Query 028365
Match_columns 210
No_of_seqs 220 out of 1556
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 17:05:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028365.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028365hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 1.8E-48 6E-53 320.6 23.3 194 15-210 1-201 (201)
2 3kgl_A Cruciferin; 11S SEED gl 100.0 8.4E-33 2.9E-37 251.8 17.0 153 51-206 288-444 (466)
3 3ksc_A LEGA class, prolegumin; 100.0 1.2E-31 4.2E-36 245.8 19.1 153 50-205 322-478 (496)
4 3qac_A 11S globulin SEED stora 100.0 7.7E-32 2.6E-36 245.4 16.1 149 57-207 295-445 (465)
5 2e9q_A 11S globulin subunit be 100.0 2.8E-31 9.6E-36 242.2 17.3 148 57-206 294-443 (459)
6 3fz3_A Prunin; TREE NUT allerg 100.0 5E-31 1.7E-35 242.0 16.2 153 50-206 358-515 (531)
7 1fxz_A Glycinin G1; proglycini 100.0 1.2E-29 4.2E-34 232.3 18.5 148 57-206 310-459 (476)
8 2cav_A Protein (canavalin); vi 100.0 9.9E-30 3.4E-34 231.4 17.2 159 45-207 242-414 (445)
9 1uij_A Beta subunit of beta co 100.0 1.1E-29 3.8E-34 229.4 16.9 158 46-207 211-385 (416)
10 3c3v_A Arachin ARAH3 isoform; 100.0 2.6E-29 8.9E-34 231.1 18.7 148 57-206 344-493 (510)
11 2ea7_A 7S globulin-1; beta bar 100.0 3.8E-29 1.3E-33 226.9 17.7 159 44-206 226-400 (434)
12 2d5f_A Glycinin A3B4 subunit; 100.0 3.1E-29 1E-33 230.5 16.7 148 57-207 339-486 (493)
13 3s7i_A Allergen ARA H 1, clone 100.0 5.5E-28 1.9E-32 218.2 16.6 156 48-207 226-410 (418)
14 1dgw_A Canavalin; duplicated s 100.0 8.6E-28 2.9E-32 194.0 15.3 151 48-205 2-167 (178)
15 2phl_A Phaseolin; plant SEED s 99.9 2.3E-26 7.9E-31 206.4 16.8 144 55-207 215-373 (397)
16 2vqa_A SLL1358 protein, MNCA; 99.9 1.1E-23 3.9E-28 185.5 19.7 160 42-207 194-353 (361)
17 2ea7_A 7S globulin-1; beta bar 99.9 3.2E-24 1.1E-28 194.6 15.3 152 47-203 20-185 (434)
18 2cav_A Protein (canavalin); vi 99.9 6E-24 2E-28 193.3 15.8 155 46-205 45-212 (445)
19 1uij_A Beta subunit of beta co 99.9 4.4E-24 1.5E-28 192.8 14.0 155 47-205 8-176 (416)
20 2e9q_A 11S globulin subunit be 99.9 4.5E-24 1.5E-28 194.6 13.9 142 63-207 42-237 (459)
21 2phl_A Phaseolin; plant SEED s 99.9 6.2E-24 2.1E-28 190.6 13.7 153 46-203 10-181 (397)
22 1fxz_A Glycinin G1; proglycini 99.9 2.2E-23 7.4E-28 191.0 13.8 140 63-206 27-228 (476)
23 3qac_A 11S globulin SEED stora 99.9 2.6E-23 8.9E-28 189.3 14.0 140 63-205 29-237 (465)
24 3s7i_A Allergen ARA H 1, clone 99.9 3.6E-23 1.2E-27 186.7 14.6 150 48-204 5-169 (418)
25 2vqa_A SLL1358 protein, MNCA; 99.9 9.1E-22 3.1E-26 173.3 19.2 150 49-205 20-172 (361)
26 3ksc_A LEGA class, prolegumin; 99.9 1.7E-22 5.6E-27 185.3 13.9 138 63-203 25-214 (496)
27 2d5f_A Glycinin A3B4 subunit; 99.9 1.1E-21 3.7E-26 180.3 14.8 142 63-207 24-232 (493)
28 3kgl_A Cruciferin; 11S SEED gl 99.9 2.6E-21 9E-26 176.2 14.4 141 63-206 22-246 (466)
29 3c3v_A Arachin ARAH3 isoform; 99.9 2.4E-21 8.4E-26 178.2 13.9 139 63-205 27-269 (510)
30 1j58_A YVRK protein; cupin, de 99.8 1.2E-19 4E-24 161.4 19.9 154 46-206 222-375 (385)
31 3fz3_A Prunin; TREE NUT allerg 99.8 3.6E-20 1.2E-24 170.2 13.9 140 63-205 27-297 (531)
32 1j58_A YVRK protein; cupin, de 99.8 5.7E-20 1.9E-24 163.4 14.8 147 50-204 48-196 (385)
33 1dgw_X Canavalin; duplicated s 99.8 2.9E-19 9.9E-24 126.1 7.7 72 52-124 4-75 (79)
34 3h8u_A Uncharacterized conserv 99.6 2.4E-14 8.1E-19 107.3 10.8 84 84-172 38-121 (125)
35 3l2h_A Putative sugar phosphat 99.6 5E-14 1.7E-18 110.6 12.4 79 84-168 45-125 (162)
36 1v70_A Probable antibiotics sy 99.5 8.6E-14 2.9E-18 99.7 12.0 79 82-166 25-103 (105)
37 3ibm_A Cupin 2, conserved barr 99.5 7.3E-13 2.5E-17 105.3 17.3 95 65-167 37-132 (167)
38 2fqp_A Hypothetical protein BP 99.5 6.6E-14 2.3E-18 101.0 10.2 75 83-163 16-92 (97)
39 1lr5_A Auxin binding protein 1 99.5 1E-13 3.6E-18 108.9 12.0 77 84-167 40-126 (163)
40 3i7d_A Sugar phosphate isomera 99.5 2.8E-13 9.6E-18 107.1 12.5 81 83-169 41-124 (163)
41 2gu9_A Tetracenomycin polyketi 99.5 3.6E-13 1.2E-17 98.2 11.6 78 83-166 19-98 (113)
42 3ht1_A REMF protein; cupin fol 99.5 2.4E-13 8.2E-18 103.8 11.0 83 83-172 37-121 (145)
43 2oa2_A BH2720 protein; 1017534 99.5 2.8E-13 9.5E-18 105.1 11.3 81 83-167 41-125 (148)
44 3fjs_A Uncharacterized protein 99.5 2.9E-13 1E-17 100.7 10.6 74 82-162 33-106 (114)
45 2xlg_A SLL1785 protein, CUCA; 99.5 1.7E-13 5.7E-18 115.3 9.9 84 81-164 39-137 (239)
46 4e2g_A Cupin 2 conserved barre 99.5 3.5E-13 1.2E-17 100.9 10.2 77 83-167 39-115 (126)
47 1o4t_A Putative oxalate decarb 99.5 8.1E-13 2.8E-17 100.7 12.1 77 82-164 54-130 (133)
48 3kgz_A Cupin 2 conserved barre 99.5 9.8E-13 3.4E-17 103.6 12.7 78 83-167 42-119 (156)
49 3jzv_A Uncharacterized protein 99.4 8.5E-13 2.9E-17 105.0 12.1 78 83-167 51-128 (166)
50 2pfw_A Cupin 2, conserved barr 99.4 4.2E-12 1.4E-16 93.5 14.7 75 84-167 33-107 (116)
51 2bnm_A Epoxidase; oxidoreducta 99.4 2E-12 7E-17 104.1 12.9 79 79-164 111-197 (198)
52 3lag_A Uncharacterized protein 99.4 2.3E-13 7.9E-18 99.1 5.8 80 81-163 13-92 (98)
53 3es1_A Cupin 2, conserved barr 99.4 7.9E-13 2.7E-17 106.0 9.4 79 83-169 77-156 (172)
54 1x82_A Glucose-6-phosphate iso 99.4 3.9E-12 1.3E-16 103.1 13.3 100 66-167 49-156 (190)
55 2b8m_A Hypothetical protein MJ 99.4 2.9E-12 1E-16 94.8 11.4 75 84-165 26-101 (117)
56 1vj2_A Novel manganese-contain 99.4 1.8E-12 6E-17 97.8 10.3 77 82-165 45-121 (126)
57 4i4a_A Similar to unknown prot 99.4 3.3E-12 1.1E-16 95.7 11.8 76 83-165 32-107 (128)
58 3cew_A Uncharacterized cupin p 99.4 2.3E-12 7.9E-17 96.6 10.5 78 82-166 23-102 (125)
59 2o8q_A Hypothetical protein; c 99.4 3.4E-12 1.2E-16 96.7 10.9 75 86-167 44-119 (134)
60 1yhf_A Hypothetical protein SP 99.4 6.9E-12 2.4E-16 92.2 12.0 74 83-165 38-111 (115)
61 2f4p_A Hypothetical protein TM 99.4 4.8E-12 1.6E-16 98.2 11.4 77 83-166 46-123 (147)
62 2vpv_A Protein MIF2, MIF2P; nu 99.4 4.8E-12 1.6E-16 100.8 11.5 73 85-163 88-161 (166)
63 1rc6_A Hypothetical protein YL 99.4 3.8E-12 1.3E-16 107.5 11.2 78 82-165 176-254 (261)
64 1y9q_A Transcriptional regulat 99.4 5.3E-12 1.8E-16 101.4 11.0 78 80-165 99-178 (192)
65 3h7j_A Bacilysin biosynthesis 99.3 5.7E-12 2E-16 105.4 11.5 80 84-170 144-224 (243)
66 2ozi_A Hypothetical protein RP 99.3 2.6E-12 9E-17 93.7 6.0 79 83-164 15-93 (98)
67 1sef_A Conserved hypothetical 99.3 9.5E-11 3.2E-15 99.7 16.4 106 47-164 147-256 (274)
68 2q30_A Uncharacterized protein 99.3 1.6E-11 5.5E-16 89.1 10.0 76 82-165 30-107 (110)
69 2ozj_A Cupin 2, conserved barr 99.3 2.7E-11 9.1E-16 89.2 11.2 71 85-164 38-108 (114)
70 1y3t_A Hypothetical protein YX 99.3 3.1E-11 1.1E-15 104.3 13.0 78 83-167 44-121 (337)
71 2d40_A Z3393, putative gentisa 99.3 2.6E-11 8.7E-16 107.2 12.6 88 65-163 249-337 (354)
72 2d40_A Z3393, putative gentisa 99.3 2E-11 7E-16 107.8 11.7 75 84-165 99-174 (354)
73 3lwc_A Uncharacterized protein 99.3 5.9E-11 2E-15 89.3 12.4 74 83-165 38-111 (119)
74 3h7j_A Bacilysin biosynthesis 99.2 5E-11 1.7E-15 99.7 10.8 73 86-165 35-108 (243)
75 1y3t_A Hypothetical protein YX 99.2 1.8E-10 6E-15 99.6 14.2 74 87-167 219-293 (337)
76 2pyt_A Ethanolamine utilizatio 99.2 8.3E-11 2.8E-15 90.2 10.1 72 84-166 56-127 (133)
77 3d82_A Cupin 2, conserved barr 99.2 4.1E-11 1.4E-15 85.7 7.7 66 79-154 27-92 (102)
78 4h7l_A Uncharacterized protein 99.2 2.1E-10 7.2E-15 90.4 12.3 72 83-166 45-118 (157)
79 2i45_A Hypothetical protein; n 99.2 4.3E-11 1.5E-15 87.2 7.6 68 86-162 29-97 (107)
80 1sfn_A Conserved hypothetical 99.2 2.5E-10 8.5E-15 95.8 12.9 76 82-164 162-238 (246)
81 3rns_A Cupin 2 conserved barre 99.2 2E-10 6.9E-15 95.1 11.1 72 84-163 152-223 (227)
82 1rc6_A Hypothetical protein YL 99.2 1.3E-10 4.3E-15 98.1 9.8 77 83-165 57-134 (261)
83 1sq4_A GLXB, glyoxylate-induce 99.1 1.3E-10 4.6E-15 99.3 9.4 77 82-165 65-143 (278)
84 1juh_A Quercetin 2,3-dioxygena 99.1 3.5E-10 1.2E-14 99.6 11.3 78 84-166 47-129 (350)
85 2opk_A Hypothetical protein; p 99.1 4.4E-10 1.5E-14 83.2 9.9 74 84-165 30-109 (112)
86 3bu7_A Gentisate 1,2-dioxygena 99.1 1.7E-09 5.7E-14 96.8 14.8 89 68-164 278-367 (394)
87 3rns_A Cupin 2 conserved barre 99.1 6E-10 2.1E-14 92.2 11.1 73 84-165 36-108 (227)
88 1sef_A Conserved hypothetical 99.1 2.5E-10 8.6E-15 97.1 9.0 78 82-165 59-137 (274)
89 4b29_A Dimethylsulfoniopropion 99.1 6E-10 2E-14 91.9 10.8 76 82-165 129-205 (217)
90 4e2q_A Ureidoglycine aminohydr 99.1 1.6E-09 5.3E-14 92.3 13.6 84 68-162 173-257 (266)
91 4axo_A EUTQ, ethanolamine util 99.1 8.2E-10 2.8E-14 86.6 10.9 72 84-166 65-136 (151)
92 3nw4_A Gentisate 1,2-dioxygena 99.1 5.6E-10 1.9E-14 99.0 10.7 77 82-165 100-177 (368)
93 1sq4_A GLXB, glyoxylate-induce 99.1 7.9E-10 2.7E-14 94.5 11.3 81 78-165 184-265 (278)
94 3bu7_A Gentisate 1,2-dioxygena 99.1 1.1E-09 3.7E-14 98.0 11.9 78 82-165 120-198 (394)
95 4e2q_A Ureidoglycine aminohydr 99.0 1.7E-09 5.9E-14 92.0 9.8 88 65-165 54-142 (266)
96 1vr3_A Acireductone dioxygenas 98.9 1.1E-08 3.8E-13 83.0 12.6 84 86-172 75-168 (191)
97 1o5u_A Novel thermotoga mariti 98.9 3.7E-09 1.3E-13 77.3 8.2 61 89-158 35-96 (101)
98 1sfn_A Conserved hypothetical 98.8 1.1E-08 3.6E-13 85.8 8.4 71 83-164 48-118 (246)
99 3ebr_A Uncharacterized RMLC-li 98.8 1.9E-08 6.3E-13 79.4 8.4 73 84-165 41-115 (159)
100 3st7_A Capsular polysaccharide 98.8 5E-08 1.7E-12 84.9 11.4 76 86-163 273-352 (369)
101 1zrr_A E-2/E-2' protein; nicke 98.8 5.7E-09 2E-13 83.9 4.8 71 98-172 93-163 (179)
102 1yfu_A 3-hydroxyanthranilate-3 98.7 1.2E-07 4.1E-12 75.4 11.7 70 81-154 32-101 (174)
103 3bcw_A Uncharacterized protein 98.7 1.9E-08 6.3E-13 76.1 6.7 67 84-157 48-114 (123)
104 1juh_A Quercetin 2,3-dioxygena 98.7 8.1E-08 2.8E-12 84.5 11.8 79 79-165 243-325 (350)
105 2q1z_B Anti-sigma factor CHRR, 98.7 4.1E-08 1.4E-12 79.7 9.1 70 85-165 125-194 (195)
106 2o1q_A Putative acetyl/propion 98.7 1.1E-08 3.6E-13 79.4 5.0 90 65-166 29-119 (145)
107 3cjx_A Protein of unknown func 98.7 4.3E-08 1.5E-12 77.8 7.8 73 84-164 42-116 (165)
108 2y0o_A Probable D-lyxose ketol 98.6 1.8E-07 6.1E-12 74.8 10.3 79 85-168 53-155 (175)
109 1dgw_Y Canavalin; duplicated s 98.6 2E-07 6.8E-12 67.2 9.5 76 128-206 4-83 (93)
110 3nw4_A Gentisate 1,2-dioxygena 98.6 6.8E-07 2.3E-11 79.2 13.6 87 66-163 260-348 (368)
111 3eqe_A Putative cystein deoxyg 98.6 1.1E-06 3.6E-11 70.1 13.5 86 84-169 68-156 (171)
112 3d0j_A Uncharacterized protein 98.5 3.1E-07 1.1E-11 70.6 8.2 66 94-161 38-105 (140)
113 2arc_A ARAC, arabinose operon 98.5 1.3E-06 4.4E-11 66.9 11.3 57 99-162 32-89 (164)
114 1zvf_A 3-hydroxyanthranilate 3 98.5 1.5E-06 5.1E-11 69.1 11.4 59 92-153 41-103 (176)
115 3o14_A Anti-ecfsigma factor, C 98.4 2.7E-06 9.2E-11 70.5 10.6 70 84-166 42-111 (223)
116 2qnk_A 3-hydroxyanthranilate 3 98.3 3.6E-06 1.2E-10 71.6 11.2 59 93-154 39-97 (286)
117 3bal_A Acetylacetone-cleaving 98.3 4.6E-07 1.6E-11 70.9 5.0 78 64-151 30-107 (153)
118 2gm6_A Cysteine dioxygenase ty 98.3 9.9E-06 3.4E-10 66.4 12.2 81 85-166 79-167 (208)
119 2pa7_A DTDP-6-deoxy-3,4-keto-h 98.2 5.4E-05 1.8E-09 58.4 13.5 96 63-163 14-111 (141)
120 3ejk_A DTDP sugar isomerase; Y 98.1 9.9E-05 3.4E-09 58.8 14.3 99 64-163 33-139 (174)
121 3eln_A Cysteine dioxygenase ty 98.1 9.4E-05 3.2E-09 60.2 13.5 84 85-168 70-161 (200)
122 3myx_A Uncharacterized protein 98.0 5.2E-05 1.8E-09 63.3 11.8 73 83-165 45-117 (238)
123 3gbg_A TCP pilus virulence reg 97.8 4.8E-05 1.6E-09 63.4 7.5 60 86-153 8-72 (276)
124 3es4_A Uncharacterized protein 97.7 0.00013 4.4E-09 54.4 8.1 62 85-153 42-103 (116)
125 1yud_A Hypothetical protein SO 97.7 0.0015 5.3E-08 51.6 13.9 132 63-203 26-165 (170)
126 3myx_A Uncharacterized protein 97.6 0.00043 1.5E-08 57.7 10.4 63 84-153 166-228 (238)
127 3uss_A Putative uncharacterize 97.5 0.0012 4.1E-08 54.1 12.0 81 85-166 73-161 (211)
128 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 97.3 0.0056 1.9E-07 49.1 12.6 68 93-161 56-132 (185)
129 2ixk_A DTDP-4-dehydrorhamnose 97.2 0.0053 1.8E-07 49.1 11.9 68 93-161 57-133 (184)
130 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 97.1 0.0038 1.3E-07 50.5 10.5 66 93-161 68-139 (197)
131 1wlt_A 176AA long hypothetical 97.1 0.013 4.4E-07 47.4 13.5 98 63-161 41-151 (196)
132 3ryk_A DTDP-4-dehydrorhamnose 97.1 0.0067 2.3E-07 49.4 11.6 70 93-162 78-157 (205)
133 1vrb_A Putative asparaginyl hy 96.9 0.0055 1.9E-07 53.5 10.5 71 90-161 145-249 (342)
134 1dzr_A DTDP-4-dehydrorhamnose 96.9 0.021 7.1E-07 45.6 12.9 65 93-157 55-129 (183)
135 3o14_A Anti-ecfsigma factor, C 96.9 0.0026 9E-08 52.3 7.7 64 86-162 147-210 (223)
136 3bb6_A Uncharacterized protein 96.9 0.0043 1.5E-07 46.8 8.2 71 94-165 23-99 (127)
137 3kmh_A D-lyxose isomerase; cup 96.9 0.009 3.1E-07 49.5 10.7 76 85-160 106-203 (246)
138 2vec_A YHAK, pirin-like protei 96.9 0.0079 2.7E-07 50.5 10.7 70 87-162 66-139 (256)
139 4gjz_A Lysine-specific demethy 96.9 0.0028 9.7E-08 51.0 7.5 68 87-155 125-226 (235)
140 2c0z_A NOVW; isomerase, epimer 96.8 0.023 7.7E-07 46.6 12.7 69 93-161 63-141 (216)
141 1oi6_A PCZA361.16; epimerase, 96.8 0.023 7.9E-07 46.2 12.5 65 93-157 55-129 (205)
142 1upi_A DTDP-4-dehydrorhamnose 96.7 0.038 1.3E-06 45.5 13.3 69 93-161 74-152 (225)
143 1tq5_A Protein YHHW; bicupin, 96.6 0.022 7.4E-07 47.4 10.9 70 87-161 43-115 (242)
144 4hn1_A Putative 3-epimerase in 96.5 0.033 1.1E-06 45.2 11.4 70 93-162 52-131 (201)
145 3d8c_A Hypoxia-inducible facto 96.4 0.015 5.1E-07 50.8 9.6 73 90-163 187-295 (349)
146 3rcq_A Aspartyl/asparaginyl be 96.1 0.04 1.4E-06 44.5 9.6 70 86-161 103-177 (197)
147 2xdv_A MYC-induced nuclear ant 96.0 0.032 1.1E-06 50.3 9.4 65 89-154 142-223 (442)
148 3al5_A HTYW5, JMJC domain-cont 96.0 0.028 9.4E-07 48.8 8.7 72 89-163 170-271 (338)
149 2qnk_A 3-hydroxyanthranilate 3 95.9 0.029 1E-06 47.6 8.1 40 107-152 227-266 (286)
150 2qdr_A Uncharacterized protein 95.8 0.18 6.3E-06 42.3 12.6 84 63-163 75-159 (303)
151 1e5r_A Proline oxidase; oxidor 95.7 0.014 4.8E-07 49.9 5.6 76 85-164 91-175 (290)
152 1eyb_A Homogentisate 1,2-dioxy 95.7 0.077 2.6E-06 48.0 10.6 63 98-166 170-232 (471)
153 2qjv_A Uncharacterized IOLB-li 95.7 0.098 3.3E-06 44.2 10.6 79 84-166 152-247 (270)
154 3k2o_A Bifunctional arginine d 95.1 0.097 3.3E-06 45.5 9.2 66 90-155 176-281 (336)
155 4diq_A Lysine-specific demethy 95.1 0.13 4.6E-06 46.8 10.3 70 88-158 166-256 (489)
156 3kv5_D JMJC domain-containing 94.8 0.074 2.5E-06 48.5 7.8 66 90-155 270-361 (488)
157 2yu1_A JMJC domain-containing 94.8 0.11 3.9E-06 46.9 8.8 67 90-156 200-292 (451)
158 3m3i_A Putative uncharacterize 94.7 1.5 5.1E-05 35.9 14.6 149 42-203 16-210 (225)
159 3kv4_A PHD finger protein 8; e 94.4 0.18 6E-06 45.6 9.2 67 90-156 235-327 (447)
160 2oyz_A UPF0345 protein VPA0057 94.2 0.39 1.3E-05 34.1 8.7 56 90-152 28-83 (94)
161 2p17_A Pirin-like protein; GK1 94.2 0.4 1.4E-05 40.4 10.5 92 62-161 17-112 (277)
162 3k3o_A PHF8, PHD finger protei 94.0 0.15 5.1E-06 45.0 7.6 66 90-155 151-242 (371)
163 3hqx_A UPF0345 protein aciad03 93.8 0.39 1.3E-05 35.1 8.3 79 64-152 21-99 (111)
164 3kv9_A JMJC domain-containing 93.8 0.17 5.9E-06 44.9 7.7 66 90-155 179-270 (397)
165 3loi_A Putative uncharacterize 93.1 2.6 8.8E-05 33.1 15.7 129 63-203 24-168 (172)
166 3pua_A GRC5, PHD finger protei 92.9 0.3 1E-05 43.3 7.8 66 90-155 178-269 (392)
167 1qwr_A Mannose-6-phosphate iso 92.7 0.65 2.2E-05 39.8 9.5 56 85-149 251-306 (319)
168 1xru_A 4-deoxy-L-threo-5-hexos 92.5 1.9 6.5E-05 36.5 11.8 85 80-168 175-266 (282)
169 1pmi_A PMI, phosphomannose iso 92.5 0.91 3.1E-05 40.8 10.4 74 85-164 357-437 (440)
170 1j1l_A Pirin; beta sandwich, c 92.4 0.65 2.2E-05 39.4 9.0 70 86-161 41-114 (290)
171 3pur_A Lysine-specific demethy 91.7 0.35 1.2E-05 44.4 6.8 62 93-154 304-390 (528)
172 3eo6_A Protein of unknown func 91.6 0.63 2.2E-05 33.7 6.8 55 91-152 42-96 (106)
173 2rg4_A Uncharacterized protein 91.5 0.87 3E-05 36.8 8.4 78 87-165 105-204 (216)
174 2wfp_A Mannose-6-phosphate iso 91.4 0.6 2E-05 41.3 7.9 57 84-149 323-379 (394)
175 3dl3_A Tellurite resistance pr 91.2 1.2 4E-05 33.0 8.1 67 96-165 27-97 (119)
176 1ywk_A 4-deoxy-L-threo-5-hexos 90.5 2.2 7.5E-05 36.2 10.1 81 84-168 179-266 (289)
177 1znp_A Hypothetical protein AT 90.3 5.1 0.00017 30.8 13.2 98 63-164 19-123 (154)
178 1tq5_A Protein YHHW; bicupin, 90.0 2.5 8.5E-05 34.8 10.0 68 83-162 158-225 (242)
179 1zx5_A Mannosephosphate isomer 89.7 1.7 5.8E-05 36.9 9.0 68 84-164 229-297 (300)
180 2vec_A YHAK, pirin-like protei 88.7 3.4 0.00012 34.3 10.0 71 83-161 180-250 (256)
181 2p17_A Pirin-like protein; GK1 88.6 4.2 0.00014 34.1 10.5 56 82-145 164-220 (277)
182 1j1l_A Pirin; beta sandwich, c 88.3 4.5 0.00015 34.1 10.6 75 82-162 166-240 (290)
183 1qwr_A Mannose-6-phosphate iso 87.6 2.1 7E-05 36.7 8.2 21 131-151 159-179 (319)
184 2qjv_A Uncharacterized IOLB-li 86.8 9 0.00031 32.1 11.4 70 85-162 29-107 (270)
185 2pqq_A Putative transcriptiona 86.2 1.8 6.1E-05 31.0 6.1 53 87-140 28-80 (149)
186 1xe7_A YML079WP, hypothetical 85.3 13 0.00044 29.8 14.1 131 63-203 42-198 (203)
187 4ev0_A Transcription regulator 83.4 3.4 0.00011 31.7 7.0 53 88-141 23-75 (216)
188 3fx3_A Cyclic nucleotide-bindi 82.8 3.7 0.00013 32.1 7.1 52 88-140 35-86 (237)
189 3ryp_A Catabolite gene activat 82.8 4.3 0.00015 30.9 7.3 53 88-141 20-72 (210)
190 2ypd_A Probable JMJC domain-co 82.7 1.3 4.5E-05 39.1 4.6 38 129-166 292-329 (392)
191 3gyd_A CNMP-BD protein, cyclic 82.2 4 0.00014 31.1 6.9 53 87-140 62-114 (187)
192 3iwz_A CAP-like, catabolite ac 82.0 4.2 0.00014 31.5 7.1 53 88-141 35-87 (230)
193 3d0s_A Transcriptional regulat 81.8 4.7 0.00016 31.2 7.3 51 89-140 31-81 (227)
194 3dn7_A Cyclic nucleotide bindi 81.6 6.2 0.00021 29.7 7.8 53 88-141 31-83 (194)
195 3b02_A Transcriptional regulat 81.5 3.7 0.00013 31.2 6.5 50 91-141 3-52 (195)
196 3mdp_A Cyclic nucleotide-bindi 80.6 3.3 0.00011 29.3 5.6 54 87-141 29-85 (142)
197 3e97_A Transcriptional regulat 80.5 3.9 0.00013 31.8 6.4 53 87-140 29-81 (231)
198 3dv8_A Transcriptional regulat 80.3 5.8 0.0002 30.4 7.3 52 88-140 27-78 (220)
199 1ywk_A 4-deoxy-L-threo-5-hexos 79.9 7.9 0.00027 32.8 8.3 66 90-161 62-130 (289)
200 2oz6_A Virulence factor regula 79.7 7.7 0.00026 29.4 7.8 53 88-141 14-66 (207)
201 2z69_A DNR protein; beta barre 79.5 1.7 5.6E-05 31.4 3.6 53 87-140 35-87 (154)
202 1zyb_A Transcription regulator 79.3 3.5 0.00012 32.4 5.8 53 87-140 43-95 (232)
203 1ft9_A Carbon monoxide oxidati 79.3 11 0.00037 29.1 8.7 69 87-161 23-91 (222)
204 3kcc_A Catabolite gene activat 79.2 6 0.00021 31.7 7.3 53 88-141 70-122 (260)
205 1o5l_A Transcriptional regulat 78.5 4 0.00014 31.6 5.8 53 87-140 22-74 (213)
206 2gau_A Transcriptional regulat 78.4 3.3 0.00011 32.3 5.3 53 87-140 33-85 (232)
207 3e6c_C CPRK, cyclic nucleotide 77.6 6.2 0.00021 31.2 6.8 54 87-141 32-85 (250)
208 2fmy_A COOA, carbon monoxide o 77.3 16 0.00055 28.0 9.1 69 87-161 27-95 (220)
209 3idb_B CAMP-dependent protein 76.9 9.8 0.00034 27.7 7.4 52 87-140 61-112 (161)
210 2zcw_A TTHA1359, transcription 76.9 6.6 0.00023 29.9 6.6 71 90-163 8-84 (202)
211 2bgc_A PRFA; bacterial infecti 75.9 8.9 0.00031 30.0 7.3 70 89-161 20-96 (238)
212 3la7_A Global nitrogen regulat 74.0 12 0.00041 29.5 7.6 54 86-140 42-95 (243)
213 1zx5_A Mannosephosphate isomer 73.3 2.5 8.7E-05 35.8 3.5 45 107-151 118-179 (300)
214 1xru_A 4-deoxy-L-threo-5-hexos 66.7 14 0.00047 31.2 6.5 50 106-161 78-130 (282)
215 3pna_A CAMP-dependent protein 65.2 19 0.00066 25.8 6.6 48 87-140 61-108 (154)
216 2wfp_A Mannose-6-phosphate iso 64.9 4.6 0.00016 35.6 3.5 22 130-151 240-261 (394)
217 1xsq_A Ureidoglycolate hydrola 63.1 28 0.00096 26.9 7.3 67 97-163 68-139 (168)
218 3bpz_A Potassium/sodium hyperp 62.9 12 0.0004 28.6 5.2 48 87-140 95-142 (202)
219 2bdr_A Ureidoglycolate hydrola 62.0 34 0.0012 26.6 7.7 66 97-162 70-140 (175)
220 2xxz_A Lysine-specific demethy 61.6 7.8 0.00027 33.5 4.2 31 129-159 278-308 (332)
221 2ptm_A Hyperpolarization-activ 60.8 14 0.00048 28.0 5.3 49 87-140 94-142 (198)
222 2qcs_B CAMP-dependent protein 60.1 27 0.00092 27.9 7.2 53 87-140 180-233 (291)
223 3ocp_A PRKG1 protein; serine/t 58.6 40 0.0014 23.5 7.2 47 88-140 47-93 (139)
224 4ava_A Lysine acetyltransferas 57.8 16 0.00055 30.1 5.5 51 88-140 37-87 (333)
225 3dkw_A DNR protein; CRP-FNR, H 56.2 3.2 0.00011 32.1 0.8 53 88-141 33-85 (227)
226 3tnp_B CAMP-dependent protein 56.0 33 0.0011 29.7 7.4 52 87-140 168-219 (416)
227 3dkq_A PKHD-type hydroxylase S 55.1 48 0.0016 27.0 7.8 63 87-153 101-181 (243)
228 3ukn_A Novel protein similar t 54.9 17 0.00059 27.8 4.9 49 87-141 98-146 (212)
229 1pmi_A PMI, phosphomannose iso 54.3 9 0.00031 34.2 3.5 22 131-152 267-288 (440)
230 1vp6_A CNBD, cyclic-nucleotide 53.1 17 0.00058 25.3 4.3 45 88-140 35-79 (138)
231 3shr_A CGMP-dependent protein 51.6 21 0.00071 28.8 5.1 52 88-140 181-233 (299)
232 4f8a_A Potassium voltage-gated 51.2 50 0.0017 23.4 6.8 49 88-142 51-99 (160)
233 3of1_A CAMP-dependent protein 49.2 18 0.00061 27.9 4.2 47 88-140 31-77 (246)
234 3avr_A Lysine-specific demethy 48.3 18 0.00063 33.1 4.6 31 129-159 337-367 (531)
235 2qcs_B CAMP-dependent protein 47.4 42 0.0014 26.7 6.4 48 87-140 62-109 (291)
236 4ask_A Lysine-specific demethy 47.4 20 0.00067 32.7 4.6 88 67-158 221-341 (510)
237 1yll_A PA5104, conserved hypot 44.9 32 0.0011 27.3 5.0 33 107-145 141-174 (200)
238 2d93_A RAP guanine nucleotide 44.8 29 0.00099 24.1 4.4 48 87-140 39-87 (134)
239 3g7d_A PHPD; non heme Fe(II) d 43.0 1E+02 0.0034 26.9 8.0 39 111-151 359-397 (443)
240 3of1_A CAMP-dependent protein 42.3 44 0.0015 25.5 5.6 48 88-140 149-196 (246)
241 3shr_A CGMP-dependent protein 41.7 51 0.0018 26.4 6.0 48 87-140 62-109 (299)
242 1o7f_A CAMP-dependent RAP1 gua 37.8 63 0.0021 27.8 6.3 53 87-141 65-120 (469)
243 1s4c_A Protein HI0227; double- 37.0 71 0.0024 23.8 5.7 54 98-151 60-133 (155)
244 1o7f_A CAMP-dependent RAP1 gua 34.0 61 0.0021 27.9 5.6 46 90-140 364-409 (469)
245 1tc3_C Protein (TC3 transposas 33.9 58 0.002 17.9 3.9 29 179-207 18-46 (51)
246 1wgp_A Probable cyclic nucleot 33.5 8.6 0.00029 27.0 -0.1 48 90-140 32-82 (137)
247 4f7z_A RAP guanine nucleotide 32.6 57 0.0019 31.6 5.6 33 104-140 377-409 (999)
248 1wy3_A Villin; structural prot 31.1 33 0.0011 19.5 2.2 21 184-204 2-22 (35)
249 1und_A Advillin, P92; actin bi 31.0 33 0.0011 19.7 2.2 23 182-204 2-24 (37)
250 2dkz_A Hypothetical protein LO 28.6 58 0.002 22.3 3.5 32 174-206 45-76 (84)
251 3tnp_B CAMP-dependent protein 27.5 52 0.0018 28.4 4.0 53 87-140 290-348 (416)
252 3g7d_A PHPD; non heme Fe(II) d 27.4 3.1E+02 0.01 23.9 9.6 68 137-204 171-265 (443)
253 4din_B CAMP-dependent protein 27.1 56 0.0019 27.7 4.1 50 90-140 274-324 (381)
254 4din_B CAMP-dependent protein 26.3 52 0.0018 27.9 3.7 48 87-140 153-200 (381)
255 2qdr_A Uncharacterized protein 25.8 99 0.0034 25.9 5.0 48 84-149 216-264 (303)
256 1pcq_O Groes protein; chaperon 23.3 70 0.0024 22.4 3.2 20 126-145 51-70 (97)
257 4f7z_A RAP guanine nucleotide 21.9 1.5E+02 0.0052 28.5 6.4 54 86-140 64-119 (999)
258 3nnf_A CURA; non-HAEM Fe(II)/a 21.8 92 0.0031 26.7 4.2 22 130-151 234-255 (344)
259 3cf6_E RAP guanine nucleotide 20.5 1.4E+02 0.0047 28.0 5.6 47 89-140 58-104 (694)
260 1eyb_A Homogentisate 1,2-dioxy 20.4 89 0.0031 28.1 4.0 51 89-149 347-398 (471)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=100.00 E-value=1.8e-48 Score=320.60 Aligned_cols=194 Identities=38% Similarity=0.651 Sum_probs=180.8
Q ss_pred CCCCCCcceeccCCCCC-CCCCCCCCCCCCCCCCCceEEec-CCCCCCccccCCceEEEeeccccCcccCcceEEEEEEE
Q 028365 15 SSNAMVNDFCVADLKLS-DSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDL 92 (210)
Q Consensus 15 ~d~~~~~d~c~a~~~~~-~~~~g~pck~~~~~~~~df~f~~-l~~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l 92 (210)
+||||||||||||+.++ +++||+||| |+.++++||+|++ ++.++++.+..|+.++.++..++|+++++++++.++++
T Consensus 1 ~~~~~~~d~c~~~~~~~~~~~~g~~c~-~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~~l 79 (201)
T 1fi2_A 1 TDPDPLQDFCVADLDGKAVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDF 79 (201)
T ss_dssp CCCCCSSSCCCBCCCTTSCCCSSCCBC-CGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEEEE
T ss_pred CCCcccceeEEecCCCCcccccCcccc-cCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEEEE
Confidence 69999999999999987 999999999 9999999999998 88777777889999999999999999999999999999
Q ss_pred eCCccccceecCCCCEEEEEEeCEEEEEEEecCC---CeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEecCCCC
Q 028365 93 AKGGVIPIHTHPAASEILLVVHGCITAGFISSSA---NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNP 169 (210)
Q Consensus 93 ~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~---~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~p 169 (210)
.||++.++|||+++.|++||++|++++++.++ + ++.++..|++||+++||+|..|++.|.|++++.++.+++++++
T Consensus 80 ~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~-~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p 158 (201)
T 1fi2_A 80 APGGTNPPHIHPRATEIGMVMKGELLVGILGS-LDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNP 158 (201)
T ss_dssp CTTCEEEEEECTTCCEEEEEEESEEEEEEECC-GGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCC
T ss_pred CCCCCCCCeECCCCCEEEEEEeCEEEEEEEcC-CCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCC
Confidence 99999999999988999999999999999764 3 6755669999999999999999999999999999999999999
Q ss_pred CceechHhHHhhc--CCHHHHHHhcCCCHHHHHHHhhhhCCCC
Q 028365 170 GLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKAILGGTG 210 (210)
Q Consensus 170 g~~~i~~~~f~s~--~p~~vla~~f~~~~~~v~~l~~~~~~~~ 210 (210)
+.+.++.++|++. +++++|+++|+++++++++|+++|++.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~~~~~ 201 (201)
T 1fi2_A 159 GIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGGS 201 (201)
T ss_dssp CCEEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHSTTCC
T ss_pred CeEehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhhcCCC
Confidence 9999998899863 9999999999999999999999997753
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=100.00 E-value=8.4e-33 Score=251.81 Aligned_cols=153 Identities=12% Similarity=0.158 Sum_probs=138.5
Q ss_pred EEecCC--CCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCe
Q 028365 51 VFSGLG--VAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANT 128 (210)
Q Consensus 51 ~f~~l~--~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~ 128 (210)
.|+ +. ..++..++.||+++.+++.+||+|++++|++++++|.||+|++|||||+|+||+||++|+++++++++++++
T Consensus 288 ~~N-i~~p~~~d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~ 366 (466)
T 3kgl_A 288 TDN-LDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDR 366 (466)
T ss_dssp EEE-TTCGGGEEEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCE
T ss_pred ccc-ccCcccCCcccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcE
Confidence 455 33 344566889999999999999999999999999999999999999999999999999999999999985567
Q ss_pred EEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEecCCCCCceech--HhHHhhcCCHHHHHHhcCCCHHHHHHHhhhh
Q 028365 129 VYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITD--FALFANNLSSQLVEQTTFLDDATVKRLKAIL 206 (210)
Q Consensus 129 ~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg~~~i~--~~~f~s~~p~~vla~~f~~~~~~v~~l~~~~ 206 (210)
++..+|++||+++||+|++|++ |.|++++.++++|++++|+...++ .++|. .+|++||+++|+++.+++++|+++.
T Consensus 367 ~f~~~l~~GDV~v~P~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~-~lP~eVla~aF~v~~~~v~~Lk~~q 444 (466)
T 3kgl_A 367 VFDGQVSQGQLLSIPQGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLR-GLPLEVISNGYQISLEEARRVKFNT 444 (466)
T ss_dssp EEEEEEETTCEEEECTTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGG-GSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred EEEeEecCCcEEEECCCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhh-hCCHHHHHHHhCcCHHHHHHHHhcc
Confidence 8989999999999999999988 779999999999999999998886 46676 6999999999999999999999863
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.98 E-value=1.2e-31 Score=245.77 Aligned_cols=153 Identities=18% Similarity=0.198 Sum_probs=137.5
Q ss_pred eEEecCC--CCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCC
Q 028365 50 FVFSGLG--VAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAN 127 (210)
Q Consensus 50 f~f~~l~--~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~ 127 (210)
..++ +. ..++..++.||+++.+++.+||+|+++||++++++|.||+|++|||||+|+||+||++|++++++++++++
T Consensus 322 l~~N-i~~p~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~ 400 (496)
T 3ksc_A 322 LRLN-IGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGN 400 (496)
T ss_dssp CEEE-CSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSC
T ss_pred hhcc-ccccccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCc
Confidence 3555 44 33466788999999999999999999999999999999999999999999999999999999999998557
Q ss_pred eEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEecCCCCCceech--HhHHhhcCCHHHHHHhcCCCHHHHHHHhhh
Q 028365 128 TVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITD--FALFANNLSSQLVEQTTFLDDATVKRLKAI 205 (210)
Q Consensus 128 ~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg~~~i~--~~~f~s~~p~~vla~~f~~~~~~v~~l~~~ 205 (210)
+.+.++|++||+++||+|++|++.| +++++.+++++++++|+...++ .++|. .+|++||+++|+++.+++++|+++
T Consensus 401 ~~f~~~l~~GDV~v~P~G~~H~~~a-~~e~~~~l~f~~s~np~~~~LaG~~sv~~-~~p~eVLa~aF~v~~~~v~~Lk~~ 478 (496)
T 3ksc_A 401 TVFDGELEAGRALTVPQNYAVAAKS-LSDRFSYVAFKTNDRAGIARLAGTSSVIN-NLPLDVVAATFNLQRNEARQLKSN 478 (496)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEEE-CSSEEEEEEEESSTTCCEEESSSTTCTTT-TSCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEEEEEecCCeEEEECCCCEEEEEe-CCCCEEEEEEECCCCCccccccchhhhhh-hCCHHHHHHHHCcCHHHHHHHHhc
Confidence 8888899999999999999999877 4788999999988999988875 45665 699999999999999999999985
No 4
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.98 E-value=7.7e-32 Score=245.42 Aligned_cols=149 Identities=17% Similarity=0.165 Sum_probs=136.9
Q ss_pred CCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcC
Q 028365 57 VAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKK 136 (210)
Q Consensus 57 ~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~ 136 (210)
..+++.++.||+++.+++.+||+|++++|+++++++.||+|++|||||+|+||+||++|+++++++++++++++.++|++
T Consensus 295 ~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~ 374 (465)
T 3qac_A 295 SKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSR 374 (465)
T ss_dssp TTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecC
Confidence 44567788999999999999999999999999999999999999999999999999999999999998667889889999
Q ss_pred CCEEEECCCCeeEEEeCCCCCEEEEEEecCCCCCceech--HhHHhhcCCHHHHHHhcCCCHHHHHHHhhhhC
Q 028365 137 GDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITD--FALFANNLSSQLVEQTTFLDDATVKRLKAILG 207 (210)
Q Consensus 137 GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg~~~i~--~~~f~s~~p~~vla~~f~~~~~~v~~l~~~~~ 207 (210)
||+++||+|++|++. .|++++.+++.+++++|+.+.++ .++|. .+|++||+++|+++++++++|+++..
T Consensus 375 GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~-~ip~eVla~aF~v~~e~v~~Lk~~~~ 445 (465)
T 3qac_A 375 GQLVVVPQNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIR-SLPIDVVSNIYQISREEAFGLKFNRP 445 (465)
T ss_dssp TCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHH-HSCHHHHHHHHTCCHHHHHHHHHSCC
T ss_pred CeEEEECCCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhh-hCCHHHHHHHhCCCHHHHHHHHhccC
Confidence 999999999999885 57889999999999999998886 56776 59999999999999999999998643
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.97 E-value=2.8e-31 Score=242.15 Aligned_cols=148 Identities=12% Similarity=0.162 Sum_probs=137.2
Q ss_pred CCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcC
Q 028365 57 VAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKK 136 (210)
Q Consensus 57 ~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~ 136 (210)
..+++.++.||+++.+++.+||+|++++++++++++.||++++||||++|+||.||++|+++++++++++.+.+..+|++
T Consensus 294 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~ 373 (459)
T 2e9q_A 294 ERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVRE 373 (459)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeC
Confidence 45566789999999999999999999999999999999999999999999999999999999999998667888788999
Q ss_pred CCEEEECCCCeeEEEeCCCCCEEEEEEecCCCCCceech--HhHHhhcCCHHHHHHhcCCCHHHHHHHhhhh
Q 028365 137 GDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITD--FALFANNLSSQLVEQTTFLDDATVKRLKAIL 206 (210)
Q Consensus 137 GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg~~~i~--~~~f~s~~p~~vla~~f~~~~~~v~~l~~~~ 206 (210)
||+++||+|.+|+++| +++++.+++++++++++.+.++ .++|+ .+|++||+++|+++++++++|+++.
T Consensus 374 GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~-~~p~~Vla~af~v~~~~v~~l~~~~ 443 (459)
T 2e9q_A 374 GQVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMR-MLPLGVLSNMYRISREEAQRLKYGQ 443 (459)
T ss_dssp TCEEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHH-HSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred CcEEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHH-hCCHHHHHHHHCcCHHHHHHHHhcC
Confidence 9999999999999999 7889999999999999998886 66776 5999999999999999999999864
No 6
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.97 E-value=5e-31 Score=242.02 Aligned_cols=153 Identities=16% Similarity=0.244 Sum_probs=134.4
Q ss_pred eEEecCC--CCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCC
Q 028365 50 FVFSGLG--VAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAN 127 (210)
Q Consensus 50 f~f~~l~--~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~ 127 (210)
+.|+ +. ..+++.++.||+++.+++.+||+|++++|++++++|.||++++|||||+|+||+||++|+++++++++++.
