Query 028361
Match_columns 210
No_of_seqs 149 out of 163
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 16:59:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028361.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028361hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ct1_A Transcriptional repress 97.3 0.00019 6.5E-09 48.9 3.4 54 44-97 15-71 (77)
2 2drp_A Protein (tramtrack DNA- 97.2 0.00024 8.2E-09 46.7 3.5 54 43-96 9-65 (66)
3 3uk3_C Zinc finger protein 217 96.6 0.0017 5.7E-08 41.2 3.2 51 44-96 4-57 (57)
4 2yt9_A Zinc finger-containing 96.4 0.0027 9.4E-08 44.1 3.9 50 45-96 8-60 (95)
5 1x5w_A Zinc finger protein 64, 96.4 0.0028 9.4E-08 42.2 3.6 53 43-97 8-63 (70)
6 2ctd_A Zinc finger protein 512 96.3 0.0032 1.1E-07 45.7 3.7 50 44-96 34-87 (96)
7 2gqj_A Zinc finger protein KIA 96.2 0.0011 3.8E-08 47.6 0.9 54 43-97 23-80 (98)
8 1x6h_A Transcriptional repress 96.1 0.0039 1.4E-07 42.4 3.4 54 44-97 15-73 (86)
9 1x6e_A Zinc finger protein 24; 96.1 0.0049 1.7E-07 41.3 3.5 52 43-96 13-67 (72)
10 1bbo_A Human enhancer-binding 96.0 0.0054 1.8E-07 38.8 3.3 50 45-96 2-54 (57)
11 2eod_A TNF receptor-associated 95.9 0.004 1.4E-07 41.2 2.5 48 43-93 9-59 (66)
12 2adr_A ADR1; transcription reg 95.8 0.0078 2.7E-07 38.5 3.5 51 44-96 2-55 (60)
13 2rpc_A Zinc finger protein ZIC 95.6 0.015 5E-07 44.0 4.7 57 40-96 21-87 (155)
14 2wbt_A B-129; zinc finger; 2.7 95.5 0.01 3.5E-07 43.7 3.7 51 43-97 73-126 (129)
15 2d9k_A FLN29 gene product; zin 95.5 0.0033 1.1E-07 43.8 0.9 48 43-93 16-64 (75)
16 2ej4_A Zinc finger protein ZIC 95.5 0.021 7.1E-07 39.6 5.0 56 41-96 22-87 (95)
17 2cot_A Zinc finger protein 435 95.4 0.012 4.1E-07 39.7 3.4 52 43-96 17-71 (77)
18 2yt9_A Zinc finger-containing 95.4 0.0091 3.1E-07 41.4 2.8 54 43-96 34-90 (95)
19 2kmk_A Zinc finger protein GFI 95.4 0.0094 3.2E-07 39.9 2.7 50 44-95 29-81 (82)
20 2dmd_A Zinc finger protein 64, 95.2 0.011 3.7E-07 41.1 2.8 51 44-96 8-61 (96)
21 2dlq_A GLI-kruppel family memb 95.2 0.018 6E-07 41.5 4.0 53 44-96 35-91 (124)
22 2ee8_A Protein ODD-skipped-rel 95.2 0.022 7.6E-07 40.3 4.4 53 42-96 15-70 (106)
23 2d9h_A Zinc finger protein 692 95.2 0.0084 2.9E-07 40.5 2.0 54 43-97 6-64 (78)
24 2lce_A B-cell lymphoma 6 prote 95.2 0.023 8E-07 37.9 4.2 53 42-96 15-70 (74)
25 1a1h_A QGSR zinc finger peptid 95.0 0.015 5E-07 39.8 3.0 49 45-95 35-86 (90)
26 2dmd_A Zinc finger protein 64, 95.0 0.02 6.9E-07 39.6 3.7 52 43-96 35-89 (96)
27 2kmk_A Zinc finger protein GFI 95.0 0.015 5.3E-07 38.8 2.8 51 45-97 2-55 (82)
28 2dlq_A GLI-kruppel family memb 94.9 0.018 6E-07 41.5 3.2 53 43-97 65-120 (124)
29 2csh_A Zinc finger protein 297 94.8 0.016 5.4E-07 41.4 2.7 54 44-99 37-93 (110)
30 2lv2_A Insulinoma-associated p 94.7 0.021 7.1E-07 41.1 3.2 52 43-96 27-81 (85)
31 2ee8_A Protein ODD-skipped-rel 94.4 0.036 1.2E-06 39.1 3.8 52 43-96 44-98 (106)
32 1llm_C Chimera of ZIF23-GCN4; 94.2 0.027 9.2E-07 38.9 2.7 54 44-99 3-59 (88)
33 1llm_C Chimera of ZIF23-GCN4; 94.0 0.0078 2.7E-07 41.7 -0.4 52 44-98 31-85 (88)
34 1wjp_A Zinc finger protein 295 93.8 0.041 1.4E-06 39.2 3.1 45 44-92 16-63 (107)
35 4gzn_C ZFP-57, zinc finger pro 93.8 0.035 1.2E-06 37.4 2.6 49 44-94 4-55 (60)
36 2ytn_A Zinc finger protein 347 93.2 0.082 2.8E-06 31.8 3.3 34 44-79 12-46 (46)
37 1wjp_A Zinc finger protein 295 93.2 0.057 1.9E-06 38.4 2.9 50 44-96 42-94 (107)
38 2dmi_A Teashirt homolog 3; zin 92.9 0.047 1.6E-06 39.2 2.2 52 44-95 19-76 (115)
39 2dlk_A Novel protein; ZF-C2H2 92.8 0.089 3.1E-06 35.0 3.4 52 44-96 7-65 (79)
40 2epx_A Zinc finger protein 28 92.7 0.093 3.2E-06 31.5 3.1 35 44-79 12-47 (47)
41 2gli_A Protein (five-finger GL 92.7 0.051 1.7E-06 40.8 2.2 51 44-96 67-124 (155)
42 2ebt_A Krueppel-like factor 5; 92.7 0.11 3.7E-06 36.0 3.7 56 40-97 11-73 (100)
43 2lt7_A Transcriptional regulat 92.6 0.058 2E-06 41.3 2.4 49 43-93 21-72 (133)
44 2em0_A Zinc finger protein 224 92.5 0.12 4E-06 31.1 3.3 34 44-79 12-46 (46)
45 1ubd_C Protein (YY1 zinc finge 92.5 0.094 3.2E-06 37.9 3.3 50 44-96 5-59 (124)
46 2eps_A POZ-, at HOOK-, and zin 92.3 0.097 3.3E-06 33.1 2.9 39 43-82 11-50 (54)
47 2eq0_A Zinc finger protein 347 92.2 0.098 3.4E-06 31.5 2.7 35 43-79 11-46 (46)
48 1a1h_A QGSR zinc finger peptid 92.1 0.093 3.2E-06 35.6 2.8 52 44-97 4-60 (90)
49 2eop_A Zinc finger protein 268 92.0 0.13 4.4E-06 30.8 3.1 34 44-79 12-46 (46)
50 2eov_A Zinc finger protein 484 92.0 0.11 3.8E-06 31.1 2.8 34 44-79 12-46 (46)
51 2ema_A Zinc finger protein 347 92.0 0.1 3.5E-06 31.4 2.6 34 44-79 12-46 (46)
52 2ghf_A ZHX1, zinc fingers and 91.9 0.083 2.9E-06 39.2 2.5 48 44-91 18-70 (102)
53 2eoe_A Zinc finger protein 347 91.8 0.11 3.8E-06 31.1 2.6 34 44-79 12-46 (46)
54 2ytk_A Zinc finger protein 347 91.7 0.1 3.5E-06 31.4 2.4 34 44-79 12-46 (46)
55 2eoq_A Zinc finger protein 224 91.7 0.14 4.8E-06 30.8 3.0 34 44-79 12-46 (46)
56 2ep2_A Zinc finger protein 484 91.7 0.12 4.2E-06 31.0 2.7 35 43-79 11-46 (46)
57 2ytj_A Zinc finger protein 484 91.5 0.13 4.3E-06 31.0 2.6 34 44-79 12-46 (46)
58 2ene_A Zinc finger protein 347 91.5 0.13 4.3E-06 31.0 2.6 34 44-79 12-46 (46)
59 1f2i_G Fusion of N-terminal 17 91.4 0.099 3.4E-06 34.4 2.2 49 43-93 18-71 (73)
60 2i13_A AART; DNA binding, zinc 91.4 0.088 3E-06 41.1 2.3 52 44-97 105-159 (190)
61 2epr_A POZ-, at HOOK-, and zin 91.3 0.13 4.4E-06 31.5 2.5 37 43-81 11-48 (48)
62 2wbs_A Krueppel-like factor 4; 91.2 0.19 6.4E-06 34.0 3.5 52 43-96 4-62 (89)
63 2epz_A Zinc finger protein 28 91.1 0.18 6.3E-06 30.2 3.1 34 44-79 12-46 (46)
64 2emk_A Zinc finger protein 28 91.1 0.15 5.2E-06 30.7 2.7 34 44-79 12-46 (46)
65 2gli_A Protein (five-finger GL 91.1 0.23 8E-06 37.0 4.3 53 44-96 3-64 (155)
66 2emy_A Zinc finger protein 268 91.1 0.13 4.4E-06 30.9 2.3 34 44-79 12-46 (46)
67 2ytq_A Zinc finger protein 268 91.0 0.18 6.2E-06 30.3 3.0 34 44-79 12-46 (46)
68 2el4_A Zinc finger protein 268 90.9 0.17 5.8E-06 30.3 2.8 34 44-79 12-46 (46)
69 2eq4_A Zinc finger protein 224 90.9 0.19 6.5E-06 30.1 3.0 34 44-79 12-46 (46)
70 2emf_A Zinc finger protein 484 90.9 0.18 6.1E-06 30.3 2.9 34 44-79 12-46 (46)
71 2ytr_A Zinc finger protein 347 90.8 0.2 6.9E-06 29.9 3.0 34 44-79 12-46 (46)
72 2emh_A Zinc finger protein 484 90.8 0.11 3.9E-06 31.2 1.9 34 44-79 12-46 (46)
73 2csh_A Zinc finger protein 297 90.8 0.14 4.9E-06 36.3 2.7 51 44-97 10-63 (110)
74 2i13_A AART; DNA binding, zinc 90.7 0.14 4.7E-06 39.9 2.8 50 44-95 49-101 (190)
75 2em9_A Zinc finger protein 224 90.7 0.18 6.2E-06 30.1 2.8 34 44-79 12-46 (46)
76 2enc_A Zinc finger protein 224 90.7 0.18 6E-06 30.3 2.7 34 44-79 12-46 (46)
77 2em5_A ZFP-95, zinc finger pro 90.5 0.18 6.2E-06 30.3 2.7 34 44-79 12-46 (46)
78 2epw_A Zinc finger protein 268 90.5 0.15 5.2E-06 30.5 2.3 34 44-79 12-46 (46)
79 2eme_A Zinc finger protein 473 90.4 0.2 6.8E-06 30.0 2.8 34 44-79 12-46 (46)
80 2ytg_A ZFP-95, zinc finger pro 90.4 0.16 5.5E-06 30.5 2.3 34 44-79 12-46 (46)
81 2j7j_A Transcription factor II 90.3 0.15 5.2E-06 33.9 2.4 50 45-96 2-58 (85)
82 2ely_A Zinc finger protein 224 90.3 0.17 5.7E-06 30.5 2.3 34 44-79 12-46 (46)
83 1ubd_C Protein (YY1 zinc finge 90.3 0.24 8.1E-06 35.7 3.6 53 43-97 33-90 (124)
84 2ytm_A Zinc finger protein 28 90.2 0.16 5.5E-06 30.7 2.2 34 44-79 12-46 (46)
85 2ysl_A Tripartite motif-contai 90.1 0.12 4.1E-06 34.9 1.7 48 39-86 15-70 (73)
86 2wbs_A Krueppel-like factor 4; 90.1 0.18 6.3E-06 34.0 2.7 49 43-93 34-87 (89)
87 1tf6_A Protein (transcription 90.1 0.21 7.1E-06 38.9 3.4 49 45-93 73-128 (190)
88 2ep0_A Zinc finger protein 28 90.1 0.21 7.1E-06 29.9 2.7 34 44-79 12-46 (46)
89 1t1h_A Gspef-atpub14, armadill 90.1 0.13 4.5E-06 35.2 1.9 48 37-85 1-55 (78)
90 2en6_A Zinc finger protein 268 90.1 0.14 4.7E-06 30.8 1.8 34 44-79 12-46 (46)
91 2j7j_A Transcription factor II 90.1 0.21 7E-06 33.2 2.9 48 43-95 30-85 (85)
92 2en8_A Zinc finger protein 224 89.8 0.23 7.9E-06 29.6 2.7 34 44-79 12-46 (46)
93 2ytd_A Zinc finger protein 473 89.8 0.19 6.6E-06 30.1 2.3 34 44-79 12-46 (46)
94 2elz_A Zinc finger protein 224 89.8 0.3 1E-05 29.3 3.2 34 44-79 12-46 (46)
95 2ysp_A Zinc finger protein 224 89.6 0.18 6.3E-06 30.2 2.1 34 44-79 12-46 (46)
96 2ep3_A Zinc finger protein 484 89.5 0.24 8.3E-06 29.6 2.6 34 44-79 12-46 (46)
97 2en1_A Zinc finger protein 224 89.4 0.21 7.2E-06 29.9 2.3 34 44-79 12-46 (46)
98 2em7_A Zinc finger protein 224 89.4 0.26 9E-06 29.5 2.7 34 44-79 12-46 (46)
99 2kr4_A Ubiquitin conjugation f 89.4 0.48 1.7E-05 33.7 4.5 40 39-85 9-60 (85)
100 2eoo_A ZFP-95, zinc finger pro 89.2 0.18 6.1E-06 30.4 1.9 34 44-79 12-46 (46)
101 2emm_A ZFP-95, zinc finger pro 89.2 0.23 7.7E-06 29.7 2.3 34 44-79 12-46 (46)
102 2el6_A Zinc finger protein 268 89.2 0.29 1E-05 29.3 2.8 34 44-79 12-46 (46)
103 2yu8_A Zinc finger protein 347 89.1 0.15 5.1E-06 30.6 1.4 34 44-79 12-46 (46)
104 2eml_A Zinc finger protein 28 88.9 0.32 1.1E-05 29.1 2.8 34 44-79 12-46 (46)
105 2ytt_A Zinc finger protein 473 88.9 0.21 7.1E-06 30.0 2.0 34 44-79 12-46 (46)
106 2epq_A POZ-, at HOOK-, and zin 88.3 0.25 8.6E-06 29.5 2.1 35 44-80 10-45 (45)
107 2dmi_A Teashirt homolog 3; zin 88.2 0.12 4.2E-06 36.9 0.6 54 41-96 47-105 (115)
108 2em2_A Zinc finger protein 28 87.9 0.31 1.1E-05 29.2 2.3 34 44-79 12-46 (46)
109 2emx_A Zinc finger protein 268 87.7 0.35 1.2E-05 28.6 2.4 34 44-79 10-44 (44)
110 2emp_A Zinc finger protein 347 87.7 0.28 9.7E-06 29.3 2.0 34 44-79 12-46 (46)
111 1wge_A Hypothetical protein 26 87.5 0.18 6.3E-06 37.0 1.2 46 30-84 15-63 (83)
112 2kre_A Ubiquitin conjugation f 87.3 0.72 2.5E-05 34.0 4.4 40 39-85 24-75 (100)
113 1vd4_A Transcription initiatio 87.2 0.26 9E-06 32.1 1.8 36 44-83 14-49 (62)
114 2ebt_A Krueppel-like factor 5; 87.0 0.72 2.4E-05 31.6 4.1 50 43-94 44-98 (100)
115 2lt7_A Transcriptional regulat 86.8 0.3 1E-05 37.3 2.1 52 44-97 50-104 (133)
116 2jp9_A Wilms tumor 1; DNA bind 86.8 0.42 1.4E-05 33.8 2.8 48 45-94 37-89 (119)
117 2yso_A ZFP-95, zinc finger pro 86.7 0.4 1.4E-05 28.6 2.3 34 44-79 12-46 (46)
118 2em8_A Zinc finger protein 224 86.6 0.36 1.2E-05 28.9 2.1 34 44-79 12-46 (46)
119 2jr7_A DPH3 homolog; DESR1, CS 86.6 0.18 6.3E-06 37.5 0.8 45 31-84 9-56 (89)
120 4ayb_P DNA-directed RNA polyme 86.4 0.33 1.1E-05 32.3 1.9 16 38-53 17-32 (48)
121 1wgm_A Ubiquitin conjugation f 85.9 1 3.4E-05 33.1 4.6 40 39-85 17-69 (98)
122 2jp9_A Wilms tumor 1; DNA bind 85.9 0.6 2.1E-05 33.0 3.3 51 44-96 6-63 (119)
123 2egp_A Tripartite motif-contai 85.5 0.33 1.1E-05 33.0 1.7 47 39-85 7-65 (79)
124 6rxn_A Rubredoxin; electron tr 85.5 0.31 1.1E-05 32.0 1.4 34 44-82 4-39 (46)
125 2csy_A Zinc finger protein 183 84.3 0.19 6.5E-06 34.8 -0.1 47 37-85 8-61 (81)
126 2ctu_A Zinc finger protein 483 84.3 0.037 1.3E-06 36.0 -3.6 43 43-93 17-61 (73)
127 3hcs_A TNF receptor-associated 84.0 0.51 1.7E-05 37.1 2.3 46 44-92 82-130 (170)
128 1tf6_A Protein (transcription 83.9 0.76 2.6E-05 35.6 3.3 52 43-96 103-161 (190)
129 2ecw_A Tripartite motif-contai 83.8 0.26 8.8E-06 33.7 0.5 47 39-85 14-71 (85)
130 2ect_A Ring finger protein 126 83.8 0.35 1.2E-05 33.0 1.2 48 38-85 9-64 (78)
131 1yop_A KTI11P; zinc finger, me 83.7 0.29 1E-05 35.9 0.7 46 30-84 8-56 (83)
132 1zw8_A Zinc-responsive transcr 83.6 1 3.4E-05 30.5 3.4 51 45-95 2-64 (64)
133 2rpc_A Zinc finger protein ZIC 83.5 0.74 2.5E-05 34.4 3.0 52 44-97 62-118 (155)
134 2f42_A STIP1 homology and U-bo 83.2 1.2 4.2E-05 36.6 4.4 42 38-85 100-153 (179)
135 2ecj_A Tripartite motif-contai 82.4 0.65 2.2E-05 29.6 2.0 18 39-56 10-27 (58)
136 2ecv_A Tripartite motif-contai 81.5 0.3 1E-05 33.4 0.0 47 39-85 14-71 (85)
137 2lv2_A Insulinoma-associated p 81.5 0.75 2.6E-05 32.8 2.2 29 44-72 56-85 (85)
138 3ztg_A E3 ubiquitin-protein li 81.2 0.22 7.4E-06 35.2 -0.8 46 38-83 7-60 (92)
139 1e4u_A Transcriptional repress 81.1 0.63 2.1E-05 32.9 1.6 44 41-85 8-62 (78)
140 2ep1_A Zinc finger protein 484 80.9 1.5 5.2E-05 25.8 3.2 33 44-78 12-45 (46)
141 2ea6_A Ring finger protein 4; 80.8 0.53 1.8E-05 30.9 1.1 46 39-84 10-67 (69)
142 2yti_A Zinc finger protein 347 80.5 1.4 4.9E-05 26.0 3.0 33 44-78 12-45 (46)
143 2enf_A Zinc finger protein 347 80.4 1.5 5E-05 26.0 3.0 33 44-78 12-45 (46)
144 2epa_A Krueppel-like factor 10 80.1 1.6 5.4E-05 28.3 3.3 51 40-92 13-70 (72)
145 1paa_A Yeast transcription fac 79.9 1.1 3.6E-05 23.6 2.0 26 44-69 2-28 (30)
146 3mjh_B Early endosome antigen 79.8 0.94 3.2E-05 28.0 1.9 27 44-70 5-32 (34)
147 2ysj_A Tripartite motif-contai 79.7 0.85 2.9E-05 29.8 1.9 18 39-56 15-32 (63)
148 2kiz_A E3 ubiquitin-protein li 79.6 0.19 6.4E-06 33.6 -1.5 48 38-85 8-63 (69)
149 1twf_L ABC10-alpha, DNA-direct 79.6 0.62 2.1E-05 33.0 1.2 31 41-83 25-55 (70)
150 2yts_A Zinc finger protein 484 79.5 1.5 5.2E-05 25.8 2.8 33 44-78 12-45 (46)
151 2emg_A Zinc finger protein 484 79.5 1.7 5.7E-05 25.7 3.1 33 44-78 12-45 (46)
152 2em3_A Zinc finger protein 28 79.4 1.2 4E-05 26.5 2.3 33 44-78 12-45 (46)
153 1klr_A Zinc finger Y-chromosom 79.0 1.1 3.9E-05 23.3 1.9 21 45-65 3-24 (30)
154 2eq2_A Zinc finger protein 347 78.9 1.9 6.6E-05 25.4 3.2 33 44-78 12-45 (46)
155 2k5c_A Uncharacterized protein 78.6 0.5 1.7E-05 35.1 0.4 13 43-55 50-62 (95)
156 2yth_A Zinc finger protein 224 77.5 2.2 7.6E-05 25.2 3.2 33 44-78 12-45 (46)
157 2lcq_A Putative toxin VAPC6; P 77.3 0.54 1.8E-05 37.2 0.3 30 41-83 129-158 (165)
158 2emi_A Zinc finger protein 484 77.0 1.9 6.5E-05 25.5 2.7 33 44-78 12-45 (46)
159 2ecy_A TNF receptor-associated 77.0 0.43 1.5E-05 31.7 -0.3 48 39-86 10-63 (66)
160 2eq1_A Zinc finger protein 347 76.3 2.3 8E-05 25.0 3.0 33 44-78 12-45 (46)
161 2ytf_A Zinc finger protein 268 76.2 2 6.7E-05 25.3 2.6 33 44-78 12-45 (46)
162 2yur_A Retinoblastoma-binding 76.2 0.61 2.1E-05 31.8 0.3 45 38-82 9-61 (74)
163 2ct2_A Tripartite motif protei 76.2 1.6 5.6E-05 29.9 2.6 48 39-86 10-69 (88)
164 2eon_A ZFP-95, zinc finger pro 75.9 2.3 7.8E-05 25.2 2.9 33 44-78 12-45 (46)
165 2en9_A Zinc finger protein 28 75.8 2.1 7.2E-05 25.3 2.7 33 44-78 12-45 (46)
166 2eow_A Zinc finger protein 347 75.5 1.8 6E-05 25.5 2.3 33 44-78 12-45 (46)
167 2ytp_A Zinc finger protein 484 75.4 2.1 7.1E-05 25.3 2.6 33 44-78 12-45 (46)
168 2emj_A Zinc finger protein 28 75.3 1.8 6.1E-05 25.7 2.3 33 44-78 12-45 (46)
169 2d8t_A Dactylidin, ring finger 75.3 1.5 5.2E-05 29.4 2.2 48 41-88 12-64 (71)
170 1wir_A Protein arginine N-meth 75.2 1.9 6.5E-05 33.5 2.9 32 42-73 13-45 (121)
171 2c2l_A CHIP, carboxy terminus 74.6 3 0.0001 34.3 4.2 41 39-85 203-255 (281)
172 2yrj_A Zinc finger protein 473 74.5 2.3 7.9E-05 25.0 2.6 33 44-78 12-45 (46)
173 1wii_A Hypothetical UPF0222 pr 74.4 1 3.4E-05 33.1 1.1 37 41-82 20-56 (85)
174 2elp_A Zinc finger protein 406 74.4 1 3.5E-05 25.3 0.9 22 44-65 9-32 (37)
175 1iym_A EL5; ring-H2 finger, ub 74.3 0.39 1.3E-05 30.5 -1.0 40 44-83 5-53 (55)
176 2ct1_A Transcriptional repress 74.0 1.7 5.8E-05 28.7 2.1 29 43-71 44-73 (77)
177 2eor_A Zinc finger protein 224 73.7 1.7 5.7E-05 25.6 1.8 33 44-78 12-45 (46)
178 2em6_A Zinc finger protein 224 73.5 3 0.0001 24.6 3.0 33 44-78 12-45 (46)
179 2el5_A Zinc finger protein 268 73.2 2.7 9.1E-05 24.2 2.7 32 44-77 10-42 (42)
180 2em4_A Zinc finger protein 28 72.9 2.3 7.7E-05 25.2 2.3 33 44-78 12-45 (46)
181 2adr_A ADR1; transcription reg 71.9 2.3 8E-05 26.4 2.3 28 44-71 30-58 (60)
182 3fl2_A E3 ubiquitin-protein li 71.9 0.39 1.3E-05 35.9 -1.7 45 40-85 48-99 (124)
183 2eoy_A Zinc finger protein 473 70.8 2.7 9.1E-05 24.8 2.3 34 44-78 12-46 (46)
184 2epu_A Zinc finger protein 32; 70.7 2.5 8.5E-05 24.9 2.1 33 44-78 12-45 (45)
185 3pwf_A Rubrerythrin; non heme 70.5 2.2 7.7E-05 34.5 2.4 27 42-82 136-162 (170)
186 2dlk_A Novel protein; ZF-C2H2 70.5 2.5 8.4E-05 27.7 2.3 37 44-82 38-77 (79)
187 2eom_A ZFP-95, zinc finger pro 69.8 3.5 0.00012 24.4 2.7 33 44-78 12-45 (46)
188 2yrm_A B-cell lymphoma 6 prote 69.7 3.7 0.00013 24.0 2.8 33 44-78 10-43 (43)
189 2eoz_A Zinc finger protein 473 69.6 2.3 7.8E-05 25.2 1.8 33 44-78 12-45 (46)
190 2eof_A Zinc finger protein 268 67.6 3.8 0.00013 23.6 2.5 32 44-77 12-44 (44)
191 2djb_A Polycomb group ring fin 67.6 0.56 1.9E-05 31.7 -1.5 45 39-85 10-62 (72)
192 2kdx_A HYPA, hydrogenase/ureas 67.5 1.7 5.9E-05 32.8 1.1 31 39-82 68-99 (119)
193 1lko_A Rubrerythrin all-iron(I 67.4 1.2 4.3E-05 36.4 0.3 28 42-82 153-180 (191)
194 2emz_A ZFP-95, zinc finger pro 67.4 2.6 8.9E-05 24.9 1.7 33 44-78 12-45 (46)
195 1e8j_A Rubredoxin; iron-sulfur 67.3 3 0.0001 27.7 2.1 13 40-52 32-44 (52)
196 2yuc_A TNF receptor-associated 67.3 2.5 8.5E-05 28.8 1.8 47 43-91 15-63 (76)
197 3htk_C E3 SUMO-protein ligase 67.2 1.9 6.4E-05 37.9 1.4 45 41-85 178-232 (267)
198 2en7_A Zinc finger protein 268 66.9 5 0.00017 23.1 2.9 32 44-77 12-44 (44)
199 2eoh_A Zinc finger protein 28 66.8 4.9 0.00017 23.6 2.9 32 44-77 12-44 (46)
200 1x4j_A Ring finger protein 38; 66.7 0.68 2.3E-05 31.4 -1.2 44 41-84 20-71 (75)
201 2y43_A E3 ubiquitin-protein li 66.5 0.68 2.3E-05 33.1 -1.3 44 40-85 18-69 (99)
202 1ard_A Yeast transcription fac 65.8 3.4 0.00012 21.2 1.9 21 45-65 3-24 (29)
203 2ent_A Krueppel-like factor 15 65.6 4.8 0.00016 23.6 2.7 34 44-79 12-48 (48)
204 2djr_A Zinc finger BED domain- 65.6 1.5 5.1E-05 31.5 0.4 13 43-55 27-39 (76)
205 2m0f_A Zinc finger and BTB dom 65.6 2.8 9.6E-05 21.5 1.4 21 44-64 2-23 (29)
206 3sp4_A Aprataxin-like protein; 65.4 2.2 7.6E-05 35.9 1.4 25 42-66 167-193 (204)
207 2lvu_A Zinc finger and BTB dom 68.8 1.3 4.5E-05 22.7 0.0 19 45-63 3-22 (26)
208 2eq3_A Zinc finger protein 347 64.8 4.3 0.00015 23.7 2.3 32 44-77 12-44 (46)
209 2enh_A Zinc finger protein 28 64.5 5.7 0.0002 23.3 2.9 32 44-77 12-44 (46)
210 2els_A Zinc finger protein 406 64.4 2.9 0.0001 23.1 1.4 23 43-65 8-31 (36)
211 2ct5_A Zinc finger BED domain 64.3 2.1 7.2E-05 30.4 0.9 17 84-100 45-61 (73)
212 1bor_A Transcription factor PM 63.8 2.8 9.5E-05 27.1 1.4 43 42-84 4-48 (56)
213 2m0e_A Zinc finger and BTB dom 63.8 4.5 0.00015 20.5 2.1 19 45-63 3-22 (29)
214 1x6h_A Transcriptional repress 63.3 4.9 0.00017 26.4 2.7 38 43-82 46-84 (86)
215 1z6u_A NP95-like ring finger p 63.3 0.77 2.6E-05 36.1 -1.7 45 41-86 75-126 (150)
216 2xeu_A Ring finger protein 4; 63.2 0.72 2.4E-05 29.8 -1.6 43 44-86 3-57 (64)
217 2elu_A Zinc finger protein 406 63.2 3.6 0.00012 25.5 1.7 25 45-69 10-35 (37)
218 3l11_A E3 ubiquitin-protein li 63.0 3 0.0001 30.5 1.6 44 41-85 12-62 (115)
219 2e72_A POGO transposable eleme 62.9 3.7 0.00013 27.3 1.9 22 43-64 11-33 (49)
220 1v87_A Deltex protein 2; ring- 62.4 0.73 2.5E-05 33.7 -1.9 13 44-56 25-37 (114)
221 2i5o_A DNA polymerase ETA; zin 62.1 2.9 0.0001 26.4 1.2 23 42-64 7-29 (39)
222 2d9h_A Zinc finger protein 692 62.1 4.7 0.00016 26.4 2.3 30 43-72 37-67 (78)
223 2kvh_A Zinc finger and BTB dom 62.0 3.6 0.00012 21.1 1.4 21 44-64 3-24 (27)
224 2l0b_A E3 ubiquitin-protein li 61.5 0.77 2.6E-05 32.7 -1.8 44 41-84 37-88 (91)
225 2ea5_A Cell growth regulator w 61.3 1.5 5.2E-05 29.9 -0.3 43 42-85 13-58 (68)
226 2ep4_A Ring finger protein 24; 61.0 1.1 3.7E-05 30.1 -1.1 45 40-84 11-63 (74)
227 2yte_A Zinc finger protein 473 60.9 7.8 0.00027 22.0 3.0 25 44-69 10-35 (42)
228 2yto_A Zinc finger protein 484 60.7 5 0.00017 23.6 2.1 32 44-77 12-44 (46)
229 1p7a_A BF3, BKLF, kruppel-like 60.7 5.9 0.0002 21.8 2.3 22 44-65 11-33 (37)
230 1znf_A 31ST zinc finger from X 60.5 6.2 0.00021 19.9 2.3 20 45-64 2-22 (27)
231 2m0d_A Zinc finger and BTB dom 60.3 4.4 0.00015 20.7 1.6 22 44-65 3-25 (30)
232 3ng2_A RNF4, snurf, ring finge 60.1 1.1 3.6E-05 29.7 -1.2 44 43-86 9-64 (71)
233 3iuf_A Zinc finger protein UBI 59.9 4.6 0.00016 24.5 1.9 28 45-72 8-36 (48)
234 2elm_A Zinc finger protein 406 59.9 4.5 0.00015 22.8 1.7 25 44-68 9-34 (37)
235 2yuc_A TNF receptor-associated 59.6 5.6 0.00019 27.0 2.4 23 42-64 42-64 (76)
236 1vq8_Z 50S ribosomal protein L 59.5 1.9 6.6E-05 31.4 0.0 31 40-83 23-55 (83)
237 2drp_A Protein (tramtrack DNA- 59.3 3.8 0.00013 25.9 1.5 26 43-68 39-65 (66)
238 1jm7_A BRCA1, breast cancer ty 59.1 0.99 3.4E-05 32.6 -1.6 45 41-85 18-70 (112)
239 1ffk_W Ribosomal protein L37AE 58.6 2 6.8E-05 30.7 -0.1 15 38-52 21-35 (73)
240 2jvx_A NF-kappa-B essential mo 58.0 5.4 0.00019 23.5 1.8 23 43-65 2-25 (28)
241 1yuz_A Nigerythrin; rubrythrin 58.0 3.4 0.00012 34.2 1.3 27 42-82 169-195 (202)
242 2l7x_A Envelope glycoprotein; 57.9 3.5 0.00012 29.6 1.1 29 73-105 30-59 (77)
243 3lrq_A E3 ubiquitin-protein li 57.9 0.93 3.2E-05 32.8 -2.0 45 40-85 18-70 (100)
244 1rik_A E6APC1 peptide; E6-bind 57.8 4.5 0.00015 20.8 1.4 21 45-65 3-24 (29)
245 3flo_B DNA polymerase alpha ca 57.5 1.9 6.6E-05 36.2 -0.3 42 41-85 19-61 (206)
246 2kvf_A Zinc finger and BTB dom 57.3 3.8 0.00013 21.1 1.0 19 45-63 4-23 (28)
247 2eoj_A Zinc finger protein 268 57.3 7 0.00024 22.5 2.3 32 44-77 12-44 (44)
248 2elt_A Zinc finger protein 406 57.0 4.7 0.00016 22.0 1.4 22 44-65 9-31 (36)
249 2elx_A Zinc finger protein 406 57.0 5.3 0.00018 21.6 1.6 22 44-65 7-29 (35)
250 2l7x_A Envelope glycoprotein; 56.8 3.5 0.00012 29.6 1.0 24 41-64 27-50 (77)
251 2emb_A Zinc finger protein 473 56.7 8.6 0.00029 22.2 2.7 31 44-76 12-43 (44)
252 2elq_A Zinc finger protein 406 56.3 4.8 0.00017 22.1 1.4 22 44-65 9-31 (36)
253 3jyw_9 60S ribosomal protein L 55.4 1.7 5.7E-05 31.1 -0.9 15 39-53 21-35 (72)
254 2yu5_A Zinc finger protein 473 55.4 7.2 0.00025 22.5 2.1 24 44-68 12-36 (44)
255 1rim_A E6APC2 peptide; E6-bind 55.2 6.4 0.00022 21.6 1.8 20 45-64 3-23 (33)
256 2ckl_B Ubiquitin ligase protei 54.5 0.84 2.9E-05 35.7 -2.9 45 40-84 50-101 (165)
257 3j21_i 50S ribosomal protein L 54.5 1.8 6.2E-05 31.8 -0.9 16 38-53 29-44 (83)
258 2ckl_A Polycomb group ring fin 54.4 2.1 7.1E-05 31.1 -0.6 44 40-85 11-62 (108)
259 2elr_A Zinc finger protein 406 54.3 6.9 0.00024 21.3 1.9 23 43-65 8-31 (36)
260 2kvg_A Zinc finger and BTB dom 54.2 4.2 0.00015 21.0 0.9 21 44-64 3-24 (27)
261 1srk_A Zinc finger protein ZFP 54.2 7 0.00024 21.2 1.9 22 44-65 7-29 (35)
262 2elo_A Zinc finger protein 406 54.2 5 0.00017 22.2 1.2 22 44-65 9-31 (37)
263 1yk4_A Rubredoxin, RD; electro 54.0 4.9 0.00017 26.7 1.3 13 40-52 31-43 (52)
264 2kn9_A Rubredoxin; metalloprot 53.9 4.4 0.00015 29.5 1.2 7 44-50 27-33 (81)
265 1x5w_A Zinc finger protein 64, 53.4 6.5 0.00022 25.2 1.9 26 44-69 37-63 (70)
266 2eou_A Zinc finger protein 473 53.0 10 0.00035 21.9 2.6 24 44-68 12-36 (44)
267 1g25_A CDK-activating kinase a 52.8 2.2 7.6E-05 27.9 -0.6 42 44-86 3-56 (65)
268 2lvr_A Zinc finger and BTB dom 57.6 3 0.0001 21.6 0.0 21 44-64 3-24 (30)
269 3mkr_B Coatomer subunit alpha; 52.2 3 0.0001 37.4 0.0 34 43-89 277-311 (320)
270 1dx8_A Rubredoxin; electron tr 51.6 6.3 0.00021 27.7 1.6 14 39-52 35-48 (70)
271 3a43_A HYPD, hydrogenase nicke 51.2 3.7 0.00013 32.1 0.4 19 40-58 66-84 (139)
272 3mv2_A Coatomer subunit alpha; 51.1 3.3 0.00011 37.2 0.1 34 42-88 285-319 (325)
273 2l6l_A DNAJ homolog subfamily 50.9 1.5 5.2E-05 34.3 -1.9 50 31-90 98-150 (155)
274 2elv_A Zinc finger protein 406 50.8 6.8 0.00023 21.5 1.4 22 44-65 9-31 (36)
275 2ept_A Zinc finger protein 32; 50.3 12 0.00043 21.0 2.6 24 44-68 10-34 (41)
276 4rxn_A Rubredoxin; electron tr 50.3 6.7 0.00023 26.3 1.5 13 40-52 32-44 (54)
277 2kfq_A FP1; protein, de novo p 50.3 7.5 0.00026 21.0 1.5 23 45-68 3-26 (32)
278 2en3_A ZFP-95, zinc finger pro 50.2 5.2 0.00018 23.4 0.9 22 44-65 12-34 (46)
279 1jm7_B BARD1, BRCA1-associated 49.9 2.2 7.5E-05 31.5 -1.1 45 41-85 19-67 (117)
280 3hct_A TNF receptor-associated 49.4 18 0.00063 26.4 4.0 47 39-86 13-66 (118)
281 3iz5_m 60S ribosomal protein L 49.1 4.7 0.00016 30.1 0.6 15 39-53 31-45 (92)
282 2lo3_A SAGA-associated factor 48.9 6.5 0.00022 25.5 1.2 27 43-70 16-42 (44)
283 3izc_m 60S ribosomal protein R 48.9 4.5 0.00015 30.2 0.5 15 39-53 31-45 (92)
284 2lvt_A Zinc finger and BTB dom 54.1 3.7 0.00013 21.3 0.0 20 45-64 3-23 (29)
285 2ytb_A Zinc finger protein 32; 48.2 11 0.00037 21.3 2.1 25 44-69 11-36 (42)
286 2czr_A TBP-interacting protein 48.1 5.4 0.00018 33.7 0.9 25 41-65 151-175 (226)
287 1s24_A Rubredoxin 2; electron 48.0 6.3 0.00022 29.0 1.2 13 40-52 64-76 (87)
288 2akl_A PHNA-like protein PA012 47.7 5.3 0.00018 31.8 0.8 27 44-82 27-53 (138)
289 1wim_A KIAA0161 protein; ring 47.4 5 0.00017 28.4 0.5 50 43-92 4-73 (94)
290 2ghf_A ZHX1, zinc fingers and 46.8 6.5 0.00022 28.7 1.1 37 44-81 50-87 (102)
291 3o9x_A Uncharacterized HTH-typ 46.2 2.1 7.2E-05 31.9 -1.7 39 46-84 4-47 (133)
292 4ic3_A E3 ubiquitin-protein li 46.2 2.8 9.4E-05 28.7 -1.0 45 40-85 20-67 (74)
293 2epc_A Zinc finger protein 32; 46.1 14 0.00048 20.8 2.4 22 44-65 11-33 (42)
294 1rmd_A RAG1; V(D)J recombinati 45.8 3.1 0.00011 30.4 -0.8 47 39-86 18-71 (116)
295 1l8d_A DNA double-strand break 45.4 7.9 0.00027 28.4 1.4 12 45-56 48-59 (112)
296 2jne_A Hypothetical protein YF 45.2 2.9 0.0001 31.7 -1.0 39 45-83 33-71 (101)
297 1njq_A Superman protein; zinc- 43.9 10 0.00034 21.3 1.4 24 44-68 6-30 (39)
298 2en2_A B-cell lymphoma 6 prote 43.7 9.8 0.00033 21.6 1.4 24 44-68 11-35 (42)
299 1dl6_A Transcription factor II 43.6 5.6 0.00019 26.7 0.3 39 41-90 8-47 (58)
300 2qgp_A HNH endonuclease; Q39X4 43.4 2.8 9.6E-05 31.5 -1.4 43 42-84 33-81 (112)
301 2eos_A B-cell lymphoma 6 prote 43.3 12 0.00042 21.2 1.8 25 44-69 11-36 (42)
302 1pft_A TFIIB, PFTFIIBN; N-term 42.9 4.5 0.00016 25.8 -0.3 34 44-88 5-39 (50)
303 4a17_Y RPL37A, 60S ribosomal p 42.8 5.8 0.0002 30.2 0.3 15 39-53 31-45 (103)
304 2vje_B MDM4 protein; proto-onc 41.9 2.5 8.7E-05 28.1 -1.7 41 42-84 5-55 (63)
305 2v3b_B Rubredoxin 2, rubredoxi 41.5 9.5 0.00033 25.5 1.2 14 39-52 31-44 (55)
306 4ayc_A E3 ubiquitin-protein li 40.4 3 0.0001 31.8 -1.7 44 41-84 50-98 (138)
307 2epv_A Zinc finger protein 268 40.2 21 0.00072 20.5 2.5 22 44-65 12-34 (44)
308 2gqj_A Zinc finger protein KIA 40.0 12 0.00042 25.8 1.7 26 43-68 53-79 (98)
309 2ecn_A Ring finger protein 141 39.8 2.6 9E-05 27.8 -1.9 43 40-84 11-59 (70)
310 2ecm_A Ring finger and CHY zin 39.6 2.8 9.7E-05 26.2 -1.6 41 44-84 5-54 (55)
311 2jr6_A UPF0434 protein NMA0874 39.6 8.8 0.0003 26.7 0.8 33 38-81 2-34 (68)
312 4ap4_A E3 ubiquitin ligase RNF 39.2 10 0.00035 27.4 1.2 36 45-85 49-84 (133)
313 3cc2_Z 50S ribosomal protein L 38.6 7.2 0.00025 30.2 0.3 34 39-84 55-89 (116)
314 2ecl_A Ring-box protein 2; RNF 38.6 3 0.0001 29.0 -1.8 13 72-84 63-75 (81)
315 2js4_A UPF0434 protein BB2007; 38.1 9.4 0.00032 26.8 0.8 33 38-81 2-34 (70)
316 1yui_A GAGA-factor; complex (D 37.6 14 0.00047 22.5 1.4 22 44-65 24-46 (54)
317 2epp_A POZ-, at HOOK-, and zin 37.4 24 0.00081 23.8 2.7 25 44-69 13-38 (66)
318 2jvm_A Uncharacterized protein 37.3 10 0.00036 27.5 0.9 14 43-56 52-65 (80)
319 2a25_A Ubiquitin ligase SIAH1; 37.2 12 0.00042 30.4 1.5 51 44-97 6-65 (193)
320 2ecg_A Baculoviral IAP repeat- 36.2 3.4 0.00012 28.1 -1.8 45 40-85 21-68 (75)
321 2hf1_A Tetraacyldisaccharide-1 35.5 8.9 0.0003 26.7 0.3 32 39-81 3-34 (68)
322 3dpl_R Ring-box protein 1; ubi 35.3 4.3 0.00015 30.2 -1.5 37 46-82 39-98 (106)
323 2pk7_A Uncharacterized protein 35.1 10 0.00035 26.5 0.5 33 38-81 2-34 (69)
324 4a0k_B E3 ubiquitin-protein li 34.9 8.1 0.00028 29.4 0.0 37 46-82 50-109 (117)
325 3pih_A Uvrabc system protein A 34.9 13 0.00045 37.4 1.5 36 41-81 246-281 (916)
326 3knv_A TNF receptor-associated 34.7 7.8 0.00027 29.9 -0.1 44 39-83 26-76 (141)
327 2jrr_A Uncharacterized protein 34.2 9.9 0.00034 26.7 0.4 12 43-54 39-50 (67)
328 2jrp_A Putative cytoplasmic pr 33.8 5.6 0.00019 29.0 -1.0 13 72-84 30-42 (81)
329 1sp2_A SP1F2; zinc finger, tra 33.3 32 0.0011 17.8 2.4 21 45-65 3-26 (31)
330 3h0g_L DNA-directed RNA polyme 33.1 17 0.00058 25.1 1.4 30 42-83 19-48 (63)
331 2gmg_A Hypothetical protein PF 32.6 23 0.00079 26.9 2.2 28 43-82 66-93 (105)
332 1chc_A Equine herpes virus-1 r 32.2 6.4 0.00022 25.6 -0.9 41 44-84 5-51 (68)
333 2eox_A Zinc finger protein 473 31.7 11 0.00039 21.6 0.3 24 44-68 12-36 (44)
334 3i1m_R 30S ribosomal protein S 31.6 12 0.0004 26.8 0.4 31 69-99 4-40 (75)
335 2d8s_A Cellular modulator of i 31.5 13 0.00043 26.2 0.5 11 73-83 58-68 (80)
336 3mwm_A ZUR, putative metal upt 30.3 17 0.00058 27.7 1.1 43 42-84 85-138 (139)
337 2jny_A Uncharacterized BCR; st 30.0 16 0.00055 25.4 0.9 32 38-80 4-35 (67)
338 3t6p_A Baculoviral IAP repeat- 30.0 7.5 0.00026 34.7 -1.1 44 41-85 292-338 (345)
339 3eyy_A Putative iron uptake re 29.6 15 0.00051 28.2 0.7 41 42-82 88-139 (145)
340 1e7l_A GP49, recombination end 28.3 7.6 0.00026 31.5 -1.2 43 43-85 19-67 (157)
341 1fv5_A First zinc finger of U- 27.5 22 0.00077 21.0 1.1 21 43-63 7-28 (36)
342 1zfd_A SWI5; DNA binding motif 27.5 43 0.0015 17.3 2.3 22 44-65 3-27 (32)
343 4dvc_A Thiol:disulfide interch 27.2 7.6 0.00026 29.3 -1.4 10 43-52 29-38 (184)
344 2yho_A E3 ubiquitin-protein li 26.9 4.2 0.00015 28.3 -2.6 44 41-85 15-61 (79)
345 4ets_A Ferric uptake regulatio 26.9 20 0.00068 28.1 1.0 41 42-82 105-156 (162)
346 2vje_A E3 ubiquitin-protein li 26.5 6.2 0.00021 26.2 -1.8 39 44-84 8-56 (64)
347 2eln_A Zinc finger protein 406 25.6 29 0.00098 20.6 1.4 22 44-65 9-33 (38)
348 2b9d_A E7 protein; zinc finger 25.5 46 0.0016 22.0 2.5 33 45-82 9-50 (52)
349 2yre_A F-box only protein 30; 25.0 45 0.0015 25.0 2.6 46 44-92 37-88 (100)
350 2r6f_A Excinuclease ABC subuni 24.9 22 0.00075 36.2 1.1 36 41-81 264-299 (972)
351 3mhs_C SAGA-associated factor 24.6 29 0.001 26.1 1.5 26 40-65 66-91 (99)
352 1va1_A Transcription factor SP 24.0 34 0.0011 18.8 1.4 21 44-64 8-31 (37)
353 3fz5_A Possible 2-hydroxychrom 23.3 7.3 0.00025 31.0 -2.3 13 40-52 8-20 (202)
354 2kpi_A Uncharacterized protein 23.1 25 0.00084 23.4 0.8 19 38-56 4-22 (56)
355 2imf_A HCCA isomerase, 2-hydro 22.8 7.5 0.00026 30.7 -2.3 22 41-62 5-27 (203)
