999999999888777788889998887754 565 999999999987789999999999
Q ss_pred CCCCCHHHHHHHHHHHHhCCcee
Q 028360 185 DDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 185 ~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+| |++.+||+||++||||+++.
T Consensus 82 ~g-Es~~~aa~REl~EEtGl~~~ 103 (207)
T 1mk1_A 82 AG-EPPHLTAARELREEVGLQAS 103 (207)
T ss_dssp TT-CCHHHHHHHHHHHHHCEEEE
T ss_pred CC-CCHHHHHHHHHHHHHCCccc
Confidence 98 99999999999999999865
No 5
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.77 E-value=2.9e-18 Score=140.95 Aligned_cols=96 Identities=17% Similarity=0.212 Sum_probs=77.8
Q ss_pred EEEeeEEEEeeeCCEEEEEEEEEEc--CCCcE--EeEEEEEeCCEEEEEEEEcCCCceEEEEEEEeecCC------CCeE
Q 028360 106 VLIQGVDMFGKRIGFLKFKADIFCK--ETGQK--VPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPT------GRVI 175 (210)
Q Consensus 106 ~~i~s~~~f~~r~gfl~l~~d~v~l--~~G~~--~~~~v~~r~~aV~VLvi~~~~g~~~vlLvrQ~R~p~------~~~~ 175 (210)
..+.+...+. .+|+++..+.+.. +||.. ..+.++.++++|+|++++..+++ ++|++|+|.+. +.+.
T Consensus 5 ~~i~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~r~~~~~~~av~v~~~~~~~~~--vlLv~~~r~~~~~~~~~~~~~ 80 (191)
T 3o6z_A 5 ITLIKDKILS--DNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNTKKKT--VVLIRQFRVATWVNGNESGQL 80 (191)
T ss_dssp EEEEEEEEEE--CSSSEEEEEEEEEECTTSCEEEEEEEEEECCCEEEEEEEETTTTE--EEEEEEECHHHHTTTCTTCEE
T ss_pred eEEeEeEEEe--cCcEEEEEEEEEEECCCCCEEEEEEEEEecCCEEEEEEEECCCCE--EEEEEcCCccccccCCCCCeE
Confidence 3444455555 5899999998854 89975 46777888999999988764455 99999999876 6789
Q ss_pred EEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 176 LELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 176 wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
|+||||.+| | |++.+||+||++||||+++.
T Consensus 81 w~lPgG~ve-g-E~~~~aa~REl~EEtG~~~~ 110 (191)
T 3o6z_A 81 IESCAGLLD-N-DEPEVCIRKEAIEETGYEVG 110 (191)
T ss_dssp EECEEEECC-S-SCHHHHHHHHHHHHC-CCCS
T ss_pred EEecceEeC-C-CCHHHHHHHHHHHHhCCccC
Confidence 999999999 8 99999999999999999863
No 6
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.73 E-value=9.8e-18 Score=134.93 Aligned_cols=95 Identities=24% Similarity=0.248 Sum_probs=80.2
Q ss_pred EEEeeEEEEeeeCCEEEEEEEEEEcCCCcE-EeEEEEEeCCEEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeC
Q 028360 106 VLIQGVDMFGKRIGFLKFKADIFCKETGQK-VPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLD 184 (210)
Q Consensus 106 ~~i~s~~~f~~r~gfl~l~~d~v~l~~G~~-~~~~v~~r~~aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd 184 (210)
..+++..+|. +. +++..+.+.+++|.. ..+.+..++.+|++++++. +|+ ++|++|++.+.+.+.|+||||.+|
T Consensus 5 ~~~~~~~~~~--~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~i~~~-~~~--vLL~~r~~~~~~~~~w~~PgG~ve 78 (182)
T 2yvp_A 5 ERILLEEILS--EP-VRLVKERVRTHTGRELTYVYRPGPVAASFVLPVTE-RGT--ALLVRQYRHPTGKFLLEVPAGKVD 78 (182)
T ss_dssp EEEEEEEEEC--SS-SCEEEEEEECTTSCEEEEEEBCSSCEEEEEEEBCT-TSE--EEEEEEEEGGGTEEEEECCEEECC
T ss_pred eEeeeEEEEe--Cc-EEEEEEEEECCCCCEeeEEEEEecCCEEEEEEEcC-CCE--EEEEEeccCCCCCcEEEeccccCC
Confidence 4567888998 77 999999999999988 5666676677777776654 565 999999988766678999999999
Q ss_pred CCCCCHHHHHHHHHHHHhCCcee
Q 028360 185 DDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 185 ~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+| |++.+||+||++||||+++.
T Consensus 79 ~g-Es~~~aa~REl~EEtGl~~~ 100 (182)
T 2yvp_A 79 EG-ETPEAAARRELREEVGAEAE 100 (182)
T ss_dssp TT-CCHHHHHHHHHHHHHCEECS
T ss_pred CC-cCHHHHHHHHHHHHhCCCcc
Confidence 98 99999999999999999764
No 7
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.69 E-value=1.2e-17 Score=141.93 Aligned_cols=80 Identities=21% Similarity=0.173 Sum_probs=54.8
Q ss_pred EEEEEEcCCCcEEeEEEEEeCCEEEEEEEEcCCCceEEEEEEEeecCCC-------------------------------
Q 028360 124 KADIFCKETGQKVPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTG------------------------------- 172 (210)
Q Consensus 124 ~~d~v~l~~G~~~~~~v~~r~~aV~VLvi~~~~g~~~vlLvrQ~R~p~~------------------------------- 172 (210)
....+..+||....+.++.++++|+|++++..+++ +||++|+|.+..
T Consensus 16 ~~~~~~~~~G~~~~~e~v~~~~aV~vl~~~~~~~~--vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (218)
T 3q91_A 16 ENLYFQSMNGAQKSWDFMKTHDSVTVLLFNSSRRS--LVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSA 93 (218)
T ss_dssp -------------------CCCEEEEEEEEGGGTE--EEEEEEECHHHHHHHTC-------------------------C
T ss_pred eEEEEECCCCCEEEEEEEEcCCeEEEEEEECCCCE--EEEEEccccccccccccccccccccccccccccccccccccCC
Confidence 33344568999888888888999999998754455 999999998754
Q ss_pred CeEEEeeceeeCC-CCCCHHHHHHHHHHHHhCCce
Q 028360 173 RVILELPAGMLDD-DKGDFVGTAVREVSFILLLDF 206 (210)
Q Consensus 173 ~~~wElPaG~vd~-g~Es~~~aA~REl~EETGi~v 206 (210)
++.||||||.+|+ | |++++||+||++||||+++
T Consensus 94 ~~~welPgG~ve~~g-Es~~eaA~REl~EEtGl~~ 127 (218)
T 3q91_A 94 GVTVELCAGLVDQPG-LSLEEVACKEAWEECGYHL 127 (218)
T ss_dssp CEEEECEEEECCSSS-CCHHHHHHHHHHHHHCBCC
T ss_pred CeEEECCcceeCCCC-CCHHHHHHHHHHHHhCCcc
Confidence 6799999999999 8 9999999999999999987
No 8
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.63 E-value=9.6e-16 Score=122.23 Aligned_cols=86 Identities=26% Similarity=0.290 Sum_probs=67.7
Q ss_pred EEEEeeEEEEeeeCCEEEEEEEEEEcCCCcEEeEEEEEeCCEEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeC
Q 028360 105 QVLIQGVDMFGKRIGFLKFKADIFCKETGQKVPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLD 184 (210)
Q Consensus 105 ~~~i~s~~~f~~r~gfl~l~~d~v~l~~G~~~~~~v~~r~~aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd 184 (210)
...+++..+|. ++|+++..+ ..+.+..++++|+++++. +|+ ++|++|+|.+.+...|++|||.+|
T Consensus 6 ~~~~~~~~~~~--~~~~~v~~~---------~~~~~~~~~~~v~vii~~--~~~--vLL~~~~r~~~~~~~w~lPgG~ve 70 (170)
T 1v8y_A 6 YGGVERTYLYR--GRILNLALE---------GRYEIVEHKPAVAVIALR--EGR--MLFVRQMRPAVGLAPLEIPAGLIE 70 (170)
T ss_dssp -----CEEEEE--CSSEEEEEE---------TTEEEEEECCEEEEEEEE--TTE--EEEEECCBTTTTBCCBBCSEEECC
T ss_pred eEEEeEEEEEE--CCeEEEEEE---------eeEEEEecCCeEEEEEEE--CCE--EEEEEEEeCCCCCCEEECCccccC
Confidence 35667889998 899999986 233444567888888775 566 899999998866668999999999
Q ss_pred CCCCCHHHHHHHHHHHHhCCcee
Q 028360 185 DDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 185 ~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+| |++.+||+||++||||+ +.
T Consensus 71 ~g-Es~~~aa~REl~EEtGl-~~ 91 (170)
T 1v8y_A 71 PG-EDPLEAARRELAEQTGL-SG 91 (170)
T ss_dssp TT-CCHHHHHHHHHHHHHSE-EE
T ss_pred CC-CCHHHHHHHHHHHHHCC-Cc
Confidence 98 99999999999999998 54
No 9
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.62 E-value=4.3e-16 Score=121.50 Aligned_cols=62 Identities=29% Similarity=0.272 Sum_probs=53.6
Q ss_pred EeCCEEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 142 ARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 142 ~r~~aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
.++++|+|++++. +|+ ++|++|+|.+.+.+.|+||||.+|+| |++.+||+||++||||+++.
T Consensus 3 ~~~~~v~vi~~~~-~~~--vLLv~~~r~~~~~~~w~~PgG~ve~g-Et~~~aa~REl~EEtGl~~~ 64 (145)
T 2w4e_A 3 RGPRAVFILPVTA-QGE--AVLIRQFRYPLRATITEIVAGGVEKG-EDLGAAAARELLEEVGGAAS 64 (145)
T ss_dssp CCCEEEEEEEEET-TSE--EEEEEEEETTTTEEEEECEEEECCTT-CCHHHHHHHHHHHHHCEECS
T ss_pred eeCCEEEEEEEcC-CCE--EEEEEEEecCCCCCEEEeCCccCCCC-CCHHHHHHHHHHHhhCCccC
Confidence 3567888888765 565 89999999887667899999999998 99999999999999999764
No 10
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.43 E-value=3.7e-13 Score=109.61 Aligned_cols=57 Identities=23% Similarity=0.251 Sum_probs=45.3
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
+|+++++ + +|+ +||+++.+.+. ...|+||||.+|+| |++.+||+||++||||+++..