T Consensus 358 l~~N-i~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~ 436 (531)
T 3fz3_A 358 LKEN-IGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGD 436 (531)
T ss_dssp CEEE-CCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSC
T ss_pred eeec-cCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCc
Confidence 4666 54 34567789999999999999999999999999999999999999999999999999999999999998556
Q ss_pred eEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEe-cCCCCCceech--HhHHhhcCCHHHHHHhcCCCHHHHHHHhh
Q 028365 128 TVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSF-NSPNPGLQITD--FALFANNLSSQLVEQTTFLDDATVKRLKA 204 (210)
Q Consensus 128 ~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f-~s~~pg~~~i~--~~~f~s~~p~~vla~~f~~~~~~v~~l~~ 204 (210)
+.++.+|++||+++||+|++|+.. .+++.+.++ +| ++++|++..++ .++|. .+|++||+++|+++++++++|++
T Consensus 437 ~v~~~~L~~GDV~v~P~G~~H~~~-ag~e~l~fl-aF~ss~np~~~~LaG~~svf~-~lP~eVLa~aF~v~~e~v~kLk~ 513 (531)
T 3fz3_A 437 AILDQEVQQGQLFIVPQNHGVIQQ-AGNQGFEYF-AFKTEENAFINTLAGRTSFLR-ALPDEVLANAYQISREQARQLKY 513 (531)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEE-EEEEEEEEE-EEESSTTCCEEESSSTTCHHH-HSCHHHHHHHHTCCHHHHHHHHH
T ss_pred EEEEEEecCCeEEEECCCCeEEEe-cCCCCEEEE-EEecCCCCcceeccchhHHHH-hCCHHHHHHHhCcCHHHHHHHHh
Confidence 778899999999999999999765 465566665 66 45889988886 67787 49999999999999999999998
Q ss_pred hh
Q 028365 205 IL 206 (210)
Q Consensus 205 ~~ 206 (210)
+.
T Consensus 514 ~~ 515 (531)
T 3fz3_A 514 NR 515 (531)
T ss_dssp SC
T ss_pred cC
Confidence 64
No 7
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.97 E-value=1.2e-29 Score=232.29 Aligned_cols=148 Identities=19% Similarity=0.227 Sum_probs=135.1
Q ss_pred CCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcC
Q 028365 57 VAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKK 136 (210)
Q Consensus 57 ~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~ 136 (210)
..+++.++.||+++.+++.+||+|+++++++++++++||++++||||+++.||+||++|+++++++++++++.+...|++
T Consensus 310 ~~~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~ 389 (476)
T 1fxz_A 310 SSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQE 389 (476)
T ss_dssp SCCSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcC
Confidence 34566789999999999999999999999999999999999999999999999999999999999987456778778999
Q ss_pred CCEEEECCCCeeEEEeCCCCCEEEEEEecCCCCCceech--HhHHhhcCCHHHHHHhcCCCHHHHHHHhhhh
Q 028365 137 GDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITD--FALFANNLSSQLVEQTTFLDDATVKRLKAIL 206 (210)
Q Consensus 137 GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg~~~i~--~~~f~s~~p~~vla~~f~~~~~~v~~l~~~~ 206 (210)
||+++||+|++|++.| +++.+.+++.+.+.+|+...++ .++|+ .+|++||+++|+++++++++|++++
T Consensus 390 GDv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~-~~p~~Vla~af~~~~~~v~~l~~~~ 459 (476)
T 1fxz_A 390 GRVLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLN-ALPEEVIQHTFNLKSQQARQIKNNN 459 (476)
T ss_dssp TCEEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGG-GSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred CCEEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHH-hCCHHHHHHHhCcCHHHHHHHHhhC
Confidence 9999999999999999 8888888888768899988886 67777 4999999999999999999999875
No 8
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.97 E-value=9.9e-30 Score=231.38 Aligned_cols=159 Identities=16% Similarity=0.138 Sum_probs=134.0
Q ss_pred CCCCceEEecCCCCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEec
Q 028365 45 VTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS 124 (210)
Q Consensus 45 ~~~~df~f~~l~~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~ 124 (210)
.....++|+ |....+..++.||+++.+++.+||+|++++++++++++.||++++|||||+|+||+||++|+++++++++
T Consensus 242 ~~~~~~~~~-l~~~~p~~~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~ 320 (445)
T 2cav_A 242 LSSQDKPFN-LRSRDPIYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGL 320 (445)
T ss_dssp ----CCCEE-TTSSCCSEESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC
T ss_pred CCCccccee-ccccCCCccCCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeC
Confidence 344578899 6555555578899999999999999999999999999999999999999999999999999999999997
Q ss_pred CC--------Ce--EEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEe-cCCCCCceech---HhHHhhcCCHHHHHH
Q 028365 125 SA--------NT--VYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSF-NSPNPGLQITD---FALFANNLSSQLVEQ 190 (210)
Q Consensus 125 ~~--------~~--~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f-~s~~pg~~~i~---~~~f~s~~p~~vla~ 190 (210)
++ ++ .++.+|++||+++||+|.+|++.|. +++.+++.+ ++++++.+.++ .++|. .+|++||++
T Consensus 321 ~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~-~~p~~vla~ 397 (445)
T 2cav_A 321 EQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIR-QIPRQVSDL 397 (445)
T ss_dssp -----------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGG-GSCHHHHHH
T ss_pred CCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhh-hCCHHHHHH
Confidence 42 13 6888999999999999999999997 466666544 45688888776 56666 599999999
Q ss_pred hcCCCHHHHHHHhhhhC
Q 028365 191 TTFLDDATVKRLKAILG 207 (210)
Q Consensus 191 ~f~~~~~~v~~l~~~~~ 207 (210)
+|+++.+++++|++...
T Consensus 398 af~v~~~~v~~l~~~~~ 414 (445)
T 2cav_A 398 TFPGSGEEVEELLENQK 414 (445)
T ss_dssp HSSSCHHHHHHHHHHCC
T ss_pred HHCcCHHHHHHHHhcCC
Confidence 99999999999998653
No 9
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.97 E-value=1.1e-29 Score=229.43 Aligned_cols=158 Identities=15% Similarity=0.124 Sum_probs=137.6
Q ss_pred CCCceEEecCCCCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecC
Q 028365 46 TADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS 125 (210)
Q Consensus 46 ~~~df~f~~l~~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~ 125 (210)
....++|+ |....+..+..+|+++.+++.+||+|++++++++++++.||++++||||++|+||.||++|++++++++++
T Consensus 211 ~~~~~~~~-l~~~~p~~~~~~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~ 289 (416)
T 1uij_A 211 SSEDEPFN-LRSRNPIYSNNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIK 289 (416)
T ss_dssp GCSSSCEE-TTSSCCSEECSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC
T ss_pred CCccccee-ccccCCCccCCCceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCC
Confidence 35678899 65555555778889999999999999999999999999999999999999999999999999999999883
Q ss_pred C-----------C--eEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEec-CCCCCceech---HhHHhhcCCHHHH
Q 028365 126 A-----------N--TVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFN-SPNPGLQITD---FALFANNLSSQLV 188 (210)
Q Consensus 126 ~-----------~--~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~-s~~pg~~~i~---~~~f~s~~p~~vl 188 (210)
+ . +.+...|++||+++||+|++|++.|. +++.+++.+. +++++.+.++ .++|. .+|++||
T Consensus 290 g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~-~~p~~vl 366 (416)
T 1uij_A 290 EQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVR-QIERQVQ 366 (416)
T ss_dssp ------------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGG-GSCHHHH
T ss_pred CccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHH-hCCHHHH
Confidence 2 1 47788999999999999999999997 6788887775 4589988876 56665 6999999
Q ss_pred HHhcCCCHHHHHHHhhhhC
Q 028365 189 EQTTFLDDATVKRLKAILG 207 (210)
Q Consensus 189 a~~f~~~~~~v~~l~~~~~ 207 (210)
+++|+++++++++|+++..
T Consensus 367 a~af~~~~~~v~~l~~~~~ 385 (416)
T 1uij_A 367 ELAFPGSAQDVERLLKKQR 385 (416)
T ss_dssp HHHSSSCHHHHHHHTTSCC
T ss_pred HHHHCcCHHHHHHHHhcCC
Confidence 9999999999999998643
No 10
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.96 E-value=2.6e-29 Score=231.15 Aligned_cols=148 Identities=18% Similarity=0.207 Sum_probs=134.9
Q ss_pred CCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcC
Q 028365 57 VAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKK 136 (210)
Q Consensus 57 ~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~ 136 (210)
..+++.++.||+++.+++.+||+|+++++++++++++||++++||||+++.||+||++|+++++++++++++.+...|++
T Consensus 344 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~ 423 (510)
T 3c3v_A 344 RSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQE 423 (510)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcC
Confidence 44567789999999999999999999999999999999999999999999999999999999999987556778778999
Q ss_pred CCEEEECCCCeeEEEeCCCCCEEEEEEecCCCCCceech--HhHHhhcCCHHHHHHhcCCCHHHHHHHhhhh
Q 028365 137 GDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITD--FALFANNLSSQLVEQTTFLDDATVKRLKAIL 206 (210)
Q Consensus 137 GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg~~~i~--~~~f~s~~p~~vla~~f~~~~~~v~~l~~~~ 206 (210)
||+++||+|++|++.| +++++.+++.+.+.+++...++ .++|+ .+|++||+++|+++++++++|++++
T Consensus 424 GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~-~lp~eVla~aF~v~~e~v~~L~~~~ 493 (510)
T 3c3v_A 424 GHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVID-NLPEEVVANSYGLPREQARQLKNNN 493 (510)
T ss_dssp TCEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTT-TSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred CcEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHH-hCCHHHHHHHHCcCHHHHHHHHhhC
Confidence 9999999999999999 8888888877767899998886 67777 5999999999999999999999875
No 11
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.96 E-value=3.8e-29 Score=226.94 Aligned_cols=159 Identities=14% Similarity=0.145 Sum_probs=137.2
Q ss_pred CCCCCceEEecCCCCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEe
Q 028365 44 MVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFIS 123 (210)
Q Consensus 44 ~~~~~df~f~~l~~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~ 123 (210)
......++|+ |....+..+..||+++.+++.+||+|++++++++++++.||++++|||||+|+||.||++|++++++++
T Consensus 226 g~~~~~~~~~-l~~~~p~~~~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~ 304 (434)
T 2ea7_A 226 ELSSQDEPFN-LRNSKPIYSNKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVG 304 (434)
T ss_dssp CTTCSSSCEE-TTSSCCSEEETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEE
T ss_pred CCCCccccee-eccCCCceeCCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEe
Confidence 3445678899 655555557889999999999999999999999999999999999999999999999999999999998
Q ss_pred cCC----------C--eEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEe-cCCCCCceech---HhHHhhcCCHHH
Q 028365 124 SSA----------N--TVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSF-NSPNPGLQITD---FALFANNLSSQL 187 (210)
Q Consensus 124 ~~~----------~--~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f-~s~~pg~~~i~---~~~f~s~~p~~v 187 (210)
+++ . +.+..+|++||+++||+|.+|++.|. +++.+++.+ ++++++.+.++ .++|. .+|++|
T Consensus 305 ~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~-~~p~~v 381 (434)
T 2ea7_A 305 LSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMS-EIPTEV 381 (434)
T ss_dssp EEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGG-GSCHHH
T ss_pred cCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhh-hCCHHH
Confidence 732 1 26778999999999999999999997 577777755 45578888777 45665 699999
Q ss_pred HHHhcCCCHHHHHHHhhhh
Q 028365 188 VEQTTFLDDATVKRLKAIL 206 (210)
Q Consensus 188 la~~f~~~~~~v~~l~~~~ 206 (210)
|+++|+++.+++++|++..
T Consensus 382 la~af~v~~~~v~~l~~~~ 400 (434)
T 2ea7_A 382 LEVSFPASGKKVEKLIKKQ 400 (434)
T ss_dssp HHHHSSSCHHHHHHHHTTC
T ss_pred HHHHHCcCHHHHHHHHhcC
Confidence 9999999999999999864
No 12
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.96 E-value=3.1e-29 Score=230.46 Aligned_cols=148 Identities=18% Similarity=0.262 Sum_probs=135.6
Q ss_pred CCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcC
Q 028365 57 VAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKK 136 (210)
Q Consensus 57 ~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~ 136 (210)
..+++.++.||+++.+++.+||+|+++++++++++++||++++||||+++.|++||++|+++++++++++++.+...|++
T Consensus 339 ~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~ 418 (493)
T 2d5f_A 339 SRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRR 418 (493)
T ss_dssp GGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred CCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcC
Confidence 45677789999999999999999999999999999999999999999999999999999999999987446777678999
Q ss_pred CCEEEECCCCeeEEEeCCCCCEEEEEEecCCCCCceechHhHHhhcCCHHHHHHhcCCCHHHHHHHhhhhC
Q 028365 137 GDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKAILG 207 (210)
Q Consensus 137 GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg~~~i~~~~f~s~~p~~vla~~f~~~~~~v~~l~~~~~ 207 (210)
||+++||+|.+|++.| +++++.+++++++++|+.+.+ .++|+ .+|++||+++|+++++++++|+++..
T Consensus 419 GDv~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~-~~p~eVla~aF~v~~~~v~~l~~~~~ 486 (493)
T 2d5f_A 419 GQLLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFR-AIPSEVLSNSYNLGQSQVRQLKYQGN 486 (493)
T ss_dssp TCEEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHH-HSCHHHHHHHHTCCHHHHHHHHHSSC
T ss_pred CCEEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHH-hCCHHHHHHHHCcCHHHHHHHHhcCC
Confidence 9999999999999998 568899999999999999988 67787 49999999999999999999998753
No 13
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.95 E-value=5.5e-28 Score=218.19 Aligned_cols=156 Identities=15% Similarity=0.090 Sum_probs=132.3
Q ss_pred CceEEecCCCCCCccccCCceEEEeecccc-CcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCC
Q 028365 48 DDFVFSGLGVAGNTTSIINAAVTPAFVAQF-PAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA 126 (210)
Q Consensus 48 ~df~f~~l~~~~~~~~~~gg~~~~~~~~~~-P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~ 126 (210)
..++|+ |....+..++.+|+++.+++.+| |+|++++++++++++.||++++|||||+|+||+||++|++++++++++.
T Consensus 226 ~~~~~n-l~~~~p~~~n~~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~ 304 (418)
T 3s7i_A 226 ITNPIN-LREGEPDLSNNFGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRK 304 (418)
T ss_dssp CCCCEE-TTCSCCSEEETTEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEE
T ss_pred CCcccc-cccCCCceeCCCCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCC
Confidence 478899 54544444677889999999999 9999999999999999999999999999999999999999999998732
Q ss_pred C------------------------eEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEe-cCCCCCceechH---hH
Q 028365 127 N------------------------TVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSF-NSPNPGLQITDF---AL 178 (210)
Q Consensus 127 ~------------------------~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f-~s~~pg~~~i~~---~~ 178 (210)
. +.+...|++||+++||+|++||+.|.+ ++.+++.. ++++++.+.++. ++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv 382 (418)
T 3s7i_A 305 EQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNV 382 (418)
T ss_dssp C-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBH
T ss_pred ccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhh
Confidence 1 567889999999999999999998854 56655432 466888888764 56
Q ss_pred HhhcCCHHHHHHhcCCCHHHHHHHhhhhC
Q 028365 179 FANNLSSQLVEQTTFLDDATVKRLKAILG 207 (210)
Q Consensus 179 f~s~~p~~vla~~f~~~~~~v~~l~~~~~ 207 (210)
|. .+|++||+++|+++.+++++|++...
T Consensus 383 ~~-~~~~evla~af~v~~~~v~~L~~~q~ 410 (418)
T 3s7i_A 383 ID-QIEKQAKDLAFPGSGEQVEKLIKNQK 410 (418)
T ss_dssp HH-HSCHHHHHHHSSSCHHHHHHHHHTCC
T ss_pred hh-cCCHHHHHHHhCCCHHHHHHHHhcCC
Confidence 65 69999999999999999999998654
No 14
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.95 E-value=8.6e-28 Score=193.95 Aligned_cols=151 Identities=10% Similarity=0.111 Sum_probs=125.5
Q ss_pred CceEEecCCCCCCccccCCceEEEeec-----cccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEE
Q 028365 48 DDFVFSGLGVAGNTTSIINAAVTPAFV-----AQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFI 122 (210)
Q Consensus 48 ~df~f~~l~~~~~~~~~~gg~~~~~~~-----~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv 122 (210)
+.|+|+ +.+..+.....||+++.++. ..+|++++ +++.+++++||++.+|| |+++.|++||++|+++++++
T Consensus 2 ~p~~f~-~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~ 77 (178)
T 1dgw_A 2 NPYLFR-SNKFLTLFKNQHGSLRLLQRFNEDTEKLENLRD--YRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLV 77 (178)
T ss_dssp CTTEEC-GGGEEEEEEETTEEEEEECCTTSSCGGGGGGTT--EEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEE
T ss_pred CCceec-hhhcccceEcCCCEEEEEcccCCcchhcCCcCc--EEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEE
Confidence 468888 66655545788999999877 77888875 79999999999999999 88999999999999999998
Q ss_pred ecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCC-CEEEEEEe-cCCCCCceec---h-----HhHHhhcCCHHHHHHhc
Q 028365 123 SSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD-GALGFVSF-NSPNPGLQIT---D-----FALFANNLSSQLVEQTT 192 (210)
Q Consensus 123 ~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~-~a~~~~~f-~s~~pg~~~i---~-----~~~f~s~~p~~vla~~f 192 (210)
++++++ ...|++||+++||+|.+|+++|.|++ ++.+++++ .+++||.+.. + .++|+ ++|++||+++|
T Consensus 78 ~~~~~~--~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~-~~p~~vla~af 154 (178)
T 1dgw_A 78 NPDGRD--TYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS-AFSKNFLEASY 154 (178)
T ss_dssp ETTEEE--EEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG-GSCHHHHHHHH
T ss_pred eCCCcE--EEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhh-hCCHHHHHHHH
Confidence 763344 45999999999999999999999986 77777664 4567874432 1 35665 69999999999
Q ss_pred CCCHHHHHHHhhh
Q 028365 193 FLDDATVKRLKAI 205 (210)
Q Consensus 193 ~~~~~~v~~l~~~ 205 (210)
+++++++++|+..
T Consensus 155 ~v~~~~~~~l~~~ 167 (178)
T 1dgw_A 155 DSPYDEIEQTLLQ 167 (178)
T ss_dssp TSCHHHHHHHTTS
T ss_pred CcCHHHHHHHhcC
Confidence 9999999999943
No 15
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.94 E-value=2.3e-26 Score=206.37 Aligned_cols=144 Identities=15% Similarity=0.116 Sum_probs=122.8
Q ss_pred CCCCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEec------CCCe
Q 028365 55 LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS------SANT 128 (210)
Q Consensus 55 l~~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~------~~~~ 128 (210)
+....+..+..+|+++.+++.+ ++++++++++.||++++||||++|.||.||++|+++++++++ ++++
T Consensus 215 l~~~~p~~~n~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~ 288 (397)
T 2phl_A 215 LSKQDNTIGNEFGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYE 288 (397)
T ss_dssp -----CEEEETTEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEE
T ss_pred ccccCCcccCCCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCce
Confidence 5555555578899999999987 789999999999999999999999999999999999999987 4568
Q ss_pred EEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEe-cCCCCCceech---HhHHhhcCC-----HHHHHHhcCCCHHHH
Q 028365 129 VYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSF-NSPNPGLQITD---FALFANNLS-----SQLVEQTTFLDDATV 199 (210)
Q Consensus 129 ~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f-~s~~pg~~~i~---~~~f~s~~p-----~~vla~~f~~~~~~v 199 (210)
.++.+|++||+++||+|.+|+++|.+ ++.+++.+ ++++++.+.++ .++|. .+| ++||+++|+++++++
T Consensus 289 ~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~-~~p~~~~~~eVla~af~v~~~~v 365 (397)
T 2phl_A 289 SYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVIS-SIGRALDGKDVLGLTFSGSGDEV 365 (397)
T ss_dssp EEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHH-HHHTSTTHHHHHHHHSSSCHHHH
T ss_pred EEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHh-hCCCccchHHHHHHHhCcCHHHH
Confidence 89999999999999999999999985 67776644 45589888776 56776 588 999999999999999
Q ss_pred HHHhhhhC
Q 028365 200 KRLKAILG 207 (210)
Q Consensus 200 ~~l~~~~~ 207 (210)
++|+++..
T Consensus 366 ~~l~~~~~ 373 (397)
T 2phl_A 366 MKLINKQS 373 (397)
T ss_dssp HHHHTTCC
T ss_pred HHHHhcCC
Confidence 99998753
No 16
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.92 E-value=1.1e-23 Score=185.47 Aligned_cols=160 Identities=21% Similarity=0.189 Sum_probs=137.1
Q ss_pred CCCCCCCceEEecCCCCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEE
Q 028365 42 PAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGF 121 (210)
Q Consensus 42 ~~~~~~~df~f~~l~~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~v 121 (210)
+.....++|+|+.++.++ ..+..||+++.+....+|++++ +++.+++++||+..++|||+++.|++||++|++++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~-~~~~~gg~~~~~~~~~~~~~~~--~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v 270 (361)
T 2vqa_A 194 QTAKIEVPHTHNLLGQQP-LVSLGGNELRLASAKEFPGSFN--MTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTV 270 (361)
T ss_dssp CCCBCCSCCEEECTTSCC-SEEETTEEEEEECTTTCTTSTT--CEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEE
T ss_pred cCCCCCcceEeccccCCC-cccCCCceEEEEehhhCcCccc--ceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEE
Confidence 345567889998555443 4467899999999999998875 6788999999999999999988999999999999999
Q ss_pred EecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEecCCCCCceechHhHHhhcCCHHHHHHhcCCCHHHHHH
Q 028365 122 ISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKR 201 (210)
Q Consensus 122 v~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg~~~i~~~~f~s~~p~~vla~~f~~~~~~v~~ 201 (210)
+++ +++..+..|++||++++|+|..|++.|.+++++.+++++...+++...++. |.+.+|++||+++|+++++++++
T Consensus 271 ~~~-~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~vl~~~f~~~~~~~~~ 347 (361)
T 2vqa_A 271 FAS-EGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLST--WLASNPSSVLGNTFQISPELTKK 347 (361)
T ss_dssp ECS-TTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHHH--HHHTSCHHHHHHHHTCCHHHHTT
T ss_pred EcC-CCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHHH--HhhhCCHHHHHHHHCcCHHHHHh
Confidence 876 565345599999999999999999999999999999999988888887765 34469999999999999999999
Q ss_pred HhhhhC
Q 028365 202 LKAILG 207 (210)
Q Consensus 202 l~~~~~ 207 (210)
|++...
T Consensus 348 l~~~~~ 353 (361)
T 2vqa_A 348 LPVQDT 353 (361)
T ss_dssp SCCSCC
T ss_pred hhccCC
Confidence 987643
No 17
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.91 E-value=3.2e-24 Score=194.63 Aligned_cols=152 Identities=14% Similarity=0.142 Sum_probs=125.5
Q ss_pred CCceEEecCCC-CCCccccCCceEEEee--ccccCcccCcc-eEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEE
Q 028365 47 ADDFVFSGLGV-AGNTTSIINAAVTPAF--VAQFPAVNGLG-LSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFI 122 (210)
Q Consensus 47 ~~df~f~~l~~-~~~~~~~~gg~~~~~~--~~~~P~l~~~g-is~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv 122 (210)
.+.|.|+ +.+ -.......||+++.++ ..+.|.|++++ +++++++++||++++|| |++++||+||++|+++++++
T Consensus 20 ~~p~~f~-~~~~~~~~~~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v 97 (434)
T 2ea7_A 20 NNPFYFN-SDRWFRTLYRNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLV 97 (434)
T ss_dssp GCTTEEC-TTTSEEEEEEETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEE
T ss_pred CCCeEEe-ccccccceEEcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEE
Confidence 4678888 544 2233467899999973 35668888887 99999999999999999 77899999999999999998
Q ss_pred ecCCCeEEEEEEcCCCEEEECCCCeeEEEeCC-CCCEEEEEEec-CCCCCce---echH-----hHHhhcCCHHHHHHhc
Q 028365 123 SSSANTVYVKTLKKGDIMIFPQGLLHFQVNSG-ADGALGFVSFN-SPNPGLQ---ITDF-----ALFANNLSSQLVEQTT 192 (210)
Q Consensus 123 ~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g-~~~a~~~~~f~-s~~pg~~---~i~~-----~~f~s~~p~~vla~~f 192 (210)
++ ++..+..|++||++++|+|..||++|.| ++++++++++. +++||.. .++. ++|+ ++|++||+++|
T Consensus 98 ~~--~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~-~~~~~vLa~af 174 (434)
T 2ea7_A 98 NP--DSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLR-GFSKNILEASF 174 (434)
T ss_dssp CS--SCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGG-GSCHHHHHHHH
T ss_pred eC--CCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhh-cCCHHHHHHHh
Confidence 75 3344669999999999999999999998 78999998875 5666643 2332 3555 69999999999
Q ss_pred CCCHHHHHHHh
Q 028365 193 FLDDATVKRLK 203 (210)
Q Consensus 193 ~~~~~~v~~l~ 203 (210)
+++.+++++|+
T Consensus 175 ~v~~~~v~~l~ 185 (434)
T 2ea7_A 175 DSDFKEINRVL 185 (434)
T ss_dssp TSCHHHHHHHH
T ss_pred CCCHHHHHhhh
Confidence 99999999999
No 18
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.91 E-value=6e-24 Score=193.34 Aligned_cols=155 Identities=10% Similarity=0.091 Sum_probs=125.4
Q ss_pred CCCceEEecCCCCCCccccCCceEEEeec--cccCcccCcc-eEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEE
Q 028365 46 TADDFVFSGLGVAGNTTSIINAAVTPAFV--AQFPAVNGLG-LSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFI 122 (210)
Q Consensus 46 ~~~df~f~~l~~~~~~~~~~gg~~~~~~~--~~~P~l~~~g-is~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv 122 (210)
..+.|+|+ ...........+|++..++. .+.|.+++++ +++++++++||++++|| |++++||+||++|+++++++
T Consensus 45 ~~~p~vf~-~~~~~~~i~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v 122 (445)
T 2cav_A 45 QNNPYLFR-SNKFLTLFKNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLV 122 (445)
T ss_dssp -CCTTEEC-GGGEEEEEEETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEE
T ss_pred CCCCeEEc-hhhcCceEEcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEE
Confidence 35678888 44322223457899998754 4556888877 99999999999999999 66899999999999999999
Q ss_pred ecCCCeEEEEEEcCCCEEEECCCCeeEEEeCC-CCCEEEEEEec-CCCCCce---ech-----HhHHhhcCCHHHHHHhc
Q 028365 123 SSSANTVYVKTLKKGDIMIFPQGLLHFQVNSG-ADGALGFVSFN-SPNPGLQ---ITD-----FALFANNLSSQLVEQTT 192 (210)
Q Consensus 123 ~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g-~~~a~~~~~f~-s~~pg~~---~i~-----~~~f~s~~p~~vla~~f 192 (210)
++ +++ .+..+++||++++|+|..||++|.| +++++++++++ +++||.+ .++ .++|+ ++|++||+++|
T Consensus 123 ~~-~~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~-~~~~~vLa~af 199 (445)
T 2cav_A 123 NP-DGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS-AFSKNFLEASY 199 (445)
T ss_dssp ET-TEE-EEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG-GSCHHHHHHHH
T ss_pred eC-CCC-EEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhh-cCCHHHHHHHh
Confidence 86 333 5679999999999999999999998 79999999887 5567643 232 25665 69999999999
Q ss_pred CCCHHHHHHHhhh
Q 028365 193 FLDDATVKRLKAI 205 (210)
Q Consensus 193 ~~~~~~v~~l~~~ 205 (210)
+++++++++|+++
T Consensus 200 ~v~~~~v~~l~~~ 212 (445)
T 2cav_A 200 DSPYDEIEQTLLQ 212 (445)
T ss_dssp TSCHHHHHHHTTS
T ss_pred CCCHHHHHhhhcc
Confidence 9999999999953
No 19
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.91 E-value=4.4e-24 Score=192.82 Aligned_cols=155 Identities=15% Similarity=0.179 Sum_probs=124.4
Q ss_pred CCceEEecCCCCCCccccCCceEEEee--ccccCcccCcc-eEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEe
Q 028365 47 ADDFVFSGLGVAGNTTSIINAAVTPAF--VAQFPAVNGLG-LSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFIS 123 (210)
Q Consensus 47 ~~df~f~~l~~~~~~~~~~gg~~~~~~--~~~~P~l~~~g-is~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~ 123 (210)
.+.|.|+..++........||+++.++ ....+.|++++ +++++++++||++++|| |++++|++||++|++++++++
T Consensus 8 ~~p~~f~~~~~~~~~~~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~ 86 (416)
T 1uij_A 8 NNPFYFRSSNSFQTLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVN 86 (416)
T ss_dssp SCTTEECGGGSEEEEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEEC
T ss_pred CCCeEecccccccceEEcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEE
Confidence 456777722222233467899999963 34557888887 99999999999999999 668899999999999999998
Q ss_pred cCCCeEEEEEEcCCCEEEECCCCeeEEEeCC-CCCEEEEEEec-CCCCCce---echH-----hHHhhcCCHHHHHHhcC
Q 028365 124 SSANTVYVKTLKKGDIMIFPQGLLHFQVNSG-ADGALGFVSFN-SPNPGLQ---ITDF-----ALFANNLSSQLVEQTTF 193 (210)
Q Consensus 124 ~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g-~~~a~~~~~f~-s~~pg~~---~i~~-----~~f~s~~p~~vla~~f~ 193 (210)
+ ++..+..+++||+++||+|..||++|.| ++++++++++. +++||.. .++. ++|+ ++|++||+++|+
T Consensus 87 ~--~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~-~~~~~vLa~af~ 163 (416)
T 1uij_A 87 N--DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQ-GFSHNILETSFH 163 (416)
T ss_dssp S--SCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGG-GSCHHHHHHHHT
T ss_pred C--CCCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhh-cCCHHHHHHHhC
Confidence 6 3334669999999999999999999995 99999999886 5666643 2322 3555 699999999999
Q ss_pred CCHHHHHHHh-hh
Q 028365 194 LDDATVKRLK-AI 205 (210)
Q Consensus 194 ~~~~~v~~l~-~~ 205 (210)
++++++++|+ +.
T Consensus 164 v~~~~v~~l~~~~ 176 (416)
T 1uij_A 164 SEFEEINRVLFGE 176 (416)
T ss_dssp SCHHHHHHHHTCT
T ss_pred cCHHHHHhhhhcc
Confidence 9999999999 54
No 20
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.91 E-value=4.5e-24 Score=194.64 Aligned_cols=142 Identities=16% Similarity=0.272 Sum_probs=118.5
Q ss_pred ccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEE------------
Q 028365 63 SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVY------------ 130 (210)
Q Consensus 63 ~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~------------ 130 (210)
...+|.+..++. +.|.|+++|+++++++++||++++||||+ ++||+||++|++.+++++++..+.|
T Consensus 42 ~se~G~~~~~~~-~~~~l~~~gvs~~r~~i~pggl~~Ph~h~-a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~ 119 (459)
T 2e9q_A 42 EAEAGFTEVWDQ-DNDEFQCAGVNMIRHTIRPKGLLLPGFSN-APKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGS 119 (459)
T ss_dssp EETTEEEEECCT-TSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEEECCC-------
T ss_pred ecCCcEEEecCC-CChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEeeEEEEEEEeCCCcchhccchhhcccccc
Confidence 567887777665 55999999999999999999999999995 8999999999999999977222122
Q ss_pred --------EEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEecCCC---C-----Cceec--------------------
Q 028365 131 --------VKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPN---P-----GLQIT-------------------- 174 (210)
Q Consensus 131 --------~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~---p-----g~~~i-------------------- 174 (210)
...|++||+++||+|++||++|.|++++++++++++.+ + ..+.+
T Consensus 120 ~~~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ 199 (459)
T 2e9q_A 120 AFKDQHQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRK 199 (459)
T ss_dssp CCCEEECCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC-------
T ss_pred ccccccceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhcccccccc
Confidence 45999999999999999999999999999999998555 1 11222
Q ss_pred ------hHhHHhhcCCHHHHHHhcCCCHHHHHHHhhhhC
Q 028365 175 ------DFALFANNLSSQLVEQTTFLDDATVKRLKAILG 207 (210)
Q Consensus 175 ------~~~~f~s~~p~~vla~~f~~~~~~v~~l~~~~~ 207 (210)
+.++|. ++++++|+++|+++.++++||++...
T Consensus 200 ~~~~~~~~nif~-gf~~evLa~aF~v~~~~v~kL~~~~~ 237 (459)
T 2e9q_A 200 GSSGEKSGNIFS-GFADEFLEEAFQIDGGLVRKLKGEDD 237 (459)
T ss_dssp -----CCCCTTT-TSCHHHHHHHHTCCHHHHHHHHTTTC
T ss_pred ccccccccchhh-cCCHHHHHhhcCCCHHHHHhhhhccc
Confidence 236776 69999999999999999999997654
No 21
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.91 E-value=6.2e-24 Score=190.60 Aligned_cols=153 Identities=13% Similarity=0.120 Sum_probs=125.9
Q ss_pred CCCceEEecCCC-CCCccccCCceEEEe--eccccCcccCcc-eEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEE
Q 028365 46 TADDFVFSGLGV-AGNTTSIINAAVTPA--FVAQFPAVNGLG-LSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGF 121 (210)
Q Consensus 46 ~~~df~f~~l~~-~~~~~~~~gg~~~~~--~~~~~P~l~~~g-is~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~v 121 (210)
..+.|+|. ..+ -.......||.++.+ ...+.|.|++++ +++++++++||++++|||| +++||+||++|++++++
T Consensus 10 ~~~p~~f~-~~~~~~~~~~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~-~a~ei~yVl~G~~~v~~ 87 (397)
T 2phl_A 10 QDNPFYFN-SDNSWNTLFKNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQA-DAELLLVVRSGSAILVL 87 (397)
T ss_dssp -CCTTEEC-GGGTEEEEEEETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEE-SEEEEEEEEESEEEEEE
T ss_pred CCCCcEec-cchhccceEEcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEec-CCCeEEEEEeeeEEEEE
Confidence 35678887 433 223447889999997 445669999998 9999999999999999999 78999999999999999
Q ss_pred EecCCCeEEEEEEcCCCE------EEECCCCeeEEEeCC-CCCEEEEEEecCCC-CCc--eech-----HhHHhhcCCHH
Q 028365 122 ISSSANTVYVKTLKKGDI------MIFPQGLLHFQVNSG-ADGALGFVSFNSPN-PGL--QITD-----FALFANNLSSQ 186 (210)
Q Consensus 122 v~~~~~~~~~~~l~~GDv------~~~P~g~~H~~~N~g-~~~a~~~~~f~s~~-pg~--~~i~-----~~~f~s~~p~~ 186 (210)
+++ +++ .+..|++||+ ++||+|++||++|.| ++++.+++.+++.+ |.. +.++ .++|. ++|++
T Consensus 88 v~~-~~~-~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~-~~~~~ 164 (397)
T 2phl_A 88 VKP-DDR-REYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQ-EFSKH 164 (397)
T ss_dssp EET-TTE-EEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGG-GSCHH
T ss_pred EeC-CCc-EEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhh-cCCHH
Confidence 997 454 4679999999 999999999999999 78999998887443 322 2222 23554 79999
Q ss_pred HHHHhcCCCHHHHHHHh
Q 028365 187 LVEQTTFLDDATVKRLK 203 (210)
Q Consensus 187 vla~~f~~~~~~v~~l~ 203 (210)
||+++|+++.+++++|+
T Consensus 165 vLa~af~v~~~~v~~l~ 181 (397)
T 2phl_A 165 ILEASFNSKFEEINRVL 181 (397)
T ss_dssp HHHHHHTSCHHHHHHHH
T ss_pred HHHHHhCCCHHHHHhhh
Confidence 99999999999999999
No 22
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.90 E-value=2.2e-23 Score=190.98 Aligned_cols=140 Identities=11% Similarity=0.158 Sum_probs=117.5
Q ss_pred ccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCe-E------------
Q 028365 63 SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANT-V------------ 129 (210)
Q Consensus 63 ~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~-~------------ 129 (210)
...+|.+..++.. .|.|+++|+++++++++||++++||||+ ++||+||++|++.++++++ +++ +
T Consensus 27 ~se~G~~e~~~~~-~~~l~~~gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~g~~g~v~p-g~~et~~~~~~~~~~~~ 103 (476)
T 1fxz_A 27 ESEGGLIETWNPN-NKPFQCAGVALSRCTLNRNALRRPSYTN-GPQEIYIQQGKGIFGMIYP-GCPSTFEEPQQPQQRGQ 103 (476)
T ss_dssp EETTEEEEECCTT-SHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECT-TCCCC------------
T ss_pred ecCCceEEeeCCC-ChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEecEEEEEEEcC-CCcchhhcccccccccc
Confidence 5678888776664 4999999999999999999999999996 7999999999999999987 322 1
Q ss_pred ---------EEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEecCCCC--------Cceec------------------
Q 028365 130 ---------YVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNP--------GLQIT------------------ 174 (210)
Q Consensus 130 ---------~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~p--------g~~~i------------------ 174 (210)
....|++||+++||+|++||++|.|+++++++++++..++ ..+.+
T Consensus 104 ~~~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~ 183 (476)
T 1fxz_A 104 SSRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGH 183 (476)
T ss_dssp ------CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC-----
T ss_pred ccccccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCccccccccccccccc
Confidence 1459999999999999999999999999999999985553 11222
Q ss_pred --------------hHhHHhhcCCHHHHHHhcCCCHHHHHHHhhhh
Q 028365 175 --------------DFALFANNLSSQLVEQTTFLDDATVKRLKAIL 206 (210)
Q Consensus 175 --------------~~~~f~s~~p~~vla~~f~~~~~~v~~l~~~~ 206 (210)
+.++|. ++++++|+++|+++.++++||++..
T Consensus 184 ~~~~~~~~~~~~~~~~~if~-gf~~~vLa~af~v~~~~~~kl~~~~ 228 (476)
T 1fxz_A 184 QSQKGKHQQEEENEGGSILS-GFTLEFLEHAFSVDKQIAKNLQGEN 228 (476)
T ss_dssp --------------CCCGGG-GSCHHHHHHHHTCCHHHHHHHSCC-
T ss_pred cccccccccccccccchhhh-cCCHHHHHhhhCCCHHHHHhhhccc
Confidence 235775 7999999999999999999999654
No 23
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.90 E-value=2.6e-23 Score=189.35 Aligned_cols=140 Identities=16% Similarity=0.303 Sum_probs=119.0
Q ss_pred ccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEE------------
Q 028365 63 SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVY------------ 130 (210)
Q Consensus 63 ~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~------------ 130 (210)
...||.+..++.++ +.|+++|+++++++++|||+.+|||| +++||+||++|++.++++.++..++|
T Consensus 29 ~se~G~~e~~d~~~-~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~ 106 (465)
T 3qac_A 29 QAERGLTEVWDSNE-QEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGED 106 (465)
T ss_dssp EETTEEEEECCTTS-HHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTCCCCC------------
T ss_pred eCCCcEEEEECCCC-hhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCCCceeecchhccccccc
Confidence 46799999998765 68999999999999999999999999 89999999999999999976222322
Q ss_pred ------------------------EEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEecCCCCC---------ceech--
Q 028365 131 ------------------------VKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPG---------LQITD-- 175 (210)
Q Consensus 131 ------------------------~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg---------~~~i~-- 175 (210)
...+++||++++|+|+.||+.|.|++++++++++++.|.. .+.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG~ 186 (465)
T 3qac_A 107 ERIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAGK 186 (465)
T ss_dssp ------------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSSC
T ss_pred cccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecCC
Confidence 4589999999999999999999999999999999865432 22332
Q ss_pred ----------------------HhHHhhcCCHHHHHHhcCCCHHHHHHHhhh
Q 028365 176 ----------------------FALFANNLSSQLVEQTTFLDDATVKRLKAI 205 (210)
Q Consensus 176 ----------------------~~~f~s~~p~~vla~~f~~~~~~v~~l~~~ 205 (210)
.++|. ++++++|+++|+++.++++||.+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~ni~s-gF~~e~La~Af~v~~~~~~kl~~~ 237 (465)
T 3qac_A 187 PQQEHSGEHQFSRESRRGERNTGNIFR-GFETRLLAESFGVSEEIAQKLQAE 237 (465)
T ss_dssp CCCSCC--------------CCCCGGG-GSCHHHHHHHHTCCHHHHHHHHTT
T ss_pred Cccccccccccccccccccccccchhh-cCCHHHHHHHhCCCHHHHHHhhhc
Confidence 24665 799999999999999999999865
No 24
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.90 E-value=3.6e-23 Score=186.72 Aligned_cols=150 Identities=15% Similarity=0.208 Sum_probs=118.5
Q ss_pred CceEEecCCCCCCccccCCceEEEee-----ccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEE
Q 028365 48 DDFVFSGLGVAGNTTSIINAAVTPAF-----VAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFI 122 (210)
Q Consensus 48 ~df~f~~l~~~~~~~~~~gg~~~~~~-----~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv 122 (210)
+.|.|+ .++-........|.++.+. ...+|+|++. ++++++++|+++.+|| |++|+|++||++|++.++++
T Consensus 5 ~p~~f~-~~~f~~~~~se~G~i~~l~~f~~~s~~l~~l~~~--~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V 80 (418)
T 3s7i_A 5 NPFYFP-SRRFSTRYGNQNGRIRVLQRFDQRSRQFQNLQNH--RIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVA 80 (418)
T ss_dssp CTTEEC-GGGEEEEEECSSEEEEEECCHHHHCGGGGGGTTC--EEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEE
T ss_pred CCcccc-cccccceEEcCCcEEEEecccCCcchhcccccce--EEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEE
Confidence 567776 3332223467899999984 3577888774 6778899999999999 88999999999999999999
Q ss_pred ecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCC-EEEEE-EecCCCCCceec--------hHhHHhhcCCHHHHHHhc
Q 028365 123 SSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADG-ALGFV-SFNSPNPGLQIT--------DFALFANNLSSQLVEQTT 192 (210)
Q Consensus 123 ~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~-a~~~~-~f~s~~pg~~~i--------~~~~f~s~~p~~vla~~f 192 (210)
++ ++.+.+.|++||+++||+|.+||+.|.|..+ +.+++ .+++++||.+.. ..++|. ++|++||+++|
T Consensus 81 ~~--~~~~~~~l~~GDv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~-gf~~evLa~af 157 (418)
T 3s7i_A 81 NG--NNRKSFNLDEGHALRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQ-GFSRNTLEAAF 157 (418)
T ss_dssp CS--SCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGG-GSCHHHHHHHH
T ss_pred ec--CCEEEEEecCCCEEEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhh-cCCHHHHHHHH
Confidence 96 3445779999999999999999999988654 44443 346667876432 124564 79999999999
Q ss_pred CCCHHHHHHHhh
Q 028365 193 FLDDATVKRLKA 204 (210)
Q Consensus 193 ~~~~~~v~~l~~ 204 (210)
+++++++++|++
T Consensus 158 ~v~~~~v~kl~~ 169 (418)
T 3s7i_A 158 NAEFNEIRRVLL 169 (418)
T ss_dssp TSCHHHHHHHTT
T ss_pred CcCHHHHHhhhc
Confidence 999999999984
No 25
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.89 E-value=9.1e-22 Score=173.31 Aligned_cols=150 Identities=20% Similarity=0.243 Sum_probs=125.7
Q ss_pred ceEEecCCCCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCe
Q 028365 49 DFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANT 128 (210)
Q Consensus 49 df~f~~l~~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~ 128 (210)
.|.|+ +....+. ...||+++.++..+||.+.+ +++.++.++||++.++|||+++.|++||++|+++++++++ +++
T Consensus 20 ~~~~~-~~~~~~~-~~~~G~~~~~~~~~~p~~~~--~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~-~g~ 94 (361)
T 2vqa_A 20 AFTYA-FSKTPLV-LYDGGTTKQVGTYNFPVSKG--MAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSP-EGK 94 (361)
T ss_dssp CSEEC-GGGSCCE-EETTEEEEEESTTTCTTCCS--CEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECT-TSC
T ss_pred ceEEE-cccCCce-ecCCceEEEeChhhCccccc--eeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeC-CCc
Confidence 37777 6666554 45899999999999999876 5889999999999999999878999999999999999886 443
Q ss_pred EEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEecCCCCC---ceechHhHHhhcCCHHHHHHhcCCCHHHHHHHhhh
Q 028365 129 VYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPG---LQITDFALFANNLSSQLVEQTTFLDDATVKRLKAI 205 (210)
Q Consensus 129 ~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg---~~~i~~~~f~s~~p~~vla~~f~~~~~~v~~l~~~ 205 (210)
.....|++||+++||+|..|+++|.+++++.++.+++..++. .+... ..+. ++|.++|+++|+++.+.++++++.
T Consensus 95 ~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~~-~~~~-~~p~~vLa~~~~v~~~~~~~l~~~ 172 (361)
T 2vqa_A 95 VEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSVT-DWLS-HTPIAWVEENLGWTAAQVAQLPKK 172 (361)
T ss_dssp EEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEHH-HHHH-TSCHHHHHHHHTCCHHHHTTSCSS
T ss_pred EEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceecHh-HHHH-hCCHHHHHHHhCcCHHHHHhcccc
Confidence 234599999999999999999999999999999998876654 33333 3343 699999999999999999988754
No 26
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.88 E-value=1.7e-22 Score=185.33 Aligned_cols=138 Identities=14% Similarity=0.227 Sum_probs=116.0
Q ss_pred ccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEE------------
Q 028365 63 SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVY------------ 130 (210)
Q Consensus 63 ~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~------------ 130 (210)
...||.+..++ .+.|+|+++|++++++++.||++.+|||| +|+|++||++|++.++++.++..+.|
T Consensus 25 ~se~G~~e~~~-~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~ 102 (496)
T 3ksc_A 25 ESEGGLIETWN-PNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGR 102 (496)
T ss_dssp EETTEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTCCCC-------------
T ss_pred CCCCcEEEecc-ccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCCCccchhhhhccccccc
Confidence 45677666655 68899999999999999999999999999 89999999999999999987313333
Q ss_pred --------EEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEecCCCCCc--------eech-------------------
Q 028365 131 --------VKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGL--------QITD------------------- 175 (210)
Q Consensus 131 --------~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg~--------~~i~------------------- 175 (210)
.+.|++||+++||+|++||+.|.|+++++++++|+..++.- +.++
T Consensus 103 ~~~d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~ 182 (496)
T 3ksc_A 103 RYRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQE 182 (496)
T ss_dssp --CCCCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC-------
T ss_pred ccccchheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCcccccccccccccccc
Confidence 34999999999999999999999999999999997555321 1111
Q ss_pred -----HhHHhhcCCHHHHHHhcCCCHHHHHHHh
Q 028365 176 -----FALFANNLSSQLVEQTTFLDDATVKRLK 203 (210)
Q Consensus 176 -----~~~f~s~~p~~vla~~f~~~~~~v~~l~ 203 (210)
.++|. +|++++|+.||+++.++++||.
T Consensus 183 ~~~~~~ni~s-gF~~e~La~Af~v~~e~~~kl~ 214 (496)
T 3ksc_A 183 QENEGNNIFS-GFKRDFLEDAFNVNRHIVDRLQ 214 (496)
T ss_dssp ----CCSGGG-GSCHHHHHHHHTCCHHHHHHHT
T ss_pred ccccCCCchh-hcCHHHHHHHHCCCHHHHHHHH
Confidence 35665 7999999999999999999998
No 27
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.87 E-value=1.1e-21 Score=180.33 Aligned_cols=142 Identities=15% Similarity=0.318 Sum_probs=114.7
Q ss_pred ccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCC----------------
Q 028365 63 SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA---------------- 126 (210)
Q Consensus 63 ~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~---------------- 126 (210)
...||.+..++ .+.|.|++++++++++++.||++++||||+ ++||+||++|++.++++.++.