356 2jz8_A Uncharacterized protein 22.7 26 0.00089 25.8 0.9 15 43-57 47-61 (87)
357 3k7a_M Transcription initiatio 22.6 28 0.00094 30.6 1.2 42 40-90 17-59 (345)
358 2yu4_A E3 SUMO-protein ligase 22.4 43 0.0015 23.5 2.0 34 50-84 26-62 (94)
359 2znm_A Thiol:disulfide interch 22.4 39 0.0013 25.8 1.9 18 43-60 30-48 (195)
360 2xig_A Ferric uptake regulatio 22.4 20 0.0007 27.5 0.3 41 42-82 97-148 (150)
361 3noy_A 4-hydroxy-3-methylbut-2 22.3 47 0.0016 30.3 2.7 23 43-65 270-293 (366)
362 2gag_D Heterotetrameric sarcos 22.2 17 0.00059 27.3 -0.2 8 45-52 4-11 (99)
363 1r4w_A Glutathione S-transfera 21.8 8.2 0.00028 31.1 -2.3 14 40-53 9-22 (226)
364 2ab3_A ZNF29; zinc finger prot 21.6 32 0.0011 17.1 0.9 20 45-64 3-25 (29)
365 1wir_A Protein arginine N-meth 21.0 41 0.0014 25.9 1.7 31 69-99 11-43 (121)
366 2fiy_A Protein FDHE homolog; F 20.8 16 0.00054 32.3 -0.7 11 72-82 221-231 (309)
367 1x3c_A Zinc finger protein 292 20.8 56 0.0019 23.2 2.3 27 44-70 27-56 (73)
368 3bci_A Disulfide bond protein 20.4 10 0.00036 29.2 -1.8 13 41-53 17-29 (186)
369 2k9h_A Glycoprotein; hantaviru 20.2 48 0.0016 22.5 1.7 21 43-63 27-49 (57)
370 3rpp_A Glutathione S-transfera 20.2 9.4 0.00032 31.4 -2.3 15 40-54 9-23 (234)
No 1
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.26 E-value=0.00019 Score=48.91 Aligned_cols=54 Identities=20% Similarity=0.452 Sum_probs=44.8
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhhhhcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHAS 97 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~qh~~ 97 (210)
.|.|++|+..| ....|..|+...|.-+.+.-.|++|.... ..++..|+...|+.
T Consensus 15 ~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~ 71 (77)
T 2ct1_A 15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71 (77)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred CeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence 49999999955 56889999987888777888999999874 44899999988864
No 2
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=97.22 E-value=0.00024 Score=46.75 Aligned_cols=54 Identities=20% Similarity=0.483 Sum_probs=44.5
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~ 96 (210)
..|.|+.|+..| ....|..|+...|....+.-.|++|..... .++..|+...|+
T Consensus 9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 459999999966 467899999887866677889999998754 489999998886
No 3
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=96.55 E-value=0.0017 Score=41.22 Aligned_cols=51 Identities=20% Similarity=0.311 Sum_probs=38.5
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhhhhc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~qh~ 96 (210)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+...|+
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRT-HTG-EKPYKCEFCEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHH-HHC-CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred CccCCCCcchhCChHHHHHHHHH-cCC-CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence 58999999955 56789999876 543 3557899999874 4589999988774
No 4
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.42 E-value=0.0027 Score=44.11 Aligned_cols=50 Identities=18% Similarity=0.355 Sum_probs=22.5
Q ss_pred ccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhc
Q 028361 45 FPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 45 f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~ 96 (210)
|.|++|+..| ....|..|+.. |.. .+.-.|++|..... .++..|+...|+
T Consensus 8 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 60 (95)
T 2yt9_A 8 VACEICGKIFRDVYHLNRHKLS-HSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDG 60 (95)
T ss_dssp EECSSSCCEESSSHHHHHHHHH-SCS-SCSEECSSSCCEESCHHHHHHHHHHHCC
T ss_pred eECCCCCCccCChHHHHHHHHh-cCC-CCCCcCCCCCCccCCHHHHHHHHHHhcC
Confidence 5555555533 23445555543 222 23345555554422 245555554443
No 5
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.40 E-value=0.0028 Score=42.18 Aligned_cols=53 Identities=17% Similarity=0.319 Sum_probs=41.3
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhcc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHAS 97 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~~ 97 (210)
..|.|+.|+..| ....|..|+.. |.. .+.-.|++|..... .++..|+...|+.
T Consensus 8 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 8 HPEKCSECSYSCSSKAALRIHERI-HCT-DRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63 (70)
T ss_dssp CSEECSSSSCEESSHHHHHHHHGG-GCC-SCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred CCeECCCCCcccCCHHHHHHHHHH-cCC-CCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence 459999999955 46779999876 654 35679999999754 4899999887764
No 6
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.28 E-value=0.0032 Score=45.75 Aligned_cols=50 Identities=20% Similarity=0.397 Sum_probs=40.2
Q ss_pred cccCCCCCcch--hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhc
Q 028361 44 CFPCPFCYLEI--EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 44 ~f~CP~C~e~~--d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~ 96 (210)
.|.|+.|+..| ....|..|+.. | ..+.-.|++|..... .++..|++.-|.
T Consensus 34 ~~~C~~C~k~F~~~~~~L~~H~~~-h--~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~ 87 (96)
T 2ctd_A 34 SVSCPTCQAVGRKTIEGLKKHMEN-C--KQEMFTCHHCGKQLRSLAGMKYHVMANHN 87 (96)
T ss_dssp CEECTTTCSCEESSHHHHHHHHHH-H--CCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred CcCCCCCCCCcccCHHHHHHHHHH-H--CCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence 59999999988 78899999865 6 567789999998754 488999554454
No 7
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.22 E-value=0.0011 Score=47.61 Aligned_cols=54 Identities=17% Similarity=0.268 Sum_probs=41.8
Q ss_pred ccccCCCCCcch--hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhcc
Q 028361 43 ACFPCPFCYLEI--EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHAS 97 (210)
Q Consensus 43 ~~f~CP~C~e~~--d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~~ 97 (210)
..|.|++|+..| ....|..|+.. |....+.-.|++|..... .++..|+...|+.
T Consensus 23 ~~~~C~~C~k~f~~~~~~L~~H~~~-h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 23 GEAVCPTCNVVTRKTLVGLKKHMEV-CQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp SCCCCTTTCCCCSSCSHHHHHHHHH-HHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred CCcCCCCCCCChhhhHHHHHHHHHH-HcCCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence 359999999977 57889999866 443345679999998754 4899999877754
No 8
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.14 E-value=0.0039 Score=42.36 Aligned_cols=54 Identities=17% Similarity=0.324 Sum_probs=41.3
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCC--cccccCcccccch--hhhHHhhHhhhhcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFE--MKNAVCPLCAANL--GKDAAEHFMVQHAS 97 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e--~~~~vCPvC~~~v--~~d~i~Hi~~qh~~ 97 (210)
.|.|++|+..| ....|..|+...|... .+.-.|++|.... ..++..|+...|+.
T Consensus 15 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 73 (86)
T 1x6h_A 15 PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73 (86)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCC
Confidence 49999999855 5667899998766554 2668999999874 34899999876654
No 9
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.06 E-value=0.0049 Score=41.27 Aligned_cols=52 Identities=15% Similarity=0.294 Sum_probs=39.4
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~ 96 (210)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|..... .++..|+.+.++
T Consensus 13 k~~~C~~C~k~f~~~~~L~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 67 (72)
T 1x6e_A 13 KPYGCVECGKAFSRSSILVQHQRV-HTG-EKPYKCLECGKAFSQNSGLINHQRIHTS 67 (72)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHG-GGC-SCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred CCccCCCCCCccCCHHHHHHHHHh-cCC-CCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 359999999965 56778999875 543 45679999998754 489999986554
No 10
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=96.01 E-value=0.0054 Score=38.77 Aligned_cols=50 Identities=16% Similarity=0.430 Sum_probs=38.1
Q ss_pred ccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhc
Q 028361 45 FPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 45 f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~ 96 (210)
|.|+.|+..| ....|..|+.. |.. .+.-.|++|..... .++..|+...|+
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRT-HTD-VRPYHCTYCNFSFKTKGNLTKHMKSKAH 54 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH-TSS-CCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred CcCCCCcCcCCCHHHHHHHHHh-cCC-CCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence 7899999965 56779999876 543 45678999998744 488999876554
No 11
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.92 E-value=0.004 Score=41.20 Aligned_cols=48 Identities=25% Similarity=0.461 Sum_probs=38.5
Q ss_pred ccccCCCCCcchhHHHhHhhhhhccCCCcccccCc-ccccch--hhhHHhhHhh
Q 028361 43 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCP-LCAANL--GKDAAEHFMV 93 (210)
Q Consensus 43 ~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCP-vC~~~v--~~d~i~Hi~~ 93 (210)
-.|+|++|+..|....|..|+.. ...+...|+ +|.... ..++..|+..
T Consensus 9 ~~~~C~~C~k~f~~~~L~~H~~~---~~~~p~~C~~~C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 9 RTQPCTYCTKEFVFDTIQSHQYQ---CPRLPVACPNQCGVGTVAREDLPGHLKD 59 (66)
T ss_dssp CEEECSSSCCEEEHHHHHHHHHH---CSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred CCeeccccCCccCHHHHHHHHHH---cCCcCccCCcccCcccccHHHHHHHHHh
Confidence 46999999998888889999875 445778999 999863 3488888864
No 12
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=95.81 E-value=0.0078 Score=38.48 Aligned_cols=51 Identities=22% Similarity=0.370 Sum_probs=38.5
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~ 96 (210)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|..... .++..|++..|.
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~ 55 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRS-HTN-EKPYPCGLCNRAFTRRDLLIRHAQKIHS 55 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHT-TTS-SCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred cCcCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence 48999999966 56789999876 644 35678999999754 488899865554
No 13
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=95.56 E-value=0.015 Score=44.03 Aligned_cols=57 Identities=18% Similarity=0.279 Sum_probs=43.8
Q ss_pred cccccccCCCCCcch-hHHHhHhhhhhccCCCccc-------ccCcccccchh--hhHHhhHhhhhc
Q 028361 40 DVKACFPCPFCYLEI-EAHMICSHLQEEHCFEMKN-------AVCPLCAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 40 d~~~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~-------~vCPvC~~~v~--~d~i~Hi~~qh~ 96 (210)
+....|+|+.|+..| ....|..|+...|..+... -.|++|..... .++..|+...++
T Consensus 21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 87 (155)
T 2rpc_A 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (155)
T ss_dssp TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC
T ss_pred hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC
Confidence 455689999999966 5778999998888876432 47999998753 488999986554
No 14
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=95.54 E-value=0.01 Score=43.75 Aligned_cols=51 Identities=24% Similarity=0.618 Sum_probs=39.5
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhcc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHAS 97 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~~ 97 (210)
..|.|++|+..| ....|..|+.. | .++-.|++|..... .++..|+...||.
T Consensus 73 ~~~~C~~C~k~f~~~~~l~~H~~~-H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 73 SQFVCPLCLMPFSSSVSLKQHIRY-T---EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp CSEECTTTCCEESSHHHHHHHHHH-T---CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred CCeECCCCCcccCCHhHHHHHHHH-C---CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence 359999999965 45678899865 5 45569999998753 4899999988875
No 15
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.51 E-value=0.0033 Score=43.78 Aligned_cols=48 Identities=27% Similarity=0.445 Sum_probs=39.6
Q ss_pred ccccCCCCCcchhHHHhHhhhhhccCCCcccccCcccccchh-hhHHhhHhh
Q 028361 43 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLG-KDAAEHFMV 93 (210)
Q Consensus 43 ~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~-~d~i~Hi~~ 93 (210)
-.+.|+||+..|-...|-.|. .|+- .++..||.|...+. .+|..|+..
T Consensus 16 r~~~C~~C~~~~~~~~L~~H~--~~c~-~~~~~C~~C~~~~~~~~l~~H~~~ 64 (75)
T 2d9k_A 16 RLAVCQHCDLELSILKLKEHE--DYCG-ARTELCGNCGRNVLVKDLKTHPEV 64 (75)
T ss_dssp CCEECSSSCCEECHHHHHHHH--HHHH-HCEEECSSSCCEEETTGGGTHHHH
T ss_pred cccCCcccChHhhHHHHHHHH--hHcC-CCceEcccCCCcCcHHHHHHHHHH
Confidence 469999999999999999997 4654 57789999998754 488888874
No 16
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.48 E-value=0.021 Score=39.60 Aligned_cols=56 Identities=18% Similarity=0.268 Sum_probs=41.5
Q ss_pred ccccccCCCCCcch-hHHHhHhhhhhccCCCccc-------ccCcccccchh--hhHHhhHhhhhc
Q 028361 41 VKACFPCPFCYLEI-EAHMICSHLQEEHCFEMKN-------AVCPLCAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 41 ~~~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~-------~vCPvC~~~v~--~d~i~Hi~~qh~ 96 (210)
....|+|+.|+..| ....|..|+...|.-+... -.|++|..... .++..|+.+.++
T Consensus 22 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~ 87 (95)
T 2ej4_A 22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (95)
T ss_dssp SCSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHT
T ss_pred CcCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCC
Confidence 34568899999966 5678999987767765321 68999998754 489999986544
No 17
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.43 E-value=0.012 Score=39.71 Aligned_cols=52 Identities=17% Similarity=0.291 Sum_probs=39.5
Q ss_pred ccccCCCCCcchh-HHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhhhhc
Q 028361 43 ACFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (210)
Q Consensus 43 ~~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~qh~ 96 (210)
..|.|+.|+..|. ...|..|+.. |.. .+.-.|++|.... ..++..|+...++
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 71 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRT-HTG-EKPYKCDECGKAFIQRSHLIGHHRVHTG 71 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTT-TCC-SCSEECSSSCCEESSHHHHHHHGGGSCC
T ss_pred CCEECCCCCcccCCHHHHHHHHHH-cCC-CcCeeCCCCCCccCCHHHHHHHHHHhCC
Confidence 4699999999664 6789999865 544 3567999999874 3489999876554
No 18
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.39 E-value=0.0091 Score=41.36 Aligned_cols=54 Identities=19% Similarity=0.425 Sum_probs=41.8
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~ 96 (210)
..|.|+.|+..| ....|..|+...|....+.-.|++|...-. .++..|+...|+
T Consensus 34 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 90 (95)
T 2yt9_A 34 KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90 (95)
T ss_dssp CSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSC
T ss_pred CCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcC
Confidence 359999999955 567899999775544457889999998754 489999976665
No 19
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=95.36 E-value=0.0094 Score=39.94 Aligned_cols=50 Identities=18% Similarity=0.374 Sum_probs=27.2
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhh
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQH 95 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh 95 (210)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|..... .++..|+...+
T Consensus 29 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~ 81 (82)
T 2kmk_A 29 PYPCQYCGKRFHQKSDMKKHTFI-HTG-EKPHKCQVCGKAFSQSSNLITHSRKHT 81 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHT-CCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred CeeCCcCChhhCCHHHHHHHHHH-hcC-CCCCcCCCcchhhCChHHHHHHHHhhC
Confidence 36677776644 45556666654 322 23456777666532 35666665443
No 20
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.24 E-value=0.011 Score=41.07 Aligned_cols=51 Identities=16% Similarity=0.307 Sum_probs=30.9
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~ 96 (210)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|..... .++..|+...++
T Consensus 8 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 61 (96)
T 2dmd_A 8 PHKCEVCGKCFSRKDKLKTHMRC-HTG-VKPYKCKTCDYAAADSSSLNKHLRIHSD 61 (96)
T ss_dssp CCCBTTTTBCCCCHHHHHHHGGG-CCC-CCSEECSSSCCEESSHHHHHHHHHHSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHh-cCC-CCCEeCCCCCCccCCHHHHHHHHHHhCC
Confidence 47777777755 45567777764 322 34456777776533 367777765443
No 21
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.22 E-value=0.018 Score=41.49 Aligned_cols=53 Identities=15% Similarity=0.300 Sum_probs=33.0
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccC-CCcccccCcccccchh--hhHHhhHhhhhc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHC-FEMKNAVCPLCAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~-~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~ 96 (210)
.|.|++|+..| ....|..|+...|. ...+.-.|++|..... .++..|+...++
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 91 (124)
T 2dlq_A 35 PFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG 91 (124)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred CeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence 47788887743 56677777765432 2334567888877633 367777765544
No 22
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=95.20 E-value=0.022 Score=40.26 Aligned_cols=53 Identities=19% Similarity=0.392 Sum_probs=37.4
Q ss_pred cccccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhc
Q 028361 42 KACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 42 ~~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~ 96 (210)
...|.|++|+..| ....|..|+.. |.. .+.-.|++|..... .++..|+...++
T Consensus 15 ~~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 70 (106)
T 2ee8_A 15 KKEFICKFCGRHFTKSYNLLIHERT-HTD-ERPYTCDICHKAFRRQDHLRDHRYIHSK 70 (106)
T ss_dssp CCCCBCSSSCCBCSSHHHHHHHHHH-HCC-SCCCBCSSSCCBCSCHHHHHHHGGGSCC
T ss_pred CcCeECCCCCCccCCHHHHHHHHHH-cCC-CCCcCCCCccchhCCHHHHHHHHHHhCC
Confidence 4468999998865 46678888865 432 35578999988743 478888876554
No 23
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.19 E-value=0.0084 Score=40.47 Aligned_cols=54 Identities=17% Similarity=0.359 Sum_probs=40.5
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCC--CcccccCcccccchh--hhHHhhHhhhhcc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCF--EMKNAVCPLCAANLG--KDAAEHFMVQHAS 97 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~--e~~~~vCPvC~~~v~--~d~i~Hi~~qh~~ 97 (210)
-.|.|++|+..| ....|..|+.. |.. ..+.-.|++|..... .++..|+...|..
T Consensus 6 k~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~ 64 (78)
T 2d9h_A 6 SGLQCEICGFTCRQKASLNWHQRK-HAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64 (78)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH-HHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred cCeECCCCCCeeCCHHHHHHHHHH-hhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence 359999999965 46778999865 443 246679999998754 4899999766754
No 24
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=95.16 E-value=0.023 Score=37.92 Aligned_cols=53 Identities=19% Similarity=0.327 Sum_probs=39.9
Q ss_pred cccccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhhhhc
Q 028361 42 KACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (210)
Q Consensus 42 ~~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~qh~ 96 (210)
...|.|+.|+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+...++
T Consensus 15 ~~~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 70 (74)
T 2lce_A 15 DKPYKCDRCQASFRYKGNLASHKTV-HTG-EKPYRCNICGAQFNRPANLKTHTRIHSG 70 (74)
T ss_dssp CCSBCCTTSSCCBSCHHHHHHHHHH-HCC-CCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred CCCeECCCCCceeCCHHHHHHHHHH-cCC-CCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence 4569999999966 56788999865 543 3557899999874 3489999886544
No 25
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=95.05 E-value=0.015 Score=39.78 Aligned_cols=49 Identities=18% Similarity=0.532 Sum_probs=25.9
Q ss_pred ccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhh
Q 028361 45 FPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQH 95 (210)
Q Consensus 45 f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh 95 (210)
|.|++|+..| ....|..|+.. |.. .+.-.|++|..... .++..|+.+.+
T Consensus 35 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~ 86 (90)
T 1a1h_A 35 FQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHTKIHL 86 (90)
T ss_dssp EECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHGGGG
T ss_pred ccCCCCCcccCCHHHHHHHHHH-cCC-CCCccCCCCCchhCCHHHHHHHHHHhc
Confidence 6666666633 34556666653 322 23345666666532 35666665443
No 26
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.03 E-value=0.02 Score=39.63 Aligned_cols=52 Identities=15% Similarity=0.347 Sum_probs=39.4
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhhhhc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~qh~ 96 (210)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+...|+
T Consensus 35 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 89 (96)
T 2dmd_A 35 KPYKCKTCDYAAADSSSLNKHLRI-HSD-ERPFKCQICPYASRNSSQLTVHLRSHTG 89 (96)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH-SCC-CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred CCEeCCCCCCccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHhcC
Confidence 359999999955 56789999976 543 3567899999874 3488999886654
No 27
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=94.96 E-value=0.015 Score=38.85 Aligned_cols=51 Identities=20% Similarity=0.528 Sum_probs=38.8
Q ss_pred ccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhhhhcc
Q 028361 45 FPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHAS 97 (210)
Q Consensus 45 f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~qh~~ 97 (210)
|.|+.|+..| ....|..|+.. |. ..+.-.|++|.... ..++..|+...++.
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 55 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLI-HS-DTRPYPCQYCGKRFHQKSDMKKHTFIHTGE 55 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHH-HH-TCCCEECSSSCCEESSHHHHHHHHHHHHTC
T ss_pred ccCCCCcccccCchhHHHHHHH-cC-CCCCeeCCcCChhhCCHHHHHHHHHHhcCC
Confidence 7899999955 56789999976 43 24567899999875 34899999866553
No 28
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.89 E-value=0.018 Score=41.50 Aligned_cols=53 Identities=21% Similarity=0.402 Sum_probs=40.5
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhcc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHAS 97 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~~ 97 (210)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|..... .++..|+...|+.
T Consensus 65 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~ 120 (124)
T 2dlq_A 65 QVFTCSVCQETFRRRMELRLHMVS-HTG-EMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120 (124)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH-HSS-SCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred CCeECCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence 469999999955 56779999866 443 35678999998744 4899999877754
No 29
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.82 E-value=0.016 Score=41.43 Aligned_cols=54 Identities=20% Similarity=0.356 Sum_probs=36.4
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhhhhcchh
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHASSL 99 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~qh~~~~ 99 (210)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|.... ..++..|++..|....
T Consensus 37 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~ 93 (110)
T 2csh_A 37 PYGCGVCGKKFKMKHHLVGHMKI-HTG-IKPYECNICAKRFMWRDSFHRHVTSCTKSYE 93 (110)
T ss_dssp SEECTTTSCEESSSHHHHHHHTT-TCC-CCCEECSSSCCEESCHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHH-cCC-CCCeeCCCCcchhcCHHHHHHHHHHcccccc
Confidence 48888888744 44677888765 433 2456788888764 3478888887665543
No 30
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=94.73 E-value=0.021 Score=41.15 Aligned_cols=52 Identities=21% Similarity=0.377 Sum_probs=40.6
Q ss_pred ccccCCCCCcchh-HHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhhhhc
Q 028361 43 ACFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (210)
Q Consensus 43 ~~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~qh~ 96 (210)
..|.||.|+..|. ...|..|+.. |.- .++-.|++|...- ..++.+|++..|.
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~-H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~ 81 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRL-LHA-AQVFPCKYCPATFYSSPGLTRHINKCHP 81 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHT-TSC-SSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred CCEECCCCCCCcCcHHHHhhhhhh-ccC-CCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence 4699999999664 6789999876 543 4677999999974 4589999986664
No 31
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=94.43 E-value=0.036 Score=39.12 Aligned_cols=52 Identities=17% Similarity=0.299 Sum_probs=39.3
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~ 96 (210)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|..... .++..|+.+.++
T Consensus 44 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 98 (106)
T 2ee8_A 44 RPYTCDICHKAFRRQDHLRDHRYI-HSK-EKPFKCQECGKGFCQSRTLAVHKTLHMQ 98 (106)
T ss_dssp CCCBCSSSCCBCSCHHHHHHHGGG-SCC-CCTTSCSSSCCCCSSHHHHHHHHHHTTS
T ss_pred CCcCCCCccchhCCHHHHHHHHHH-hCC-CCCeECCCcCCcccCHHHHHHHHHHhCC
Confidence 459999999965 66789999865 543 35578999998753 489999986554
No 32
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=94.19 E-value=0.027 Score=38.86 Aligned_cols=54 Identities=20% Similarity=0.507 Sum_probs=37.5
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhhhhcchh
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHASSL 99 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~qh~~~~ 99 (210)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+...|+..+
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~ 59 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHRDIQHILPI 59 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHHHHTHHHH
T ss_pred CCcCCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCCCCccCCHHHHHHHHHHhCCCcc
Confidence 47888888855 45678888765 533 3456788888764 3478888888876433
No 33
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=94.04 E-value=0.0078 Score=41.69 Aligned_cols=52 Identities=12% Similarity=0.076 Sum_probs=42.0
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhcch
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHASS 98 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~~~ 98 (210)
.|.|++|+..| ....|..|+...|. ...+|+.|..... .++..||...|+..
T Consensus 31 ~~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~c~~C~~~f~~~~~L~~H~~~~h~~~ 85 (88)
T 1llm_C 31 PFACDICGRKFARSDERKRHRDIQHI---LPILEDKVEELLSKNYHLENEVARLKKLV 85 (88)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCCccCCHHHHHHHHHHhCC---CcchHHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 49999999965 56889999988773 6789999998654 37999999777654
No 34
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=93.82 E-value=0.041 Score=39.20 Aligned_cols=45 Identities=24% Similarity=0.427 Sum_probs=34.6
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHh
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFM 92 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~ 92 (210)
.|.|++|+..| ....|..|+.. | .+.-.|++|..... .++..|++
T Consensus 16 ~~~C~~C~~~f~~~~~l~~H~~~-H---~~~~~C~~C~~~f~~~~~l~~H~~ 63 (107)
T 1wjp_A 16 VYQCRLCNAKLSSLLEQGSHERL-C---RNAAVCPYCSLRFFSPELKQEHES 63 (107)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-H---HHSBCCTTTCCCBSSHHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHHH-C---CCCccCCCCCCccCCHHHHHHHHH
Confidence 59999999855 56778888876 5 36678999988753 47888884
No 35
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=93.80 E-value=0.035 Score=37.36 Aligned_cols=49 Identities=24% Similarity=0.493 Sum_probs=38.4
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhhh
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQ 94 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~q 94 (210)
-|.|+.|+..| ....|..|+.. |.- .++-.|++|...- ..++..|+.+.
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~~-Ht~-ekp~~C~~C~k~F~~~~~L~~H~~~H 55 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRRA-HLG-YRPRSCPECGKCFRDQSEVNRHLKVH 55 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HHT-CCCEECTTTCCEESSHHHHHHHGGGG
T ss_pred CccCCCCCCEeCCHHHHHHHHHH-hCC-CcCeECCCCCCCcCCHHHHHHHhCcc
Confidence 38999999966 46779999865 754 4677999999974 45899998763
No 36
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.18 E-value=0.082 Score=31.85 Aligned_cols=34 Identities=18% Similarity=0.128 Sum_probs=25.9
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..| ....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2ytn_A 12 PYKCNECGKVFTQNSHLARHRGI-HTGE-KPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHGGG-TSCC-CCCSCCCC
T ss_pred CeECCCCCCeeCCHHHHHHHhhh-cCCC-CCCCCCCC
Confidence 49999999855 45678889754 6544 67789998
No 37
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=93.15 E-value=0.057 Score=38.45 Aligned_cols=50 Identities=22% Similarity=0.452 Sum_probs=38.1
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~ 96 (210)
.|.|++|+..| ....|..|+ . |.- .+.-.|++|..... .++..|+...|.