T Consensus 42 ~v~~ii~-~-~~~--vLL~~r~~~~~-~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~ 98 (189)
T 3cng_A 42 IVGCIPE-W-ENK--VLLCKRAIAPY-RGKWTLPAGFMENN-ETLVQGAARETLEEANARVEI 98 (189)
T ss_dssp EEEEEEE-E-TTE--EEEEEESSSSS-TTCEECSEEECCTT-CCHHHHHHHHHHHHHCCCEEE
T ss_pred EEEEEEE-e-CCE--EEEEEccCCCC-CCeEECceeeccCC-CCHHHHHHHHHHHHHCCcccc
Confidence 3444443 3 565 89998887654 34699999999998 999999999999999998753
No 11
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.40 E-value=4.1e-13 Score=103.69 Aligned_cols=48 Identities=27% Similarity=0.348 Sum_probs=42.2
Q ss_pred CCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 156 EGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 156 ~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+++ +||+++.+.+. ...|++|||.+|+| |++.+||+||++||||+++.
T Consensus 18 ~~~--vLl~~r~~~~~-~~~w~lPgG~ve~g-E~~~~aa~RE~~EEtGl~~~ 65 (153)
T 2b0v_A 18 DDK--YLLVEEIPRGT-AIKLNQPAGHLEPG-ESIIQACSREVLEETGHSFL 65 (153)
T ss_dssp TTE--EEEEEECSSSS-CCEEECSEEECCTT-SCHHHHHHHHHHHHHSEEEE
T ss_pred CCE--EEEEEEcCCCC-CCeEECCCcCcCCC-CCHHHHHHHHHHHhhCcEec
Confidence 565 89998877665 56899999999998 99999999999999999865
No 12
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.40 E-value=5.8e-13 Score=103.09 Aligned_cols=61 Identities=21% Similarity=0.143 Sum_probs=46.3
Q ss_pred eCCEEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 143 RGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 143 r~~aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
++.+|.|+++...+++..+||+++.+. ..|++|||.+|+| |++.+||+||++||||+++..
T Consensus 4 ~~~~v~vvi~~~~~~~~~vLl~~r~~~----g~w~~PgG~ve~g-E~~~~aa~REl~EEtGl~~~~ 64 (149)
T 3son_A 4 QPFQVLVIPFIKTEANYQFGVLHRTDA----DVWQFVAGGGEDE-EAISETAKRESIEELNLDVDV 64 (149)
T ss_dssp CCCEEEEEEEEECSSSEEEEEEEESSS----SCEECEEEECCTT-CCHHHHHHHHHHHHHTCCSCC
T ss_pred CceEEEEEEEEecCCCeEEEEEEEcCC----CCEeCCccccCCC-CCHHHHHHHHHHHHhCCCccc
Confidence 456776666543233334788776543 4699999999998 999999999999999998654
No 13
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.38 E-value=6.9e-13 Score=102.84 Aligned_cols=48 Identities=27% Similarity=0.368 Sum_probs=40.5
Q ss_pred CCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 156 EGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 156 ~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
+|+ +||+++.+ .+...|++|||.+|+| |++.+||+||++||||+++..
T Consensus 15 ~~~--vLl~~r~~--~~~~~w~~PgG~ve~g-Es~~~aa~REl~EEtGl~~~~ 62 (153)
T 3shd_A 15 EGK--FLVVEETI--NGKALWNQPAGHLEAD-ETLVEAAARELWEETGISAQP 62 (153)
T ss_dssp TTE--EEEEEEEE--TTEEEEECSEEECCTT-CCHHHHHHHHHHHHHCCCCCC
T ss_pred CCE--EEEEEecC--CCCCCEECCeEEeCCC-CCHHHHHHHHHHHHHCccccc
Confidence 566 88888763 3345799999999998 999999999999999998653
No 14
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.37 E-value=8.8e-13 Score=102.40 Aligned_cols=58 Identities=24% Similarity=0.353 Sum_probs=45.1
Q ss_pred EEEEEEEEcCCCceEEEEEEEee---cCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILLDSEGETYAILTEQVR---VPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R---~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
++++++++. +++ ++|+++.+ .+.....|+||||.+|.| |++.+||+||++||||+++.
T Consensus 15 ~~~~vi~~~-~~~--vLl~~r~~~~~~~~~~~~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~ 75 (159)
T 1sjy_A 15 AAGVVLLNE-RGD--ILLVQEKGIPGHPEKAGLWHIPSGAVEDG-ENPQDAAVREACEETGLRVR 75 (159)
T ss_dssp EEEEEEBCT-TCC--EEEEEESCC----CCCCCEECSEEECCTT-SCHHHHHHHHHHHHHSCCEE
T ss_pred eEEEEEEeC-CCC--EEEEEecccCcCCCCCCeEECCccccCCC-CCHHHHHHHHHHHHHCccce
Confidence 444454433 566 88888877 344445799999999998 99999999999999999864
No 15
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.37 E-value=8.8e-13 Score=102.53 Aligned_cols=55 Identities=16% Similarity=0.289 Sum_probs=45.0
Q ss_pred CEEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCce
Q 028360 145 PAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDF 206 (210)
Q Consensus 145 ~aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v 206 (210)
.+|++++++. +|+ +||+++.+.+ ..|++|||.+|+| |++.+||+||++||||+++
T Consensus 15 ~~v~~~i~~~-~~~--vLl~~r~~~~---g~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~ 69 (165)
T 1f3y_A 15 RNVGICLMNN-DKK--IFAASRLDIP---DAWQMPQGGIDEG-EDPRNAAIRELREETGVTS 69 (165)
T ss_dssp CEEEEEEECT-TSC--EEEEEETTEE---EEEECCEEECCTT-CCHHHHHHHHHHHHHCCCS
T ss_pred eeEEEEEECC-CCc--EEEEecCCCC---CcEECCeeccCCC-CCHHHHHHHHHHHhhCCCh
Confidence 4666666644 566 8888765433 5799999999998 9999999999999999985
No 16
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.36 E-value=6.9e-13 Score=103.37 Aligned_cols=52 Identities=25% Similarity=0.238 Sum_probs=43.0
Q ss_pred EcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 153 LDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 153 ~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
.+.+++ +||+++.+.+ ....|+||||.+|.| |++.+||+||++||||+++..
T Consensus 28 ~~~~~~--vLl~~r~~~~-~~~~w~~PgG~ve~g-E~~~~aa~REl~EEtGl~~~~ 79 (156)
T 3gg6_A 28 LSEQDE--VLLIQEAKRE-CRGSWYLPAGRMEPG-ETIVEALQREVKEEAGLHCEP 79 (156)
T ss_dssp BCTTSE--EEEEECCCTT-STTCEECSEEECCTT-CCHHHHHHHHHHHHHCEEEEE
T ss_pred EeCCCE--EEEEEecCCC-CCCEEECCeeeccCC-CCHHHHHHHHHHHhhCceeEe
Confidence 343555 8999887665 345799999999998 999999999999999998753
No 17
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.36 E-value=1.1e-12 Score=102.11 Aligned_cols=59 Identities=24% Similarity=0.261 Sum_probs=45.5
Q ss_pred EEEEEEEEcCCCceEEEEEEEeec-CCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 146 AVAVLILLDSEGETYAILTEQVRV-PTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~-p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
+|+++++ +.+|+ +||+++.+. +.....|+||||.+|+| |++.+||+||++||||+++..
T Consensus 10 ~v~~vi~-~~~~~--vLL~~r~~~~~~~~g~w~~PgG~ve~g-E~~~~aa~REl~EE~Gl~~~~ 69 (153)
T 3grn_A 10 SVYALIR-NEKGE--FLLLRRSENSRTNAGKWDLPGGKVNPD-ESLKEGVAREVWEETGITMVP 69 (153)
T ss_dssp EEEEEEE-CTTCC--EEEEEECTTCSSSTTCEECSEEECCTT-CCHHHHHHHHHHHHHCCCCCC
T ss_pred EEEEEEE-cCCCc--EEEEEEcCCCCCCCCeEECceeecCCC-CCHHHHHHhhhhhhhCcEeec
Confidence 3444444 33566 888877654 33445799999999998 999999999999999998653
No 18
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.36 E-value=1.3e-12 Score=102.92 Aligned_cols=57 Identities=21% Similarity=0.246 Sum_probs=46.0
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
+|+++++ + +++ +||+++.+.+ ....|+||||.+|+| |++.+||+||++||||+++..
T Consensus 31 ~v~~vi~-~-~~~--vLL~~r~~~~-~~~~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~ 87 (157)
T 4dyw_A 31 GCGAAIV-R-DGR--ILLIKRKRAP-EAGCWGLPGGKVDWL-EPVERAVCREIEEELGIALER 87 (157)
T ss_dssp EEEEEEE-E-TTE--EEEEEECSSS-STTCEECCEEECCTT-CCHHHHHHHHHHHHHSCEEES
T ss_pred EEEEEEE-E-CCE--EEEEEecCCC-CCCEEECCcccCCCC-CCHHHHHHHHHHHHHCccccc
Confidence 3444444 3 565 8999888766 455799999999998 999999999999999998753
No 19
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.35 E-value=1.3e-12 Score=100.35 Aligned_cols=50 Identities=10% Similarity=0.112 Sum_probs=38.5
Q ss_pred CCceEEEEEEEeecCC--CCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 156 EGETYAILTEQVRVPT--GRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 156 ~g~~~vlLvrQ~R~p~--~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
+|+ +||+++.+.+. ..+.|+||||.+|+| |++.+||.||++||||+++..
T Consensus 16 ~~~--vLL~~r~~~~~~~~~g~w~lPgG~ve~g-E~~~~aa~REl~EE~Gl~~~~ 67 (140)
T 3gwy_A 16 GEK--YLCVQRGQTKFSYTSFRYEFPGGKVEEG-ESLQEALQREIMEEMDYVIEV 67 (140)
T ss_dssp TTE--EEEEEC---------CCEECSEEECCTT-CCHHHHHHHHHHHHHCCCEEE
T ss_pred CCE--EEEEEecCCCCCCCCCeEECCCccCCCC-CCHHHHHHHHHHHhhCcEEEe
Confidence 566 88888877764 455799999999998 999999999999999998653
No 20
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.34 E-value=1.6e-12 Score=106.70 Aligned_cols=61 Identities=21% Similarity=0.220 Sum_probs=46.3
Q ss_pred EeCCEEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 142 ARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 142 ~r~~aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
.+..+|+++++.+.+++ +||++ .+.+. ...|+||||.+|+| |++.+||+||++||||+++.