T Consensus 24 ~se~G~~e~~~-~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~-~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~ 101 (493)
T 2d5f_A 24 ESEGGLIETWN-SQHPELQCAGVTVSKRTLNRNGLHLPSYSP-YPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGS 101 (493)
T ss_dssp ECSSEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECEEEEEECCTTCCCCEEECC--------
T ss_pred ecCCcEEEEeC-CCChhhccCCEEEEEEEeCCCcEeCceecC-CCeEEEEEeCEEEEEEEeCCCcccccccccccccccc
Confidence 34577665555 566999999999999999999999999996 689999999999999996521
Q ss_pred -Ce-------EEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEecCCCCC--------ceec----------------
Q 028365 127 -NT-------VYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPG--------LQIT---------------- 174 (210)
Q Consensus 127 -~~-------~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg--------~~~i---------------- 174 (210)
.+ .....|++||+++||+|++||++|.|+++++++++++..+.. .+.+
T Consensus 102 ~~~~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~ 181 (493)
T 2d5f_A 102 RSQQQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQ 181 (493)
T ss_dssp -----CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC---
T ss_pred ccccccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhhhhcc
Confidence 10 013499999999999999999999999999999998743321 1222
Q ss_pred -------------------hHhHHhhcCCHHHHHHhcCCCHHHHHHHhhhhC
Q 028365 175 -------------------DFALFANNLSSQLVEQTTFLDDATVKRLKAILG 207 (210)
Q Consensus 175 -------------------~~~~f~s~~p~~vla~~f~~~~~~v~~l~~~~~ 207 (210)
+.++|. ++++++|+++|+++.++++||++...
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~nif~-gf~~e~La~aF~v~~~~v~kl~~~~~ 232 (493)
T 2d5f_A 182 QQKSHGGRKQGQHQQQEEEGGSVLS-GFSKHFLAQSFNTNEDTAEKLRSPDD 232 (493)
T ss_dssp ------------------CCCCGGG-GSCHHHHHHHTTCCHHHHHHTTCTTC
T ss_pred cccccccccccccccccccccchhh-cCCHHHHHhHhCCCHHHHHHhhhccc
Confidence 235665 79999999999999999999997654
No 28
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.86 E-value=2.6e-21 Score=176.20 Aligned_cols=141 Identities=12% Similarity=0.167 Sum_probs=118.3
Q ss_pred ccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEE------------
Q 028365 63 SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVY------------ 130 (210)
Q Consensus 63 ~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~------------ 130 (210)
...+|.+..++..+ |+|+++|++++++++.|+|+++||||+ ++|++||++|++.++++.++-.+.|
T Consensus 22 ~se~G~~e~w~~~~-~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~ 99 (466)
T 3kgl_A 22 KAEAGRIEVWDHHA-PQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGS 99 (466)
T ss_dssp EETTEEEEECCTTS-HHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC--
T ss_pred eCCCcEEEEECCCC-hhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCCcchhhccccccccccc
Confidence 56789999988776 999999999999999999999999996 8999999999999999987211111
Q ss_pred ----------------------------------------------EEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEe
Q 028365 131 ----------------------------------------------VKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSF 164 (210)
Q Consensus 131 ----------------------------------------------~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f 164 (210)
...|++||+++||+|++||+.|.|++++++++.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~ 179 (466)
T 3kgl_A 100 PFGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVL 179 (466)
T ss_dssp ---------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEE
Confidence 1389999999999999999999999999999988
Q ss_pred cCCCCC--------ceech------------------HhHHhhcCCHHHHHHhcCCCHHHHHHHhhhh
Q 028365 165 NSPNPG--------LQITD------------------FALFANNLSSQLVEQTTFLDDATVKRLKAIL 206 (210)
Q Consensus 165 ~s~~pg--------~~~i~------------------~~~f~s~~p~~vla~~f~~~~~~v~~l~~~~ 206 (210)
+..+.. .+.++ .++|. ++++++|+++|+++.++++||...-
T Consensus 180 d~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~s-GF~~e~La~Af~v~~e~~~kL~~~q 246 (466)
T 3kgl_A 180 DLASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILN-GFTPEVLAKAFKIDVRTAQQLQNQQ 246 (466)
T ss_dssp ESSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGG-GSCHHHHHHHHTSCHHHHHHHTCTT
T ss_pred cCCCcccccCCceeeeEecCCCccccccccccccccCCCccc-cCCHHHHHHHhCCCHHHHHHHhccc
Confidence 654432 22222 25665 7999999999999999999998653
No 29
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.86 E-value=2.4e-21 Score=178.20 Aligned_cols=139 Identities=15% Similarity=0.197 Sum_probs=114.6
Q ss_pred ccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCC-e-------------
Q 028365 63 SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAN-T------------- 128 (210)
Q Consensus 63 ~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~-~------------- 128 (210)
...||.+..++. +.|+|+++|+++++++++||++.+||||+ +.||+||++|++.++++.+ +. +
T Consensus 27 ~se~G~~e~~~~-~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~~~~yV~~G~g~~g~v~p-g~~et~~~~~~~~~~~~ 103 (510)
T 3c3v_A 27 ESEGGYIETWNP-NNQEFECAGVALSRLVLRRNALRRPFYSN-APQEIFIQQGRGYFGLIFP-GCPSTYEEPAQQGRRYQ 103 (510)
T ss_dssp EETTEEEEECCT-TSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECCEEEEEECT-TCCCCEEEECCC-----
T ss_pred ccCCceEEEeCC-CCcccccCcEEEEEEEECCCCCccceecC-CCeEEEEEeCEEEEEEEeC-CCccccccccccccccc
Confidence 466776666655 55999999999999999999999999996 7999999999999999986 32 0
Q ss_pred -------------E--------EEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEecCCCCC--------ceech----
Q 028365 129 -------------V--------YVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPG--------LQITD---- 175 (210)
Q Consensus 129 -------------~--------~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg--------~~~i~---- 175 (210)
. +...|++||+++||+|++||++|.|+++++++++++..+.. .+.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~ 183 (510)
T 3c3v_A 104 SQRPPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAGNHE 183 (510)
T ss_dssp ---------------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSCCCC
T ss_pred cccccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecCCcc
Confidence 0 12589999999999999999999999999999999765521 11111
Q ss_pred --------------------------------------------------------HhHHhhcCCHHHHHHhcCCC-HHH
Q 028365 176 --------------------------------------------------------FALFANNLSSQLVEQTTFLD-DAT 198 (210)
Q Consensus 176 --------------------------------------------------------~~~f~s~~p~~vla~~f~~~-~~~ 198 (210)
.++| +++++++|+++|+++ +++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~-sgF~~~~La~af~v~~~~~ 262 (510)
T 3c3v_A 184 QEFLRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIF-SGFTPEFLAQAFQVDDRQI 262 (510)
T ss_dssp CTTGGGCC------------------------------------------------CCTG-GGSCHHHHHHHHTCCCHHH
T ss_pred cccchhhhccccccccccccccccccccccccccccccccccccccccccccccccccce-ecCCHHHHHHHhCCCHHHH
Confidence 1345 489999999999999 999
Q ss_pred HHHHhhh
Q 028365 199 VKRLKAI 205 (210)
Q Consensus 199 v~~l~~~ 205 (210)
+++|+..
T Consensus 263 ~~~l~~~ 269 (510)
T 3c3v_A 263 VQNLRGE 269 (510)
T ss_dssp HHHHTTT
T ss_pred HHHhhcc
Confidence 9999864
No 30
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.84 E-value=1.2e-19 Score=161.38 Aligned_cols=154 Identities=16% Similarity=0.134 Sum_probs=125.7
Q ss_pred CCCceEEecCCCCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecC
Q 028365 46 TADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS 125 (210)
Q Consensus 46 ~~~df~f~~l~~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~ 125 (210)
....|+|+ .....+. ...||.++.+....++..++ +.+.+++++||+..++|||+.+.|++||++|++++.+.++
T Consensus 222 ~~~~~v~~-~~~~~~~-~~~~g~~~~~~~~~~~~~~~--~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~- 296 (385)
T 1j58_A 222 VPYPFTYR-LLEQEPI-ESEGGKVYIADSTNFKVSKT--IASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFAS- 296 (385)
T ss_dssp CSSCSEEE-GGGSCCE-ECSSEEEEEESTTTSTTCCS--CEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEE-
T ss_pred CCCCeeee-cccCCCe-eCCCceEEEeecccCCcccc--eEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcC-
Confidence 45678888 4444343 45688888888888886544 7889999999999999999887999999999999998654
Q ss_pred CCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEecCCCCCceechHhHHhhcCCHHHHHHhcCCCHHHHHHHhhh
Q 028365 126 ANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKAI 205 (210)
Q Consensus 126 ~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg~~~i~~~~f~s~~p~~vla~~f~~~~~~v~~l~~~ 205 (210)
+++..+..|++||++++|+|..|++.|.+++++.+++++....+....+..++ ..+|+++++++|+++++++++|++.
T Consensus 297 ~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~~~l--~~~~~~v~~~~f~~~~~~~~~l~~~ 374 (385)
T 1j58_A 297 DGHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQWL--AMLPETFVQAHLDLGKDFTDVLSKE 374 (385)
T ss_dssp TTEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHHHHH--HTSCHHHHHHHHTCCHHHHTTCCSS
T ss_pred CCcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCHHHHH--HhCCHHHHHHHhCCCHHHHHhhhcc
Confidence 33222449999999999999999999999999999999887766666554433 3599999999999999999999976
Q ss_pred h
Q 028365 206 L 206 (210)
Q Consensus 206 ~ 206 (210)
.
T Consensus 375 ~ 375 (385)
T 1j58_A 375 K 375 (385)
T ss_dssp C
T ss_pred C
Confidence 4
No 31
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.83 E-value=3.6e-20 Score=170.19 Aligned_cols=140 Identities=15% Similarity=0.264 Sum_probs=115.4
Q ss_pred ccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCe--------------
Q 028365 63 SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANT-------------- 128 (210)
Q Consensus 63 ~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~-------------- 128 (210)
...||.+..++ .++|+|+++|++++++++.|+|+++||+|+ ++|++||++|++.++++.|.-.+
T Consensus 27 ~se~G~~e~w~-~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~ 104 (531)
T 3fz3_A 27 QAEAGQIETWN-FNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQ 104 (531)
T ss_dssp EETTEEEEECC-TTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEECCCC-------
T ss_pred ccCCceEEEeC-CCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEEEcCCCcccccccccccccccc
Confidence 56788777776 569999999999999999999999999996 89999999999999999772011
Q ss_pred ------------------------------------------------------------------EEEEEEcCCCEEEE
Q 028365 129 ------------------------------------------------------------------VYVKTLKKGDIMIF 142 (210)
Q Consensus 129 ------------------------------------------------------------------~~~~~l~~GDv~~~ 142 (210)
.....+++||++.|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviai 184 (531)
T 3fz3_A 105 QEQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAI 184 (531)
T ss_dssp ------------------------------------------------------------CCSCEESCCEEEETTEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEE
Confidence 01247999999999
Q ss_pred CCCCeeEEEeCCCCCEEEEEEecCCCC-----C---cee-----------------------------------------
Q 028365 143 PQGLLHFQVNSGADGALGFVSFNSPNP-----G---LQI----------------------------------------- 173 (210)
Q Consensus 143 P~g~~H~~~N~g~~~a~~~~~f~s~~p-----g---~~~----------------------------------------- 173 (210)
|+|+.||++|.|+++++++++++..+. + .+.
T Consensus 185 PaG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (531)
T 3fz3_A 185 PAGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQEQ 264 (531)
T ss_dssp CTTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC------------------------------
T ss_pred CCCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccccccccchhhh
Confidence 999999999999999999998864332 1 111
Q ss_pred --chHhHHhhcCCHHHHHHhcCCCHHHHHHHhhh
Q 028365 174 --TDFALFANNLSSQLVEQTTFLDDATVKRLKAI 205 (210)
Q Consensus 174 --i~~~~f~s~~p~~vla~~f~~~~~~v~~l~~~ 205 (210)
-..++|. +|+.++|++||+++.++++||...
T Consensus 265 ~~~~~nifs-GFs~e~La~A~~v~~~~a~kLq~~ 297 (531)
T 3fz3_A 265 QGNGNNVFS-GFNTQLLAQALNVNEETARNLQGQ 297 (531)
T ss_dssp --CCSSGGG-GSCHHHHHHHHTSCHHHHHHHHTS
T ss_pred cccCCCeee-cCCHHHHHHHHCCCHHHHHHHhcc
Confidence 1125676 799999999999999999999854
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.83 E-value=5.7e-20 Score=163.38 Aligned_cols=147 Identities=16% Similarity=0.249 Sum_probs=121.6
Q ss_pred eEEecCCCCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeE
Q 028365 50 FVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTV 129 (210)
Q Consensus 50 f~f~~l~~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~ 129 (210)
++|+ +....+. ...||+++.++...+|.++ ++++.++.+.||+..++|||+ +.|++||++|++++++++. +++.
T Consensus 48 ~~~~-~~~~~~~-~~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~-~g~~ 121 (385)
T 1j58_A 48 MKFS-FSDTHNR-LEKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDE-KGRS 121 (385)
T ss_dssp CEEC-GGGSCCE-EETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECT-TSCE
T ss_pred eEEE-cccCCcc-ccCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeC-CCcE
Confidence 7777 6565544 4589999999999999988 478999999999999999998 7999999999999999876 5664
Q ss_pred EEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEecCCCCCcee-c-hHhHHhhcCCHHHHHHhcCCCHHHHHHHhh
Q 028365 130 YVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQI-T-DFALFANNLSSQLVEQTTFLDDATVKRLKA 204 (210)
Q Consensus 130 ~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg~~~-i-~~~~f~s~~p~~vla~~f~~~~~~v~~l~~ 204 (210)
+...|++||+++||+|..|++.|.+ +++.++.+|+...+.... . ..++|. .+|.++|+++|+++.++++++++
T Consensus 122 ~~~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~p~evla~~~~vs~~~~~~l~~ 196 (385)
T 1j58_A 122 FIDDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLTDWLA-HTPKEVIAANFGVTKEEISNLPG 196 (385)
T ss_dssp EEEEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHHHHHH-TSCHHHHHHHHTCCTGGGTTSCS
T ss_pred EEEEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhhhhhh-cccHHHHHHHhCCCHHHHHhccc
Confidence 4459999999999999999999987 468888888877665432 1 233444 69999999999999998888764
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.78 E-value=2.9e-19 Score=126.09 Aligned_cols=72 Identities=15% Similarity=0.121 Sum_probs=63.6
Q ss_pred EecCCCCCCccccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEec
Q 028365 52 FSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS 124 (210)
Q Consensus 52 f~~l~~~~~~~~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~ 124 (210)
|+.+++.+.+ +...|+++.+++.+||+|++++++++++++.||++.+||||++|+|++||++|+++++++++
T Consensus 4 fnl~~~~p~~-~n~~G~~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~ 75 (79)
T 1dgw_X 4 FNLRSRDPIY-SNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGL 75 (79)
T ss_dssp EETTSSCCSE-ECSSEEEEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEE
T ss_pred cccccCCCCc-cCCCCcEEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecC
Confidence 6734444455 45556679999999999999999999999999999999999999999999999999999987
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.56 E-value=2.4e-14 Score=107.33 Aligned_cols=84 Identities=25% Similarity=0.293 Sum_probs=72.6
Q ss_pred ceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEE
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVS 163 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~ 163 (210)
++.+.++.++||+..++|||+...|++||++|++++.+ + +++.+ .+++||++++|+|..|.+.|.+++++.++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~-~--~~~~~--~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v 112 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQ-G--NGIVT--HLKAGDIAIAKPGQVHGAMNSGPEPFIFVSV 112 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEEC-S--TTCEE--EEETTEEEEECTTCCCEEEECSSSCEEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEE-C--CCeEE--EeCCCCEEEECCCCEEEeEeCCCCCEEEEEE
Confidence 46888899999999999999867999999999999876 1 46655 9999999999999999999999999999998
Q ss_pred ecCCCCCce
Q 028365 164 FNSPNPGLQ 172 (210)
Q Consensus 164 f~s~~pg~~ 172 (210)
+....+++.
T Consensus 113 ~~p~~~~~~ 121 (125)
T 3h8u_A 113 VAPGNAGFA 121 (125)
T ss_dssp EESTTCCCC
T ss_pred ECCCcccch
Confidence 886666554
No 35
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.55 E-value=5e-14 Score=110.57 Aligned_cols=79 Identities=22% Similarity=0.293 Sum_probs=71.3
Q ss_pred ceEEEEEEEeCCc-cccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCC-CeeEEEeCCCCCEEEE
Q 028365 84 GLSLARLDLAKGG-VIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQG-LLHFQVNSGADGALGF 161 (210)
Q Consensus 84 gis~~~v~l~pgg-~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g-~~H~~~N~g~~~a~~~ 161 (210)
++.+.++.++||+ ..++|||+...|++||++|++++.+ +++.+ .|++||++++|+| ..|.+.|.+++++.++
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~----~~~~~--~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l 118 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTM----ENDQY--PIAPGDFVGFPCHAAAHSISNDGTETLVCL 118 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEE----TTEEE--EECTTCEEEECTTSCCEEEECCSSSCEEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEE----CCEEE--EeCCCCEEEECCCCceEEeEeCCCCCEEEE
Confidence 4788999999999 5999999777999999999999998 78866 9999999999998 9999999999999998
Q ss_pred EEecCCC
Q 028365 162 VSFNSPN 168 (210)
Q Consensus 162 ~~f~s~~ 168 (210)
++.....
T Consensus 119 ~v~~p~~ 125 (162)
T 3l2h_A 119 VIGQRLD 125 (162)
T ss_dssp EEEECCS
T ss_pred EEECCCC
Confidence 8776544
No 36
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.54 E-value=8.6e-14 Score=99.74 Aligned_cols=79 Identities=19% Similarity=0.198 Sum_probs=70.5
Q ss_pred CcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 82 GLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 82 ~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
+.++.+.++.++||...++|+|+...|++||++|++++.+ +++.+ .+++||++++|+|..|...|.+++++.++
T Consensus 25 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~----~~~~~--~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~ 98 (105)
T 1v70_A 25 SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRV----GEEEA--LLAPGMAAFAPAGAPHGVRNESASPALLL 98 (105)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEE----TTEEE--EECTTCEEEECTTSCEEEECCSSSCEEEE
T ss_pred CCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEE----CCEEE--EeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 3457888999999999999999876799999999999998 78866 99999999999999999999999999988
Q ss_pred EEecC
Q 028365 162 VSFNS 166 (210)
Q Consensus 162 ~~f~s 166 (210)
.++..
T Consensus 99 ~v~~p 103 (105)
T 1v70_A 99 VVTAP 103 (105)
T ss_dssp EEEES
T ss_pred EEeCC
Confidence 77653
No 37
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.53 E-value=7.3e-13 Score=105.27 Aligned_cols=95 Identities=14% Similarity=0.138 Sum_probs=78.6
Q ss_pred CCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECC
Q 028365 65 INAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQ 144 (210)
Q Consensus 65 ~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~ 144 (210)
.|...+.+....- +....++.+.++.++||+..++|||+ ..|++||++|++++.+ +++.+ .|++||+++||+
T Consensus 37 ~g~~~~~L~~~~~-g~~~~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~~i----~~~~~--~l~~Gd~i~ip~ 108 (167)
T 3ibm_A 37 SGARRQTLVGRPA-GQEAPAFETRYFEVEPGGYTTLERHE-HTHVVMVVRGHAEVVL----DDRVE--PLTPLDCVYIAP 108 (167)
T ss_dssp CCEEEEEEECTTT-TCCSSSEEEEEEEECTTCBCCCBBCS-SCEEEEEEESEEEEEE----TTEEE--EECTTCEEEECT
T ss_pred CCcEEEEEECCCC-CCCCCcEEEEEEEECCCCCCCCccCC-CcEEEEEEeCEEEEEE----CCEEE--EECCCCEEEECC
Confidence 4555555544332 22234578889999999999999997 5999999999999998 88866 999999999999
Q ss_pred CCeeEEEeCC-CCCEEEEEEecCC
Q 028365 145 GLLHFQVNSG-ADGALGFVSFNSP 167 (210)
Q Consensus 145 g~~H~~~N~g-~~~a~~~~~f~s~ 167 (210)
|..|.+.|.+ ++++.+++++...
T Consensus 109 ~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 109 HAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp TCCEEEEEESSSCCEEEEEEEESS
T ss_pred CCcEEEEeCCCCCCEEEEEEEeCC
Confidence 9999999999 9999999887644
No 38
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.52 E-value=6.6e-14 Score=101.04 Aligned_cols=75 Identities=15% Similarity=0.174 Sum_probs=66.9
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCC--eEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAN--TVYVKTLKKGDIMIFPQGLLHFQVNSGADGALG 160 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~--~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~ 160 (210)
..+.+.+++++||+..++|.|+...|++||++|++++.+ ++ +.+ .|++||++++|+|..|...|.|++++.+
T Consensus 16 ~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~----~~g~~~~--~l~~Gd~~~~p~~~~H~~~N~g~~~~~~ 89 (97)
T 2fqp_A 16 ERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLET----PEGSVTS--QLTRGVSYTRPEGVEHNVINPSDTEFVF 89 (97)
T ss_dssp SSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEE----TTEEEEE--EECTTCCEEECTTCEEEEECCSSSCEEE
T ss_pred CeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEe----CCCCEEE--EEcCCCEEEeCCCCcccCEeCCCCcEEE
Confidence 357889999999999999999875579999999999998 65 555 9999999999999999999999999988
Q ss_pred EEE
Q 028365 161 FVS 163 (210)
Q Consensus 161 ~~~ 163 (210)
+.+
T Consensus 90 l~v 92 (97)
T 2fqp_A 90 VEI 92 (97)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 39
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.52 E-value=1e-13 Score=108.94 Aligned_cols=77 Identities=19% Similarity=0.225 Sum_probs=68.6
Q ss_pred ceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCC---------eEEEEEEcCCCEEEECCCCeeEEEeCC
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAN---------TVYVKTLKKGDIMIFPQGLLHFQVNSG 154 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~---------~~~~~~l~~GDv~~~P~g~~H~~~N~g 154 (210)
++.+.++.++||+..++|+|+ ..|++||++|++++.+ ++ +.+ .+++||++++|+|..|...|.+
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~----~~~~~~~~~~~~~~--~l~~Gd~i~ip~~~~H~~~n~~ 112 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHS-CEEVFTVLKGKGTLLM----GSSSLKYPGQPQEI--PFFQNTTFSIPVNDPHQVWNSD 112 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEES-SCEEEEEEECCEEEEE----CCSSSSSCCSCEEE--EECTTEEEEECTTCCEEEECCC
T ss_pred cEEEEEEEECCCCcCCCeECC-CCeEEEEEeCEEEEEE----CCccccccCccEEE--EeCCCCEEEECCCCcEEeEeCC
Confidence 478888999999999999996 5899999999999998 45 655 9999999999999999999999
Q ss_pred -CCCEEEEEEecCC
Q 028365 155 -ADGALGFVSFNSP 167 (210)
Q Consensus 155 -~~~a~~~~~f~s~ 167 (210)
++++.+++++...
T Consensus 113 ~~~~~~~l~i~~~~ 126 (163)
T 1lr5_A 113 EHEDLQVLVIISRP 126 (163)
T ss_dssp SSSCEEEEEEEESS
T ss_pred CCCCEEEEEEECCC
Confidence 8899998877643
No 40
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.49 E-value=2.8e-13 Score=107.15 Aligned_cols=81 Identities=21% Similarity=0.173 Sum_probs=72.1
Q ss_pred cceEEEEEEEeCCccc-cceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCC--CeeEEEeCCCCCEE
Q 028365 83 LGLSLARLDLAKGGVI-PIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQG--LLHFQVNSGADGAL 159 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~-~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g--~~H~~~N~g~~~a~ 159 (210)
..+.+.+++++||+.. ++|||+...|++||++|++++.+ +++.+ .|++||++++|+| ..|.+.|.++++++
T Consensus 41 ~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~----~~~~~--~l~~GD~i~ip~~~~~~H~~~n~~~~~~~ 114 (163)
T 3i7d_A 41 SQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVD----DQGEH--PMVPGDCAAFPAGDPNGHQFVNRTDAPAT 114 (163)
T ss_dssp CSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEE----TTEEE--EECTTCEEEECTTCCCCBEEECCSSSCEE
T ss_pred CeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEE----CCEEE--EeCCCCEEEECCCCCcceEEEECCCCCEE
Confidence 3578899999999965 89999876799999999999998 78866 9999999999999 99999999999999
Q ss_pred EEEEecCCCC
Q 028365 160 GFVSFNSPNP 169 (210)
Q Consensus 160 ~~~~f~s~~p 169 (210)
+++++.....
T Consensus 115 ~l~v~~p~~~ 124 (163)
T 3i7d_A 115 FLVVGTRTPT 124 (163)
T ss_dssp EEEEEECCSC
T ss_pred EEEEECCCCC
Confidence 9988875543
No 41
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.48 E-value=3.6e-13 Score=98.17 Aligned_cols=78 Identities=21% Similarity=0.209 Sum_probs=70.2
Q ss_pred cceEEEEEEEeCCccccce--ecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEE
Q 028365 83 LGLSLARLDLAKGGVIPIH--THPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALG 160 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH--~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~ 160 (210)
.++.+.++.+.||...++| +|++..|++||++|++++.+ +++.+ .+++||++++|+|..|...|.+++++.+
T Consensus 19 ~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~----~~~~~--~l~~Gd~~~i~~~~~H~~~~~~~~~~~~ 92 (113)
T 2gu9_A 19 RQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIV----DGHTQ--ALQAGSLIAIERGQAHEIRNTGDTPLKT 92 (113)
T ss_dssp TTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEE----TTEEE--EECTTEEEEECTTCCEEEECCSSSCEEE
T ss_pred CcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEE----CCEEE--EeCCCCEEEECCCCcEEeEcCCCCCEEE
Confidence 4578899999999999988 99857999999999999998 78866 9999999999999999999999999988
Q ss_pred EEEecC
Q 028365 161 FVSFNS 166 (210)
Q Consensus 161 ~~~f~s 166 (210)
+.++..
T Consensus 93 ~~v~~~ 98 (113)
T 2gu9_A 93 VNFYHP 98 (113)
T ss_dssp EEEEES
T ss_pred EEEECC
Confidence 887654
No 42
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.48 E-value=2.4e-13 Score=103.79 Aligned_cols=83 Identities=17% Similarity=0.223 Sum_probs=72.9
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEE--EEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAG--FISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALG 160 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~--vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~ 160 (210)
..+.+.++.++||+..++|||+. .|++||++|++++. + +++.+ .+++||++++|+|..|...|.+++++.+
T Consensus 37 ~~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~~~----~~~~~--~l~~Gd~~~ip~~~~H~~~~~~~~~~~~ 109 (145)
T 3ht1_A 37 DRFVLTEFEVSPNGSTPPHFHEW-EHEIYVLEGSMGLVLPD----QGRTE--EVGPGEAIFIPRGEPHGFVTGPGQTCRF 109 (145)
T ss_dssp CSEEEEEEEEEEEEECCCEECSS-CEEEEEEEECEEEEEGG----GTEEE--EECTTCEEEECTTCCBEEECCTTCCEEE
T ss_pred CcEEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEEeE----CCEEE--EECCCCEEEECCCCeEEeEcCCCCCEEE
Confidence 35788899999999999999975 88899999999998 7 77866 9999999999999999999999999999
Q ss_pred EEEecCCCCCce
Q 028365 161 FVSFNSPNPGLQ 172 (210)
Q Consensus 161 ~~~f~s~~pg~~ 172 (210)
+.++....+...
T Consensus 110 l~i~~~~~~~~~ 121 (145)
T 3ht1_A 110 LVVAPCERPPVR 121 (145)
T ss_dssp EEEEESCCCCCE
T ss_pred EEEECCCCCCee
Confidence 988876555443
No 43
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.48 E-value=2.8e-13 Score=105.06 Aligned_cols=81 Identities=17% Similarity=0.265 Sum_probs=69.7
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeE----EEEEEcCCCEEEECCCCeeEEEeCCCCCE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTV----YVKTLKKGDIMIFPQGLLHFQVNSGADGA 158 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~----~~~~l~~GDv~~~P~g~~H~~~N~g~~~a 158 (210)
..+.+.++.++||+..++|||+...|++||++|++++.+ +++. ++..|++||++++|+|..|.+.|.+++++
T Consensus 41 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i----~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~ 116 (148)
T 2oa2_A 41 DHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQM----GHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPL 116 (148)
T ss_dssp SSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEE----ESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCE
T ss_pred CceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEE----CCccccceeeEEECCCCEEEECCCCcEEEEECCCCCE
Confidence 346888899999999999999876799999999999998 4443 12499999999999999999999999999
Q ss_pred EEEEEecCC
Q 028365 159 LGFVSFNSP 167 (210)
Q Consensus 159 ~~~~~f~s~ 167 (210)
.+++++...
T Consensus 117 ~~l~i~~~~ 125 (148)
T 2oa2_A 117 KLYSIYAPP 125 (148)
T ss_dssp EEEEEEESC
T ss_pred EEEEEECCC
Confidence 888877643
No 44
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.47 E-value=2.9e-13 Score=100.75 Aligned_cols=74 Identities=19% Similarity=0.251 Sum_probs=64.4
Q ss_pred CcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 82 GLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 82 ~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
+.++.+.++.++||...++|||+. .|++||++|++++.+ +++.+ .|++||++++|+|..|.+.|.++....++
T Consensus 33 ~~~~~v~~~~l~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i----~~~~~--~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~ 105 (114)
T 3fjs_A 33 EHRLEVMRMVLPAGKQVGSHSVAG-PSTIQCLEGEVEIGV----DGAQR--RLHQGDLLYLGAGAAHDVNAITNTSLLVT 105 (114)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSS-CEEEEEEESCEEEEE----TTEEE--EECTTEEEEECTTCCEEEEESSSEEEEEE
T ss_pred CCCEEEEEEEECCCCccCceeCCC-cEEEEEEECEEEEEE----CCEEE--EECCCCEEEECCCCcEEEEeCCCcEEEEE
Confidence 345789999999999999999986 799999999999998 78866 99999999999999999999865544444
Q ss_pred E
Q 028365 162 V 162 (210)
Q Consensus 162 ~ 162 (210)
.
T Consensus 106 ~ 106 (114)
T 3fjs_A 106 V 106 (114)
T ss_dssp E
T ss_pred E
Confidence 3
No 45
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.47 E-value=1.7e-13 Score=115.26 Aligned_cols=84 Identities=19% Similarity=0.204 Sum_probs=69.7
Q ss_pred cCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEE-------ecC-------CCeEEEEEEcCCCEEEECCCC
Q 028365 81 NGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFI-------SSS-------ANTVYVKTLKKGDIMIFPQGL 146 (210)
Q Consensus 81 ~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv-------~~~-------~~~~~~~~l~~GDv~~~P~g~ 146 (210)
.+.++++.++.++||+..++|||++..|++||++|++++.+- +.. .++.+...+++||++++|+|.
T Consensus 39 ~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~ 118 (239)
T 2xlg_A 39 KDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHY 118 (239)
T ss_dssp TTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTE
T ss_pred CCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCC
Confidence 345688999999999999999999889999999999999761 110 123335599999999999999
Q ss_pred eeEEEeCCCCCEEE-EEEe
Q 028365 147 LHFQVNSGADGALG-FVSF 164 (210)
Q Consensus 147 ~H~~~N~g~~~a~~-~~~f 164 (210)
+|.+.|.+++++.+ +..+
T Consensus 119 ~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 119 MHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp EEEEECCSSSCEEEEEEEE
T ss_pred CEEEEeCCCCCEEEEEEEE
Confidence 99999999999888 6666
No 46
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.46 E-value=3.5e-13 Score=100.87 Aligned_cols=77 Identities=21% Similarity=0.354 Sum_probs=69.2
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
.++.+.++.++||+..++|+|+. .|++||++|++++.+ +++.+ .+++||++++|+|..|...|.++ ++.++.
T Consensus 39 ~~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~----~~~~~--~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~ 110 (126)
T 4e2g_A 39 KNLMLNWVRIEPNTEMPAHEHPH-EQAGVMLEGTLELTI----GEETR--VLRPGMAYTIPGGVRHRARTFED-GCLVLD 110 (126)
T ss_dssp SSCEEEEEEECTTCEEEEECCSS-EEEEEEEEECEEEEE----TTEEE--EECTTEEEEECTTCCEEEECCTT-CEEEEE
T ss_pred CCeEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEE----CCEEE--EeCCCCEEEECCCCcEEeEECCC-CEEEEE
Confidence 35789999999999999999986 999999999999998 78866 99999999999999999999887 788888
Q ss_pred EecCC
Q 028365 163 SFNSP 167 (210)
Q Consensus 163 ~f~s~ 167 (210)
++...
T Consensus 111 v~~p~ 115 (126)
T 4e2g_A 111 IFSPP 115 (126)
T ss_dssp EEESC
T ss_pred EECCC
Confidence 87753
No 47
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.46 E-value=8.1e-13 Score=100.73 Aligned_cols=77 Identities=21% Similarity=0.223 Sum_probs=68.9
Q ss_pred CcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 82 GLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 82 ~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
+..+.+.+++++||+..++|+|+...|++||++|++++.+ +++.+ .|++||++++|+|..|.+.|.+++++.++
T Consensus 54 ~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i----~~~~~--~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l 127 (133)
T 1o4t_A 54 NKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHD----NGKDV--PIKAGDVCFTDSGESHSIENTGNTDLEFL 127 (133)
T ss_dssp TSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEE----TTEEE--EEETTEEEEECTTCEEEEECCSSSCEEEE
T ss_pred CceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEE----CCEEE--EeCCCcEEEECCCCcEEeEECCCCCEEEE
Confidence 4456788999999999999999756899999999999998 78866 99999999999999999999999999888
Q ss_pred EEe
Q 028365 162 VSF 164 (210)
Q Consensus 162 ~~f 164 (210)
++.
T Consensus 128 ~v~ 130 (133)
T 1o4t_A 128 AVI 130 (133)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 48
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.45 E-value=9.8e-13 Score=103.61 Aligned_cols=78 Identities=15% Similarity=0.228 Sum_probs=71.3
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
..+.+..+.++||+..++|||+. .|++||++|++++.+ +++.+ .+++||++++|+|..|...|.+++++.+++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~v~v----~g~~~--~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~ 114 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHAH-VHAVMIHRGHGQCLV----GETIS--DVAQGDLVFIPPMTWHQFRANRGDCLGFLC 114 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEEEEEEEE----TTEEE--EEETTCEEEECTTCCEEEECCSSSCEEEEE
T ss_pred CcEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEE----CCEEE--EeCCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 45788889999999999999975 899999999999998 88866 999999999999999999999999999998
Q ss_pred EecCC
Q 028365 163 SFNSP 167 (210)
Q Consensus 163 ~f~s~ 167 (210)
++...
T Consensus 115 i~~~~ 119 (156)
T 3kgz_A 115 VVNAA 119 (156)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 88754
No 49
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.45 E-value=8.5e-13 Score=105.04 Aligned_cols=78 Identities=15% Similarity=0.156 Sum_probs=71.0
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
.++.+..++++||+..++|||+. .|++||++|++++.+ +++.+ .+++||++++|+|..|.+.|.+++++.+++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~~~v----~g~~~--~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~ 123 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQH-AHGVMILKGRGHAMV----GRAVS--AVAPYDLVTIPGWSWHQFRAPADEALGFLC 123 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEECEEEEE----TTEEE--EECTTCEEEECTTCCEEEECCTTSCEEEEE
T ss_pred CeEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEE----CCEEE--EeCCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 45788889999999999999975 899999999999998 88866 999999999999999999999999999998
Q ss_pred EecCC
Q 028365 163 SFNSP 167 (210)
Q Consensus 163 ~f~s~ 167 (210)
++...
T Consensus 124 i~~~~ 128 (166)
T 3jzv_A 124 MVNAE 128 (166)
T ss_dssp EEESS
T ss_pred EEccC
Confidence 87643
No 50
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.44 E-value=4.2e-12 Score=93.48 Aligned_cols=75 Identities=23% Similarity=0.315 Sum_probs=66.5
Q ss_pred ceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEE
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVS 163 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~ 163 (210)
++.+.+++++||...++|+|+ ..|++||++|++++.+ +++.+ .+++||++++|+|..|...|.+ ++.++.+
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~----~~~~~--~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~v 103 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNV----DGVIK--VLTAGDSFFVPPHVDHGAVCPT--GGILIDT 103 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEE----TTEEE--EECTTCEEEECTTCCEEEEESS--CEEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEE----CCEEE--EeCCCCEEEECcCCceeeEeCC--CcEEEEE
Confidence 378889999999999999997 5999999999999998 78866 9999999999999999999976 6777777
Q ss_pred ecCC
Q 028365 164 FNSP 167 (210)
Q Consensus 164 f~s~ 167 (210)
+...
T Consensus 104 ~~p~ 107 (116)
T 2pfw_A 104 FSPA 107 (116)
T ss_dssp EESC
T ss_pred ECCc
Confidence 7654
No 51
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.42 E-value=2e-12 Score=104.13 Aligned_cols=79 Identities=18% Similarity=0.163 Sum_probs=69.3
Q ss_pred cccCcceEEEEEEEeCCcccc---ceecCCCCEEEEEEeCEEEEEEEecCCC----eEEEEEEcCCCEEEECCCCeeEEE
Q 028365 79 AVNGLGLSLARLDLAKGGVIP---IHTHPAASEILLVVHGCITAGFISSSAN----TVYVKTLKKGDIMIFPQGLLHFQV 151 (210)
Q Consensus 79 ~l~~~gis~~~v~l~pgg~~~---pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~----~~~~~~l~~GDv~~~P~g~~H~~~ 151 (210)
...+..+.+.+++++||+..+ +|+|+. .|++||++|++++.+ ++ +.+ .|++||+++||++.+|.+.
T Consensus 111 ~~~~~~~~~~~~~~~pg~~~~~~~~h~h~~-~E~~~Vl~G~~~~~~----~~~~~~~~~--~l~~GD~~~~~~~~~H~~~ 183 (198)
T 2bnm_A 111 TKRAPSLVPLVVDVLTDNPDDAKFNSGHAG-NEFLFVLEGEIHMKW----GDKENPKEA--LLPTGASMFVEEHVPHAFT 183 (198)
T ss_dssp CTTSTTCEEEEEEECCCCGGGCCCCCCCSS-CEEEEEEESCEEEEE----SCTTSCEEE--EECTTCEEEECTTCCEEEE
T ss_pred CCCCCcceEEEEEEcCCCCCcccccccCCC-eEEEEEEeeeEEEEE----CCcCCcccE--EECCCCEEEeCCCCceEEE
Confidence 344556889999999999876 799976 899999999999998 66 766 9999999999999999999
Q ss_pred eC-CCCCEEEEEEe
Q 028365 152 NS-GADGALGFVSF 164 (210)
Q Consensus 152 N~-g~~~a~~~~~f 164 (210)
|. +++++.+++++
T Consensus 184 n~~~~~~~~~l~v~ 197 (198)
T 2bnm_A 184 AAKGTGSAKLIAVN 197 (198)
T ss_dssp ESTTSCCEEEEEEE
T ss_pred ecCCCCCeEEEEEe
Confidence 99 99999988765
No 52
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.41 E-value=2.3e-13 Score=99.14 Aligned_cols=80 Identities=18% Similarity=0.138 Sum_probs=67.5
Q ss_pred cCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEE
Q 028365 81 NGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALG 160 (210)
Q Consensus 81 ~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~ 160 (210)
.+-.+.+.+++++||+..++|+|+...|+.||++|++++.. . +++.....+++||++++|.|..|.+.|.|++++.+
T Consensus 13 en~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~--~-d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~ 89 (98)
T 3lag_A 13 DNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--P-DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVF 89 (98)
T ss_dssp ESSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--T-TSCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEE
T ss_pred cCCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEe--C-CCceEEEEecCCcEEEEcCCCcEECEECCCCeEEE
Confidence 33457899999999999999999987889999999998876 2 23333447999999999999999999999999999
Q ss_pred EEE
Q 028365 161 FVS 163 (210)
Q Consensus 161 ~~~ 163 (210)
+.+
T Consensus 90 IeV 92 (98)
T 3lag_A 90 LEI 92 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 53
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.41 E-value=7.9e-13 Score=105.96 Aligned_cols=79 Identities=18% Similarity=0.228 Sum_probs=71.4
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCC-CeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~-~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
.|..+.+++++||+..++|.|+ ..|++||++|++++.+ + ++.+ .|++||++ ||+|..|.+.|.++++++++
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~-~eE~~~VLeGel~l~l----d~ge~~--~L~~GDsi-~~~g~~H~~~N~g~~~ar~l 148 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTN-SIDYGIVLEGEIELEL----DDGAKR--TVRQGGII-VQRGTNHLWRNTTDKPCRIA 148 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCS-EEEEEEEEESCEEEEC----GGGCEE--EECTTCEE-EECSCCBEEECCSSSCEEEE
T ss_pred CCeEEEEEEECCCCCCCCeecC-ceEEEEEEeCEEEEEE----CCCeEE--EECCCCEE-EeCCCcEEEEeCCCCCEEEE
Confidence 4788999999999999999996 4899999999999998 5 6755 99999999 99999999999999999999
Q ss_pred EEecCCCC
Q 028365 162 VSFNSPNP 169 (210)
Q Consensus 162 ~~f~s~~p 169 (210)
+++....|
T Consensus 149 ~V~~P~~p 156 (172)
T 3es1_A 149 FILIEAPA 156 (172)
T ss_dssp EEEEECCC
T ss_pred EEEcCCCc
Confidence 99886655
No 54
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.40 E-value=3.9e-12 Score=103.07 Aligned_cols=100 Identities=16% Similarity=0.179 Sum_probs=77.7
Q ss_pred CceEEEeeccccCcccCcceEEEEEEEeCCcc------ccceecC--CCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCC
Q 028365 66 NAAVTPAFVAQFPAVNGLGLSLARLDLAKGGV------IPIHTHP--AASEILLVVHGCITAGFISSSANTVYVKTLKKG 137 (210)
Q Consensus 66 gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~------~~pH~Hp--~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~G 137 (210)
+..+..+..-.-|.. ...+.+..+.++||+. .++|+|+ +..|++||++|++.+.+.+. .++.+...+++|
T Consensus 49 ~~~~~~v~~l~~~~~-~~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~-~g~~~~~~l~~G 126 (190)
T 1x82_A 49 DPVVYEVYAVEQEEK-EGDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTP-EGDAKWISMEPG 126 (190)
T ss_dssp CCEEEEEEEECCCSC-TTCEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECT-TCCEEEEEECTT
T ss_pred CceEEEEEEecCCCC-CCCeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCc-CCcEEEEEECCC
Confidence 444555532222332 2357888889999998 7899998 34799999999999998543 345555699999
Q ss_pred CEEEECCCCeeEEEeCCCCCEEEEEEecCC
Q 028365 138 DIMIFPQGLLHFQVNSGADGALGFVSFNSP 167 (210)
Q Consensus 138 Dv~~~P~g~~H~~~N~g~~~a~~~~~f~s~ 167 (210)
|++++|+|..|...|.+++++.+++++...
T Consensus 127 D~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 127 TVVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp CEEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred cEEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 999999999999999999999998887653
No 55
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.40 E-value=2.9e-12 Score=94.82 Aligned_cols=75 Identities=20% Similarity=0.286 Sum_probs=65.7
Q ss_pred ceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEE-EEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVK-TLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~-~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
++.+.++.+.||+..++|||+ ..|++||++|++++.+ +++ .. .+++||++++|+|..|...|.+++++.++.
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i----~~~--~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~ 98 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSN-SYVHLIIIKGEMTLTL----EDQ--EPHNYKEGNIVYVPFNVKMLIQNINSDILEFFV 98 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECS-SCEEEEEEESEEEEEE----TTS--CCEEEETTCEEEECTTCEEEEECCSSSEEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCC-CcEEEEEEeCEEEEEE----CCE--EEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEE
Confidence 467788899999999999996 5999999999999998 565 34 899999999999999999999998888877
Q ss_pred Eec
Q 028365 163 SFN 165 (210)
Q Consensus 163 ~f~ 165 (210)
+..
T Consensus 99 i~~ 101 (117)
T 2b8m_A 99 VKA 101 (117)
T ss_dssp EEC
T ss_pred EEC
Confidence 643
No 56
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.40 E-value=1.8e-12 Score=97.77 Aligned_cols=77 Identities=17% Similarity=0.190 Sum_probs=69.2
Q ss_pred CcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 82 GLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 82 ~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
+.++.+.+++++||+..++|+|+ ..|++||++|++++.+ +++.+ .+++||++++|+|..|...|.+++++.++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i----~~~~~--~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l 117 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHP-WEHEIFVLKGKLTVLK----EQGEE--TVEEGFYIFVEPNEIHGFRNDTDSEVEFL 117 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCS-SCEEEEEEESEEEEEC----SSCEE--EEETTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CCCEEEEEEEECCCCcCCceeCC-CcEEEEEEEeEEEEEE----CCEEE--EECCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 44688999999999999999997 5999999999999998 77766 99999999999999999999999999888
Q ss_pred EEec
Q 028365 162 VSFN 165 (210)
Q Consensus 162 ~~f~ 165 (210)
+++.
T Consensus 118 ~v~~ 121 (126)
T 1vj2_A 118 CLIP 121 (126)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7664
No 57
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.40 E-value=3.3e-12 Score=95.74 Aligned_cols=76 Identities=17% Similarity=0.234 Sum_probs=68.3
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
..+.+..+.++||...++|||. ..|++||++|++++.+ +++.+ .+++||++++|+|..|...|.+++++.+++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H~-~~Ei~~v~~G~~~~~i----~~~~~--~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~ 104 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSHN-EYELFIVIQGNAIIRI----NDEDF--PVTKGDLIIIPLDSEHHVINNNQEDFHFYT 104 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCCS-SEEEEEEEESEEEEEE----TTEEE--EEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred CCcEEEEEEECCCCccCCEecC-CeEEEEEEeCEEEEEE----CCEEE--EECCCcEEEECCCCcEEeEeCCCCCEEEEE
Confidence 4578889999999999999995 6999999999999998 88866 999999999999999999999999888776
Q ss_pred Eec
Q 028365 163 SFN 165 (210)
Q Consensus 163 ~f~ 165 (210)
++-
T Consensus 105 i~f 107 (128)
T 4i4a_A 105 IWW 107 (128)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 58
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.39 E-value=2.3e-12 Score=96.60 Aligned_cols=78 Identities=14% Similarity=0.108 Sum_probs=66.5
Q ss_pred CcceEEEEEEEeCCcccc-ceecCCCCEEEE-EEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEE
Q 028365 82 GLGLSLARLDLAKGGVIP-IHTHPAASEILL-VVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGAL 159 (210)
Q Consensus 82 ~~gis~~~v~l~pgg~~~-pH~Hp~a~Ei~y-Vl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~ 159 (210)
..++.+.++.++||...+ +|||+. .|++| |++|++++.+ +++.+ .+++||++++|+|..|...|.+++++.