T Consensus 42 ~~~C~~C~~~f~~~~~l~~H~-~-H~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 94 (107)
T 1wjp_A 42 AAVCPYCSLRFFSPELKQEHE-S-KCE-YKKLTCLECMRTFKSSFSIWRHQVEVHN 94 (107)
T ss_dssp SBCCTTTCCCBSSHHHHHHHH-H-HCS-TGGGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred CccCCCCCCccCCHHHHHHHH-H-cCC-CCCccCccccchhCCHHHHHHHHHHHcC
Confidence 59999999855 467788998 3 664 45679999998754 489999975554
No 38
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.92 E-value=0.047 Score=39.21 Aligned_cols=52 Identities=13% Similarity=0.105 Sum_probs=32.5
Q ss_pred cccCCCCCcch-hHHHhHhhhhhc-cCCCcccccCcccccch----hhhHHhhHhhhh
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEE-HCFEMKNAVCPLCAANL----GKDAAEHFMVQH 95 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~e-H~~e~~~~vCPvC~~~v----~~d~i~Hi~~qh 95 (210)
.|.|+.|+..| ....|..|+... |..+.....|++|.... ..++..|+...+
T Consensus 19 ~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~ 76 (115)
T 2dmi_A 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76 (115)
T ss_dssp SEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCC
T ss_pred CEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccC
Confidence 48899998854 466788888641 32223334588887643 346777776533
No 39
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=92.81 E-value=0.089 Score=35.00 Aligned_cols=52 Identities=25% Similarity=0.537 Sum_probs=39.4
Q ss_pred cccCCC--CCcch-hHHHhHhhhhhccCCCcccccCcc--cccch--hhhHHhhHhhhhc
Q 028361 44 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFMVQHA 96 (210)
Q Consensus 44 ~f~CP~--C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv--C~~~v--~~d~i~Hi~~qh~ 96 (210)
.|+|++ |+..| ....|..|+...|.. .+.-.|++ |.... ..++..|+...++
T Consensus 7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~ 65 (79)
T 2dlk_A 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIH-QKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65 (79)
T ss_dssp SEECSSTTTCCEESSHHHHHHHHHHGGGS-CCCEECSCTTTCCEESSHHHHHHHHHHHHT
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHHhCC-CCCeECCCCCCcCccCCHHHHHHHHHHhCC
Confidence 477887 99966 567899998766765 46678998 99874 3489999986554
No 40
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.74 E-value=0.093 Score=31.54 Aligned_cols=35 Identities=17% Similarity=0.081 Sum_probs=26.6
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..|. ...|..|+...|..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~~H~~~-k~~~C~~C 47 (47)
T 2epx_A 12 PYECIECGKAFIQNTSLIRHWRYYHTGE-KPSGPSSG 47 (47)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHTTTTTTS-CSSSCCCC
T ss_pred CEECCccCchhCChHHHHHHhHhhcCCC-CCCCCCCC
Confidence 599999999554 577888987457543 56789988
No 41
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=92.68 E-value=0.051 Score=40.76 Aligned_cols=51 Identities=25% Similarity=0.458 Sum_probs=35.6
Q ss_pred cccCCC--CCcch-hHHHhHhhhhhccCCCcccccCcc--cccchh--hhHHhhHhhhhc
Q 028361 44 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 44 ~f~CP~--C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv--C~~~v~--~d~i~Hi~~qh~ 96 (210)
.|.|++ |+..| ....|..|+.. |.. .+.-.|++ |..... .++..|+...|.
T Consensus 67 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 124 (155)
T 2gli_A 67 PHKCTFEGCRKSYSRLENLKTHLRS-HTG-EKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124 (155)
T ss_dssp CCCCCSTTCCCCCSSHHHHHHHHHH-TTT-CCCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred CccCCCCCCCCcccCHHHHHHHHHH-cCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 488987 98844 56678888865 443 35568988 887643 478888855554
No 42
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=92.65 E-value=0.11 Score=36.00 Aligned_cols=56 Identities=16% Similarity=0.360 Sum_probs=37.9
Q ss_pred cccccccCCC--CCcch-hHHHhHhhhhhccCCCcccccCc--ccccch--hhhHHhhHhhhhcc
Q 028361 40 DVKACFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCP--LCAANL--GKDAAEHFMVQHAS 97 (210)
Q Consensus 40 d~~~~f~CP~--C~e~~-d~~~L~~H~~~eH~~e~~~~vCP--vC~~~v--~~d~i~Hi~~qh~~ 97 (210)
+....|.|++ |+..| ....|..|+.. |.. .+.-.|+ +|.... ..++..|+...++.
T Consensus 11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~ 73 (100)
T 2ebt_A 11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRT-HTG-EKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73 (100)
T ss_dssp CSCCCEECCSSSCCCEESCHHHHHHHHHH-HSC-CCCEECCSSSCCCEESSHHHHHHHHHHHTSC
T ss_pred ccCcceEcCCCCCCCcccCHHHHHHHHHH-hCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhCCC
Confidence 4456788887 98855 56778888875 432 3456786 588764 34788888765543
No 43
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=92.58 E-value=0.058 Score=41.33 Aligned_cols=49 Identities=16% Similarity=0.343 Sum_probs=31.1
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhh
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMV 93 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~ 93 (210)
-.|.|+.|+..| ....|..|+.. |.. .++-.|++|...- ..++..|+.+
T Consensus 21 k~y~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C~k~F~~~~~L~~H~~~ 72 (133)
T 2lt7_A 21 VYYICIVCKRSYVCLTSLRRHFNI-HSW-EKKYPCRYCEKVFPLAEYRTKHEIH 72 (133)
T ss_dssp EEEEETTTCCEESCHHHHHHHHHH-HHC-CSCEECSSSSCEESSHHHHHHHHHH
T ss_pred cCeECCCCCCCcCCHHHHHHHHHH-cCC-CCCeeCCccCeecccccchhhhccc
Confidence 457888887744 45667777653 543 2455788887753 3467777664
No 44
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=92.49 E-value=0.12 Score=31.13 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=25.9
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em0_A 12 TWKCRECDMCFSQASSLRLHQNV-HVG-EKPSGPSSG 46 (46)
T ss_dssp CCCCSSSCCCCSSHHHHHHHGGG-GSS-SSCSCSSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCcCCCCC
Confidence 49999999955 45778889765 654 356789998
No 45
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=92.49 E-value=0.094 Score=37.87 Aligned_cols=50 Identities=22% Similarity=0.489 Sum_probs=31.8
Q ss_pred cccCC--CCCcch-hHHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhhhhc
Q 028361 44 CFPCP--FCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (210)
Q Consensus 44 ~f~CP--~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~qh~ 96 (210)
.|.|| .|+..| ....|..|+.. | ..+.-.|++|.... ..++..|+...++
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~-h--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 59 (124)
T 1ubd_C 5 TIACPHKGCTKMFRDNSAMRKHLHT-H--GPRVHVCAECGKAFVESSKLKRHQLVHTG 59 (124)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHGG-G--SCCCEECTTTCCEESSHHHHHHHGGGTSC
T ss_pred cccCCCCCCcCccCCHHHHHHHHHH-c--CCCCeECCCCCchhCCHHHHHHHHHHcCC
Confidence 57777 687754 45677777753 5 45566788877663 3367777765443
No 46
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=92.33 E-value=0.097 Score=33.05 Aligned_cols=39 Identities=13% Similarity=0.327 Sum_probs=30.3
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~ 82 (210)
..|.|+.|+..| ....|..|+...|.- .+.-.|++|...
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~~H~~-~k~~~C~~C~k~ 50 (54)
T 2eps_A 11 KPYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQVWVSG 50 (54)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSSSSCCS
T ss_pred CCeECCCCCcccCCHHHHHHHHHHhcCC-CCCccCCCCCCC
Confidence 359999999965 567789998756765 356789999865
No 47
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.18 E-value=0.098 Score=31.47 Aligned_cols=35 Identities=17% Similarity=0.107 Sum_probs=26.4
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
..|.|++|+..| ....|..|+.. |..+ +.-.|++|
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2eq0_A 11 KPYKCHECGKVFRRNSHLARHQLI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CCEECTTTCCEESSHHHHHHHHTT-TCCC-CCSCCSCC
T ss_pred CCeECCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 359999999955 45678889755 6654 66789998
No 48
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=92.15 E-value=0.093 Score=35.59 Aligned_cols=52 Identities=19% Similarity=0.474 Sum_probs=38.4
Q ss_pred cccCCC--CCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhcc
Q 028361 44 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHAS 97 (210)
Q Consensus 44 ~f~CP~--C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~~ 97 (210)
.|.||+ |+..| ....|..|+.. |.. .+.-.|++|..... .++..|+...++.
T Consensus 4 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 60 (90)
T 1a1h_A 4 PYACPVESCDRRFSQSGSLTRHIRI-HTG-QKPFQCRICMRNFSRSDHLTTHIRTHTGE 60 (90)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHHH-HHC-CCCEECTTTCCEESCHHHHHHHHHHHHCC
T ss_pred ceECCCCCCCCccCCHHHHHHHHHH-hCC-CCCccCCCCCcccCCHHHHHHHHHHcCCC
Confidence 589995 99965 46778899875 432 35578999998743 4889999866553
No 49
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.02 E-value=0.13 Score=30.84 Aligned_cols=34 Identities=12% Similarity=-0.024 Sum_probs=25.8
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eop_A 12 PHECRECGKSFSFNSQLIVHQRI-HTG-ENPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TTT-SCCSCCCCC
T ss_pred CeeCCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 59999999855 45778889765 654 356789988
No 50
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.01 E-value=0.11 Score=31.14 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=25.8
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..|. ...|..|+.. |..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2eov_A 12 PYKCSDCGKSFTWKSRLRIHQKC-HTGE-RHSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHHH-HSCC-SSCCSCCC
T ss_pred CccCCccChhhCCHHHHHHHHHh-cCCC-CCCCCCCC
Confidence 499999998554 5778899754 6543 56789988
No 51
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=91.96 E-value=0.1 Score=31.36 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=25.9
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..| ....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2ema_A 12 RYKCNECGKVFSRNSQLSQHQKI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTG-GGCC-CCCSSSCC
T ss_pred CcCCCCCcchhCCHHHHHHHHHh-cCCC-CCCCCCCC
Confidence 49999999965 45678889765 6543 66789998
No 52
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.94 E-value=0.083 Score=39.17 Aligned_cols=48 Identities=23% Similarity=0.415 Sum_probs=37.1
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCC--CcccccCcccccch--hhhHHhhH
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCF--EMKNAVCPLCAANL--GKDAAEHF 91 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~--e~~~~vCPvC~~~v--~~d~i~Hi 91 (210)
.|.|++|+..| ....|..|+...|.. ..++-.|++|.... ..++..|+
T Consensus 18 py~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~ 70 (102)
T 2ghf_A 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHN 70 (102)
T ss_dssp SEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHH
T ss_pred CcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHH
Confidence 59999999966 467799998766853 35678999999874 34888994
No 53
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.75 E-value=0.11 Score=31.13 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=25.8
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..| ....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2eoe_A 12 PYKCNECGKVFTQNSHLANHQRI-HTGV-KPSGPSSG 46 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHGG-GSCC-CSCSSCCC
T ss_pred CeECCCcChhhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 49999999855 45678889754 6554 66789998
No 54
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.75 E-value=0.1 Score=31.41 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=25.8
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..| ....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~c 46 (46)
T 2ytk_A 12 PYKCNECGKVFTQNSHLTNHWRI-HTGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSSS-SCSSCCCC
T ss_pred CEeCCcCCCccCCHHHHHHHHHH-HCCC-CCCCCCCC
Confidence 59999999955 45678888864 6543 56789998
No 55
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.73 E-value=0.14 Score=30.76 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=25.8
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..| ....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2eoq_A 12 PFKCDICGKSFCGRSRLNRHSMV-HTAE-KPSGPSSG 46 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-TTCC-CSSSCCCC
T ss_pred CcCCCcCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 59999999865 55778889764 6543 56789988
No 56
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.69 E-value=0.12 Score=31.02 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=26.3
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
..|.|++|+..| ....|..|+.. |..+ ++-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2ep2_A 11 KPYECSICGKSFTKKSQLHVHQQI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHT-TSSC-CSCCSCCC
T ss_pred cCcCCCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCCC
Confidence 359999999855 55778889864 6543 66789988
No 57
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.53 E-value=0.13 Score=30.96 Aligned_cols=34 Identities=15% Similarity=0.076 Sum_probs=25.7
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2ytj_A 12 PYICAECGKAFTIRSNLIKHQKI-HTK-QKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-TSC-CCCSSCSCC
T ss_pred CeECCCCChhhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 49999999955 45678889865 654 366789988
No 58
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.51 E-value=0.13 Score=30.95 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=25.9
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..| ....|..|+.. |..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2ene_A 12 PYKCNECGKVFRHNSYLSRHQRI-HTGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TCCC-CCCSCCCC
T ss_pred CeECCCCCchhCChHHHHHHHhh-cCCC-CCCCCCCC
Confidence 49999999955 45678889765 6543 66789988
No 59
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=91.43 E-value=0.099 Score=34.45 Aligned_cols=49 Identities=20% Similarity=0.487 Sum_probs=35.7
Q ss_pred ccccCCC--CCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhh
Q 028361 43 ACFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMV 93 (210)
Q Consensus 43 ~~f~CP~--C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~ 93 (210)
..|.||+ |+..| ....|..|+.. |.. .+.-.|++|..... .++..|+..
T Consensus 18 ~~~~C~~~~C~k~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 18 RPYACPVESCDRRFSRSDELTRHIRI-HTG-QKPFQCRICMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp CCEECSSTTBCCEESSHHHHHHHHHH-HHC-CCCEECTTTCCEESCHHHHHHHHTT
T ss_pred CccCCcCCCCCCccCCHHHHHHHHHh-hCC-CCCeECCCCCchhCCHHHHHHHHHh
Confidence 3599986 99955 56778899765 543 35578999998754 478888763
No 60
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=91.41 E-value=0.088 Score=41.08 Aligned_cols=52 Identities=17% Similarity=0.376 Sum_probs=37.4
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhhhhcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHAS 97 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~qh~~ 97 (210)
.|.|++|+..| ....|..|+...+. .+.-.|++|.... ..++..|+...++.
T Consensus 105 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~~ 159 (190)
T 2i13_A 105 PYACPECGKSFSQLAHLRAHQRTHTG--EKPYKCPECGKSFSREDNLHTHQRTHTGE 159 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHCC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhCC--CCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence 58999999855 45678888876332 3456899998874 34888998876653
No 61
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=91.31 E-value=0.13 Score=31.50 Aligned_cols=37 Identities=14% Similarity=0.108 Sum_probs=28.3
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCcccccCccccc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAA 81 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~ 81 (210)
..|.|++|+..| ....|..|+.. |.- .+.-.|++|.+
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C~k 48 (48)
T 2epr_A 11 KQVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSSGPSSG 48 (48)
T ss_dssp CSEEETTTTEEESSHHHHHHHGGG-SCS-CCCCCSCCCCC
T ss_pred cCeeCCCCCcccCCHHHHHHHHHh-cCC-CCCccCCCCCC
Confidence 469999999965 56788999865 654 35678999964
No 62
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=91.20 E-value=0.19 Score=33.96 Aligned_cols=52 Identities=19% Similarity=0.400 Sum_probs=34.8
Q ss_pred ccccCCC--CCcch-hHHHhHhhhhhccCCCcccccCc--ccccch--hhhHHhhHhhhhc
Q 028361 43 ACFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCP--LCAANL--GKDAAEHFMVQHA 96 (210)
Q Consensus 43 ~~f~CP~--C~e~~-d~~~L~~H~~~eH~~e~~~~vCP--vC~~~v--~~d~i~Hi~~qh~ 96 (210)
..|.|++ |+..| ....|..|+.. |.. .+.-.|+ +|.... ..++..|+...++
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 62 (89)
T 2wbs_A 4 ATHTCDYAGCGKTYTKSSHLKAHLRT-HTG-EKPYHCDWDGCGWKFARSDELTRHYRKHTG 62 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHTT-SCS-SCCEECCSTTTCCEESSHHHHHHHHHHHHC
T ss_pred CCeeCCCCCCCCcCCCHHHHHHHHHh-cCC-CCCcCCCCCCCCCccCCHHHHHHHHHHcCC
Confidence 4688888 88855 56678888865 432 3456787 587764 3477888875544
No 63
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.12 E-value=0.18 Score=30.19 Aligned_cols=34 Identities=18% Similarity=0.033 Sum_probs=25.7
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..|. ...|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2epz_A 12 PFDCIDCGKAFSDHIGLNQHRRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHTT-TTT-CCCCSSCCC
T ss_pred CeECCCCCceeCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 499999999554 5778889764 654 366789988
No 64
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=91.10 E-value=0.15 Score=30.67 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=25.4
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emk_A 12 PYECKECGKAFSQTTHLIQHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHHH-HSS-CCCSSCCCC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 49999999855 45678888865 654 366789988
No 65
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=91.10 E-value=0.23 Score=37.03 Aligned_cols=53 Identities=19% Similarity=0.189 Sum_probs=30.4
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCC-CcccccCcccc-----cc--hhhhHHhhHhhhhc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCF-EMKNAVCPLCA-----AN--LGKDAAEHFMVQHA 96 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~-e~~~~vCPvC~-----~~--v~~d~i~Hi~~qh~ 96 (210)
.|+|+.|+..| ....|..|+...|.. +.+.-+|++|. .. -...+..|+...++
T Consensus 3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~ 64 (155)
T 2gli_A 3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64 (155)
T ss_dssp BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC
T ss_pred cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCC
Confidence 46777787744 466777777764432 23445666533 22 22366777765444
No 66
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.09 E-value=0.13 Score=30.95 Aligned_cols=34 Identities=18% Similarity=0.134 Sum_probs=25.6
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emy_A 12 PYECHECGKAFSRKYQLISHQRT-HAG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTT-SCCSCSSCC
T ss_pred CcCCCCCCcccCcHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 49999999855 45778889765 654 356789988
No 67
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.04 E-value=0.18 Score=30.30 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=25.8
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytq_A 12 PYGCSECGKAFSSKSYLIIHMRT-HSG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHTT-TCC-SCSSCCCCC
T ss_pred CcCCCccChhhCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 49999999855 45778899765 654 366789988
No 68
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=90.92 E-value=0.17 Score=30.26 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=25.6
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..|- ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2el4_A 12 PYGCSQCAKTFSLKSQLIVHQRS-HTG-VKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHGGG-SSS-CCCSCCTTC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 499999999554 5678889754 654 356789998
No 69
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.91 E-value=0.19 Score=30.05 Aligned_cols=34 Identities=18% Similarity=0.126 Sum_probs=25.7
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eq4_A 12 LYNCKECGKSFSRAPCLLKHERL-HSG-EKPSGPSSG 46 (46)
T ss_dssp CCCBTTTTBCCSCHHHHHHHHHH-CCS-SSCCCCCCC
T ss_pred CeECCCCCCccCchHHHHHHHHh-cCC-CCCCCCCCC
Confidence 49999999955 45678899755 654 366789988
No 70
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.86 E-value=0.18 Score=30.34 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=25.8
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..|. ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2emf_A 12 HFECTECGKAFTRKSTLSMHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESCHHHHHHHGGG-TSC-SSCSCCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 499999999654 5678889865 643 466789998
No 71
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.80 E-value=0.2 Score=29.93 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=25.5
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytr_A 12 PYKCNECGKAFSQTSKLARHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp TTCCTTTCCCCSSHHHHHHHHTT-TTT-CSCCCSCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 49999999955 45678889755 654 356789988
No 72
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.80 E-value=0.11 Score=31.15 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=25.4
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..|. ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2emh_A 12 PYICTVCGKAFTDRSNLIKHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-HHC-SSCSSSCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 499999998554 5678888754 654 366789988
No 73
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=90.76 E-value=0.14 Score=36.26 Aligned_cols=51 Identities=16% Similarity=0.381 Sum_probs=38.4
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHAS 97 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~~ 97 (210)
.|.| .|+..| ....|..|+.. |.. .+.-.|++|..... .++..|+...++.
T Consensus 10 ~~~C-~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 63 (110)
T 2csh_A 10 LYPC-QCGKSFTHKSQRDRHMSM-HLG-LRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63 (110)
T ss_dssp CEEC-TTSCEESSHHHHHHHHHH-HSC-CCSEECTTTSCEESSSHHHHHHHTTTCCC
T ss_pred CEec-cCCCccCCHHHHHHHHHH-cCC-CcCccCCCCCcccCCHHHHHHHHHHcCCC
Confidence 5999 999955 56789999976 433 35679999998754 4899999876553
No 74
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=90.74 E-value=0.14 Score=39.93 Aligned_cols=50 Identities=18% Similarity=0.387 Sum_probs=23.4
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhhhh
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 95 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~qh 95 (210)
.|.|++|+..| ....|..|+...|. .+.-.|++|.... ..++..|+...+
T Consensus 49 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~ 101 (190)
T 2i13_A 49 PYKCPECGKSFSDKKDLTRHQRTHTG--EKPYKCPECGKSFSQRANLRAHQRTHT 101 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred CccCCCcCchhCCHHHHHHHHHhcCC--CCCccCcccCCccCCHHHHHHHHHhcC
Confidence 35566665533 33455555544221 2334555555542 225555555433
No 75
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=90.74 E-value=0.18 Score=30.12 Aligned_cols=34 Identities=18% Similarity=0.093 Sum_probs=25.9
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em9_A 12 PYNCKECGKSFRWASCLLKHQRV-HSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG-GTS-CCCCSTTCC
T ss_pred CeECCccccccCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 59999999965 45788889755 654 356789988
No 76
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.66 E-value=0.18 Score=30.29 Aligned_cols=34 Identities=24% Similarity=0.187 Sum_probs=26.0
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..| ....|..|+.. |..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQRS-HSGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-SCCS-SCCSSCCC
T ss_pred CcCCCCCCCcCCChHHHHHHHHH-hCCC-CCCCCCCC
Confidence 49999999955 55788899755 6543 66789988
No 77
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.54 E-value=0.18 Score=30.32 Aligned_cols=34 Identities=15% Similarity=0.033 Sum_probs=26.0
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em5_A 12 SHQCHECGRGFTLKSHLNQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TSC-SCCSSCCCC
T ss_pred CeECCcCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 59999999955 56788899755 654 356789988
No 78
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.46 E-value=0.15 Score=30.48 Aligned_cols=34 Identities=15% Similarity=0.051 Sum_probs=25.8
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..|- ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2epw_A 12 PCKCTECGKAFCWKSQLIMHQRT-HVD-DKHSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH-CCS-CCCSCCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 499999998554 5778889865 654 356789988
No 79
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.40 E-value=0.2 Score=29.95 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=25.7
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eme_A 12 PYVCDYCGKAFGLSAELVRHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GCC-CSCCSSCCC
T ss_pred CeECCCCChhhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 49999999955 45778899854 654 356789988
No 80
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.38 E-value=0.16 Score=30.46 Aligned_cols=34 Identities=18% Similarity=0.093 Sum_probs=25.5
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..|. ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytg_A 12 PFKCGECGKSYNQRVHLTQHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSSHHHHTTGGG-GSS-CCSSCSCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999554 5678889754 654 356789988
No 81
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=90.30 E-value=0.15 Score=33.91 Aligned_cols=50 Identities=18% Similarity=0.310 Sum_probs=24.7
Q ss_pred ccC--CCCCcch-hHHHhHhhhhhccCCCcccccCcc--cccch--hhhHHhhHhhhhc
Q 028361 45 FPC--PFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFMVQHA 96 (210)
Q Consensus 45 f~C--P~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv--C~~~v--~~d~i~Hi~~qh~ 96 (210)
|.| +.|+..| ....|..|+.. |.. .+.-.|++ |.... ..++..|+...++
T Consensus 2 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 58 (85)
T 2j7j_A 2 YVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHH-HHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred ccCCCCCCCcccCCHHHHHHHHHH-hCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 456 5566544 34455556533 322 23445655 65543 2355566655444
No 82
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=90.29 E-value=0.17 Score=30.49 Aligned_cols=34 Identities=18% Similarity=0.079 Sum_probs=25.7
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..|- ...|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ely_A 12 PFKCVECGKGFSRRSALNVHHKL-HTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCSSSCCCBSSTTHHHHHHHH-HSC-CSSCSCCCC
T ss_pred CcccCccCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 499999998554 5778889765 654 466789988
No 83
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=90.28 E-value=0.24 Score=35.66 Aligned_cols=53 Identities=17% Similarity=0.293 Sum_probs=39.0
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCcccccCcc--cccch--hhhHHhhHhhhhcc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFMVQHAS 97 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv--C~~~v--~~d~i~Hi~~qh~~ 97 (210)
..|.|+.|+..| ....|..|+.. |.. .+.-.|++ |.... ..++..|+...++.
T Consensus 33 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~ 90 (124)
T 1ubd_C 33 RVHVCAECGKAFVESSKLKRHQLV-HTG-EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 90 (124)
T ss_dssp CCEECTTTCCEESSHHHHHHHGGG-TSC-CCCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred CCeECCCCCchhCCHHHHHHHHHH-cCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCCC
Confidence 359999999955 56789999875 443 35578987 98874 34889999876653
No 84
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.21 E-value=0.16 Score=30.66 Aligned_cols=34 Identities=12% Similarity=0.103 Sum_probs=25.3
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..| ....|..|+.. |..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRL-HTGQ-RPSGPSSG 46 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHHH-HHSC-CCCCCCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 49999999855 45678888765 6543 56789988
No 85
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.15 E-value=0.12 Score=34.86 Aligned_cols=48 Identities=21% Similarity=0.450 Sum_probs=29.2
Q ss_pred ccccccccCCCCCcchhHH-H-hHhh-----hhhccCCC-cccccCcccccchhhh
Q 028361 39 DDVKACFPCPFCYLEIEAH-M-ICSH-----LQEEHCFE-MKNAVCPLCAANLGKD 86 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~~d~~-~-L~~H-----~~~eH~~e-~~~~vCPvC~~~v~~d 86 (210)
++....+.||.|.+.+... . -|-| |-..+--. ..+..||+|...+..+
T Consensus 15 ~~~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 70 (73)
T 2ysl_A 15 NKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKN 70 (73)
T ss_dssp CCCCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCC
T ss_pred HhCccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcc
Confidence 4566789999998866542 1 2333 22222221 3456899999887654
No 86
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=90.13 E-value=0.18 Score=34.01 Aligned_cols=49 Identities=16% Similarity=0.400 Sum_probs=35.8
Q ss_pred ccccCCC--CCcch-hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhh
Q 028361 43 ACFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMV 93 (210)
Q Consensus 43 ~~f~CP~--C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~ 93 (210)
..|.||+ |+..| ....|..|+.. |..+ +.-.|++|..... .++..|+..
T Consensus 34 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~ 87 (89)
T 2wbs_A 34 KPYHCDWDGCGWKFARSDELTRHYRK-HTGH-RPFQCQKCDRAFSRSDHLALHMKR 87 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHHH-HHCC-CCEECSSSSCEESSHHHHHHHGGG
T ss_pred CCcCCCCCCCCCccCCHHHHHHHHHH-cCCC-CCccCCCCCcccCCHHHHHHHHHh
Confidence 3599986 99865 56778899864 5443 5678999998743 478888763
No 87
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=90.13 E-value=0.21 Score=38.90 Aligned_cols=49 Identities=20% Similarity=0.339 Sum_probs=23.1
Q ss_pred ccCC--CCCc-chhHHHhHhhhhhccCCCcccccC--cccccch--hhhHHhhHhh
Q 028361 45 FPCP--FCYL-EIEAHMICSHLQEEHCFEMKNAVC--PLCAANL--GKDAAEHFMV 93 (210)
Q Consensus 45 f~CP--~C~e-~~d~~~L~~H~~~eH~~e~~~~vC--PvC~~~v--~~d~i~Hi~~ 93 (210)
|.|+ .|+. =.....|..|+...|....+.-+| ++|.... ..++..|+..
T Consensus 73 ~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~ 128 (190)
T 1tf6_A 73 FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFS 128 (190)
T ss_dssp EECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGG
T ss_pred eeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHH
Confidence 5555 4555 223445555554445443444455 4455442 2245555544
No 88
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.13 E-value=0.21 Score=29.94 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=25.8
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ep0_A 12 PYKCDVCHKSFRYGSSLTVHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TSS-SCCCSCCCC
T ss_pred CeeCcccCcccCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 49999999955 45778889754 654 366789988
No 89
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=90.11 E-value=0.13 Score=35.25 Aligned_cols=48 Identities=13% Similarity=0.257 Sum_probs=28.8
Q ss_pred cCccccccccCCCCCcchhHHH--hHhh-----hhhccCCCcccccCcccccchhh
Q 028361 37 IDDDVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 37 ~d~d~~~~f~CP~C~e~~d~~~--L~~H-----~~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
|+++.+..|.||.|.+.|.... -|-| +-..+- ......||+|...+..
T Consensus 1 g~~~~~~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~-~~~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 1 GSPEFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWL-DAGHKTCPKSQETLLH 55 (78)
T ss_dssp CCCCCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHH-TTTCCBCTTTCCBCSS
T ss_pred CCcCCcccCCCCCccccccCCEEcCCCCeecHHHHHHHH-HHCcCCCCCCcCCCCh
Confidence 3556788999999988554322 1222 111111 2236789999998764
No 90
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.11 E-value=0.14 Score=30.77 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=25.9
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..|. ...|..|+.. |..+ +.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2en6_A 12 PYGCNECGKTFSQKSILSAHQRT-HTGE-KPSGPSSG 46 (46)
T ss_dssp CEEETTTTEEESSHHHHHHHHHH-HSSC-CCSSSCCC
T ss_pred CeECCCCCcccCchHHHHHHHHH-cCCC-CCCCCCCC
Confidence 599999998554 5778889865 6543 66789988
No 91
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=90.06 E-value=0.21 Score=33.25 Aligned_cols=48 Identities=17% Similarity=0.200 Sum_probs=36.6
Q ss_pred ccccCCC--CCcch-hHHHhHhhhhhccCCCcccccCcc---cccch--hhhHHhhHhhhh
Q 028361 43 ACFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPL---CAANL--GKDAAEHFMVQH 95 (210)
Q Consensus 43 ~~f~CP~--C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv---C~~~v--~~d~i~Hi~~qh 95 (210)
..|.||+ |+..| ....|..|+...+. -.|++ |...- ..++..|+...|
T Consensus 30 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 30 LPYECPHEGCDKRFSLPSRLKRHEKVHAG-----YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp CCEECCSTTCCCEESSHHHHHHHHHHHHS-----EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CCeeCCCCCCcCccCCHHHHHHHHHHhCC-----CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 3599999 99955 67889999977544 57999 98864 458899987654
No 92
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.80 E-value=0.23 Score=29.64 Aligned_cols=34 Identities=18% Similarity=0.086 Sum_probs=25.6
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..| ....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2en8_A 12 SHTCDECGKNFCYISALRIHQRV-HMGE-KCSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHTT-TCCS-CSSCCSCC
T ss_pred CeECCCcCcccCCHHHHHHHHHH-hCCC-CCCCCCCC
Confidence 49999999965 45778889754 6543 56789988
No 93
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.76 E-value=0.19 Score=30.09 Aligned_cols=34 Identities=12% Similarity=0.105 Sum_probs=25.4
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..|. ...|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytd_A 12 PYKCSECGKAFHRHTHLNEHRRI-HTG-YRPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HTC-CCSSCSSCC
T ss_pred CeECCCCCCeeCChHHHHHHHHH-cCC-CCCCCCCCC
Confidence 499999998554 5678889754 654 356789988
No 94
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.75 E-value=0.3 Score=29.27 Aligned_cols=34 Identities=15% Similarity=0.030 Sum_probs=25.6
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..|. ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2elz_A 12 PYKCEDCGKGYNRRLNLDMHQRV-HMG-EKTSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHGGG-GGS-CCCCCSCCC
T ss_pred CeeCcccCchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 499999999654 5778889764 643 456789988
No 95
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.63 E-value=0.18 Score=30.21 Aligned_cols=34 Identities=12% Similarity=0.046 Sum_probs=25.8
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..|. ...|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ysp_A 12 PYKCEKCGKGYNSKFNLDMHQKV-HTG-ERPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESCHHHHHHHHTT-SCS-CCSSCCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHh-hCC-CCCCCCCCC
Confidence 599999999554 5778899865 654 356789988
No 96
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.45 E-value=0.24 Score=29.63 Aligned_cols=34 Identities=18% Similarity=0.188 Sum_probs=25.0
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..| ....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~~ 46 (46)
T 2ep3_A 12 PYRCAECGKAFTDRSNLFTHQKI-HTGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TTTS-CCCCTTCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 49999999855 45678889854 6543 56789886
No 97
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.45 E-value=0.21 Score=29.91 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=25.4
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..| ....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2en1_A 12 PFKCEECGKRFTQNSQLHSHQRV-HTGE-KPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHGGG-GSCC-CCSCCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 49999999855 45678889754 6543 66789988
No 98
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.40 E-value=0.26 Score=29.46 Aligned_cols=34 Identities=15% Similarity=0.051 Sum_probs=25.6
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..|. ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2em7_A 12 PYKCEECGKGFICRRDLYTHHMV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHGGG-GTT-CCCSSTTCC
T ss_pred CccCCCccchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999998554 5778889755 654 466789988
No 99
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=89.36 E-value=0.48 Score=33.68 Aligned_cols=40 Identities=20% Similarity=0.272 Sum_probs=28.2
Q ss_pred ccccccccCCCCCc------------chhHHHhHhhhhhccCCCcccccCcccccchhh
Q 028361 39 DDVKACFPCPFCYL------------EIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 39 ~d~~~~f~CP~C~e------------~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
.+.+.+|.||.|.+ -|+...+..|+.. +..||+|...+..
T Consensus 9 ~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 9 SDAPDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLN-------SPTDPFNRQMLTE 60 (85)
T ss_dssp TTCCTTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-------CSBCTTTCCBCCG
T ss_pred hcCchheECcccCchhcCCeECCCCCEECHHHHHHHHhc-------CCCCCCCcCCCCh
Confidence 44677899998654 4556666666653 4689999998764
No 100
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.25 E-value=0.18 Score=30.36 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=25.2
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eoo_A 12 PYGCNECGKNFGRHSHLIEHLKR-HFR-EKSSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHS-TTSSCCSCC
T ss_pred CEEccccCcccCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 49999999955 45678888765 643 356789988
No 101
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.24 E-value=0.23 Score=29.69 Aligned_cols=34 Identities=15% Similarity=0.070 Sum_probs=25.4
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emm_A 12 PHKCNECGKSFIQSAHLIQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSC-CCTTSSSCC
T ss_pred CeeCCCCChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 49999999955 45778889765 654 356789988
No 102
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=89.16 E-value=0.29 Score=29.34 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=25.5
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2el6_A 12 PYKCSQCEKSFSGKLRLLVHQRM-HTR-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHGG-GCC-SSCCSCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 49999999855 45778889755 654 356789988
No 103
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.13 E-value=0.15 Score=30.63 Aligned_cols=34 Identities=15% Similarity=0.118 Sum_probs=25.0
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..| ....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2yu8_A 12 PYKCNECGKVFTQNSHLARHRRV-HTGG-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHTHH-HHSC-CCSCSCCC
T ss_pred CeECCcCCchhCCHHHHHHHHHh-cCCC-CCCCCCCC
Confidence 49999999855 45678888754 6443 56789988
No 104
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.89 E-value=0.32 Score=29.10 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=25.3
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..|. ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eml_A 12 PYECSVCGKAFSHRQSLSVHQRI-HSG-KKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GSS-CCCSCSSCC
T ss_pred CeeCCCcCCccCCHHHHHHHHHH-hcC-CCCCCCCCC
Confidence 499999998554 5678889765 654 356789988
No 105
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.85 E-value=0.21 Score=30.05 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=25.2
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+.-| ....|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytt_A 12 PYQCSECGKSFSGSYRLTQHWIT-HTR-EKPSGPSSG 46 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTH-HHH-CCCCSCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 49999999855 55778888765 543 356789988
No 106
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=88.31 E-value=0.25 Score=29.50 Aligned_cols=35 Identities=20% Similarity=0.392 Sum_probs=26.6
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCA 80 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~ 80 (210)
.|.|+.|+..| ....|..|+.. |.- .+.-.||+|.
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~cg 45 (45)
T 2epq_A 10 PYSCPVCGLRFKRKDRMSYHVRS-HDG-SVGKSGPSSG 45 (45)
T ss_dssp SSEETTTTEECSCHHHHHHHHHH-HSC-CCCCCCCCCC
T ss_pred CCcCCCCCcccCCHHHHHHHHHH-ccC-CCCCCCcCCC
Confidence 58999999965 56778889865 654 4567899983
No 107
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.17 E-value=0.12 Score=36.94 Aligned_cols=54 Identities=9% Similarity=0.004 Sum_probs=39.5
Q ss_pred ccccccCCCCCcch---hHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhhhhc
Q 028361 41 VKACFPCPFCYLEI---EAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 41 ~~~~f~CP~C~e~~---d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~qh~ 96 (210)
.+..+.|++|+..| ....|..|+.. |.- .++-.|++|..... .++..|+...|.