T Consensus 24 ~~~v~v~~~v~~~~~~~--vLL~~-r~~~~-~g~w~lPGG~ve~g-Es~~~aA~REl~EEtGl~~~ 84 (199)
T 3h95_A 24 SHQVGVAGAVFDESTRK--ILVVQ-DRNKL-KNMWKFPGGLSEPE-EDIGDTAVREVFEETGIKSE 84 (199)
T ss_dssp --CCEEEEEEEETTTTE--EEEEE-ESSSS-TTSBBCCEEECCTT-CCHHHHHHHHHHHHHCCCEE
T ss_pred cccceEEEEEEeCCCCE--EEEEE-EcCCC-CCCEECCccccCCC-CCHHHHHHHHHHHHhCCccc
Confidence 34677877777664454 55554 45543 34699999999998 99999999999999999865
No 21
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.34 E-value=1.4e-12 Score=101.31 Aligned_cols=53 Identities=21% Similarity=0.238 Sum_probs=41.4
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
+++++++ + +|+ +||+++. ...|+||||.+|+| |++.+||+||++||||+++..
T Consensus 6 aag~vv~-~-~~~--vLL~~r~-----~g~W~~PgG~ve~g-Et~~~aa~RE~~EEtGl~~~~ 58 (134)
T 3i7u_A 6 SAGGVLF-K-DGE--VLLIKTP-----SNVWSFPKGNIEPG-EKPEETAVREVWEETGVKGEI 58 (134)
T ss_dssp EEEEEEE-E-TTE--EEEEECT-----TSCEECCEEECCTT-CCHHHHHHHHHHHHHSEEEEE
T ss_pred EEEEEEE-E-CCE--EEEEEeC-----CCcEECCeeEecCC-CCHHHHHHHHHHHhcCceEEE
Confidence 4555544 3 466 7887642 13599999999998 999999999999999998753
No 22
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.33 E-value=2.8e-12 Score=98.11 Aligned_cols=58 Identities=31% Similarity=0.361 Sum_probs=43.6
Q ss_pred EEEEEEEE-cCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILL-DSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~-~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+|+++++. +.+|+..+||+++.+.+.+ |++|||.+|+| |++.+||+||++||||+++.
T Consensus 11 ~v~~vi~~~~~~~~~~vLl~~r~~~~~~---w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~ 69 (139)
T 2yyh_A 11 ATDVIIRLWDGENFKGIVLIERKYPPVG---LALPGGFVEVG-ERVEEAAAREMREETGLEVR 69 (139)
T ss_dssp EEEEEEEEEETTEEEEEEEEEECSSSCS---EECCEEECCTT-CCHHHHHHHHHHHHHCCCCE
T ss_pred EEEEEEEEEcCCCcEEEEEEEecCCCCc---EECccccCCCC-CCHHHHHHHHHHHHHCCCcc
Confidence 45555554 2233322788887765432 99999999998 99999999999999999865
No 23
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.33 E-value=1.7e-12 Score=101.88 Aligned_cols=55 Identities=16% Similarity=0.119 Sum_probs=43.2
Q ss_pred CEEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 145 PAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 145 ~aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
.+|+++++. +++ +||+++.+ ...|++|||.+|+| |++.+||+||++||||+++..
T Consensus 7 ~~v~~vi~~--~~~--vLL~~r~~----~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~ 61 (159)
T 3f6a_A 7 FTVSVFIVC--KDK--VLLHLHKK----AKKMLPLGGHIEVN-ELPEEACIREAKEEAGLNVTL 61 (159)
T ss_dssp EEEEEEEEE--TTE--EEEEECSS----SCCEECEEEECCTT-CCHHHHHHHHHHHHHCCCCEE
T ss_pred EEEEEEEEE--CCE--EEEEEcCC----CCeEECCccCccCC-CCHHHHHHHHHHHHhCCCcee
Confidence 345555443 465 88888754 23699999999998 999999999999999998753
No 24
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.33 E-value=1.6e-12 Score=99.33 Aligned_cols=58 Identities=14% Similarity=0.185 Sum_probs=44.6
Q ss_pred CCEEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 144 GPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 144 ~~aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+.+|++++++.++|+ +||+++... ...|++|||.+|+| |++.+||+||++||||+++.
T Consensus 9 ~~~v~~~i~~~~~~~--vLl~~r~~~---~g~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~ 66 (150)
T 2o1c_A 9 PVSILVVIYAQDTKR--VLMLQRRDD---PDFWQSVTGSVEEG-ETAPQAAMREVKEEVTIDVV 66 (150)
T ss_dssp SEEEEEEEEETTTCE--EEEEECSSS---TTCEESEEEECCTT-CCHHHHHHHHHHHHHCCCHH
T ss_pred ceEEEEEEEeCCCCE--EEEEEecCC---CCceECCccccCCC-CCHHHHHHHHHHHHhCCCcc
Confidence 346666666553355 777765443 23699999999998 99999999999999999864
No 25
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.33 E-value=3.1e-12 Score=97.10 Aligned_cols=56 Identities=20% Similarity=0.153 Sum_probs=42.3
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCc
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLD 205 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~ 205 (210)
+|+++++.+++++.++||+++. . +...|++|||.+|+| |++.+||+||++||||++
T Consensus 5 ~~~~vi~~~~~~~~~vLl~~r~-~--~~~~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~ 60 (138)
T 1ktg_A 5 AAGLVIYRKLAGKIEFLLLQAS-Y--PPHHWTPPKGHVDPG-EDEWQAAIRETKEEANIT 60 (138)
T ss_dssp EEEEEEEEEETTEEEEEEEEES-S--TTCCEESSEEECCTT-CCHHHHHHHHHHHHHCCC
T ss_pred EEEEEEEEecCCCcEEEEEEcc-C--CCCcEeCCccccCCC-CCHHHHHHHHHHHHHCCC
Confidence 5666666553333347776653 2 234799999999998 999999999999999994
No 26
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.32 E-value=2.3e-12 Score=103.97 Aligned_cols=57 Identities=18% Similarity=0.045 Sum_probs=43.8
Q ss_pred EEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 147 VAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 147 V~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
++++++...+++ +||+++.+.+ ....|+||||.+|+| |++.+||+||++||||+++.
T Consensus 26 ~~~~~vi~~~~~--vLL~~r~~~~-~~g~W~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~ 82 (176)
T 3q93_A 26 LYTLVLVLQPQR--VLLGMKKRGF-GAGRWNGFGGKVQEG-ETIEDGARRELQEESGLTVD 82 (176)
T ss_dssp EEEEEEEECSSE--EEEEEECSST-TTTSEECEEEECCTT-SCHHHHHHHHHHHHHSCEES
T ss_pred EEEEEEEEeCCE--EEEEEEcCCC-CCCeEECceecCCCC-CCHHHHHHHHHHHHHCCcce
Confidence 333333343565 8888775543 445799999999998 99999999999999999874
No 27
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.31 E-value=2.6e-12 Score=101.20 Aligned_cols=58 Identities=12% Similarity=0.098 Sum_probs=41.2
Q ss_pred EEEEEEEEcCCCceEEEEEEEe-ecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILLDSEGETYAILTEQV-RVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~-R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+++++++.+ +|+ +||+++. +.+.....|++|||.+|+| |++.+||+||++||||+++.
T Consensus 29 ~~~~~ii~~-~~~--vLL~~r~~~~~~~~g~w~lPgG~ve~g-E~~~~aa~REl~EEtGl~~~ 87 (165)
T 3oga_A 29 TIVCPLIQN-DGC--YLLCKMADNRGVFPGQWALSGGGVEPG-ERIEEALRREIREELGEQLI 87 (165)
T ss_dssp EEEEEEEEE-TTE--EEEEEECC------CCEECCCEECCTT-CCHHHHHHHHHHHHHCSSCC
T ss_pred EEEEEEEeC-CCE--EEEEEecCCCCCCCCeEECCccccCCC-CCHHHHHHHHHHHHhCCCcc
Confidence 344444444 565 7777654 2223345799999999998 99999999999999999864
No 28
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.31 E-value=1.2e-13 Score=115.49 Aligned_cols=86 Identities=10% Similarity=0.007 Sum_probs=60.2
Q ss_pred EEEEeeeCCEEEEEEEEEEcCCCcEEeEEEEEeCCEEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCC-C
Q 028360 111 VDMFGKRIGFLKFKADIFCKETGQKVPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKG-D 189 (210)
Q Consensus 111 ~~~f~~r~gfl~l~~d~v~l~~G~~~~~~v~~r~~aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~E-s 189 (210)
.|+|. +.++.+ .+.+.+++|....+.+..++.++.++++.+.+++ ++|+++ . .+.|+||||.+|+| | +
T Consensus 13 ~~~~~--~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~vv~~i~~~~~~--vLl~~r--~---~g~w~~PGG~ve~g-E~t 81 (212)
T 1u20_A 13 EDKPR--PRNISR-EESLQLEGYKHACHALLHAPSQAKLFDRVPIRRV--LLMMMR--F---DGRLGFPGGFVDTR-DIS 81 (212)
T ss_dssp -CCCC--SEECCH-HHHHSCSSCEEEEEEEEEEECCCEETTTEECCEE--EEEEEE--T---TSCEECSEEEECTT-TSC
T ss_pred ccccc--cccCCH-HHHhhcCCCcccceEEEeCCCceEEEEEEecCCE--EEEEEe--C---CCeEECCCcccCCC-CCC
Confidence 55666 777777 4666678887765555544544444434442443 666554 2 34699999999998 9 9
Q ss_pred HHHHHHHHHHHHhCCcee
Q 028360 190 FVGTAVREVSFILLLDFL 207 (210)
Q Consensus 190 ~~~aA~REl~EETGi~v~ 207 (210)
+++||.||++||||+++.
T Consensus 82 ~~~aa~REl~EEtGl~~~ 99 (212)
T 1u20_A 82 LEEGLKRELEEELGPALA 99 (212)
T ss_dssp HHHHHHHHHHHHHCGGGG
T ss_pred HHHHHHHHHHHHHCCCcc
Confidence 999999999999999864
No 29
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.31 E-value=3.3e-12 Score=98.09 Aligned_cols=58 Identities=16% Similarity=0.175 Sum_probs=45.7
Q ss_pred EEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 147 VAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 147 V~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
++++++.. +|+ +||+++.+.+...+.|+||||.+|+| |++.+||.||++||||+++..
T Consensus 24 ~~~~i~~~-~~~--vLl~~r~~~~~~~g~w~~PgG~ve~g-E~~~~aa~RE~~EE~Gl~~~~ 81 (153)
T 3ees_A 24 VVAGFLRK-DGK--ILVGQRPENNSLAGQWEFPGGKIENG-ETPEEALARELNEELGIEAEV 81 (153)
T ss_dssp EEEEEEEE-TTE--EEEEECCTTSTTTTCEECSEEECCTT-CCHHHHHHHHHHHHHSCEEEC
T ss_pred EEEEEEEE-CCE--EEEEEeCCCCCCCCeEECCceeeCCC-CCHHHHHHHHHHHHHCCcccc
Confidence 33344444 565 88888766555456899999999998 999999999999999998753
No 30
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.31 E-value=2.9e-12 Score=97.90 Aligned_cols=54 Identities=24% Similarity=0.297 Sum_probs=43.3
Q ss_pred EEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 152 LLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 152 i~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
+.+.+|+ +||+++.+.+...+.|+||||.+|.| |++.+||.||++||||+++..