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~-~e~~~~vl~G~~~~~i----~~~~~--~l~~Gd~i~i~~~~~H~~~~~~~~~~~ 95 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQ-NEEIYGILSGKGFITI----DGEKI--ELQAGDWLRIAPDGKRQISAASDSPIG 95 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESS-EEEEEEEEEEEEEEEE----TTEEE--EEETTEEEEECTTCCEEEEEBTTBCEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCC-ceEEEEEEeCEEEEEE----CCEEE--EeCCCCEEEECCCCcEEEEcCCCCCEE
Confidence 445678888999999887 899976 55555 9999999998 78866 999999999999999999999988888
Q ss_pred EEEEecC
Q 028365 160 GFVSFNS 166 (210)
Q Consensus 160 ~~~~f~s 166 (210)
+++++..
T Consensus 96 ~~~i~~~ 102 (125)
T 3cew_A 96 FLCIQVK 102 (125)
T ss_dssp EEEEEEE
T ss_pred EEEEEcC
Confidence 8776543
No 59
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.38 E-value=3.4e-12 Score=96.66 Aligned_cols=75 Identities=17% Similarity=0.247 Sum_probs=59.0
Q ss_pred EEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCC-eEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEe
Q 028365 86 SLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAN-TVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSF 164 (210)
Q Consensus 86 s~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~-~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f 164 (210)
.+.++.++||+..++|+|+...|++||++|++++.+ ++ +.+ .+++||++++|+|..|...|.+++ +.++..+
T Consensus 44 ~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~----~~~~~~--~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~~ 116 (134)
T 2o8q_A 44 HVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEY----EDIGAV--MLEAGGSAFQPPGVRHRELRHSDD-LEVLEIV 116 (134)
T ss_dssp EEEEECC-----CCCEEECCSCEEEEEEESEEEEEE----TTTEEE--EEETTCEEECCTTCCEEEEEECTT-CEEEEEE
T ss_pred EEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEE----CCcEEE--EecCCCEEEECCCCcEEeEeCCCC-eEEEEEE
Confidence 456666668888999999866999999999999998 67 866 999999999999999999998774 5667666
Q ss_pred cCC
Q 028365 165 NSP 167 (210)
Q Consensus 165 ~s~ 167 (210)
...
T Consensus 117 ~p~ 119 (134)
T 2o8q_A 117 SPA 119 (134)
T ss_dssp SST
T ss_pred CCC
Confidence 644
No 60
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.37 E-value=6.9e-12 Score=92.17 Aligned_cols=74 Identities=18% Similarity=0.344 Sum_probs=64.0
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
.++.+.++.++||...++|+|+. .|++||++|++++.+ +++.+ .+++||++++|+|..|...|.+ ++.+++
T Consensus 38 ~~~~~~~~~~~~g~~~~~H~H~~-~e~~~vl~G~~~~~~----~~~~~--~l~~Gd~~~ip~~~~H~~~~~~--~~~~~~ 108 (115)
T 1yhf_A 38 QDLGITVFSLDKGQEIGRHSSPG-DAMVTILSGLAEITI----DQETY--RVAEGQTIVMPAGIPHALYAVE--AFQMLL 108 (115)
T ss_dssp TTEEEEEEEECTTCEEEEECCSS-EEEEEEEESEEEEEE----TTEEE--EEETTCEEEECTTSCEEEEESS--CEEEEE
T ss_pred CceEEEEEEECCCCccCCEECCC-cEEEEEEeCEEEEEE----CCEEE--EECCCCEEEECCCCCEEEEECC--CceEEE
Confidence 34688889999999999999975 899999999999998 78866 9999999999999999999976 466655
Q ss_pred Eec
Q 028365 163 SFN 165 (210)
Q Consensus 163 ~f~ 165 (210)
++-
T Consensus 109 v~~ 111 (115)
T 1yhf_A 109 VVV 111 (115)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 61
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.37 E-value=4.8e-12 Score=98.25 Aligned_cols=77 Identities=19% Similarity=0.279 Sum_probs=69.7
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeE-EEEEEcCCCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTV-YVKTLKKGDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~-~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
.++.+.++.++||+..++|+|+. .|++||++|++++.+ +++. + .+++||++++|+|..|+..|.+++++.++
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~----~~~~~~--~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l 118 (147)
T 2f4p_A 46 FNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQE----RGKPAR--ILKKGDVVEIPPNVVHWHGAAPDEELVHI 118 (147)
T ss_dssp SSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEEE----TTSCCE--EEETTCEEEECTTCCEEEEEBTTBCEEEE
T ss_pred CcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEEE----CCEEEE--EECCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 45789999999999999999986 999999999999998 6774 5 99999999999999999999999999888
Q ss_pred EEecC
Q 028365 162 VSFNS 166 (210)
Q Consensus 162 ~~f~s 166 (210)
+++..
T Consensus 119 ~v~~~ 123 (147)
T 2f4p_A 119 GISTQ 123 (147)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 77764
No 62
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.37 E-value=4.8e-12 Score=100.81 Aligned_cols=73 Identities=18% Similarity=0.170 Sum_probs=66.0
Q ss_pred eEEEEEEEeC-CccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEE
Q 028365 85 LSLARLDLAK-GGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVS 163 (210)
Q Consensus 85 is~~~v~l~p-gg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~ 163 (210)
+...+++++| |+...+|.|+++.|++||++|++++.+ +++.+ .|++||.+++|+|..|.+.|.++++++++.+
T Consensus 88 ~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl----~g~~~--~L~~Gds~~iP~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 88 FASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTV----CKNKF--LSVKGSTFQIPAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp CEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEE----TTEEE--EEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred ceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEE----CCEEE--EEcCCCEEEECCCCCEEEEECCCCCEEEEEE
Confidence 6777899999 777777666678999999999999999 88877 9999999999999999999999999998865
No 63
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.36 E-value=3.8e-12 Score=107.52 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=67.5
Q ss_pred CcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCC-CCEEE
Q 028365 82 GLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALG 160 (210)
Q Consensus 82 ~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~-~~a~~ 160 (210)
+..+.+.+++++||+..++|||+...|++||++|++++.+ +++.+ .|++||++++|++..|++.|.|+ +++.+
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i----~~~~~--~l~~GD~i~~~~~~~H~~~n~g~~~~~~~ 249 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNL----DNNWI--PVKKGDYIFMGAYSLQAGYGVGRGEAFSY 249 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEES----SSCEE--EEETTCEEEECSSEEEEEEEC----CEEE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEE----CCEEE--EeCCCCEEEECCCCcEEeEeCCCCcCEEE
Confidence 4457889999999999999999877899999999999998 78866 99999999999999999999999 99988
Q ss_pred EEEec
Q 028365 161 FVSFN 165 (210)
Q Consensus 161 ~~~f~ 165 (210)
+...+
T Consensus 250 l~~~d 254 (261)
T 1rc6_A 250 IYSKD 254 (261)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 86544
No 64
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.35 E-value=5.3e-12 Score=101.44 Aligned_cols=78 Identities=15% Similarity=0.094 Sum_probs=67.1
Q ss_pred ccCcceEEEEEEEeCCcccc--ceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCC
Q 028365 80 VNGLGLSLARLDLAKGGVIP--IHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADG 157 (210)
Q Consensus 80 l~~~gis~~~v~l~pgg~~~--pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~ 157 (210)
..+..+.+.+++++||+..+ +|||+ ..|++||++|++++.+ +++.+ .|++||+++||++.+|.+.|.++++
T Consensus 99 ~~~~~~~~~~~~~~pg~~~~~~~H~h~-~~E~~~Vl~G~~~~~~----~~~~~--~l~~GD~i~i~~~~~H~~~n~~~~~ 171 (192)
T 1y9q_A 99 AADTGLEIFEITLLDHHQQMSSPHALG-VIEYIHVLEGIMKVFF----DEQWH--ELQQGEHIRFFSDQPHGYAAVTEKA 171 (192)
T ss_dssp ETTTTEEEEEEEECTTCEEEECCCSTT-CEEEEEEEESCEEEEE----TTEEE--EECTTCEEEEECSSSEEEEESSSCE
T ss_pred CCCCcEEEEEEEECCCCCccCCCCCCC-CEEEEEEEEeEEEEEE----CCEEE--EeCCCCEEEEcCCCCeEeECCCCCc
Confidence 34456889999999999766 67774 4899999999999998 78866 9999999999999999999999999
Q ss_pred EEEEEEec
Q 028365 158 ALGFVSFN 165 (210)
Q Consensus 158 a~~~~~f~ 165 (210)
+ +++++.
T Consensus 172 ~-~l~v~~ 178 (192)
T 1y9q_A 172 V-FQNIVA 178 (192)
T ss_dssp E-EEEEEE
T ss_pred E-EEEEEe
Confidence 9 766654
No 65
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.35 E-value=5.7e-12 Score=105.44 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=70.9
Q ss_pred ceEEEEEEEeC-CccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 84 GLSLARLDLAK-GGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 84 gis~~~v~l~p-gg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
-+.+..++++| |+..++|||+. .|++||++|++++.+ +++.+ .+++||++++|+|..|.+.|.|++++.++.
T Consensus 144 ~~~~~~~~~~p~g~~~~~H~H~~-~e~~~Vl~G~~~~~i----~~~~~--~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~ 216 (243)
T 3h7j_A 144 WVEIMLAKIPGNGGEMPFHKHRN-EQIGICIGGGYDMTV----EGCTV--EMKFGTAYFCEPREDHGAINRSEKESKSIN 216 (243)
T ss_dssp TEEEEEEEECTTTEEEEEECCSS-EEEEEECSSCEEEEE----TTEEE--EECTTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred eeEEEEEEECCCCCcCCCEeCCC-cEEEEEEECEEEEEE----CCEEE--EECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 35677888999 88899999985 899999999999998 78866 999999999999999999999999999999
Q ss_pred EecCCCCC
Q 028365 163 SFNSPNPG 170 (210)
Q Consensus 163 ~f~s~~pg 170 (210)
++.....+
T Consensus 217 v~~p~~~d 224 (243)
T 3h7j_A 217 IFFPPRYN 224 (243)
T ss_dssp EEESCSSC
T ss_pred EEcCChhc
Confidence 88854433
No 66
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.30 E-value=2.6e-12 Score=93.67 Aligned_cols=79 Identities=18% Similarity=0.113 Sum_probs=64.3
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
-.+.+.+++++||+..++|.|+...+++|+++|++++.. . +++.....+++||++++|+|..|+..|.|++++++++
T Consensus 15 ~~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~--~-dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~ 91 (98)
T 2ozi_A 15 DEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--P-DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--T-TSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEE
T ss_pred CcEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEe--C-CCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEE
Confidence 357899999999999999999875566667788887765 2 3432234899999999999999999999999999987
Q ss_pred Ee
Q 028365 163 SF 164 (210)
Q Consensus 163 ~f 164 (210)
+-
T Consensus 92 vE 93 (98)
T 2ozi_A 92 IE 93 (98)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 67
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.30 E-value=9.5e-11 Score=99.69 Aligned_cols=106 Identities=13% Similarity=0.116 Sum_probs=80.4
Q ss_pred CCceEEecCCCCCCcc--ccCCceEEEeeccccCcccCcceEEEEEEEeCCccccc-eecCCCCEEEEEEeCEEEEEEEe
Q 028365 47 ADDFVFSGLGVAGNTT--SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPI-HTHPAASEILLVVHGCITAGFIS 123 (210)
Q Consensus 47 ~~df~f~~l~~~~~~~--~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~p-H~Hp~a~Ei~yVl~G~~~v~vv~ 123 (210)
+..++.+ .+..+... ...|...+.+... ..+..+.+.+++++||+..++ |||+ ..|++||++|++++.+
T Consensus 147 p~~~v~~-~~d~~~~~~~~~~g~~~~~l~~~----~~~~~~~~~~~~l~pg~~~~~~H~H~-~~E~~yVl~G~~~~~i-- 218 (274)
T 1sef_A 147 PYKVVGS-IHDQQPEEYEGMTDVLLWSLLPK----EFDFDMNMHILSFEPGASHAYIETHV-QEHGAYLISGQGMYNL-- 218 (274)
T ss_dssp CCCEEEE-GGGSCCEEGGGCTTEEEEECSCS----STTCSEEEEEEEECTTCBCSSCBCCS-CCEEEEEEECEEEEEE--
T ss_pred CcceeCC-hHHCCccccCCCCCeEEEEeCCc----ccCCCEEEEEEEECCCCccCcceecc-CeEEEEEEeCEEEEEE--
Confidence 3445555 44433321 2345555544332 223468899999999999888 9996 5899999999999998
Q ss_pred cCCCeEEEEEEcCCCEEEECCCCeeEEEeCCC-CCEEEEEEe
Q 028365 124 SSANTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSF 164 (210)
Q Consensus 124 ~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~-~~a~~~~~f 164 (210)
+++.+ .|++||+++||++.+|...|.++ +++.+++..
T Consensus 219 --~~~~~--~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~~ 256 (274)
T 1sef_A 219 --DNEWY--PVEKGDYIFMSAYVPQAAYAVGREEPLMYVYSK 256 (274)
T ss_dssp --TTEEE--EEETTCEEEECTTCCEEEEEECSSSCEEEEEEE
T ss_pred --CCEEE--EECCCCEEEECCCCCEEEEeCCCCCCEEEEEEE
Confidence 88866 99999999999999999999999 888877653
No 68
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.30 E-value=1.6e-11 Score=89.11 Aligned_cols=76 Identities=16% Similarity=0.256 Sum_probs=63.6
Q ss_pred CcceEEEEEEEeCCccccceecCCCCEE-EEEEeCEEEEEEEecCC-CeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEE
Q 028365 82 GLGLSLARLDLAKGGVIPIHTHPAASEI-LLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGAL 159 (210)
Q Consensus 82 ~~gis~~~v~l~pgg~~~pH~Hp~a~Ei-~yVl~G~~~v~vv~~~~-~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~ 159 (210)
+.++.+.++.+.||...++|+|+...|+ +||++|++++.+ + ++.+ .+++||++++|+|..|...|.++ +.
T Consensus 30 ~~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~----~~~~~~--~l~~Gd~~~ip~~~~H~~~~~~~--~~ 101 (110)
T 2q30_A 30 SENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVG----DGDAVI--PAPRGAVLVAPISTPHGVRAVTD--MK 101 (110)
T ss_dssp CSSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEEC----GGGCEE--EECTTEEEEEETTSCEEEEESSS--EE
T ss_pred CCCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEe----CCCEEE--EECCCCEEEeCCCCcEEEEEcCC--cE
Confidence 3356888899999999999999754788 899999999987 6 5755 99999999999999999999765 55
Q ss_pred EEEEec
Q 028365 160 GFVSFN 165 (210)
Q Consensus 160 ~~~~f~ 165 (210)
++.++.
T Consensus 102 ~l~~~~ 107 (110)
T 2q30_A 102 VLVTIA 107 (110)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 555554
No 69
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.29 E-value=2.7e-11 Score=89.19 Aligned_cols=71 Identities=13% Similarity=0.204 Sum_probs=61.2
Q ss_pred eEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEe
Q 028365 85 LSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSF 164 (210)
Q Consensus 85 is~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f 164 (210)
+.+..+.+.||...++|||+. .|++||++|++++.+ +++.+ .|++||++++|+|.+|...|. +++.++++.
T Consensus 38 ~~~~~~~~~~g~~~~~H~h~~-~e~~~vl~G~~~~~i----~~~~~--~l~~Gd~i~i~~~~~H~~~~~--~~~~~~~i~ 108 (114)
T 2ozj_A 38 VQISLFSFADGESVSEEEYFG-DTLYLILQGEAVITF----DDQKI--DLVPEDVLMVPAHKIHAIAGK--GRFKMLQIT 108 (114)
T ss_dssp EEEEEEEEETTSSCCCBCCSS-CEEEEEEEEEEEEEE----TTEEE--EECTTCEEEECTTCCBEEEEE--EEEEEEEEE
T ss_pred ceEEEEEECCCCccccEECCC-CeEEEEEeCEEEEEE----CCEEE--EecCCCEEEECCCCcEEEEeC--CCcEEEEEE
Confidence 567777889999999999975 999999999999998 78866 999999999999999999986 456665544
No 70
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.29 E-value=3.1e-11 Score=104.33 Aligned_cols=78 Identities=22% Similarity=0.224 Sum_probs=69.4
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
..+.+.++.+.||+..++|||++..|++||++|++++.+ +++.+ .|++||++++|+|..|.+.|.++ ++.++.
T Consensus 44 ~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~----~~~~~--~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~~ 116 (337)
T 1y3t_A 44 DLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL----DGERY--LLISGDYANIPAGTPHSYRMQSH-RTRLVS 116 (337)
T ss_dssp SSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE----TTEEE--EECTTCEEEECTTCCEEEEECST-TEEEEE
T ss_pred CeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE----CCEEE--EECCCCEEEECCCCcEEEEECCC-CeEEEE
Confidence 357899999999999999999867999999999999998 78866 99999999999999999999987 588887
Q ss_pred EecCC
Q 028365 163 SFNSP 167 (210)
Q Consensus 163 ~f~s~ 167 (210)
++...
T Consensus 117 ~~~p~ 121 (337)
T 1y3t_A 117 YTMKG 121 (337)
T ss_dssp EEETT
T ss_pred EECCC
Confidence 76644
No 71
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.29 E-value=2.6e-11 Score=107.17 Aligned_cols=88 Identities=15% Similarity=0.032 Sum_probs=74.7
Q ss_pred CCceEEEeecc-ccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEEC
Q 028365 65 INAAVTPAFVA-QFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFP 143 (210)
Q Consensus 65 ~gg~~~~~~~~-~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P 143 (210)
.|+.+..++.. .++.+.++ ++....++||++.++|||+. .|+.||++|++++.+ +++.+ .+++||++++|
T Consensus 249 ~G~~~~~~np~t~~~~~~ti--~~~~~~l~pG~~~~~H~h~~-~ev~~v~~G~g~~~v----~~~~~--~~~~GD~~~vP 319 (354)
T 2d40_A 249 DGYKMRYVNPVTGGYPMPSM--GAFLQLLPKGFASRVARTTD-STIYHVVEGSGQVII----GNETF--SFSAKDIFVVP 319 (354)
T ss_dssp TBEEEEECCTTTSSCSSSSC--EEEEEEECTTCBCCCBEESS-CEEEEEEEEEEEEEE----TTEEE--EEETTCEEEEC
T ss_pred CCeEEEEeCCCcCCCCCCcc--eeEEEEECCCCCCCceecCC-cEEEEEEeCeEEEEE----CCEEE--EEcCCCEEEEC
Confidence 47788888844 67777774 55567899999999999987 599999999999999 78866 99999999999
Q ss_pred CCCeeEEEeCCCCCEEEEEE
Q 028365 144 QGLLHFQVNSGADGALGFVS 163 (210)
Q Consensus 144 ~g~~H~~~N~g~~~a~~~~~ 163 (210)
++..|++.|. +++.++++
T Consensus 320 ~~~~H~~~n~--e~~~l~~~ 337 (354)
T 2d40_A 320 TWHGVSFQTT--QDSVLFSF 337 (354)
T ss_dssp TTCCEEEEEE--EEEEEEEE
T ss_pred CCCeEEEEeC--CCEEEEEE
Confidence 9999999993 67777765
No 72
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.28 E-value=2e-11 Score=107.78 Aligned_cols=75 Identities=21% Similarity=0.278 Sum_probs=67.2
Q ss_pred ceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEE-EEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITA-GFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v-~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
.+.+..+.++||+..++|+|+ ..|+.||++|++++ .+ +++.+ .+++||++++|+|..|...|.+++++.++.
T Consensus 99 ~l~~~~~~l~PG~~~~~H~H~-~~e~~yVl~G~g~~t~v----~g~~~--~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~ 171 (354)
T 2d40_A 99 TLYAGLQLIMPGEVAPSHRHN-QSALRFIVEGKGAFTAV----DGERT--PMNEGDFILTPQWRWHDHGNPGDEPVIWLD 171 (354)
T ss_dssp SCEEEEEEECTTCEEEEEEES-SCEEEEEEECSSCEEEE----TTEEE--ECCTTCEEEECTTSCEEEECCSSSCEEEEE
T ss_pred cEEEEEEEECCCCCcCCeecC-cceEEEEEEEEEEEEEE----CCEEE--EEcCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 578899999999999999996 58999999999988 55 67866 999999999999999999999999998887
Q ss_pred Eec
Q 028365 163 SFN 165 (210)
Q Consensus 163 ~f~ 165 (210)
+.+
T Consensus 172 v~d 174 (354)
T 2d40_A 172 GLD 174 (354)
T ss_dssp EEC
T ss_pred EEC
Confidence 654
No 73
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.28 E-value=5.9e-11 Score=89.27 Aligned_cols=74 Identities=18% Similarity=0.228 Sum_probs=61.6
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
..+++..++++||+...+ |....|++||++|++++.+ +++.+ .|++||+++||+|..|.+.|.+ +++.++.
T Consensus 38 ~~~~~~~~~~~pG~~~~~--H~~~~E~~~Vl~G~~~~~~----~g~~~--~l~~GD~v~ip~g~~H~~~~~~-~~~~~l~ 108 (119)
T 3lwc_A 38 GPITIGYGRYAPGQSLTE--TMAVDDVMIVLEGRLSVST----DGETV--TAGPGEIVYMPKGETVTIRSHE-EGALTAY 108 (119)
T ss_dssp CCCEEEEEEECTTCEEEE--ECSSEEEEEEEEEEEEEEE----TTEEE--EECTTCEEEECTTCEEEEEEEE-EEEEEEE
T ss_pred CCEEEEEEEECCCCCcCc--cCCCCEEEEEEeCEEEEEE----CCEEE--EECCCCEEEECCCCEEEEEcCC-CCeEEEE
Confidence 347888899999986554 5567999999999999998 78866 9999999999999999998865 6677666
Q ss_pred Eec
Q 028365 163 SFN 165 (210)
Q Consensus 163 ~f~ 165 (210)
+..
T Consensus 109 v~~ 111 (119)
T 3lwc_A 109 VTY 111 (119)
T ss_dssp EEE
T ss_pred EEC
Confidence 554
No 74
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.23 E-value=5e-11 Score=99.69 Aligned_cols=73 Identities=12% Similarity=0.077 Sum_probs=65.3
Q ss_pred EEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEE-ECCCCeeEEEeCCCCCEEEEEEe
Q 028365 86 SLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMI-FPQGLLHFQVNSGADGALGFVSF 164 (210)
Q Consensus 86 s~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~-~P~g~~H~~~N~g~~~a~~~~~f 164 (210)
.+..+.++||...++|||+ ..|++||++|++++.+ +++.+ .|++||.++ +|+|..|.+.|.++++++++.+.
T Consensus 35 ~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~~----~~~~~--~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i~ 107 (243)
T 3h7j_A 35 EVLMSYVPPHTNVEPHQHK-EVQIGMVVSGELMMTV----GDVTR--KMTALESAYIAPPHVPHGARNDTDQEVIAIDIK 107 (243)
T ss_dssp EEEEEEECTTEEEEEECCS-SEEEEEEEESEEEEEE----TTEEE--EEETTTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred EEEEEEECCCCccCCEECC-CcEEEEEEEeEEEEEE----CCEEE--EECCCCEEEEcCCCCcEeeEeCCCCcEEEEEEe
Confidence 5666779999999999998 5999999999999998 78866 999999985 99999999999999999988764
Q ss_pred c
Q 028365 165 N 165 (210)
Q Consensus 165 ~ 165 (210)
.
T Consensus 108 r 108 (243)
T 3h7j_A 108 R 108 (243)
T ss_dssp E
T ss_pred c
Confidence 3
No 75
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.22 E-value=1.8e-10 Score=99.60 Aligned_cols=74 Identities=16% Similarity=0.102 Sum_probs=63.5
Q ss_pred EEEEEEeC-CccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEec
Q 028365 87 LARLDLAK-GGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFN 165 (210)
Q Consensus 87 ~~~v~l~p-gg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~ 165 (210)
...+.+.| |...++|||+...|++||++|++++.+ +++.+ .|++||++++|++..|++.|.++ ++.++.++.
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i----~~~~~--~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~ 291 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWT----DGQEI--QLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLV 291 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEE----TTEEE--EECTTCEEEECTTCCEEEEECSS-SEEEEEEEE
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEE----CCEEE--EECCCCEEEECCCCeEEEEECCC-CeEEEEEEc
Confidence 34456666 567899999867999999999999998 78866 99999999999999999999988 898888876
Q ss_pred CC
Q 028365 166 SP 167 (210)
Q Consensus 166 s~ 167 (210)
..
T Consensus 292 ~~ 293 (337)
T 1y3t_A 292 PG 293 (337)
T ss_dssp SS
T ss_pred Cc
Confidence 44
No 76
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.21 E-value=8.3e-11 Score=90.20 Aligned_cols=72 Identities=14% Similarity=0.091 Sum_probs=61.7
Q ss_pred ceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEE
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVS 163 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~ 163 (210)
.+.+..++++|| ..|||....|++||++|++++.+ +++.+ .|++||+++||+|..|.+.| .++++++.+
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~----~g~~~--~l~~GD~i~~p~g~~h~~~~--~~~~~~l~v 124 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRH----EGETM--IAKAGDVMFIPKGSSIEFGT--PTSVRFLYV 124 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEE----TTEEE--EEETTCEEEECTTCEEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEE----CCEEE--EECCCcEEEECCCCEEEEEe--CCCEEEEEE
Confidence 578888999999 56777677999999999999998 78866 99999999999999999987 457777776
Q ss_pred ecC
Q 028365 164 FNS 166 (210)
Q Consensus 164 f~s 166 (210)
+..
T Consensus 125 ~~p 127 (133)
T 2pyt_A 125 AWP 127 (133)
T ss_dssp EES
T ss_pred EcC
Confidence 653
No 77
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.20 E-value=4.1e-11 Score=85.75 Aligned_cols=66 Identities=23% Similarity=0.519 Sum_probs=53.0
Q ss_pred cccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCC
Q 028365 79 AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSG 154 (210)
Q Consensus 79 ~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g 154 (210)
.+++..+.+.++ . +..++|||+...|++||++|++++.+ +++.+ .+++||++++|+|..|...|.+
T Consensus 27 ~~~~~~~~~~~~--~--~~~~~H~H~~~~e~~~v~~G~~~~~~----~~~~~--~l~~Gd~~~ip~~~~H~~~~~~ 92 (102)
T 3d82_A 27 EMNDYQFKLVKV--E--GEFVWHEHADTDEVFIVMEGTLQIAF----RDQNI--TLQAGEMYVIPKGVEHKPMAKE 92 (102)
T ss_dssp EETTEEEEEEEE--E--EECCCBCCTTCCEEEEEEESEEEEEC----SSCEE--EEETTEEEEECTTCCBEEEEEE
T ss_pred ecCCCEEEEEEE--C--CCCCceeCCCCcEEEEEEeCEEEEEE----CCEEE--EEcCCCEEEECCCCeEeeEcCC
Confidence 334444444444 3 45899999876999999999999988 77756 9999999999999999999963
No 78
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.20 E-value=2.1e-10 Score=90.37 Aligned_cols=72 Identities=19% Similarity=0.157 Sum_probs=59.5
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEe--CEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVH--GCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALG 160 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~--G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~ 160 (210)
..+++..+++ ++..++|||+...|++||++ |++++.+ +++.+ .+++||+++||+|..|.+.+ ++.+
T Consensus 45 fp~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~i----dge~~--~l~~GD~v~IPpg~~H~i~g----~l~~ 112 (157)
T 4h7l_A 45 TSVSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIEL----NGQSY--PLTKLLAISIPPLVRHRIVG----EATI 112 (157)
T ss_dssp CSCEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEE----TTEEE--ECCTTEEEEECTTCCEEEES----CEEE
T ss_pred CcEEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEE----CCEEE--EeCCCCEEEECCCCeEeeEC----CEEE
Confidence 3345655555 44579999987789999999 9999999 88866 99999999999999999873 6888
Q ss_pred EEEecC
Q 028365 161 FVSFNS 166 (210)
Q Consensus 161 ~~~f~s 166 (210)
++++..
T Consensus 113 L~I~~P 118 (157)
T 4h7l_A 113 INIVSP 118 (157)
T ss_dssp EEEEES
T ss_pred EEEECC
Confidence 887764
No 79
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.19 E-value=4.3e-11 Score=87.18 Aligned_cols=68 Identities=22% Similarity=0.363 Sum_probs=54.3
Q ss_pred EEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCC-eEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 86 SLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAN-TVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 86 s~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~-~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
...++.+.||. .++|+|+...|++||++|++++.+ ++ +.+ .+++||++++|+|..|...|. +++.++.
T Consensus 29 ~~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~----~~~~~~--~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~ 97 (107)
T 2i45_A 29 FQFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDF----ADGGSM--TIREGEMAVVPKSVSHRPRSE--NGCSLVL 97 (107)
T ss_dssp EEEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEE----TTSCEE--EECTTEEEEECTTCCEEEEEE--EEEEEEE
T ss_pred CEEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEE----CCCcEE--EECCCCEEEECCCCcEeeEeC--CCeEEEE
Confidence 34456677876 469999866999999999999998 66 766 999999999999999999994 4555553
No 80
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.18 E-value=2.5e-10 Score=95.79 Aligned_cols=76 Identities=16% Similarity=0.231 Sum_probs=67.6
Q ss_pred CcceEEEEEEEeCCccccc-eecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEE
Q 028365 82 GLGLSLARLDLAKGGVIPI-HTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALG 160 (210)
Q Consensus 82 ~~gis~~~v~l~pgg~~~p-H~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~ 160 (210)
+..+.+.+++++||+..+. |.| ...|.+||++|++.+.+ +++.+ .|++||+++++.+.+|++.|.|++++.+
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h-~~ee~~~vLeG~~~~~~----~~~~~--~l~~GD~~~~~~~~pH~~~n~g~~~~~y 234 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVH-YMEHGLLMLEGEGLYKL----EENYY--PVTAGDIIWMGAHCPQWYGALGRNWSKY 234 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCC-SSCEEEEEEECEEEEEE----TTEEE--EEETTCEEEECTTCCEEEEEESSSCEEE
T ss_pred CCCeEEEEEEECCCCccCcccCC-CceEEEEEEECEEEEEE----CCEEE--EcCCCCEEEECCCCCEEEEcCCCCCEEE
Confidence 5578999999999998886 455 56899999999999998 88977 9999999999999999999999999987
Q ss_pred EEEe
Q 028365 161 FVSF 164 (210)
Q Consensus 161 ~~~f 164 (210)
+..=
T Consensus 235 l~~k 238 (246)
T 1sfn_A 235 LLYK 238 (246)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7543
No 81
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.16 E-value=2e-10 Score=95.10 Aligned_cols=72 Identities=17% Similarity=0.274 Sum_probs=63.0
Q ss_pred ceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEE
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVS 163 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~ 163 (210)
.+.+..+.++||...++|+|+. .|++||++|++++.+ +++.+ .+++||.+++|+|.+|+..|. .+++.++.+
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i----~g~~~--~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll~ 223 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAPG-DALVTVLDGEGKYYV----DGKPF--IVKKGESAVLPANIPHAVEAE-TENFKMLLI 223 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCSS-EEEEEEEEEEEEEEE----TTEEE--EEETTEEEEECTTSCEEEECC-SSCEEEEEE
T ss_pred CeEEEEEEECCCCccCCEECCC-cEEEEEEeEEEEEEE----CCEEE--EECCCCEEEECCCCcEEEEeC-CCCEEEEEE
Confidence 4688899999999999999984 899999999999998 88866 999999999999999999983 456666544
No 82
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.16 E-value=1.3e-10 Score=98.12 Aligned_cols=77 Identities=22% Similarity=0.231 Sum_probs=67.4
Q ss_pred cceEEEEEEEeCCccccceec-CCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTH-PAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~H-p~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
..+.+.+++++||+....|.| +...|++||++|++++.+ +++.+ .|++||.+++|++.+|.+.|.+++++.++
T Consensus 57 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~----~~~~~--~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l 130 (261)
T 1rc6_A 57 ASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKA----EGKTF--ALSEGGYLYCPPGSLMTFVNAQAEDSQIF 130 (261)
T ss_dssp CSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEE----TTEEE--EEETTEEEEECTTCCCEEEECSSSCEEEE
T ss_pred CcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEE----CCEEE--EECCCCEEEECCCCCEEEEeCCCCCEEEE
Confidence 357888999999998766654 456789999999999998 88866 99999999999999999999999999998
Q ss_pred EEec
Q 028365 162 VSFN 165 (210)
Q Consensus 162 ~~f~ 165 (210)
++..
T Consensus 131 ~v~~ 134 (261)
T 1rc6_A 131 LYKR 134 (261)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8764
No 83
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.14 E-value=1.3e-10 Score=99.29 Aligned_cols=77 Identities=19% Similarity=0.178 Sum_probs=67.7
Q ss_pred CcceEEEEEEEeCCccc--cceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEE
Q 028365 82 GLGLSLARLDLAKGGVI--PIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGAL 159 (210)
Q Consensus 82 ~~gis~~~v~l~pgg~~--~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~ 159 (210)
+..+.+.+++++||+.. +.|.|+ ..|++||++|++++.+ +++.+ .|++||.+++|+|..|.+.|.+++++.
T Consensus 65 ~~~~~~~~~~l~PG~~~~~~~h~H~-~eE~~~Vl~G~l~v~v----~g~~~--~L~~GD~i~ip~~~~H~~~N~g~~~~~ 137 (278)
T 1sq4_A 65 AETFSQYIVELAPNGGSDKPEQDPN-AEAVLFVVEGELSLTL----QGQVH--AMQPGGYAFIPPGADYKVRNTTGQHTR 137 (278)
T ss_dssp CCSCEEEEEEEEEEEEESSCCCCTT-EEEEEEEEESCEEEEE----SSCEE--EECTTEEEEECTTCCEEEECCSSSCEE
T ss_pred CCcEEEEEEEECCCCccCCCCcCCC-ceEEEEEEeCEEEEEE----CCEEE--EECCCCEEEECCCCcEEEEECCCCCEE
Confidence 34578999999999876 567785 6999999999999998 78866 999999999999999999999999999
Q ss_pred EEEEec
Q 028365 160 GFVSFN 165 (210)
Q Consensus 160 ~~~~f~ 165 (210)
++++..
T Consensus 138 ~l~v~~ 143 (278)
T 1sq4_A 138 FHWIRK 143 (278)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 887764
No 84
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.12 E-value=3.5e-10 Score=99.57 Aligned_cols=78 Identities=17% Similarity=0.056 Sum_probs=61.5
Q ss_pred ceEEEEEEEeCCcc-cc--ceecCCCCEEEEEEeCEEEEEEEecCCC--eEEEEEEcCCCEEEECCCCeeEEEeCCCCCE
Q 028365 84 GLSLARLDLAKGGV-IP--IHTHPAASEILLVVHGCITAGFISSSAN--TVYVKTLKKGDIMIFPQGLLHFQVNSGADGA 158 (210)
Q Consensus 84 gis~~~v~l~pgg~-~~--pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~--~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a 158 (210)
.+.+. ..+.|++. .+ +|||++..|++||++|++++.+-+. ++ +.+ .|++||++++|+|.+|.+.|.++++
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~-~g~~~~~--~L~~GD~v~ip~g~~H~~~n~~~~~- 121 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSG-NETQQTR--VLSSGDYGSVPRNVTHTFQIQDPDT- 121 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEET-TSCCEEE--EEETTCEEEECTTEEEEEEECSTTE-
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCc-CCceEEE--EECCCCEEEECCCCcEEEEeCCCCC-
Confidence 35666 45566654 55 9999878999999999999998442 12 544 9999999999999999999998876
Q ss_pred EEEEEecC
Q 028365 159 LGFVSFNS 166 (210)
Q Consensus 159 ~~~~~f~s 166 (210)
.++.++..
T Consensus 122 ~~l~v~~p 129 (350)
T 1juh_A 122 EMTGVIVP 129 (350)
T ss_dssp EEEEEEES
T ss_pred EEEEEEcC
Confidence 77766654
No 85
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.11 E-value=4.4e-10 Score=83.24 Aligned_cols=74 Identities=18% Similarity=0.243 Sum_probs=57.5
Q ss_pred ceEEEEEEEeCCccccc---eecCCCCEEEEEEeCEEEEEEEecCCCeE--EEEEEcCCCEEEECCCCeeEEEeCCCC-C
Q 028365 84 GLSLARLDLAKGGVIPI---HTHPAASEILLVVHGCITAGFISSSANTV--YVKTLKKGDIMIFPQGLLHFQVNSGAD-G 157 (210)
Q Consensus 84 gis~~~v~l~pgg~~~p---H~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~--~~~~l~~GDv~~~P~g~~H~~~N~g~~-~ 157 (210)
++.+.++. .+|...++ |.| ...|++||++|++++.+ +++. + .|++||+++||+|..|.+.|.+++ +
T Consensus 30 ~~~i~~i~-~~g~~~~~~~~~~~-~~~E~~~Vl~G~~~l~~----~~~~~~~--~l~~Gd~i~ipa~~~H~~~n~~~~~~ 101 (112)
T 2opk_A 30 GLKIERII-SNGQASPPGFWYDS-PQDEWVMVVSGSAGIEC----EGDTAPR--VMRPGDWLHVPAHCRHRVAWTDGGEP 101 (112)
T ss_dssp TEEEEEEE-ESSCCCCTTCCBCC-SSEEEEEEEESCEEEEE----TTCSSCE--EECTTEEEEECTTCCEEEEEECSSSC
T ss_pred CEEEEEEE-eCCccCCCCccccC-CccEEEEEEeCeEEEEE----CCEEEEE--EECCCCEEEECCCCcEEEEeCCCCCC
Confidence 45566664 44555444 445 56899999999999998 6775 5 999999999999999999999976 5
Q ss_pred EEEEEEec
Q 028365 158 ALGFVSFN 165 (210)
Q Consensus 158 a~~~~~f~ 165 (210)
+++++++.
T Consensus 102 ~~~l~v~~ 109 (112)
T 2opk_A 102 TVWLAVHC 109 (112)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 66676664
No 86
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.10 E-value=1.7e-09 Score=96.81 Aligned_cols=89 Identities=18% Similarity=0.090 Sum_probs=72.2
Q ss_pred eEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCe
Q 028365 68 AVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLL 147 (210)
Q Consensus 68 ~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~ 147 (210)
.+..++..+ .+-....+.+....++||+..++|.|.. .|++||++|++.+.+ +++.+ .+++||++++|+|..
T Consensus 278 ~l~l~nP~~-g~~~~~tl~~~~~~l~PG~~~~~HrH~~-~~v~~VleG~G~~~V----~ge~~--~~~~GD~~~iP~g~~ 349 (394)
T 3bu7_A 278 ILRYTNPQT-GGHPMLTMGASMQMLRPGEHTKAHRHTG-NVIYNVAKGQGYSIV----GGKRF--DWSEHDIFCVPAWTW 349 (394)
T ss_dssp EEEECCTTT-SSCSSSSCEEEEEEECTTCBCCCEEESS-CEEEEEEECCEEEEE----TTEEE--EECTTCEEEECTTCC
T ss_pred EEEEeCCCC-CCCCCCeeeEEEEEECCCCcCCCcccCC-cEEEEEEeCeEEEEE----CCEEE--EEeCCCEEEECCCCe
Confidence 444445442 2222234688889999999999999975 799999999998888 78866 999999999999999
Q ss_pred eEEEeCC-CCCEEEEEEe
Q 028365 148 HFQVNSG-ADGALGFVSF 164 (210)
Q Consensus 148 H~~~N~g-~~~a~~~~~f 164 (210)
|...|.| ++++.++++-
T Consensus 350 H~~~N~g~~e~~~ll~i~ 367 (394)
T 3bu7_A 350 HEHCNTQERDDACLFSFN 367 (394)
T ss_dssp EEEEECCSSCCEEEEEEE
T ss_pred EEeEeCCCCCCeEEEEee
Confidence 9999998 7898888764
No 87
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.10 E-value=6e-10 Score=92.23 Aligned_cols=73 Identities=14% Similarity=0.014 Sum_probs=65.2
Q ss_pred ceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEE
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVS 163 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~ 163 (210)
+..+.++.+.||...++|.||. .|++||++|++++.+ +++.+ .|++||.+++|+|.+|.+.+. +++.++.+
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~~-~~~~~Vl~G~~~~~i----~~~~~--~l~~Gd~~~~p~~~~H~~~a~--~~~~~l~i 106 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAMLG-NRYYYCFNGNGEIFI----ENNKK--TISNGDFLEITANHNYSIEAR--DNLKLIEI 106 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCSS-CEEEEEEESEEEEEE----SSCEE--EEETTEEEEECSSCCEEEEES--SSEEEEEE
T ss_pred CcEEEEEEECCCCccCccccCC-CEEEEEEeCEEEEEE----CCEEE--EECCCCEEEECCCCCEEEEEC--CCcEEEEE
Confidence 4688899999999999999985 999999999999998 78855 999999999999999999985 56888876
Q ss_pred ec
Q 028365 164 FN 165 (210)
Q Consensus 164 f~ 165 (210)
+.
T Consensus 107 ~~ 108 (227)
T 3rns_A 107 GE 108 (227)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 88
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.09 E-value=2.5e-10 Score=97.07 Aligned_cols=78 Identities=13% Similarity=0.137 Sum_probs=67.2
Q ss_pred CcceEEEEEEEeCCccccceec-CCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEE
Q 028365 82 GLGLSLARLDLAKGGVIPIHTH-PAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALG 160 (210)
Q Consensus 82 ~~gis~~~v~l~pgg~~~pH~H-p~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~ 160 (210)
+..+.+.+++++||+....|.| +...|++||++|++++.+ +++.+ .|++||.++||++.+|.+.|.+++++.+
T Consensus 59 ~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~----~~~~~--~L~~GD~~~~~~~~~H~~~N~~~~~~~~ 132 (274)
T 1sef_A 59 GATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSD----GQETH--ELEAGGYAYFTPEMKMYLANAQEADTEV 132 (274)
T ss_dssp TCSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEEC----SSCEE--EEETTEEEEECTTSCCEEEESSSSCEEE
T ss_pred CCcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEE----CCEEE--EECCCCEEEECCCCCEEEEeCCCCCEEE
Confidence 3457889999999997765554 456789999999999998 78866 9999999999999999999999999998
Q ss_pred EEEec
Q 028365 161 FVSFN 165 (210)
Q Consensus 161 ~~~f~ 165 (210)
+++..
T Consensus 133 l~v~~ 137 (274)
T 1sef_A 133 FLYKK 137 (274)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87763
No 89
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.09 E-value=6e-10 Score=91.86 Aligned_cols=76 Identities=20% Similarity=0.152 Sum_probs=67.6
Q ss_pred CcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCC-CeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEE
Q 028365 82 GLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALG 160 (210)
Q Consensus 82 ~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~-~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~ 160 (210)
+..+.+..+.+.||...|.|.|+ ..|+.||++|++++.+ + ++.+ .+++||++++|+|+.|.++ ++++|+..
T Consensus 129 s~~l~lG~v~l~PG~~yP~HsHp-~EEiy~VLsG~~e~~v----~~g~~~--~l~pGd~v~ipsgv~Ha~r-t~dePlla 200 (217)
T 4b29_A 129 TQSLRVTVGYWGPGLDYGWHEHL-PEELYSVVSGRALFHL----RNAPDL--MLEPGQTRFHPANAPHAMT-TLTDPILT 200 (217)
T ss_dssp CSSCEEEEEEECSSCEEEEEECS-SEEEEEEEEECEEEEE----TTSCCE--EECTTCEEEECTTCCEEEE-CCSSCEEE
T ss_pred CCeEEEEEEEECCCCcCCCCCCC-CceEEEEEeCCEEEEE----CCCCEE--ecCCCCEEEcCCCCceeEE-ECCccEEE
Confidence 44588999999999999999998 5999999999999998 4 6644 9999999999999999998 58899988
Q ss_pred EEEec
Q 028365 161 FVSFN 165 (210)
Q Consensus 161 ~~~f~ 165 (210)
+.+..
T Consensus 201 lwvW~ 205 (217)
T 4b29_A 201 LVLWR 205 (217)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88775
No 90
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.09 E-value=1.6e-09 Score=92.28 Aligned_cols=84 Identities=12% Similarity=0.243 Sum_probs=71.6
Q ss_pred eEEEeeccccCcccCcceEEEEEEEeCCccccc-eecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCC
Q 028365 68 AVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPI-HTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGL 146 (210)
Q Consensus 68 ~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~p-H~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~ 146 (210)
..+.+..++. +..+.+.+++++||+..+. |.|. ..|.+||++|++.+.+ +++.+ .+++||+++++++.
T Consensus 173 ~~r~l~p~~~----~~d~~~~~~t~~PG~~~p~~e~H~-~eh~~~vL~G~g~y~l----~~~~~--~V~~GD~i~~~~~~ 241 (266)
T 4e2q_A 173 ELRKLLPMSV----AYDFNIHTMDFQPGEFLNVKEVHY-NQHGLLLLEGQGIYRL----GDNWY--PVQAGDVIWMAPFV 241 (266)
T ss_dssp EEEESSCCST----TCSEEEEEEEECTTCBCSSCCCCS-CCEEEEEEECEEEEEE----TTEEE--EEETTCEEEECTTC
T ss_pred EEEEccCccc----ccceEEEEEEECCCcCcCCceEcc-cceEEEEEeceEEEEE----CCEEE--EecCCCEEEECCCC
Confidence 3444544442 5568999999999999986 7775 5899999999999998 88866 99999999999999
Q ss_pred eeEEEeCCCCCEEEEE
Q 028365 147 LHFQVNSGADGALGFV 162 (210)
Q Consensus 147 ~H~~~N~g~~~a~~~~ 162 (210)
+|++.|.|++++.+|.
T Consensus 242 ~h~~~n~G~e~~~yl~ 257 (266)
T 4e2q_A 242 PQWYAALGKTRSRYLL 257 (266)
T ss_dssp CEEEEEESSSCEEEEE
T ss_pred cEEEEeCCCCCEEEEE
Confidence 9999999999998875
No 91
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.09 E-value=8.2e-10 Score=86.55 Aligned_cols=72 Identities=14% Similarity=0.105 Sum_probs=59.4
Q ss_pred ceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEE
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVS 163 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~ 163 (210)
.+++..++++ ++ +.|||....|+.||++|++++.+ +++.+ .+++||+++||+|..|.+.|. ++++++.+
T Consensus 65 ~~s~g~~~~e-~~--~~~~~~~~eE~~yVLeG~~~l~i----~g~~~--~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V 133 (151)
T 4axo_A 65 RLGCGMMEMK-ET--TFDWTLNYDEIDYVIDGTLDIII----DGRKV--SASSGELIFIPKGSKIQFSVP--DYARFIYV 133 (151)
T ss_dssp SCEEEEEEEE-EE--EEEEECSSEEEEEEEEEEEEEEE----TTEEE--EEETTCEEEECTTCEEEEEEE--EEEEEEEE
T ss_pred cEEEEEEEEc-Cc--cccEeCCCcEEEEEEEeEEEEEE----CCEEE--EEcCCCEEEECCCCEEEEEeC--CCEEEEEE
Confidence 3677777776 33 45677778999999999999998 78866 999999999999999999996 67887776
Q ss_pred ecC
Q 028365 164 FNS 166 (210)
Q Consensus 164 f~s 166 (210)
...