T Consensus 47 ~~~~~~C~~C~~~f~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~hh~ 105 (115)
T 2dmi_A 47 DDNHETDNNNPKRWSKPRKRSLLEMEGK-EDA-QKVLKCMYCGHSFESLQDLSVHMIKTKH 105 (115)
T ss_dssp CSCCCCCCCCCSCCSSCCCCCCCCCCCS-CCC-CSSCBCSSSCCBCSSHHHHHHHHHHTTT
T ss_pred cCCCccCCCCCcccccccHHHHHHHhhc-cCC-CcceECCCCCCccCCHHHHHHHHHHhCC
Confidence 34566799999876 66788888755 543 35678999998744 488899876553
No 108
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.87 E-value=0.31 Score=29.20 Aligned_cols=34 Identities=24% Similarity=0.203 Sum_probs=24.9
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|++|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~~ 46 (46)
T 2em2_A 12 PFKCKECGKAFRQNIHLASHLRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCC-CCSSCSSCC
T ss_pred CEECCcCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 49999999855 45678888765 644 356788886
No 109
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.68 E-value=0.35 Score=28.62 Aligned_cols=34 Identities=21% Similarity=0.214 Sum_probs=25.3
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..|. ...|..|+.. |.. .+.-.|++|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 44 (44)
T 2emx_A 10 PFGCSCCEKAFSSKSYLLVHQQT-HAE-EKPSGPSSG 44 (44)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH-HTS-SCSCSCCCC
T ss_pred CccCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 499999998554 5778889765 654 356789888
No 110
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.67 E-value=0.28 Score=29.33 Aligned_cols=34 Identities=15% Similarity=0.028 Sum_probs=25.1
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emp_A 12 PYMCNECGKAFSVYSSLTTHQVI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHHHH-HHC-CSCCSCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 49999999855 45678888765 543 356789988
No 111
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=87.46 E-value=0.18 Score=37.01 Aligned_cols=46 Identities=24% Similarity=0.525 Sum_probs=29.5
Q ss_pred CccCccccCcc-ccccccCCCCCc--chhHHHhHhhhhhccCCCcccccCcccccchh
Q 028361 30 SIVDETEIDDD-VKACFPCPFCYL--EIEAHMICSHLQEEHCFEMKNAVCPLCAANLG 84 (210)
Q Consensus 30 ~~~~~~~~d~d-~~~~f~CP~C~e--~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~ 84 (210)
..++|++-|++ ....|+|| ||. .+....|... .-.+.||-|.-.|.
T Consensus 15 v~LeDm~~de~~~~y~y~Cr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I~ 63 (83)
T 1wge_A 15 VEIEDFQYDEDSETYFYPCP-CGDNFAITKEDLENG--------EDVATCPSCSLIIK 63 (83)
T ss_dssp EEGGGSCCBTTTTEEEECCS-SSSCEEEEHHHHHTT--------CCEEECTTTCCEEE
T ss_pred EEHHHceEccCCCEEEEeCC-CCCEEEECHHHHhCC--------CEEEECCCCceEEE
Confidence 34566665444 34689999 987 4555555421 12578999998753
No 112
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=87.31 E-value=0.72 Score=33.99 Aligned_cols=40 Identities=20% Similarity=0.287 Sum_probs=27.4
Q ss_pred ccccccccCCCCCc------------chhHHHhHhhhhhccCCCcccccCcccccchhh
Q 028361 39 DDVKACFPCPFCYL------------EIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 39 ~d~~~~f~CP~C~e------------~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
.+.+..|.||.|.+ .|+...+..|+.. +..||+|...+..
T Consensus 24 ~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l~~ 75 (100)
T 2kre_A 24 SDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN-------SPTDPFNRQTLTE 75 (100)
T ss_dssp SSCSTTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTTS-------CSBCSSSCCBCCT
T ss_pred ccCcHhhCCcCccCcccCCeECCCCCEEchHHHHHHHHc-------CCCCCCCCCCCCh
Confidence 45678999998765 3445555555542 4689999998764
No 113
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=87.19 E-value=0.26 Score=32.11 Aligned_cols=36 Identities=17% Similarity=0.387 Sum_probs=25.1
Q ss_pred cccCCCCCcchhHHHhHhhhhhccCCCcccccCcccccch
Q 028361 44 CFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL 83 (210)
Q Consensus 44 ~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v 83 (210)
.|.||.|+..|....-.. .-|.. .+.-.|++|....
T Consensus 14 ~~~C~~C~k~F~~~~~l~---~~H~~-~k~~~C~~C~k~f 49 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQ---LFDPM-TGTFRCTFCHTEV 49 (62)
T ss_dssp EEECSSSCCEEEHHHHHH---HEETT-TTEEBCSSSCCBC
T ss_pred CccCCCCCchhccHHHhH---hhcCC-CCCEECCCCCCcc
Confidence 599999999776544222 45654 3567999998754
No 114
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=87.01 E-value=0.72 Score=31.64 Aligned_cols=50 Identities=18% Similarity=0.432 Sum_probs=37.1
Q ss_pred ccccCCC--CCcch-hHHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhhh
Q 028361 43 ACFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQ 94 (210)
Q Consensus 43 ~~f~CP~--C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~q 94 (210)
..|.||+ |+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+...
T Consensus 44 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H 98 (100)
T 2ebt_A 44 KPYKCTWEGCDWRFARSDELTRHYRK-HTG-AKPFQCGVCNRSFSRSDHLALHMKRH 98 (100)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHHH-HTS-CCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred CCeeCCCCCCCCccCCHHHHHHHHHH-hCC-CCCeECCCCcCccCCHHHHHHHHHHh
Confidence 3599986 99855 56788999865 543 3567899999874 34899998754
No 115
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=86.75 E-value=0.3 Score=37.28 Aligned_cols=52 Identities=21% Similarity=0.384 Sum_probs=40.8
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhhhhcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHAS 97 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~qh~~ 97 (210)
.|.|++|+..| ....|..|+.. |.-+ +.-+|++|...- ..++..|+...|+.
T Consensus 50 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~C~k~F~~~~~L~~H~~~hh~~ 104 (133)
T 2lt7_A 50 KYPCRYCEKVFPLAEYRTKHEIH-HTGE-RRYQCLACGKSFINYQFMSSHIKSVHSQ 104 (133)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH-HHTC-CCEEESSSCCEESSHHHHHHHHHHHTCC
T ss_pred CeeCCccCeecccccchhhhccc-cCCC-ccccCCCCCCCcCCHHHHHHHhHHhcCC
Confidence 59999999965 46788899754 6543 567999999874 44899999988874
No 116
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=86.75 E-value=0.42 Score=33.83 Aligned_cols=48 Identities=17% Similarity=0.367 Sum_probs=20.9
Q ss_pred ccCC--CCCcch-hHHHhHhhhhhccCCCcccccCcccccch--hhhHHhhHhhh
Q 028361 45 FPCP--FCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQ 94 (210)
Q Consensus 45 f~CP--~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v--~~d~i~Hi~~q 94 (210)
|.|+ .|+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+...
T Consensus 37 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h 89 (119)
T 2jp9_A 37 YQCDFKDCERRFSRSDQLKRHQRR-HTG-VKPFQCKTCQRKFSRSDHLKTHTRTH 89 (119)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHH-HHC-CCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred ccCCCCCCcCccCCHHHHHHHHHH-cCC-CCCccCCccCchhCCHHHHHHHHHHh
Confidence 5555 255533 23445555443 221 2334455555442 22455555443
No 117
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.72 E-value=0.4 Score=28.61 Aligned_cols=34 Identities=18% Similarity=-0.008 Sum_probs=25.4
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..|. ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2yso_A 12 SHQCRECGEIFFQYVSLIEHQVL-HMG-QKNSGPSSG 46 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HSC-CSCCCTTCC
T ss_pred CEEccccChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 499999998554 5678889765 543 356789988
No 118
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.63 E-value=0.36 Score=28.93 Aligned_cols=34 Identities=15% Similarity=-0.026 Sum_probs=25.3
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+.|+..|. ...|..|+.. |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em8_A 12 PYKCVECGKGYKRRLDLDFHQRV-HTG-EKLSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HHC-CCCCCSCCC
T ss_pred CeECcccCchhCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 599999998554 5778889865 543 356789988
No 119
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=86.56 E-value=0.18 Score=37.52 Aligned_cols=45 Identities=24% Similarity=0.546 Sum_probs=29.4
Q ss_pred ccCccccCcc-ccccccCCCCCc--chhHHHhHhhhhhccCCCcccccCcccccchh
Q 028361 31 IVDETEIDDD-VKACFPCPFCYL--EIEAHMICSHLQEEHCFEMKNAVCPLCAANLG 84 (210)
Q Consensus 31 ~~~~~~~d~d-~~~~f~CP~C~e--~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~ 84 (210)
.++|++-|++ ....|+|| ||. .+....|... .-.+.||-|.-.|.
T Consensus 9 ~LeDm~~de~~~~y~ypCr-CGd~F~IteedLe~g--------e~iv~C~sCSL~Ik 56 (89)
T 2jr7_A 9 EIEDFQYDEDSETYFYPCP-CGDNFSITKEDLENG--------EDVATCPSCSLIIK 56 (89)
T ss_dssp ETTTSEEETTTTEEEEECT-TSSEEEEEHHHHHHT--------CCEEECTTTCCEEE
T ss_pred EHHHcEEcCCCCEEEEcCC-CCCEEEECHHHHhCC--------CEEEECCCCccEEE
Confidence 4566654433 34689999 997 5555556431 12578999998764
No 120
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=86.40 E-value=0.33 Score=32.33 Aligned_cols=16 Identities=25% Similarity=0.607 Sum_probs=11.8
Q ss_pred CccccccccCCCCCcc
Q 028361 38 DDDVKACFPCPFCYLE 53 (210)
Q Consensus 38 d~d~~~~f~CP~C~e~ 53 (210)
|.+..++.+|||||+.
T Consensus 17 el~~lP~IrCpyCGyr 32 (48)
T 4ayb_P 17 QLKVLPGVRCPYCGYK 32 (48)
T ss_dssp CSCCCSSSCCTTTCCS
T ss_pred HHhhCCCcccCccCcE
Confidence 3456788899999874
No 121
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=85.95 E-value=1 Score=33.07 Aligned_cols=40 Identities=20% Similarity=0.246 Sum_probs=26.6
Q ss_pred ccccccccCCCCCc-------------chhHHHhHhhhhhccCCCcccccCcccccchhh
Q 028361 39 DDVKACFPCPFCYL-------------EIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 39 ~d~~~~f~CP~C~e-------------~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
.+.+.+|.||.|.+ .|+...+..|+.. +..||+|...+..
T Consensus 17 ~~~p~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~-------~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 17 ADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS-------DQTDPFNRSPLTM 69 (98)
T ss_dssp CSCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT-------SCBCTTTCSBCCT
T ss_pred hcCcHhcCCcCccccccCCeECCCCCeEECHHHHHHHHHh-------CCCCCCCCCCCCh
Confidence 45678999998765 2444444444432 4689999998764
No 122
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=85.86 E-value=0.6 Score=32.99 Aligned_cols=51 Identities=18% Similarity=0.320 Sum_probs=38.5
Q ss_pred cccCCC--CCcch-hHHHhHhhhhhccCCCcccccCc--ccccch--hhhHHhhHhhhhc
Q 028361 44 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCP--LCAANL--GKDAAEHFMVQHA 96 (210)
Q Consensus 44 ~f~CP~--C~e~~-d~~~L~~H~~~eH~~e~~~~vCP--vC~~~v--~~d~i~Hi~~qh~ 96 (210)
.|.|++ |+..| ....|..|+.. |.. .+.-.|+ +|.... ..++..|+...++
T Consensus 6 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 63 (119)
T 2jp9_A 6 PFMCAYPGCNKRYFKLSHLQMHSRK-HTG-EKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63 (119)
T ss_dssp CBCCCSTTSCCCBSCHHHHHHHHHH-HHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHC
T ss_pred eeeCCCCCCcchhCCHHHHHHHHHh-hCC-CCCccCCCCCCcCccCCHHHHHHHHHHcCC
Confidence 599998 99955 57789999875 433 3557899 798874 4589999987554
No 123
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=85.54 E-value=0.33 Score=32.98 Aligned_cols=47 Identities=21% Similarity=0.531 Sum_probs=28.6
Q ss_pred ccccccccCCCCCcchhHHH-h-Hhh-----hhhccCCC-----cccccCcccccchhh
Q 028361 39 DDVKACFPCPFCYLEIEAHM-I-CSH-----LQEEHCFE-----MKNAVCPLCAANLGK 85 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~~d~~~-L-~~H-----~~~eH~~e-----~~~~vCPvC~~~v~~ 85 (210)
+++...+.||.|.+.|.... | |-| |-..+-.. .....||+|...+..
T Consensus 7 ~~~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 7 GNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred hhcccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 34667899999988665432 2 322 33322222 226789999998765
No 124
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=85.47 E-value=0.31 Score=31.96 Aligned_cols=34 Identities=21% Similarity=0.506 Sum_probs=20.0
Q ss_pred cccCCCCCcchhHHHhHhhhhhccCCCcccc--cCcccccc
Q 028361 44 CFPCPFCYLEIEAHMICSHLQEEHCFEMKNA--VCPLCAAN 82 (210)
Q Consensus 44 ~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~--vCPvC~~~ 82 (210)
.|.|+.|+.-+|...-- ..+++.-.- +||+|...
T Consensus 4 ~y~C~vCGyvyd~~~Gd-----~t~f~~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 4 KYVCNVCGYEYDPAEHD-----NVPFDQLPDDWCCPVCGVS 39 (46)
T ss_dssp CEEETTTCCEECGGGGT-----TCCGGGSCTTCBCTTTCCB
T ss_pred EEECCCCCeEEeCCcCC-----CcchhhCCCCCcCcCCCCc
Confidence 57788887766543111 155555443 88888764
No 125
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.35 E-value=0.19 Score=34.83 Aligned_cols=47 Identities=21% Similarity=0.494 Sum_probs=28.3
Q ss_pred cCccccccccCCCCCcchhHHHh--Hhh-----hhhccCCCcccccCcccccchhh
Q 028361 37 IDDDVKACFPCPFCYLEIEAHMI--CSH-----LQEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 37 ~d~d~~~~f~CP~C~e~~d~~~L--~~H-----~~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
.+++....+.||.|.+.|....+ |-| |-..+- .+...||+|...+..
T Consensus 8 ~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~~~ 61 (81)
T 2csy_A 8 GSEEEEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHF--RATPRCYICDQPTGG 61 (81)
T ss_dssp CSSCCCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHH--HHCSBCSSSCCBCCS
T ss_pred CcccCCCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHH--HCCCcCCCcCccccc
Confidence 34556678999999886554321 333 222111 135689999998763
No 126
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.28 E-value=0.037 Score=36.05 Aligned_cols=43 Identities=14% Similarity=0.167 Sum_probs=27.9
Q ss_pred ccccCCCCCcchhHHHhHhhhhhccCCCcccccCcccccchh--hhHHhhHhh
Q 028361 43 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLG--KDAAEHFMV 93 (210)
Q Consensus 43 ~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~--~d~i~Hi~~ 93 (210)
..|.|+.|+..|.......- .+.-.|++|..... .++..|+..
T Consensus 17 ~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~ 61 (73)
T 2ctu_A 17 RSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGN 61 (73)
T ss_dssp SEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSC
T ss_pred CCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHh
Confidence 35999999986654332221 45678999987643 366666654
No 127
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=84.02 E-value=0.51 Score=37.13 Aligned_cols=46 Identities=22% Similarity=0.432 Sum_probs=21.9
Q ss_pred cccCC--CCCcchhHHHhHhhhhhccCCCcccccCcccccchh-hhHHhhHh
Q 028361 44 CFPCP--FCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLG-KDAAEHFM 92 (210)
Q Consensus 44 ~f~CP--~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~-~d~i~Hi~ 92 (210)
.+.|| .|.+-+....|..|.. +=.| +.+.||.|...+. .++..|+.
T Consensus 82 ~v~C~n~GC~~~~~~~~l~~H~~-~C~~--~~v~C~~C~~~~~r~~l~~H~~ 130 (170)
T 3hcs_A 82 MVKCPNEGCLHKMELRHLEDHQA-HCEF--ALMDCPQCQRPFQKFHINIHIL 130 (170)
T ss_dssp EEECCSTTCCCEEEGGGHHHHHT-TCTT--SEEECTTTCCEEEGGGHHHHHH
T ss_pred ccCCCCCCCCceecHhHHHHHHh-cCCc--eeeECCCCChHHHHHHHHHHhh
Confidence 34553 3555555555555542 1111 3345666655433 25555553
No 128
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=83.88 E-value=0.76 Score=35.61 Aligned_cols=52 Identities=17% Similarity=0.314 Sum_probs=38.4
Q ss_pred ccccC--CCCCcch-hHHHhHhhhhhccCCCcccccCcc--cccchh--hhHHhhHhhhhc
Q 028361 43 ACFPC--PFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANLG--KDAAEHFMVQHA 96 (210)
Q Consensus 43 ~~f~C--P~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv--C~~~v~--~d~i~Hi~~qh~ 96 (210)
..|.| +.|+..| ....|..|+.. |.. .+.-.||+ |...-. .++..|+...+|
T Consensus 103 ~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~ 161 (190)
T 1tf6_A 103 CVYVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161 (190)
T ss_dssp SCCEECSSSSCEECSSHHHHHHHHGG-GSS-SCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred ceeeCCCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence 35899 7799844 56789999875 543 35578988 998744 489999987655
No 129
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=83.84 E-value=0.26 Score=33.69 Aligned_cols=47 Identities=19% Similarity=0.427 Sum_probs=27.7
Q ss_pred ccccccccCCCCCcchhHHH--hHhh-----hhhccCCC----cccccCcccccchhh
Q 028361 39 DDVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFE----MKNAVCPLCAANLGK 85 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~~d~~~--L~~H-----~~~eH~~e----~~~~vCPvC~~~v~~ 85 (210)
++....+.||.|.+.|.... -|-| |-..+-.. .....||+|...+..
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 14 EMIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp CCCCTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred HhCccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 34667889999988665432 2333 22211111 236789999888764
No 130
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=83.82 E-value=0.35 Score=33.01 Aligned_cols=48 Identities=25% Similarity=0.698 Sum_probs=29.9
Q ss_pred CccccccccCCCCCcchhHH-----HhHhhhhhccCCCc---ccccCcccccchhh
Q 028361 38 DDDVKACFPCPFCYLEIEAH-----MICSHLQEEHCFEM---KNAVCPLCAANLGK 85 (210)
Q Consensus 38 d~d~~~~f~CP~C~e~~d~~-----~L~~H~~~eH~~e~---~~~vCPvC~~~v~~ 85 (210)
+++....+.||.|.+.|+.. .-|-|.-=.++... ++..||+|...+..
T Consensus 9 ~~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 9 EEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTG 64 (78)
T ss_dssp CTTSSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCC
T ss_pred cccCCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCC
Confidence 34456678999998877532 13666433333321 34689999887654
No 131
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=83.69 E-value=0.29 Score=35.92 Aligned_cols=46 Identities=24% Similarity=0.524 Sum_probs=29.6
Q ss_pred CccCccccCcc-ccccccCCCCCc--chhHHHhHhhhhhccCCCcccccCcccccchh
Q 028361 30 SIVDETEIDDD-VKACFPCPFCYL--EIEAHMICSHLQEEHCFEMKNAVCPLCAANLG 84 (210)
Q Consensus 30 ~~~~~~~~d~d-~~~~f~CP~C~e--~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~ 84 (210)
..++|++-|++ ....|+|| ||. .+....|... --.+.||-|.-.|.
T Consensus 8 v~leDm~~de~~~~y~ypCr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I~ 56 (83)
T 1yop_A 8 IEIEDMTFEPENQMFTYPCP-CGDRFQIYLDDMFEG--------EKVAVCPSCSLMID 56 (83)
T ss_dssp CBGGGSEEETTTTEEEEEET-TTEEEEEEHHHHHTT--------CCEEECSSSCCEEE
T ss_pred EEHHHcEEcCCCCEEEEeCC-CCCeEEECHHHHhCC--------CEEEECCCCccEEE
Confidence 34566654444 34689999 997 5555556421 12578999998754
No 132
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=83.59 E-value=1 Score=30.50 Aligned_cols=51 Identities=20% Similarity=0.337 Sum_probs=34.9
Q ss_pred ccCCC--CCcchh-HHHhHhhhhhccCCCc-----ccccCc--ccccch--hhhHHhhHhhhh
Q 028361 45 FPCPF--CYLEIE-AHMICSHLQEEHCFEM-----KNAVCP--LCAANL--GKDAAEHFMVQH 95 (210)
Q Consensus 45 f~CP~--C~e~~d-~~~L~~H~~~eH~~e~-----~~~vCP--vC~~~v--~~d~i~Hi~~qh 95 (210)
|.|-. |++.|+ ...|..|+..+|-... .+-+|. -|.... ...|+.||+..|
T Consensus 2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 34444 777555 4569999998896543 256776 676542 348999999876
No 133
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=83.51 E-value=0.74 Score=34.39 Aligned_cols=52 Identities=17% Similarity=0.266 Sum_probs=38.4
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcc--cccch--hhhHHhhHhhhhcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFMVQHAS 97 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv--C~~~v--~~d~i~Hi~~qh~~ 97 (210)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++ |.... ..++..|+...++.
T Consensus 62 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~ 118 (155)
T 2rpc_A 62 WEECPREGKSFKAKYKLVNHIRV-HTG-EKPFPCPFPGCGKIFARSENLKIHKRTHTGE 118 (155)
T ss_dssp BTTCTTSSCCCSSHHHHHHHTHH-HHC-CCSEECSCTTTCCEESCHHHHHHHHTTTCSS
T ss_pred ccCCCCcccccCCHHHHHHHHHh-cCC-CCcccCCcCCCCCccCCHHHHHHHHHhhCCC
Confidence 38999999855 56778999876 432 35678998 98874 34889999866553
No 134
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=83.16 E-value=1.2 Score=36.57 Aligned_cols=42 Identities=14% Similarity=0.230 Sum_probs=30.2
Q ss_pred CccccccccCCCCC------------cchhHHHhHhhhhhccCCCcccccCcccccchhh
Q 028361 38 DDDVKACFPCPFCY------------LEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 38 d~d~~~~f~CP~C~------------e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
..+.+..|.||.|. .-|+...+..|+...+ ..||+|...+..
T Consensus 100 ~~~ip~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~------~tcP~t~~~l~~ 153 (179)
T 2f42_A 100 KREIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVG------HFDPVTRSPLTQ 153 (179)
T ss_dssp CCCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTC------SBCTTTCCBCCG
T ss_pred ccCCcHhhcccCccccCCCCeECCCCCEECHHHHHHHHHhCC------CCCCCCcCCCCh
Confidence 45678899999864 4567777777776521 269999998764
No 135
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.39 E-value=0.65 Score=29.56 Aligned_cols=18 Identities=11% Similarity=0.471 Sum_probs=13.2
Q ss_pred ccccccccCCCCCcchhH
Q 028361 39 DDVKACFPCPFCYLEIEA 56 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~~d~ 56 (210)
++....+.||.|.+.+..
T Consensus 10 ~~~~~~~~C~IC~~~~~~ 27 (58)
T 2ecj_A 10 ENLQVEASCSVCLEYLKE 27 (58)
T ss_dssp SCSCCCCBCSSSCCBCSS
T ss_pred hccccCCCCccCCcccCc
Confidence 346677899999886654
No 136
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.55 E-value=0.3 Score=33.38 Aligned_cols=47 Identities=21% Similarity=0.509 Sum_probs=26.8
Q ss_pred ccccccccCCCCCcchhHHH--hHhhh-----hhccCC----CcccccCcccccchhh
Q 028361 39 DDVKACFPCPFCYLEIEAHM--ICSHL-----QEEHCF----EMKNAVCPLCAANLGK 85 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~~d~~~--L~~H~-----~~eH~~----e~~~~vCPvC~~~v~~ 85 (210)
++....+.||.|.+.+.... -|-|. -..+-. ......||+|...+..
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 14 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred HHccCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 45667899999988665321 13332 111110 1235789999887764
No 137
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=81.50 E-value=0.75 Score=32.77 Aligned_cols=29 Identities=24% Similarity=0.568 Sum_probs=24.7
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMK 72 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~ 72 (210)
.|+|++|+..| ....|..|+...|+.|.+
T Consensus 56 ~~~C~~C~k~F~~~~~L~~H~~~~H~~E~R 85 (85)
T 2lv2_A 56 VFPCKYCPATFYSSPGLTRHINKCHPSENR 85 (85)
T ss_dssp SEECTTSSCEESSHHHHHHHHHTTCTTCCC
T ss_pred ccCCCCCCCEeCCHHHHHHhCcccCcCCCC
Confidence 59999999955 778899999999998754
No 138
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=81.18 E-value=0.22 Score=35.21 Aligned_cols=46 Identities=24% Similarity=0.485 Sum_probs=28.3
Q ss_pred CccccccccCCCCCcchhH-HHh--Hhh-----hhhccCCCcccccCcccccch
Q 028361 38 DDDVKACFPCPFCYLEIEA-HMI--CSH-----LQEEHCFEMKNAVCPLCAANL 83 (210)
Q Consensus 38 d~d~~~~f~CP~C~e~~d~-~~L--~~H-----~~~eH~~e~~~~vCPvC~~~v 83 (210)
.+++...+.||.|.+.|.. +.| |-| |-..+-.......||+|...+
T Consensus 7 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 7 DDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp CCCCCTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred cccCCcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 3567788999999885543 233 333 222222223446899999885
No 139
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=81.12 E-value=0.63 Score=32.90 Aligned_cols=44 Identities=20% Similarity=0.498 Sum_probs=26.9
Q ss_pred ccccccCCCCCcchhHH---Hh---Hhh-----hhhccCCCcccccCcccccchhh
Q 028361 41 VKACFPCPFCYLEIEAH---MI---CSH-----LQEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~~---~L---~~H-----~~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
...++.||.|.+.++.. .+ |-| |-... .+..+..||+|...+..
T Consensus 8 ~~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~-~~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 8 KEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRI-RTDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHH-TTSSCSBCTTTCCBCSS
T ss_pred cccCCcCCccCccCccccccccccCCCCCcCHHHHHHH-HhcCCCCCCCCCCccCC
Confidence 44568899999877543 22 443 22211 12246789999988765
No 140
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.94 E-value=1.5 Score=25.83 Aligned_cols=33 Identities=15% Similarity=0.159 Sum_probs=22.9
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|++|+..| ....|..|+.. |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRI-HTGE-NPSGPSS 45 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHHGG-GSSS-CCCSSSC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 48999999855 45678888765 6543 5567765
No 141
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.84 E-value=0.53 Score=30.91 Aligned_cols=46 Identities=20% Similarity=0.548 Sum_probs=27.3
Q ss_pred ccccccccCCCCCcchhHH---------HhHhhhhhccCCC---cccccCcccccchh
Q 028361 39 DDVKACFPCPFCYLEIEAH---------MICSHLQEEHCFE---MKNAVCPLCAANLG 84 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~~d~~---------~L~~H~~~eH~~e---~~~~vCPvC~~~v~ 84 (210)
+.....+.||.|.+.|... .-|-|.-=..+.+ .++..||+|...+.
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 10 LRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 67 (69)
T ss_dssp CCTTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCC
T ss_pred cCCCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccC
Confidence 3456678999999988754 2244421111111 12458999987764
No 142
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.53 E-value=1.4 Score=26.04 Aligned_cols=33 Identities=18% Similarity=0.134 Sum_probs=22.4
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|++|+..|. ...|..|+.. |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2yti_A 12 PYKCNECGKVFTQNSHLARHRGI-HTGE-KPSGPSS 45 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTT-TSCS-CCSSTTC
T ss_pred CeECCCCCcccCChhHHHHHhHh-cCCC-CCCCCCC
Confidence 489999998554 4667888654 6543 5566764
No 143
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.41 E-value=1.5 Score=25.98 Aligned_cols=33 Identities=18% Similarity=0.147 Sum_probs=22.4
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|++|+..| ....|..|+.. |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2enf_A 12 PYKCNECGKVFTQNSHLVRHRGI-HTGE-KPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHTT-TTTS-SCCCCSC
T ss_pred CeECCCCCcccCCHHHHHHHHHh-hCCC-CCCCCCC
Confidence 48999999855 45677888654 6543 5566764
No 144
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=80.08 E-value=1.6 Score=28.35 Aligned_cols=51 Identities=16% Similarity=0.292 Sum_probs=36.5
Q ss_pred cccccccCCC--CCcch-hHHHhHhhhhhccCCCcccccCcc--cccchh--hhHHhhHh
Q 028361 40 DVKACFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANLG--KDAAEHFM 92 (210)
Q Consensus 40 d~~~~f~CP~--C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv--C~~~v~--~d~i~Hi~ 92 (210)
.....|.|++ |+.-| ....|..|+.. |.- .+.-.|++ |..... .++..|+.
T Consensus 13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 13 SRIRSHICSHPGCGKTYFKSSHLKAHTRT-HTG-EKPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp CCCCCEECSSTTTCCEESSHHHHHHHHHH-HSS-SCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred cccCceeCCCCCCccccCCHHHHHHHHHh-cCC-CCCccCCCCCCCcccCCHHHHHhHhh
Confidence 3456799998 99955 46788899865 543 35678976 998754 37777765
No 145
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=79.89 E-value=1.1 Score=23.64 Aligned_cols=26 Identities=19% Similarity=0.489 Sum_probs=18.3
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCC
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCF 69 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~ 69 (210)
.|.|+.|+..| ....|..|+...|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~ 28 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRHAQKIHSG 28 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred CcCCcccCcccCChHHHHHHHHHHccC
Confidence 37899999866 446788886555654
No 146
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=79.78 E-value=0.94 Score=27.96 Aligned_cols=27 Identities=26% Similarity=0.401 Sum_probs=21.6
Q ss_pred cccCCCCCcc-hhHHHhHhhhhhccCCC
Q 028361 44 CFPCPFCYLE-IEAHMICSHLQEEHCFE 70 (210)
Q Consensus 44 ~f~CP~C~e~-~d~~~L~~H~~~eH~~e 70 (210)
-|.||.|-.+ -....|..|-+..|+..
T Consensus 5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~ 32 (34)
T 3mjh_B 5 GFICPQCMKSLGSADELFKHYEAVHDAG 32 (34)
T ss_dssp EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence 4999999874 45678999999999764
No 147
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.68 E-value=0.85 Score=29.79 Aligned_cols=18 Identities=17% Similarity=0.547 Sum_probs=13.6
Q ss_pred ccccccccCCCCCcchhH
Q 028361 39 DDVKACFPCPFCYLEIEA 56 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~~d~ 56 (210)
++....+.||.|.+.|..
T Consensus 15 ~~~~~~~~C~IC~~~~~~ 32 (63)
T 2ysj_A 15 NKLQEEVICPICLDILQK 32 (63)
T ss_dssp CCCCCCCBCTTTCSBCSS
T ss_pred HhCccCCCCCcCCchhCC
Confidence 456778999999886553
No 148
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=79.57 E-value=0.19 Score=33.64 Aligned_cols=48 Identities=23% Similarity=0.652 Sum_probs=26.4
Q ss_pred CccccccccCCCCCcchhH----H-HhHhhhhhccCCC---cccccCcccccchhh
Q 028361 38 DDDVKACFPCPFCYLEIEA----H-MICSHLQEEHCFE---MKNAVCPLCAANLGK 85 (210)
Q Consensus 38 d~d~~~~f~CP~C~e~~d~----~-~L~~H~~~eH~~e---~~~~vCPvC~~~v~~ 85 (210)
+++......||.|.+.|+. . .-|-|.-=.++.. .++..||+|...+..
T Consensus 8 ~~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 8 GTEEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEA 63 (69)
T ss_dssp CCSTTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCS
T ss_pred cCcCCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccC
Confidence 3445667889999876642 1 2244421111111 124569999887654
No 149
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=79.57 E-value=0.62 Score=33.03 Aligned_cols=31 Identities=13% Similarity=0.390 Sum_probs=23.5
Q ss_pred ccccccCCCCCcchhHHHhHhhhhhccCCCcccccCcccccch
Q 028361 41 VKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL 83 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v 83 (210)
...+|.|+-|+.+|++. +...+.||-|..+|
T Consensus 25 ~~v~Y~C~~CG~~~e~~------------~~d~irCp~CG~RI 55 (70)
T 1twf_L 25 ATLKYICAECSSKLSLS------------RTDAVRCKDCGHRI 55 (70)
T ss_dssp CCCCEECSSSCCEECCC------------TTSTTCCSSSCCCC
T ss_pred ceEEEECCCCCCcceeC------------CCCCccCCCCCceE
Confidence 57789999999988763 23456899998653
No 150
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.53 E-value=1.5 Score=25.83 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=22.6
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|++|+..| ....|..|+. .|..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~p~~C~~ 45 (46)
T 2yts_A 12 PYICNECGKSFIQKSHLNRHRR-IHTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGG-GTSSC-CSSCCCC
T ss_pred CEECCCCChhhCChHHHHHHHH-hcCCC-CCcCCCC
Confidence 48999999855 4567888875 46543 4566764
No 151
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.52 E-value=1.7 Score=25.70 Aligned_cols=33 Identities=18% Similarity=0.134 Sum_probs=22.8
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|+.|+..| ....|..|+.. |..+ +.-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~ 45 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQKI-HTGE-RPSGPSS 45 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TSCC-CCSCSCC
T ss_pred CEECCccCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 48999999855 45678888754 6543 5566764
No 152
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.39 E-value=1.2 Score=26.46 Aligned_cols=33 Identities=18% Similarity=0.291 Sum_probs=22.5
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|++|+..| ....|..|+.. |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-~~~~C~~ 45 (46)
T 2em3_A 12 PYECKVCSKAFTQKAHLAQHQKT-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCCC-CCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 48999999855 45667888755 6543 5566765
No 153
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=78.97 E-value=1.1 Score=23.27 Aligned_cols=21 Identities=14% Similarity=0.653 Sum_probs=13.7
Q ss_pred ccCCCCCcchh-HHHhHhhhhh
Q 028361 45 FPCPFCYLEIE-AHMICSHLQE 65 (210)
Q Consensus 45 f~CP~C~e~~d-~~~L~~H~~~ 65 (210)
|.|+.|+..|. ...|..|+..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (30)
T 1klr_A 3 YQCQYCEFRSADSSNLKTHIKT 24 (30)
T ss_dssp CCCSSSSCCCSCSHHHHHHHHH
T ss_pred ccCCCCCCccCCHHHHHHHHHH
Confidence 67888877553 4566666654
No 154
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.87 E-value=1.9 Score=25.41 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=22.5
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|+.|+..|. ...|..|+.. |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eq2_A 12 PYQCNECGKAFSQTSKLARHQRV-HTGE-KPSGPSS 45 (46)
T ss_dssp SSSCCSSCCCCSSHHHHHHHGGG-GCCC-CCCCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 489999998554 5668888754 6543 4556764
No 155
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=78.62 E-value=0.5 Score=35.10 Aligned_cols=13 Identities=38% Similarity=0.766 Sum_probs=11.2
Q ss_pred ccccCCCCCcchh
Q 028361 43 ACFPCPFCYLEIE 55 (210)
Q Consensus 43 ~~f~CP~C~e~~d 55 (210)
..|+||-|+|+|-
T Consensus 50 F~FkCP~CgEEFy 62 (95)
T 2k5c_A 50 FVFKCPVCGEEFY 62 (95)
T ss_dssp SEEECTTTCCEEE
T ss_pred HhhcCCCccHHHh
Confidence 4799999999874
No 156
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.48 E-value=2.2 Score=25.21 Aligned_cols=33 Identities=24% Similarity=0.248 Sum_probs=21.9
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|+.|+..| ....|..|+.. |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQRV-HTGE-KPSGPSS 45 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHGGG-GTTC-CCSSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHHh-cCCC-CCCCCCC
Confidence 48999998855 45667888654 5443 4556654
No 157
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=77.34 E-value=0.54 Score=37.25 Aligned_cols=30 Identities=23% Similarity=0.512 Sum_probs=22.4
Q ss_pred ccccccCCCCCcchhHHHhHhhhhhccCCCcccccCcccccch
Q 028361 41 VKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL 83 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v 83 (210)
....|.|+-|+..|+.. .....||.|...+
T Consensus 129 ~~~~y~C~~Cg~~~~~~-------------~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 129 IKWRYVCIGCGRKFSTL-------------PPGGVCPDCGSKV 158 (165)
T ss_dssp CCCCEEESSSCCEESSC-------------CGGGBCTTTCCBE
T ss_pred ccEEEECCCCCCcccCC-------------CCCCcCCCCCCcc
Confidence 34589999999988743 2335999998764
No 158
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.04 E-value=1.9 Score=25.47 Aligned_cols=33 Identities=18% Similarity=0.164 Sum_probs=22.5
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|++|+..|. ...|..|+.. |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2emi_A 12 HYECSECGKAFIQKSTLSMHQRI-HRGE-KPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG-GCSC-CCCSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHhH-hCCC-CCCCCCC
Confidence 489999998554 5678888754 6543 4556764
No 159
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.98 E-value=0.43 Score=31.65 Aligned_cols=48 Identities=25% Similarity=0.536 Sum_probs=28.2
Q ss_pred ccccccccCCCCCcchhHH--HhHhhhhhccCC----CcccccCcccccchhhh
Q 028361 39 DDVKACFPCPFCYLEIEAH--MICSHLQEEHCF----EMKNAVCPLCAANLGKD 86 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~~d~~--~L~~H~~~eH~~----e~~~~vCPvC~~~v~~d 86 (210)
+.....+.||.|.+.+... .-|-|.-=..+. ...+..||+|...+..+
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 63 (66)
T 2ecy_A 10 KTVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKD 63 (66)
T ss_dssp CSCCCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTT
T ss_pred hcCCcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChh
Confidence 3466789999998855432 223332111111 13467899999887653
No 160
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.26 E-value=2.3 Score=25.03 Aligned_cols=33 Identities=18% Similarity=0.152 Sum_probs=22.3
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|++|+..|. ...|..|+.. |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eq1_A 12 PYKCNECGKAFRAHSNLTTHQVI-HTGE-KPSGPSS 45 (46)
T ss_dssp CCCCTTTTCCCSSHHHHHHHHTT-TCCS-CCSSCCC
T ss_pred CeECCcCChhhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 489999998554 5678888754 6443 4556764
No 161
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.21 E-value=2 Score=25.30 Aligned_cols=33 Identities=21% Similarity=0.233 Sum_probs=22.3
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|++|+..| ....|..|+.. |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2ytf_A 12 PFECSECQKAFNTKSNLIVHQRT-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHT-SCSS-SSSCCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 48999999855 45678888754 5543 4556764
No 162
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=76.18 E-value=0.61 Score=31.83 Aligned_cols=45 Identities=24% Similarity=0.530 Sum_probs=25.7
Q ss_pred CccccccccCCCCCcchhHHH-h--Hhhh-----hhccCCCcccccCcccccc
Q 028361 38 DDDVKACFPCPFCYLEIEAHM-I--CSHL-----QEEHCFEMKNAVCPLCAAN 82 (210)
Q Consensus 38 d~d~~~~f~CP~C~e~~d~~~-L--~~H~-----~~eH~~e~~~~vCPvC~~~ 82 (210)
.++....+.||.|.+.|.... | |-|. -..+-.......||+|...