T Consensus 15 i~~~~~~--vLl~~r~~~~~~~g~w~lPgG~ve~g-E~~~~aa~RE~~EE~Gl~~~~ 68 (144)
T 3r03_A 15 LIDPDGR--VLLAQRPPGKSLAGLWEFPGGKLEPG-ETPEAALVRELAEELGVDTRA 68 (144)
T ss_dssp EBCTTSC--EEEEECCTTSSSTTCEECSEEECCTT-CCHHHHHHHHHHHHHCCBCCG
T ss_pred EEcCCCE--EEEEEeCCCCCCCCcEECCCcEecCC-CCHHHHHHHHHHHHhCceeec
Confidence 3343566 88887765544455799999999998 999999999999999998654
No 31
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.31 E-value=2.6e-12 Score=96.12 Aligned_cols=53 Identities=17% Similarity=0.101 Sum_probs=42.6
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+|+++++.. +++ ++|+++.+ ..|++|||.+|+| |++.+||.||++||||+++.
T Consensus 4 ~~~~vi~~~-~~~--vLl~~r~~-----g~w~~PgG~ve~g-E~~~~aa~RE~~EE~Gl~~~ 56 (126)
T 1vcd_A 4 GAGGVVFNA-KRE--VLLLRDRM-----GFWVFPKGHPEPG-ESLEEAAVREVWEETGVRAE 56 (126)
T ss_dssp EEEEEEECT-TSC--EEEEECTT-----SCEECCEECCCTT-CCHHHHHHHHHHHHHCCEEE
T ss_pred EEEEEEEcC-CCE--EEEEEECC-----CCccCCcCcCCCC-CCHHHHHHHHHHHhhCcEee
Confidence 455565544 566 78877643 2599999999998 99999999999999999875
No 32
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.31 E-value=3e-12 Score=99.45 Aligned_cols=56 Identities=20% Similarity=0.245 Sum_probs=44.5
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCce
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDF 206 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v 206 (210)
+|+++++. .+++ +||+++.+.+. ...|+||||.+|+| |++.+||+||++||||+++
T Consensus 20 ~v~~vi~~-~~~~--vLl~~r~~~~~-~g~w~~PgG~ve~g-E~~~~aa~REl~EEtGl~~ 75 (160)
T 1rya_A 20 SLDFIVEN-SRGE--FLLGKRTNRPA-QGYWFVPGGRVQKD-ETLEAAFERLTMAELGLRL 75 (160)
T ss_dssp EEEEEEEC-TTSC--EEEEEECSSSS-TTSEECCEEECCTT-CCHHHHHHHHHHHHHSSCC
T ss_pred EEEEEEEc-CCCE--EEEEeccCCCC-CCEEECCccccCCC-CCHHHHHHHHHHHHHCCCC
Confidence 45555553 3566 88888776543 44799999999998 9999999999999999985
No 33
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.30 E-value=3.1e-12 Score=101.28 Aligned_cols=54 Identities=17% Similarity=0.267 Sum_probs=43.2
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+|+++++ + +|+ +||++|.+. ...|+||||.+|+| |++.+||+||++||||+++.
T Consensus 25 ~v~~ii~-~-~~~--vLL~~r~~~---~~~w~~PgG~ve~g-Es~~~aa~REl~EEtGl~~~ 78 (171)
T 3id9_A 25 RVTGILI-E-DEK--VLLVKQKVA---NRDWSLPGGRVENG-ETLEEAMIREMREETGLEVK 78 (171)
T ss_dssp EEEEEEE-E-TTE--EEEEECSST---TCCEECCEEECCTT-CCHHHHHHHHHHHHHCCCEE
T ss_pred EEEEEEE-E-CCE--EEEEEEECC---CCeEECCCccCCCC-CCHHHHHHHHHHHHHCCccc
Confidence 3444444 3 465 888888763 34699999999998 99999999999999999875
No 34
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.29 E-value=2.3e-12 Score=106.42 Aligned_cols=55 Identities=27% Similarity=0.247 Sum_probs=43.3
Q ss_pred EEEEEEE-cCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 147 VAVLILL-DSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 147 V~VLvi~-~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
++++++. +.+++ +||++|.+.+ ..|+||||.+|+| |++++||+||++||||+++.
T Consensus 43 ~~~vi~~~~~~~~--vLLv~r~~~~---g~W~lPgG~ve~g-Et~~eaa~REl~EEtGl~~~ 98 (194)
T 2fvv_A 43 AACLCFRSESEEE--VLLVSSSRHP---DRWIVPGGGMEPE-EEPSVAAVREVCEEAGVKGT 98 (194)
T ss_dssp EEEEEESSTTCCE--EEEEECSSCT---TSEECSEEECCTT-CCHHHHHHHHHHHHHCEEEE
T ss_pred EEEEEEEECCCCE--EEEEEEeCCC---CcEECCCCcCCCC-cCHHHHHHHHHHHHhCCccc
Confidence 4444442 32344 8999887754 2599999999998 99999999999999999865
No 35
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.29 E-value=2.6e-12 Score=104.07 Aligned_cols=48 Identities=17% Similarity=0.139 Sum_probs=39.8
Q ss_pred eEEEEEEEeec------CCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 159 TYAILTEQVRV------PTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 159 ~~vlLvrQ~R~------p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
..+||+++.+. +.....|++|||.+|+| |++.+||+||++||||+++.
T Consensus 46 ~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~g-Es~~~aa~REl~EEtGl~~~ 99 (187)
T 3i9x_A 46 LHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDEN-ESAEQAAERELEEETSLTDI 99 (187)
T ss_dssp EEEEEEECCSBCTTSSBCTTTTCEECSEEECCTT-SCHHHHHHHHHHHHHCCCSC
T ss_pred CEEEEEEEccccccccCCCCCCEEECCceeCCCC-CCHHHHHHHHHHHHHCCCCc
Confidence 34899888642 33445799999999998 99999999999999999764
No 36
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.29 E-value=3.2e-12 Score=96.36 Aligned_cols=52 Identities=21% Similarity=0.208 Sum_probs=42.0
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+|+++++. +|+ +||+++.+ ..|++|||.+|+| |++.+||.||++||||+++.
T Consensus 6 ~~~~vi~~--~~~--vLl~~r~~-----~~w~~PgG~ve~g-E~~~~aa~RE~~EE~Gl~~~ 57 (134)
T 2pbt_A 6 SAGGVLFK--DGE--VLLIKTPS-----NVWSFPKGNIEPG-EKPEETAVREVWEETGVKGE 57 (134)
T ss_dssp EEEEEEEE--TTE--EEEEECTT-----SCEECCEEECCTT-CCHHHHHHHHHHHHHSEEEE
T ss_pred EEEEEEEE--CCE--EEEEEeCC-----CcEECCccccCCC-CCHHHHHHHHHHHHHCCccE
Confidence 45555554 455 88887654 4699999999998 99999999999999999865
No 37
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.29 E-value=4.7e-12 Score=96.12 Aligned_cols=49 Identities=18% Similarity=0.245 Sum_probs=41.9
Q ss_pred CCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 156 EGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 156 ~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+|+ ++|+++.+.+.....|+||||.+|.| |++.+||.||++||||+++.
T Consensus 19 ~~~--vLl~~r~~~~~~~g~w~lPgG~ve~g-E~~~~aa~RE~~EE~Gl~~~ 67 (140)
T 2rrk_A 19 DGK--ILLAQRPAQSDQAGLWEFAGGKVEPD-ESQRQALVRELREELGIEAT 67 (140)
T ss_dssp TTE--EEEEECCSSCSCCCCEECCEEECCTT-SCHHHHHHHHHHHHSCEEEE
T ss_pred CCE--EEEEEcCCCCCCCCEEECCceecCCC-CCHHHHHHHHHHHHHCCeee
Confidence 565 88888766655556899999999998 99999999999999999865
No 38
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.27 E-value=4.1e-12 Score=99.35 Aligned_cols=54 Identities=20% Similarity=0.271 Sum_probs=43.7
Q ss_pred EEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 152 LLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 152 i~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
+.+.+++ +||+++.+.+...+.|+||||.+|+| |++.+||+||++||||+++..
T Consensus 36 i~~~~~~--vLL~~r~~~~~~~g~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~~ 89 (158)
T 3hhj_A 36 LLDQDNR--VLLTQRPEGKSLAGLWEFPGGKVEQG-ETPEASLIRELEEELGVHVQA 89 (158)
T ss_dssp EBCTTSE--EEEEECCCTTSCCCCCBCCEEECCTT-CCHHHHHHHHHHHHHCCBCCG
T ss_pred EEeCCCE--EEEEEeCCCCCCCCEEECCceeecCC-CCHHHHHHHHHHHHhCcEeec
Confidence 3343565 88888765555556899999999998 999999999999999998653
No 39
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.27 E-value=2.3e-12 Score=100.85 Aligned_cols=53 Identities=26% Similarity=0.229 Sum_probs=39.8
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+|+++++ +.+++ +||+++ . ...|+||||.+|+| |++.+||+||++||||+++.
T Consensus 23 ~v~~ii~-~~~~~--vLL~~r--~---~~~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~ 75 (153)
T 3eds_A 23 SVAAVIK-NEQGE--ILFQYP--G---GEYWSLPAGAIELG-ETPEEAVVREVWEETGLKVQ 75 (153)
T ss_dssp EEEEEEB-CTTCC--EEEECC--------CBBCSEEECCTT-SCHHHHHHHHHHHHHCEEEE
T ss_pred eEEEEEE-cCCCe--EEEEEc--C---CCcEECCccccCCC-CCHHHHHHHHHHHHHCccce
Confidence 4554544 43566 676543 3 34699999999998 99999999999999999865
No 40
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.27 E-value=6.4e-12 Score=102.73 Aligned_cols=53 Identities=11% Similarity=0.095 Sum_probs=41.2
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCc
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLD 205 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~ 205 (210)
+++++++.. ++. .+||+++.+. ..|++|||.+|+| |++.+||+||++||||++
T Consensus 47 ~~~~vv~~~-~~~-~vLL~~r~~~----g~w~lPgG~ve~g-Es~~eaa~REl~EEtGl~ 99 (197)
T 3fcm_A 47 TSSAFAVNK-ERN-KFLMIHHNIY----NSWAWTGGHSDNE-KDQLKVAIKELKEETGVK 99 (197)
T ss_dssp EEEEEEECT-TSC-EEEEEEETTT----TEEECEEEECTTC-CBHHHHHHHHHHHHHCCS
T ss_pred EEEEEEEEC-CCC-EEEEEEecCC----CCEECCccccCCC-CCHHHHHHHHHHHHHCCC
Confidence 444555554 442 3888876532 3799999999998 999999999999999997
No 41
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.26 E-value=1e-11 Score=97.42 Aligned_cols=47 Identities=17% Similarity=0.039 Sum_probs=37.5
Q ss_pred CceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 157 GETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 157 g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
++..+||+++. .+ ...|+||||.+|+| |++.+||+||++||||+++.