T Consensus 134 ~~P 136 (151)
T 4axo_A 134 TYP 136 (151)
T ss_dssp EEC
T ss_pred ECC
Confidence 654
No 92
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.08 E-value=5.6e-10 Score=98.99 Aligned_cols=77 Identities=17% Similarity=0.176 Sum_probs=68.8
Q ss_pred CcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEE-EEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEE
Q 028365 82 GLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCIT-AGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALG 160 (210)
Q Consensus 82 ~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~-v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~ 160 (210)
+-.+.+....+.||+..++|.|.. .|+.||++|++. +.+ +++.+ .+++||++++|.|..|...|.|++++++
T Consensus 100 t~~L~a~~~~l~PG~~~~~HrH~~-~ev~~VleG~G~~~~v----dG~~~--~~~~GD~v~iP~g~~H~~~N~gde~l~~ 172 (368)
T 3nw4_A 100 SPTMWAAIQYLGPRETAPEHRHSQ-NAFRFVVEGEGVWTVV----NGDPV--RMSRGDLLLTPGWCFHGHMNDTDQPMAW 172 (368)
T ss_dssp SSSCEEEEEEECTTCEEEEEEESS-CEEEECSSCEEEEEEE----TTEEE--EEETTCEEEECTTCCEEEEECSSSCEEE
T ss_pred CCceEEEEEEECCCCccCceeccc-ceEEEEEecceEEEEE----CCEEE--EEeCCCEEEECCCCcEEeEeCCCCCeEE
Confidence 345889999999999999999975 799999999995 655 78866 9999999999999999999999999999
Q ss_pred EEEec
Q 028365 161 FVSFN 165 (210)
Q Consensus 161 ~~~f~ 165 (210)
+.+++
T Consensus 173 l~v~D 177 (368)
T 3nw4_A 173 IDGLD 177 (368)
T ss_dssp EEEEC
T ss_pred EEecc
Confidence 87764
No 93
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.07 E-value=7.9e-10 Score=94.50 Aligned_cols=81 Identities=17% Similarity=0.182 Sum_probs=71.2
Q ss_pred CcccCcceEEEEEEEeCCccccc-eecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCC
Q 028365 78 PAVNGLGLSLARLDLAKGGVIPI-HTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD 156 (210)
Q Consensus 78 P~l~~~gis~~~v~l~pgg~~~p-H~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~ 156 (210)
|.-....+.+.+++++||+.++. |.| ...|.+||++|++.+.+ +++.+ .|++||+++++.+..|++.|.|++
T Consensus 184 p~~~~~~~~~~~~~l~pG~~i~~~~~h-~~e~~~~il~G~~~~~~----~~~~~--~v~~GD~~~~~~~~~h~~~n~g~~ 256 (278)
T 1sq4_A 184 MSDMRHDMHVNIVNFEPGGVIPFAETH-VMEHGLYVLEGKAVYRL----NQDWV--EVEAGDFMWLRAFCPQACYSGGPG 256 (278)
T ss_dssp TTCTTCSEEEEEEEECSSSEESCCCCC-SEEEEEEEEECEEEEEE----TTEEE--EEETTCEEEEEESCCEEEECCSSS
T ss_pred CCCcCCCeEEEEEEECCCCCcCCCCCC-CccEEEEEEeCEEEEEE----CCEEE--EeCCCCEEEECCCCCEEEEcCCCC
Confidence 43345678999999999999987 455 55899999999999998 88866 999999999999999999999999
Q ss_pred CEEEEEEec
Q 028365 157 GALGFVSFN 165 (210)
Q Consensus 157 ~a~~~~~f~ 165 (210)
+++++...+
T Consensus 257 ~~~yl~~~d 265 (278)
T 1sq4_A 257 RFRYLLYKD 265 (278)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999988775
No 94
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.06 E-value=1.1e-09 Score=98.03 Aligned_cols=78 Identities=15% Similarity=0.140 Sum_probs=68.8
Q ss_pred CcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEe-CCCCCEEE
Q 028365 82 GLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVN-SGADGALG 160 (210)
Q Consensus 82 ~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N-~g~~~a~~ 160 (210)
+..+.+....+.||+..++|.|.. .|+.||++|++.+..+ +++.+ .+++||++++|+|..|...| .|++++++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~~-~ev~~IleG~G~~t~v---~G~~~--~~~~GD~i~~P~g~~H~~~N~~gde~l~~ 193 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHAA-SALRFIMEGSGAYTIV---DGHKV--ELGANDFVLTPNGTWHEHGILESGTECIW 193 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEESS-CEEEEEEECSCEEEEE---TTEEE--EECTTCEEEECTTCCEEEEECTTCCCEEE
T ss_pred CCeeEEEEEEECCCCCcCCccCCc-ceEEEEEEeeEEEEEE---CCEEE--EEcCCCEEEECcCCCEEEEcCCCCCCEEE
Confidence 446888999999999999999976 6999999999976333 68866 99999999999999999999 99999999
Q ss_pred EEEec
Q 028365 161 FVSFN 165 (210)
Q Consensus 161 ~~~f~ 165 (210)
+++.+
T Consensus 194 l~v~d 198 (394)
T 3bu7_A 194 QDGLD 198 (394)
T ss_dssp EEEEC
T ss_pred EEccc
Confidence 97663
No 95
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.99 E-value=1.7e-09 Score=91.99 Aligned_cols=88 Identities=13% Similarity=0.089 Sum_probs=70.4
Q ss_pred CCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCC-CeEEEEEEcCCCEEEEC
Q 028365 65 INAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFP 143 (210)
Q Consensus 65 ~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~-~~~~~~~l~~GDv~~~P 143 (210)
.|+.++.+-... + +..+.+.+++++||+..+.|.| ...|++||++|++++.+ + ++.+ .|++||.+++|
T Consensus 54 ~~~~~~vL~sP~---~-G~~f~~~lv~l~PGg~s~~~~h-~~EEfiyVleG~l~l~l----~~g~~~--~L~~Gds~y~p 122 (266)
T 4e2q_A 54 TNTLGAYLITPA---T-GSHFVMYLAKMKEMSSSGLPPQ-DIERLIFVVEGAVTLTN----TSSSSK--KLTVDSYAYLP 122 (266)
T ss_dssp SSEEEEEEECGG---G-TCSSEEEEEEECSSEECCCCCT-TEEEEEEEEEECEEEEC------CCCE--EECTTEEEEEC
T ss_pred cCEEEEEEcCCC---C-CCcEEEEEEEECcCCcCCCCCC-CCeEEEEEEEEEEEEEE----CCCcEE--EEcCCCEEEEC
Confidence 355555554433 2 3457899999999998888877 57999999999999998 6 7866 99999999999
Q ss_pred CCCeeEEEeCCCCCEEEEEEec
Q 028365 144 QGLLHFQVNSGADGALGFVSFN 165 (210)
Q Consensus 144 ~g~~H~~~N~g~~~a~~~~~f~ 165 (210)
++..|.+.|. ++++++++-.
T Consensus 123 ~~~~H~~~N~--~~Ar~l~V~k 142 (266)
T 4e2q_A 123 PNFHHSLDCV--ESATLVVFER 142 (266)
T ss_dssp TTCCCEEEES--SCEEEEEEEE
T ss_pred CCCCEEEEeC--CCEEEEEEEe
Confidence 9999999994 6788887643
No 96
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.95 E-value=1.1e-08 Score=83.03 Aligned_cols=84 Identities=17% Similarity=0.228 Sum_probs=66.5
Q ss_pred EEEEEEEeCCc----------cccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCC
Q 028365 86 SLARLDLAKGG----------VIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGA 155 (210)
Q Consensus 86 s~~~v~l~pgg----------~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~ 155 (210)
+...+.+.|+. ..++|+|+. .|+.||++|++.+.+.+. +++.++..+++||++++|+|+.|+..+..+
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~-~Ei~yVleG~G~f~i~d~-~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~ 152 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHLD-EEIRYILEGSGYFDVRDK-EDKWIRISMEKGDMITLPAGIYHRFTLDEK 152 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECSS-CEEEEEEEEEEEEEEECT-TSCEEEEEEETTEEEEECTTCCEEEEECTT
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECCc-ceEEEEEeceEEEEECCC-CCeEEEEEECCCCEEEECcCCcCCcccCCC
Confidence 55667777775 258999987 899999999999998543 355556699999999999999999988767
Q ss_pred CCEEEEEEecCCCCCce
Q 028365 156 DGALGFVSFNSPNPGLQ 172 (210)
Q Consensus 156 ~~a~~~~~f~s~~pg~~ 172 (210)
.....+-.|.. .+|..
T Consensus 153 ~~~~airlF~~-~~~W~ 168 (191)
T 1vr3_A 153 NYVKAMRLFVG-EPVWT 168 (191)
T ss_dssp CCEEEEEEESS-SCCCC
T ss_pred CCEEEEEEECC-CCCcc
Confidence 67777777764 46654
No 97
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.92 E-value=3.7e-09 Score=77.25 Aligned_cols=61 Identities=16% Similarity=0.194 Sum_probs=49.9
Q ss_pred EEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCC-CeEEEEEEcCCCEEEECCCCeeEEEeCCCCCE
Q 028365 89 RLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGA 158 (210)
Q Consensus 89 ~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~-~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a 158 (210)
.....||.. ++| |+ ..|++||++|++++.+ + ++.+ .|++||+++||+|.+|.+.|.++...
T Consensus 35 ~~~~~pg~~-~~h-H~-~~E~~~Vl~G~~~~~i----~~g~~~--~l~~GD~i~ip~g~~H~~~n~~~~~~ 96 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YD-TNETCYILEGKVEVTT----EDGKKY--VIEKGDLVTFPKGLRCRWKVLEPVRK 96 (101)
T ss_dssp EEEECSEEE-EEE-CS-SCEEEEEEEEEEEEEE----TTCCEE--EEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CC-ceEEEEEEeCEEEEEE----CCCCEE--EECCCCEEEECCCCcEEEEeCCCeeE
Confidence 456777763 456 65 6999999999999998 6 7766 99999999999999999999765433
No 98
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.81 E-value=1.1e-08 Score=85.77 Aligned_cols=71 Identities=15% Similarity=0.150 Sum_probs=61.7
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
..+.+.+++++||+....|+ ..|++||++|++++.+ +++.+ .|++||.++||++..|.+.|. +++.+++
T Consensus 48 ~~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~----~~~~~--~l~~Gd~~~~p~~~~H~~~n~--~~~~~l~ 116 (246)
T 1sfn_A 48 ARFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAV----GGETR--TLREYDYVYLPAGEKHMLTAK--TDARVSV 116 (246)
T ss_dssp CSSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEEC----SSCEE--EECTTEEEEECTTCCCEEEEE--EEEEEEE
T ss_pred CcEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEE----CCEEE--EECCCCEEEECCCCCEEEEeC--CCEEEEE
Confidence 34688899999999877774 6899999999999998 78866 999999999999999999998 6777766
Q ss_pred Ee
Q 028365 163 SF 164 (210)
Q Consensus 163 ~f 164 (210)
+.
T Consensus 117 v~ 118 (246)
T 1sfn_A 117 FE 118 (246)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 99
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.78 E-value=1.9e-08 Score=79.40 Aligned_cols=73 Identities=16% Similarity=0.231 Sum_probs=61.3
Q ss_pred ceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeC--CCCCEEEE
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNS--GADGALGF 161 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~--g~~~a~~~ 161 (210)
+..+.+++++||+..+.|.|+. .|.+||++|+.++. + .++ .+++||.++.|+|..|...+. ++++++++
T Consensus 41 g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~~---e-~~~----~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~ 111 (159)
T 3ebr_A 41 GETITLLKAPAGMEMPRHHHTG-TVIVYTVQGSWRYK---E-HDW----VAHAGSVVYETASTRHTPQSAYAEGPDIITF 111 (159)
T ss_dssp TEEEEEEEECSSCBCCCEEESS-CEEEEEEESCEEET---T-SSC----CBCTTCEEEECSSEEECEEESSSSSSCEEEE
T ss_pred CeEEEEEEECCCCCcccccCCC-CEEEEEEEeEEEEe---C-CCe----EECCCeEEEECCCCcceeEeCCCCCCCEEEE
Confidence 3577889999999999999986 89999999997653 2 332 789999999999999999998 77888887
Q ss_pred EEec
Q 028365 162 VSFN 165 (210)
Q Consensus 162 ~~f~ 165 (210)
.+..
T Consensus 112 ~~~~ 115 (159)
T 3ebr_A 112 NIVA 115 (159)
T ss_dssp EEEE
T ss_pred EEec
Confidence 6443
No 100
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.77 E-value=5e-08 Score=84.90 Aligned_cols=76 Identities=20% Similarity=0.180 Sum_probs=64.7
Q ss_pred EEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcC-C---CEEEECCCCeeEEEeCCCCCEEEE
Q 028365 86 SLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKK-G---DIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 86 s~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~-G---Dv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
.....+..||..+.+|||.+..|+++|++|++.+.+.++..++.+ .+.. | +++++|+|..|.++|.|+++++++
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~ 350 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEII--EYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTI 350 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCCCE--EEEEETTBCCEEEECTTEEEEEEECSSSCEEEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCcEE--EEEecCCcceEEEeCCCceEEeEEcCCCcEEEE
Confidence 344567899999999999999999999999999988776456755 6666 7 999999999999999999999877
Q ss_pred EE
Q 028365 162 VS 163 (210)
Q Consensus 162 ~~ 163 (210)
..
T Consensus 351 ~~ 352 (369)
T 3st7_A 351 MW 352 (369)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 101
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.76 E-value=5.7e-09 Score=83.93 Aligned_cols=71 Identities=18% Similarity=0.226 Sum_probs=56.6
Q ss_pred ccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEecCCCCCce
Q 028365 98 IPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQ 172 (210)
Q Consensus 98 ~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg~~ 172 (210)
.++|+|+. .|+.||++|++.+.+. . +++.+...+++||++++|+|+.|+..+..+.....+-.|.. .+|..
T Consensus 93 ~~~H~H~~-~Ei~~Vl~G~g~~~i~-~-~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~-~~~w~ 163 (179)
T 1zrr_A 93 LNEHTHGE-DEVRFFVEGAGLFCLH-I-GDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDN-PEGWI 163 (179)
T ss_dssp HSCBEESS-CEEEEEEESCCCCCEE-C-SSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECC-GGGEE
T ss_pred ccceECCh-heEEEEEcceEEEEEE-e-CCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccC-CCCcc
Confidence 68999986 8999999999999875 2 56666568999999999999999988766656777766764 35543
No 102
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.74 E-value=1.2e-07 Score=75.38 Aligned_cols=70 Identities=16% Similarity=0.182 Sum_probs=55.1
Q ss_pred cCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCC
Q 028365 81 NGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSG 154 (210)
Q Consensus 81 ~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g 154 (210)
++.++.++. .-.|++...+|.|+ ..|++||++|++.+.+.+ +++.....|++||++++|+|+.|.-+..+
T Consensus 32 nd~~~~V~~-v~Gpn~r~d~H~h~-~dE~FyvlkG~m~i~v~d--~g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 32 QDSDFIVTV-VGGPNHRTDYHDDP-LEEFFYQLRGNAYLNLWV--DGRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp SSCSEEEEE-ECSCBCCCCEEECS-SCEEEEEEESCEEEEEEE--TTEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cCCcEEEEE-EcCCCcCccCcCCC-CceEEEEEeeEEEEEEEc--CCceeeEEECCCCEEEeCCCCCcCccccC
Confidence 334444443 34677789999885 599999999999999987 45444569999999999999999887654
No 103
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.73 E-value=1.9e-08 Score=76.09 Aligned_cols=67 Identities=18% Similarity=0.121 Sum_probs=54.0
Q ss_pred ceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCC
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADG 157 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~ 157 (210)
.+.+...+..||... .|+|.. .|++||++|++++.+ + +++.+ .|++||++++|+|..|.+.|.+...
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~~-~E~~~Vl~G~~~l~~--~-~g~~~--~l~~GD~~~ip~g~~h~~~~~~~~r 114 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTGY-IEYCHIIEGEARLVD--P-DGTVH--AVKAGDAFIMPEGYTGRWEVDRHVK 114 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTTE-EEEEEEEEEEEEEEC--T-TCCEE--EEETTCEEEECTTCCCEEEEEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCCC-cEEEEEEEEEEEEEE--C-CCeEE--EECCCCEEEECCCCeEEEEECCcee
Confidence 478888889998643 566642 899999999999986 2 46655 9999999999999999999975543
No 104
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.73 E-value=8.1e-08 Score=84.45 Aligned_cols=79 Identities=13% Similarity=0.219 Sum_probs=63.4
Q ss_pred cccCcceEEEEEEEeC---CccccceecCCCCEEEEEEeCEEEEEEEecCCC-eEEEEEEcCCCEEEECCCCeeEEEeCC
Q 028365 79 AVNGLGLSLARLDLAK---GGVIPIHTHPAASEILLVVHGCITAGFISSSAN-TVYVKTLKKGDIMIFPQGLLHFQVNSG 154 (210)
Q Consensus 79 ~l~~~gis~~~v~l~p---gg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~-~~~~~~l~~GDv~~~P~g~~H~~~N~g 154 (210)
......+++..+++.+ |+..+.|.|+. .|++||++|++++.+ ++ +.+ .|++||+++||+|.+|.+.|.+
T Consensus 243 ~~~~~~f~~~~i~~~~~~~g~~~~~h~~~~-~~~~~vleG~~~i~i----~g~~~~--~l~~Gd~~~iPag~~h~~~~~~ 315 (350)
T 1juh_A 243 QAQDTNYTLSTISMSTTPSTVTVPTWSFPG-ACAFQVQEGRVVVQI----GDYAAT--ELGSGDVAFIPGGVEFKYYSEA 315 (350)
T ss_dssp HHGGGCEEEEEEEECCCCTTSCCCCBCCSS-CEEEEEEESCEEEEE----TTSCCE--EECTTCEEEECTTCCEEEEESS
T ss_pred cCceeEEEEEEEeeccccCCCCCCcccCCC-cEEEEEEeeEEEEEE----CCeEEE--EeCCCCEEEECCCCCEEEEecC
Confidence 3344447888888888 34688888975 999999999999999 77 755 9999999999999999999976
Q ss_pred CCCEEEEEEec
Q 028365 155 ADGALGFVSFN 165 (210)
Q Consensus 155 ~~~a~~~~~f~ 165 (210)
+. +.++...+
T Consensus 316 ~~-~~~l~~~~ 325 (350)
T 1juh_A 316 YF-SKVLFVSS 325 (350)
T ss_dssp SS-EEEEEEEE
T ss_pred Ce-EEEEEEec
Confidence 54 66665444
No 105
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.73 E-value=4.1e-08 Score=79.72 Aligned_cols=70 Identities=24% Similarity=0.306 Sum_probs=59.7
Q ss_pred eEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEe
Q 028365 85 LSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSF 164 (210)
Q Consensus 85 is~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f 164 (210)
..+..++++||+.++.|+|+. .|+.||++|++. + +.. .+.+||.+++|.|..|...+.+.+.++++.+.
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~g-~E~~~VL~G~f~----d--e~~----~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~~ 193 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHRG-LELTLVLQGAFR----D--ETD----RFGAGDIEIADQELEHTPVAERGLDCICLAAT 193 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCSS-CEEEEEEESEEE----C--SSS----EEETTCEEEECSSCCCCCEECSSSCEEEEEEE
T ss_pred cEEEEEEECCCCCCCCcCCCC-eEEEEEEEEEEE----C--CcE----EECCCeEEEeCcCCccCCEeCCCCCEEEEEEe
Confidence 466789999999999999975 899999999954 3 222 78999999999999999998778889988776
Q ss_pred c
Q 028365 165 N 165 (210)
Q Consensus 165 ~ 165 (210)
+
T Consensus 194 d 194 (195)
T 2q1z_B 194 D 194 (195)
T ss_dssp C
T ss_pred c
Confidence 4
No 106
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.72 E-value=1.1e-08 Score=79.37 Aligned_cols=90 Identities=13% Similarity=0.003 Sum_probs=64.0
Q ss_pred CCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECC
Q 028365 65 INAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQ 144 (210)
Q Consensus 65 ~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~ 144 (210)
.|...+.+.... ..+-.+.+++++||+..+.|+|+. .|.+||++|+++... ++......+++||.+++|+
T Consensus 29 ~Gv~~~~L~~~~-----~~g~~~~~~~~~pG~~~p~H~H~~-~ee~~VL~G~~~~~~----g~~~~~~~~~~Gd~~~~p~ 98 (145)
T 2o1q_A 29 GGIRWKLLHVSP-----EMGSWTAIFDCPAGSSFAAHVHVG-PGEYFLTKGKMDVRG----GKAAGGDTAIAPGYGYESA 98 (145)
T ss_dssp SCCEEEEEEEET-----TTTEEEEEEEECTTEEECCEEESS-CEEEEEEEEEEEETT----CGGGTSEEEESSEEEEECT
T ss_pred CCcEEEEeeECC-----CcccEEEEEEECCCCCCCccCCCC-CEEEEEEEeEEEEcC----CCEecceEeCCCEEEEECc
Confidence 455555553221 122357789999999999999986 777999999998543 3332014899999999999
Q ss_pred CCeeE-EEeCCCCCEEEEEEecC
Q 028365 145 GLLHF-QVNSGADGALGFVSFNS 166 (210)
Q Consensus 145 g~~H~-~~N~g~~~a~~~~~f~s 166 (210)
|..|. ..+ .+.++++.++..
T Consensus 99 g~~H~p~~~--~e~~~~l~~~~g 119 (145)
T 2o1q_A 99 NARHDKTEF--PVASEFYMSFLG 119 (145)
T ss_dssp TCEESCCEE--EEEEEEEEEEES
T ss_pred CCccCCeEC--CCCeEEEEEECC
Confidence 99998 433 445677766664
No 107
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.69 E-value=4.3e-08 Score=77.78 Aligned_cols=73 Identities=19% Similarity=0.269 Sum_probs=57.9
Q ss_pred ceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCC--CCCEEEE
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSG--ADGALGF 161 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g--~~~a~~~ 161 (210)
+..+.+++++||+.+++|+|+. .|.+||++|++... ++..+ .+++||.++.|+|..|...+.. +++++++
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~f~~~-----~~~~~--~~~aGd~~~~P~g~~H~~~a~~~~~~gci~l 113 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHTG-TVHMYTISGCWYYT-----EYPGQ--KQTAGCYLYEPGGSIHQFNTPRDNEGQTEVI 113 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEESS-CEEEEEEESEEEET-----TCTTS--CEETTEEEEECTTCEECEECCTTCSSCEEEE
T ss_pred CcEEEEEEECCCCcCCcccCCC-CEEEEEEEEEEEEC-----CCceE--EECCCeEEEeCCCCceeeEeCCCCCCCcEEE
Confidence 4567889999999999999986 89999999998753 22123 7899999999999999998854 3377555
Q ss_pred EEe
Q 028365 162 VSF 164 (210)
Q Consensus 162 ~~f 164 (210)
.+.
T Consensus 114 ~v~ 116 (165)
T 3cjx_A 114 FML 116 (165)
T ss_dssp EEE
T ss_pred EEE
Confidence 533
No 108
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.64 E-value=1.8e-07 Score=74.82 Aligned_cols=79 Identities=20% Similarity=0.253 Sum_probs=61.5
Q ss_pred eEEEEEEEeCCccccceecCC------CCEEEEEEeCEEEEEEEecCCCeE------------------EEEEEcCCCEE
Q 028365 85 LSLARLDLAKGGVIPIHTHPA------ASEILLVVHGCITAGFISSSANTV------------------YVKTLKKGDIM 140 (210)
Q Consensus 85 is~~~v~l~pgg~~~pH~Hp~------a~Ei~yVl~G~~~v~vv~~~~~~~------------------~~~~l~~GDv~ 140 (210)
...-++.+.||...|.|.|+. -.|-++|+.|.+++.+ + +.+. ....|+|||.+
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~-~--g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesv 129 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYV-E--GEKTPLPKVLPPQEDREHYTVWHEIELEPGGQY 129 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEE-S--SSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEE
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEE-C--CccccCcceeccCCceeeecCCcEEEECCCCEE
Confidence 456678899999999999998 8999999999998887 2 2211 12499999999
Q ss_pred EECCCCeeEEEeCCCCCEEEEEEecCCC
Q 028365 141 IFPQGLLHFQVNSGADGALGFVSFNSPN 168 (210)
Q Consensus 141 ~~P~g~~H~~~N~g~~~a~~~~~f~s~~ 168 (210)
.+|+|+.|++++ +.+. .++.-+++.+
T Consensus 130 tIppg~~H~f~a-geeg-vli~EvSt~~ 155 (175)
T 2y0o_A 130 TIPPNTKHWFQA-GEEG-AVVTEMSSTS 155 (175)
T ss_dssp EECTTCCEEEEE-EEEE-EEEEEEEECC
T ss_pred EECCCCcEEEEe-CCCC-EEEEEEeCCC
Confidence 999999999999 3343 5555555443
No 109
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=98.64 E-value=2e-07 Score=67.15 Aligned_cols=76 Identities=17% Similarity=0.110 Sum_probs=59.4
Q ss_pred eEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEe-cCCCCCceech---HhHHhhcCCHHHHHHhcCCCHHHHHHHh
Q 028365 128 TVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSF-NSPNPGLQITD---FALFANNLSSQLVEQTTFLDDATVKRLK 203 (210)
Q Consensus 128 ~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f-~s~~pg~~~i~---~~~f~s~~p~~vla~~f~~~~~~v~~l~ 203 (210)
+.+...|++||+++||+|.+-.+.+.. +..+++.- ++++.....++ .+++. .+|.++++.+|+++.+++++|+
T Consensus 4 ~~~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~-~l~~evla~aF~~s~ee~~~l~ 80 (93)
T 1dgw_Y 4 RRYAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIR-QIPRQVSDLTFPGSGEEVEELL 80 (93)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTT-TSCHHHHHHHSSSCTHHHHHHT
T ss_pred chhhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHH-hCCHHHHHHHcCCCHHHHHHHH
Confidence 456779999999999999999998863 47666542 44466666553 34554 6999999999999999999999
Q ss_pred hhh
Q 028365 204 AIL 206 (210)
Q Consensus 204 ~~~ 206 (210)
.+.
T Consensus 81 ~~q 83 (93)
T 1dgw_Y 81 ENQ 83 (93)
T ss_dssp TSC
T ss_pred hcC
Confidence 764
No 110
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.60 E-value=6.8e-07 Score=79.19 Aligned_cols=87 Identities=15% Similarity=0.069 Sum_probs=70.7
Q ss_pred Cce-EEEeeccc-cCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEEC
Q 028365 66 NAA-VTPAFVAQ-FPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFP 143 (210)
Q Consensus 66 gg~-~~~~~~~~-~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P 143 (210)
|.. +..++..+ =+.+.+ |.+....++||...++|-|. +.++++|++|++.+.+ +++.+ ..++||+|++|
T Consensus 260 g~~~~~y~NP~tg~~~~pt--i~~~~~~L~pG~~t~~hRht-~s~Vy~V~eG~G~~~I----~~~~~--~w~~gD~fvvP 330 (368)
T 3nw4_A 260 GHAAIRYVNPTTGGDVMPT--LRCEFHRLRAGTETATRNEV-GSTVFQVFEGAGAVVM----NGETT--KLEKGDMFVVP 330 (368)
T ss_dssp TEEEEECBCTTTSSBSSSS--CEEEEEEECTTCBCCCEEES-SCEEEEEEESCEEEEE----TTEEE--EECTTCEEEEC
T ss_pred ceEEEEEeCCCCCCCcchh--HHhheEEECCCCccCCeecc-ccEEEEEEeCcEEEEE----CCEEE--EecCCCEEEEC
Confidence 555 56666442 244555 56667788999999999996 5799999999999999 88866 99999999999
Q ss_pred CCCeeEEEeCCCCCEEEEEE
Q 028365 144 QGLLHFQVNSGADGALGFVS 163 (210)
Q Consensus 144 ~g~~H~~~N~g~~~a~~~~~ 163 (210)
++..|...|. +++.+|.+
T Consensus 331 ~w~~h~~~n~--~~a~Lf~~ 348 (368)
T 3nw4_A 331 SWVPWSLQAE--TQFDLFRF 348 (368)
T ss_dssp TTCCEEEEES--SSEEEEEE
T ss_pred CCCcEEEEeC--CCEEEEEE
Confidence 9999999995 67877754
No 111
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.60 E-value=1.1e-06 Score=70.14 Aligned_cols=86 Identities=15% Similarity=0.299 Sum_probs=71.4
Q ss_pred ceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCe---EEEEEEcCCCEEEECCCCeeEEEeCCCCCEEE
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANT---VYVKTLKKGDIMIFPQGLLHFQVNSGADGALG 160 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~---~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~ 160 (210)
.+++..+...||...++|-|..+..+++|++|+++..+....+++ .....+++||++++|++.+|.+.|.++++++-
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVS 147 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVS 147 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEE
Confidence 357888899999999999998878999999999998765431331 12458999999999999999999999999999
Q ss_pred EEEecCCCC
Q 028365 161 FVSFNSPNP 169 (210)
Q Consensus 161 ~~~f~s~~p 169 (210)
+-++.....
T Consensus 148 lHvY~pp~~ 156 (171)
T 3eqe_A 148 LHVYSPPLE 156 (171)
T ss_dssp EEEEESCCC
T ss_pred EEEeCCCcc
Confidence 988876543
No 112
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.53 E-value=3.1e-07 Score=70.56 Aligned_cols=66 Identities=11% Similarity=0.215 Sum_probs=50.9
Q ss_pred CCccccceecCCCCEEEEEEeCEEEEEEEecCCC--eEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 94 KGGVIPIHTHPAASEILLVVHGCITAGFISSSAN--TVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 94 pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~--~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
++++..+|.|++.+|+++|++|++++.+.+..++ +.....|++|++++||+|+.|...... ++.++
T Consensus 38 ~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~--e~~vL 105 (140)
T 3d0j_A 38 IEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQK--DTKMM 105 (140)
T ss_dssp TTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECT--TCEEE
T ss_pred cccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCC--ceEEE
Confidence 3567899999999999999999999998642111 122459999999999999999887643 34444
No 113
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.50 E-value=1.3e-06 Score=66.89 Aligned_cols=57 Identities=16% Similarity=0.145 Sum_probs=48.4
Q ss_pred cceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCC-CCEEEEE
Q 028365 99 PIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFV 162 (210)
Q Consensus 99 ~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~-~~a~~~~ 162 (210)
.||.|+ ..|++||++|++++.+ +++.+ .+++||++++|+|.+|...+.++ ++...++
T Consensus 32 ~p~~h~-~~~i~~v~~G~~~~~i----~~~~~--~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~ 89 (164)
T 2arc_A 32 RPLGMK-GYILNLTIRGQGVVKN----QGREF--VCRPGDILLFPPGEIHHYGRHPEAREWYHQW 89 (164)
T ss_dssp ETTCCS-SEEEEEEEEECEEEEE----TTEEE--EECTTCEEEECTTCCEEEEECTTSSEEEEEE
T ss_pred cccCCC-ceEEEEEEEeEEEEEE----CCEEE--EecCCeEEEEcCCCCEEEEeCCCCCcEEEEE
Confidence 589996 4899999999999998 88867 99999999999999999888663 5555544
No 114
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.48 E-value=1.5e-06 Score=69.06 Aligned_cols=59 Identities=15% Similarity=0.232 Sum_probs=48.9
Q ss_pred EeCCccccceecCCCCEEEEEEeCEEEEEEEecCCC----eEEEEEEcCCCEEEECCCCeeEEEeC
Q 028365 92 LAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAN----TVYVKTLKKGDIMIFPQGLLHFQVNS 153 (210)
Q Consensus 92 l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~----~~~~~~l~~GDv~~~P~g~~H~~~N~ 153 (210)
-.|+...-+|.|+ ..|++|+++|++.+.+.+. + +.....|++||++++|+|+.|.-+..
T Consensus 41 gGPn~r~D~H~~~-~eE~Fy~lkG~m~l~v~d~--g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 41 GGPNERTDYHINP-TPEWFYQKKGSMLLKVVDE--TDAEPKFIDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp CSSBCCSCEEECS-SCEEEEEEESCEEEEEEEC--SSSSCEEEEEEECTTEEEEECTTCCEEEEEC
T ss_pred cCCCcCCcCcCCC-CceEEEEEeCEEEEEEEcC--CCcccceeeEEECCCCEEEcCCCCCcCCccc
Confidence 3555778999665 5999999999999999873 4 34456999999999999999988664
No 115
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.36 E-value=2.7e-06 Score=70.46 Aligned_cols=70 Identities=21% Similarity=0.301 Sum_probs=57.9
Q ss_pred ceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEE
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVS 163 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~ 163 (210)
+.....++++||+.+++|+|+. .|.+||++|++. + ++. .+.+||.++.|+|..|.... ++.+++++.
T Consensus 42 g~~~~lvr~~pG~~~p~H~H~g-~Ee~~VL~G~f~----d--~~~----~~~~Gd~~~~P~g~~H~p~a--~~gc~~~vk 108 (223)
T 3o14_A 42 ARATSIVRYAPGSRFSAHTHDG-GEEFIVLDGVFQ----D--EHG----DYPAGTYVRNPPTTSHVPGS--AEGCTIFVK 108 (223)
T ss_dssp CEEEEEEEECTTEECCCEECTT-CEEEEEEEEEEE----E--TTE----EEETTEEEEECTTCEECCEE--SSCEEEEEE
T ss_pred ccEEEEEEECCCCCcccccCCC-CEEEEEEEeEEE----E--CCe----EECCCeEEEeCCCCccccEe--CCCCEEEEE
Confidence 3456789999999999999975 899999999964 3 333 88999999999999998776 567888877
Q ss_pred ecC
Q 028365 164 FNS 166 (210)
Q Consensus 164 f~s 166 (210)
...
T Consensus 109 ~~~ 111 (223)
T 3o14_A 109 LWQ 111 (223)
T ss_dssp ESC
T ss_pred ecC
Confidence 653
No 116
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.35 E-value=3.6e-06 Score=71.55 Aligned_cols=59 Identities=12% Similarity=0.216 Sum_probs=50.3
Q ss_pred eCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCC
Q 028365 93 AKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSG 154 (210)
Q Consensus 93 ~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g 154 (210)
.|+...-+| |....|++|+++|...+.+.+ +++.....|++||++++|+|+.|.-+...
T Consensus 39 GpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d--~g~~~~V~i~eGemfllP~gv~HsP~r~~ 97 (286)
T 2qnk_A 39 GPNTRKDYH-IEEGEEVFYQLEGDMVLRVLE--QGKHRDVVIRQGEIFLLPARVPHSPQRFA 97 (286)
T ss_dssp SCBCCCCEE-ECSSCEEEEEEESCEEEEEEE--TTEEEEEEECTTEEEEECTTCCEEEEECT
T ss_pred CCCcCccCc-CCCCCeEEEEEeCeEEEEEEe--CCceeeEEECCCeEEEeCCCCCcCCcccC
Confidence 444558899 989999999999999999987 46555669999999999999999987743
No 117
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.33 E-value=4.6e-07 Score=70.94 Aligned_cols=78 Identities=13% Similarity=0.011 Sum_probs=59.9
Q ss_pred cCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEEC
Q 028365 64 IINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFP 143 (210)
Q Consensus 64 ~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P 143 (210)
..|..++.+... | ..|-...+++++||+.+++|+|+. .|.+|||+|+..... ++......+++|+.++.|
T Consensus 30 ~~Gv~~k~L~~~--~---e~g~~t~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~~~----Gd~~~~~~~~aGsYv~eP 99 (153)
T 3bal_A 30 DGGITWQLLHSS--P---ETSSWTAIFNCPAGSSFASHIHAG-PGEYFLTKGKMEVRG----GEQEGGSTAYAPSYGFES 99 (153)
T ss_dssp ESCCEEEEEEEE--T---TTTEEEEEEEECTTEEECCEEESS-CEEEEEEESEEEETT----CGGGTSEEEESSEEEEEC
T ss_pred CCCeEEEEEEEC--C---ccceEEEEEEeCCCCCccCccCCC-CEEEEEEEEEEEecC----ccccCccccCCCeEEEcC
Confidence 457777777332 2 245678889999999999999986 888999999987653 322113488999999999
Q ss_pred CCCeeEEE
Q 028365 144 QGLLHFQV 151 (210)
Q Consensus 144 ~g~~H~~~ 151 (210)
+|..|...
T Consensus 100 pGs~H~p~ 107 (153)
T 3bal_A 100 SGALHGKT 107 (153)
T ss_dssp TTCEESCC
T ss_pred CCCcccce
Confidence 99999743
No 118
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.28 E-value=9.9e-06 Score=66.36 Aligned_cols=81 Identities=15% Similarity=0.216 Sum_probs=66.6
Q ss_pred eEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEec-CCCeE----EEEEEcCCCEEEECC--CCeeEEEeC-CCC
Q 028365 85 LSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS-SANTV----YVKTLKKGDIMIFPQ--GLLHFQVNS-GAD 156 (210)
Q Consensus 85 is~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~-~~~~~----~~~~l~~GDv~~~P~--g~~H~~~N~-g~~ 156 (210)
+.+..+...||...++|-|.. ..+++|++|+++..+... ++++. ....+++||+++++. |.+|.+.|. +++
T Consensus 79 ~~v~~l~w~PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~~ 157 (208)
T 2gm6_A 79 FSIVSFVWGPGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDDR 157 (208)
T ss_dssp CEEEEEEECTTCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSS
T ss_pred EEEEEEEeCCCcccCcccCCc-ceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCCC
Confidence 678888999999999999986 899999999998876541 12221 145899999999999 999999999 688
Q ss_pred CEEEEEEecC
Q 028365 157 GALGFVSFNS 166 (210)
Q Consensus 157 ~a~~~~~f~s 166 (210)
+++.+-+|..
T Consensus 158 ~avsLHvY~~ 167 (208)
T 2gm6_A 158 VSISIHVYGA 167 (208)
T ss_dssp CEEEEEEESS
T ss_pred cEEEEEEEcC
Confidence 8998877764
No 119
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=98.18 E-value=5.4e-05 Score=58.38 Aligned_cols=96 Identities=13% Similarity=0.080 Sum_probs=68.4
Q ss_pred ccCCceEEEeec-cccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCE-E
Q 028365 63 SIINAAVTPAFV-AQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDI-M 140 (210)
Q Consensus 63 ~~~gg~~~~~~~-~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv-~ 140 (210)
....|+++.+.. +.+|- .-. -.......+||..+.+|.|.+..|++++++|++.+.+-+ +....+..|..... +
T Consensus 14 ~D~RG~L~~~e~~~~ipf-~ik-Rvy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldD--g~~~~~~~L~~~~~gL 89 (141)
T 2pa7_A 14 IDSRGSLVAIEENKNIPF-SIK-RVYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDD--GNIIQEITLDSPAVGL 89 (141)
T ss_dssp EETTEEEEEEETTTTSSS-CCC-EEEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEEC--SSCEEEEEECCTTEEE
T ss_pred ecCCCcEEEEeccCCCCC-Ccc-EEEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEEC--CcEEEEEEECCCCcEE
Confidence 345788888876 44443 211 123334456888999999999999999999999999844 22233446666555 9
Q ss_pred EECCCCeeEEEeCCCCCEEEEEE
Q 028365 141 IFPQGLLHFQVNSGADGALGFVS 163 (210)
Q Consensus 141 ~~P~g~~H~~~N~g~~~a~~~~~ 163 (210)
.||+|+.|.+.+.+++ ++++..
T Consensus 90 ~IppgvWh~~~~~s~~-avllvl 111 (141)
T 2pa7_A 90 YVGPAVWHEMHDFSSD-CVMMVL 111 (141)
T ss_dssp EECTTCEEEEECCCTT-CEEEEE
T ss_pred EeCCCEEEEEEEcCCC-eEEEEE
Confidence 9999999999998775 665543
No 120
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=98.11 E-value=9.9e-05 Score=58.81 Aligned_cols=99 Identities=15% Similarity=0.149 Sum_probs=69.5
Q ss_pred cCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCC-----CeEEEEEEc---
Q 028365 64 IINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA-----NTVYVKTLK--- 135 (210)
Q Consensus 64 ~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~-----~~~~~~~l~--- 135 (210)
...|.+.+.......++.... ........+|..+.+|+|....++++|++|++...++|-.. ++.....|.
T Consensus 33 D~RG~f~e~~~~~~~~~~~f~-Q~n~s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~ 111 (174)
T 3ejk_A 33 AEGGPVLHMLRLDSPQFSQFG-EIYFSEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPD 111 (174)
T ss_dssp CTTSCEECCCCTTCTTCCCCC-EEEEEEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTT
T ss_pred cCCcCEEEEEecCccCCCCee-EEEEEECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCcc
Confidence 345666665544332221111 11222347788999999988899999999999999987422 344566887
Q ss_pred CCCEEEECCCCeeEEEeCCCCCEEEEEE
Q 028365 136 KGDIMIFPQGLLHFQVNSGADGALGFVS 163 (210)
Q Consensus 136 ~GDv~~~P~g~~H~~~N~g~~~a~~~~~ 163 (210)
....++||+|..|.+.+.++++++++..
T Consensus 112 n~~~L~IP~G~aHgf~~lsd~~av~ly~ 139 (174)
T 3ejk_A 112 NYRLLRIPPQVWYGFAATGDTPALVANC 139 (174)
T ss_dssp BCEEEEECTTCEEEEEECTTSCEEEEEE
T ss_pred CceEEEeCCCcEEEEEEccCCCEEEEEE
Confidence 5678999999999999998877766543
No 121
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.06 E-value=9.4e-05 Score=60.16 Aligned_cols=84 Identities=18% Similarity=0.220 Sum_probs=67.4
Q ss_pred eEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecC-CC-----eEEEEEEcCCCEEEE-CCCCeeEEEeCC-CC
Q 028365 85 LSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS-AN-----TVYVKTLKKGDIMIF-PQGLLHFQVNSG-AD 156 (210)
Q Consensus 85 is~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~-~~-----~~~~~~l~~GDv~~~-P~g~~H~~~N~g-~~ 156 (210)
.++..+...||...++|=|..+..+++|++|+++....+-. ++ ..-...+++||+.++ |++.+|.+.|.+ ++
T Consensus 70 ~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~~ 149 (200)
T 3eln_A 70 FNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTE 149 (200)
T ss_dssp CEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSSC
T ss_pred eEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCCC
Confidence 57777889999999999998789999999999998865421 11 123569999999999 888899999998 67
Q ss_pred CEEEEEEecCCC
Q 028365 157 GALGFVSFNSPN 168 (210)
Q Consensus 157 ~a~~~~~f~s~~ 168 (210)
+++-|=+|....
T Consensus 150 ~avSlHvY~pp~ 161 (200)
T 3eln_A 150 PAVSLHLYSPPF 161 (200)
T ss_dssp CEEEEEEEESCC
T ss_pred CEEEEEeCCCCc
Confidence 888776666443
No 122
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=98.04 E-value=5.2e-05 Score=63.32 Aligned_cols=73 Identities=15% Similarity=0.203 Sum_probs=55.3
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
-++++..+.+ .|..... .+| .+|++||++|++++.. +++.+ .+++||+++||+|..|.+...+.- ..+++
T Consensus 45 ~~~~~G~~~~-~g~~~v~-~~p-~dE~~~VleG~~~lt~----~g~~~--~~~~Gd~~~ip~G~~~~w~~~~~~-~~~y~ 114 (238)
T 3myx_A 45 QGIAAGIVEF-GTALSVE-AYP-YTEMLVMHRGSVTLTS----GTDSV--TLSTGESAVIGRGTQVRIDAQPES-LWAFC 114 (238)
T ss_dssp TSEEEEEEEE-CSEEEES-SCS-SEEEEEEEESEEEEEE----TTEEE--EEETTCEEEECTTCCEEEEECTTE-EEEEE
T ss_pred CCeEEEEEEe-ccccccc-cCC-CcEEEEEEEeEEEEEC----CCeEE--EEcCCCEEEECCCCEEEEEecCCe-EEEEE
Confidence 3578888888 5554332 233 3799999999999987 67855 999999999999999998875443 44566
Q ss_pred Eec
Q 028365 163 SFN 165 (210)
Q Consensus 163 ~f~ 165 (210)
.+.
T Consensus 115 ~~~ 117 (238)
T 3myx_A 115 AST 117 (238)
T ss_dssp EEC
T ss_pred ecc
Confidence 677
No 123
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.80 E-value=4.8e-05 Score=63.42 Aligned_cols=60 Identities=7% Similarity=0.083 Sum_probs=47.6
Q ss_pred EEEEEEEeCCc--cccceecCCCCEEEEEEeCEEEEEEEecCCCe---EEEEEEcCCCEEEECCCCeeEEEeC
Q 028365 86 SLARLDLAKGG--VIPIHTHPAASEILLVVHGCITAGFISSSANT---VYVKTLKKGDIMIFPQGLLHFQVNS 153 (210)
Q Consensus 86 s~~~v~l~pgg--~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~---~~~~~l~~GDv~~~P~g~~H~~~N~ 153 (210)
-+....+.... ..++|||. .-|++||++|++. .+ +++ .+ .+++||++++|+|.+|.+...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~G~~~-~i----~~~~~~~~--~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 8 QTNVYRMSKFDTYIFNNLYIN-DYKMFWIDSGIAK-LI----DKNCLVSY--EINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEEEEEECTTCEEEEEEEECS-SCEEEEESSSCEE-EE----ETTTTEEE--EECTTEEEEECTTCEEEEEEE
T ss_pred hhhhhhhhcccchhccHhhhc-ceEEEEEecCceE-EE----CCccceeE--EEcCCCEEEEcCCCceeeccc
Confidence 33444455544 47899995 5999999999999 76 455 77 999999999999999988765
No 124
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.73 E-value=0.00013 Score=54.42 Aligned_cols=62 Identities=15% Similarity=0.037 Sum_probs=46.5
Q ss_pred eEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeC
Q 028365 85 LSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNS 153 (210)
Q Consensus 85 is~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~ 153 (210)
..+..-...||... .+.+ ...|++|||+|++++.. . +++.. .+++||+++||+|....+.-.