T Consensus 9 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 9 DDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQN 61 (74)
T ss_dssp CCCSCGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCS
T ss_pred cccCCCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCc
Confidence 346778899999988555432 2 3332 1111111223579999885
No 163
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.17 E-value=1.6 Score=29.95 Aligned_cols=48 Identities=21% Similarity=0.602 Sum_probs=27.8
Q ss_pred ccccccccCCCCCcchhH----H-Hh-Hhh-----hhhccCCC-cccccCcccccchhhh
Q 028361 39 DDVKACFPCPFCYLEIEA----H-MI-CSH-----LQEEHCFE-MKNAVCPLCAANLGKD 86 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~~d~----~-~L-~~H-----~~~eH~~e-~~~~vCPvC~~~v~~d 86 (210)
++....+.||.|.+.|+. . .| |-| |-...-.. .....||+|...+..+
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 69 (88)
T 2ct2_A 10 DALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRIT 69 (88)
T ss_dssp CCCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCS
T ss_pred hhccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccch
Confidence 345667899999987765 2 11 333 11111101 1347899999887654
No 164
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.93 E-value=2.3 Score=25.23 Aligned_cols=33 Identities=15% Similarity=0.243 Sum_probs=22.4
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|+.|+..|- ...|..|+.. |.-+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHHSV-HSGE-RPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHTTT-TTSC-CSCTTSC
T ss_pred ccCCCCCCcccCcHHHHHHHHHh-cCCC-CCCCCCC
Confidence 489999998554 4668888754 6543 4567764
No 165
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.80 E-value=2.1 Score=25.33 Aligned_cols=33 Identities=21% Similarity=0.233 Sum_probs=22.1
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|+.|+..|. ...|..|+.. |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2en9_A 12 LFKCNECKKTFTQSSSLTVHQRI-HTGE-KPSGPSS 45 (46)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-HTSS-CCCSCCC
T ss_pred CEECCccCcccCCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 489999988554 5667788654 5443 4556764
No 166
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.54 E-value=1.8 Score=25.54 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=22.0
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|++|+..| ....|..|+.. |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eow_A 12 PYKCNECGKAFRARSSLAIHQAT-HSGE-KPSGPSS 45 (46)
T ss_dssp CEECTTSCCEESSHHHHHHHHHH-HCCC-SCSCTTC
T ss_pred CeeccccCChhcCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 48899998855 45677788754 5443 4556764
No 167
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.39 E-value=2.1 Score=25.35 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=22.8
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|++|+..| ....|..|+.. |.. .+.-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2ytp_A 12 HYECSECGKAFARKSTLIMHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT-TSC-CCCCSSCC
T ss_pred CeECCcCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 48999999855 45678888754 654 35567764
No 168
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=75.32 E-value=1.8 Score=25.65 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=21.9
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|+.|+..| ....|..|+.. |..+ ++-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2emj_A 12 PFECAECGKSFSISSQLATHQRI-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH-HTTS-CSSSSCC
T ss_pred CEECCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 48899998855 44667788754 5433 4556764
No 169
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.26 E-value=1.5 Score=29.36 Aligned_cols=48 Identities=19% Similarity=0.412 Sum_probs=28.4
Q ss_pred ccccccCCCCCcchhHH-Hh-HhhhhhccCC---CcccccCcccccchhhhHH
Q 028361 41 VKACFPCPFCYLEIEAH-MI-CSHLQEEHCF---EMKNAVCPLCAANLGKDAA 88 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~~-~L-~~H~~~eH~~---e~~~~vCPvC~~~v~~d~i 88 (210)
....+.||.|.+.+... .| |-|.-=..+. -.+...||+|...+..+.+
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 64 (71)
T 2d8t_A 12 SLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFL 64 (71)
T ss_dssp SSSCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHHHH
T ss_pred CCCCCCCccCCcccCCCEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHhhc
Confidence 34568899998855432 22 4442111111 1234689999999887654
No 170
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=75.22 E-value=1.9 Score=33.53 Aligned_cols=32 Identities=31% Similarity=0.507 Sum_probs=26.8
Q ss_pred cccccCCCCCc-chhHHHhHhhhhhccCCCccc
Q 028361 42 KACFPCPFCYL-EIEAHMICSHLQEEHCFEMKN 73 (210)
Q Consensus 42 ~~~f~CP~C~e-~~d~~~L~~H~~~eH~~e~~~ 73 (210)
...+.|=||.+ -=++..+..||.+.|-|+-..
T Consensus 13 ~~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~ 45 (121)
T 1wir_A 13 RQHTPCLFCDRLFASAEETFSHCKLEHQFNIDS 45 (121)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHSSCCCHHH
T ss_pred CCceeEecCCCcccCHHHHHHHHHHhcCCCHHH
Confidence 35699999998 458999999999999997544
No 171
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=74.62 E-value=3 Score=34.34 Aligned_cols=41 Identities=17% Similarity=0.207 Sum_probs=26.3
Q ss_pred ccccccccCCCCCcc------------hhHHHhHhhhhhccCCCcccccCcccccchhh
Q 028361 39 DDVKACFPCPFCYLE------------IEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~------------~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
.+.+..|.||.|.+- |+...+..|+... ...||+|...+..
T Consensus 203 ~~~~~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~------~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 203 RDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRV------GHFNPVTRSPLTQ 255 (281)
T ss_dssp CCCCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHT------CSSCTTTCCCCCG
T ss_pred CCCCcccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHC------CCCCcCCCCCCch
Confidence 456788999988653 3444455555431 2249999998764
No 172
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.47 E-value=2.3 Score=24.97 Aligned_cols=33 Identities=15% Similarity=0.114 Sum_probs=22.1
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|++|+..| ....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2yrj_A 12 PYRCGECGKAFAQKANLTQHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT-TSS-CCSSCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-cCC-CCCCCCCC
Confidence 48999999855 45678888754 543 34556764
No 173
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=74.38 E-value=1 Score=33.14 Aligned_cols=37 Identities=22% Similarity=0.603 Sum_probs=22.2
Q ss_pred ccccccCCCCCcchhHHHhHhhhhhccCCCcccccCcccccc
Q 028361 41 VKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~ 82 (210)
+...|.||||+-+=-| ++.-+.....-.+.|-+|...
T Consensus 20 L~t~F~CPfCnh~~sV-----~vkidk~~~~g~l~C~~Cg~~ 56 (85)
T 1wii_A 20 LETQFTCPFCNHEKSC-----DVKMDRARNTGVISCTVCLEE 56 (85)
T ss_dssp CSSCCCCTTTCCSSCE-----EEEEETTTTEEEEEESSSCCE
T ss_pred CCCeEcCCCCCCCCeE-----EEEEEccCCEEEEEcccCCCe
Confidence 6689999999863111 111222233445679999875
No 174
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.37 E-value=1 Score=25.32 Aligned_cols=22 Identities=18% Similarity=0.537 Sum_probs=16.9
Q ss_pred cccCCCCCcchhH--HHhHhhhhh
Q 028361 44 CFPCPFCYLEIEA--HMICSHLQE 65 (210)
Q Consensus 44 ~f~CP~C~e~~d~--~~L~~H~~~ 65 (210)
.|.|++|+..|.. ..|..|+..
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~H~~~ 32 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQRHIWA 32 (37)
T ss_dssp CEECSSSSCEECSSCHHHHHHHHH
T ss_pred CeECCCCChhhccCHHHHHHHHHh
Confidence 4999999997766 478888643
No 175
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=74.33 E-value=0.39 Score=30.46 Aligned_cols=40 Identities=28% Similarity=0.787 Sum_probs=21.7
Q ss_pred cccCCCCCcchhH----HHh--HhhhhhccCCC---cccccCcccccch
Q 028361 44 CFPCPFCYLEIEA----HMI--CSHLQEEHCFE---MKNAVCPLCAANL 83 (210)
Q Consensus 44 ~f~CP~C~e~~d~----~~L--~~H~~~eH~~e---~~~~vCPvC~~~v 83 (210)
...||.|.++|+. ..| |.|.-=.++.. .++..||+|...+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~ 53 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTV 53 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCS
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEe
Confidence 3568888776654 222 44432112211 2356899998764
No 176
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=73.95 E-value=1.7 Score=28.68 Aligned_cols=29 Identities=31% Similarity=0.608 Sum_probs=24.1
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEM 71 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~ 71 (210)
..|.|++|+..| ....|..|+...|..+.
T Consensus 44 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~ 73 (77)
T 2ct1_A 44 AKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73 (77)
T ss_dssp SSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred CccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence 469999999965 57789999999898764
No 177
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.67 E-value=1.7 Score=25.63 Aligned_cols=33 Identities=18% Similarity=0.137 Sum_probs=21.6
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|+.|+..|. ...|..|+.. |..+ +.-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-kp~~C~~ 45 (46)
T 2eor_A 12 PYNCEECGKAFIHDSQLQEHQRI-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-HHSC-CCSSSTT
T ss_pred CccCCCCCCCcCCHHHHHHHHHh-cCCC-CCCCCCC
Confidence 488999988554 5667778654 5432 4556765
No 178
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.51 E-value=3 Score=24.59 Aligned_cols=33 Identities=24% Similarity=0.438 Sum_probs=22.4
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|+.|+..| ....|..|+. .|..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQR-VHTGE-KPSGPSS 45 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHT-TTSSS-CCCCTTC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCCC-CCCCCCC
Confidence 48999999865 4567888865 46543 4556764
No 179
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=73.22 E-value=2.7 Score=24.18 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=19.6
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 77 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCP 77 (210)
.|.|+.|+..|. ...|..|+.. |..+ +.-.||
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 42 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQRT-HAGE-SGPSSG 42 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GCCC-CSCCCC
T ss_pred CccCCCcChhhCCHHHHHHHHHh-cCCC-CCCCCC
Confidence 488888888554 4567777654 5433 344554
No 180
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.91 E-value=2.3 Score=25.18 Aligned_cols=33 Identities=15% Similarity=0.133 Sum_probs=21.8
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|++|+..|. ...|..|+.. |.- .+.-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2em4_A 12 PYECIECGKAFKTKSSLICHRRS-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSS-SSCCCCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCC
Confidence 488999988554 4667788654 543 35566764
No 181
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=71.90 E-value=2.3 Score=26.37 Aligned_cols=28 Identities=21% Similarity=0.542 Sum_probs=22.5
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEM 71 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~ 71 (210)
.|.|++|+..| ....|..|+...|.-+.
T Consensus 30 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~ 58 (60)
T 2adr_A 30 PYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58 (60)
T ss_dssp SEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred CccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence 59999999965 56789999888887653
No 182
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=71.88 E-value=0.39 Score=35.95 Aligned_cols=45 Identities=24% Similarity=0.603 Sum_probs=26.9
Q ss_pred cccccccCCCCCcchhHHH--hHhh-----hhhccCCCcccccCcccccchhh
Q 028361 40 DVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 40 d~~~~f~CP~C~e~~d~~~--L~~H-----~~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
++...+.||.|.+.|.... -|-| |-..+- ......||+|...++.
T Consensus 48 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 48 KVEETFQCICCQELVFRPITTVCQHNVCKDCLDRSF-RAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHH-HTTCCBCTTTCCBCCT
T ss_pred hCccCCCCCcCChHHcCcEEeeCCCcccHHHHHHHH-hHCcCCCCCCCccCCC
Confidence 3456789999988655322 2333 222221 1344589999988764
No 183
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.82 E-value=2.7 Score=24.84 Aligned_cols=34 Identities=21% Similarity=0.403 Sum_probs=22.5
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|+.|+..|- ...|..|+.. |.-..+.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~~C~~ 46 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHERI-HTRGVKSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHHTT-CCSCCTTSSSCC
T ss_pred CEECcCCCCcCCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence 489999998554 4678888744 654234556764
No 184
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.67 E-value=2.5 Score=24.86 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=22.2
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|++|+..|. ...|..|+.. |.- .+.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (45)
T 2epu_A 12 PFECTHCGKSFRAKGNLVTHQRI-HTG-EKSGPSSG 45 (45)
T ss_dssp SEEETTTTEEESSHHHHHHHHTT-TSS-CCCCCSCC
T ss_pred CccCCCCCCccCChHHHHHHHHH-hCC-CCCCCCCC
Confidence 489999998554 4667788654 654 34566764
No 185
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=70.51 E-value=2.2 Score=34.49 Aligned_cols=27 Identities=33% Similarity=0.807 Sum_probs=19.2
Q ss_pred cccccCCCCCcchhHHHhHhhhhhccCCCcccccCcccccc
Q 028361 42 KACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (210)
Q Consensus 42 ~~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~ 82 (210)
...|.||-||.-++- + -+.+||||...
T Consensus 136 ~~~~~C~~CG~i~~~-------------~-~p~~CP~Cg~~ 162 (170)
T 3pwf_A 136 KKVYICPICGYTAVD-------------E-APEYCPVCGAP 162 (170)
T ss_dssp SCEEECTTTCCEEES-------------C-CCSBCTTTCCB
T ss_pred CCeeEeCCCCCeeCC-------------C-CCCCCCCCCCC
Confidence 468899999985541 1 23399999864
No 186
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=70.45 E-value=2.5 Score=27.66 Aligned_cols=37 Identities=19% Similarity=0.484 Sum_probs=28.3
Q ss_pred cccCCC--CCcch-hHHHhHhhhhhccCCCcccccCcccccc
Q 028361 44 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (210)
Q Consensus 44 ~f~CP~--C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~ 82 (210)
.|.|+. |+..| ....|..|+.. |.- .+.-.|++|...
T Consensus 38 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k~ 77 (79)
T 2dlk_A 38 SFSCPEPACGKSFNFKKHLKEHMKL-HSD-TRDYICEFSGPS 77 (79)
T ss_dssp CEECSCTTTCCEESSHHHHHHHHHH-HHT-SCCCSCCSSSCC
T ss_pred CeECCCCCCcCccCCHHHHHHHHHH-hCC-CCCeeCCCCCCC
Confidence 599999 99955 56788999875 543 356799999764
No 187
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.76 E-value=3.5 Score=24.38 Aligned_cols=33 Identities=21% Similarity=0.063 Sum_probs=21.3
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|++|+..|. ...|..|+.. |..+ +.-.|.|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eom_A 12 GHRCSDCGKFFLQASNFIQHRRI-HTGE-KPSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HSSC-CCSSCCC
T ss_pred CcCCCCCCCeeCChHHHHHHHHH-hCCC-CCCCCCC
Confidence 488999988554 4677788654 5433 4455653
No 188
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.74 E-value=3.7 Score=23.97 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=21.4
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|+.|+..| ....|..|+.. |.- .+.-.|+|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 43 (43)
T 2yrm_A 10 AFFCNECDCRFSEEASLKRHTLQ-THS-DKSGPSSG 43 (43)
T ss_dssp CBCCSSSCCCBSSHHHHHHHHHH-HTC-TTCSSSCC
T ss_pred CEECCCCCCeeCChHHHHHHHHh-hCC-CCCccCCC
Confidence 48899998855 45667778754 543 24456664
No 189
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.60 E-value=2.3 Score=25.17 Aligned_cols=33 Identities=18% Similarity=0.235 Sum_probs=21.3
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|++|+..| ....|..|+.. |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~ 45 (46)
T 2eoz_A 12 PYSCNVCGKAFVLSAHLNQHLRV-HTQE-TLSGPSS 45 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHHHH-HSSC-CSSSCCC
T ss_pred CeECcccChhhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 48899998854 45667788754 5432 4456664
No 190
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.63 E-value=3.8 Score=23.64 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=19.5
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCP 77 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCP 77 (210)
.|.|++|+..| ....|..|+.. |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQRT-HTGE-SGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHHHH-TTTS-SCSCCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-hCCC-CCCCCC
Confidence 48888888854 45667777654 5433 334453
No 191
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.58 E-value=0.56 Score=31.71 Aligned_cols=45 Identities=22% Similarity=0.471 Sum_probs=28.3
Q ss_pred ccccccccCCCCCcchh-HHHh--Hhh-----hhhccCCCcccccCcccccchhh
Q 028361 39 DDVKACFPCPFCYLEIE-AHMI--CSH-----LQEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~~d-~~~L--~~H-----~~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
+++...+.||.|.+.+. ...| |-| |-..+- .....||+|...+..
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 10 SELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHF--YYSNRCPKCNIVVHQ 62 (72)
T ss_dssp CCCCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHH--HHCSSCTTTCCCCCS
T ss_pred hhcCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHH--HcCCcCCCcCcccCc
Confidence 45677899999988664 3333 444 222221 124689999988764
No 192
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=67.49 E-value=1.7 Score=32.82 Aligned_cols=31 Identities=23% Similarity=0.428 Sum_probs=23.8
Q ss_pred ccccccccCCCCCcchhHHHhHhhhhhccCCCcccc-cCcccccc
Q 028361 39 DDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNA-VCPLCAAN 82 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~-vCPvC~~~ 82 (210)
.+.+..|.|+-|+..|+.. .... .||.|...
T Consensus 68 ~~~p~~~~C~~CG~~~e~~-------------~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 68 VDEKVELECKDCSHVFKPN-------------ALDYGVCEKCHSK 99 (119)
T ss_dssp EEECCEEECSSSSCEECSC-------------CSTTCCCSSSSSC
T ss_pred EeccceEEcCCCCCEEeCC-------------CCCCCcCccccCC
Confidence 3567899999999987762 2345 89999876
No 193
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=67.42 E-value=1.2 Score=36.37 Aligned_cols=28 Identities=25% Similarity=0.532 Sum_probs=19.3
Q ss_pred cccccCCCCCcchhHHHhHhhhhhccCCCcccccCcccccc
Q 028361 42 KACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (210)
Q Consensus 42 ~~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~ 82 (210)
...+.|+.||.-+|-. + -+-+||+|...
T Consensus 153 ~~~~~C~~CG~~~~g~--------~-----~p~~CP~C~~~ 180 (191)
T 1lko_A 153 ATKWRCRNCGYVHEGT--------G-----APELCPACAHP 180 (191)
T ss_dssp EEEEEETTTCCEEEEE--------E-----CCSBCTTTCCB
T ss_pred CceEEECCCCCEeeCC--------C-----CCCCCCCCcCC
Confidence 3479999999866511 1 22399999874
No 194
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.41 E-value=2.6 Score=24.90 Aligned_cols=33 Identities=24% Similarity=0.291 Sum_probs=19.9
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCcc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCPv 78 (210)
.|.|++|+..|. ...|..|+.. |.-+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2emz_A 12 PFKCNECGKGFGRRSHLAGHLRL-HSRE-KSSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HHHT-TCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 488888888554 4567777654 4332 4445653
No 195
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=67.30 E-value=3 Score=27.72 Aligned_cols=13 Identities=31% Similarity=0.815 Sum_probs=8.2
Q ss_pred cccccccCCCCCc
Q 028361 40 DVKACFPCPFCYL 52 (210)
Q Consensus 40 d~~~~f~CP~C~e 52 (210)
|++..+.||.|+.
T Consensus 32 ~lP~dw~CP~Cg~ 44 (52)
T 1e8j_A 32 DLPDDWACPVCGA 44 (52)
T ss_dssp SSCTTCCCSSSCC
T ss_pred HCCCCCcCCCCCC
Confidence 4566667777764
No 196
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=67.26 E-value=2.5 Score=28.80 Aligned_cols=47 Identities=21% Similarity=0.564 Sum_probs=31.5
Q ss_pred ccccCC-CCCcchhHHHhHhhhhhccCCCcccccCcccccchhh-hHHhhH
Q 028361 43 ACFPCP-FCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK-DAAEHF 91 (210)
Q Consensus 43 ~~f~CP-~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~~-d~i~Hi 91 (210)
...+|| .|++.+-...|-.|+..+ -..+.+.|+-|...+.. ++-.|.
T Consensus 15 ~~v~C~~~C~~~v~r~~l~~H~~~~--C~~r~v~C~~C~~~~~~~~l~~H~ 63 (76)
T 2yuc_A 15 NVIPCPNRCPMKLSRRDLPAHLQHD--CPKRRLKCEFCGCDFSGEAYESHE 63 (76)
T ss_dssp SCCBCTTCCSCBCCSSSSTTTTTTS--CTTSCCCCSSSCCCCCHHHHHHTT
T ss_pred cccCCCccccHHhhHhHHHhhCHhh--CCCcceECCCCCCccCHHHHHHHH
Confidence 457785 788887777787877542 23456788888877544 555555
No 197
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=67.16 E-value=1.9 Score=37.87 Aligned_cols=45 Identities=22% Similarity=0.431 Sum_probs=25.4
Q ss_pred ccccccCCCCCcchhHHH---hHhhhh-----hccCCCcccccCcc--cccchhh
Q 028361 41 VKACFPCPFCYLEIEAHM---ICSHLQ-----EEHCFEMKNAVCPL--CAANLGK 85 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~~~---L~~H~~-----~eH~~e~~~~vCPv--C~~~v~~ 85 (210)
....|.||.|..-|.... -|-|.= ..+--+.....||| |...+..
T Consensus 178 ~~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 178 GKIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp SBCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred CceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 457899999987443222 233321 11111223478999 9998654
No 198
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.95 E-value=5 Score=23.10 Aligned_cols=32 Identities=16% Similarity=0.221 Sum_probs=19.8
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 77 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCP 77 (210)
.|.|++|+..|. ...|..|+.. |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2en7_A 12 PYVCNECGKAFRSKSYLIIHTRT-HTGE-SGPSSG 44 (44)
T ss_dssp SSCCTTTCCCCSSHHHHHHHHTT-TCCS-SSSCCC
T ss_pred CeECCCCCCccCCHHHHHHHhhh-cCCC-CCCCCC
Confidence 488999988554 4667778744 5433 334453
No 199
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.80 E-value=4.9 Score=23.61 Aligned_cols=32 Identities=16% Similarity=0.190 Sum_probs=20.7
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 77 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCP 77 (210)
.|.|++|+..|. ...|..|+.. |..+ +.-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2eoh_A 12 PYECKECRKTFIQIGHLNQHKRV-HTGE-RSSGPS 44 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-CSSC-CSCSTT
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 488999988554 5677788754 5432 445565
No 200
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.73 E-value=0.68 Score=31.44 Aligned_cols=44 Identities=27% Similarity=0.730 Sum_probs=26.1
Q ss_pred ccccccCCCCCcchhHH----Hh-HhhhhhccCCCc---ccccCcccccchh
Q 028361 41 VKACFPCPFCYLEIEAH----MI-CSHLQEEHCFEM---KNAVCPLCAANLG 84 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~~----~L-~~H~~~eH~~e~---~~~vCPvC~~~v~ 84 (210)
......||.|.++|+.. .| |.|.-=.++... ++..||+|...++
T Consensus 20 ~~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 20 QSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSG 71 (75)
T ss_dssp SSSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCC
T ss_pred cCCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCC
Confidence 34456899999876543 22 666422222221 3468999987765
No 201
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=66.50 E-value=0.68 Score=33.13 Aligned_cols=44 Identities=20% Similarity=0.570 Sum_probs=27.8
Q ss_pred cccccccCCCCCcchhHH-Hh--Hhhh-----hhccCCCcccccCcccccchhh
Q 028361 40 DVKACFPCPFCYLEIEAH-MI--CSHL-----QEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 40 d~~~~f~CP~C~e~~d~~-~L--~~H~-----~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
+....+.||.|.+.|... .+ |-|. -..+- .....||+|...++.
T Consensus 18 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 18 TIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFL--SYKTQCPTCCVTVTE 69 (99)
T ss_dssp HHHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHH--TTCCBCTTTCCBCCG
T ss_pred hCCCCCCcccCChhhCCcCEECCCCCHhhHHHHHHHH--HCCCCCCCCCCcCCh
Confidence 456689999998866543 33 5442 22111 134689999998875
No 202
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=65.85 E-value=3.4 Score=21.19 Aligned_cols=21 Identities=19% Similarity=0.494 Sum_probs=14.3
Q ss_pred ccCCCCCcchh-HHHhHhhhhh
Q 028361 45 FPCPFCYLEIE-AHMICSHLQE 65 (210)
Q Consensus 45 f~CP~C~e~~d-~~~L~~H~~~ 65 (210)
|.|+.|+..|. ...|..|...
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 1ard_A 3 FVCEVCTRAFARQEHLKRHYRS 24 (29)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHHH
Confidence 78888888554 4566677643
No 203
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.61 E-value=4.8 Score=23.64 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=25.0
Q ss_pred cccCC--CCCcch-hHHHhHhhhhhccCCCcccccCccc
Q 028361 44 CFPCP--FCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (210)
Q Consensus 44 ~f~CP--~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC 79 (210)
.|.|+ .|+..| ....|..|+.. |.- .+.-.|++|
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 48 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRS-HSG-VKPSGPSSG 48 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTT-SCC-CCSCSSCCC
T ss_pred CeECCCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 58997 899855 45778889765 654 356789888
No 204
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.60 E-value=1.5 Score=31.50 Aligned_cols=13 Identities=15% Similarity=0.513 Sum_probs=8.6
Q ss_pred ccccCCCCCcchh
Q 028361 43 ACFPCPFCYLEIE 55 (210)
Q Consensus 43 ~~f~CP~C~e~~d 55 (210)
..-.|.||+..|.
T Consensus 27 ~~A~Ck~C~k~ls 39 (76)
T 2djr_A 27 QYATCRLCGRQVS 39 (76)
T ss_dssp SCEEESSSCCBCC
T ss_pred CEEECCCCCCccC
Confidence 4667777776663
No 205
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=65.56 E-value=2.8 Score=21.49 Aligned_cols=21 Identities=19% Similarity=0.347 Sum_probs=13.9
Q ss_pred cccCCCCCcch-hHHHhHhhhh
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQ 64 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~ 64 (210)
.|.|+.|+..| ....|..|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLR 23 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHH
Confidence 37788888755 3556667754
No 206
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=65.39 E-value=2.2 Score=35.89 Aligned_cols=25 Identities=28% Similarity=0.348 Sum_probs=20.6
Q ss_pred cccccCCCCCcch-h-HHHhHhhhhhc
Q 028361 42 KACFPCPFCYLEI-E-AHMICSHLQEE 66 (210)
Q Consensus 42 ~~~f~CP~C~e~~-d-~~~L~~H~~~e 66 (210)
.....|+.|+++| . +..|-.|+++|
T Consensus 167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e 193 (204)
T 3sp4_A 167 QEDLKCWRCGETFGRHFTKLKAHLQEE 193 (204)
T ss_dssp GSCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred CCCceeCCCCchhhcccHHHHHHHHHH
Confidence 3478999999988 3 99999999874
No 207
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=68.84 E-value=1.3 Score=22.74 Aligned_cols=19 Identities=16% Similarity=0.485 Sum_probs=13.1
Q ss_pred ccCCCCCcchhH-HHhHhhh
Q 028361 45 FPCPFCYLEIEA-HMICSHL 63 (210)
Q Consensus 45 f~CP~C~e~~d~-~~L~~H~ 63 (210)
|.|+.|+..|.. ..|..|+
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~ 22 (26)
T 2lvu_A 3 YVCERCGKRFVQSSQLANHI 22 (26)
Confidence 788888886653 5566664
No 208
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.85 E-value=4.3 Score=23.73 Aligned_cols=32 Identities=16% Similarity=0.190 Sum_probs=20.6
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 77 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCP 77 (210)
.|.|+.|+..|- ...|..|+.. |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2eq3_A 12 PYECNQCGKAFSVRSSLTTHQAI-HTGK-KPSGPS 44 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHTT-SCCC-CCCCSC
T ss_pred CeECCCCChhhCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 488999988544 4667788754 5432 445565
No 209
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.51 E-value=5.7 Score=23.29 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=20.6
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 77 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCP 77 (210)
.|.|+.|+..|. ...|..|+.. |.-+ +.-.|+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQRV-HSGE-KPSGPS 44 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHGGG-SCCS-CCCCCC
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 488999988654 4667778654 5433 445565
No 210
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.40 E-value=2.9 Score=23.11 Aligned_cols=23 Identities=26% Similarity=0.572 Sum_probs=16.6
Q ss_pred ccccCCCCCcch-hHHHhHhhhhh
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQE 65 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~ 65 (210)
..|.|++|+..| ....|..|+..
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2els_A 8 KIFTCEYCNKVFKFKHSLQAHLRI 31 (36)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH
T ss_pred CCEECCCCCceeCCHHHHHHHHHH
Confidence 358999999865 45667777653
No 211
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=64.30 E-value=2.1 Score=30.42 Aligned_cols=17 Identities=12% Similarity=0.184 Sum_probs=13.7
Q ss_pred hhhHHhhHhhhhcchhh
Q 028361 84 GKDAAEHFMVQHASSLK 100 (210)
Q Consensus 84 ~~d~i~Hi~~qh~~~~K 100 (210)
+-+|.+|+...|...|+
T Consensus 45 TSnL~rHL~~~H~~e~~ 61 (73)
T 2ct5_A 45 TSNLSYHLEKNHPEEFC 61 (73)
T ss_dssp THHHHHHHHHSCHHHHH
T ss_pred hHhHHHHHHHHCHHHHH
Confidence 34899999988987775
No 212
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=63.84 E-value=2.8 Score=27.08 Aligned_cols=43 Identities=26% Similarity=0.535 Sum_probs=26.4
Q ss_pred cccccCCCCCcchhHHH--hHhhhhhccCCCcccccCcccccchh
Q 028361 42 KACFPCPFCYLEIEAHM--ICSHLQEEHCFEMKNAVCPLCAANLG 84 (210)
Q Consensus 42 ~~~f~CP~C~e~~d~~~--L~~H~~~eH~~e~~~~vCPvC~~~v~ 84 (210)
...+.||.|.+.|.... -|-|.-=..+.......||+|...+.
T Consensus 4 ~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWP 48 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSSSSSCSSCCSSSS
T ss_pred ccCCCceEeCCccCCeEEcCCCCcccHHHHccCCCCCCcCCcEee
Confidence 34678999988655432 24443223344445678999988764
No 213
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=63.79 E-value=4.5 Score=20.55 Aligned_cols=19 Identities=26% Similarity=0.625 Sum_probs=9.0
Q ss_pred ccCCCCCcchh-HHHhHhhh
Q 028361 45 FPCPFCYLEIE-AHMICSHL 63 (210)
Q Consensus 45 f~CP~C~e~~d-~~~L~~H~ 63 (210)
|.|+.|+..|. ...|..|.
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~ 22 (29)
T 2m0e_A 3 HKCPHCDKKFNQVGNLKAHL 22 (29)
T ss_dssp CCCSSCCCCCCTTTHHHHHH
T ss_pred CcCCCCCcccCCHHHHHHHH
Confidence 55666655442 23344443
No 214
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=63.35 E-value=4.9 Score=26.41 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=28.4
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~ 82 (210)
..|.|+.|+..| ....|..|+...|. .+...|++|...
T Consensus 46 ~~~~C~~C~~~f~~~~~L~~H~~~h~~--~~~~~~~~~~~~ 84 (86)
T 1x6h_A 46 AAFVCSKCGKTFTRRNTMARHADNCAG--PDGVEGENSGPS 84 (86)
T ss_dssp CCEECSSSCCEESCHHHHHHHHHHCCC--CCSCCCCCCCCC
T ss_pred cceECCCCCChhCCHHHHHHHHHHccC--CCCcccCCCCCC
Confidence 469999999965 66789999977544 345678888653
No 215
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=63.28 E-value=0.77 Score=36.06 Aligned_cols=45 Identities=22% Similarity=0.536 Sum_probs=27.1
Q ss_pred ccccccCCCCCcchhHHH--hHhh-----hhhccCCCcccccCcccccchhhh
Q 028361 41 VKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFEMKNAVCPLCAANLGKD 86 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~~~--L~~H-----~~~eH~~e~~~~vCPvC~~~v~~d 86 (210)
+...+.||.|.+.|.... -|-| |-..+- ......||+|...++.+
T Consensus 75 l~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 75 LEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSF-KAQVFSCPACRHDLGQN 126 (150)
T ss_dssp HHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHH-HTTCCBCTTTCCBCCTT
T ss_pred CccCCEeecCChhhcCCEEcCCCCchhHHHHHHHH-HhCCCcCCCCCccCCCC
Confidence 456799999988554321 2333 322222 12345899999988764
No 216
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=63.22 E-value=0.72 Score=29.80 Aligned_cols=43 Identities=21% Similarity=0.634 Sum_probs=25.6
Q ss_pred cccCCCCCcchhHH---------HhHhhhhhccCCC---cccccCcccccchhhh
Q 028361 44 CFPCPFCYLEIEAH---------MICSHLQEEHCFE---MKNAVCPLCAANLGKD 86 (210)
Q Consensus 44 ~f~CP~C~e~~d~~---------~L~~H~~~eH~~e---~~~~vCPvC~~~v~~d 86 (210)
.+.||.|.+.+... .-|-|.-=..+.. .++..||+|...+..+
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 57 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 57 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCcc
Confidence 57899999887653 2244431111111 1356899999887653
No 217
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=63.20 E-value=3.6 Score=25.46 Aligned_cols=25 Identities=20% Similarity=0.424 Sum_probs=21.7
Q ss_pred ccCCCCCc-chhHHHhHhhhhhccCC
Q 028361 45 FPCPFCYL-EIEAHMICSHLQEEHCF 69 (210)
Q Consensus 45 f~CP~C~e-~~d~~~L~~H~~~eH~~ 69 (210)
--|-||-. .-|+.-|..|+.+.|..
T Consensus 10 qhcrfckkkysdvknlikhire~hd~ 35 (37)
T 2elu_A 10 QHCRFCKKKYSDVKNLIKHIRDAHDP 35 (37)
T ss_dssp CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 46999987 88999999999998864
No 218
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=62.97 E-value=3 Score=30.50 Aligned_cols=44 Identities=18% Similarity=0.471 Sum_probs=27.0
Q ss_pred ccccccCCCCCcchhHH--HhHhh-----hhhccCCCcccccCcccccchhh
Q 028361 41 VKACFPCPFCYLEIEAH--MICSH-----LQEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~~--~L~~H-----~~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
....+.||.|.+.|... --|-| |-..+- ......||+|...+..
T Consensus 12 ~~~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 12 SLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTV-EKASLCCPFCRRRVSS 62 (115)
T ss_dssp CHHHHBCTTTCSBCSSCEECTTSCEECHHHHCCCC-CTTTSBCTTTCCBCHH
T ss_pred CCCCCCCccCCcccCceeEcCCCCHHhHHHHHHHH-hHCcCCCCCCCcccCc
Confidence 45579999998855432 12333 322222 2335789999998764
No 219
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.91 E-value=3.7 Score=27.33 Aligned_cols=22 Identities=18% Similarity=0.425 Sum_probs=19.2
Q ss_pred ccccCCCCCcchh-HHHhHhhhh
Q 028361 43 ACFPCPFCYLEIE-AHMICSHLQ 64 (210)
Q Consensus 43 ~~f~CP~C~e~~d-~~~L~~H~~ 64 (210)
-.|+||-|+..|. ...|..|+.
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMC 33 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhhh
Confidence 6799999999888 788999975
No 220
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=62.37 E-value=0.73 Score=33.66 Aligned_cols=13 Identities=15% Similarity=0.383 Sum_probs=9.8
Q ss_pred cccCCCCCcchhH
Q 028361 44 CFPCPFCYLEIEA 56 (210)
Q Consensus 44 ~f~CP~C~e~~d~ 56 (210)
+..||.|.++|..
T Consensus 25 ~~~C~ICl~~~~~ 37 (114)
T 1v87_A 25 EEDCIICMEKLAV 37 (114)
T ss_dssp SCEETTTTEETTS
T ss_pred CCcCccCChhhcC
Confidence 3579999887754
No 221
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=62.13 E-value=2.9 Score=26.37 Aligned_cols=23 Identities=17% Similarity=0.359 Sum_probs=19.1
Q ss_pred cccccCCCCCcchhHHHhHhhhh
Q 028361 42 KACFPCPFCYLEIEAHMICSHLQ 64 (210)
Q Consensus 42 ~~~f~CP~C~e~~d~~~L~~H~~ 64 (210)
...|.||-|++.|.+....+|.+
T Consensus 7 ~~~~~C~~C~~~i~~~~~~EH~D 29 (39)
T 2i5o_A 7 EDQVPCEKCGSLVPVWDMPEHMD 29 (39)
T ss_dssp CCEEECTTTCCEEEGGGHHHHHH
T ss_pred CCCcccccccCcCCcccccchhh
Confidence 45689999999988888888875
No 222
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.10 E-value=4.7 Score=26.42 Aligned_cols=30 Identities=23% Similarity=0.502 Sum_probs=24.0
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccCCCcc
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMK 72 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~ 72 (210)
..|.|++|+..| ....|..|+...|..+..