T Consensus 22 ~~~e~LL~~r~-~~--~~~W~lPgG~ve~g-Et~~~aa~REl~EEtGl~~~ 68 (155)
T 3u53_A 22 NAIEFLLLQAS-DG--IHHWTPPKGHVEPG-EDDLETALRETQEEAGIEAG 68 (155)
T ss_dssp CSEEEEEEEES-SS--SCCEECSEEECCSS-CCHHHHHHHHHHHHHCCCGG
T ss_pred CCcEEEEEEec-CC--CCCEECCeeeccCC-CCHHHHHHHHHHHHHCCccc
Confidence 44457777543 32 23599999999998 99999999999999999754
No 42
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.25 E-value=4e-12 Score=110.77 Aligned_cols=58 Identities=24% Similarity=0.237 Sum_probs=46.4
Q ss_pred CEEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 145 PAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 145 ~aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
.+|+++++.+.+|+ +||++|++.+ ..|++|||++|+| |++++||+||++||||+++..
T Consensus 102 ~~v~avv~~~~~~~--vLLv~r~~~~---g~W~lPgG~ve~g-Es~~eAA~REl~EEtGl~~~~ 159 (271)
T 2a6t_A 102 PVRGAIMLDMSMQQ--CVLVKGWKAS---SGWGFPKGKIDKD-ESDVDCAIREVYEETGFDCSS 159 (271)
T ss_dssp CEEEEEEBCSSSSE--EEEEEESSTT---CCCBCSEEECCTT-CCHHHHHHHHHHHHHCCCCTT
T ss_pred CeEEEEEEECCCCE--EEEEEEeCCC---CeEECCcccCCCC-cCHHHHHHHHHHHHhCCCcee
Confidence 45666665542355 8999987753 3599999999998 999999999999999998753
No 43
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.25 E-value=1.7e-12 Score=97.04 Aligned_cols=49 Identities=18% Similarity=0.146 Sum_probs=41.3
Q ss_pred CCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 156 EGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 156 ~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+|+ ++|+++.+.+...+.|++|||.+|+| |++.+||.||++||||+++.
T Consensus 15 ~~~--vLl~~r~~~~~~~g~w~~PgG~~e~g-E~~~~aa~RE~~EE~G~~~~ 63 (129)
T 1mut_A 15 NNE--IFITRRAADAHMANKLEFPGGKIEMG-ETPEQAVVRELQEEVGITPQ 63 (129)
T ss_dssp TTE--EEEEECSSCCSSSCCEECCCCCSSSC-SSTTHHHHHHHHTTTCCSSC
T ss_pred CCE--EEEEEeCCCCCCCCeEECCccCcCCC-CCHHHHHHHHHHHHhCCccc
Confidence 565 88887766544456799999999998 99999999999999999764
No 44
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.24 E-value=8.8e-12 Score=101.13 Aligned_cols=60 Identities=27% Similarity=0.319 Sum_probs=43.1
Q ss_pred EEEEEEEEcCCCceEEEEEEEeec-CCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILLDSEGETYAILTEQVRV-PTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~-p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+++++++.. +|+.++||+++.+. +.....|+||||.+|+| |++.+||+||++||||+++.
T Consensus 36 ~~~~v~i~~-~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~ 96 (194)
T 1nqz_A 36 AAVLVALTR-EADPRVLLTVRSSELPTHKGQIAFPGGSLDAG-ETPTQAALREAQEEVALDPA 96 (194)
T ss_dssp EEEEEEEES-SSSCBBCEEEEC------CCCEECSEEECCTT-CCHHHHHHHHHHHHHCCCGG
T ss_pred EEEEEEEec-CCCeEEEEEEecCCCCCCCCeEECCcccCCCC-CCHHHHHHHHHHHHHCCCcc
Confidence 444555544 56223888887543 22344799999999998 99999999999999999764
No 45
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.23 E-value=3.3e-12 Score=98.25 Aligned_cols=55 Identities=16% Similarity=0.253 Sum_probs=41.9
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+++++++.+++++ +||+++.+ ...|++|||.+|+| |++.+||+||++||||+++.
T Consensus 6 ~~~~~i~~~~~~~--vLl~~r~~----~g~w~~PgG~ve~g-Es~~~aa~RE~~EEtGl~~~ 60 (146)
T 2jvb_A 6 VRGAAIFNENLSK--ILLVQGTE----SDSWSFPRGKISKD-ENDIDCCIREVKEEIGFDLT 60 (146)
T ss_dssp CEEEEEBCTTSSE--EEEECCSS----SSCCBCCEECCCSS-SCHHHHHHHHHHHHTSCCCS
T ss_pred EEEEEEEeCCCCE--EEEEEEcC----CCcEECCcccCCCC-CCHHHHHHHHHHHHHCCCch
Confidence 4555555442255 77776432 24699999999998 99999999999999999865
No 46
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.23 E-value=6.9e-12 Score=99.11 Aligned_cols=45 Identities=22% Similarity=0.245 Sum_probs=37.7
Q ss_pred EEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 161 AILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 161 vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+||+++.+.+.. ..|+||||.+|+| |++.+||+||++||||+++.
T Consensus 25 vLL~~r~~~~~~-g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~ 69 (161)
T 3exq_A 25 VLVEDKVNVPWK-AGHSFPGGHVEVG-EPCATAAIREVFEETGLRLS 69 (161)
T ss_dssp EEEECCCCCTTT-CSBBCCCCBCCTT-SCHHHHHHHHHHHHHCCEES
T ss_pred EEEEEccCCCCC-CCEEccceecCCC-CCHHHHHHHHHHHhhCcEec
Confidence 888876644333 3599999999998 99999999999999999865
No 47
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.23 E-value=4.5e-12 Score=97.05 Aligned_cols=56 Identities=16% Similarity=0.094 Sum_probs=42.9
Q ss_pred CCEEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 144 GPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 144 ~~aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
..+|+++++.+.+++ +||+++ .+ ..|++|||.+|+| |++.+||.||++||||+++.
T Consensus 18 ~~~~~~vi~~~~~~~--vLl~~r--~~---g~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~ 73 (148)
T 2azw_A 18 RYAAYIIVSKPENNT--MVLVQA--PN---GAYFLPGGEIEGT-ETKEEAIHREVLEELGISVE 73 (148)
T ss_dssp CCEEEEECEEGGGTE--EEEEEC--TT---SCEECSEEECCTT-CCHHHHHHHHHHHHHSEEEE
T ss_pred eeEEEEEEECCCCCe--EEEEEc--CC---CCEeCCCcccCCC-CCHHHHHHHHHHHHhCCeeE
Confidence 345655655543455 777763 22 3699999999998 99999999999999999864
No 48
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.22 E-value=9.4e-12 Score=97.69 Aligned_cols=53 Identities=13% Similarity=0.198 Sum_probs=41.3
Q ss_pred EEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 147 VAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 147 V~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
|+++++ + +|+ +||+++.+ ...|++|||.+|+| |++.+||+||++||||+++..
T Consensus 4 ~~~vi~-~-~~~--vLL~~r~~----~g~W~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~ 56 (156)
T 1k2e_A 4 TSGVLV-E-NGK--VLLVKHKR----LGVYIYPGGHVEHN-ETPIEAVKREFEEETGIVVEP 56 (156)
T ss_dssp EEEECE-E-TTE--EEEEECTT----TCSEECSEEECCTT-CCHHHHHHHHHHHHHSEEEEE
T ss_pred EEEEEE-E-CCE--EEEEEEcC----CCcEECCeeecCCC-CCHHHHHHHHHHHHHCCccee
Confidence 444444 3 566 77776543 23699999999998 999999999999999998754
No 49
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.21 E-value=1.4e-11 Score=98.23 Aligned_cols=55 Identities=16% Similarity=0.214 Sum_probs=43.4
Q ss_pred CEEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 145 PAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 145 ~aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
.+|+++++.. +|+ +||+++.+ ...|++|||.+|+| |++.+||.||++||||+++.
T Consensus 9 ~~v~~~i~~~-~~~--vLl~~r~~----~~~w~~p~G~~e~g-E~~~~aa~RE~~EE~G~~~~ 63 (164)
T 2kdv_A 9 PNVGIVICNR-QGQ--VMWARRFG----QHSWQFPQGGINPG-ESAEQAMYRELFEEVGLSRK 63 (164)
T ss_dssp EEEEEEEECT-TSE--EEEEEETT----CCCEECCEEECCTT-CCHHHHHHHHHHHHHCCCGG
T ss_pred cEEEEEEEcc-CCE--EEEEEEcC----CCeEECCeeecCCC-CCHHHHHHHHHHHHHCCCcc
Confidence 3566666644 565 77776543 24699999999998 99999999999999999764
No 50
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.21 E-value=2.2e-11 Score=102.94 Aligned_cols=60 Identities=20% Similarity=0.201 Sum_probs=44.7
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+|+++++...+++..+||+++.+.+. ...|++|||.+|+| |++.+||+||++||||+++.
T Consensus 15 ~v~~vi~~~~~~~~~vLLv~r~~~~~-~g~w~lPGG~ve~g-Es~~~Aa~REl~EEtGl~~~ 74 (226)
T 2fb1_A 15 GIDCIIFGFNEGEISLLLLKRNFEPA-MGEWSLMGGFVQKD-ESVDDAAKRVLAELTGLENV 74 (226)
T ss_dssp EEEEEEEEEETTEEEEEEEECSSSSS-TTCEECEEEECCTT-SCHHHHHHHHHHHHHCCCSC
T ss_pred EEEEEEEEEeCCCCEEEEEECcCCCC-CCCEECCeeccCCC-CCHHHHHHHHHHHHHCCCCC
Confidence 44444443112333488888876554 34699999999998 99999999999999999864
No 51
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.20 E-value=2.3e-11 Score=98.49 Aligned_cols=59 Identities=10% Similarity=0.086 Sum_probs=43.9
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecC-CCCeEEEe-eceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVP-TGRVILEL-PAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p-~~~~~wEl-PaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
+|+++++.. +|+ ++|+++.... ...+.|++ |||.+|+| |++.+||+||++||||+++..