T Consensus 42 ~~~GvWe~tPG~~~-~~~~-~~~E~~~iLeG~~~lt~--d-dG~~~--~l~aGD~~~~P~G~~gtWev~ 103 (116)
T 3es4_A 42 TIVAVWMAEPGIYN-YAGR-DLEETFVVVEGEALYSQ--A-DADPV--KIGPGSIVSIAKGVPSRLEIL 103 (116)
T ss_dssp CEEEEEEECSEEEE-ECCC-SEEEEEEEEECCEEEEE--T-TCCCE--EECTTEEEEECTTCCEEEEEC
T ss_pred EEEEEEecCCceeE-CeeC-CCcEEEEEEEeEEEEEe--C-CCeEE--EECCCCEEEECCCCeEEEEEe
Confidence 45566788888643 3334 22499999999999886 2 46644 999999999999999877653
No 125
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.67 E-value=0.0015 Score=51.65 Aligned_cols=132 Identities=17% Similarity=0.177 Sum_probs=85.3
Q ss_pred ccCCceEEEeeccccC-cccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCE-EEEEEEecCCCeEEEEE----EcC
Q 028365 63 SIINAAVTPAFVAQFP-AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGC-ITAGFISSSANTVYVKT----LKK 136 (210)
Q Consensus 63 ~~~gg~~~~~~~~~~P-~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~-~~v~vv~~~~~~~~~~~----l~~ 136 (210)
.+.||+.++...+.-+ .-.....+....-+.+|....+|.. +++|+.|...|. +++.++++ +++..+.. +.+
T Consensus 26 HPEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv-~sdEiW~~~~G~pL~l~l~~~-dg~~~~~~LG~dv~~ 103 (170)
T 1yud_A 26 HVEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRL-TADEMWYFHAGQSLTIYMISP-EGELTTAQLGLDLAA 103 (170)
T ss_dssp CTTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEEC-SSCEEEEEEEESCEEEEEECT-TSCEEEEEESSCTTT
T ss_pred CCCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEc-CCCEEEEEEcCCCEEEEEEcC-CCCEEEEEeCCCccc
Confidence 5789999988876411 1112223555567889998888888 589999999998 58888887 56544333 677
Q ss_pred CCE--EEECCCCeeEEEeCCCCCEEEEEEecCCCCCceechHhHHhhcCCHHHHHHhcCCCHHHHHHHh
Q 028365 137 GDI--MIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLK 203 (210)
Q Consensus 137 GDv--~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg~~~i~~~~f~s~~p~~vla~~f~~~~~~v~~l~ 203 (210)
|+. ++||+|..+...+.+.+. .++...- .||+..-. |. ..+.+-|.+.|---++.|++|-
T Consensus 104 Ge~pQ~vVP~G~wqaa~~~~g~~-~LV~C~V--aPGF~f~d---fe-l~~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 104 GERPQFLVPKGCIFGSAMNQDGF-SLVGCMV--SPGFTFDD---FE-LFSQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp TEESCEEECTTCEEEEEESSSSE-EEEEEEE--SSCCCGGG---CC-BCBHHHHHHSCCTTHHHHTTSC
T ss_pred CceeEEEECCCCEEEEEECCCCc-EEEEEEE--CCCccCCc---eE-EcCHHHHHhHCchhHHHHHHhh
Confidence 999 999999999999873243 3333322 34543211 11 1345555555665566666553
No 126
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.61 E-value=0.00043 Score=57.74 Aligned_cols=63 Identities=16% Similarity=0.214 Sum_probs=49.8
Q ss_pred ceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeC
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNS 153 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~ 153 (210)
.++.......||.....+++ ..|++||++|++++.. . +++.+ ++++||+++||+|..-.+.-.
T Consensus 166 ~~~~GiW~~tpG~~~~~~~~--~~E~~~ILeG~v~lt~--~-~G~~~--~~~aGD~~~~P~G~~~tWev~ 228 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRPHK--IHELMNLIEGRVVLSL--E-NGSSL--TVNTGDTVFVAQGAPCKWTST 228 (238)
T ss_dssp SCEEEEEEECCEEBCCEECS--SCEEEEEEECCEEEEE--T-TSCEE--EECTTCEEEECTTCEEEEEES
T ss_pred CEEEeEEEeCCCEEECCcCC--CCEEEEEEEeEEEEEe--C-CCCEE--EECCCCEEEECCCCEEEEEEC
Confidence 46888888899885554433 4799999999998875 2 56745 999999999999998777654
No 127
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.53 E-value=0.0012 Score=54.06 Aligned_cols=81 Identities=12% Similarity=0.212 Sum_probs=64.4
Q ss_pred eEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEec-CCCeEE----EEEEcCCCEEEECCC--CeeEEEeCC-CC
Q 028365 85 LSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS-SANTVY----VKTLKKGDIMIFPQG--LLHFQVNSG-AD 156 (210)
Q Consensus 85 is~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~-~~~~~~----~~~l~~GDv~~~P~g--~~H~~~N~g-~~ 156 (210)
+++..+...||...++|=|. +.-++.|++|+++..+..- .+++.. ...+.+||+.+++++ .+|.+.|.+ ++
T Consensus 73 f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d~ 151 (211)
T 3uss_A 73 FSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDR 151 (211)
T ss_dssp CEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSS
T ss_pred EEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCCC
Confidence 57788889999999999998 8999999999998776432 123211 258999999999987 899999984 77
Q ss_pred CEEEEEEecC
Q 028365 157 GALGFVSFNS 166 (210)
Q Consensus 157 ~a~~~~~f~s 166 (210)
+++-|=+|..
T Consensus 152 ~avSLHvYg~ 161 (211)
T 3uss_A 152 TSISIHVYGA 161 (211)
T ss_dssp CEEEEEEESS
T ss_pred CEEEEEEcCC
Confidence 8877766653
No 128
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=97.26 E-value=0.0056 Score=49.05 Aligned_cols=68 Identities=13% Similarity=0.156 Sum_probs=53.9
Q ss_pred eCCccccceec--CCCCEEEEEEeCEEEEEEEecCC-----CeEEEEEEcC--CCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 93 AKGGVIPIHTH--PAASEILLVVHGCITAGFISSSA-----NTVYVKTLKK--GDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 93 ~pgg~~~pH~H--p~a~Ei~yVl~G~~~v~vv~~~~-----~~~~~~~l~~--GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
.+|.++.+|+| ..-.++++|++|++..-++|-.. ++.....|.+ +..++||+|..|.+.+.+++ ++++
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~ 132 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVN 132 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEE
Confidence 47889999999 66799999999998766666421 3566667776 58899999999999999877 4443
No 129
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=97.21 E-value=0.0053 Score=49.13 Aligned_cols=68 Identities=18% Similarity=0.111 Sum_probs=53.6
Q ss_pred eCCccccceec--CCCCEEEEEEeCEEEEEEEecCC-----CeEEEEEEcC--CCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 93 AKGGVIPIHTH--PAASEILLVVHGCITAGFISSSA-----NTVYVKTLKK--GDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 93 ~pgg~~~pH~H--p~a~Ei~yVl~G~~~v~vv~~~~-----~~~~~~~l~~--GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
.+|.++.+|+| .....+++|++|++..-++|-.. ++.....|.+ +..++||+|..|.+.+.+++ ++++
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~ 133 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFL 133 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEE
Confidence 47889999999 66789999999998766666421 4556667776 58899999999999999877 4443
No 130
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=97.15 E-value=0.0038 Score=50.53 Aligned_cols=66 Identities=12% Similarity=0.158 Sum_probs=54.4
Q ss_pred eCCccccceecCCCCEEEEEEe-CEEEEEEEecCC-----CeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 93 AKGGVIPIHTHPAASEILLVVH-GCITAGFISSSA-----NTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 93 ~pgg~~~pH~Hp~a~Ei~yVl~-G~~~v~vv~~~~-----~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
.+|.++.+|.|+ -..+++|++ |++..-++|- . ++.....|..+..++||+|..|...+.+++ +.++
T Consensus 68 ~~GvlRGlH~h~-q~Klv~~~~~G~v~dV~VDl-R~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~ 139 (197)
T 1nxm_A 68 RKNVLRGLHAEP-WDKYISVADGGKVLGTWVDL-REGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYS 139 (197)
T ss_dssp ETTBEEEEEECS-SCEEEEECSSCCEEEEEEEC-BSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEE
T ss_pred CCCCcceeeecc-cceEEEEcCCCEEEEEEEEC-CCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEE
Confidence 678899999995 589999999 9987666774 2 566677999999999999999999998765 4443
No 131
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=97.13 E-value=0.013 Score=47.39 Aligned_cols=98 Identities=15% Similarity=0.137 Sum_probs=64.0
Q ss_pred ccCCceEEEeecc-ccC--cccCcceEEEEEEEeCCccccceecCC---CCEEEEEEeCEEEEEEEecC-----CCeEEE
Q 028365 63 SIINAAVTPAFVA-QFP--AVNGLGLSLARLDLAKGGVIPIHTHPA---ASEILLVVHGCITAGFISSS-----ANTVYV 131 (210)
Q Consensus 63 ~~~gg~~~~~~~~-~~P--~l~~~gis~~~v~l~pgg~~~pH~Hp~---a~Ei~yVl~G~~~v~vv~~~-----~~~~~~ 131 (210)
....|.+.+.... .|- ++... .......-.+|.++.+|+|.. ..++++|++|++..-++|-. -++...
T Consensus 41 ~D~RG~f~e~~~~~~f~~~gi~~f-~Q~n~S~s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~ 119 (196)
T 1wlt_A 41 PDKRGFFLEVFKSEDFTKMRIPNV-IQTNMSFSRKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVK 119 (196)
T ss_dssp EETTEEEEEEEEHHHHHHTTCCCE-EEEEEEEECTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEE
T ss_pred ecCCcCEEEEEecchhhhcCCCCE-EEEEEEECCCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEE
Confidence 3456777776543 221 11111 112222235788899999964 57999999999976666632 144566
Q ss_pred EEEcC--CCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 132 KTLKK--GDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 132 ~~l~~--GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
..|.+ +..++||+|..|.+.+.+++...++
T Consensus 120 v~Ls~en~~~L~IP~G~aHgf~~lsd~a~~ly 151 (196)
T 1wlt_A 120 AELNEENHYMLWIPPGFAHGFQALEDSIVIYF 151 (196)
T ss_dssp EEEETTTCCEEEECTTEEEEEEESSSEEEEEE
T ss_pred EEecCCCCCEEEeCCCeEEEEEEcCCCeEEEE
Confidence 68875 6889999999999999977533333
No 132
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=97.09 E-value=0.0067 Score=49.36 Aligned_cols=70 Identities=14% Similarity=0.186 Sum_probs=54.3
Q ss_pred eCCccccceecC---CCCEEEEEEeCEEEEEEEecC-----CCeEEEEEEcC--CCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 93 AKGGVIPIHTHP---AASEILLVVHGCITAGFISSS-----ANTVYVKTLKK--GDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 93 ~pgg~~~pH~Hp---~a~Ei~yVl~G~~~v~vv~~~-----~~~~~~~~l~~--GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
.+|.++.+|+|. .-.++++|++|++..-++|-. -++.....|.+ +..++||+|..|.+.+.+++...++.
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a~~~Y~ 157 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTIVMYK 157 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSSEEEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCCEEEEEE
Confidence 578899999995 358999999999877777632 14556668876 78999999999999999876443343
No 133
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.94 E-value=0.0055 Score=53.45 Aligned_cols=71 Identities=23% Similarity=0.341 Sum_probs=53.3
Q ss_pred EEEeC-CccccceecCCCCEEEEEEeCEEEEEEE-ecCC--------------------------------CeEEEEEEc
Q 028365 90 LDLAK-GGVIPIHTHPAASEILLVVHGCITAGFI-SSSA--------------------------------NTVYVKTLK 135 (210)
Q Consensus 90 v~l~p-gg~~~pH~Hp~a~Ei~yVl~G~~~v~vv-~~~~--------------------------------~~~~~~~l~ 135 (210)
+.+.| |+..++|+.+. .-++..+.|+=++.+. .+.. ...+..+|+
T Consensus 145 ~~~gp~g~~~~~H~D~~-dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDAY-TNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECSS-EEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECCh-hcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 55666 77899999865 7888899999888887 3310 012456999
Q ss_pred CCCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 136 KGDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 136 ~GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
|||++++|+|..|+..+.++++..-+
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsv 249 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNI 249 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEE
T ss_pred CCcEEEeCCCccEEEEECCCCceEEE
Confidence 99999999999999999755454444
No 134
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.93 E-value=0.021 Score=45.62 Aligned_cols=65 Identities=14% Similarity=0.095 Sum_probs=51.7
Q ss_pred eCCccccceecC---CCCEEEEEEeCEEEEEEEecCC-----CeEEEEEEcC--CCEEEECCCCeeEEEeCCCCC
Q 028365 93 AKGGVIPIHTHP---AASEILLVVHGCITAGFISSSA-----NTVYVKTLKK--GDIMIFPQGLLHFQVNSGADG 157 (210)
Q Consensus 93 ~pgg~~~pH~Hp---~a~Ei~yVl~G~~~v~vv~~~~-----~~~~~~~l~~--GDv~~~P~g~~H~~~N~g~~~ 157 (210)
.+|.++.+|+|. ....+++|++|++..-++|-.. ++.....|.+ +..++||+|..|.+.+.+++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a 129 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYA 129 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCe
Confidence 478899999995 5689999999998766666421 4456667776 578999999999999998763
No 135
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=96.92 E-value=0.0026 Score=52.35 Aligned_cols=64 Identities=22% Similarity=0.350 Sum_probs=52.5
Q ss_pred EEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 86 SLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 86 s~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
....++++||..+++|.| ...|+ +||+|++. + ++. .+.+|+.+..|.|..|.... |++.+.++.
T Consensus 147 ~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~----d--~~~----~~~~GsWlR~P~gs~h~~~a-g~~g~~i~~ 210 (223)
T 3o14_A 147 TVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----V--NDE----VLGRNAWLRLPEGEALSATA-GARGAKIWM 210 (223)
T ss_dssp EEEEEEECTTCEEEECCS-SCEEE-EEEEEEEE----E--TTE----EECTTEEEEECTTCCEEEEE-EEEEEEEEE
T ss_pred EEEEEEECCCCccCCCCC-CcEEE-EEEEeEEE----E--CCc----eECCCeEEEeCCCCccCcEE-CCCCeEEEE
Confidence 456688899999999999 77886 99999964 3 444 88999999999999998876 667777664
No 136
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.91 E-value=0.0043 Score=46.77 Aligned_cols=71 Identities=20% Similarity=0.233 Sum_probs=54.4
Q ss_pred CCccccce----ecCCCCEEEEEEeCEEEEEEEecCCC-e-EEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEec
Q 028365 94 KGGVIPIH----THPAASEILLVVHGCITAGFISSSAN-T-VYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFN 165 (210)
Q Consensus 94 pgg~~~pH----~Hp~a~Ei~yVl~G~~~v~vv~~~~~-~-~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~ 165 (210)
|+++.+.| +|+..-+.+.|++|++++...++.++ . .......+|+..++|++..|.++-..+ ++.+...|-
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f~leFy 99 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYFNIDFF 99 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEEEEEEE
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEEEEEEE
Confidence 66789999 58887899999999999987665233 1 223478999999999999999997655 666644443
No 137
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=96.90 E-value=0.009 Score=49.55 Aligned_cols=76 Identities=17% Similarity=0.201 Sum_probs=54.7
Q ss_pred eEEEEEEEeCCccccceecCCCCEEEEEEeC-EEEEEEEec--C------------CCeEE------EEEEcCCCEEEEC
Q 028365 85 LSLARLDLAKGGVIPIHTHPAASEILLVVHG-CITAGFISS--S------------ANTVY------VKTLKKGDIMIFP 143 (210)
Q Consensus 85 is~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G-~~~v~vv~~--~------------~~~~~------~~~l~~GDv~~~P 143 (210)
...-.+.+.+|...|.|.|+.-.|-+++.-| .+.+.+..+ . +|+.+ ...|+||+.+-++
T Consensus 106 YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~ 185 (246)
T 3kmh_A 106 YAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLP 185 (246)
T ss_dssp EEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEEC
T ss_pred ceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecC
Confidence 3444578899999999999999999999998 443333322 1 12222 2389999999999
Q ss_pred CCCeeEEEeCCCC-CEEE
Q 028365 144 QGLLHFQVNSGAD-GALG 160 (210)
Q Consensus 144 ~g~~H~~~N~g~~-~a~~ 160 (210)
+|+.|+++..+.. ++++
T Consensus 186 Pg~~H~F~ae~g~G~vli 203 (246)
T 3kmh_A 186 PGLYHSFWAEAGFGDVLV 203 (246)
T ss_dssp TTEEEEEEECTTSCCEEE
T ss_pred CCCEEEEEecCCCccEEE
Confidence 9999999876542 4444
No 138
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=96.90 E-value=0.0079 Score=50.54 Aligned_cols=70 Identities=16% Similarity=0.189 Sum_probs=53.3
Q ss_pred EEEEEEeCCccccceecCCCCE-EEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEE--CCCCeeEEEeCCC-CCEEEEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASE-ILLVVHGCITAGFISSSANTVYVKTLKKGDIMIF--PQGLLHFQVNSGA-DGALGFV 162 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~E-i~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~--P~g~~H~~~N~g~-~~a~~~~ 162 (210)
+....+.||.-+++|-|.+ .| +.||++|+++-. |. .|. ...+++||+-++ -+|+.|.-.|..+ +++.++-
T Consensus 66 ln~~~~~pg~gf~~HPHrg-~EtvTyvl~G~~~H~--DS-~Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQ 139 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPK-VDILNVILDGEAEYR--DS-EGN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQ 139 (256)
T ss_dssp EEEEEECTTCEEEEECCSS-EEEEEEEEESEEEEE--ET-TSC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEE
T ss_pred ccccccCCCCccCCcCCCC-cEEEEEEEeeEEEEE--eC-CCC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEE
Confidence 3456788998899999976 56 679999998765 43 355 349999999999 5568999999754 5666653
No 139
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.87 E-value=0.0028 Score=50.99 Aligned_cols=68 Identities=19% Similarity=0.303 Sum_probs=50.9
Q ss_pred EEEEEEeCCc-cccceecCCCCEEEEEEeCEEEEEEEecCC---------------------------------CeEEEE
Q 028365 87 LARLDLAKGG-VIPIHTHPAASEILLVVHGCITAGFISSSA---------------------------------NTVYVK 132 (210)
Q Consensus 87 ~~~v~l~pgg-~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~---------------------------------~~~~~~ 132 (210)
...+-+.+++ ..++|+.+. .-+..+++|+=++.+..+.. -+.+..
T Consensus 125 ~~~~wiG~~gs~t~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~ 203 (235)
T 4gjz_A 125 TINAWFGPQGTISPLHQDPQ-QNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSC 203 (235)
T ss_dssp EEEEEEECTTCEEEEECCSS-EEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEE
T ss_pred ceEEEEeCCCCCceeeeccc-cceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEE
Confidence 3445566655 467787764 77888999999999876520 022356
Q ss_pred EEcCCCEEEECCCCeeEEEeCCC
Q 028365 133 TLKKGDIMIFPQGLLHFQVNSGA 155 (210)
Q Consensus 133 ~l~~GDv~~~P~g~~H~~~N~g~ 155 (210)
+|+|||+++||+|..|.++|.+.
T Consensus 204 ~l~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 204 ILSPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp EECTTCEEEECTTCEEEEEESSS
T ss_pred EECCCCEEEeCCCCcEEEEECCC
Confidence 89999999999999999999753
No 140
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.84 E-value=0.023 Score=46.61 Aligned_cols=69 Identities=14% Similarity=0.143 Sum_probs=52.9
Q ss_pred eCCccccceecCC---CCEEEEEEeCEEEEEEEecC-----CCeEEEEEEcCC--CEEEECCCCeeEEEeCCCCCEEEE
Q 028365 93 AKGGVIPIHTHPA---ASEILLVVHGCITAGFISSS-----ANTVYVKTLKKG--DIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 93 ~pgg~~~pH~Hp~---a~Ei~yVl~G~~~v~vv~~~-----~~~~~~~~l~~G--Dv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
.+|.++.+|+|.. ...+++|++|++..-++|-. -++.....|.+- ..++||+|..|.+.+.+++...++
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~~ly 141 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDEATLCY 141 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCCeEEEE
Confidence 5788999999964 58999999999876666632 145566677764 789999999999999987743333
No 141
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.82 E-value=0.023 Score=46.15 Aligned_cols=65 Identities=17% Similarity=0.130 Sum_probs=51.6
Q ss_pred eCCccccceecCC---CCEEEEEEeCEEEEEEEecC-----CCeEEEEEEcC--CCEEEECCCCeeEEEeCCCCC
Q 028365 93 AKGGVIPIHTHPA---ASEILLVVHGCITAGFISSS-----ANTVYVKTLKK--GDIMIFPQGLLHFQVNSGADG 157 (210)
Q Consensus 93 ~pgg~~~pH~Hp~---a~Ei~yVl~G~~~v~vv~~~-----~~~~~~~~l~~--GDv~~~P~g~~H~~~N~g~~~ 157 (210)
.+|.++.+|+|.. ...+++|++|++..-++|-. -++.....|.+ +..++||+|..|.+.+.+++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~a 129 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDT 129 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTTE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCCe
Confidence 5788899999954 58999999999876666632 13456668877 478999999999999998773
No 142
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=96.73 E-value=0.038 Score=45.55 Aligned_cols=69 Identities=12% Similarity=0.122 Sum_probs=52.8
Q ss_pred eCCccccceecCC---CCEEEEEEeCEEEEEEEecC-----CCeEEEEEEcC--CCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 93 AKGGVIPIHTHPA---ASEILLVVHGCITAGFISSS-----ANTVYVKTLKK--GDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 93 ~pgg~~~pH~Hp~---a~Ei~yVl~G~~~v~vv~~~-----~~~~~~~~l~~--GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
.+|.++.+|+|.. ...+++|++|++..-++|-. -++.....|.+ +..++||+|..|.+.+.+++..+++
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~vly 152 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMY 152 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSEEEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCCEEEEE
Confidence 5788899999964 48999999999876666631 24456667776 4789999999999999987743333
No 143
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=96.57 E-value=0.022 Score=47.40 Aligned_cols=70 Identities=16% Similarity=0.257 Sum_probs=53.0
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEE--CCCCeeEEEeCCC-CCEEEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIF--PQGLLHFQVNSGA-DGALGF 161 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~--P~g~~H~~~N~g~-~~a~~~ 161 (210)
+..-.+.||.-+++|-|.+-..+.||++|+++-. |. .|. ...+++||+-++ -+|+.|.-.|..+ +++.++
T Consensus 43 ~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS-~Gn--~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~l 115 (242)
T 1tq5_A 43 INDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DS-MGN--KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLY 115 (242)
T ss_dssp EEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ES-SSC--EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEE
T ss_pred eccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eC-CCC--cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEE
Confidence 3456788988899999976444889999998765 43 355 349999999888 6679999999654 566654
No 144
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=96.54 E-value=0.033 Score=45.15 Aligned_cols=70 Identities=13% Similarity=0.149 Sum_probs=54.8
Q ss_pred eCCccccceecC---CCCEEEEEEeCEEEEEEEecC-----CCeEEEEEEcC--CCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 93 AKGGVIPIHTHP---AASEILLVVHGCITAGFISSS-----ANTVYVKTLKK--GDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 93 ~pgg~~~pH~Hp---~a~Ei~yVl~G~~~v~vv~~~-----~~~~~~~~l~~--GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
.+|.++.+|+|. .-..+++|++|++.--++|-. -++.....|.+ +..++||+|..|.+.+.+++..+++.
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y~ 131 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVFL 131 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTEEEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCeEEEEe
Confidence 578899999994 458999999999887777732 24556667876 77899999999999998876444443
No 145
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.45 E-value=0.015 Score=50.76 Aligned_cols=73 Identities=14% Similarity=0.142 Sum_probs=55.3
Q ss_pred EEEeCC-ccccceecCCCCEEEEEEeCEEEEEEEecCC----------------------------------CeEEEEEE
Q 028365 90 LDLAKG-GVIPIHTHPAASEILLVVHGCITAGFISSSA----------------------------------NTVYVKTL 134 (210)
Q Consensus 90 v~l~pg-g~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~----------------------------------~~~~~~~l 134 (210)
+.+.+. ...++|+.+. .-+..+++|+=++.+..+.. -+.+..+|
T Consensus 187 l~iG~~gs~t~~H~D~~-~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQ-QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCSE-EEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECCh-hcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 556654 4679999876 78889999998888775420 03467799
Q ss_pred cCCCEEEECCCCeeEEEeCCC-CCEEEEEE
Q 028365 135 KKGDIMIFPQGLLHFQVNSGA-DGALGFVS 163 (210)
Q Consensus 135 ~~GDv~~~P~g~~H~~~N~g~-~~a~~~~~ 163 (210)
++||+++||+|..|.+.|.++ ...+.+..
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~~sisvn~ 295 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGGITITVNF 295 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSCCEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCCcEEEEEE
Confidence 999999999999999999873 44444443
No 146
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=96.07 E-value=0.04 Score=44.46 Aligned_cols=70 Identities=20% Similarity=0.225 Sum_probs=53.2
Q ss_pred EEEEEEEeCCccccceecCCCCEEEE----EEeC-EEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEE
Q 028365 86 SLARLDLAKGGVIPIHTHPAASEILL----VVHG-CITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALG 160 (210)
Q Consensus 86 s~~~v~l~pgg~~~pH~Hp~a~Ei~y----Vl~G-~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~ 160 (210)
++....+.||+.+.||..+....+-+ ++-. ...+.+ +++.+ ..++|++++|.-...|...|.++++-++
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V----~~~~~--~w~eGe~~~fDds~~Hev~N~~d~~Rvv 176 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRC----ANETK--TWEEGKVLIFDDSFEHEVWQDASSFRLI 176 (197)
T ss_dssp EEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEE----TTEEE--CCCBTCEEEECTTSCEEEEECSSSCEEE
T ss_pred eEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEE----CCEEE--EeeCCcEEEEcCCeEEEEEECCCCCEEE
Confidence 45667899999999999987655543 2222 355555 67755 9999999999999999999998875444
Q ss_pred E
Q 028365 161 F 161 (210)
Q Consensus 161 ~ 161 (210)
+
T Consensus 177 L 177 (197)
T 3rcq_A 177 F 177 (197)
T ss_dssp E
T ss_pred E
Confidence 3
No 147
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=95.97 E-value=0.032 Score=50.34 Aligned_cols=65 Identities=22% Similarity=0.365 Sum_probs=48.9
Q ss_pred EEEEeCCcc--ccceecCCCCEEEEEEeCEEEEEEEecCC---------------CeEEEEEEcCCCEEEECCCCeeEEE
Q 028365 89 RLDLAKGGV--IPIHTHPAASEILLVVHGCITAGFISSSA---------------NTVYVKTLKKGDIMIFPQGLLHFQV 151 (210)
Q Consensus 89 ~v~l~pgg~--~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~---------------~~~~~~~l~~GDv~~~P~g~~H~~~ 151 (210)
.+.+.|+|. .++||-.. .-+++.++|+=++.+..+.. ...+..+|+|||++|+|+|..|+..
T Consensus 142 n~y~~~~g~~g~~~H~D~~-dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~ 220 (442)
T 2xdv_A 142 NVYITPAGSQGLPPHYDDV-EVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQAD 220 (442)
T ss_dssp EEEEECTTCBCSCSEECSS-EEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEE
T ss_pred ceEECCCCCCCccceECCc-ceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEE
Confidence 445666664 46999754 77888899998888776521 1123569999999999999999999
Q ss_pred eCC
Q 028365 152 NSG 154 (210)
Q Consensus 152 N~g 154 (210)
+.+
T Consensus 221 s~~ 223 (442)
T 2xdv_A 221 TPA 223 (442)
T ss_dssp CCS
T ss_pred ecC
Confidence 875
No 148
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.95 E-value=0.028 Score=48.76 Aligned_cols=72 Identities=17% Similarity=0.217 Sum_probs=53.3
Q ss_pred EEEEeCC-ccccceecCCCCEEEEEEeCEEEEEEEecCC-----------------------------CeEEEEEEcCCC
Q 028365 89 RLDLAKG-GVIPIHTHPAASEILLVVHGCITAGFISSSA-----------------------------NTVYVKTLKKGD 138 (210)
Q Consensus 89 ~v~l~pg-g~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~-----------------------------~~~~~~~l~~GD 138 (210)
.+.+.+. +..++|+.+. .-+...++|+=++.+..+.. -+.+..+|++||
T Consensus 170 ~l~~g~~g~~~~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD 248 (338)
T 3al5_A 170 VFRISSPGLQLWTHYDVM-DNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGD 248 (338)
T ss_dssp EEEEECTTCEEEEECCSS-EEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTC
T ss_pred eeEECCCCCCccceECCc-ccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCC
Confidence 3445554 4578899875 67888999998888775410 024677999999
Q ss_pred EEEECCCCeeEEEeCCCCCEEEEEE
Q 028365 139 IMIFPQGLLHFQVNSGADGALGFVS 163 (210)
Q Consensus 139 v~~~P~g~~H~~~N~g~~~a~~~~~ 163 (210)
+++||+|..|++.|.+ ..+.+..
T Consensus 249 ~LyiP~gWwH~v~~l~--~sisvn~ 271 (338)
T 3al5_A 249 VLFIPALWFHNVISEE--FGVGVNI 271 (338)
T ss_dssp EEEECTTCEEEEEESS--CEEEEEE
T ss_pred EEEECCCCeEEEeeCC--CEEEEEE
Confidence 9999999999999984 4555553
No 149
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=95.86 E-value=0.029 Score=47.59 Aligned_cols=40 Identities=13% Similarity=0.086 Sum_probs=36.7
Q ss_pred CEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEe
Q 028365 107 SEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVN 152 (210)
Q Consensus 107 ~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N 152 (210)
.-|+++++|+..+.+ +++.+ .|++||++.||++..|.+.-
T Consensus 227 d~wiWqLEGss~Vt~----~~q~~--~L~~~DsLLIpa~~~y~~~r 266 (286)
T 2qnk_A 227 DVWLWQLEGSSVVTM----GGRRL--SLAPDDSLLVLAGTSYAWER 266 (286)
T ss_dssp CEEEEEEESCEEEEE----TTEEE--EECTTEEEEECTTCCEEEEE
T ss_pred cEEEEEEcCceEEEE----CCeEE--eccCCCEEEecCCCeEEEEe
Confidence 689999999999998 89977 99999999999999998875
No 150
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=95.81 E-value=0.18 Score=42.35 Aligned_cols=84 Identities=20% Similarity=0.142 Sum_probs=64.9
Q ss_pred ccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEE
Q 028365 63 SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIF 142 (210)
Q Consensus 63 ~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~ 142 (210)
|...|+.+.++. .+-|-+..+|.++|+--.|+=.|.--.| +||++|++.+ +++ .+.+|.-+++
T Consensus 75 ~~~~gs~RlLs~------~d~GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~------G~~----~l~~h~Y~f~ 137 (303)
T 2qdr_A 75 NIAPGSRRLLTW------HDSGASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQL------GEW----QLNKHSYSFI 137 (303)
T ss_dssp TSCCEEEEEEEE------CTTSCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEE------TTE----EECTTEEEEE
T ss_pred CcCccceeeccc------CCCCcceEEEEecCCCCCCCcccccceE-EEEEEeEEEe------CCE----EecCCceEEe
Confidence 344556665543 3446788899999999999988866677 9999999765 455 8999999999
Q ss_pred CCCCee-EEEeCCCCCEEEEEE
Q 028365 143 PQGLLH-FQVNSGADGALGFVS 163 (210)
Q Consensus 143 P~g~~H-~~~N~g~~~a~~~~~ 163 (210)
|+|+.- .++-.|.+++.++..
T Consensus 138 PaGV~~~~~kv~~~~g~~iL~f 159 (303)
T 2qdr_A 138 PAGVRIGSWKVLGGEEAEILWM 159 (303)
T ss_dssp CTTCCBCCEEEETTSCEEEEEE
T ss_pred cCCCccCceeecCCCCcEEEEE
Confidence 999965 555668888888765
No 151
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=95.72 E-value=0.014 Score=49.91 Aligned_cols=76 Identities=22% Similarity=0.219 Sum_probs=50.9
Q ss_pred eEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEec-C-------CCeEEEEEEcCCCEEEECCCCeeEEEeCCCC
Q 028365 85 LSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS-S-------ANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD 156 (210)
Q Consensus 85 is~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~-~-------~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~ 156 (210)
+.++|+.+.||+.+.||.=+ .|+.....|.+++.+--. + +++.+ .+++|+++++....+|+..|.|++
T Consensus 91 l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~--~m~~GE~w~~d~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 91 LQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDTVI--HMRPGEIWFLDAATVHSAVNFSEI 166 (290)
T ss_dssp EEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTEEE--CCCTTEEEECCTTSCEEEEESSSS
T ss_pred hheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCEEE--ecCCCCEEEEcCCCeeEEEcCCCC
Confidence 37788899999999887443 365555567766554211 1 56655 999999999999999999999986
Q ss_pred -CEEEEEEe
Q 028365 157 -GALGFVSF 164 (210)
Q Consensus 157 -~a~~~~~f 164 (210)
...++.-+
T Consensus 167 ~RIhLv~D~ 175 (290)
T 1e5r_A 167 SRQSLCVDF 175 (290)
T ss_dssp CCCEEEEEE
T ss_pred CeEEEEEEe
Confidence 45555444
No 152
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=95.69 E-value=0.077 Score=47.96 Aligned_cols=63 Identities=5% Similarity=-0.025 Sum_probs=46.8
Q ss_pred ccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEecC
Q 028365 98 IPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNS 166 (210)
Q Consensus 98 ~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s 166 (210)
...-...+++|++|+.+|++++.- .-... .+++||+++||+|+.+.+.-.+.....++.++..
T Consensus 170 ~~~f~NaDGD~Livpq~G~l~i~T----EfG~L--~v~pgei~VIPRGi~frv~l~~p~Rgyi~E~~g~ 232 (471)
T 1eyb_A 170 NRCFYNSDGDFLIVPQKGNLLIYT----EFGKM--LVQPNEICVIQRGMRFSIDVFEETRGYILEVYGV 232 (471)
T ss_dssp SEEEEESSEEEEEEEEESCEEEEE----TTEEE--EECTTEEEEECTTCCEEEECSSSEEEEEEEEESC
T ss_pred cceeecCCCCEEEEEEeCCEEEEE----ecccE--EeccCCEEEECCccEEEEeeCCCceEEEEEccCC
Confidence 456667789999999999998875 43433 8999999999999999887655223344445543
No 153
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=95.67 E-value=0.098 Score=44.19 Aligned_cols=79 Identities=15% Similarity=0.228 Sum_probs=51.3
Q ss_pred ceEEEEEEEeCCcc---ccceecCCC--C------EEEEE-Ee---CEEEEEEEecC--CCeEEEEEEcCCCEEEECCCC
Q 028365 84 GLSLARLDLAKGGV---IPIHTHPAA--S------EILLV-VH---GCITAGFISSS--ANTVYVKTLKKGDIMIFPQGL 146 (210)
Q Consensus 84 gis~~~v~l~pgg~---~~pH~Hp~a--~------Ei~yV-l~---G~~~v~vv~~~--~~~~~~~~l~~GDv~~~P~g~ 146 (210)
.+-+..+ +.|||. .|||.|.+. . |+.|. +. |-+.-.+-+.. .++ +..++-||++++|+|.
T Consensus 152 ~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de--~~~V~~~d~VlvP~Gy 228 (270)
T 2qjv_A 152 SLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDE--CMAVYNRDVVXVPXGY 228 (270)
T ss_dssp SCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEE--EEEEETTCEEEESSSB
T ss_pred eEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCce--EEEEECCCEEecCCCc
Confidence 3566666 778884 599999864 4 88875 33 44443332221 134 4599999999999999
Q ss_pred eeEEEeCCCCCEEEEEEecC
Q 028365 147 LHFQVNSGADGALGFVSFNS 166 (210)
Q Consensus 147 ~H~~~N~g~~~a~~~~~f~s 166 (210)
|-.....-....++.+.-.
T Consensus 229 -Hp~~a~pGy~~YylwvMaG 247 (270)
T 2qjv_A 229 -HPVATIAGYDNYYLNVMAG 247 (270)
T ss_dssp -CCEEECTTCEEEEEEEEEC
T ss_pred -CCCcCCCCcccEEEEEEEC
Confidence 9765443334556666654
No 154
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=95.15 E-value=0.097 Score=45.49 Aligned_cols=66 Identities=18% Similarity=0.212 Sum_probs=50.0
Q ss_pred EEEeCC-ccccceecCCCC-EEEEEEeCEEEEEEEecCC--------------------------------------CeE
Q 028365 90 LDLAKG-GVIPIHTHPAAS-EILLVVHGCITAGFISSSA--------------------------------------NTV 129 (210)
Q Consensus 90 v~l~pg-g~~~pH~Hp~a~-Ei~yVl~G~~~v~vv~~~~--------------------------------------~~~ 129 (210)
+-+.+. ...++|+++... -+..++.|+=++.+..+.. .+.
T Consensus 176 ~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~ 255 (336)
T 3k2o_A 176 FVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKP 255 (336)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCC
T ss_pred EEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCce
Confidence 455554 457899987643 5899999998888876520 012
Q ss_pred EEEEEcCCCEEEECCCCeeEEEeCCC
Q 028365 130 YVKTLKKGDIMIFPQGLLHFQVNSGA 155 (210)
Q Consensus 130 ~~~~l~~GDv~~~P~g~~H~~~N~g~ 155 (210)
+...+++||++++|+|..|++.|.++
T Consensus 256 ~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 256 LEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSC
T ss_pred EEEEECCCCEEEeCCCCcEEEecCCC
Confidence 45689999999999999999999864
No 155
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=95.12 E-value=0.13 Score=46.82 Aligned_cols=70 Identities=19% Similarity=0.279 Sum_probs=50.3
Q ss_pred EEEEEeCCcc--ccceecCCCCEEEEEEeCEEEEEEEecCC-------------------CeEEEEEEcCCCEEEECCCC
Q 028365 88 ARLDLAKGGV--IPIHTHPAASEILLVVHGCITAGFISSSA-------------------NTVYVKTLKKGDIMIFPQGL 146 (210)
Q Consensus 88 ~~v~l~pgg~--~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~-------------------~~~~~~~l~~GDv~~~P~g~ 146 (210)
+.+.+.|+|. +++|+-+. .-++.=++|+=+..+..+.. ...+..+|++||++++|+|.
T Consensus 166 ~N~Y~tp~Gs~g~~pH~D~~-DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~ 244 (489)
T 4diq_A 166 SNVYLTPPNSQGFAPHYDDI-EAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGF 244 (489)
T ss_dssp EEEEEECSSBCCSCCBCCSS-EEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTC
T ss_pred ceEEecCCCcccccCccCCc-ceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCC
Confidence 3455666664 57999865 66777788887777765421 11235699999999999999
Q ss_pred eeEEEeCCCCCE
Q 028365 147 LHFQVNSGADGA 158 (210)
Q Consensus 147 ~H~~~N~g~~~a 158 (210)
.|+..+.+++..
T Consensus 245 ~H~~~s~~~~~S 256 (489)
T 4diq_A 245 IHQAECQDGVHS 256 (489)
T ss_dssp EEEEEBCSSCCE
T ss_pred ceEEEecCCCce
Confidence 999999865443
No 156
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=94.81 E-value=0.074 Score=48.55 Aligned_cols=66 Identities=17% Similarity=0.231 Sum_probs=50.3
Q ss_pred EEEeC-CccccceecCCCC-EEEEEEeCEEEEEEEecC------------------------CCeEEEEEEcCCCEEEEC
Q 028365 90 LDLAK-GGVIPIHTHPAAS-EILLVVHGCITAGFISSS------------------------ANTVYVKTLKKGDIMIFP 143 (210)
Q Consensus 90 v~l~p-gg~~~pH~Hp~a~-Ei~yVl~G~~~v~vv~~~------------------------~~~~~~~~l~~GDv~~~P 143 (210)
+-+.| |+..++|..+..+ -|..+++|+=++.+..|. ..+-+..++++||+++||
T Consensus 270 ~~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIP 349 (488)
T 3kv5_D 270 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 349 (488)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeC
Confidence 34444 5568999987644 467899999999888662 012346699999999999
Q ss_pred CCCeeEEEeCCC
Q 028365 144 QGLLHFQVNSGA 155 (210)
Q Consensus 144 ~g~~H~~~N~g~ 155 (210)
.|..|++.|..+
T Consensus 350 sGWwH~V~nled 361 (488)
T 3kv5_D 350 TGWIHAVLTSQD 361 (488)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCceEEeeCCCC
Confidence 999999999743
No 157
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=94.79 E-value=0.11 Score=46.89 Aligned_cols=67 Identities=16% Similarity=0.192 Sum_probs=50.7
Q ss_pred EEEeC-CccccceecCCCC-EEEEEEeCEEEEEEEecCC------------------------CeEEEEEEcCCCEEEEC
Q 028365 90 LDLAK-GGVIPIHTHPAAS-EILLVVHGCITAGFISSSA------------------------NTVYVKTLKKGDIMIFP 143 (210)
Q Consensus 90 v~l~p-gg~~~pH~Hp~a~-Ei~yVl~G~~~v~vv~~~~------------------------~~~~~~~l~~GDv~~~P 143 (210)
+-+.| |+..+.|+.+..+ -|..+++|+=++.++.|.. .+.+..++++||+++||
T Consensus 200 ~~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIP 279 (451)
T 2yu1_A 200 CLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIP 279 (451)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEEC
T ss_pred EEEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeC
Confidence 34445 5568999988643 5778999999888876520 12345689999999999
Q ss_pred CCCeeEEEeCCCC
Q 028365 144 QGLLHFQVNSGAD 156 (210)
Q Consensus 144 ~g~~H~~~N~g~~ 156 (210)
.|..|.+.|..+.
T Consensus 280 sGWwH~V~nleds 292 (451)
T 2yu1_A 280 SGWIHAVYTPTDT 292 (451)
T ss_dssp TTCEEEEECSSCE
T ss_pred CCceEEEecCCCe
Confidence 9999999997544
No 158
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=94.66 E-value=1.5 Score=35.86 Aligned_cols=149 Identities=12% Similarity=0.123 Sum_probs=85.4
Q ss_pred CCCCCCCceEEecCCCCCCccccCCceEEEeeccccC------cccCcceEEEEEEEeCCccccceecCCCCEEEEEEeC
Q 028365 42 PAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFP------AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHG 115 (210)
Q Consensus 42 ~~~~~~~df~f~~l~~~~~~~~~~gg~~~~~~~~~~P------~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G 115 (210)
+...+++++.=. |...+ .+.||+.++...+... +-... .+.-..-+.+|...-+|.- ++.|+.+...|
T Consensus 16 ~~~~ta~~lI~~-L~L~P---HPEGG~yrEt~Rs~~~v~~~~~~~R~~-~TaIYfLL~~g~~S~~HRv-~sdEiW~~h~G 89 (225)
T 3m3i_A 16 PPQNTAEFWIKR-LQLVP---HPEGGYYSEVVRSAHKVDNEEGNRRHA-YTTIYFLCTPESPSHLHRL-CSDETWMYHAG 89 (225)
T ss_dssp --CCCHHHHHHH-TTCEE---CTTSSEEEEEEECSSEEECTTSCEEES-CEEEEEEECSSSCEEEEEC-SSEEEEEEEEE
T ss_pred CCCCCHHHHHHH-CCCcc---CCCCceEEEEEECCCcccCCCCCCccc-ceeEEEEecCCCCcccEEe-cCCEEEEEECC
Confidence 334445554333 43322 5689999988776442 11111 2222344677775444443 67999999999
Q ss_pred E-EEEEEEecCCC----------------------------eEEEEEE----cCCCE--EEECCCCeeEEEeCCCC----
Q 028365 116 C-ITAGFISSSAN----------------------------TVYVKTL----KKGDI--MIFPQGLLHFQVNSGAD---- 156 (210)
Q Consensus 116 ~-~~v~vv~~~~~----------------------------~~~~~~l----~~GDv--~~~P~g~~H~~~N~g~~---- 156 (210)
. +++.++++ ++ +..+..| .+|+. ++||.|........+++
T Consensus 90 ~pL~l~li~~-dG~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~ 168 (225)
T 3m3i_A 90 DPLQLHVILK-DPQDEDRIAAQPPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADGQ 168 (225)
T ss_dssp SCEEEEEEES-SSTTTTC------------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTCS
T ss_pred CCEEEEEEcC-CCcccccccccccccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCcC
Confidence 8 67888876 44 3344456 44775 89999998877766543
Q ss_pred -CEEEEEEecCCCCCceechHhHHhhcCCHHHHHHhcCCCHHHHHHHh
Q 028365 157 -GALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLK 203 (210)
Q Consensus 157 -~a~~~~~f~s~~pg~~~i~~~~f~s~~p~~vla~~f~~~~~~v~~l~ 203 (210)
.-.+++..- .||+..-. |. ..+.+-|.+.|.--++.|++|-
T Consensus 169 ~~~sLVsCtV--aPGFdF~D---Fe-l~~~~~L~~~~P~~~~~I~~lt 210 (225)
T 3m3i_A 169 AGYSLVSCIV--SPGFDYRD---FE-IFTQAQLMELYPQHEAVIKQMA 210 (225)
T ss_dssp SSCEEEEEEE--ESCCCGGG---CE-ECBHHHHHHHCGGGHHHHHHHS
T ss_pred CCeEEEEEEE--cCCccchh---cE-ecCHHHHHHHCchHHHHHHHhc
Confidence 345554332 24544211 21 1345555556666666777664
No 159
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=94.43 E-value=0.18 Score=45.59 Aligned_cols=67 Identities=15% Similarity=0.214 Sum_probs=50.2
Q ss_pred EEEeC-CccccceecCCCC-EEEEEEeCEEEEEEEecC------------------------CCeEEEEEEcCCCEEEEC
Q 028365 90 LDLAK-GGVIPIHTHPAAS-EILLVVHGCITAGFISSS------------------------ANTVYVKTLKKGDIMIFP 143 (210)
Q Consensus 90 v~l~p-gg~~~pH~Hp~a~-Ei~yVl~G~~~v~vv~~~------------------------~~~~~~~~l~~GDv~~~P 143 (210)
+-+.| |+...+|..+..+ -|..+++|+=++.++.|. ..+-+..++++||+++||
T Consensus 235 ~~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIP 314 (447)
T 3kv4_A 235 CLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIP 314 (447)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecC
Confidence 33444 5568899987654 467899999998887652 012346699999999999
Q ss_pred CCCeeEEEeCCCC
Q 028365 144 QGLLHFQVNSGAD 156 (210)
Q Consensus 144 ~g~~H~~~N~g~~ 156 (210)
.|..|++.|..+.