T Consensus 37 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~ 67 (78)
T 2d9h_A 37 LRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67 (78)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred cccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence 459999999965 567899999888887543
No 223
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=61.98 E-value=3.6 Score=21.12 Aligned_cols=21 Identities=24% Similarity=0.547 Sum_probs=14.7
Q ss_pred cccCCCCCcchh-HHHhHhhhh
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQ 64 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~ 64 (210)
.|.|+.|+..|. ...|..|+.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLR 24 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHHH
Confidence 478999988654 456677753
No 224
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=61.55 E-value=0.77 Score=32.68 Aligned_cols=44 Identities=27% Similarity=0.668 Sum_probs=25.3
Q ss_pred ccccccCCCCCcchhH----H-HhHhhhhhccCCC---cccccCcccccchh
Q 028361 41 VKACFPCPFCYLEIEA----H-MICSHLQEEHCFE---MKNAVCPLCAANLG 84 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~----~-~L~~H~~~eH~~e---~~~~vCPvC~~~v~ 84 (210)
......||.|.++|.. . .-|-|.-=.++.. .++..||+|...+.
T Consensus 37 ~~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 37 VGQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 88 (91)
T ss_dssp SSSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSS
T ss_pred cCCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCC
Confidence 3456789999876654 1 1244421111221 24568999988764
No 225
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.27 E-value=1.5 Score=29.86 Aligned_cols=43 Identities=19% Similarity=0.525 Sum_probs=25.1
Q ss_pred cccccCCCCCc-chhHHHh-Hhhh-hhccCCCcccccCcccccchhh
Q 028361 42 KACFPCPFCYL-EIEAHMI-CSHL-QEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 42 ~~~f~CP~C~e-~~d~~~L-~~H~-~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
.....|+.|.+ .-+++.| |-|+ -=..+.. +...||+|...+..
T Consensus 13 ~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~-~~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 13 ENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVK-YFQQCPMCRQFVQE 58 (68)
T ss_dssp CCSSCCSSSSSSCCCCEETTTTBCCSCTTHHH-HCSSCTTTCCCCCC
T ss_pred CCCCCCCCcCcCCCCEEEECCCChhhhHHHHh-cCCCCCCCCcchhc
Confidence 34578999987 5555443 4443 1111222 34689999987654
No 226
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.03 E-value=1.1 Score=30.15 Aligned_cols=45 Identities=22% Similarity=0.542 Sum_probs=24.5
Q ss_pred cccccccCCCCCcchhHHH-----hHhhhhhccCCC---cccccCcccccchh
Q 028361 40 DVKACFPCPFCYLEIEAHM-----ICSHLQEEHCFE---MKNAVCPLCAANLG 84 (210)
Q Consensus 40 d~~~~f~CP~C~e~~d~~~-----L~~H~~~eH~~e---~~~~vCPvC~~~v~ 84 (210)
+......||.|.++|.... -|-|.-=.++.. .++..||+|...+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 63 (74)
T ss_dssp CCCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCS
T ss_pred cCCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccc
Confidence 4455678999988764221 244421111111 12348999987654
No 227
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.90 E-value=7.8 Score=21.96 Aligned_cols=25 Identities=16% Similarity=0.397 Sum_probs=16.0
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCC
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCF 69 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~ 69 (210)
.|.|+.|+..|- ...|..|+.. |..
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~ 35 (42)
T 2yte_A 10 PYSCAECKETFSDNNRLVQHQKM-HTV 35 (42)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHH-TSC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-hCC
Confidence 478888887543 4567777654 543
No 228
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.73 E-value=5 Score=23.58 Aligned_cols=32 Identities=19% Similarity=0.225 Sum_probs=19.7
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCP 77 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCP 77 (210)
.|.|++|+..| ....|..|+.. |..+ ++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIHQQS-HTGE-RHSGPS 44 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTCC-CBTTTB
T ss_pred CEECcccCCccCCHhHHHHHHHH-cCCC-CCCCCC
Confidence 48888888855 45667777654 5432 344554
No 229
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=60.70 E-value=5.9 Score=21.82 Aligned_cols=22 Identities=23% Similarity=0.505 Sum_probs=16.0
Q ss_pred cccCCCCCcchh-HHHhHhhhhh
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQE 65 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~ 65 (210)
.|.|+.|+..|- ...|..|...
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~ 33 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHLALHRKR 33 (37)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHGG
T ss_pred CccCCCCCcccCcHHHHHHHHHH
Confidence 499999998654 4667777643
No 230
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=60.49 E-value=6.2 Score=19.88 Aligned_cols=20 Identities=15% Similarity=0.494 Sum_probs=13.6
Q ss_pred ccCCCCCcchh-HHHhHhhhh
Q 028361 45 FPCPFCYLEIE-AHMICSHLQ 64 (210)
Q Consensus 45 f~CP~C~e~~d-~~~L~~H~~ 64 (210)
|.|+.|+..|. ...|..|..
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~ 22 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQR 22 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGG
T ss_pred ccCCCCCCcCCCHHHHHHHHH
Confidence 67888887654 456667764
No 231
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=60.28 E-value=4.4 Score=20.74 Aligned_cols=22 Identities=18% Similarity=0.514 Sum_probs=16.0
Q ss_pred cccCCCCCcch-hHHHhHhhhhh
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQE 65 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~ 65 (210)
.|.|+.|+..| ....|..|+..
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~ 25 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLET 25 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 47899999865 45677788654
No 232
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=60.11 E-value=1.1 Score=29.72 Aligned_cols=44 Identities=20% Similarity=0.621 Sum_probs=25.4
Q ss_pred ccccCCCCCcchhHH--------H-hHhhhhhccCCC---cccccCcccccchhhh
Q 028361 43 ACFPCPFCYLEIEAH--------M-ICSHLQEEHCFE---MKNAVCPLCAANLGKD 86 (210)
Q Consensus 43 ~~f~CP~C~e~~d~~--------~-L~~H~~~eH~~e---~~~~vCPvC~~~v~~d 86 (210)
..+.||.|.+.+... . -|-|.-=..+.+ .....||+|...+..+
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 64 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 64 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChh
Confidence 467899999988664 1 243421111111 1235899999887643
No 233
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=59.90 E-value=4.6 Score=24.46 Aligned_cols=28 Identities=18% Similarity=0.363 Sum_probs=14.5
Q ss_pred ccCCCCCcch-hHHHhHhhhhhccCCCcc
Q 028361 45 FPCPFCYLEI-EAHMICSHLQEEHCFEMK 72 (210)
Q Consensus 45 f~CP~C~e~~-d~~~L~~H~~~eH~~e~~ 72 (210)
|.|++|+..| ....|..|+..-|.-+..
T Consensus 8 ~~C~~C~k~F~~~~~L~~H~~~~H~~e~~ 36 (48)
T 3iuf_A 8 YACDICGKRYKNRPGLSYHYAHSHLAEEE 36 (48)
T ss_dssp EECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred EECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence 6777777644 345566666534554433
No 234
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.86 E-value=4.5 Score=22.76 Aligned_cols=25 Identities=16% Similarity=0.393 Sum_probs=17.6
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccC
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHC 68 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~ 68 (210)
.|+|+.|+..|. ...|..|+...|.
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~~H~ 34 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRHVIQKHS 34 (37)
T ss_dssp EEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred CeECCCCCcccCCHHHHHHHHHHHcc
Confidence 489999999664 5677888444454
No 235
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=59.57 E-value=5.6 Score=26.96 Aligned_cols=23 Identities=26% Similarity=0.444 Sum_probs=19.8
Q ss_pred cccccCCCCCcchhHHHhHhhhh
Q 028361 42 KACFPCPFCYLEIEAHMICSHLQ 64 (210)
Q Consensus 42 ~~~f~CP~C~e~~d~~~L~~H~~ 64 (210)
....+|+||...+-...|-.|.+
T Consensus 42 ~r~v~C~~C~~~~~~~~l~~H~~ 64 (76)
T 2yuc_A 42 KRRLKCEFCGCDFSGEAYESHEG 64 (76)
T ss_dssp TSCCCCSSSCCCCCHHHHHHTTT
T ss_pred CcceECCCCCCccCHHHHHHHHh
Confidence 34689999999999999999973
No 236
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=59.54 E-value=1.9 Score=31.36 Aligned_cols=31 Identities=16% Similarity=0.388 Sum_probs=20.9
Q ss_pred cccccccCCCCCcch--hHHHhHhhhhhccCCCcccccCcccccch
Q 028361 40 DVKACFPCPFCYLEI--EAHMICSHLQEEHCFEMKNAVCPLCAANL 83 (210)
Q Consensus 40 d~~~~f~CP~C~e~~--d~~~L~~H~~~eH~~e~~~~vCPvC~~~v 83 (210)
.+...|+||||+.+. +.. .....|+-|....
T Consensus 23 ~q~~~y~Cp~CG~~~v~r~a-------------tGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 23 EMNEDHACPNCGEDRVDRQG-------------TGIWQCSYCDYKF 55 (83)
T ss_dssp HHHSCEECSSSCCEEEEEEE-------------TTEEEETTTCCEE
T ss_pred hccccCcCCCCCCcceeccC-------------CCeEECCCCCCEe
Confidence 356789999999732 221 2346799998864
No 237
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=59.27 E-value=3.8 Score=25.85 Aligned_cols=26 Identities=31% Similarity=0.844 Sum_probs=20.3
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccC
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHC 68 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~ 68 (210)
..|.||+|+..| ....|..|+...|.
T Consensus 39 ~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 39 KVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 359999999966 45778999877663
No 238
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=59.13 E-value=0.99 Score=32.60 Aligned_cols=45 Identities=24% Similarity=0.586 Sum_probs=25.2
Q ss_pred ccccccCCCCCcchhHHH--hHhh-----hhhccCCC-cccccCcccccchhh
Q 028361 41 VKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFE-MKNAVCPLCAANLGK 85 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~~~--L~~H-----~~~eH~~e-~~~~vCPvC~~~v~~ 85 (210)
....+.||.|.+.+.... -|-| |-..+-.. .....||+|...+..
T Consensus 18 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHHHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred ccCCCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 456788999987554321 2333 22211111 123589999998765
No 239
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=58.55 E-value=2 Score=30.75 Aligned_cols=15 Identities=27% Similarity=0.680 Sum_probs=12.2
Q ss_pred CccccccccCCCCCc
Q 028361 38 DDDVKACFPCPFCYL 52 (210)
Q Consensus 38 d~d~~~~f~CP~C~e 52 (210)
|..+...+.||||+.
T Consensus 21 e~~q~~ky~C~fCgk 35 (73)
T 1ffk_W 21 EIKHKKKYKCPVCGF 35 (73)
T ss_pred HHhcccCccCCCCCC
Confidence 345788999999987
No 240
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=58.04 E-value=5.4 Score=23.48 Aligned_cols=23 Identities=26% Similarity=0.517 Sum_probs=16.6
Q ss_pred ccccCCCCCc-chhHHHhHhhhhh
Q 028361 43 ACFPCPFCYL-EIEAHMICSHLQE 65 (210)
Q Consensus 43 ~~f~CP~C~e-~~d~~~L~~H~~~ 65 (210)
+.|.||-|.. -=|...|..|.+|
T Consensus 2 ~k~~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 2 SDFCCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp CCEECTTSSCEESSHHHHHHHHHH
T ss_pred CcccCccccccCcChHHHHHHHHH
Confidence 4678888876 6677777777665
No 241
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=57.97 E-value=3.4 Score=34.19 Aligned_cols=27 Identities=26% Similarity=0.571 Sum_probs=19.9
Q ss_pred cccccCCCCCcchhHHHhHhhhhhccCCCcccccCcccccc
Q 028361 42 KACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (210)
Q Consensus 42 ~~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~ 82 (210)
...+.|+.||.-+| + + .+-+||+|...
T Consensus 169 ~~~~~C~~CG~i~~--g-------~-----~p~~CP~C~~~ 195 (202)
T 1yuz_A 169 DKFHLCPICGYIHK--G-------E-----DFEKCPICFRP 195 (202)
T ss_dssp CCEEECSSSCCEEE--S-------S-----CCSBCTTTCCB
T ss_pred CcEEEECCCCCEEc--C-------c-----CCCCCCCCCCC
Confidence 36899999998666 2 1 22699999864
No 242
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=57.94 E-value=3.5 Score=29.60 Aligned_cols=29 Identities=34% Similarity=0.669 Sum_probs=21.4
Q ss_pred cccCcccccchhh-hHHhhHhhhhcchhhhhhcc
Q 028361 73 NAVCPLCAANLGK-DAAEHFMVQHASSLKRRRKC 105 (210)
Q Consensus 73 ~~vCPvC~~~v~~-d~i~Hi~~qh~~~~Krr~r~ 105 (210)
--+||-|+.+++. -+++|++ .-.||+-|.
T Consensus 30 ~NiCPYC~nRls~eGl~RHV~----~CPKR~erl 59 (77)
T 2l7x_A 30 YNICPYCASRLTSDGLARHVT----QCPKRKEKV 59 (77)
T ss_dssp TTCCTTTCCCCCTTTHHHHHT----TCSHHHHHH
T ss_pred cccChhhhccCCccchhhhcc----cCccHHHHH
Confidence 4589999999876 5889986 455666554
No 243
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=57.91 E-value=0.93 Score=32.82 Aligned_cols=45 Identities=24% Similarity=0.530 Sum_probs=27.1
Q ss_pred cccccccCCCCCcchhHHHh---Hhh-----hhhccCCCcccccCcccccchhh
Q 028361 40 DVKACFPCPFCYLEIEAHMI---CSH-----LQEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 40 d~~~~f~CP~C~e~~d~~~L---~~H-----~~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
.+...+.||.|.+.|..... |-| |-..+- ......||+|...+..
T Consensus 18 ~l~~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 18 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWL-TEQRAQCPHCRAPLQL 70 (100)
T ss_dssp HHHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHH-HHTCSBCTTTCCBCCG
T ss_pred cCCCCCCCccCCccccCccccCCCCChhhHHHHHHHH-HHCcCCCCCCCCcCCH
Confidence 45678999999886654333 333 222111 1122689999998764
No 244
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=57.79 E-value=4.5 Score=20.79 Aligned_cols=21 Identities=24% Similarity=0.524 Sum_probs=13.9
Q ss_pred ccCCCCCcchh-HHHhHhhhhh
Q 028361 45 FPCPFCYLEIE-AHMICSHLQE 65 (210)
Q Consensus 45 f~CP~C~e~~d-~~~L~~H~~~ 65 (210)
|.|+.|+..|. ...|..|+..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 1rik_A 3 FACPECPKRFMRSDHLTLHILL 24 (29)
T ss_dssp EECSSSSCEESCSHHHHHHHTG
T ss_pred ccCCCCCchhCCHHHHHHHHHH
Confidence 77888887553 4566667643
No 245
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=57.50 E-value=1.9 Score=36.21 Aligned_cols=42 Identities=19% Similarity=0.312 Sum_probs=28.6
Q ss_pred ccccccCCCCCcchhHHHhHhhhhhccC-CCcccccCcccccchhh
Q 028361 41 VKACFPCPFCYLEIEAHMICSHLQEEHC-FEMKNAVCPLCAANLGK 85 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~~~L~~H~~~eH~-~e~~~~vCPvC~~~v~~ 85 (210)
.+-.|.||.|+.++...|+.. .... ....-..||-|...+..
T Consensus 19 ~~l~l~Cp~C~~~~~F~gv~~---~~~~~~~~sg~~C~~C~~~~~~ 61 (206)
T 3flo_B 19 VTLELSCPSCDKRFPFGGIVS---SNYYRVSYNGLQCKHCEQLFTP 61 (206)
T ss_dssp CCEEEECTTTCCEEEECSSSC---CSSEEEETTEEEETTTCCBCCH
T ss_pred ceeEEECCCCCCccCCCCccc---CCCcccccccccCCCCCCcCCH
Confidence 356899999998777767653 1111 34455679999997653
No 246
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=57.31 E-value=3.8 Score=21.08 Aligned_cols=19 Identities=21% Similarity=0.634 Sum_probs=11.0
Q ss_pred ccCCCCCcchh-HHHhHhhh
Q 028361 45 FPCPFCYLEIE-AHMICSHL 63 (210)
Q Consensus 45 f~CP~C~e~~d-~~~L~~H~ 63 (210)
|.|+.|+..|. ...|..|.
T Consensus 4 ~~C~~C~k~f~~~~~l~~H~ 23 (28)
T 2kvf_A 4 YSCSVCGKRFSLKHQMETHY 23 (28)
T ss_dssp EECSSSCCEESCHHHHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHH
Confidence 66777776443 34555554
No 247
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.28 E-value=7 Score=22.49 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=19.5
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccCc
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 77 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vCP 77 (210)
.|.|+.|+..|. ...|..|+.. |.-+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQKT-HSGQ-SGPSSG 44 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHTT-SSSS-CSCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-cCCC-CCCCCC
Confidence 488999988554 4667778654 5432 334453
No 248
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.03 E-value=4.7 Score=22.03 Aligned_cols=22 Identities=23% Similarity=0.531 Sum_probs=16.2
Q ss_pred cccCCCCCcchh-HHHhHhhhhh
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQE 65 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~ 65 (210)
.|.|++|+..|. ...|..|+..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLRK 31 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHHH
Confidence 599999998665 4567777643
No 249
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=56.97 E-value=5.3 Score=21.59 Aligned_cols=22 Identities=23% Similarity=0.587 Sum_probs=15.9
Q ss_pred cccCCCCCcchh-HHHhHhhhhh
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQE 65 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~ 65 (210)
.|.|+.|+..|. ...|..|+..
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~ 29 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIRE 29 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCcchhCCHHHHHHHHHH
Confidence 489999998554 4667777654
No 250
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=56.80 E-value=3.5 Score=29.58 Aligned_cols=24 Identities=17% Similarity=0.463 Sum_probs=20.0
Q ss_pred ccccccCCCCCcchhHHHhHhhhh
Q 028361 41 VKACFPCPFCYLEIEAHMICSHLQ 64 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~~~L~~H~~ 64 (210)
+=..--||||+--+.-.||..|+.
T Consensus 27 nCs~NiCPYC~nRls~eGl~RHV~ 50 (77)
T 2l7x_A 27 NCSYNICPYCASRLTSDGLARHVT 50 (77)
T ss_dssp HHTTTCCTTTCCCCCTTTHHHHHT
T ss_pred CCCcccChhhhccCCccchhhhcc
Confidence 345668999999999999999973
No 251
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.74 E-value=8.6 Score=22.15 Aligned_cols=31 Identities=13% Similarity=0.357 Sum_probs=19.6
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCCCcccccC
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVC 76 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~e~~~~vC 76 (210)
.|.|+.|+..|. ...|..|+.. |..+ +.-.|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C 43 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQKT-HAAK-SGPSS 43 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHGGG-GCCC-CCTTC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-cCCC-CCcCC
Confidence 488999988554 5667788754 5432 33444
No 252
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.29 E-value=4.8 Score=22.14 Aligned_cols=22 Identities=18% Similarity=0.513 Sum_probs=16.4
Q ss_pred cccCCCCCcch-hHHHhHhhhhh
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQE 65 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~ 65 (210)
.|.|++|+..| ....|..|+..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elq_A 9 PFKCSLCEYATRSKSNLKAHMNR 31 (36)
T ss_dssp SEECSSSSCEESCHHHHHHHHHH
T ss_pred CccCCCCCchhCCHHHHHHHHHH
Confidence 59999999966 45677778643
No 253
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=55.43 E-value=1.7 Score=31.13 Aligned_cols=15 Identities=27% Similarity=0.585 Sum_probs=12.1
Q ss_pred ccccccccCCCCCcc
Q 028361 39 DDVKACFPCPFCYLE 53 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~ 53 (210)
..+...|.||||+.+
T Consensus 21 ~~q~~ky~C~fCgk~ 35 (72)
T 3jyw_9 21 IQQHARYDCSFCGKK 35 (72)
T ss_dssp HHHHSCBCCSSCCSS
T ss_pred HHhccCccCCCCCCc
Confidence 457789999999873
No 254
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.41 E-value=7.2 Score=22.52 Aligned_cols=24 Identities=21% Similarity=0.444 Sum_probs=15.7
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccC
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHC 68 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~ 68 (210)
.|.|+.|+..|. ...|..|+.. |.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~ 36 (44)
T 2yu5_A 12 PFKCSKCDRVFTQRNYLVQHERT-HA 36 (44)
T ss_dssp SEECSSSSCEESSSHHHHHHHHH-CC
T ss_pred CeECCCCCchhCCHHHHHHHhHh-cC
Confidence 488888887544 4567777654 44
No 255
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=55.24 E-value=6.4 Score=21.59 Aligned_cols=20 Identities=25% Similarity=0.710 Sum_probs=13.0
Q ss_pred ccCCCCCcch-hHHHhHhhhh
Q 028361 45 FPCPFCYLEI-EAHMICSHLQ 64 (210)
Q Consensus 45 f~CP~C~e~~-d~~~L~~H~~ 64 (210)
|.|+.|+..| ....|..|+.
T Consensus 3 ~~C~~C~k~F~~~~~L~~H~~ 23 (33)
T 1rim_A 3 FACPECPKRFMRSDHLSKHIT 23 (33)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH
T ss_pred ccCCCCCchhCCHHHHHHHHH
Confidence 6788887754 4456666654
No 256
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=54.52 E-value=0.84 Score=35.74 Aligned_cols=45 Identities=24% Similarity=0.579 Sum_probs=27.4
Q ss_pred cccccccCCCCCcchhHH-Hh--HhhhhhccCC----CcccccCcccccchh
Q 028361 40 DVKACFPCPFCYLEIEAH-MI--CSHLQEEHCF----EMKNAVCPLCAANLG 84 (210)
Q Consensus 40 d~~~~f~CP~C~e~~d~~-~L--~~H~~~eH~~----e~~~~vCPvC~~~v~ 84 (210)
+....+.||.|.+.|... .+ |-|.-=..|. ...+..||+|...+.
T Consensus 50 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 50 SLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 101 (165)
T ss_dssp CCHHHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred hCCCCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCC
Confidence 456789999998865543 22 4442111121 123678999999874
No 257
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=54.48 E-value=1.8 Score=31.76 Aligned_cols=16 Identities=19% Similarity=0.623 Sum_probs=12.5
Q ss_pred CccccccccCCCCCcc
Q 028361 38 DDDVKACFPCPFCYLE 53 (210)
Q Consensus 38 d~d~~~~f~CP~C~e~ 53 (210)
|..+...|.||||+.+
T Consensus 29 e~~q~~ky~CpfCGk~ 44 (83)
T 3j21_i 29 EAKMRQKHTCPVCGRK 44 (83)
T ss_dssp HHHHHSCBCCSSSCSS
T ss_pred HHHhhcccCCCCCCCc
Confidence 3457789999999874
No 258
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=54.40 E-value=2.1 Score=31.07 Aligned_cols=44 Identities=20% Similarity=0.433 Sum_probs=26.7
Q ss_pred cccccccCCCCCcchhH-HHh--Hhh-----hhhccCCCcccccCcccccchhh
Q 028361 40 DVKACFPCPFCYLEIEA-HMI--CSH-----LQEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 40 d~~~~f~CP~C~e~~d~-~~L--~~H-----~~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
++...+.||.|.+.|.. ..+ |-| |-..+-. ....||+|...+..
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 11 ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE--TSKYCPICDVQVHK 62 (108)
T ss_dssp HHGGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHT--SCSBCTTTCCBSCS
T ss_pred ccCCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHH--hCCcCcCCCccccc
Confidence 45678899999885543 333 433 2222211 23789999998764
No 259
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.34 E-value=6.9 Score=21.30 Aligned_cols=23 Identities=17% Similarity=0.251 Sum_probs=16.9
Q ss_pred ccccCCCCCcchh-HHHhHhhhhh
Q 028361 43 ACFPCPFCYLEIE-AHMICSHLQE 65 (210)
Q Consensus 43 ~~f~CP~C~e~~d-~~~L~~H~~~ 65 (210)
..|.|+.|+..|. ...|..|...
T Consensus 8 ~~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elr_A 8 KTHLCDMCGKKFKSKGTLKSHKLL 31 (36)
T ss_dssp SSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CCeecCcCCCCcCchHHHHHHHHH
Confidence 3589999998664 5667788643
No 260
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=54.25 E-value=4.2 Score=21.05 Aligned_cols=21 Identities=19% Similarity=0.578 Sum_probs=14.5
Q ss_pred cccCCCCCcchh-HHHhHhhhh
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQ 64 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~ 64 (210)
.|.|+.|+..|- ...|..|+.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMR 24 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHT
T ss_pred CcCCCCCCcccCCHHHHHHHHH
Confidence 378999988554 455777753
No 261
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=54.23 E-value=7 Score=21.20 Aligned_cols=22 Identities=23% Similarity=0.446 Sum_probs=16.2
Q ss_pred cccCCCCCcch-hHHHhHhhhhh
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQE 65 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~ 65 (210)
.|.|++|+..| ....|..|+..
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~~~ 29 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHLKV 29 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG
T ss_pred CeeCCCCCcccCCHHHHHHHHHH
Confidence 48999999866 45677778654
No 262
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.21 E-value=5 Score=22.17 Aligned_cols=22 Identities=27% Similarity=0.751 Sum_probs=16.0
Q ss_pred cccCCCCCcchh-HHHhHhhhhh
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQE 65 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~ 65 (210)
.|.|++|+..|. ...|..|+..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSHIKT 31 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHHHHH
Confidence 489999998554 4667777654
No 263
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=53.99 E-value=4.9 Score=26.67 Aligned_cols=13 Identities=31% Similarity=0.810 Sum_probs=10.6
Q ss_pred cccccccCCCCCc
Q 028361 40 DVKACFPCPFCYL 52 (210)
Q Consensus 40 d~~~~f~CP~C~e 52 (210)
|++..+.||.|+.
T Consensus 31 ~lP~dw~CP~Cg~ 43 (52)
T 1yk4_A 31 DLPDDWVCPLCGA 43 (52)
T ss_dssp GSCTTCBCTTTCC
T ss_pred HCCCCCcCCCCCC
Confidence 6778888999976
No 264
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=53.94 E-value=4.4 Score=29.47 Aligned_cols=7 Identities=43% Similarity=1.065 Sum_probs=4.1
Q ss_pred cccCCCC
Q 028361 44 CFPCPFC 50 (210)
Q Consensus 44 ~f~CP~C 50 (210)
.|.|+.|
T Consensus 27 ~y~C~vC 33 (81)
T 2kn9_A 27 LFRCIQC 33 (81)
T ss_dssp EEEETTT
T ss_pred eEEeCCC
Confidence 4566666
No 265
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=53.39 E-value=6.5 Score=25.17 Aligned_cols=26 Identities=19% Similarity=0.544 Sum_probs=20.5
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCC
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCF 69 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~ 69 (210)
.|.|++|+..| ....|..|+...|.-
T Consensus 37 ~~~C~~C~~~f~~~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 37 PFKCNYCSFDTKQPSNLSKHMKKFHGD 63 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred CEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence 49999999965 567899998876643
No 266
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.04 E-value=10 Score=21.87 Aligned_cols=24 Identities=17% Similarity=0.296 Sum_probs=16.1
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccC
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHC 68 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~ 68 (210)
.|.|+.|+..|. ...|..|+.. |.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~ 36 (44)
T 2eou_A 12 TSECQECGKIFRHSSLLIEHQAL-HA 36 (44)
T ss_dssp CCCCTTTCCCCSSHHHHHHHHHH-HT
T ss_pred CeECCCCCcccCCHHHHHHHHHH-HC
Confidence 488888888554 4567777654 43
No 267
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=52.79 E-value=2.2 Score=27.93 Aligned_cols=42 Identities=24% Similarity=0.460 Sum_probs=24.1
Q ss_pred cccCCCCCc-chhHHH------hHhh-----hhhccCCCcccccCcccccchhhh
Q 028361 44 CFPCPFCYL-EIEAHM------ICSH-----LQEEHCFEMKNAVCPLCAANLGKD 86 (210)
Q Consensus 44 ~f~CP~C~e-~~d~~~------L~~H-----~~~eH~~e~~~~vCPvC~~~v~~d 86 (210)
++.||.|.+ .+.-.. -|-| +-+..- ......||+|...+..+
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~~ 56 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLF-VRGAGNCPECGTPLRKS 56 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHH-HTTSSSCTTTCCCCSSC
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHH-HcCCCcCCCCCCccccc
Confidence 477999977 444331 2444 222221 12356799999887653
No 268
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=57.57 E-value=3 Score=21.65 Aligned_cols=21 Identities=14% Similarity=0.429 Sum_probs=14.2
Q ss_pred cccCCCCCcchh-HHHhHhhhh
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQ 64 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~ 64 (210)
.|.|++|+..|. ...|..|+.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVR 24 (30)
Confidence 378999988654 455666654
No 269
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=52.20 E-value=3 Score=37.37 Aligned_cols=34 Identities=24% Similarity=0.490 Sum_probs=23.5
Q ss_pred ccccCCCCCcchhHHHhHhhhhhccCCCcccccCccccc-chhhhHHh
Q 028361 43 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAA-NLGKDAAE 89 (210)
Q Consensus 43 ~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~-~v~~d~i~ 89 (210)
+...||||+.-|.. +-+..+||||.- .||.+.+|
T Consensus 277 ~~v~Cp~cgA~y~~-------------~~kG~lC~vC~l~~IG~~~~G 311 (320)
T 3mkr_B 277 PVEKCPLSGACYSP-------------EFKGQICKVTTVTEIGKDVIG 311 (320)
T ss_dssp CCEECTTTCCEECG-------------GGTTSBCTTTSSBBSSCCCCC
T ss_pred CCccCCCCCCeech-------------hhCCCCCCCCcCcccCCcccC
Confidence 45699999875421 235679999986 47776654
No 270
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=51.59 E-value=6.3 Score=27.72 Aligned_cols=14 Identities=36% Similarity=0.773 Sum_probs=9.6
Q ss_pred ccccccccCCCCCc
Q 028361 39 DDVKACFPCPFCYL 52 (210)
Q Consensus 39 ~d~~~~f~CP~C~e 52 (210)
+|++..+.||.|+.
T Consensus 35 ~~lPddw~CP~Cga 48 (70)
T 1dx8_A 35 VDLSDSFMCPACRS 48 (70)
T ss_dssp GGSCTTCBCTTTCC
T ss_pred hhCCCCCcCCCCCC
Confidence 34667777887765
No 271
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=51.16 E-value=3.7 Score=32.08 Aligned_cols=19 Identities=26% Similarity=0.506 Sum_probs=15.5
Q ss_pred cccccccCCCCCcchhHHH
Q 028361 40 DVKACFPCPFCYLEIEAHM 58 (210)
Q Consensus 40 d~~~~f~CP~C~e~~d~~~ 58 (210)
+.+..+.|+-|+..+....
T Consensus 66 ~~p~~~~C~~CG~~~~~~~ 84 (139)
T 3a43_A 66 EEEAVFKCRNCNYEWKLKE 84 (139)
T ss_dssp EECCEEEETTTCCEEEGGG
T ss_pred ecCCcEECCCCCCEEeccc
Confidence 5678999999998777644
No 272
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=51.10 E-value=3.3 Score=37.21 Aligned_cols=34 Identities=12% Similarity=0.148 Sum_probs=23.0
Q ss_pred cccccCCCCCcchhHHHhHhhhhhccCCCcccccCccccc-chhhhHH
Q 028361 42 KACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAA-NLGKDAA 88 (210)
Q Consensus 42 ~~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~-~v~~d~i 88 (210)
.+...||||+.-|.. +-+.-+||||.- .||.+.+
T Consensus 285 ~~~v~Cp~cgA~y~~-------------~~kG~lC~vC~l~~IG~~a~ 319 (325)
T 3mv2_A 285 TPSVSDPLTGSKYVI-------------TEKDKIDRIAMISKIGAPAS 319 (325)
T ss_dssp SCEEECTTTCCEEEG-------------GGTTSBCSSSSCBBTTCCCC
T ss_pred CCCccCCCCCCeech-------------hhCCCCCCCCcCcccCCCcc
Confidence 346789999875432 235679999976 3666554
No 273
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=50.89 E-value=1.5 Score=34.29 Aligned_cols=50 Identities=16% Similarity=0.268 Sum_probs=30.1
Q ss_pred ccCccccCc-cccccccCCCCCcchhH--HHhHhhhhhccCCCcccccCcccccchhhhHHhh
Q 028361 31 IVDETEIDD-DVKACFPCPFCYLEIEA--HMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEH 90 (210)
Q Consensus 31 ~~~~~~~d~-d~~~~f~CP~C~e~~d~--~~L~~H~~~eH~~e~~~~vCPvC~~~v~~d~i~H 90 (210)
.+++++.++ +....++|| |+..|.+ ..|- + ...+.|+-|...+-.-+..|
T Consensus 98 ~~~~m~~~e~~~~f~~~Cr-CG~~f~i~~~~l~----~-----~~~v~C~sCSl~~~v~~~~~ 150 (155)
T 2l6l_A 98 YLEEMSWNEGDHSFYLSCR-CGGKYSVSKDEAE----E-----VSLISCDTCSLIIELLHYNH 150 (155)
T ss_dssp ETTTSEEETTTTEEEEECS-SSCEEEEETTHHH----H-----CCEEECSSSSCEEEEECCCC
T ss_pred eHHHhccccCCcEEEEcCC-CCCeEEecHHHhC----C-----CCEEECCCCceEEEEEEccc
Confidence 345555432 234579999 9875443 3332 1 15788999998876544444
No 274
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.76 E-value=6.8 Score=21.50 Aligned_cols=22 Identities=14% Similarity=0.288 Sum_probs=15.7
Q ss_pred cccCCCCCcchh-HHHhHhhhhh
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQE 65 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~ 65 (210)
.|.|+.|+..|. ...|..|+..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLV 31 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCccCCHHHHHHHHHH
Confidence 589999998554 4557777643
No 275
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.34 E-value=12 Score=21.04 Aligned_cols=24 Identities=17% Similarity=0.328 Sum_probs=16.0
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccC
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHC 68 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~ 68 (210)
.|.|+.|+..|. ...|..|+.. |.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~ 34 (41)
T 2ept_A 10 VYECQECGKSFRQKGSLTLHERI-HT 34 (41)
T ss_dssp CEECSSSCCEESSHHHHHHHGGG-CC
T ss_pred CeECCCCCCCcCCHHHHHHHHHH-hC
Confidence 488888888554 4567777643 54
No 276
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=50.29 E-value=6.7 Score=26.32 Aligned_cols=13 Identities=31% Similarity=0.920 Sum_probs=7.1
Q ss_pred cccccccCCCCCc
Q 028361 40 DVKACFPCPFCYL 52 (210)
Q Consensus 40 d~~~~f~CP~C~e 52 (210)
|++..+.||-|+.
T Consensus 32 ~lP~dw~CP~Cg~ 44 (54)
T 4rxn_A 32 DIPDDWVCPLCGV 44 (54)
T ss_dssp GSCTTCBCTTTCC
T ss_pred HCCCCCcCcCCCC
Confidence 4455556666654
No 277
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=50.27 E-value=7.5 Score=21.04 Aligned_cols=23 Identities=22% Similarity=0.587 Sum_probs=15.3
Q ss_pred ccCCCCCcchhH-HHhHhhhhhccC
Q 028361 45 FPCPFCYLEIEA-HMICSHLQEEHC 68 (210)
Q Consensus 45 f~CP~C~e~~d~-~~L~~H~~~eH~ 68 (210)
|.|+.|+..|.. ..|..|+.. |.
T Consensus 3 ~~C~~C~k~f~~~~~L~~H~~~-H~ 26 (32)
T 2kfq_A 3 FACPACPKRFMRSDALSKHIKT-AF 26 (32)
T ss_dssp SSSSSSCTTHHHHHTTSSSTTS-SS
T ss_pred CCCCCCCcccCCHHHHHHHHHH-Hc
Confidence 789999886654 456667543 54
No 278
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.23 E-value=5.2 Score=23.41 Aligned_cols=22 Identities=23% Similarity=0.468 Sum_probs=13.6
Q ss_pred cccCCCCCcch-hHHHhHhhhhh
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQE 65 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~ 65 (210)
.|.|++|+..| ....|..|+..
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2en3_A 12 PFQCKECGMNFSWSCSLFKHLRS 34 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH
T ss_pred CeeCcccChhhCCHHHHHHHHHH
Confidence 37788887754 34556666543
No 279
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=49.93 E-value=2.2 Score=31.50 Aligned_cols=45 Identities=20% Similarity=0.451 Sum_probs=27.0
Q ss_pred ccccccCCCCCcch-hHHHh--HhhhhhccCCCccc-ccCcccccchhh
Q 028361 41 VKACFPCPFCYLEI-EAHMI--CSHLQEEHCFEMKN-AVCPLCAANLGK 85 (210)
Q Consensus 41 ~~~~f~CP~C~e~~-d~~~L--~~H~~~eH~~e~~~-~vCPvC~~~v~~ 85 (210)
+...+.||.|.+.| +.+.| |-|.-=..+..... ..||+|...+..
T Consensus 19 l~~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~~~ 67 (117)
T 1jm7_B 19 LEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAWI 67 (117)
T ss_dssp HHHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBCSC
T ss_pred chhCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhcCCCcCCCCcCcc
Confidence 45679999998855 33344 55432222332211 579999988753
No 280
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=49.38 E-value=18 Score=26.38 Aligned_cols=47 Identities=17% Similarity=0.468 Sum_probs=27.5
Q ss_pred ccccccccCCCCCcchhHHH--hHhhh-----hhccCCCcccccCcccccchhhh
Q 028361 39 DDVKACFPCPFCYLEIEAHM--ICSHL-----QEEHCFEMKNAVCPLCAANLGKD 86 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~~d~~~--L~~H~-----~~eH~~e~~~~vCPvC~~~v~~d 86 (210)
+.+...+.||.|.+.+.... -|-|. -... ....+..||+|...+..+
T Consensus 13 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~-~~~~~~~CP~Cr~~~~~~ 66 (118)
T 3hct_A 13 PPLESKYECPICLMALREAVQTPCGHRFCKACIIKS-IRDAGHKCPVDNEILLEN 66 (118)
T ss_dssp SCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHH-HHHHCSBCTTTCCBCCGG
T ss_pred cCCCCCCCCCcCChhhcCeEECCcCChhhHHHHHHH-HhhCCCCCCCCCCCcCHH
Confidence 45677899999988554332 23331 1111 011223899999887653
No 281
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=49.08 E-value=4.7 Score=30.08 Aligned_cols=15 Identities=20% Similarity=0.352 Sum_probs=12.1
Q ss_pred ccccccccCCCCCcc
Q 028361 39 DDVKACFPCPFCYLE 53 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~ 53 (210)
..+...|.||||+..