T Consensus 34 ~v~~~i~~~-~g~--vLl~~R~~~~~~~~g~w~~~PgG~ve~g-Et~~~aa~REl~EEtGl~~~~ 94 (190)
T 1hzt_A 34 AFSSWLFNA-KGQ--LLVTRRALSKKAWPGVWTNSVCGHPQLG-ESNEDAVIRRCRYELGVEITP 94 (190)
T ss_dssp CEEEEEECT-TCC--EEEEEECTTCSSSTTCEEESEEECCCTT-CCHHHHHHHHHHHHHCCCBSC
T ss_pred EEEEEEEcC-CCE--EEEEEeCCCCCCCCCcccCcccccCCCC-CCHHHHHHHHHHHHHCCCchh
Confidence 556665543 566 7776653221 12347999 99999998 999999999999999998653
No 52
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.19 E-value=3.3e-11 Score=93.47 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=30.0
Q ss_pred EEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 176 LELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 176 wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
|++|||.+|+| |++.+||+||++||||+++..
T Consensus 38 w~lPgG~ve~g-E~~~~aa~RE~~EEtGl~~~~ 69 (155)
T 2b06_A 38 YAFPGGHVEND-EAFAESVIREIYEETGLTIQN 69 (155)
T ss_dssp EECCCCBCCTT-SCHHHHHHHHHHHHHSEEEES
T ss_pred EeccceecCCC-CCHHHHHHHHHHHHhCccccC
Confidence 89999999998 999999999999999998753
No 53
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.18 E-value=1.3e-11 Score=97.61 Aligned_cols=59 Identities=12% Similarity=0.090 Sum_probs=43.2
Q ss_pred EEEEEEEEcCCCceEEEEEEEeec-CCCCeEEE-eeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 146 AVAVLILLDSEGETYAILTEQVRV-PTGRVILE-LPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~-p~~~~~wE-lPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
+|++++++. +|+ ++|+++... ....+.|+ +|||.+|+| |++.+||+||++||||+++..
T Consensus 36 ~v~v~i~~~-~~~--vLl~~r~~~~~~~~g~w~~~PgG~ve~g-Es~~~aa~REl~EEtGl~~~~ 96 (171)
T 1q27_A 36 VVNAFLRNS-QGQ--LWIPRRSPSKSLFPNALDVSVGGAVQSG-ETYEEAFRREAREELNVEIDA 96 (171)
T ss_dssp EEEEEEEET-TTE--EEECCSCCSSSCCCCSCCCSEEEECSSS-SCHHHHHHHHHHHHHSCTTSS
T ss_pred EEEEEEECC-CCe--EEEEEecCCCCCCCCccccccCccccCC-CCHHHHHHHHHHHHHCCcccc
Confidence 455565554 565 666653221 12245799 999999998 999999999999999998643
No 54
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.17 E-value=3.4e-11 Score=98.39 Aligned_cols=53 Identities=21% Similarity=0.228 Sum_probs=41.3
Q ss_pred EEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 147 VAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 147 V~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
++++++.+ +|+ +||+++.+ ...|++|||.+|+| |++.+||+||++||||+++.
T Consensus 6 v~~~vi~~-~~~--vLL~~r~~----~g~W~lPGG~ve~g-Es~~~aa~REl~EEtGl~~~ 58 (188)
T 3fk9_A 6 VTNCIVVD-HDQ--VLLLQKPR----RGWWVAPGGKMEAG-ESILETVKREYWEETGITVK 58 (188)
T ss_dssp EEEEEEEE-TTE--EEEEECTT----TCCEECCEEECCTT-CCHHHHHHHHHHHHHSCEES
T ss_pred EEEEEEEE-CCE--EEEEEeCC----CCeEECCeecccCC-CCHHHHHHHHHHHHHCCCCC
Confidence 44444444 565 78877532 34699999999998 99999999999999999865
No 55
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.17 E-value=3.1e-11 Score=93.71 Aligned_cols=51 Identities=18% Similarity=0.150 Sum_probs=40.5
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+|+++++ + +|+ +||+++ ...|++|||.+|+| |++.+||+||++||||+++.
T Consensus 21 ~~~~ii~-~-~~~--vLl~~r------~~~w~lPgG~ve~g-E~~~~aa~REl~EEtGl~~~ 71 (154)
T 2pqv_A 21 RATALIV-Q-NHK--LLVTKD------KGKYYTIGGAIQVN-ESTEDAVVREVKEELGVKAQ 71 (154)
T ss_dssp EEEECCE-E-TTE--EEEEEE------TTEEECEEEECBTT-CCHHHHHHHHHHHHHCCCEE
T ss_pred EEEEEEE-E-CCE--EEEEec------CCeEECcccCcCCC-CCHHHHHHHHHHHHhCCeee
Confidence 3444444 3 465 777776 23699999999998 99999999999999999865
No 56
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.17 E-value=3.9e-11 Score=95.61 Aligned_cols=55 Identities=20% Similarity=0.255 Sum_probs=41.4
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCC---CeEEEe-eceeeCCCCCCHHHHHHHHHHHHhCCce
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTG---RVILEL-PAGMLDDDKGDFVGTAVREVSFILLLDF 206 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~---~~~wEl-PaG~vd~g~Es~~~aA~REl~EETGi~v 206 (210)
++++++++. +|+ +||++ |.+.+ .+.|+| |||.+|+| |++.+||+||++||||+++
T Consensus 39 ~~~v~i~~~-~~~--vLl~~--R~~~~~~~~g~w~l~pGG~ve~g-E~~~~aa~REl~EEtGl~~ 97 (180)
T 2fkb_A 39 ATYIVVHDG-MGK--ILVQR--RTETKDFLPGMLDATAGGVVQAD-EQLLESARREAEEELGIAG 97 (180)
T ss_dssp EEEEEEECS-SSC--EEEEE--ECSSCSSSTTCEESSBCCBCBTT-CCHHHHHHHHHHHHHCCBS
T ss_pred EEEEEEECC-CCE--EEEEE--CCCCCccCCCcEEeecCCCCCCC-CCHHHHHHHHHHHHHCCCc
Confidence 555555543 566 66644 44322 346999 99999998 9999999999999999975
No 57
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.16 E-value=2.4e-11 Score=97.61 Aligned_cols=44 Identities=16% Similarity=0.075 Sum_probs=36.0
Q ss_pred CCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 156 EGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 156 ~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+++ +||+++. ...|++|||.+|+| |++.+||+||++||||+++.
T Consensus 26 ~~~--vLL~~r~-----~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~ 69 (163)
T 3f13_A 26 PDG--VLVTASR-----GGRYNLPGGKANRG-ELRSQALIREIREETGLRIN 69 (163)
T ss_dssp TTE--EEEEECC--------BBCSEEECCTT-CCHHHHHHHHHHHHHCCCCC
T ss_pred CCE--EEEEEEC-----CCeEECCceeCCCC-CCHHHHHHHHHHHHHCcccc
Confidence 565 7777653 23699999999998 99999999999999999864
No 58
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.15 E-value=3.1e-11 Score=105.40 Aligned_cols=47 Identities=15% Similarity=0.158 Sum_probs=41.1
Q ss_pred CCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 156 EGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 156 ~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+++ +||+++.+.+. ..|++|||.+|+| |++++||+||++||||+++.
T Consensus 150 ~~~--vLL~rr~~~~~--g~w~lPgG~vE~G-Et~eeAa~REv~EEtGl~v~ 196 (269)
T 1vk6_A 150 DDS--ILLAQHTRHRN--GVHTVLAGFVEVG-ETLEQAVAREVMEESGIKVK 196 (269)
T ss_dssp TTE--EEEEEETTTCS--SCCBCEEEECCTT-CCHHHHHHHHHHHHHCCEEE
T ss_pred CCE--EEEEEecCCCC--CcEECCcCcCCCC-CCHHHHHHHHHHHHhCceee
Confidence 565 89998877663 3699999999998 99999999999999999875
No 59
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.15 E-value=4.5e-11 Score=98.89 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=40.3
Q ss_pred EEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 147 VAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 147 V~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
|+++++ + +|+ +||+++.. .+.|++|||.+|+| |++.+||+||++||||+++.
T Consensus 71 v~~vv~-~-~~~--vLLv~r~~----~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~v~ 122 (205)
T 3q1p_A 71 IRAVVF-Q-NEK--LLFVKEKS----DGKWALPGGWADVG-YTPTEVAAKEVFEETGYEVD 122 (205)
T ss_dssp EEEEEE-E-TTE--EEEEEC-------CCEECSEEECCTT-CCHHHHHHHHHHHHHSEEEE
T ss_pred EEEEEE-E-CCE--EEEEEEcC----CCcEECCcCccCCC-CCHHHHHHHHHHHHHCCccc
Confidence 444444 3 465 88887652 23699999999998 99999999999999999875
No 60
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.14 E-value=5.8e-11 Score=101.24 Aligned_cols=60 Identities=17% Similarity=0.258 Sum_probs=44.4
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCC--CCCCHHHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDD--DKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~--g~Es~~~aA~REl~EETGi~v~ 207 (210)
+|+++++.-.+++..+||+++.+.+. ...|++|||.+|+ | |++.+||+||++||||+++.
T Consensus 24 ~v~~vi~~~~~~~~~vLLv~R~~~~~-~g~W~lPGG~ve~~~g-Es~~~AA~REl~EEtGl~~~ 85 (240)
T 3gz5_A 24 TVDAVLFTYHDQQLKVLLVQRSNHPF-LGLWGLPGGFIDETCD-ESLEQTVLRKLAEKTAVVPP 85 (240)
T ss_dssp EEEEEEEEEETTEEEEEEEECCSSSS-TTCEECSEEECCTTTC-SBHHHHHHHHHHHHHSSCCS
T ss_pred EEEEEEEEEeCCCcEEEEEECcCCCC-CCCEECCccccCCCCC-cCHHHHHHHHHHHHHCCCCC
Confidence 34444432223434588888776554 3469999999999 8 99999999999999999764
No 61
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.13 E-value=9.2e-11 Score=101.78 Aligned_cols=48 Identities=15% Similarity=0.155 Sum_probs=40.7
Q ss_pred ceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 158 ETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 158 ~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+..+||+++.+.+.. +.|+||||.+|+| |++.+||+||++||||+++.
T Consensus 55 ~~~VLLv~R~~~p~~-g~W~lPGG~ve~g-Es~~~AA~REl~EEtGl~v~ 102 (273)
T 2fml_A 55 QLKVLLIQRKGHPFR-NSWALPGGFVNRN-ESTEDSVLRETKEETGVVIS 102 (273)
T ss_dssp EEEEEEEEECSSSST-TCEECCEEECCTT-SCHHHHHHHHHHHHHCCCCC
T ss_pred CcEEEEEEccCCCCC-CcEECCccCCCCC-cCHHHHHHHHHHHHHCCCCC
Confidence 445999988776543 4799999999998 99999999999999997653
No 62
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.12 E-value=6.1e-11 Score=98.16 Aligned_cols=44 Identities=27% Similarity=0.298 Sum_probs=37.8
Q ss_pred CCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 156 EGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 156 ~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+|+ +||+++. ...|+||||.+|+| |++.+||+||++||||+++.