T Consensus 315 sGWwH~V~nleds 327 (447)
T 3kv4_A 315 TGWIHAVLTPVDC 327 (447)
T ss_dssp TTCEEEEEESSCE
T ss_pred CCCeEEEecCCCE
Confidence 9999999997443
No 160
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=94.21 E-value=0.39 Score=34.12 Aligned_cols=56 Identities=16% Similarity=0.051 Sum_probs=41.7
Q ss_pred EEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEe
Q 028365 90 LDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVN 152 (210)
Q Consensus 90 v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N 152 (210)
-.+.||. ...-+ .+.|++-|++|++++.+ .|..-...+++||.+.+|.+.---++-
T Consensus 28 GVm~pGe-ytF~T--~~~E~M~vvsG~~~V~l----pg~~ew~~~~aGesF~Vpans~F~l~v 83 (94)
T 2oyz_A 28 GVMLPGE-YTFGT--QAPERMTVVKGALVVKR----VGEADWTTYSSGESFDVEGNSSFELQV 83 (94)
T ss_dssp EEECSEE-EEEEE--SSCEEEEEEESEEEEEE----TTCSSCEEEETTCEEEECSSEEEEEEE
T ss_pred EEEeceE-EEEcC--CCeEEEEEEEeEEEEEc----CCCCcCEEECCCCEEEECCCCEEEEEE
Confidence 3456764 33334 46899999999999998 333225699999999999998766655
No 161
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=94.18 E-value=0.4 Score=40.40 Aligned_cols=92 Identities=18% Similarity=0.256 Sum_probs=60.8
Q ss_pred cccCCceEEEeeccc-cCcccCcceEEEEEEEeCCccccceecCCCCE-EEEEEeCEEEEEEEecCCCeEEEEEEcCCCE
Q 028365 62 TSIINAAVTPAFVAQ-FPAVNGLGLSLARLDLAKGGVIPIHTHPAASE-ILLVVHGCITAGFISSSANTVYVKTLKKGDI 139 (210)
Q Consensus 62 ~~~~gg~~~~~~~~~-~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~E-i~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv 139 (210)
....|..++.+-... +..+.-+ +-+.. ...++.-+++|-|.+ .| +.||++|+++-. |. .|. ...+++||+
T Consensus 17 ~~G~g~~v~R~~~~~~~~~~gpf-~~ld~-~~~~~~gf~~HPHrg-~EtVTyvl~G~~~H~--DS-~Gn--~~~i~~Gdv 88 (277)
T 2p17_A 17 TNSPIHRSGSVLEPGNWQEYDPF-LLLME-DIFERGTFDVHPHRG-IETVTYVISGELEHF--DS-KAG--HSTLGPGDV 88 (277)
T ss_dssp EEETTEEEEEEECSSCHHHHTTE-EEEEE-EEECTTCCCCEEECS-EEEEEEEEESCEEEE--ET-TTE--EEEECTTCE
T ss_pred ccCCCeEEeecCCcccccccCCE-EEEec-CCCCCCCCCCCCCCC-cEEEEEEEEeEEEEe--eC-CCC--ceEECCCeE
Confidence 345666666554321 1112111 23444 667888899999965 77 679999997665 44 455 449999999
Q ss_pred EEECC--CCeeEEEeCCCCCEEEE
Q 028365 140 MIFPQ--GLLHFQVNSGADGALGF 161 (210)
Q Consensus 140 ~~~P~--g~~H~~~N~g~~~a~~~ 161 (210)
=++-+ |+.|.-.|..+++...+
T Consensus 89 QwMtAG~GI~HsE~~~~~~~~~~l 112 (277)
T 2p17_A 89 QWMTAGRGVVHKEDPASGSTVHSL 112 (277)
T ss_dssp EEEECTTCEEEEEEECTTCCEEEE
T ss_pred EEEeCCCCEEEEeecCCCCCEEEE
Confidence 66665 77899999876676664
No 162
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=93.99 E-value=0.15 Score=44.95 Aligned_cols=66 Identities=15% Similarity=0.244 Sum_probs=50.0
Q ss_pred EEEeC-CccccceecCCCCE-EEEEEeCEEEEEEEecC------------------------CCeEEEEEEcCCCEEEEC
Q 028365 90 LDLAK-GGVIPIHTHPAASE-ILLVVHGCITAGFISSS------------------------ANTVYVKTLKKGDIMIFP 143 (210)
Q Consensus 90 v~l~p-gg~~~pH~Hp~a~E-i~yVl~G~~~v~vv~~~------------------------~~~~~~~~l~~GDv~~~P 143 (210)
+-+.| |+..++|..+..+- |..+++|+=++.+..|. ..+-+...+++||+++||
T Consensus 151 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIP 230 (371)
T 3k3o_A 151 CLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIP 230 (371)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeC
Confidence 34444 55689999887553 67899999988887552 012356699999999999
Q ss_pred CCCeeEEEeCCC
Q 028365 144 QGLLHFQVNSGA 155 (210)
Q Consensus 144 ~g~~H~~~N~g~ 155 (210)
.|..|++.|..+
T Consensus 231 sGWwH~V~nled 242 (371)
T 3k3o_A 231 TGWIHAVLTPVD 242 (371)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCCeEEEecCCC
Confidence 999999999643
No 163
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=93.80 E-value=0.39 Score=35.06 Aligned_cols=79 Identities=11% Similarity=0.091 Sum_probs=52.0
Q ss_pred cCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEEC
Q 028365 64 IINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFP 143 (210)
Q Consensus 64 ~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P 143 (210)
.+.|.++..... ++.- -....-.+.||. -|.+....+.|++-|++|++++.+ .+..-.+.+++|+.|.+|
T Consensus 21 YFdGkV~S~~~~-~~dG----~~kTlGVm~PGe-~~YtF~T~~~E~MevvsG~l~V~L----pg~~eW~~~~aGesF~Vp 90 (111)
T 3hqx_A 21 YFGGLCISHTVQ-FEDG----TKKTLGVILPTE-QPLTFETHVPERMEIISGECRVKI----ADSTESELFRAGQSFYVP 90 (111)
T ss_dssp ETTTTEEEEEEE-CTTS----CEEEEEEECCCS-SCEEEECSSCEEEEEEESEEEEEE----TTCSSCEEEETTCEEEEC
T ss_pred EeCCeEEEEEEE-eCCC----CEEEEEEEeccc-cceEEcCCCcEEEEEEEeEEEEEc----CCcccCEEeCCCCEEEEC
Confidence 466666655442 2211 112223456763 234555567899999999999998 343335699999999999
Q ss_pred CCCeeEEEe
Q 028365 144 QGLLHFQVN 152 (210)
Q Consensus 144 ~g~~H~~~N 152 (210)
.+.---++-
T Consensus 91 anssF~lkv 99 (111)
T 3hqx_A 91 GNSLFKIET 99 (111)
T ss_dssp TTCEEEEEC
T ss_pred CCCcEEEEE
Confidence 998876654
No 164
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=93.79 E-value=0.17 Score=44.94 Aligned_cols=66 Identities=17% Similarity=0.231 Sum_probs=50.3
Q ss_pred EEEeC-CccccceecCCCC-EEEEEEeCEEEEEEEecC------------------------CCeEEEEEEcCCCEEEEC
Q 028365 90 LDLAK-GGVIPIHTHPAAS-EILLVVHGCITAGFISSS------------------------ANTVYVKTLKKGDIMIFP 143 (210)
Q Consensus 90 v~l~p-gg~~~pH~Hp~a~-Ei~yVl~G~~~v~vv~~~------------------------~~~~~~~~l~~GDv~~~P 143 (210)
+-+.| |+..++|+.+..+ -|..+++|+=++.+..|. ..+-+...+++||+++||
T Consensus 179 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIP 258 (397)
T 3kv9_A 179 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 258 (397)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeC
Confidence 44555 5568899998754 467899999988888652 012346699999999999
Q ss_pred CCCeeEEEeCCC
Q 028365 144 QGLLHFQVNSGA 155 (210)
Q Consensus 144 ~g~~H~~~N~g~ 155 (210)
.|..|++.|..+
T Consensus 259 sGW~H~V~nled 270 (397)
T 3kv9_A 259 TGWIHAVLTSQD 270 (397)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCCeEEccCCcC
Confidence 999999999733
No 165
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=93.06 E-value=2.6 Score=33.08 Aligned_cols=129 Identities=13% Similarity=0.153 Sum_probs=80.6
Q ss_pred ccC-CceEEEeecccc-------CcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCE-EEEEEEecCCCeEEEEE
Q 028365 63 SII-NAAVTPAFVAQF-------PAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGC-ITAGFISSSANTVYVKT 133 (210)
Q Consensus 63 ~~~-gg~~~~~~~~~~-------P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~-~~v~vv~~~~~~~~~~~ 133 (210)
.+. ||+.++...+.. .+-+.. .+.-..-+.+|....+|.- +++|+.+...|. +++.++++ +++..+..
T Consensus 24 HPEEGG~yrEt~rs~~~v~~~~~~~~R~~-~TaIYfLL~~~~~S~~HRv-~sdEiW~~~~G~pL~l~~~~~-dG~~~~~~ 100 (172)
T 3loi_A 24 HPASGGWFRETYRSDVQVEAEGFDGKRSV-LTMIYYLMQAGQPDPFHRV-KSDETFVHNLGGSMKIHMIHP-DGSYSCSI 100 (172)
T ss_dssp CTTSSSEEEEEEECSCEECCTTSSSCEES-CEEEEEEEETTCCEEEEEC-SSEEEEEEEEESCEEEEEECT-TSCEEEEE
T ss_pred CCcCCCeEEEEEECcCcccCCCCCCCccc-ceEEEEEEcCCCCccCEEe-cCCEEEEEEcCCCEEEEEEcC-CCceEEEE
Confidence 466 999888776532 122222 2333345777775555554 679999999996 68998887 66655555
Q ss_pred Ec----CCC---EEEECCCCeeEEEeCCCCCEEEEEEecCCCCCceechHhHHhhcCCHHHHHHhcCCCHHHHHHHh
Q 028365 134 LK----KGD---IMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLK 203 (210)
Q Consensus 134 l~----~GD---v~~~P~g~~H~~~N~g~~~a~~~~~f~s~~pg~~~i~~~~f~s~~p~~vla~~f~~~~~~v~~l~ 203 (210)
|. +|+ -++||+|....... ..-.++..-- .||+..-. |. ..+.+-|.+.|.--++.|++|-
T Consensus 101 LG~d~~~Ge~~pQ~vVP~G~WqaA~~---~~~~LVsctV--aPGF~f~d---fe-l~~~~~L~~~~P~~~~~I~~lt 168 (172)
T 3loi_A 101 LGNPLEHPEARHQVVVPRRVWFAQEV---DGYCLASVLV--APGFDFKD---FS-LGKREELIKEYPQHRDVIMRCT 168 (172)
T ss_dssp ESCTTTSTTCBSEEEECTTCEEEEEE---SSEEEEEEEE--ESCCCGGG---CE-ECCHHHHHHHCGGGHHHHHHTS
T ss_pred eCCCcccCCcceEEEECCCEEEEEEe---CCcEEEEEEE--cCCccchh---cE-EcCHHHHHHHCchHHHHHHHhc
Confidence 54 578 48999998877665 3444444332 35554211 22 2456666666776677777764
No 166
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=92.90 E-value=0.3 Score=43.29 Aligned_cols=66 Identities=15% Similarity=0.234 Sum_probs=49.7
Q ss_pred EEEeC-CccccceecCCCC-EEEEEEeCEEEEEEEecCC------------------------CeEEEEEEcCCCEEEEC
Q 028365 90 LDLAK-GGVIPIHTHPAAS-EILLVVHGCITAGFISSSA------------------------NTVYVKTLKKGDIMIFP 143 (210)
Q Consensus 90 v~l~p-gg~~~pH~Hp~a~-Ei~yVl~G~~~v~vv~~~~------------------------~~~~~~~l~~GDv~~~P 143 (210)
+-+.| |+...+|..+..+ -|..+++|+=+..++.|.. .+-+...+++||++++|
T Consensus 178 ~~mGp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIP 257 (392)
T 3pua_A 178 CLICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIP 257 (392)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEeCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeC
Confidence 33444 5568999987654 5778999999888876520 12246699999999999
Q ss_pred CCCeeEEEeCCC
Q 028365 144 QGLLHFQVNSGA 155 (210)
Q Consensus 144 ~g~~H~~~N~g~ 155 (210)
.|..|++.|..+
T Consensus 258 sGWwH~V~nled 269 (392)
T 3pua_A 258 SGWIYATLTPVD 269 (392)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCceEEEecCCC
Confidence 999999999743
No 167
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=92.67 E-value=0.65 Score=39.84 Aligned_cols=56 Identities=23% Similarity=0.377 Sum_probs=41.1
Q ss_pred eEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeE
Q 028365 85 LSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHF 149 (210)
Q Consensus 85 is~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~ 149 (210)
+++.++++.++... ...+...++.|++|++++.. +++.+ .|++||.+++|++...+
T Consensus 251 F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~----~~~~~--~l~~G~~~~vpa~~~~~ 306 (319)
T 1qwr_A 251 FSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKY----EDKTC--PLKKGDHFILPAQMPDF 306 (319)
T ss_dssp CEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEE----TTEEE--EEETTCEEEECTTCCCE
T ss_pred EEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEE----CCEEE--EEcCCcEEEEeCCCceE
Confidence 56777777644322 22356899999999998875 56644 99999999999987443
No 168
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=92.47 E-value=1.9 Score=36.46 Aligned_cols=85 Identities=19% Similarity=0.306 Sum_probs=55.1
Q ss_pred ccCcceEEEEEEEeCCcc---ccceecCCCCEEEEEEe----CEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEe
Q 028365 80 VNGLGLSLARLDLAKGGV---IPIHTHPAASEILLVVH----GCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVN 152 (210)
Q Consensus 80 l~~~gis~~~v~l~pgg~---~~pH~Hp~a~Ei~yVl~----G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N 152 (210)
+..-.+-+..-.+.||+. .|||.|.+..|..|--+ |.+ ++++.+ .++.....++-||++++|...+|. -
T Consensus 175 ~~~~qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gfv-~q~~g~-p~Etrhi~V~n~daVlvP~wh~h~--~ 250 (282)
T 1xru_A 175 LETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACV-FHMMGQ-PQETRHIVMHNEQAVISPSWSIHS--G 250 (282)
T ss_dssp CCCSSCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCCE-EEEEEE-TTEEEEEEECSSEEEEECTTCEEE--E
T ss_pred CchhhEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCEE-EEEeCC-CCCeeEEEEECCCEEEeCCCCCCC--C
Confidence 333345677677888873 79999987777777554 433 333332 345444478999999999656665 4
Q ss_pred CCCCCEEEEEEecCCC
Q 028365 153 SGADGALGFVSFNSPN 168 (210)
Q Consensus 153 ~g~~~a~~~~~f~s~~ 168 (210)
.|.+.-.+|++.-..|
T Consensus 251 ~G~~~Y~ylwvMAG~n 266 (282)
T 1xru_A 251 VGTKAYTFIWGMVGEN 266 (282)
T ss_dssp EESSCCEEEEEEEESC
T ss_pred CCccceEEEEEEEcCC
Confidence 4776766666664333
No 169
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=92.46 E-value=0.91 Score=40.80 Aligned_cols=74 Identities=15% Similarity=0.195 Sum_probs=47.6
Q ss_pred eEEEEEEEe--CCccccceecCCCCEEEEEEeCEEEEEEEecCCCe-EEE-EEEcCCCEEEECCCCeeEEEeC---CCCC
Q 028365 85 LSLARLDLA--KGGVIPIHTHPAASEILLVVHGCITAGFISSSANT-VYV-KTLKKGDIMIFPQGLLHFQVNS---GADG 157 (210)
Q Consensus 85 is~~~v~l~--pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~-~~~-~~l~~GDv~~~P~g~~H~~~N~---g~~~ 157 (210)
+++.++++. ++.....-.+ ....+++|++|++++.. ++. . . ..|++||++++|.+..-.+.+. +.+.
T Consensus 357 F~v~~~~~~~~~~~~~~~~~~-~~~~illv~~G~g~i~~----~~~~~-~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~ 430 (440)
T 1pmi_A 357 FSVLQTIFDKSKGGKQVIEGL-NGPSIVIATNGKGTIQI----TGDDS-TKQKIDTGYVFFVAPGSSIELTADSANQDQD 430 (440)
T ss_dssp CEEEEEECCTTTCCEEEECCC-SSCEEEEEEESEEEEEE----TTCGG-GCEEEETTCEEEECTTCCEEEEECSSCCSSC
T ss_pred EEEEEEEecCCCCceeEEecC-CCcEEEEEEeCeEEEEe----CCccc-ceEEeccCCEEEEeCCCcEEEEEecccCCCc
Confidence 677788887 3422221123 45899999999999876 332 2 1 3899999999999843334443 1445
Q ss_pred EEEEEEe
Q 028365 158 ALGFVSF 164 (210)
Q Consensus 158 a~~~~~f 164 (210)
+.++.+|
T Consensus 431 ~~~~~a~ 437 (440)
T 1pmi_A 431 FTTYRAF 437 (440)
T ss_dssp CEEEEEE
T ss_pred EEEEEEE
Confidence 6666554
No 170
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=92.37 E-value=0.65 Score=39.41 Aligned_cols=70 Identities=19% Similarity=0.367 Sum_probs=51.7
Q ss_pred EEEEEEEeCCccccceecCCCCE-EEEEE-eCEEEEEEEecCCCeEEEEEEcCCCEEEEC--CCCeeEEEeCCCCCEEEE
Q 028365 86 SLARLDLAKGGVIPIHTHPAASE-ILLVV-HGCITAGFISSSANTVYVKTLKKGDIMIFP--QGLLHFQVNSGADGALGF 161 (210)
Q Consensus 86 s~~~v~l~pgg~~~pH~Hp~a~E-i~yVl-~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P--~g~~H~~~N~g~~~a~~~ 161 (210)
-+....+.|+.-+++|-|.+ .| +.||+ +|+++-. |. .|. ...+++||+=.+- +|+.|.-.|..++++..+
T Consensus 41 ~ld~~~~~~~~Gf~~HPHrg-~EtVTyvl~~G~~~H~--DS-~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~l 114 (290)
T 1j1l_A 41 LFDEFKGGRPGGFPDHPHRG-FETVSYLLEGGSMAHE--DF-CGH--TGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGL 114 (290)
T ss_dssp EEEEEEECTTCBEEEEEEBS-EEEEEEECSSSCEEEE--ET-TSC--EEEECTTCEEEEECTTCEEEEEEECSSSCEEEE
T ss_pred EEEccccCCCCCCCCCCCCC-eEEEEEECcceEEEEe--eC-CCC--ceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEE
Confidence 34455677887799999965 77 66999 9998765 44 344 3489999996665 477899988766676665
No 171
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=91.71 E-value=0.35 Score=44.42 Aligned_cols=62 Identities=16% Similarity=0.248 Sum_probs=47.7
Q ss_pred eCCccccceecCCCC-EEEEEEeCEEEEEEEecC------------------------CCeEEEEEEcCCCEEEECCCCe
Q 028365 93 AKGGVIPIHTHPAAS-EILLVVHGCITAGFISSS------------------------ANTVYVKTLKKGDIMIFPQGLL 147 (210)
Q Consensus 93 ~pgg~~~pH~Hp~a~-Ei~yVl~G~~~v~vv~~~------------------------~~~~~~~~l~~GDv~~~P~g~~ 147 (210)
..|+...+|.-+..+ -|.+|++|+=++.++.|. .++.+...+++||.++||.|..
T Consensus 304 ~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~ 383 (528)
T 3pur_A 304 MAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWI 383 (528)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCce
Confidence 445568889887654 577899999888887662 1123456999999999999999
Q ss_pred eEEEeCC
Q 028365 148 HFQVNSG 154 (210)
Q Consensus 148 H~~~N~g 154 (210)
|.+.|..
T Consensus 384 HaV~tle 390 (528)
T 3pur_A 384 HAVLTPV 390 (528)
T ss_dssp EEEEEEE
T ss_pred EEEecCC
Confidence 9999963
No 172
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=91.57 E-value=0.63 Score=33.70 Aligned_cols=55 Identities=20% Similarity=0.139 Sum_probs=41.7
Q ss_pred EEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEe
Q 028365 91 DLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVN 152 (210)
Q Consensus 91 ~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N 152 (210)
.+.||. .+....+.|++-|++|++++.+ .+..-...+++||.|.+|.+.---++-
T Consensus 42 Vm~PGe---Y~F~T~~~E~MevvsG~l~V~L----pG~~eW~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 42 LLHPGV---YTLSSEVAETIRVLSGMAYYHA----EGANDVQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp EECSEE---EEECCSSCEEEEEEEEEEEEEC----TTCSSCEEEETTCEEEECSSSCEEEEE
T ss_pred EEeeeE---EEecCCCcEEEEEEEeEEEEEC----CCCccCEEECCCCEEEECCCCcEEEEE
Confidence 356663 4555567999999999999998 343235699999999999998765553
No 173
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=91.48 E-value=0.87 Score=36.76 Aligned_cols=78 Identities=27% Similarity=0.231 Sum_probs=45.8
Q ss_pred EEEEEEeCCccccceecCCCCEEE---EEEe--CEEEEEEEecCC-----------------CeEEEEEEcCCCEEEECC
Q 028365 87 LARLDLAKGGVIPIHTHPAASEIL---LVVH--GCITAGFISSSA-----------------NTVYVKTLKKGDIMIFPQ 144 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~---yVl~--G~~~v~vv~~~~-----------------~~~~~~~l~~GDv~~~P~ 144 (210)
.-....++|+...+|.|+++ -+. |+-. +.+.+.+.++.. .......-++|++++||+
T Consensus 105 ~W~~~~~~G~~~~~H~H~~~-~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS 183 (216)
T 2rg4_A 105 IWINILPEGGVHGSHIHPHS-VISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWES 183 (216)
T ss_dssp EEEEEECTTCCEEEECCTTC-SEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEET
T ss_pred EEEEEcCCCCcccCccCCCC-eEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECC
Confidence 34456788999999999863 333 3322 122333333310 121234678999999999
Q ss_pred CCeeEEEeCCCCCEEEEEEec
Q 028365 145 GLLHFQVNSGADGALGFVSFN 165 (210)
Q Consensus 145 g~~H~~~N~g~~~a~~~~~f~ 165 (210)
-..|.+.....+.-++-.+||
T Consensus 184 ~l~H~V~p~~~~~~RiSIsFN 204 (216)
T 2rg4_A 184 WLRHEVPMNMAEEDRISVSFN 204 (216)
T ss_dssp TSCEEECCCCSSSCEEEEEEE
T ss_pred CCEEeccCCCCCCCEEEEEEE
Confidence 999998754333333333454
No 174
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=91.42 E-value=0.6 Score=41.33 Aligned_cols=57 Identities=18% Similarity=0.158 Sum_probs=41.4
Q ss_pred ceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeE
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHF 149 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~ 149 (210)
.+++.++++.++.. . ..+ ++..++.|++|++++.. +++.. .|++||++++|++...+
T Consensus 323 ~F~v~~~~l~~~~~-~-~~~-~~~~il~v~~G~~~l~~----~~~~~--~l~~G~~~fvpa~~~~~ 379 (394)
T 2wfp_A 323 DFAFSLHDLALQET-S-IGQ-HSAAILFCVEGEAVLRK----DEQRL--VLKPGESAFIGADESPV 379 (394)
T ss_dssp SCEEEEEECCSSCE-E-ECC-SSCEEEEEEEEEEEEEE----TTEEE--EECTTCEEEECGGGCCE
T ss_pred EEEEEEEEEcCCeE-E-ecC-CCcEEEEEEeceEEEEE----CCeEE--EEccCcEEEEeCCCceE
Confidence 36777787775522 1 233 45799999999998775 55544 99999999999985443
No 175
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=91.23 E-value=1.2 Score=32.97 Aligned_cols=67 Identities=18% Similarity=0.156 Sum_probs=44.4
Q ss_pred ccccceecCCCC--EEEEEEeCEEEEEEEecCCC-e-EEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEec
Q 028365 96 GVIPIHTHPAAS--EILLVVHGCITAGFISSSAN-T-VYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFN 165 (210)
Q Consensus 96 g~~~pH~Hp~a~--Ei~yVl~G~~~v~vv~~~~~-~-~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~ 165 (210)
++...|.- .+- ..+-|++|++++...++.++ . .....+.+|+..++|+...|.++- .+++.+...|-
T Consensus 27 ~l~~~HnT-K~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~--sdD~~f~leFy 97 (119)
T 3dl3_A 27 ALLTHHNT-AVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIEL--SDDAQFNINFW 97 (119)
T ss_dssp HHHSSBCC-CTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEE--CTTCEEEEEEE
T ss_pred HHHhccCC-CCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEE--CCCeEEEEEEE
Confidence 34555543 233 34579999999997664222 1 123489999999999999999993 44555544444
No 176
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=90.45 E-value=2.2 Score=36.21 Aligned_cols=81 Identities=17% Similarity=0.185 Sum_probs=44.5
Q ss_pred ceEEEEEEEeCCcc---ccceecCCCCEEEEEEe----CEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCC
Q 028365 84 GLSLARLDLAKGGV---IPIHTHPAASEILLVVH----GCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD 156 (210)
Q Consensus 84 gis~~~v~l~pgg~---~~pH~Hp~a~Ei~yVl~----G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~ 156 (210)
.+-+..-.+.||+. .|||.|.+..|..|--+ |.+ +.+..+ -++.+...++-||++++|++..|. ..|..
T Consensus 179 qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~v-~h~~g~-pdEtrh~~V~n~daVlvP~wgyHp--~~Gt~ 254 (289)
T 1ywk_A 179 QLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTRI-FHMMGK-PDETKHLVMSNEQAAISPSWSIHS--GVGTS 254 (289)
T ss_dssp SCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCCE-EEEESS-TTSCEEEEECTTEEEEECTTSCCC--EEESS
T ss_pred eEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCeE-EEECCC-CCceEEEEEECCCEEEeCCCcccC--CCCCc
Confidence 45567677888873 79999987777776443 222 222222 244433588999999999998885 24455
Q ss_pred CEEEEEEecCCC
Q 028365 157 GALGFVSFNSPN 168 (210)
Q Consensus 157 ~a~~~~~f~s~~ 168 (210)
.-.+|++.-..|
T Consensus 255 ~Y~ylwvMAG~n 266 (289)
T 1ywk_A 255 NYSFIWAMCGEN 266 (289)
T ss_dssp CCEEEEEEECC-
T ss_pred CeEEEEEEEcCC
Confidence 555666665444
No 177
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=90.30 E-value=5.1 Score=30.84 Aligned_cols=98 Identities=17% Similarity=0.091 Sum_probs=62.6
Q ss_pred ccCCceEEEeeccccCcccCcceEEEEEEEeCCccccceecCCCCEEEEEEeCE-EEEEEEecCCCeEEEEEE----cCC
Q 028365 63 SIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGC-ITAGFISSSANTVYVKTL----KKG 137 (210)
Q Consensus 63 ~~~gg~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~-~~v~vv~~~~~~~~~~~l----~~G 137 (210)
.+.||+.++...+...+-+...-+++ .-+.+|....+|.=.+++|+.+...|. +++.+..+ ++...+..| .+|
T Consensus 19 HPEGG~yrEt~Rs~~~~~R~~~TaIY-fLL~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~-dg~~~~~~LG~d~~~G 96 (154)
T 1znp_A 19 HPEGGFYHQTFRDKAGGERGHSTAIY-YLLEKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQD-GREVQTFTLGPAILEG 96 (154)
T ss_dssp CTTSSEEEEEEECSSSTTTCSCEEEE-EEEESSCCEEEEEETTSCEEEEEEEESCEEEEEESS-SSCCEEEEESSCTTTT
T ss_pred CCCCccEEEEEeCCCCCCCcceeEEE-EEecCCCCCcceeccCCCEEEEeECCCCEEEEEEcC-CCcEEEEEeCCCcccC
Confidence 56899999887765433232222333 335677655555432589999999997 78888776 444334455 457
Q ss_pred CE--EEECCCCeeEEEeCCCCCEEEEEEe
Q 028365 138 DI--MIFPQGLLHFQVNSGADGALGFVSF 164 (210)
Q Consensus 138 Dv--~~~P~g~~H~~~N~g~~~a~~~~~f 164 (210)
+. ++||+|........| .-.++..-
T Consensus 97 e~pQ~vVP~G~WqaA~~~g--~~~LVsCt 123 (154)
T 1znp_A 97 ERPQVIVPANCWQSAESLG--DFTLVGCT 123 (154)
T ss_dssp EESEEEECTTCEEEEEESS--SEEEEEEE
T ss_pred cccEEEEcCCEEEEeeECC--CeEEEEEE
Confidence 76 899999888776553 44455443
No 178
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=90.00 E-value=2.5 Score=34.76 Aligned_cols=68 Identities=13% Similarity=0.021 Sum_probs=47.4
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
..+.+..+.+++|+....-..+...-++||++|++++ +++ .+.+||.+++..+..-.+.+ .+++.++.
T Consensus 158 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v------~g~----~l~~gd~~~~~~~~~l~l~a--~~~a~~Ll 225 (242)
T 1tq5_A 158 QDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTI------NGV----KASTSDGLAIWDEQAISIHA--DSDSEVLL 225 (242)
T ss_dssp SSCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEE------TTE----EEETTCEEEEESCSCEEEEE--SSSEEEEE
T ss_pred CCCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEE------CCE----EeCCCCEEEECCCCeEEEEe--CCCCEEEE
Confidence 4678888999999976544444445779999999765 343 79999999997765434444 24555543
No 179
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=89.70 E-value=1.7 Score=36.89 Aligned_cols=68 Identities=16% Similarity=0.198 Sum_probs=45.1
Q ss_pred ceEEEEEEEeCCccccceecCCCC-EEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 84 GLSLARLDLAKGGVIPIHTHPAAS-EILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 84 gis~~~v~l~pgg~~~pH~Hp~a~-Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
.+++.++++.+.... .. +.. .++.|++| +++.. +++.. .+++||.+++|++...+... | +.+.++.
T Consensus 229 ~F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~----~~~~~--~l~~G~~~~ipa~~~~~~i~-g-~~~~~~~ 295 (300)
T 1zx5_A 229 NFGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILR----GKETA--DLHRGYSCLVPASTDSFTVE-S-ERGKIVR 295 (300)
T ss_dssp SEEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEE----SSSEE--EECTTCEEEECTTCCEEEEE-E-EEEEEEE
T ss_pred eEEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEe----CCeEE--EEccceEEEEeCCCceEEEE-e-CceEEEE
Confidence 367777777642222 33 567 99999999 88875 45544 89999999999987554432 2 1345544
Q ss_pred Ee
Q 028365 163 SF 164 (210)
Q Consensus 163 ~f 164 (210)
++
T Consensus 296 a~ 297 (300)
T 1zx5_A 296 IY 297 (300)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 180
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=88.71 E-value=3.4 Score=34.28 Aligned_cols=71 Identities=18% Similarity=0.106 Sum_probs=47.7
Q ss_pred cceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 83 LGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 83 ~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
..+.+..+.+++|.....-..+.. -++||++|++++.= . ++. ...|.+||.+++..+..=.+.. .+++.++
T Consensus 180 ~~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v~v~g--~-~~~--~~~l~~gd~~~l~~~~~l~l~a--~~~a~~L 250 (256)
T 2vec_A 180 QQVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKFHALT--H-HEE--KAALTCGDGAFIRDEANITLVA--DSPLRAL 250 (256)
T ss_dssp SSCEEEEEEECTTCEEEEECSSSE-EEEEEEESCEEEEE--T-TEE--EEEECTTCEEEEESCSEEEEEE--SSSEEEE
T ss_pred CCcEEEEEEECCCCEEEEecCCCe-EEEEEEECEEEECC--c-ccc--ceEECCCCEEEECCCCeEEEEe--CCCCEEE
Confidence 457888899999997765555443 78999999987751 1 122 2379999999997665333444 2445444
No 181
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=88.58 E-value=4.2 Score=34.08 Aligned_cols=56 Identities=11% Similarity=0.151 Sum_probs=41.8
Q ss_pred CcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECC-C
Q 028365 82 GLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQ-G 145 (210)
Q Consensus 82 ~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~-g 145 (210)
...+.+..+.+++|+.......+...-++||++|++++ ++. ...+.+||.+++.. +
T Consensus 164 ~~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v------~g~--~~~l~~~d~~~~~~~~ 220 (277)
T 2p17_A 164 IVPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVF------GAD--NIEGKAGQALFFSRHN 220 (277)
T ss_dssp SSCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEE------TTT--TEEEETTEEEEECCCC
T ss_pred CCCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEE------CCC--ceEeCCCcEEEEcCCC
Confidence 34688899999999977655544446799999999755 331 12799999999986 5
No 182
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=88.28 E-value=4.5 Score=34.14 Aligned_cols=75 Identities=8% Similarity=0.046 Sum_probs=48.5
Q ss_pred CcceEEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 82 GLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 82 ~~gis~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
...+.+..+.+++|+.......+...-++||++|++.+. +++ ....+.++.++++..|..=.+.+...+++.++
T Consensus 166 ~~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~-----g~~-~~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~L 239 (290)
T 1j1l_A 166 RTPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG-----PDD-AQQKIEPHHTAVLGEGDSVQVENKDPKRSHFV 239 (290)
T ss_dssp SSCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES-----CTT-SCEEECTTEEEEECSCSEEEEECCSSSCEEEE
T ss_pred cCCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC-----Ccc-cceeccCceEEEecCCCEEEEEEcCCCCcEEE
Confidence 346788889999999775555444467899999998763 210 01256666677776665545555445566665
Q ss_pred E
Q 028365 162 V 162 (210)
Q Consensus 162 ~ 162 (210)
.
T Consensus 240 L 240 (290)
T 1j1l_A 240 L 240 (290)
T ss_dssp E
T ss_pred E
Confidence 4
No 183
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=87.57 E-value=2.1 Score=36.66 Aligned_cols=21 Identities=33% Similarity=0.510 Sum_probs=18.6
Q ss_pred EEEEcCCCEEEECCCCeeEEE
Q 028365 131 VKTLKKGDIMIFPQGLLHFQV 151 (210)
Q Consensus 131 ~~~l~~GDv~~~P~g~~H~~~ 151 (210)
...+++||.+++|+|.+|...
T Consensus 159 ~v~l~pGd~~~ipaGt~HA~~ 179 (319)
T 1qwr_A 159 RIKIKPGDFYYVPSGTLHALC 179 (319)
T ss_dssp EEECCTTCEEEECTTCCEEEC
T ss_pred EEEcCCCCEEEcCCCCceEec
Confidence 449999999999999999763
No 184
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=86.79 E-value=9 Score=32.09 Aligned_cols=70 Identities=14% Similarity=0.152 Sum_probs=49.6
Q ss_pred eEEEEEEEeCCccccceecCCCCEEEE-EEeCEEEEEEEecCCCeEEEEEEcC--------CCEEEECCCCeeEEEeCCC
Q 028365 85 LSLARLDLAKGGVIPIHTHPAASEILL-VVHGCITAGFISSSANTVYVKTLKK--------GDIMIFPQGLLHFQVNSGA 155 (210)
Q Consensus 85 is~~~v~l~pgg~~~pH~Hp~a~Ei~y-Vl~G~~~v~vv~~~~~~~~~~~l~~--------GDv~~~P~g~~H~~~N~g~ 155 (210)
+.+..++|++|.......-. .|+.+ .+.|++.+.+ +++.+...-.. .|++++|+|.--.+...+
T Consensus 29 ~~f~~~~L~~Ge~~~~~~~~--~E~~iv~l~G~~~V~~----~g~~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~- 101 (270)
T 2qjv_A 29 VGFDVWQLXAGESITLPSDE--RERCLVLVAGLASVXA----ADSFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAET- 101 (270)
T ss_dssp CEEEEEEECTTCEEEECCSS--EEEEEEEEESCEEEEE----TTEEEEEECCCSSGGGCSCCCEEEECSSCCEEEEESS-
T ss_pred eEEEEEEecCCCEEEecCCC--cEEEEEEecceEEEEE----CCEEEeccccccccccCCCCcEEEECCCCEEEEEecC-
Confidence 67888899999988776663 46655 6799999998 78866222233 599999999955555543
Q ss_pred CCEEEEE
Q 028365 156 DGALGFV 162 (210)
Q Consensus 156 ~~a~~~~ 162 (210)
++.+..
T Consensus 102 -~~~~~v 107 (270)
T 2qjv_A 102 -DLELAV 107 (270)
T ss_dssp -SEEEEE
T ss_pred -CceEEE
Confidence 566553
No 185
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=86.19 E-value=1.8 Score=30.98 Aligned_cols=53 Identities=11% Similarity=0.244 Sum_probs=36.8
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
+....+++|..+-. -...+..+.+|++|.+++...++++.+.....+.+||++
T Consensus 28 ~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 28 MSEVTLARGDTLFH-EGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELI 80 (149)
T ss_dssp CEEEEECTTCEEEC-TTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEE
T ss_pred ceEEEeCCCCEEEC-CCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEe
Confidence 34567788876422 122346799999999999887663445556689999986
No 186
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=85.32 E-value=13 Score=29.82 Aligned_cols=131 Identities=11% Similarity=0.081 Sum_probs=73.3
Q ss_pred ccCCceEEEeecccc----Cc--cc--------Ccce-EEEEEEEeCCc-cccceecCCCCEEEEEEeCEEEEEEEecCC
Q 028365 63 SIINAAVTPAFVAQF----PA--VN--------GLGL-SLARLDLAKGG-VIPIHTHPAASEILLVVHGCITAGFISSSA 126 (210)
Q Consensus 63 ~~~gg~~~~~~~~~~----P~--l~--------~~gi-s~~~v~l~pgg-~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~ 126 (210)
.+.||+.++...... +. +. .... +.-..-|.++. ...+|.- +++|+.+...|.....++.+ +
T Consensus 42 HPEGG~yrET~Rs~~~~~~~~~~~~~~~~~~~~~R~~~TaIYfLL~~~~~~S~wHRv-~sdEiW~~h~G~p~~~li~~-d 119 (203)
T 1xe7_A 42 HREGGYFKETDRSPYTMEVEKPVNGGSGNTEMVTRNQSTLIYYLLTPDSPIGKFHKN-INRIIHILQRGKGQYVLVYP-D 119 (203)
T ss_dssp CTTSSEEEEEEECSCEEEECCCC--------CEEEESCEEEEEEEBTTBCEEEEEEE-SSCEEEEEEEECEEEEEECT-T
T ss_pred CCCCceEEEEEecccccccCccccccccccCCCCccceeEEEEEEcCCCCcccceee-CCCEEEEEEcCCccEEEEcC-C
Confidence 578999998776532 11 00 1111 22223466665 4555555 58999999999666566776 5
Q ss_pred CeEEEEEEcC----CCE--EEECCCCeeEEEeC-CCCC--EEEEEEecCCCCCceechHhHHhhcCCHH-HHHHhcCCCH
Q 028365 127 NTVYVKTLKK----GDI--MIFPQGLLHFQVNS-GADG--ALGFVSFNSPNPGLQITDFALFANNLSSQ-LVEQTTFLDD 196 (210)
Q Consensus 127 ~~~~~~~l~~----GDv--~~~P~g~~H~~~N~-g~~~--a~~~~~f~s~~pg~~~i~~~~f~s~~p~~-vla~~f~~~~ 196 (210)
++..+..|.+ |+. ++||+|........ +.+. -.++..-- .||+..-. |. ..+.+ -|.+.|. +
T Consensus 120 g~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~~~~~~tLVgCtV--aPGFdF~d---Fe-l~~~~~~L~~~~P--~ 191 (203)
T 1xe7_A 120 GQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEEFDNGFLISEVV--VPGFDFED---HT-FLKGEDELKHLVG--P 191 (203)
T ss_dssp SCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCTTTTTCEEEEEEE--SSCCCGGG---EE-ECCHHHHHHHHHC--H
T ss_pred CCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCCCCcccceEEEEEe--cCCccchh---cE-ecCCcHHHHHHCC--H
Confidence 6544455554 665 89999988877654 2222 24554433 35554211 22 13444 4444443 5
Q ss_pred HHHHHHh
Q 028365 197 ATVKRLK 203 (210)
Q Consensus 197 ~~v~~l~ 203 (210)
+.++.|+
T Consensus 192 ~~~~~l~ 198 (203)
T 1xe7_A 192 EKAAELA 198 (203)
T ss_dssp HHHHHTG
T ss_pred HHHHHHH
Confidence 5666554
No 187
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=83.41 E-value=3.4 Score=31.71 Aligned_cols=53 Identities=15% Similarity=0.092 Sum_probs=37.4
Q ss_pred EEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEE
Q 028365 88 ARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMI 141 (210)
Q Consensus 88 ~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~ 141 (210)
....+++|..+-. -......+.+|++|.+++...++++.+.....+.+||++=
T Consensus 23 ~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 75 (216)
T 4ev0_A 23 QRRLYPQGKPIFY-QGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFG 75 (216)
T ss_dssp EEEEECTTCEEEC-TTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEEC
T ss_pred eEEEeCCCCEEEe-CCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 4466777775432 2223578999999999999876634455566899999873
No 188
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=82.81 E-value=3.7 Score=32.10 Aligned_cols=52 Identities=13% Similarity=0.274 Sum_probs=37.1
Q ss_pred EEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 88 ARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 88 ~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
....+++|..+-. -......+.+|++|.+.+...++++.+.....+.+||++
T Consensus 35 ~~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 35 VWRSYDRGETLFL-QEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESF 86 (237)
T ss_dssp EEEEECTTCEEEC-TTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEE
T ss_pred EEEEECCCCEEEc-CCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 4566777775422 222357899999999999987763445556689999987
No 189
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=82.75 E-value=4.3 Score=30.90 Aligned_cols=53 Identities=11% Similarity=0.184 Sum_probs=36.8
Q ss_pred EEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEE
Q 028365 88 ARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMI 141 (210)
Q Consensus 88 ~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~ 141 (210)
....+++|..+-.. ......+.+|++|.+++...++++.+.....+.+||++=
T Consensus 20 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQ-GEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 72 (210)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred EEEEeCCCCEEECC-CCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 34567777754222 223578999999999999877634444556889999973
No 190
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=82.72 E-value=1.3 Score=39.11 Aligned_cols=38 Identities=18% Similarity=0.093 Sum_probs=28.4
Q ss_pred EEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEEecC
Q 028365 129 VYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNS 166 (210)
Q Consensus 129 ~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s 166 (210)
.++..-++||.++||+|.+|.+.|..+.-.+..-.++.
T Consensus 292 ~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~sp 329 (392)
T 2ypd_A 292 TCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSP 329 (392)
T ss_dssp CEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCG
T ss_pred eEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcCh
Confidence 35668899999999999999999987543333333343
No 191
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=82.23 E-value=4 Score=31.05 Aligned_cols=53 Identities=9% Similarity=0.111 Sum_probs=37.1
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
+....+++|..+-. --..+..+.+|++|.+++...++++.+.....+.+||++
T Consensus 62 ~~~~~~~~ge~i~~-~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLT-EGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEEC-TTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEc-CCCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 44567778775422 223457899999999999987763334455689999986
No 192
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=82.03 E-value=4.2 Score=31.49 Aligned_cols=53 Identities=9% Similarity=0.089 Sum_probs=37.6
Q ss_pred EEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEE
Q 028365 88 ARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMI 141 (210)
Q Consensus 88 ~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~ 141 (210)
....+++|..+-. -......+.+|++|.+.+...++++.+.....+.+||++=
T Consensus 35 ~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 35 HRRRYPTRTDVFR-PGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp EEEEECTTCEEEC-TTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEEC-CCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 4566777775422 2223578999999999999877744455566899999974
No 193
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=81.79 E-value=4.7 Score=31.22 Aligned_cols=51 Identities=10% Similarity=0.295 Sum_probs=36.3
Q ss_pred EEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 89 RLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 89 ~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
...+++|..+-. -...+..+.+|++|.+.+...++++.+.....+.+||++
T Consensus 31 ~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 81 (227)
T 3d0s_A 31 PVDFPRGHTVFA-EGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMF 81 (227)
T ss_dssp EEEECTTCEEEC-TTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred EEEeCCCCEEEc-CCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEE
Confidence 466777775422 222357899999999999987763445556689999987
No 194
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=81.57 E-value=6.2 Score=29.67 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=37.4
Q ss_pred EEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEE
Q 028365 88 ARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMI 141 (210)
Q Consensus 88 ~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~ 141 (210)
....+++|..+- +-...+..+.+|++|.+++...++++.+.....+.+||++-
T Consensus 31 ~~~~~~~g~~l~-~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 31 QLKKVRKKETLL-KTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp EEEEECTTCEEE-CTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred EEEEEcCCCEEE-CCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 356677777532 22233578999999999999887634455556789999985
No 195
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=81.49 E-value=3.7 Score=31.20 Aligned_cols=50 Identities=12% Similarity=0.160 Sum_probs=33.6
Q ss_pred EEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEE
Q 028365 91 DLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMI 141 (210)
Q Consensus 91 ~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~ 141 (210)
.+++|..+-. -...+..+.+|++|.+.+...++++.+.....+.+||++=
T Consensus 3 ~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 52 (195)
T 3b02_A 3 RFARKETIYL-RGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFG 52 (195)
T ss_dssp EECTTCEEEC-TTSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred EcCCCCEEEC-CCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEec
Confidence 3455554321 1223468999999999998877634455566899999873
No 196
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=80.61 E-value=3.3 Score=29.27 Aligned_cols=54 Identities=19% Similarity=0.287 Sum_probs=32.9
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEE---EEEEcCCCEEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVY---VKTLKKGDIMI 141 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~---~~~l~~GDv~~ 141 (210)
+....+++|..+- +-...+..+.+|++|.+++...++++.+.. ...+.+||++=
T Consensus 29 ~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIF-KENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEE-CTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEE-eCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 4556777877532 223335799999999999986555222333 45789999873
No 197
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=80.49 E-value=3.9 Score=31.80 Aligned_cols=53 Identities=8% Similarity=0.169 Sum_probs=37.0
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
+....+++|..+-.- -.....+.+|++|.+.+...++++.+.....+.+||++
T Consensus 29 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 81 (231)
T 3e97_A 29 VTERNFQPDELVVEQ-DAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVV 81 (231)
T ss_dssp EEEEEECTTCBCCCT-TCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEE
T ss_pred cEEEEECCCCEEEeC-CCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEE
Confidence 445677888764332 22357899999999999987763444556689999986
No 198
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=80.25 E-value=5.8 Score=30.37 Aligned_cols=52 Identities=19% Similarity=0.240 Sum_probs=37.1
Q ss_pred EEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 88 ARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 88 ~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
....+++|..+-.. ......+.+|++|.+.+...++++.+.....+.+||++
T Consensus 27 ~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 78 (220)
T 3dv8_A 27 ITQHVKKGTIIHNG-NMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMC 78 (220)
T ss_dssp EEEEECTTCEEEEG-GGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred ceEEeCCCCEEECC-CCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCee
Confidence 45677787754322 22357899999999999987763445555688999996
No 199
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=79.90 E-value=7.9 Score=32.76 Aligned_cols=66 Identities=14% Similarity=0.080 Sum_probs=43.2
Q ss_pred EEEeCCccccceecCCCCEEEE-EEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEe-CC-CCCEEEE
Q 028365 90 LDLAKGGVIPIHTHPAASEILL-VVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVN-SG-ADGALGF 161 (210)
Q Consensus 90 v~l~pgg~~~pH~Hp~a~Ei~y-Vl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N-~g-~~~a~~~ 161 (210)
++|+.+....-.+--...|+.+ .+.|.+.+.+ +++.+ .|..-|.+++|+|.--.... .+ .+++.+.