T Consensus 31 ~~q~~ky~CpfCgk~ 45 (92)
T 3iz5_m 31 VSQHSKYFCEFCGKF 45 (92)
T ss_dssp HHHHSCBCCTTTCSS
T ss_pred HHHhccccCcccCCC
Confidence 346788999999874
No 282
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=48.93 E-value=6.5 Score=25.51 Aligned_cols=27 Identities=26% Similarity=0.482 Sum_probs=22.7
Q ss_pred ccccCCCCCcchhHHHhHhhhhhccCCC
Q 028361 43 ACFPCPFCYLEIEAHMICSHLQEEHCFE 70 (210)
Q Consensus 43 ~~f~CP~C~e~~d~~~L~~H~~~eH~~e 70 (210)
.+-.|--|+..+-+..+.+|++. ||..
T Consensus 16 ~YRvC~~CgkPi~lsAIvdHLen-hC~~ 42 (44)
T 2lo3_A 16 QYRVCEKCGKPLALTAIVDHLEN-HCAG 42 (44)
T ss_dssp CEEECTTTCCEEETTTHHHHHHH-CCTT
T ss_pred cchhhcccCCcchHHHHHHHHHH-Hhcc
Confidence 34579999999999999999966 7754
No 283
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=48.89 E-value=4.5 Score=30.17 Aligned_cols=15 Identities=27% Similarity=0.585 Sum_probs=12.0
Q ss_pred ccccccccCCCCCcc
Q 028361 39 DDVKACFPCPFCYLE 53 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~ 53 (210)
..+...|.||||+..
T Consensus 31 ~~q~~ky~CpfCgk~ 45 (92)
T 3izc_m 31 IQQHARYDCSFCGKK 45 (92)
T ss_dssp HHHHSCCCCSSSCSS
T ss_pred HHHhcCCcCCCCCCc
Confidence 346789999999873
No 284
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=54.13 E-value=3.7 Score=21.29 Aligned_cols=20 Identities=20% Similarity=0.493 Sum_probs=13.3
Q ss_pred ccCCCCCcchh-HHHhHhhhh
Q 028361 45 FPCPFCYLEIE-AHMICSHLQ 64 (210)
Q Consensus 45 f~CP~C~e~~d-~~~L~~H~~ 64 (210)
|.|+.|+..|. ...|..|+.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2lvt_A 3 CQCVMCGKAFTQASSLIAHVR 23 (29)
Confidence 77888887654 455666654
No 285
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.16 E-value=11 Score=21.28 Aligned_cols=25 Identities=16% Similarity=0.296 Sum_probs=18.1
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCC
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCF 69 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~ 69 (210)
.|.|+.|+..|. ...|..|+.. |..
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~-H~~ 36 (42)
T 2ytb_A 11 PYRCDQCGKAFSQKGSLIVHIRV-HTG 36 (42)
T ss_dssp SBCCTTTTCCBSSHHHHHTTGGG-TSC
T ss_pred CeeCCCccchhCCHHHHHHHHHH-hCC
Confidence 599999998654 5678888754 543
No 286
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=48.14 E-value=5.4 Score=33.68 Aligned_cols=25 Identities=20% Similarity=0.389 Sum_probs=23.1
Q ss_pred ccccccCCCCCcchhHHHhHhhhhh
Q 028361 41 VKACFPCPFCYLEIEAHMICSHLQE 65 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~~~L~~H~~~ 65 (210)
.|+-|+|-.|+..+|+..|..|+..
T Consensus 151 FWQFYKCe~CgKYvDId~~~~Hlk~ 175 (226)
T 2czr_A 151 FWQFYKCEECGKYVDIENLEAHLRE 175 (226)
T ss_dssp EEEEEECTTTCCEEEGGGHHHHHHT
T ss_pred EEEEEehhhcCceecHHHHHHHHHH
Confidence 6889999999999999999999865
No 287
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=48.03 E-value=6.3 Score=29.01 Aligned_cols=13 Identities=31% Similarity=0.644 Sum_probs=7.6
Q ss_pred cccccccCCCCCc
Q 028361 40 DVKACFPCPFCYL 52 (210)
Q Consensus 40 d~~~~f~CP~C~e 52 (210)
|++..+.||.|+.
T Consensus 64 dlPddW~CPvCga 76 (87)
T 1s24_A 64 DIPDDWCCPDCGA 76 (87)
T ss_dssp GCCTTCCCSSSCC
T ss_pred HCCCCCCCCCCCC
Confidence 4555666666654
No 288
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=47.75 E-value=5.3 Score=31.79 Aligned_cols=27 Identities=37% Similarity=0.640 Sum_probs=18.2
Q ss_pred cccCCCCCcchhHHHhHhhhhhccCCCcccccCcccccc
Q 028361 44 CFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (210)
Q Consensus 44 ~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~ 82 (210)
.-+||.|..+|.- .+...-|||-|+--
T Consensus 27 lP~CP~C~seytY------------eDg~l~vCPeC~hE 53 (138)
T 2akl_A 27 LPPCPQCNSEYTY------------EDGALLVCPECAHE 53 (138)
T ss_dssp SCCCTTTCCCCCE------------ECSSSEEETTTTEE
T ss_pred CCCCCCCCCcceE------------ecCCeEECCccccc
Confidence 4689999765531 12345799999864
No 289
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=47.37 E-value=5 Score=28.35 Aligned_cols=50 Identities=20% Similarity=0.418 Sum_probs=30.9
Q ss_pred ccccCCCCCcchhHHHh-----Hhh-----hhhccCC----C--cccccCcc--cccc--hhhhHHhhHh
Q 028361 43 ACFPCPFCYLEIEAHMI-----CSH-----LQEEHCF----E--MKNAVCPL--CAAN--LGKDAAEHFM 92 (210)
Q Consensus 43 ~~f~CP~C~e~~d~~~L-----~~H-----~~~eH~~----e--~~~~vCPv--C~~~--v~~d~i~Hi~ 92 (210)
..|.||.|.+++..... |-| |-..|-- + ..+..||. |... +..+.+..+.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~~ll 73 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECMV 73 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHHHS
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHHHHC
Confidence 36789999887654321 544 2111111 1 13568999 9999 8888777654
No 290
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=46.79 E-value=6.5 Score=28.70 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=27.9
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccCCCcccccCccccc
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAA 81 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~ 81 (210)
.|.|+.|+..| ....|..|+..-|.-+ ++-.|.+|..
T Consensus 50 pf~C~~Cgk~F~~~~~L~~H~~r~Htge-kpy~C~~~~~ 87 (102)
T 2ghf_A 50 SYVCVECNFLTKRYDALSEHNLKYHPGE-ENFKLTMVKR 87 (102)
T ss_dssp CEEETTTTEEESSTHHHHTHHHHTSTTC-CCEEEEECCC
T ss_pred CcCCCCCCcccCCHHHHHHHHHHhcCCC-CCeeCCcccC
Confidence 59999999965 5677889955668764 6678888654
No 291
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=46.22 E-value=2.1 Score=31.93 Aligned_cols=39 Identities=15% Similarity=0.299 Sum_probs=19.5
Q ss_pred cCCCCCcchhHHHhHh----hhhhccCCCc-ccccCcccccchh
Q 028361 46 PCPFCYLEIEAHMICS----HLQEEHCFEM-KNAVCPLCAANLG 84 (210)
Q Consensus 46 ~CP~C~e~~d~~~L~~----H~~~eH~~e~-~~~vCPvC~~~v~ 84 (210)
.||+|+.+.-+..-.. +-...-.++. ...+|+.|...+.
T Consensus 4 ~Cp~Cg~~~~~~~~~~~~~~~kg~~~~v~~v~~~~C~~CGE~~~ 47 (133)
T 3o9x_A 4 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIM 47 (133)
T ss_dssp BCTTTSSSBEEEEEEEEEEEETTEEEEEEEEEEEEESSSSCEEC
T ss_pred CCCcCCCCceeeceEEEEEEECCEEEEECCCceeECCCCCCEee
Confidence 7999987521221111 1111112222 3457999998743
No 292
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=46.20 E-value=2.8 Score=28.67 Aligned_cols=45 Identities=22% Similarity=0.521 Sum_probs=24.8
Q ss_pred cccccccCCCCCcch-hHHHh-Hhhh-hhccCCCcccccCcccccchhh
Q 028361 40 DVKACFPCPFCYLEI-EAHMI-CSHL-QEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 40 d~~~~f~CP~C~e~~-d~~~L-~~H~-~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
+....+.||.|.+.+ +...| |-|. -=..+... -..||+|...+..
T Consensus 20 ~~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~-~~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 20 RLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEA-VDKCPMCYTVITF 67 (74)
T ss_dssp HHHHHTBCTTTSSSBCCEEEETTCCBCCCHHHHTT-CSBCTTTCCBCSE
T ss_pred cCccCCCCCCCCCCCCCEEEcCCCChhHHHHhhhc-CccCCCcCcCccC
Confidence 345678999998844 33332 3332 00011111 1789999987653
No 293
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=46.09 E-value=14 Score=20.78 Aligned_cols=22 Identities=14% Similarity=0.309 Sum_probs=14.2
Q ss_pred cccCCCCCcch-hHHHhHhhhhh
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQE 65 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~ 65 (210)
.|.|+.|+..| ....|..|+..
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~ 33 (42)
T 2epc_A 11 PYLCGQCGKSFTQRGSLAVHQRS 33 (42)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHhhh
Confidence 47888888755 44566677543
No 294
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=45.79 E-value=3.1 Score=30.44 Aligned_cols=47 Identities=15% Similarity=0.325 Sum_probs=27.4
Q ss_pred ccccccccCCCCCcchhHHH--hHhh-----hhhccCCCcccccCcccccchhhh
Q 028361 39 DDVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFEMKNAVCPLCAANLGKD 86 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~~d~~~--L~~H-----~~~eH~~e~~~~vCPvC~~~v~~d 86 (210)
+++...+.||.|.+.+.... -|-| |-..+- ......||+|...+..+
T Consensus 18 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~~ 71 (116)
T 1rmd_A 18 AHFVKSISCQICEHILADPVETSCKHLFCRICILRCL-KVMGSYCPSCRYPCFPT 71 (116)
T ss_dssp HHHHHHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHH-HHTCSBCTTTCCBCCGG
T ss_pred HhccCCCCCCCCCcHhcCcEEcCCCCcccHHHHHHHH-hHCcCcCCCCCCCCCHh
Confidence 45667899999988654332 1222 111111 11245899999987753
No 295
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=45.40 E-value=7.9 Score=28.37 Aligned_cols=12 Identities=33% Similarity=0.686 Sum_probs=9.3
Q ss_pred ccCCCCCcchhH
Q 028361 45 FPCPFCYLEIEA 56 (210)
Q Consensus 45 f~CP~C~e~~d~ 56 (210)
-+||.|+..++.
T Consensus 48 ~~CPvCgs~l~~ 59 (112)
T 1l8d_A 48 GKCPVCGRELTD 59 (112)
T ss_dssp EECTTTCCEECH
T ss_pred CCCCCCCCcCCH
Confidence 379999987764
No 296
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=45.16 E-value=2.9 Score=31.69 Aligned_cols=39 Identities=23% Similarity=0.430 Sum_probs=25.7
Q ss_pred ccCCCCCcchhHHHhHhhhhhccCCCcccccCcccccch
Q 028361 45 FPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL 83 (210)
Q Consensus 45 f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v 83 (210)
-.||-|..+++..+---||+.=+..=.+.+.||-|...+
T Consensus 33 ~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~CPdC~q~L 71 (101)
T 2jne_A 33 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPL 71 (101)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSBC
T ss_pred ccCccCCCcceecCCEEECccccchhhccccCcchhhHH
Confidence 678888877766554334444333345668899999875
No 297
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=43.92 E-value=10 Score=21.29 Aligned_cols=24 Identities=29% Similarity=0.718 Sum_probs=16.9
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccC
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHC 68 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~ 68 (210)
.|.|+.|+..| ....|..|+.. |.
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~~~-H~ 30 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHMNV-HR 30 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHHHT-TC
T ss_pred ceECCCCCcccCCHHHHHHHHHH-cC
Confidence 48999999865 44667778654 44
No 298
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.65 E-value=9.8 Score=21.58 Aligned_cols=24 Identities=17% Similarity=0.394 Sum_probs=17.4
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccC
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHC 68 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~ 68 (210)
.|.|++|+..| ....|..|+.. |.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~-H~ 35 (42)
T 2en2_A 11 PYKCETCGARFVQVAHLRAHVLI-HT 35 (42)
T ss_dssp SEECTTTCCEESSHHHHHHHTHH-HH
T ss_pred CEeCCCcChhhCCHHHHHHHHHH-cC
Confidence 49999999965 45677888753 43
No 299
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=43.65 E-value=5.6 Score=26.71 Aligned_cols=39 Identities=15% Similarity=0.349 Sum_probs=26.4
Q ss_pred ccccccCCCCCc-chhHHHhHhhhhhccCCCcccccCcccccchhhhHHhh
Q 028361 41 VKACFPCPFCYL-EIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEH 90 (210)
Q Consensus 41 ~~~~f~CP~C~e-~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~~d~i~H 90 (210)
+.....||.|+. ++.. -++....||..|..-+.++.|.+
T Consensus 8 ll~~~~Cp~C~~~~lv~-----------D~~~ge~vC~~CGlVl~e~~iD~ 47 (58)
T 1dl6_A 8 ALPRVTCPNHPDAILVE-----------DYRAGDMICPECGLVVGDRVIDV 47 (58)
T ss_dssp CCSCCSBTTBSSSCCEE-----------CSSSCCEECTTTCCEECCSCCCC
T ss_pred ccccccCcCCCCCceeE-----------eCCCCeEEeCCCCCEEecccccc
Confidence 344558999975 4311 23556799999988888776643
No 300
>2qgp_A HNH endonuclease; Q39X46, GMR87, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 2.60A {Geobacter metallireducens gs-15}
Probab=43.41 E-value=2.8 Score=31.50 Aligned_cols=43 Identities=19% Similarity=0.172 Sum_probs=24.5
Q ss_pred cccccCCCCCcchhHHH-hHhhhhhcc---CCCccc--ccCcccccchh
Q 028361 42 KACFPCPFCYLEIEAHM-ICSHLQEEH---CFEMKN--AVCPLCAANLG 84 (210)
Q Consensus 42 ~~~f~CP~C~e~~d~~~-L~~H~~~eH---~~e~~~--~vCPvC~~~v~ 84 (210)
+..+.|+||+..++... -.+|+.--- ..+..| .+|+.|...-+
T Consensus 33 r~~~~C~yCg~~~~~~~~~vDHIiP~s~gG~~~~~Nl~~lC~~CN~~K~ 81 (112)
T 2qgp_A 33 IARGICHYCGEIFPPEELTMDHLVPVVRGGKSTRGNVVPACKECNNRKK 81 (112)
T ss_dssp HHHTBCTTTCCBCCGGGEEEEESSCTTTTCCCSTTTEEEEEHHHHHHHH
T ss_pred HcCCcCCCCCCcCCCCCcEEEEEeehhcCCCCChhhChhhCHHHHHHHc
Confidence 35689999999775432 245553210 112233 66888876544
No 301
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.34 E-value=12 Score=21.22 Aligned_cols=25 Identities=28% Similarity=0.538 Sum_probs=18.1
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCC
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCF 69 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~ 69 (210)
.|.|+.|+..|. ...|..|+.. |.-
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~-H~~ 36 (42)
T 2eos_A 11 PYPCEICGTRFRHLQTLKSHLRI-HTG 36 (42)
T ss_dssp CBCCSSSCCCBSSHHHHHHHTTT-TSC
T ss_pred CEECCCCCCccCCHHHHHHHHHh-cCC
Confidence 599999999665 4667888754 543
No 302
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=42.87 E-value=4.5 Score=25.85 Aligned_cols=34 Identities=24% Similarity=0.353 Sum_probs=22.5
Q ss_pred cccCCCCCc-chhHHHhHhhhhhccCCCcccccCcccccchhhhHH
Q 028361 44 CFPCPFCYL-EIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAA 88 (210)
Q Consensus 44 ~f~CP~C~e-~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~~d~i 88 (210)
.++||.|+. ++.. ..+....||+.|..-+..+.|
T Consensus 5 ~~~CP~C~~~~l~~-----------d~~~gelvC~~CG~v~~e~~i 39 (50)
T 1pft_A 5 QKVCPACESAELIY-----------DPERGEIVCAKCGYVIEENII 39 (50)
T ss_dssp CCSCTTTSCCCEEE-----------ETTTTEEEESSSCCBCCCCCC
T ss_pred cEeCcCCCCcceEE-----------cCCCCeEECcccCCccccccc
Confidence 578999976 4321 123456899999887766655
No 303
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=42.83 E-value=5.8 Score=30.19 Aligned_cols=15 Identities=33% Similarity=0.623 Sum_probs=12.0
Q ss_pred ccccccccCCCCCcc
Q 028361 39 DDVKACFPCPFCYLE 53 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~ 53 (210)
..+...|.||||+..
T Consensus 31 ~~q~aky~CpfCgk~ 45 (103)
T 4a17_Y 31 ITQHAKYGCPFCGKV 45 (103)
T ss_dssp HHHHSCEECTTTCCE
T ss_pred HHhhcCCCCCCCCCc
Confidence 346789999999873
No 304
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=41.87 E-value=2.5 Score=28.13 Aligned_cols=41 Identities=24% Similarity=0.658 Sum_probs=23.3
Q ss_pred cccccCCCCCcc-hhHHHh---Hhhh------hhccCCCcccccCcccccchh
Q 028361 42 KACFPCPFCYLE-IEAHMI---CSHL------QEEHCFEMKNAVCPLCAANLG 84 (210)
Q Consensus 42 ~~~f~CP~C~e~-~d~~~L---~~H~------~~eH~~e~~~~vCPvC~~~v~ 84 (210)
.....|+.|.+. .|...+ |-|+ ... ...++..||+|...+.
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~--~~~~~~~CPiCR~~i~ 55 (63)
T 2vje_B 5 NLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARR--LKKAGASCPICKKEIQ 55 (63)
T ss_dssp GGGSBCTTTSSSBSCEEEEETTEEEEEECHHHHHH--HHHTTCBCTTTCCBCC
T ss_pred CcCCCCcccCCcCCCeEEEecCCCCHhHHHHHHHH--HHHhCCcCCCcCchhh
Confidence 345679999874 344333 4443 221 1123458999988764
No 305
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=41.53 E-value=9.5 Score=25.49 Aligned_cols=14 Identities=36% Similarity=0.828 Sum_probs=11.8
Q ss_pred ccccccccCCCCCc
Q 028361 39 DDVKACFPCPFCYL 52 (210)
Q Consensus 39 ~d~~~~f~CP~C~e 52 (210)
+|++..+.||.|+.
T Consensus 31 ~~lP~dw~CP~Cga 44 (55)
T 2v3b_B 31 EDIPADWVCPDCGV 44 (55)
T ss_dssp GGSCTTCCCTTTCC
T ss_pred hHCCCCCcCCCCCC
Confidence 35788999999986
No 306
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=40.43 E-value=3 Score=31.76 Aligned_cols=44 Identities=18% Similarity=0.524 Sum_probs=24.5
Q ss_pred ccccccCCCCCcchhH-HHh-HhhhhhccCC---CcccccCcccccchh
Q 028361 41 VKACFPCPFCYLEIEA-HMI-CSHLQEEHCF---EMKNAVCPLCAANLG 84 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~-~~L-~~H~~~eH~~---e~~~~vCPvC~~~v~ 84 (210)
+..++.||.|.+.|.. +.| |-|.-=..+. -.+...||+|...+.
T Consensus 50 ~~~~~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 98 (138)
T 4ayc_A 50 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIK 98 (138)
T ss_dssp HHHHSBCTTTCSBCSSEEEETTSCEEEHHHHHHHTTTCSBCTTTCCBCC
T ss_pred ccccCCCcccCcccCCceECCCCCCccHHHHHHHHHcCCcCCCCCCcCC
Confidence 3446789999885443 333 3332111111 124567999998764
No 307
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.23 E-value=21 Score=20.51 Aligned_cols=22 Identities=14% Similarity=0.271 Sum_probs=13.7
Q ss_pred cccCCCCCcch-hHHHhHhhhhh
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQE 65 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~ 65 (210)
.|.|+.|+..| ....|..|+..
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHERT 34 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG
T ss_pred CeECCCCCcccCchHHHHHHHhH
Confidence 47777777754 34566666543
No 308
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.97 E-value=12 Score=25.83 Aligned_cols=26 Identities=19% Similarity=0.400 Sum_probs=20.5
Q ss_pred ccccCCCCCcch-hHHHhHhhhhhccC
Q 028361 43 ACFPCPFCYLEI-EAHMICSHLQEEHC 68 (210)
Q Consensus 43 ~~f~CP~C~e~~-d~~~L~~H~~~eH~ 68 (210)
..|.|++|+..| ....|..|+...|.
T Consensus 53 ~~~~C~~C~k~F~~~~~L~~H~~~h~~ 79 (98)
T 2gqj_A 53 DALKCQHCRKQFKSKAGLNYHTMAEHS 79 (98)
T ss_dssp HHHSCSSSCCCCSCHHHHHHHHHHHSC
T ss_pred CCEECCCCCCccCCHHHHHHHHHHHcC
Confidence 369999999966 46789999877664
No 309
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.82 E-value=2.6 Score=27.84 Aligned_cols=43 Identities=16% Similarity=0.479 Sum_probs=25.9
Q ss_pred cccccccCCCCCcchhHHHh-Hhhh-----hhccCCCcccccCcccccchh
Q 028361 40 DVKACFPCPFCYLEIEAHMI-CSHL-----QEEHCFEMKNAVCPLCAANLG 84 (210)
Q Consensus 40 d~~~~f~CP~C~e~~d~~~L-~~H~-----~~eH~~e~~~~vCPvC~~~v~ 84 (210)
+....+.||.|.+.+....| |-|. -... -.+...||+|...+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~CgH~fc~~Ci~~~--~~~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 11 QLTDEEECCICMDGRADLILPCAHSFCQKCIDKW--SDRHRNCPICRLQMT 59 (70)
T ss_dssp CCCCCCCCSSSCCSCCSEEETTTEEECHHHHHHS--SCCCSSCHHHHHCTT
T ss_pred cCCCCCCCeeCCcCccCcccCCCCcccHHHHHHH--HHCcCcCCCcCCccc
Confidence 45667899999885443222 4442 2211 125678999987665
No 310
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=39.65 E-value=2.8 Score=26.18 Aligned_cols=41 Identities=34% Similarity=0.920 Sum_probs=20.7
Q ss_pred cccCCCCCcchhH-----HHh-HhhhhhccCCC---cccccCcccccchh
Q 028361 44 CFPCPFCYLEIEA-----HMI-CSHLQEEHCFE---MKNAVCPLCAANLG 84 (210)
Q Consensus 44 ~f~CP~C~e~~d~-----~~L-~~H~~~eH~~e---~~~~vCPvC~~~v~ 84 (210)
.+.||.|.++|.. ..| |-|.-=.++.. .....||+|...+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 4668888776632 112 33321111111 12267999987653
No 311
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=39.61 E-value=8.8 Score=26.75 Aligned_cols=33 Identities=12% Similarity=0.191 Sum_probs=20.6
Q ss_pred CccccccccCCCCCcchhHHHhHhhhhhccCCCcccccCccccc
Q 028361 38 DDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAA 81 (210)
Q Consensus 38 d~d~~~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~ 81 (210)
|..+.....||.|.-.+.... +....+||-|..
T Consensus 2 d~~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (68)
T 2jr6_A 2 EKKFLDILVCPVTKGRLEYHQ-----------DKQELWSRQAKL 34 (68)
T ss_dssp CCSSSCCCBCSSSCCBCEEET-----------TTTEEEETTTTE
T ss_pred ChHHhhheECCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 345677889999976544321 124467888754
No 312
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=39.22 E-value=10 Score=27.43 Aligned_cols=36 Identities=19% Similarity=0.493 Sum_probs=24.9
Q ss_pred ccCCCCCcchhHHHhHhhhhhccCCCcccccCcccccchhh
Q 028361 45 FPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 45 f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
..||.|...++...+..- ..+.....||||-..+..
T Consensus 49 ~~CP~Cr~~~~~~~l~~l-----~i~~~~~~C~iC~~~~~~ 84 (133)
T 4ap4_A 49 NTCPTCRKKINHKRYHPI-----YIGSGTVSCPICMDGYSE 84 (133)
T ss_dssp SBCTTTCCBCTTTCEEEC-----BCSSSSCBCTTTCCBHHH
T ss_pred CCCCCCCCcCcccccccc-----ccCCCCCCCCCCCCcccc
Confidence 489999988876554331 234556789999887654
No 313
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=38.60 E-value=7.2 Score=30.21 Aligned_cols=34 Identities=15% Similarity=0.389 Sum_probs=22.1
Q ss_pred ccccccccCCCCCc-chhHHHhHhhhhhccCCCcccccCcccccchh
Q 028361 39 DDVKACFPCPFCYL-EIEAHMICSHLQEEHCFEMKNAVCPLCAANLG 84 (210)
Q Consensus 39 ~d~~~~f~CP~C~e-~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~ 84 (210)
..+...|.||||+. .+--.+ ..--.|+-|...+.
T Consensus 55 ~~q~akytCPfCGk~~vKR~a------------vGIW~C~~Cgk~fA 89 (116)
T 3cc2_Z 55 SEMNEDHACPNCGEDRVDRQG------------TGIWQCSYCDYKFT 89 (116)
T ss_dssp HHHHSCEECSSSCCEEEEEEE------------TTEEEETTTCCEEE
T ss_pred HHhccCCcCCCCCCceeEecC------------ceeEECCCCCCEEE
Confidence 45778999999987 333222 12334888988743
No 314
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.58 E-value=3 Score=28.98 Aligned_cols=13 Identities=38% Similarity=0.907 Sum_probs=8.9
Q ss_pred ccccCcccccchh
Q 028361 72 KNAVCPLCAANLG 84 (210)
Q Consensus 72 ~~~vCPvC~~~v~ 84 (210)
++..||+|...+.
T Consensus 63 ~~~~CP~CR~~~~ 75 (81)
T 2ecl_A 63 QNNRCPLCQQDWV 75 (81)
T ss_dssp TCCBCTTTCCBCC
T ss_pred hCCCCCCcCCCcc
Confidence 3458999987653
No 315
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=38.14 E-value=9.4 Score=26.77 Aligned_cols=33 Identities=18% Similarity=0.362 Sum_probs=20.4
Q ss_pred CccccccccCCCCCcchhHHHhHhhhhhccCCCcccccCccccc
Q 028361 38 DDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAA 81 (210)
Q Consensus 38 d~d~~~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~ 81 (210)
|..+.....||.|.-.+.... +....+||-|..
T Consensus 2 d~~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (70)
T 2js4_A 2 ESRLLDILVCPVCKGRLEFQR-----------AQAELVCNADRL 34 (70)
T ss_dssp CCCCCCCCBCTTTCCBEEEET-----------TTTEEEETTTTE
T ss_pred ChHHhhheECCCCCCcCEEeC-----------CCCEEEcCCCCc
Confidence 345677889999977544321 124467888744
No 316
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=37.64 E-value=14 Score=22.53 Aligned_cols=22 Identities=32% Similarity=0.670 Sum_probs=16.5
Q ss_pred cccCCCCCcchh-HHHhHhhhhh
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQE 65 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~ 65 (210)
.|.|+.|+..|. ...|..|+..
T Consensus 24 ~~~C~~C~k~f~~~~~L~~H~~~ 46 (54)
T 1yui_A 24 PATCPICYAVIRQSRNLRRHLEL 46 (54)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 599999999654 5667788754
No 317
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=37.38 E-value=24 Score=23.80 Aligned_cols=25 Identities=24% Similarity=0.485 Sum_probs=14.9
Q ss_pred cccCCCCCcchh-HHHhHhhhhhccCC
Q 028361 44 CFPCPFCYLEIE-AHMICSHLQEEHCF 69 (210)
Q Consensus 44 ~f~CP~C~e~~d-~~~L~~H~~~eH~~ 69 (210)
-|.|+.|++-|. ...|..|+.. |.-
T Consensus 13 py~C~~CgK~F~~~s~L~~H~r~-Htg 38 (66)
T 2epp_A 13 ILPCGLCGKVFTDANRLRQHEAQ-HGV 38 (66)
T ss_dssp CCCCTTTCCCCSCHHHHHHHHHH-HTT
T ss_pred CcCCCCCCCccCCHHHHHhhhhh-hCC
Confidence 377888877543 3456666544 443
No 318
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=37.28 E-value=10 Score=27.52 Aligned_cols=14 Identities=14% Similarity=0.406 Sum_probs=10.3
Q ss_pred ccccCCCCCcchhH
Q 028361 43 ACFPCPFCYLEIEA 56 (210)
Q Consensus 43 ~~f~CP~C~e~~d~ 56 (210)
....||||+.-|-.
T Consensus 52 g~~~CpYCg~~f~l 65 (80)
T 2jvm_A 52 GFVECGYCDRRYIH 65 (80)
T ss_dssp CEEECSSSSCEEEE
T ss_pred CeEECCCCCCEEEe
Confidence 46889999975543
No 319
>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A
Probab=37.21 E-value=12 Score=30.37 Aligned_cols=51 Identities=27% Similarity=0.532 Sum_probs=15.0
Q ss_pred cccCCC----CCcchhHHHhHhhhhhccCCCcccccCcc----cccc-hhhhHHhhHhhhhcc
Q 028361 44 CFPCPF----CYLEIEAHMICSHLQEEHCFEMKNAVCPL----CAAN-LGKDAAEHFMVQHAS 97 (210)
Q Consensus 44 ~f~CP~----C~e~~d~~~L~~H~~~eH~~e~~~~vCPv----C~~~-v~~d~i~Hi~~qh~~ 97 (210)
.||||| |.+-+--.....|-+. =.| ++--||+ |.-. ...+++.|++..|+.
T Consensus 6 ~~pC~~~~~GC~~~~~y~~~~~He~~-C~f--~p~~Cp~~g~~C~~~G~~~~l~~H~~~~H~~ 65 (193)
T 2a25_A 6 LFPCKYASSGCEITLPHTEKADHEEL-CEF--RPYSCPCPGASCKWQGSLDAVMPHLMHQHKS 65 (193)
T ss_dssp ---------------------------------CEECCCC--CCCCEECSTTHHHHHHHHCTT
T ss_pred EecCCCCCCCCCcccccccccchhhc-CCC--CCccCCCCCCCCcCCCCHHHHHHHHHHHCCC
Confidence 577777 7776666666666432 112 3345665 6532 223788888877764
No 320
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.16 E-value=3.4 Score=28.13 Aligned_cols=45 Identities=20% Similarity=0.482 Sum_probs=25.5
Q ss_pred cccccccCCCCCcch-hHHHh-Hhhh-hhccCCCcccccCcccccchhh
Q 028361 40 DVKACFPCPFCYLEI-EAHMI-CSHL-QEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 40 d~~~~f~CP~C~e~~-d~~~L-~~H~-~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
+....+.||.|.+.+ +.+.| |-|. -=..+. .+...||+|...+..
T Consensus 21 ~~~~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~-~~~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 21 RLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCA-EAVDKCPMCYTVITF 68 (75)
T ss_dssp HHHHHHSCSSSCSSCCCBCCSSSCCCCBCHHHH-HHCSBCTTTCCBCCC
T ss_pred cCCCCCCCCcCCCCCCCEEEecCCCHHHHHHHh-hCCCCCccCCceecC
Confidence 355678999998744 33332 3332 111111 134689999987754
No 321
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=35.55 E-value=8.9 Score=26.73 Aligned_cols=32 Identities=13% Similarity=0.253 Sum_probs=20.1
Q ss_pred ccccccccCCCCCcchhHHHhHhhhhhccCCCcccccCccccc
Q 028361 39 DDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAA 81 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~ 81 (210)
..+.....||.|.-.+.... +....+||.|..
T Consensus 3 ~~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (68)
T 2hf1_A 3 AKFLEILVCPLCKGPLVFDK-----------SKDELICKGDRL 34 (68)
T ss_dssp CCCEEECBCTTTCCBCEEET-----------TTTEEEETTTTE
T ss_pred hHHhhheECCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 45667889999976544321 124468888854
No 322
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=35.28 E-value=4.3 Score=30.22 Aligned_cols=37 Identities=30% Similarity=0.631 Sum_probs=21.7
Q ss_pred cCCCCCcchhHH--------------------HhHhhhhhccCCCc---ccccCcccccc
Q 028361 46 PCPFCYLEIEAH--------------------MICSHLQEEHCFEM---KNAVCPLCAAN 82 (210)
Q Consensus 46 ~CP~C~e~~d~~--------------------~L~~H~~~eH~~e~---~~~vCPvC~~~ 82 (210)
.|+.|.+.|+.. .-|.|.--.|+.+. .+..||+|...
T Consensus 39 ~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~ 98 (106)
T 3dpl_R 39 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 98 (106)
T ss_dssp CCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSB
T ss_pred CCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCc
Confidence 488887766643 22445443344333 35679999775
No 323
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=35.12 E-value=10 Score=26.49 Aligned_cols=33 Identities=12% Similarity=0.319 Sum_probs=20.2
Q ss_pred CccccccccCCCCCcchhHHHhHhhhhhccCCCcccccCccccc
Q 028361 38 DDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAA 81 (210)
Q Consensus 38 d~d~~~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~ 81 (210)
|..+.....||.|.-.+.... +....+||-|..
T Consensus 2 d~~LLeiL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (69)
T 2pk7_A 2 DTKLLDILACPICKGPLKLSA-----------DKTELISKGAGL 34 (69)
T ss_dssp -CCGGGTCCCTTTCCCCEECT-----------TSSEEEETTTTE
T ss_pred ChHHHhheeCCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 345677889999976544321 124468888854
No 324
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=34.91 E-value=8.1 Score=29.41 Aligned_cols=37 Identities=30% Similarity=0.631 Sum_probs=0.0
Q ss_pred cCCCCCcchhHH--------------------HhHhhhhhccCCCc---ccccCcccccc
Q 028361 46 PCPFCYLEIEAH--------------------MICSHLQEEHCFEM---KNAVCPLCAAN 82 (210)
Q Consensus 46 ~CP~C~e~~d~~--------------------~L~~H~~~eH~~e~---~~~vCPvC~~~ 82 (210)
.|+.|-++|+.. .-|.|.--.|+.+. .+..||+|...
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~ 109 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 109 (117)
T ss_dssp ------------------------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCe
Confidence 688888777642 24777777777755 45789999775
No 325
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=34.89 E-value=13 Score=37.43 Aligned_cols=36 Identities=19% Similarity=0.451 Sum_probs=24.3
Q ss_pred ccccccCCCCCcchhHHHhHhhhhhccCCCcccccCccccc
Q 028361 41 VKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAA 81 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~ 81 (210)
.-..|.||.|+..|....-. .-.|.+..+.||.|.-
T Consensus 246 ~s~~~~c~~~~~~~~~~~~~-----~fsfn~p~g~C~~C~G 281 (916)
T 3pih_A 246 FSENLMCPVCGIGFPEITPK-----LFSFNSPYGACPNCHG 281 (916)
T ss_dssp EESSCBCTTTCCCCCCCSGG-----GGCTTSTTTBCTTTTT
T ss_pred ecccccCcccCCccCCCCHh-----hcCCCCCCCcCCeeec
Confidence 44679999999765433221 1355666799999975
No 326
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=34.67 E-value=7.8 Score=29.91 Aligned_cols=44 Identities=16% Similarity=0.352 Sum_probs=26.3
Q ss_pred ccccccccCCCCCcchhHH--HhHhh-----hhhccCCCcccccCcccccch
Q 028361 39 DDVKACFPCPFCYLEIEAH--MICSH-----LQEEHCFEMKNAVCPLCAANL 83 (210)
Q Consensus 39 ~d~~~~f~CP~C~e~~d~~--~L~~H-----~~~eH~~e~~~~vCPvC~~~v 83 (210)
+.+...|.||.|.+-|... .-|-| |-... ....+..||+|...+
T Consensus 26 ~~l~~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~-~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 26 TKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASI-LSSGPQNCAACVHEG 76 (141)
T ss_dssp GGCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHH-GGGSCEECHHHHHTT
T ss_pred ccCCcCcCCCCCChhhcCcEECCCCCccCHHHHHHH-HhcCCCCCCCCCCcc
Confidence 4567889999998755422 23333 22221 123446899998754
No 327
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=34.21 E-value=9.9 Score=26.68 Aligned_cols=12 Identities=25% Similarity=0.860 Sum_probs=9.3
Q ss_pred ccccCCCCCcch
Q 028361 43 ACFPCPFCYLEI 54 (210)
Q Consensus 43 ~~f~CP~C~e~~ 54 (210)
....||||+.-|
T Consensus 39 g~~~CpYCg~~f 50 (67)
T 2jrr_A 39 GWVECPYCDCKY 50 (67)
T ss_dssp SEEEETTTTEEE
T ss_pred CeEECCCCCCEE
Confidence 467899998744
No 328
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=33.81 E-value=5.6 Score=28.98 Aligned_cols=13 Identities=38% Similarity=0.787 Sum_probs=7.8
Q ss_pred ccccCcccccchh
Q 028361 72 KNAVCPLCAANLG 84 (210)
Q Consensus 72 ~~~vCPvC~~~v~ 84 (210)
.++.||-|...+.