T Consensus 80 ~~~--vLLvrr~-----~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~ 123 (206)
T 3o8s_A 80 EDK--ILLVQEN-----DGLWSLPGGWCDVD-QSVKDNVVKEVKEEAGLDVE 123 (206)
T ss_dssp TTE--EEEEECT-----TSCEECSEEECCTT-SCHHHHHHHHHHHHHCEEEE
T ss_pred CCE--EEEEEec-----CCeEECCeeccCCC-CCHHHHHHHHHHHHHCCcce
Confidence 465 8888754 24699999999998 99999999999999999865
No 63
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.11 E-value=7.3e-11 Score=103.68 Aligned_cols=56 Identities=20% Similarity=0.387 Sum_probs=44.8
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+|+++++ + +++ +||+++.+.+ +...|++|||.+|+| |++++||+||++||||+++.
T Consensus 210 ~v~~vv~-~-~~~--vLL~~r~~~~-~~g~w~lPgG~ve~g-Et~~~aa~REl~EEtGl~v~ 265 (352)
T 2qjt_B 210 TVDALVI-V-NDH--ILMVQRKAHP-GKDLWALPGGFLECD-ETIAQAIIRELFEETNINLT 265 (352)
T ss_dssp EEEEEEE-E-TTE--EEEEEESSSS-STTCEECSEEECCTT-SCHHHHHHHHHHHHHCCSCC
T ss_pred EEEEEEE-E-CCE--EEEEEEcCCC-CCCeEECCCCcCCCC-CCHHHHHHHHHHHhhCCCcc
Confidence 4444444 3 566 8888887655 345799999999998 99999999999999999865
No 64
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.11 E-value=7.9e-11 Score=102.66 Aligned_cols=56 Identities=16% Similarity=0.348 Sum_probs=44.2
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+|+++++ + +|+ +||+++.+.+. ...|++|||.+|+| |++++||+||++||||+++.
T Consensus 205 ~v~~vi~-~-~~~--vLL~~r~~~~~-~g~w~lPgG~ve~g-E~~~~aa~REl~EEtGl~~~ 260 (341)
T 2qjo_A 205 TTDAVVV-Q-AGH--VLMVRRQAKPG-LGLIALPGGFIKQN-ETLVEGMLRELKEETRLKVP 260 (341)
T ss_dssp EEEEEEE-E-TTE--EEEEECCSSSS-TTCEECSEEECCTT-SCHHHHHHHHHHHHHCCSSC
T ss_pred EEEEEEE-e-CCE--EEEEEecCCCC-CCeEECCCCcCCCC-CCHHHHHHHHHhhhhCCccc
Confidence 3444444 3 566 88888766543 45799999999998 99999999999999999865
No 65
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.00 E-value=2e-10 Score=89.54 Aligned_cols=45 Identities=11% Similarity=0.062 Sum_probs=37.1
Q ss_pred EEEEEEeecCCCCeEEEeeceeeCCCCCCHH-HHHHHHHHHHhC-Cce
Q 028360 161 AILTEQVRVPTGRVILELPAGMLDDDKGDFV-GTAVREVSFILL-LDF 206 (210)
Q Consensus 161 vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~-~aA~REl~EETG-i~v 206 (210)
++|+++...+...+.|+||+|.+|.| |++. +||.||++|||| +++
T Consensus 36 vLl~~R~~~~~~~g~w~~PgG~~e~g-E~~~~~a~~REl~EE~g~l~~ 82 (155)
T 1x51_A 36 ILLVQRPNSGLLAGLWEFPSVTWEPS-EQLQRKALLQELQRWAGPLPA 82 (155)
T ss_dssp EEEEECCCCSTTCSCEECCEEECCSS-HHHHHHHHHHHHHHHSCCCCS
T ss_pred EEEEECCCCCCCCceecCCccccCCC-CCHHHHHHHHHHHHHhCCcce
Confidence 77777655444445899999999998 9996 999999999999 754
No 66
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=98.98 E-value=2e-10 Score=96.99 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=30.8
Q ss_pred eEEEeeceeeCCCCC-CHHHHHHHHHHHHhCCcee
Q 028360 174 VILELPAGMLDDDKG-DFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 174 ~~wElPaG~vd~g~E-s~~~aA~REl~EETGi~v~ 207 (210)
+.|+||||.+|+| | ++++||+||++||||+++.
T Consensus 75 g~w~lPGG~ve~g-E~t~~eaa~REl~EEtGl~~~ 108 (217)
T 2xsq_A 75 GRLGFPGGFVDTQ-DRSLEDGLNRELREELGEAAA 108 (217)
T ss_dssp SCEECSEEECCTT-CSSHHHHHHHHHHHHHCGGGG
T ss_pred CeEECCceecCCC-CCCHHHHHHHHHHHHHCCCCc
Confidence 3699999999998 9 9999999999999999875
No 67
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=98.96 E-value=8.4e-10 Score=98.55 Aligned_cols=46 Identities=17% Similarity=0.115 Sum_probs=38.4
Q ss_pred ceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 158 ETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 158 ~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
+.++||+++.+. ..|+||||.+|+| |++.+||+||++||||+++..
T Consensus 37 ~~~vLLv~r~~~----g~W~lPgG~ve~g-Es~~~AA~REl~EEtGl~~~~ 82 (364)
T 3fjy_A 37 SIEVCIVHRPKY----DDWSWPKGKLEQN-ETHRHAAVREIGEETGSPVKL 82 (364)
T ss_dssp TEEEEEEEETTT----TEEECCEEECCTT-CCHHHHHHHHHHHHHSCCEEE
T ss_pred ceEEEEEEcCCC----CCEECCcCCCCCC-CCHHHHHHHHHHHHhCCeeee
Confidence 345888876332 4699999999998 999999999999999998753
No 68
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=98.79 E-value=1.9e-09 Score=91.60 Aligned_cols=54 Identities=15% Similarity=0.269 Sum_probs=36.4
Q ss_pred EEEEcCCCceEEEEEEEeecCC---CCeEEEe-eceeeCCCCCC------HHHHHHHHHHHHhCCcee
Q 028360 150 LILLDSEGETYAILTEQVRVPT---GRVILEL-PAGMLDDDKGD------FVGTAVREVSFILLLDFL 207 (210)
Q Consensus 150 Lvi~~~~g~~~vlLvrQ~R~p~---~~~~wEl-PaG~vd~g~Es------~~~aA~REl~EETGi~v~ 207 (210)
+++.+ +|+ +||+++...+. -...|++ |||++|+| |+ +++||+||++||||+++.
T Consensus 73 ~II~~-~gr--vLl~~R~~~~~e~~~~g~w~~gPGGhVE~G-Es~~p~EtleeAa~REl~EEtGl~v~ 136 (211)
T 3e57_A 73 VVIMD-GDR--VLITKRTTKQSEKRLHNLYSLGIGGHVREG-DGATPREAFLKGLEREVNEEVDVSLR 136 (211)
T ss_dssp EEEEE-TTE--EEEEEC------------CBSSEECCCBGG-GCSSHHHHHHHHHHHHHHHHEEEEEE
T ss_pred EEEEE-CCE--EEEEEECCCCCcccccCCcccccceEEeCC-CCCCchhhHHHHHHHHHHHHhCCeee
Confidence 33444 566 77766544331 1136889 99999998 88 499999999999999864
No 69
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=98.77 E-value=8.8e-09 Score=90.49 Aligned_cols=43 Identities=19% Similarity=0.169 Sum_probs=35.4
Q ss_pred eEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCce
Q 028360 159 TYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDF 206 (210)
Q Consensus 159 ~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v 206 (210)
.++||+++.. . ..|+||||++|+| |++.+||+||++||||+++
T Consensus 139 l~vLl~~r~~--~--g~W~lPGG~Ve~G-Es~~eAA~REl~EETGl~~ 181 (292)
T 1q33_A 139 LQFVAIKRKD--C--GEWAIPGGMVDPG-EKISATLKREFGEEALNSL 181 (292)
T ss_dssp EEEEEEECTT--T--CSEECCCEECCTT-CCHHHHHHHHHHHHHSCGG
T ss_pred eEEEEEEecC--C--CcEeCCCcccCCC-CCHHHHHHHHHHHHhCCcc
Confidence 3577765432 2 3699999999998 9999999999999999973
No 70
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.68 E-value=1e-08 Score=87.86 Aligned_cols=61 Identities=15% Similarity=0.202 Sum_probs=41.6
Q ss_pred EEEEEEEEcCCCc-eEEEEEEEeecCC-CCeEEEeeceeeCCCCCC--------------------HHHHHHHHHHHHhC
Q 028360 146 AVAVLILLDSEGE-TYAILTEQVRVPT-GRVILELPAGMLDDDKGD--------------------FVGTAVREVSFILL 203 (210)
Q Consensus 146 aV~VLvi~~~~g~-~~vlLvrQ~R~p~-~~~~wElPaG~vd~g~Es--------------------~~~aA~REl~EETG 203 (210)
+++++++.+.++. .+|+|+++..... ..+.|.||||.+|++ |+ +..||+||++||||
T Consensus 10 aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~-d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE~G 88 (232)
T 3qsj_A 10 AATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPS-DAEMAKRAFGRPVCAEDDDDPALAVTALRETAEEIG 88 (232)
T ss_dssp EEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHH-HHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecC-CCCchhhhcccccccccchhhHHHHHHHHHHHHHhC
Confidence 4444444442222 3577776554332 234799999999997 54 58999999999999
Q ss_pred Ccee
Q 028360 204 LDFL 207 (210)
Q Consensus 204 i~v~ 207 (210)
+.+.
T Consensus 89 l~l~ 92 (232)
T 3qsj_A 89 WLLA 92 (232)
T ss_dssp CCCS
T ss_pred ceec
Confidence 9753
No 71
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=98.64 E-value=2.1e-08 Score=90.49 Aligned_cols=55 Identities=20% Similarity=0.150 Sum_probs=41.6
Q ss_pred EEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCCceec
Q 028360 150 LILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLLDFLL 208 (210)
Q Consensus 150 Lvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi~v~~ 208 (210)
+++.+.+|+ ++|+++...+...+.|+||||.+|+| ++++||.||++||||+++..
T Consensus 245 ~vi~~~~g~--vLL~rR~~~g~~~GlWefPGG~ve~g--t~~~al~REl~EE~Gl~v~~ 299 (369)
T 3fsp_A 245 AVLADDEGR--VLIRKRDSTGLLANLWEFPSCETDGA--DGKEKLEQMVGEQYGLQVEL 299 (369)
T ss_dssp EEEECSSSE--EEEEECCSSSTTTTCEECCEEECSSS--CTHHHHHHHHTTSSSCCEEE
T ss_pred EEEEeCCCE--EEEEECCCCCCcCCcccCCCcccCCC--CcHHHHHHHHHHHhCCceee
Confidence 334443566 77776554444445799999999986 89999999999999998753
No 72
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=98.48 E-value=1e-07 Score=81.24 Aligned_cols=57 Identities=16% Similarity=0.104 Sum_probs=40.0
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCC---CCeEEEeec-eeeCCCC-----CC---HHHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPT---GRVILELPA-GMLDDDK-----GD---FVGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~---~~~~wElPa-G~vd~g~-----Es---~~~aA~REl~EETGi~v~ 207 (210)
+|+|++++. +|+ ++|.+ |... ..+.|++|+ |.+++|+ |+ +.+||+||++||||+++.
T Consensus 61 av~v~v~~~-~g~--lLLq~--R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~ 129 (235)
T 2dho_A 61 AFSVFLFNT-ENK--LLLQQ--RSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLE 129 (235)
T ss_dssp EEEEEEECT-TCC--EEEEE--ECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGG
T ss_pred EEEEEEEcC-CCE--EEEEE--ecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCcc
Confidence 566665543 676 66644 4332 234799994 9999861 56 599999999999999753
No 73
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.44 E-value=4.1e-07 Score=77.38 Aligned_cols=51 Identities=27% Similarity=0.275 Sum_probs=38.6
Q ss_pred EEEEEEEcCCCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHhCC
Q 028360 147 VAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFILLL 204 (210)
Q Consensus 147 V~VLvi~~~~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EETGi 204 (210)
+||+++.+ .+..++||++. . . ..|+||||.+++| |+.++|.+|||.||+|.
T Consensus 62 ~avil~~~-~~~phVLLlq~-~--~--~~f~LPGGkle~g-E~~~eaL~REL~EELg~ 112 (208)
T 3bho_A 62 EGVLIVHE-HRLPHVLLLQL-G--T--TFFKLPGGELNPG-EDEVEGLKRLMTEILGR 112 (208)
T ss_dssp EEEEEEEE-TTEEEEEEEEE-E--T--TEEECSEEECCTT-CCHHHHHHHHHHHHHCC
T ss_pred EEEEEEcC-CCCcEEEEEEc-C--C--CcEECCCcccCCC-CCHHHHHHHHHHHHhCC
Confidence 34444433 45455777764 2 1 2799999999999 99999999999999994
No 74
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=98.37 E-value=2.2e-07 Score=79.88 Aligned_cols=57 Identities=14% Similarity=0.016 Sum_probs=39.7
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCC---CCeEEEeec-eeeCCC-----CCCH---HHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPT---GRVILELPA-GMLDDD-----KGDF---VGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~---~~~~wElPa-G~vd~g-----~Es~---~~aA~REl~EETGi~v~ 207 (210)
+|+|++++. +|+ ++|.+ |... ..+.|++|+ |.+++| +|++ .+||+||++||||+++.
T Consensus 72 av~v~v~~~-~g~--lLLqr--Rs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~ 140 (246)
T 2pny_A 72 AFSVVLFNT-KNR--ILIQQ--RSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGE 140 (246)
T ss_dssp EEEEEEECT-TCC--EEEEE--ECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTT
T ss_pred EEEEEEEeC-CCE--EEEEE--ecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCcc
Confidence 556665543 676 66644 4332 234799995 889875 1676 99999999999999753
No 75
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=98.32 E-value=7.1e-07 Score=79.34 Aligned_cols=59 Identities=15% Similarity=0.052 Sum_probs=42.5
Q ss_pred EEEEEEEEcCCCceEEEEEEEeecCC---CCeEE-EeeceeeCCCCCCHHHHHHHHHHHHhCCcee
Q 028360 146 AVAVLILLDSEGETYAILTEQVRVPT---GRVIL-ELPAGMLDDDKGDFVGTAVREVSFILLLDFL 207 (210)
Q Consensus 146 aV~VLvi~~~~g~~~vlLvrQ~R~p~---~~~~w-ElPaG~vd~g~Es~~~aA~REl~EETGi~v~ 207 (210)
+|-|.+++.+++..++++.+ |... ..+.| ..+||++++| |++.+||.||+.||+|+...
T Consensus 120 ~vh~~~~~~~~~~~~lll~r--Rs~~K~~~PG~wd~svaG~i~~G-Es~~eaA~REl~EElGI~~~ 182 (300)
T 3dup_A 120 GVHLNGYVGAGADLHLWIGR--RSPDKSVAPGKLDNMVAGGQPAD-LSLRQNLIKECAEEADLPEA 182 (300)
T ss_dssp EEEEEEEESCGGGCEEEEEE--ECTTCSSSTTCEEESEEEECCTT-SCHHHHHHHHHHHHHCCCHH
T ss_pred EEEEEEEEecCCeeEEEEEe--CCCcccCCCCccccccccCCCCC-CCHHHHHHHHHHHHhCCChh
Confidence 45667776633332355544 4333 34578 6999999998 99999999999999999753
No 76
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.11 E-value=9.8e-07 Score=75.02 Aligned_cols=36 Identities=22% Similarity=0.232 Sum_probs=29.7
Q ss_pred EEeecCCCCeEEEeeceeeCCCCC-CHHHHHHHHHHHHhCC
Q 028360 165 EQVRVPTGRVILELPAGMLDDDKG-DFVGTAVREVSFILLL 204 (210)
Q Consensus 165 rQ~R~p~~~~~wElPaG~vd~g~E-s~~~aA~REl~EETGi 204 (210)
.|.|.. +.||||||.||+| | ++++|..|||.||+|+
T Consensus 48 mQ~R~~---G~weFPGGkVe~g-E~t~e~aL~REl~EElg~ 84 (214)
T 3kvh_A 48 MQMRFD---GLLGFPGGFVDRR-FWSLEDGLNRVLGLGLGC 84 (214)
T ss_dssp EEEETT---SCEECSEEEECTT-TCCHHHHHHHSCCSCC--
T ss_pred EeeeeC---CEEeCCCccCCCC-CCCHHHHHHHHHHHhhCC
Confidence 355654 3699999999999 7 9999999999999997
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=97.91 E-value=1e-05 Score=72.28 Aligned_cols=41 Identities=17% Similarity=0.205 Sum_probs=31.3
Q ss_pred CCceEEEEEEEeecCCCCeEEEeeceeeCCCCCCHHHHHHHHHHHHh-CCceec
Q 028360 156 EGETYAILTEQVRVPTGRVILELPAGMLDDDKGDFVGTAVREVSFIL-LLDFLL 208 (210)
Q Consensus 156 ~g~~~vlLvrQ~R~p~~~~~wElPaG~vd~g~Es~~~aA~REl~EET-Gi~v~~ 208 (210)
+|+ +||+ + ..+ |.||||.++.+ ..++|+||++||| |+++.+
T Consensus 193 ~g~--vLL~-----~-~~G-W~LPG~~~~~~---~~~~a~RE~~EEttGl~v~~ 234 (321)
T 3rh7_A 193 QGA--VFLA-----G-NET-LSLPNCTVEGG---DPARTLAAYLEQLTGLNVTI 234 (321)
T ss_dssp SSC--EEEB-----C-SSE-EBCCEEEESSS---CHHHHHHHHHHHHHSSCEEE
T ss_pred CCE--EEEe-----e-CCC-ccCCcccCCCC---hhHHHHHHHHHHhcCCEEee
Confidence 577 7887 2 245 99999877654 3459999999997 999864
No 78
>3fxt_A Nucleoside diphosphate-linked moiety X motif 6; nudix, NUDT6, GFG, FGF2AS, antisense basic fibroblast growth FGF-2 regulation, hydrolase; 2.30A {Homo sapiens}
Probab=97.45 E-value=2.8e-05 Score=60.39 Aligned_cols=76 Identities=9% Similarity=0.001 Sum_probs=61.0
Q ss_pred CCCCCeEEEe-----CCCCChhhHhhhhcchhHHHHHHHHhhccc-cccCCCcceEEEEEeeEEEE-eeeCCEEEEEEEE
Q 028360 55 QLSQPVHVVA-----APGLSESDFRCAVESTLFKQWLKNLQSETG-ILANGDMLLKQVLIQGVDMF-GKRIGFLKFKADI 127 (210)
Q Consensus 55 ~~~~gV~V~~-----~~~~s~~~~~~~l~~~~Fk~Wl~~~~~~~~-~~~~~~~~L~~~~i~s~~~f-~~r~gfl~l~~d~ 127 (210)
..|+||+|++ +..++.+.|...|+++ ++.|+++.++..| .++.....+..+.++....| +++.++++|..
T Consensus 30 DrygGV~Vd~~~l~~~~~~d~~~F~~~L~~S-L~~Wr~~gk~~IWlklpi~~s~lIp~a~~~GF~fHHAe~dylmL~~-- 106 (113)
T 3fxt_A 30 DRFGGISVRLARLDALDRLDAAAFQKGLQAA-VQQWRSEGRTAVWLHIPILQSRFIAPAASLGFCFHHAESDSSTLTL-- 106 (113)
T ss_dssp CTTSCEEEEHHHHTTTSCBCHHHHHHHHHHH-HHHHHHTTCCEEEEEEEGGGGGGHHHHHHTTCEEEEEEBTEEEEEE--
T ss_pred cCcCCEEEeCCccCCcCcCCHHHHHHHHHHH-HHHHHHcCCeeEEEEcCHHHhhhHHHHHHcCceeecCCCCeEEEEE--
Confidence 4599999997 4568999999999977 5999999998888 47777778877777755555 48899999987
Q ss_pred EEcCCCc
Q 028360 128 FCKETGQ 134 (210)
Q Consensus 128 v~l~~G~ 134 (210)
|+++|.
T Consensus 107 -WLpe~p 112 (113)
T 3fxt_A 107 -WLREGP 112 (113)
T ss_dssp -ECCC--
T ss_pred -ecCcCC
Confidence 788764
No 79
>1vig_A Vigilin; RNA-binding protein, ribonucleoprotein; NMR {Homo sapiens} SCOP: d.51.1.1 PDB: 1vih_A
Probab=25.06 E-value=36 Score=22.85 Aligned_cols=17 Identities=0% Similarity=0.045 Sum_probs=13.8
Q ss_pred HHHHHHHHHhCCceecC
Q 028360 193 TAVREVSFILLLDFLLS 209 (210)
Q Consensus 193 aA~REl~EETGi~v~~~ 209 (210)
.-.|++.||||..+.+.
T Consensus 25 ~~I~~I~e~tg~~I~i~ 41 (71)
T 1vig_A 25 ANINRIKDQYKVSVRIP 41 (71)
T ss_dssp CHHHHHHHHTCCEEECC
T ss_pred ccHHHHHHHHCCEEEEC
Confidence 34799999999988764
Done!