T Consensus 30 ~~afCPeCgq~Le 42 (81)
T 2jrp_A 30 LQALCPDCRQPLQ 42 (81)
T ss_dssp EEEECSSSCSCCC
T ss_pred CcccCcchhhHHH
Confidence 3446777766653
No 329
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=33.31 E-value=32 Score=17.76 Aligned_cols=21 Identities=19% Similarity=0.532 Sum_probs=14.1
Q ss_pred ccCC--CCCcch-hHHHhHhhhhh
Q 028361 45 FPCP--FCYLEI-EAHMICSHLQE 65 (210)
Q Consensus 45 f~CP--~C~e~~-d~~~L~~H~~~ 65 (210)
|.|+ .|+..| ....|..|+..
T Consensus 3 ~~C~~~~C~k~f~~~~~L~~H~~~ 26 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRSDELQRHKRT 26 (31)
T ss_dssp CBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred cCCcCCCCCcccCCHhHHHHHHHH
Confidence 7787 888855 45567777643
No 330
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=33.12 E-value=17 Score=25.15 Aligned_cols=30 Identities=13% Similarity=0.318 Sum_probs=22.2
Q ss_pred cccccCCCCCcchhHHHhHhhhhhccCCCcccccCcccccch
Q 028361 42 KACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL 83 (210)
Q Consensus 42 ~~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~v 83 (210)
...|.|.-|+.++++. ....+-||-|..+|
T Consensus 19 ~v~Y~C~~Cg~~~~l~------------~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQ------------AKEVIRCRECGHRV 48 (63)
T ss_dssp CCCCBCSSSCCBCCCC------------SSSCCCCSSSCCCC
T ss_pred CeEEECCCCCCeeecC------------CCCceECCCCCcEE
Confidence 5689999999888743 12457899998654
No 331
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=32.57 E-value=23 Score=26.88 Aligned_cols=28 Identities=18% Similarity=0.299 Sum_probs=20.8
Q ss_pred ccccCCCCCcchhHHHhHhhhhhccCCCcccccCcccccc
Q 028361 43 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (210)
Q Consensus 43 ~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~~ 82 (210)
..|.|--||..| + .--.++..||.|...
T Consensus 66 ~p~~C~~CG~~F-----~-------~~~~kPsrCP~CkSe 93 (105)
T 2gmg_A 66 KPAQCRKCGFVF-----K-------AEINIPSRCPKCKSE 93 (105)
T ss_dssp CCCBBTTTCCBC-----C-------CCSSCCSSCSSSCCC
T ss_pred ECcChhhCcCee-----c-------ccCCCCCCCcCCCCC
Confidence 579999999998 1 112456899999874
No 332
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=32.20 E-value=6.4 Score=25.64 Aligned_cols=41 Identities=27% Similarity=0.627 Sum_probs=22.2
Q ss_pred cccCCCCCcchhHH---HhHhhhhhccCCC---cccccCcccccchh
Q 028361 44 CFPCPFCYLEIEAH---MICSHLQEEHCFE---MKNAVCPLCAANLG 84 (210)
Q Consensus 44 ~f~CP~C~e~~d~~---~L~~H~~~eH~~e---~~~~vCPvC~~~v~ 84 (210)
...||.|.+.+... .-|-|.-=..+.. .++..||+|...+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 5 AERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhH
Confidence 45788888766431 2244431111111 13457999987765
No 333
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.70 E-value=11 Score=21.57 Aligned_cols=24 Identities=17% Similarity=0.368 Sum_probs=17.4
Q ss_pred cccCCCCCcch-hHHHhHhhhhhccC
Q 028361 44 CFPCPFCYLEI-EAHMICSHLQEEHC 68 (210)
Q Consensus 44 ~f~CP~C~e~~-d~~~L~~H~~~eH~ 68 (210)
.|.|+.|+..| ....|..|+.. |.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~ 36 (44)
T 2eox_A 12 SYNCNECGKAFTRIFHLTRHQKI-HT 36 (44)
T ss_dssp CEEETTTTEEESSSHHHHTTHHH-HC
T ss_pred CeECcccCcccCCHHHHHHHHHH-hC
Confidence 49999999855 45677788754 43
No 334
>3i1m_R 30S ribosomal protein S18; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_R* 1vs5_R 3i1o_R 3i1q_R 3i1s_R 3i1z_R 3i21_R 3izv_V* 3izw_V* 3kc4_R 3or9_R 3ora_R 3sfs_R* 3uoq_R* 4gaq_R* 4gas_R* 2qal_R* 1p6g_R 1p87_R 2aw7_R ...
Probab=31.58 E-value=12 Score=26.77 Aligned_cols=31 Identities=6% Similarity=0.292 Sum_probs=8.7
Q ss_pred CCcccccCcccccchh------hhHHhhHhhhhcchh
Q 028361 69 FEMKNAVCPLCAANLG------KDAAEHFMVQHASSL 99 (210)
Q Consensus 69 ~e~~~~vCPvC~~~v~------~d~i~Hi~~qh~~~~ 99 (210)
|-.+.-+||+|+.++. .+++.++..+.|.++
T Consensus 4 ~~~r~k~C~fc~~~~~~iDYknv~lL~~Fis~~GkIl 40 (75)
T 3i1m_R 4 YFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIV 40 (75)
T ss_dssp ----------------CCSTTCHHHHGGGBCTTCCBC
T ss_pred cCCCCCCCCcccCCCCcCCcCCHHHHHHHcCcCCCCc
Confidence 3445567888877653 256666665666655
No 335
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.52 E-value=13 Score=26.20 Aligned_cols=11 Identities=27% Similarity=0.809 Sum_probs=8.1
Q ss_pred cccCcccccch
Q 028361 73 NAVCPLCAANL 83 (210)
Q Consensus 73 ~~vCPvC~~~v 83 (210)
+..||+|...+
T Consensus 58 ~~~CplCr~~~ 68 (80)
T 2d8s_A 58 TRCCELCKYEF 68 (80)
T ss_dssp CSBCSSSCCBC
T ss_pred CCCCCCCCCee
Confidence 46899997764
No 336
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=30.26 E-value=17 Score=27.66 Aligned_cols=43 Identities=23% Similarity=0.438 Sum_probs=28.7
Q ss_pred cccccCCCCCc--chhH---HHhHhhhhhccCCCccc------ccCcccccchh
Q 028361 42 KACFPCPFCYL--EIEA---HMICSHLQEEHCFEMKN------AVCPLCAANLG 84 (210)
Q Consensus 42 ~~~f~CP~C~e--~~d~---~~L~~H~~~eH~~e~~~------~vCPvC~~~v~ 84 (210)
-.-|.|--|+. +|+. ..+...+...+-|.... |+||-|..+-+
T Consensus 85 H~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~GiC~~C~~~~~ 138 (139)
T 3mwm_A 85 HHHLVCRACGKAVEVEGPAVEKWAEAIAAEHGYVNVAHTVEIFGTCADCAGASG 138 (139)
T ss_dssp CEEEEETTTCCEEEECCHHHHHHHHHHHHHTTCCSCCCCCEEEECCHHHHCC--
T ss_pred ccEEEECCCCCEeecccccHHHHHHHHHHhCCCEEEeeEEEEEEEChHHhCccC
Confidence 34588999997 6653 34566676777775533 78999987643
No 337
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=30.01 E-value=16 Score=25.40 Aligned_cols=32 Identities=13% Similarity=0.025 Sum_probs=19.5
Q ss_pred CccccccccCCCCCcchhHHHhHhhhhhccCCCcccccCcccc
Q 028361 38 DDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCA 80 (210)
Q Consensus 38 d~d~~~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~ 80 (210)
|..+.....||.|.-.+.... +...-+||-|.
T Consensus 4 d~~LLeiL~CP~ck~~L~~~~-----------~~g~LvC~~c~ 35 (67)
T 2jny_A 4 DPQLLEVLACPKDKGPLRYLE-----------SEQLLVNERLN 35 (67)
T ss_dssp CGGGTCCCBCTTTCCBCEEET-----------TTTEEEETTTT
T ss_pred CHHHHHHhCCCCCCCcCeEeC-----------CCCEEEcCCCC
Confidence 455777888999976443221 12346788774
No 338
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=29.98 E-value=7.5 Score=34.74 Aligned_cols=44 Identities=25% Similarity=0.597 Sum_probs=27.3
Q ss_pred ccccccCCCCCc-chhHHHh-Hhhh-hhccCCCcccccCcccccchhh
Q 028361 41 VKACFPCPFCYL-EIEAHMI-CSHL-QEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 41 ~~~~f~CP~C~e-~~d~~~L-~~H~-~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
+...+.||.|.+ -.+.+.| |-|. -=..|... -..||+|...+..
T Consensus 292 l~~~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~-~~~CP~CR~~i~~ 338 (345)
T 3t6p_A 292 LQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPS-LRKCPICRGIIKG 338 (345)
T ss_dssp HHTTCBCTTTSSSBCCEEEETTCCEEECTTTGGG-CSBCTTTCCBCCE
T ss_pred CcCCCCCCccCCcCCceEEcCCCChhHhHHHHhc-CCcCCCCCCCccC
Confidence 345789999988 4445443 5564 22223322 2689999987653
No 339
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=29.61 E-value=15 Score=28.21 Aligned_cols=41 Identities=20% Similarity=0.399 Sum_probs=24.5
Q ss_pred cccccCCCCCc--chhH---HHhHhhhhhccCCCcc------cccCcccccc
Q 028361 42 KACFPCPFCYL--EIEA---HMICSHLQEEHCFEMK------NAVCPLCAAN 82 (210)
Q Consensus 42 ~~~f~CP~C~e--~~d~---~~L~~H~~~eH~~e~~------~~vCPvC~~~ 82 (210)
-.-|.|--|+. +|+. ..+...+...+-|... .|+||-|..+
T Consensus 88 H~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~GiC~~C~~~ 139 (145)
T 3eyy_A 88 HIHLVCRDCTNVIEADLSVAADFTAKLREQFGFDTDMKHFAIFGRCESCSLK 139 (145)
T ss_dssp SEEEEESSSSCEEEECGGGGHHHHHHHHHHTCEEECSCSSCEEEEECC----
T ss_pred ceEEEECCCCCEEEecCccHHHHHHHHHHhCCCEEEeEEEEEEEECHHHhCc
Confidence 35689999997 6653 3455666655555432 2789999865
No 340
>1e7l_A GP49, recombination endonuclease VII; resolvase, holliday junction, DNAse; HET: SO4; 1.32A {Bacteriophage T4} SCOP: a.140.4.1 d.4.1.5 PDB: 2qnc_A* 1en7_A 1e7d_A 2qnf_A*
Probab=28.32 E-value=7.6 Score=31.50 Aligned_cols=43 Identities=26% Similarity=0.604 Sum_probs=27.0
Q ss_pred ccccCCCCCcchhHHHhHhhhhhccCC------CcccccCcccccchhh
Q 028361 43 ACFPCPFCYLEIEAHMICSHLQEEHCF------EMKNAVCPLCAANLGK 85 (210)
Q Consensus 43 ~~f~CP~C~e~~d~~~L~~H~~~eH~~------e~~~~vCPvC~~~v~~ 85 (210)
+.-.||.|+..|+...=-.|++=.|+. ..+-.+|.-|...+|.
T Consensus 19 Q~g~C~IC~~~l~~~~~~~~vDHdH~~~g~~tG~VRGlLC~~CN~~lG~ 67 (157)
T 1e7l_A 19 QNGKCLICQRELNPDVQANHLDHDHELNGPKAGKVRGLLCNLCDAAEGQ 67 (157)
T ss_dssp TTTBCTTTCCBCCSSGGGSEEEECCCCSSTTTTBEEEEECHHHHHHHHH
T ss_pred hCCcCcccCCccccccccccccCCCCCCCCCCCcchhhccHhHhchhcc
Confidence 346899999977643324466555622 2244669999877663
No 341
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=27.50 E-value=22 Score=21.05 Aligned_cols=21 Identities=24% Similarity=0.422 Sum_probs=16.2
Q ss_pred ccccCCCCCcchh-HHHhHhhh
Q 028361 43 ACFPCPFCYLEIE-AHMICSHL 63 (210)
Q Consensus 43 ~~f~CP~C~e~~d-~~~L~~H~ 63 (210)
--|.|+.|+..|. ...|..|.
T Consensus 7 kp~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 7 ARFMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCCEETTTTEECSCHHHHHHHH
T ss_pred cCeECCCCCCccCCHhHccCcC
Confidence 3599999999665 56778886
No 342
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=27.49 E-value=43 Score=17.30 Aligned_cols=22 Identities=18% Similarity=0.357 Sum_probs=14.2
Q ss_pred cccCC--CCCcchh-HHHhHhhhhh
Q 028361 44 CFPCP--FCYLEIE-AHMICSHLQE 65 (210)
Q Consensus 44 ~f~CP--~C~e~~d-~~~L~~H~~~ 65 (210)
.|.|+ .|+..|. ...|..|+..
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~ 27 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKS 27 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHH
Confidence 37788 7887553 4566777643
No 343
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=27.17 E-value=7.6 Score=29.26 Aligned_cols=10 Identities=40% Similarity=0.982 Sum_probs=8.2
Q ss_pred ccccCCCCCc
Q 028361 43 ACFPCPFCYL 52 (210)
Q Consensus 43 ~~f~CP~C~e 52 (210)
..|.||||..
T Consensus 29 ~dy~Cp~C~~ 38 (184)
T 4dvc_A 29 FSFYCPHCNT 38 (184)
T ss_dssp ECTTCHHHHH
T ss_pred ECCCCHhHHH
Confidence 3799999964
No 344
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=26.92 E-value=4.2 Score=28.33 Aligned_cols=44 Identities=27% Similarity=0.666 Sum_probs=26.0
Q ss_pred ccccccCCCCCc-chhHHHh-Hhhh-hhccCCCcccccCcccccchhh
Q 028361 41 VKACFPCPFCYL-EIEAHMI-CSHL-QEEHCFEMKNAVCPLCAANLGK 85 (210)
Q Consensus 41 ~~~~f~CP~C~e-~~d~~~L-~~H~-~~eH~~e~~~~vCPvC~~~v~~ 85 (210)
++....||.|.+ ..+...| |-|. -=..+.. +-..||+|...+..
T Consensus 15 l~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~-~~~~CP~Cr~~i~~ 61 (79)
T 2yho_A 15 LKEAMLCMVCCEEEINSTFCPCGHTVCCESCAA-QLQSCPVCRSRVEH 61 (79)
T ss_dssp HHHHTBCTTTSSSBCCEEEETTCBCCBCHHHHT-TCSBCTTTCCBCCE
T ss_pred CCCCCEeEEeCcccCcEEEECCCCHHHHHHHHH-hcCcCCCCCchhhC
Confidence 455678999987 5555444 4443 1111222 12389999988765
No 345
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=26.86 E-value=20 Score=28.13 Aligned_cols=41 Identities=24% Similarity=0.446 Sum_probs=27.5
Q ss_pred cccccCCCCCc--chh---HHHhHhhhhhccCCCcc------cccCcccccc
Q 028361 42 KACFPCPFCYL--EIE---AHMICSHLQEEHCFEMK------NAVCPLCAAN 82 (210)
Q Consensus 42 ~~~f~CP~C~e--~~d---~~~L~~H~~~eH~~e~~------~~vCPvC~~~ 82 (210)
-.-|.|--|+. +|+ +..+...+...+-|... .|+||-|..+
T Consensus 105 H~HliC~~CG~v~e~~~~~~~~~~~~~~~~~Gf~i~~~~l~~~GiC~~C~~~ 156 (162)
T 4ets_A 105 HDHMICKNCGKIIEFENPIIERQQALIAKEHGFKLTGHLMQLYGVCGDCNNQ 156 (162)
T ss_dssp CEEEEETTTCCEEEECCHHHHHHHHHHHHHTTCEEEEEEEEEEEECSTTC--
T ss_pred ccEEEECCCCCEEEecccchhHHHHHHHHhCCCEEEEEEEEEEEEChHHcCc
Confidence 34589999997 665 34556667677777553 2789999865
No 346
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=26.47 E-value=6.2 Score=26.24 Aligned_cols=39 Identities=23% Similarity=0.620 Sum_probs=21.8
Q ss_pred cccCCCCCc-chhHHHh---Hhhh------hhccCCCcccccCcccccchh
Q 028361 44 CFPCPFCYL-EIEAHMI---CSHL------QEEHCFEMKNAVCPLCAANLG 84 (210)
Q Consensus 44 ~f~CP~C~e-~~d~~~L---~~H~------~~eH~~e~~~~vCPvC~~~v~ 84 (210)
...|+.|.+ .-|...+ |-|. ... ....+..||+|...+.
T Consensus 8 ~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~--~~~~~~~CPiCR~~i~ 56 (64)
T 2vje_A 8 IEPCVICQGRPKNGCIVHGKTGHLMACFTCAKK--LKKRNKPCPVCRQPIQ 56 (64)
T ss_dssp GSCCTTTSSSCSCEEEEETTEEEEEECHHHHHH--HHHTTCCCTTTCCCCC
T ss_pred cCCCCcCCCCCCCEEEECCCCCChhhHHHHHHH--HHHcCCcCCCcCcchh
Confidence 346999977 4444433 4443 111 1123457999988764
No 347
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.59 E-value=29 Score=20.62 Aligned_cols=22 Identities=23% Similarity=0.529 Sum_probs=16.2
Q ss_pred cccCCC--CCcch-hHHHhHhhhhh
Q 028361 44 CFPCPF--CYLEI-EAHMICSHLQE 65 (210)
Q Consensus 44 ~f~CP~--C~e~~-d~~~L~~H~~~ 65 (210)
-|.|++ |+.-| ....|..|+..
T Consensus 9 p~~C~~~~C~k~F~~~~~L~~H~r~ 33 (38)
T 2eln_A 9 LLKCPTDGCDYSTPDKYKLQAHLKV 33 (38)
T ss_dssp CEECSSSSCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 389987 99854 66778888644
No 348
>2b9d_A E7 protein; zinc finger, homodimer, transcription, viral protein; 1.60A {Human papillomavirus type 1A} SCOP: g.91.1.1
Probab=25.47 E-value=46 Score=21.96 Aligned_cols=33 Identities=27% Similarity=0.556 Sum_probs=19.5
Q ss_pred ccCCCCCcc---------hhHHHhHhhhhhccCCCcccccCcccccc
Q 028361 45 FPCPFCYLE---------IEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (210)
Q Consensus 45 f~CP~C~e~---------~d~~~L~~H~~~eH~~e~~~~vCPvC~~~ 82 (210)
-.|..|+.. .++-.|..-+.. .-.-|||.|+.+
T Consensus 9 t~C~~C~~~lrl~V~at~~~IR~lqqLLl~-----~L~lvCp~Ca~~ 50 (52)
T 2b9d_A 9 ASCAYCEKLVRLTVLADHSAIRQLEEMLLR-----SLNIVCPLCTLQ 50 (52)
T ss_dssp EECTTTCCEEEEEEEECHHHHHHHHHHHHH-----TCCCCCTTTTTC
T ss_pred EECCCCCCeEEEEEEeCchhHHHHHHHhhC-----CceEECcchhcc
Confidence 467777763 345555554443 344589999853
No 349
>2yre_A F-box only protein 30; zinc binding, E3 ubiquitin ligase, SCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.96 E-value=45 Score=25.00 Aligned_cols=46 Identities=22% Similarity=0.396 Sum_probs=28.7
Q ss_pred cccCC-CCCcchhHHHhHhhhhhccCCCcccccCcc----cccchhh-hHHhhHh
Q 028361 44 CFPCP-FCYLEIEAHMICSHLQEEHCFEMKNAVCPL----CAANLGK-DAAEHFM 92 (210)
Q Consensus 44 ~f~CP-~C~e~~d~~~L~~H~~~eH~~e~~~~vCPv----C~~~v~~-d~i~Hi~ 92 (210)
-.+|| .|+..|=...|-+|+.. +-.+. +.|+- |..++.+ ++..|++
T Consensus 37 ~i~CP~~Cga~i~rckL~EH~~~--CP~a~-v~C~~~~yGCp~~~~R~~L~~He~ 88 (100)
T 2yre_A 37 LIGCPLVCGAVFHSCKADEHRLL--CPFER-VPCLNSDFGCPFTMARNKVAEHLE 88 (100)
T ss_dssp EEECTTCCSCEEEHHHHHHHHHH--CSSSE-EECTTTTTTCCCEEESSTHHHHHH
T ss_pred eeeCCcccCCeeehhhHHHHHhh--ccccc-ccccccCcCCceeecHHHHHHHHh
Confidence 46699 79888888999999855 33222 44443 4444332 5666654
No 350
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=24.90 E-value=22 Score=36.23 Aligned_cols=36 Identities=22% Similarity=0.519 Sum_probs=24.0
Q ss_pred ccccccCCCCCcchhHHHhHhhhhhccCCCcccccCccccc
Q 028361 41 VKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAA 81 (210)
Q Consensus 41 ~~~~f~CP~C~e~~d~~~L~~H~~~eH~~e~~~~vCPvC~~ 81 (210)
.-..|.||.|+..|+...= ..=.|.+-.+.||.|.-
T Consensus 264 ~s~~~~cp~~g~~~~~~~p-----~~FSfN~p~GaCp~C~G 299 (972)
T 2r6f_A 264 FSEKHACPYCGFSIGELEP-----RLFSFNSPFGACPDCDG 299 (972)
T ss_dssp EESSEECTTTCCEEECCCG-----GGGCSSSTTTBCTTTTS
T ss_pred eeccccCCCCCCcCCCCCh-----hhcCcCCCCCCCCCCcC
Confidence 3467999999976543221 11345666699999984
No 351
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=24.58 E-value=29 Score=26.08 Aligned_cols=26 Identities=23% Similarity=0.509 Sum_probs=20.5
Q ss_pred cccccccCCCCCcchhHHHhHhhhhh
Q 028361 40 DVKACFPCPFCYLEIEAHMICSHLQE 65 (210)
Q Consensus 40 d~~~~f~CP~C~e~~d~~~L~~H~~~ 65 (210)
+.-.+|.||-|+..+--.-..-|++.
T Consensus 66 ~~s~~~~C~nC~R~vaa~RFApHLeK 91 (99)
T 3mhs_C 66 ESSQYIHCENCGRDVSANRLAAHLQR 91 (99)
T ss_dssp TTSCEEECTTTCCEEEGGGHHHHHHH
T ss_pred cCCCeEECCCCCCCchhhhhHHHHHH
Confidence 34568999999888888888888764
No 352
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=23.99 E-value=34 Score=18.80 Aligned_cols=21 Identities=19% Similarity=0.360 Sum_probs=15.1
Q ss_pred cccCCC--CCcch-hHHHhHhhhh
Q 028361 44 CFPCPF--CYLEI-EAHMICSHLQ 64 (210)
Q Consensus 44 ~f~CP~--C~e~~-d~~~L~~H~~ 64 (210)
.|.|++ |+..| ....|..|+.
T Consensus 8 ~~~C~~~~C~k~f~~~~~L~~H~~ 31 (37)
T 1va1_A 8 QHICHIQGCGKVYGKTSHLRAHLR 31 (37)
T ss_dssp CEECCSTTCCCEESCHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHH
Confidence 589986 99866 4566777764
No 353
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=23.29 E-value=7.3 Score=31.00 Aligned_cols=13 Identities=8% Similarity=0.319 Sum_probs=11.0
Q ss_pred cccccccCCCCCc
Q 028361 40 DVKACFPCPFCYL 52 (210)
Q Consensus 40 d~~~~f~CP~C~e 52 (210)
|...+|.|||||-
T Consensus 8 ~~~~D~~cPwcyi 20 (202)
T 3fz5_A 8 EFWFDFSSGYAFF 20 (202)
T ss_dssp EEEECTTCHHHHH
T ss_pred EEEEeCCCHHHHH
Confidence 4677899999986
No 354
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=23.13 E-value=25 Score=23.44 Aligned_cols=19 Identities=21% Similarity=0.600 Sum_probs=14.0
Q ss_pred CccccccccCCCCCcchhH
Q 028361 38 DDDVKACFPCPFCYLEIEA 56 (210)
Q Consensus 38 d~d~~~~f~CP~C~e~~d~ 56 (210)
|..+.....||.|...+..
T Consensus 4 d~~lL~iL~CP~c~~~L~~ 22 (56)
T 2kpi_A 4 EAGLLEILACPACHAPLEE 22 (56)
T ss_dssp CCSCTTSCCCSSSCSCEEE
T ss_pred CHHHHhheeCCCCCCccee
Confidence 4567788899999775443
No 355
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=22.81 E-value=7.5 Score=30.67 Aligned_cols=22 Identities=23% Similarity=0.342 Sum_probs=13.9
Q ss_pred ccccccCCCCCcch-hHHHhHhh
Q 028361 41 VKACFPCPFCYLEI-EAHMICSH 62 (210)
Q Consensus 41 ~~~~f~CP~C~e~~-d~~~L~~H 62 (210)
...+|.||||+... -+..|..+
T Consensus 5 ~~~D~~CP~cy~~~~~l~~~~~~ 27 (203)
T 2imf_A 5 FYFDFLSPFSYLANQRLSKLAQD 27 (203)
T ss_dssp EEECTTCHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCHHHHHHHHHHHHHHHH
Confidence 45679999998743 33344443
No 356
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=22.72 E-value=26 Score=25.79 Aligned_cols=15 Identities=20% Similarity=0.410 Sum_probs=11.1
Q ss_pred ccccCCCCCcchhHH
Q 028361 43 ACFPCPFCYLEIEAH 57 (210)
Q Consensus 43 ~~f~CP~C~e~~d~~ 57 (210)
....||||+.-|-..
T Consensus 47 g~~~CpYCg~~y~~~ 61 (87)
T 2jz8_A 47 DEKICPYCSTLYRYD 61 (87)
T ss_dssp CEECCTTTCCEEECC
T ss_pred CeEECCCCCCEeEcC
Confidence 568999999866433
No 357
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=22.58 E-value=28 Score=30.60 Aligned_cols=42 Identities=24% Similarity=0.572 Sum_probs=28.1
Q ss_pred cccccccCCCCCcch-hHHHhHhhhhhccCCCcccccCcccccchhhhHHhh
Q 028361 40 DVKACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEH 90 (210)
Q Consensus 40 d~~~~f~CP~C~e~~-d~~~L~~H~~~eH~~e~~~~vCPvC~~~v~~d~i~H 90 (210)
|+.....||.|+..- + +.. .++....||.-|..=++.+.|.+
T Consensus 17 ~~~~~~~Cp~Cg~~~~~-------iv~--D~~~G~~vC~~CG~Vl~e~~id~ 59 (345)
T 3k7a_M 17 NLNIVLTCPECKVYPPK-------IVE--RFSEGDVVCALCGLVLSDKLVDT 59 (345)
T ss_dssp CCCCCCCCSTTCCSCCC-------CCC--CSSSCSCCCSSSCCCCCCCCCCT
T ss_pred cccCCCcCcCCCCCCCc-------eEE--ECCCCCEecCCCCeEcccccccC
Confidence 566677899998731 1 111 23566789999999887766543
No 358
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.43 E-value=43 Score=23.55 Aligned_cols=34 Identities=24% Similarity=0.491 Sum_probs=20.2
Q ss_pred CCcchhHHHhHhhhhhccCCCcccccCcc--cccc-hh
Q 028361 50 CYLEIEAHMICSHLQEEHCFEMKNAVCPL--CAAN-LG 84 (210)
Q Consensus 50 C~e~~d~~~L~~H~~~eH~~e~~~~vCPv--C~~~-v~ 84 (210)
||--|+...+..++...+. ......||+ |... +.
T Consensus 26 cGh~f~r~cI~~~l~~~~~-~~~~~~CP~tgc~~~~l~ 62 (94)
T 2yu4_A 26 CGHTYEEDAIVRMIESRQK-RKKKAYCPQIGCSHTDIR 62 (94)
T ss_dssp SCCEEEHHHHHHHHHHHHT-TTCCBCCCSTTCCCCCBC
T ss_pred CCCeecHHHHHHHHHHccC-cCCCCCCCcCcCcccccC
Confidence 5555666666666655321 123568999 9865 44
No 359
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=22.39 E-value=39 Score=25.82 Aligned_cols=18 Identities=11% Similarity=0.143 Sum_probs=11.6
Q ss_pred ccccCCCCCc-chhHHHhH
Q 028361 43 ACFPCPFCYL-EIEAHMIC 60 (210)
Q Consensus 43 ~~f~CP~C~e-~~d~~~L~ 60 (210)
..|.||||+. .=.+..|.
T Consensus 30 ~d~~Cp~C~~~~~~l~~l~ 48 (195)
T 2znm_A 30 FGYFCVHCHHFDPLLLKLG 48 (195)
T ss_dssp ECTTSCCTTSSCHHHHHHH
T ss_pred ECCCChhHHHHhHHHHHHH
Confidence 4799999987 33333333
No 360
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=22.39 E-value=20 Score=27.55 Aligned_cols=41 Identities=12% Similarity=0.187 Sum_probs=28.2
Q ss_pred cccccCCCCCc--chh---HHHhHhhhhhccCCCcc------cccCcccccc
Q 028361 42 KACFPCPFCYL--EIE---AHMICSHLQEEHCFEMK------NAVCPLCAAN 82 (210)
Q Consensus 42 ~~~f~CP~C~e--~~d---~~~L~~H~~~eH~~e~~------~~vCPvC~~~ 82 (210)
-.-|.|--|+. +|+ +..+...+...+-|... .|+||-|..+
T Consensus 97 H~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~GiC~~C~~~ 148 (150)
T 2xig_A 97 HDHIICLHCGKIIEFADPEIENRQNEVVKKYQAKLISHDMKMFVWCKECQES 148 (150)
T ss_dssp CEEEEETTTCCEEEECCHHHHHHHHHHHHTTTCEEEEEEEEEEEECHHHHCC
T ss_pred ceEEEECCCCCEEEecCCCHHHHHHHHHHHcCCEEeeeEEEEEEEChhhccC
Confidence 45799999997 664 34466666666776543 2779999754
No 361
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=22.30 E-value=47 Score=30.26 Aligned_cols=23 Identities=26% Similarity=0.564 Sum_probs=20.0
Q ss_pred ccccCCCCCc-chhHHHhHhhhhh
Q 028361 43 ACFPCPFCYL-EIEAHMICSHLQE 65 (210)
Q Consensus 43 ~~f~CP~C~e-~~d~~~L~~H~~~ 65 (210)
....||-|+. .||+..+..-+++
T Consensus 270 ~~ISCPtCGRt~~dl~~~~~~ie~ 293 (366)
T 3noy_A 270 EIVACPTCGRIEVDLPKVVKEVQE 293 (366)
T ss_dssp EEEECCCCTTCCSCHHHHHHHHHH
T ss_pred EEEECCCCCCccccHHHHHHHHHH
Confidence 5689999998 9999999887764
No 362
>2gag_D Heterotetrameric sarcosine oxidase delta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_D* 1x31_D* 1vrq_D* 3ad7_D* 3ad8_D* 3ad9_D* 3ada_D*
Probab=22.24 E-value=17 Score=27.31 Aligned_cols=8 Identities=38% Similarity=0.895 Sum_probs=6.7
Q ss_pred ccCCCCCc
Q 028361 45 FPCPFCYL 52 (210)
Q Consensus 45 f~CP~C~e 52 (210)
.+||+|+.
T Consensus 4 I~CP~CG~ 11 (99)
T 2gag_D 4 IDCPNCGP 11 (99)
T ss_dssp EEETTTEE
T ss_pred ecCCCCCC
Confidence 68999984
No 363
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=21.78 E-value=8.2 Score=31.11 Aligned_cols=14 Identities=14% Similarity=0.330 Sum_probs=10.9
Q ss_pred cccccccCCCCCcc
Q 028361 40 DVKACFPCPFCYLE 53 (210)
Q Consensus 40 d~~~~f~CP~C~e~ 53 (210)
+...+|.||||+..
T Consensus 9 ~~~~D~~CP~Cy~~ 22 (226)
T 1r4w_A 9 ELFYDVLSPYSWLG 22 (226)
T ss_dssp EEEECTTCHHHHHH
T ss_pred EEEEeCCChHHHHH
Confidence 35678999999873
No 364
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=21.55 E-value=32 Score=17.08 Aligned_cols=20 Identities=15% Similarity=0.411 Sum_probs=13.4
Q ss_pred ccCC--CCCcch-hHHHhHhhhh
Q 028361 45 FPCP--FCYLEI-EAHMICSHLQ 64 (210)
Q Consensus 45 f~CP--~C~e~~-d~~~L~~H~~ 64 (210)
|.|+ .|+..| ....|..|..
T Consensus 3 ~~C~~~~C~k~f~~~~~l~~H~~ 25 (29)
T 2ab3_A 3 YVCHFENCGRSFNDRRKLNRHKK 25 (29)
T ss_dssp EEECSTTTCEEESSHHHHHHHHG
T ss_pred CCCcCCcCcCccCCHHHHHHHHH
Confidence 6788 888755 4456677754
No 365
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=20.99 E-value=41 Score=25.88 Aligned_cols=31 Identities=13% Similarity=0.395 Sum_probs=25.0
Q ss_pred CCcccccCcccccch--hhhHHhhHhhhhcchh
Q 028361 69 FEMKNAVCPLCAANL--GKDAAEHFMVQHASSL 99 (210)
Q Consensus 69 ~e~~~~vCPvC~~~v--~~d~i~Hi~~qh~~~~ 99 (210)
-+..+++|..|...- ...++.|+..+|+--|
T Consensus 11 ~e~~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~ 43 (121)
T 1wir_A 11 HGRQHTPCLFCDRLFASAEETFSHCKLEHQFNI 43 (121)
T ss_dssp CCCCCEECSSSCCEESSHHHHHHHHHHSSCCCH
T ss_pred CCCCceeEecCCCcccCHHHHHHHHHHhcCCCH
Confidence 345679999999874 5699999999999644
No 366
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=20.80 E-value=16 Score=32.27 Aligned_cols=11 Identities=18% Similarity=0.561 Sum_probs=7.5
Q ss_pred ccccCcccccc
Q 028361 72 KNAVCPLCAAN 82 (210)
Q Consensus 72 ~~~vCPvC~~~ 82 (210)
.-+.||.|...
T Consensus 221 ~R~~C~~Cg~~ 231 (309)
T 2fiy_A 221 VRIKCSHCEES 231 (309)
T ss_dssp CTTSCSSSCCC
T ss_pred cCcCCcCCCCC
Confidence 45678888775
No 367
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=20.79 E-value=56 Score=23.18 Aligned_cols=27 Identities=19% Similarity=0.437 Sum_probs=19.2
Q ss_pred cccCCC--CCcchh-HHHhHhhhhhccCCC
Q 028361 44 CFPCPF--CYLEIE-AHMICSHLQEEHCFE 70 (210)
Q Consensus 44 ~f~CP~--C~e~~d-~~~L~~H~~~eH~~e 70 (210)
-|+|++ |+.-|. ...|..|+...|..+
T Consensus 27 PYkC~~~~CgKaFsr~s~L~~H~rriHTgE 56 (73)
T 1x3c_A 27 PYRCVHQGCFAAFTIQQNLILHYQAVHKSD 56 (73)
T ss_dssp SCBCCSTTCCCBCSSHHHHHHHHHHHSSSC
T ss_pred CeECCCCCcChhHcCHHHHHHHhhhhCCCC
Confidence 489976 999665 456778876667753
No 368
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=20.43 E-value=10 Score=29.16 Aligned_cols=13 Identities=31% Similarity=0.797 Sum_probs=10.0
Q ss_pred ccccccCCCCCcc
Q 028361 41 VKACFPCPFCYLE 53 (210)
Q Consensus 41 ~~~~f~CP~C~e~ 53 (210)
.-..|.||||+.-
T Consensus 17 ~f~D~~Cp~C~~~ 29 (186)
T 3bci_A 17 VYGDYKCPYCKEL 29 (186)
T ss_dssp EEECTTCHHHHHH
T ss_pred EEECCCChhHHHH
Confidence 3457999999863
No 369
>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}
Probab=20.21 E-value=48 Score=22.52 Aligned_cols=21 Identities=24% Similarity=0.564 Sum_probs=16.3
Q ss_pred ccccCCCCCc--chhHHHhHhhh
Q 028361 43 ACFPCPFCYL--EIEAHMICSHL 63 (210)
Q Consensus 43 ~~f~CP~C~e--~~d~~~L~~H~ 63 (210)
+.-.||||-- +-..+.|..|.
T Consensus 27 p~gqCPYC~~~~e~tesAlQaHf 49 (57)
T 2k9h_A 27 INGQCPYCMTITEATESALQAHY 49 (57)
T ss_dssp TTTBCTTTCCBCCSSHHHHHHHH
T ss_pred CCCCCCcccCcCCcCHHHHHHHH
Confidence 3568999965 77788888885
No 370
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=20.18 E-value=9.4 Score=31.37 Aligned_cols=15 Identities=13% Similarity=0.330 Sum_probs=11.8
Q ss_pred cccccccCCCCCcch
Q 028361 40 DVKACFPCPFCYLEI 54 (210)
Q Consensus 40 d~~~~f~CP~C~e~~ 54 (210)
|...+|.|||||-..
T Consensus 9 ~~~~D~~CPwcyi~~ 23 (234)
T 3rpp_A 9 ELFYDVLSPYSWLGF 23 (234)
T ss_dssp EEEECTTCHHHHHHH
T ss_pred EEEEeCCCHHHHHHH
Confidence 467789999998744
Done!