T Consensus 62 l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~v----dg~~f--~lg~~dalYVp~G~~~v~~as~d~~~~a~fa 130 (289)
T 1ywk_A 62 LEIILDKELGVDYFLERRELGVINIGGPGFIEI----DGAKE--TMKKQDGYYIGKETKHVRFSSENPDNPAKFY 130 (289)
T ss_dssp EECCCSGGGTSSSTTTTEEEEEEECSSCEEEEE----TTEEE--EECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred EEcCCCceecccccCCCcEEEEEEccCeEEEEE----CCEEE--ecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 4555555443332223467776 5688999998 88877 99999999999997643433 22 3455554
No 200
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=79.72 E-value=7.7 Score=29.36 Aligned_cols=53 Identities=13% Similarity=0.223 Sum_probs=36.9
Q ss_pred EEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEE
Q 028365 88 ARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMI 141 (210)
Q Consensus 88 ~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~ 141 (210)
....+++|..+- +-......+.+|++|.+++...++++.+.....+.+||++=
T Consensus 14 ~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 14 HRRRYTAKSTII-YAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFG 66 (207)
T ss_dssp EEEEECTTCEEE-CTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEES
T ss_pred ceEEECCCCEEE-cCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcc
Confidence 345677777542 22233578999999999999877634455566899999873
No 201
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=79.48 E-value=1.7 Score=31.43 Aligned_cols=53 Identities=11% Similarity=0.258 Sum_probs=33.9
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
+....+++|..+-.--. .+..+.+|++|.+++...++++.+.....+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGE-PAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCC-ccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 44567788876432222 357899999999999865542333345588999986
No 202
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=79.33 E-value=3.5 Score=32.39 Aligned_cols=53 Identities=9% Similarity=0.131 Sum_probs=37.6
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
+....+++|..+-. --..+..+.+|++|.+++...++++.+.....+.+||++
T Consensus 43 ~~~~~~~~ge~i~~-~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~f 95 (232)
T 1zyb_A 43 LHFIKHKAGETIIK-SGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLI 95 (232)
T ss_dssp CEEEEECTTCEEEC-TTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEE
T ss_pred cEEEEECCCCEEEC-CCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCee
Confidence 45667788876432 222357899999999999877663445555688999986
No 203
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=79.26 E-value=11 Score=29.06 Aligned_cols=69 Identities=13% Similarity=0.115 Sum_probs=43.2
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
+....+++|..+-. -...+..+.+|++|.+.+. .++++.+.....+.+||++= ....+.+... +++.++
T Consensus 23 ~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~--~~~~v~ 91 (222)
T 1ft9_A 23 FRSKIHAKGSLVCT-GEGDENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC--MHSGCLVEAT--ERTEVR 91 (222)
T ss_dssp CEEEEECTTCEEEC-TTCCCCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE--SCSSCEEEES--SCEEEE
T ss_pred CcEEEECCCCEEEC-CCCCCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec--CCCCEEEEEc--cceEEE
Confidence 34567778775432 2223578999999999996 55523344456899999987 3344455553 345444
No 204
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=79.22 E-value=6 Score=31.71 Aligned_cols=53 Identities=11% Similarity=0.177 Sum_probs=37.5
Q ss_pred EEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEE
Q 028365 88 ARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMI 141 (210)
Q Consensus 88 ~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~ 141 (210)
....+++|..+-. --.....+.+|++|.+++...++++.+.....+.+||++=
T Consensus 70 ~~~~~~~ge~i~~-~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~G 122 (260)
T 3kcc_A 70 HIHKYPSKSTLIH-QGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 122 (260)
T ss_dssp EEEEECTTCEEEC-TTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred EEEEECCCCEEEC-CCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEe
Confidence 4567788875422 1223578999999999999877634455566899999873
No 205
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=78.46 E-value=4 Score=31.55 Aligned_cols=53 Identities=15% Similarity=0.348 Sum_probs=37.0
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
+....+++|..+-.. ...+..+.+|++|.+++...++++.+.....+.+||++
T Consensus 22 ~~~~~~~~g~~i~~~-G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 22 GKVIVFRKGEIVKHQ-DDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQII 74 (213)
T ss_dssp SEEEEECTTCEEECT-TCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEES
T ss_pred cEEEEECCCCEEEcC-CCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEe
Confidence 345667788754322 22347899999999999887763444555689999986
No 206
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=78.39 E-value=3.3 Score=32.31 Aligned_cols=53 Identities=9% Similarity=0.087 Sum_probs=34.2
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
+....+++|..+-. -......+.+|++|.+.+...++++.+.....+.+||++
T Consensus 33 ~~~~~~~~g~~i~~-~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 85 (232)
T 2gau_A 33 IQPFPCKKASTVFS-EGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFF 85 (232)
T ss_dssp CEEEEECTTCEEEC-TTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEE
T ss_pred CeEEEECCCCEEEe-CCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 44567788875432 222357899999999999876653444455689999986
No 207
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=77.64 E-value=6.2 Score=31.21 Aligned_cols=54 Identities=15% Similarity=0.177 Sum_probs=37.7
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMI 141 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~ 141 (210)
+....+++|..+-.- -..+..+.+|++|.+++...++++.+.....+.+||++-
T Consensus 32 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 85 (250)
T 3e6c_C 32 GLIRDFAKGSAVIMP-GEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIG 85 (250)
T ss_dssp SEEEEECTTCEEECT-TCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CeEEEECCCCEEECC-CCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 345667777754322 223578999999999999877634455566899999874
No 208
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=77.27 E-value=16 Score=27.96 Aligned_cols=69 Identities=13% Similarity=0.170 Sum_probs=43.5
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGF 161 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~ 161 (210)
+....+++|..+-. --..+..+.+|++|.+.+. .++++.+.....+.+||++=.| ..+.+... +++.++
T Consensus 27 ~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~~G~~--~~~~~~A~--~~~~v~ 95 (220)
T 2fmy_A 27 FREQRYSKKAILYT-PNTERNLVFLVKSGRVRVY-LAYEDKEFTLAILEAGDIFCTH--TRAFIQAM--EDTTIL 95 (220)
T ss_dssp SEEEEECTTCEEEC-TTCSSCEEEEEEESEEEEE-EECSSCEEEEEEEETTCEEESC--SSSEEEES--SSEEEE
T ss_pred hheeEeCCCCEEEC-CCCCCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEeCCc--cceEEEEc--CcEEEE
Confidence 34567788876432 2223578999999999994 5553444555689999998662 33444443 445444
No 209
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=76.90 E-value=9.8 Score=27.68 Aligned_cols=52 Identities=6% Similarity=0.041 Sum_probs=35.1
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
+....+.+|..+- +-...+..+.+|++|.+++.. +.++.+.....+.+||++
T Consensus 61 ~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVI-DQGDDGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEE-CTTSCCCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEE-eCCCCCcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEe
Confidence 3446677777532 233346789999999999987 542334455578999965
No 210
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=76.88 E-value=6.6 Score=29.85 Aligned_cols=71 Identities=14% Similarity=0.127 Sum_probs=43.0
Q ss_pred EEEeCCccccceecCCC--CEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEE----CCCCeeEEEeCCCCCEEEEEE
Q 028365 90 LDLAKGGVIPIHTHPAA--SEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIF----PQGLLHFQVNSGADGALGFVS 163 (210)
Q Consensus 90 v~l~pgg~~~pH~Hp~a--~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~----P~g~~H~~~N~g~~~a~~~~~ 163 (210)
..+++|..+-.. .... ..+.+|++|.+.+...++++.+.....+.+||++=. .....+.... -+++.++..
T Consensus 8 ~~~~~g~~i~~~-g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A--~~~~~v~~i 84 (202)
T 2zcw_A 8 VSFKAGDVILYP-GVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEA--ATDVRLEPL 84 (202)
T ss_dssp EEECTTCEEECS-BSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEE--SSCEEEEEC
T ss_pred EEECCCCEEECC-CCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEE--cccEEEEEE
Confidence 456777654221 2234 578999999999988776344555668999998743 1222334444 345555544
No 211
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=75.89 E-value=8.9 Score=30.04 Aligned_cols=70 Identities=13% Similarity=0.120 Sum_probs=42.2
Q ss_pred EEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECC----CC---eeEEEeCCCCCEEEE
Q 028365 89 RLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQ----GL---LHFQVNSGADGALGF 161 (210)
Q Consensus 89 ~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~----g~---~H~~~N~g~~~a~~~ 161 (210)
...+++|..+- +--..+..+.+|++|.+++...++++.+.....+ +||++-... .. .+...... +++.++
T Consensus 20 ~~~~~~ge~i~-~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~v~ 96 (238)
T 2bgc_A 20 PKQFHKKELIF-NQWDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQATAY 96 (238)
T ss_dssp CEEEETTCEEE-CTTCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEEEE
T ss_pred EEEECCCCEEE-eCCCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceEEE
Confidence 35677777542 2222357899999999999987763334444456 999875432 21 34555443 455554
No 212
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=74.02 E-value=12 Score=29.46 Aligned_cols=54 Identities=9% Similarity=0.222 Sum_probs=38.6
Q ss_pred EEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 86 SLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 86 s~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
.+....+++|..+-. --..+..+.+|++|.+++...++++.+.....+.+||++
T Consensus 42 ~~~~~~~~~ge~i~~-~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~ 95 (243)
T 3la7_A 42 PPVVETFERNKTIFF-PGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVF 95 (243)
T ss_dssp CCEEEEECTTCEEEC-TTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEE
T ss_pred hheeEEECCCCEEEc-CCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEE
Confidence 344677888886432 222357899999999999987774445556689999986
No 213
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=73.32 E-value=2.5 Score=35.80 Aligned_cols=45 Identities=18% Similarity=0.175 Sum_probs=33.0
Q ss_pred CEEEEEEeC-EEEEEEEecC----------CCe------EEEEEEcCCCEEEECCCCeeEEE
Q 028365 107 SEILLVVHG-CITAGFISSS----------ANT------VYVKTLKKGDIMIFPQGLLHFQV 151 (210)
Q Consensus 107 ~Ei~yVl~G-~~~v~vv~~~----------~~~------~~~~~l~~GDv~~~P~g~~H~~~ 151 (210)
+|+.|+++- ++..++.... +++ .....+++||.+++|+|.+|..-
T Consensus 118 pE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 118 ESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp CEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEE
T ss_pred cEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcC
Confidence 799999984 5666653220 122 34568999999999999999764
No 214
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=66.68 E-value=14 Score=31.21 Aligned_cols=50 Identities=14% Similarity=0.130 Sum_probs=36.3
Q ss_pred CCEEEE-EEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEEe-C-CCCCEEEE
Q 028365 106 ASEILL-VVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVN-S-GADGALGF 161 (210)
Q Consensus 106 a~Ei~y-Vl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~N-~-g~~~a~~~ 161 (210)
..|+.+ .+.|.+.+.+ +++.+ .|..-|.+++|+|.-..... . ...++.+.
T Consensus 78 ~rE~~iV~l~G~~~V~v----dG~~f--~lg~~dalYVp~g~~~v~~as~da~~~a~fa 130 (282)
T 1xru_A 78 RRELGVINIGGAGTITV----DGQCY--EIGHRDALYVGKGAKEVVFASIDTGTPAKFY 130 (282)
T ss_dssp TEEEEEEECSSCEEEEE----TTEEE--EECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred CcEEEEEEccCeEEEEE----CCEEE--ecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 367765 5688999998 88877 99999999999998643433 2 23356554
No 215
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=65.16 E-value=19 Score=25.84 Aligned_cols=48 Identities=8% Similarity=0.192 Sum_probs=33.8
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
+....+.+|..+- +-...+..+.+|++|.+++.. +++. ...+.+||++
T Consensus 61 ~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~----~~~~-~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVI-QQGDEGDNFYVIDQGEMDVYV----NNEW-ATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEE-CTTSCCCEEEEEEESCEEEEE----TTEE-EEEECTTCEE
T ss_pred ceEEEECCCCEEE-eCCCCCCeEEEEEecEEEEEE----CCEE-EEEecCCCEe
Confidence 3456778877542 223345789999999999986 4553 3479999986
No 216
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=64.94 E-value=4.6 Score=35.56 Aligned_cols=22 Identities=23% Similarity=0.241 Sum_probs=19.1
Q ss_pred EEEEEcCCCEEEECCCCeeEEE
Q 028365 130 YVKTLKKGDIMIFPQGLLHFQV 151 (210)
Q Consensus 130 ~~~~l~~GDv~~~P~g~~H~~~ 151 (210)
....|++||.+++|+|.+|..-
T Consensus 240 n~v~l~pGd~~fipAG~~HAy~ 261 (394)
T 2wfp_A 240 NVVKLNPGEAMFLFAETPHAYL 261 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEE
T ss_pred eEEECCCCCEEEcCCCCceEcC
Confidence 3558999999999999999764
No 217
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=63.09 E-value=28 Score=26.87 Aligned_cols=67 Identities=7% Similarity=0.089 Sum_probs=46.8
Q ss_pred cccceecCCCCEEEEEEeCEEEEEEEecCCC-----eEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEEE
Q 028365 97 VIPIHTHPAASEILLVVHGCITAGFISSSAN-----TVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVS 163 (210)
Q Consensus 97 ~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~-----~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~~ 163 (210)
+..+=.||..+|.+.-+.|...+-+|.+.++ +.......+|+.+.+-+|+.|...-.-.++..++.+
T Consensus 68 v~~lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~~F~vv 139 (168)
T 1xsq_A 68 IHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTI 139 (168)
T ss_dssp EEEEEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSSCEEEEEE
T ss_pred eeEEeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCCcceEEEE
Confidence 3456678888999999999876555554221 334558999999999999999854333445555533
No 218
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=62.92 E-value=12 Score=28.59 Aligned_cols=48 Identities=17% Similarity=0.227 Sum_probs=33.1
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
+....+.||..+-..-. .+.++.+|++|.+.+.. + +++.. .+.+||++
T Consensus 95 ~~~~~~~~ge~I~~~g~-~~~~ly~I~~G~v~v~~--~-~g~~~--~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGT-IGKKMYFIQHGVVSVLT--K-GNKEM--KLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEECEEEEEC--T-TSCCE--EEETTCEE
T ss_pred CCceEECCCCEEEECCC-cCCeEEEEeccEEEEEE--C-CCeEE--EEcCCCEe
Confidence 44567788886432222 35789999999998853 3 55544 79999987
No 219
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=61.97 E-value=34 Score=26.56 Aligned_cols=66 Identities=15% Similarity=0.111 Sum_probs=46.1
Q ss_pred cccceecCCCCEEEEEEeCEEEEEEEecCCC-----eEEEEEEcCCCEEEECCCCeeEEEeCCCCCEEEEE
Q 028365 97 VIPIHTHPAASEILLVVHGCITAGFISSSAN-----TVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFV 162 (210)
Q Consensus 97 ~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~-----~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~~~~ 162 (210)
+..+=.||..+|.+.-+.|.-.+-+|.+.++ +.......+|+.+.+-+|+.|...-.-+++..++.
T Consensus 70 v~~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~dF~v 140 (175)
T 2bdr_A 70 VRMLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEKRDDFLV 140 (175)
T ss_dssp ECEEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSSEEEEEE
T ss_pred eeEEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCCCceEEE
Confidence 3456678889999999999876666655221 23344999999999999999965433334444443
No 220
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=61.62 E-value=7.8 Score=33.45 Aligned_cols=31 Identities=23% Similarity=0.408 Sum_probs=25.9
Q ss_pred EEEEEEcCCCEEEECCCCeeEEEeCCCCCEE
Q 028365 129 VYVKTLKKGDIMIFPQGLLHFQVNSGADGAL 159 (210)
Q Consensus 129 ~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~ 159 (210)
.++.+=+|||.+++++|..|+.+|.|-.-.+
T Consensus 278 vyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~ 308 (332)
T 2xxz_A 278 VYRFVQRPGDLVWINAGTVHWVQATGWCNNI 308 (332)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecceeeEE
Confidence 3466889999999999999999999864443
No 221
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=60.79 E-value=14 Score=27.96 Aligned_cols=49 Identities=10% Similarity=0.153 Sum_probs=34.3
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
+....+.||..+-. -...+..+.+|++|++.+.. + +|+ ....+.+||++
T Consensus 94 ~~~~~~~~ge~I~~-~G~~~~~ly~I~~G~v~~~~--~-~g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQ-EGTFGDRMFFIQQGIVDIIM--S-DGV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEEC-TTSCCSEEEEEEECCEEEEC--T-TSC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEE-CCCcCcEEEEEEeCEEEEEe--c-CCe-EEEEecCCCEe
Confidence 45567788875432 22235789999999998875 3 454 45689999986
No 222
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=60.06 E-value=27 Score=27.88 Aligned_cols=53 Identities=19% Similarity=0.264 Sum_probs=36.3
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCC-eEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAN-TVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~-~~~~~~l~~GDv~ 140 (210)
+....+.+|..+-.. ...+..+.+|++|++.+.....+++ ......+.+||++
T Consensus 180 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQ-GEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeC-CccCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 445677777754332 3345789999999999987554232 3456689999987
No 223
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=58.58 E-value=40 Score=23.48 Aligned_cols=47 Identities=13% Similarity=0.164 Sum_probs=32.5
Q ss_pred EEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 88 ARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 88 ~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
....+.+|..+-. -...+..+.+|++|.+++.. +++ ....+.+||++
T Consensus 47 ~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~----~g~-~~~~~~~G~~f 93 (139)
T 3ocp_A 47 YPVEYGKDSCIIK-EGDVGSLVYVMEDGKVEVTK----EGV-KLCTMGPGKVF 93 (139)
T ss_dssp EEEEECSSCEEEC-TTSCCCEEEEEEECCEEEEE----TTE-EEEEECTTCEE
T ss_pred EEEecCCCCEEEe-CCCcCCEEEEEEeCEEEEEE----CCE-EEEEeCCCCEe
Confidence 4466777775322 23345789999999999854 454 34688999986
No 224
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=57.83 E-value=16 Score=30.08 Aligned_cols=51 Identities=20% Similarity=0.275 Sum_probs=36.1
Q ss_pred EEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 88 ARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 88 ~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
....+++|..+- +--.....+.+|++|.+++...++ +++.....+.+||++
T Consensus 37 ~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~~~-~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 37 QPLRAAAGQVLL-RQGEPAVSFLLISSGSAEVSHVGD-DGVAIIARALPGMIV 87 (333)
T ss_dssp EEEEECTTCEEE-CTTSBCCCEEEEEECCEEEEEECT-TCCEEEEEECTTCEE
T ss_pred eEEEECCCCEEE-eCCCcCCEEEEEEeeEEEEEEECC-CCcEEEEEecCCCEe
Confidence 456677777432 222235689999999999988776 455466789999987
No 225
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=56.23 E-value=3.2 Score=32.07 Aligned_cols=53 Identities=11% Similarity=0.258 Sum_probs=35.2
Q ss_pred EEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEE
Q 028365 88 ARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMI 141 (210)
Q Consensus 88 ~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~ 141 (210)
....+++|..+-.. ......+.+|++|.+.+...++++.+.....+.+||++-
T Consensus 33 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 85 (227)
T 3dkw_A 33 DLVNLDKGAYVFRQ-GEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFA 85 (227)
T ss_dssp EEEECCTTEEEECT-TSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEES
T ss_pred EEEEECCCCEEEcC-CCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 44567777754322 223578999999999988766523333445788999874
No 226
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=56.05 E-value=33 Score=29.73 Aligned_cols=52 Identities=6% Similarity=0.031 Sum_probs=35.6
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
+....+.+|..+--.=. ....+.+|++|.+.+.. +.++.+.....+.+||++
T Consensus 168 ~~~~~~~~Ge~I~~qGd-~~d~~YiI~sG~v~v~~-~~~G~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGD-DGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 219 (416)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEECEEEEEE-ECSSCEEEEEEEESCCEE
T ss_pred cEEEEeCCCCEEEeCCC-CCceEEEEEeeEEEEEE-ecCCCEEEEEEecCCCEE
Confidence 44567777775433223 35789999999999987 442334455689999976
No 227
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=55.13 E-value=48 Score=26.99 Aligned_cols=63 Identities=17% Similarity=0.204 Sum_probs=37.9
Q ss_pred EEEEEEeCCccccceecCC------------CCEEEEEEe------CEEEEEEEecCCCeEEEEEEcCCCEEEECCCCee
Q 028365 87 LARLDLAKGGVIPIHTHPA------------ASEILLVVH------GCITAGFISSSANTVYVKTLKKGDIMIFPQGLLH 148 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~------------a~Ei~yVl~------G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H 148 (210)
+-...+.+|+...+|+-.- .+=++|.-. |+..+. + .........++|+++++|.+..|
T Consensus 101 ~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~--~--~~~~~~V~P~~G~~v~F~s~~lH 176 (243)
T 3dkq_A 101 PLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQ--D--TYGQQSIKLSAGSLVLYPSSSLH 176 (243)
T ss_dssp EEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEE--E--TTEEEEECCCTTCEEEEETTSEE
T ss_pred ceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEe--e--CCCcEEEecCCCEEEEECCCCeE
Confidence 5566788999998886421 111222222 332222 1 12223447889999999999999
Q ss_pred EEEeC
Q 028365 149 FQVNS 153 (210)
Q Consensus 149 ~~~N~ 153 (210)
....+
T Consensus 177 ~v~pV 181 (243)
T 3dkq_A 177 QVTPV 181 (243)
T ss_dssp EECCE
T ss_pred cCccc
Confidence 87654
No 228
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=54.90 E-value=17 Score=27.77 Aligned_cols=49 Identities=24% Similarity=0.238 Sum_probs=33.8
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMI 141 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~ 141 (210)
+....+.||..+-.- ...+.++.+|++|++.+.. ++. ....+.+||++=
T Consensus 98 ~~~~~~~~ge~I~~~-G~~~~~ly~I~~G~v~v~~----~~~-~~~~l~~G~~fG 146 (212)
T 3ukn_A 98 IKTSFCAPGEFLIRQ-GDALQAIYFVCSGSMEVLK----DNT-VLAILGKGDLIG 146 (212)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEECCEEEES----SSC-EEEEECTTCEEE
T ss_pred hheEEeCCCCEEEEC-CCcccEEEEEEecEEEEEE----CCe-EEEEecCCCCcC
Confidence 445677888864222 2235799999999998875 343 345899999874
No 229
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=54.28 E-value=9 Score=34.24 Aligned_cols=22 Identities=23% Similarity=0.262 Sum_probs=18.6
Q ss_pred EEEEcCCCEEEECCCCeeEEEe
Q 028365 131 VKTLKKGDIMIFPQGLLHFQVN 152 (210)
Q Consensus 131 ~~~l~~GDv~~~P~g~~H~~~N 152 (210)
...|+|||.+++|+|.+|....
T Consensus 267 ~v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEEE
T ss_pred eEecCCCCEEecCCCCccccCC
Confidence 3479999999999999996643
No 230
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=53.06 E-value=17 Score=25.33 Aligned_cols=45 Identities=20% Similarity=0.298 Sum_probs=30.9
Q ss_pred EEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 88 ARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 88 ~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
....+++|..+-.- -..+..+.+|++|.+++.. .+ ...+.+||++
T Consensus 35 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~----~~---~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRI-GEPGDRMFFVVEGSVSVAT----PN---PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECT-TSCCCEEEEEEESCEEECS----SS---CEEECTTCEE
T ss_pred cEEEeCCCCEEEeC-CCCcceEEEEEeeEEEEEe----CC---cceECCCCEe
Confidence 45677888764322 2235789999999999875 33 2378999975
No 231
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=51.64 E-value=21 Score=28.79 Aligned_cols=52 Identities=17% Similarity=0.316 Sum_probs=34.6
Q ss_pred EEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEe-cCCCeEEEEEEcCCCEE
Q 028365 88 ARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFIS-SSANTVYVKTLKKGDIM 140 (210)
Q Consensus 88 ~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~-~~~~~~~~~~l~~GDv~ 140 (210)
....+.+|..+-. --..+..+.+|++|++++...+ +++.+.....+.+||++
T Consensus 181 ~~~~~~~g~~I~~-~G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 181 EETHYENGEYIIR-QGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp EEEEECTTCEEEC-TTCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred cEEEECCCCEEEe-CCCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 4556677765321 2223468999999999998765 22334455689999987
No 232
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=51.23 E-value=50 Score=23.36 Aligned_cols=49 Identities=22% Similarity=0.263 Sum_probs=33.1
Q ss_pred EEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEE
Q 028365 88 ARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIF 142 (210)
Q Consensus 88 ~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~ 142 (210)
....+++|..+-. -...+..+.+|++|.+++.. .++ ....+.+||++=.
T Consensus 51 ~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~----~~~-~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 51 QTVHCAPGDLIYH-AGESVDSLCFVVSGSLEVIQ----DDE-VVAILGKGDVFGD 99 (160)
T ss_dssp EEEEECTTCEEEC-TTSBCCEEEEEEESEEEEEE----TTE-EEEEEETTCEEEC
T ss_pred eeeeeCCCCEEEe-CCCCccEEEEEEeeEEEEEE----CCE-EEEEecCCCEeCc
Confidence 3466777775322 22335799999999999876 333 3458999998743
No 233
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=49.18 E-value=18 Score=27.91 Aligned_cols=47 Identities=15% Similarity=0.180 Sum_probs=32.2
Q ss_pred EEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 88 ARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 88 ~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
....+++|..+-.- -..+..+.+|++|++++.. +++. ...+.+||++
T Consensus 31 ~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~v~~----~~~~-~~~~~~g~~f 77 (246)
T 3of1_A 31 EEKSVPKGATIIKQ-GDQGDYFYVVEKGTVDFYV----NDNK-VNSSGPGSSF 77 (246)
T ss_dssp EEEEECTTCEEECT-TCCCCEEEEEEECCEEEES----TTSC-CEEECTTCEE
T ss_pred ceEEECCCCEEEec-CCCCCEEEEEEeeEEEEEE----CCEE-EEecCCCCee
Confidence 35667777754222 2245799999999999875 3332 3589999987
No 234
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=48.28 E-value=18 Score=33.14 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=26.0
Q ss_pred EEEEEEcCCCEEEECCCCeeEEEeCCCCCEE
Q 028365 129 VYVKTLKKGDIMIFPQGLLHFQVNSGADGAL 159 (210)
Q Consensus 129 ~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a~ 159 (210)
.++.+=++||.+++++|..||.+|.|-.-.+
T Consensus 337 vyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~ 367 (531)
T 3avr_A 337 VYRFIQRPGDLVWINAGTVHWVQAIGWCNNI 367 (531)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecceeeee
Confidence 3466889999999999999999999964433
No 235
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=47.44 E-value=42 Score=26.66 Aligned_cols=48 Identities=8% Similarity=0.217 Sum_probs=33.9
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
+....+++|..+-. -...+..+.+|++|++.+.. +++ ....+.+||++
T Consensus 62 ~~~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~~----~g~-~~~~l~~G~~f 109 (291)
T 2qcs_B 62 MFPVSFIAGETVIQ-QGDEGDNFYVIDQGEMDVYV----NNE-WATSVGEGGSF 109 (291)
T ss_dssp CEEEEECTTCEEEC-TTSBCCEEEEEEECCEEEEE----TTE-EEEEECTTCEE
T ss_pred ccEEEECCCCEEEe-CCCCCceEEEEeeeEEEEEE----CCe-EEEEcCCCCcc
Confidence 34567788776432 22245789999999999886 454 34689999987
No 236
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=47.40 E-value=20 Score=32.72 Aligned_cols=88 Identities=15% Similarity=0.164 Sum_probs=52.4
Q ss_pred ceEEEeeccccCcccCcceEEEEEEEeCCccccceecC-CCCEEEEEEeCEEEEEEEecC--------------------
Q 028365 67 AAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHP-AASEILLVVHGCITAGFISSS-------------------- 125 (210)
Q Consensus 67 g~~~~~~~~~~P~l~~~gis~~~v~l~pgg~~~pH~Hp-~a~Ei~yVl~G~~~v~vv~~~-------------------- 125 (210)
|++..--....||+++..+.+. .+|...++|.=. .-.-+-|-+-|.-.+++.-+.
T Consensus 221 gslLs~l~~~I~GVNtpqLYig----m~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l~~k~~~d~l~~ 296 (510)
T 4ask_A 221 GNMLSHVGHTILGMNTVQLYMK----VPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTG 296 (510)
T ss_dssp TBGGGGSSSCCTTTTSCEEEEE----CTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTCCTTTS
T ss_pred CchhhhCCCcCCCcChhheEEc----cccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHHHHHhCcchhhc
Confidence 3343333457788887554443 456677777621 123445555553222222120
Q ss_pred ------------CCeEEEEEEcCCCEEEECCCCeeEEEeCCCCCE
Q 028365 126 ------------ANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGA 158 (210)
Q Consensus 126 ------------~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~a 158 (210)
+=..++.+=++||.+++++|..||++|.|-..-
T Consensus 297 ~~~pspe~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~n 341 (510)
T 4ask_A 297 SWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNN 341 (510)
T ss_dssp CBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEE
T ss_pred cccCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecCeeee
Confidence 112346688999999999999999999986433
No 237
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=44.94 E-value=32 Score=27.33 Aligned_cols=33 Identities=9% Similarity=0.045 Sum_probs=26.6
Q ss_pred CEEEEEEeCEEEEEEEecCC-CeEEEEEEcCCCEEEECCC
Q 028365 107 SEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQG 145 (210)
Q Consensus 107 ~Ei~yVl~G~~~v~vv~~~~-~~~~~~~l~~GDv~~~P~g 145 (210)
.-++|+++|+..+.+ + ++.+ .|.+||..++-..
T Consensus 141 ~~~v~~l~G~~~v~~----~~~~~~--~L~~~d~l~~~~~ 174 (200)
T 1yll_A 141 TLLLFAQQDGVAISL----QGQPRG--QLAAHDCLCAEGL 174 (200)
T ss_dssp EEEEEESSSCEEEEE----TTEEEE--EECTTCEEEEESC
T ss_pred EEEEEEccCcEEEEc----CCCcee--ecCCCCEEEEeCC
Confidence 689999999998876 4 4544 9999999988654
No 238
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=44.81 E-value=29 Score=24.11 Aligned_cols=48 Identities=13% Similarity=0.266 Sum_probs=31.9
Q ss_pred EEEEEEe-CCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 87 LARLDLA-KGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~-pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
+....+. +|..+ .+-...+..+.+|++|.+++.. . +++. ..+.+||++
T Consensus 39 ~~~~~~~~~g~~i-~~~g~~~~~~y~i~~G~v~~~~--~-~g~~--~~l~~G~~f 87 (134)
T 2d93_A 39 MIFEVVEQAGAII-LEDGQELDSWYVILNGTVEISH--P-DGKV--ENLFMGNSF 87 (134)
T ss_dssp EEEEEECSSSCEE-ECTTCEECEEEECCBSCEEEEC--S-SSCE--EEECTTCEE
T ss_pred heEEEecCCCCEE-EeCCCCCCeEEEEEeCEEEEEc--C-CCcE--EEecCCCcc
Confidence 3456677 66643 2223334679999999999873 3 4564 479999976
No 239
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=43.02 E-value=1e+02 Score=26.86 Aligned_cols=39 Identities=13% Similarity=-0.021 Sum_probs=33.6
Q ss_pred EEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeEEE
Q 028365 111 LVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQV 151 (210)
Q Consensus 111 yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~~~ 151 (210)
.|++|++++.+-.+ +......|.++|..++-+-+.|.+.
T Consensus 359 ~v~~G~lTL~W~~~--dGt~~a~L~PDgSAwv~PFV~H~w~ 397 (443)
T 3g7d_A 359 VVTEGRLTLEWDGP--DGPASVELEPDGSAWTGPFVRHRWH 397 (443)
T ss_dssp EEEESCEEEEEEET--TEEEEEEECTTCEEEECTTCCEEEE
T ss_pred EEecCceEEEecCC--CCccceEECCCCceeeccccccccc
Confidence 48899999998554 4458889999999999999999987
No 240
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=42.32 E-value=44 Score=25.54 Aligned_cols=48 Identities=15% Similarity=0.148 Sum_probs=31.5
Q ss_pred EEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 88 ARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 88 ~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
....+.+|..+-- --..+..+.+|++|++++... +.. ....+.+||++
T Consensus 149 ~~~~~~~g~~i~~-~g~~~~~~y~I~~G~v~v~~~---~~~-~~~~l~~g~~f 196 (246)
T 3of1_A 149 DTKIYQPGETIIR-EGDQGENFYLIEYGAVDVSKK---GQG-VINKLKDHDYF 196 (246)
T ss_dssp EEEEECTTCEEEC-TTSBCCEEEEEEECEEEEEET---TTE-EEEEEETTCEE
T ss_pred heEEeCCCCEEEe-CCCcCCEEEEEEecEEEEEEc---CCc-eEEEcCCCCcc
Confidence 4456677765322 222357899999999998762 222 34589999976
No 241
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=41.67 E-value=51 Score=26.37 Aligned_cols=48 Identities=13% Similarity=0.194 Sum_probs=33.5
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
+....+++|..+--.-. .+..+.+|++|.+++.. +++ ....+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~G~-~~~~~yiI~~G~v~v~~----~g~-~~~~~~~G~~f 109 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGD-VGSLVYVMEDGKVEVTK----EGV-KLCTMGPGKVF 109 (299)
T ss_dssp CEEEEECTTCEEECTTC-BCCCEEEEEESCEEEEE----TTE-EEEEECTTCEE
T ss_pred cCeEEECCCCEEEcCCC-cCceEEEEEEEEEEEEE----CCE-EEEEeCCCCee
Confidence 44567788875433223 35789999999999854 454 34589999986
No 242
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=37.78 E-value=63 Score=27.81 Aligned_cols=53 Identities=17% Similarity=0.130 Sum_probs=36.8
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCC---eEEEEEEcCCCEEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAN---TVYVKTLKKGDIMI 141 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~---~~~~~~l~~GDv~~ 141 (210)
+....+++|..+- +-...+..+.+|++|.+.+...++ +| +.....+.+||++=
T Consensus 65 ~~~~~~~~g~~i~-~~Gd~~~~~y~i~~G~v~v~~~~~-~g~~~~~~~~~~~~G~~fG 120 (469)
T 1o7f_A 65 GYYENLEKGITLF-RQGDIGTNWYAVLAGSLDVKVSET-SSHQDAVTICTLGIGTAFG 120 (469)
T ss_dssp CEEEEECTTCEEE-CTTSBCCEEEEEEESCEEEEECSS-SCGGGCEEEEEECTTCEEC
T ss_pred ceEEEECCCCEEE-eCCCCCCcEEEEEeeEEEEEEecC-CCCCcceEEEEccCCCCcc
Confidence 3456777877542 223345789999999999987655 33 25566899999874
No 243
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=37.02 E-value=71 Score=23.77 Aligned_cols=54 Identities=11% Similarity=0.059 Sum_probs=38.0
Q ss_pred ccceecCCCCEEEEEEeCEEEEEEEecC-------------------CC-eEEEEEEcCCCEEEECCCCeeEEE
Q 028365 98 IPIHTHPAASEILLVVHGCITAGFISSS-------------------AN-TVYVKTLKKGDIMIFPQGLLHFQV 151 (210)
Q Consensus 98 ~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~-------------------~~-~~~~~~l~~GDv~~~P~g~~H~~~ 151 (210)
..+=.|.+-..+.|+++|+=++++.... ++ ......|++|+..+|-++-+|.-.
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~ 133 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPC 133 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEE
T ss_pred cccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCcccccc
Confidence 4566687788999999998777764310 01 112347899999999999999753
No 244
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=33.98 E-value=61 Score=27.89 Aligned_cols=46 Identities=17% Similarity=0.201 Sum_probs=31.9
Q ss_pred EEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 90 LDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 90 v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
..+++|..+-. --..+..+.+|++|++.+.. .++.....+.+||++
T Consensus 364 ~~~~~g~~i~~-~G~~~~~~yiI~~G~v~v~~----~~~~~~~~l~~G~~f 409 (469)
T 1o7f_A 364 SHAKGGTVLFN-QGEEGTSWYIILKGSVNVVI----YGKGVVCTLHEGDDF 409 (469)
T ss_dssp EECSTTCEEEC-TTSCCCEEEEEEESEEEEEE----TTTEEEEEEETTCEE
T ss_pred eEecCCCEEEe-CCCcCCeEEEEEEeEEEEEE----cCCeeEEEecCCCEE
Confidence 46677775432 23345789999999999876 333345589999976
No 245
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=33.92 E-value=58 Score=17.93 Aligned_cols=29 Identities=7% Similarity=-0.167 Sum_probs=23.6
Q ss_pred HhhcCCHHHHHHhcCCCHHHHHHHhhhhC
Q 028365 179 FANNLSSQLVEQTTFLDDATVKRLKAILG 207 (210)
Q Consensus 179 f~s~~p~~vla~~f~~~~~~v~~l~~~~~ 207 (210)
+..+++..-+|+.++++..+|.+..+.+.
T Consensus 18 ~~~g~s~~~IA~~lgis~~Tv~~~~~~~~ 46 (51)
T 1tc3_C 18 KLLNVSLHEMSRKISRSRHCIRVYLKDPV 46 (51)
T ss_dssp HHTTCCHHHHHHHHTCCHHHHHHHHHCST
T ss_pred HHcCCCHHHHHHHHCcCHHHHHHHHhhHH
Confidence 34468888899999999999999877654
No 246
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=33.49 E-value=8.6 Score=26.98 Aligned_cols=48 Identities=15% Similarity=0.317 Sum_probs=28.6
Q ss_pred EEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeE-EEE--EEcCCCEE
Q 028365 90 LDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTV-YVK--TLKKGDIM 140 (210)
Q Consensus 90 v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~-~~~--~l~~GDv~ 140 (210)
..+++|..+- +-...+..+.+|++|.+++. .++ +++. ... .+.+||++
T Consensus 32 ~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~-~~~-~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 32 CLFTEKSYLV-REGDPVNEMLFIIRGRLESV-TTD-GGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CCBCTTEEEE-CTTSBCSEEEEEEECCCEEE-CCS-SCSSSSSCEEECCTTCBS
T ss_pred EEeCCCCEEE-eCCCCCCeEEEEEeeEEEEE-EcC-CCcceeeeeeeecCCCEe
Confidence 4556665432 22234578999999999964 333 3432 112 78889865
No 247
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=32.58 E-value=57 Score=31.59 Aligned_cols=33 Identities=18% Similarity=0.286 Sum_probs=24.1
Q ss_pred CCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 104 PAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 104 p~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
..+..|.+|++|++.|.. .++.....|++||.|
T Consensus 377 E~gds~YIIlsG~V~V~~----~~~~~v~~L~~Gd~F 409 (999)
T 4f7z_A 377 EEGTSWYIILKGSVNVVI----YGKGVVCTLHEGDDF 409 (999)
T ss_dssp SBCCEEEEEEESEEEEEE----TTTEEEEEEETTCEE
T ss_pred CcCCeEEEEEeeEEEEEE----cCCcceEEecCCCcc
Confidence 345788999999998875 333234589999986
No 248
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=31.12 E-value=33 Score=19.54 Aligned_cols=21 Identities=10% Similarity=0.010 Sum_probs=17.0
Q ss_pred CHHHHHHhcCCCHHHHHHHhh
Q 028365 184 SSQLVEQTTFLDDATVKRLKA 204 (210)
Q Consensus 184 p~~vla~~f~~~~~~v~~l~~ 204 (210)
+++-..+.|+++.++..+|++
T Consensus 2 sd~dF~~vFgmsr~eF~~LP~ 22 (35)
T 1wy3_A 2 SDEDFKAVFGMTRSAFANLPL 22 (35)
T ss_dssp CHHHHHHHHSSCHHHHHHSCH
T ss_pred CHHHHHHHHCCCHHHHHHCcH
Confidence 456677889999999998764
No 249
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=30.99 E-value=33 Score=19.74 Aligned_cols=23 Identities=17% Similarity=0.013 Sum_probs=19.2
Q ss_pred cCCHHHHHHhcCCCHHHHHHHhh
Q 028365 182 NLSSQLVEQTTFLDDATVKRLKA 204 (210)
Q Consensus 182 ~~p~~vla~~f~~~~~~v~~l~~ 204 (210)
.++++-..+.|+++.++..+|++
T Consensus 2 yLsd~dF~~vFgmsr~eF~~LP~ 24 (37)
T 1und_A 2 YLSEQDFVSVFGITRGQFAALPG 24 (37)
T ss_dssp CCCHHHHHHHHSSCHHHHHHSCH
T ss_pred CCCHHHHHHHHCcCHHHHHHChH
Confidence 36777888899999999999864
No 250
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.60 E-value=58 Score=22.29 Aligned_cols=32 Identities=19% Similarity=0.334 Sum_probs=26.1
Q ss_pred chHhHHhhcCCHHHHHHhcCCCHHHHHHHhhhh
Q 028365 174 TDFALFANNLSSQLVEQTTFLDDATVKRLKAIL 206 (210)
Q Consensus 174 i~~~~f~s~~p~~vla~~f~~~~~~v~~l~~~~ 206 (210)
|...+|. .+++|+|..-|+++.-.+.|+.+-.
T Consensus 45 IDG~lL~-~L~ee~L~edf~ls~Lq~kKi~~fI 76 (84)
T 2dkz_A 45 IDGNLLV-QLTEEILSEDFKLSKLQVKKIMQFI 76 (84)
T ss_dssp CCHHHHH-HCCHHHHHHTSCCCHHHHHHHHHHH
T ss_pred cchHHHH-hCCHHHHHhhcCCCHHHHHHHHHHH
Confidence 4445665 5999999999999999999988754
No 251
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=27.53 E-value=52 Score=28.42 Aligned_cols=53 Identities=13% Similarity=0.159 Sum_probs=31.9
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecC------CCeEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS------ANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~------~~~~~~~~l~~GDv~ 140 (210)
+....+.+|..+- +--..+..+.+|++|++++...+.+ +.+.....+.+||++
T Consensus 290 l~~~~~~~Ge~I~-~eGd~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQII-AQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEE-CTTSCCCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEE-eCCCcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 3445667776432 2223457899999999998865431 112234588999976
No 252
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=27.45 E-value=3.1e+02 Score=23.86 Aligned_cols=68 Identities=15% Similarity=0.016 Sum_probs=47.2
Q ss_pred CCEEEECCCCeeEEEeCCCCCEEEEEEecCCCC-----------------------Cceech----HhHHhhcCCHHHHH
Q 028365 137 GDIMIFPQGLLHFQVNSGADGALGFVSFNSPNP-----------------------GLQITD----FALFANNLSSQLVE 189 (210)
Q Consensus 137 GDv~~~P~g~~H~~~N~g~~~a~~~~~f~s~~p-----------------------g~~~i~----~~~f~s~~p~~vla 189 (210)
||.++-|.-.+|...-.++.|+.+++--...+- +....+ ..+-.++++.+=+|
T Consensus 171 gdsyveps~cphty~l~~d~parivsyt~~s~l~~l~~e~n~w~~~a~e~~l~~l~~~~aagv~LR~ar~ReglTQ~~LA 250 (443)
T 3g7d_A 171 GDSYVEPSYCPHSYSLAGDAPARIVSYTAQSNISPLMTEANNWSTGAFEEALKALSGKVSAGSVLDLFLARRAHTRTSAA 250 (443)
T ss_dssp BCEEEECTTCCCEEEESSSSCEEEEEEECCCTTHHHHHHHTTSCHHHHHHHHHHHSSCCCHHHHHHHHHHHTTCCHHHHH
T ss_pred CCcccccccCCcccccccCCchheEeeccccchHHHHHhhcccccHHHHHHHHhhcccchHHHHHHHHHHhcCCCHHHHH
Confidence 999999999999888889999998853222221 111110 11222368888999
Q ss_pred HhcCCCHHHHHHHhh
Q 028365 190 QTTFLDDATVKRLKA 204 (210)
Q Consensus 190 ~~f~~~~~~v~~l~~ 204 (210)
+..|++.+.|..+..
T Consensus 251 e~TGIPq~hISeMen 265 (443)
T 3g7d_A 251 EAAGVPPADLEAALR 265 (443)
T ss_dssp HHHTCCHHHHHHHHH
T ss_pred HHhCCCHHHHHHHhc
Confidence 999999998877654
No 253
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=27.08 E-value=56 Score=27.72 Aligned_cols=50 Identities=16% Similarity=0.226 Sum_probs=31.3
Q ss_pred EEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCC-eEEEEEEcCCCEE
Q 028365 90 LDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAN-TVYVKTLKKGDIM 140 (210)
Q Consensus 90 v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~-~~~~~~l~~GDv~ 140 (210)
..+.+|..+-. --..+..+.+|++|++++...+.+++ ......+.+||.+
T Consensus 274 ~~~~~ge~I~~-eGd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 274 VQFEDGEKIVV-QGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCBCSSCBSSC-TTSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred ccCCCCCEEEe-CCCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 34455554321 22235789999999999987543222 2234589999987
No 254
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=26.30 E-value=52 Score=27.92 Aligned_cols=48 Identities=10% Similarity=0.178 Sum_probs=34.2
Q ss_pred EEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 87 LARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 87 ~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
+....+++|..+--.=. .+..+.+|++|++.+.. +++. ...+.+||++
T Consensus 153 ~~~~~~~~ge~I~~~Gd-~~~~~yiI~~G~v~v~~----~~~~-v~~l~~G~~f 200 (381)
T 4din_B 153 MFPVTHIAGETVIQQGN-EGDNFYVVDQGEVDVYV----NGEW-VTNISEGGSF 200 (381)
T ss_dssp CEEEECCTTCBSSCTTS-BCCEEEECSSSEEEEEE----TTEE-EEEEESSCCB
T ss_pred ceEEEECCCCEEEeCCC-CCCeEEEEEeeEEEEEE----CCeE-eeeCCCCCEE
Confidence 45577788876433223 35789999999999986 5553 3479999985
No 255
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=25.77 E-value=99 Score=25.90 Aligned_cols=48 Identities=17% Similarity=0.018 Sum_probs=33.9
Q ss_pred ceEEEEEEEeCCcc-ccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeE
Q 028365 84 GLSLARLDLAKGGV-IPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHF 149 (210)
Q Consensus 84 gis~~~v~l~pgg~-~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~ 149 (210)
|.....+.+.||.. -..-.|+- .|=+|+++|.. ..|+-++-|+|+.|.
T Consensus 216 G~~TrLlr~~Pg~dt~~v~iHdy-~EEvY~LeG~~-----------------d~G~Y~~RPpg~~HG 264 (303)
T 2qdr_A 216 GGGVWLLAILPHFDNKYQMIQPY-NEEGYCLTGYC-----------------DVGDYRIVKDHYWYC 264 (303)
T ss_dssp SCEEEEEEECSSEECCSEEEECS-CEEEEEEEEEE-----------------EETTEEEETTEEEEE
T ss_pred CCeEEEEEECCCCCCCCceeecc-ceeEEEEeeec-----------------cCceeeEcCCCCccC
Confidence 45666677778764 33444654 78889999975 237778889999997
No 256
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=23.34 E-value=70 Score=22.38 Aligned_cols=20 Identities=40% Similarity=0.587 Sum_probs=15.5
Q ss_pred CCeEEEEEEcCCCEEEECCC
Q 028365 126 ANTVYVKTLKKGDIMIFPQG 145 (210)
Q Consensus 126 ~~~~~~~~l~~GDv~~~P~g 145 (210)
+++.....++.||.++++.|
T Consensus 51 ~G~~~p~~VkvGD~Vlf~k~ 70 (97)
T 1pcq_O 51 NGEVKPLDVKVGDIVIFNDG 70 (97)
T ss_dssp SSSCEECSCCTTCEEEECCC
T ss_pred CCCEEecccCCCCEEEECCc
Confidence 45555557999999999994
No 257
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=21.88 E-value=1.5e+02 Score=28.54 Aligned_cols=54 Identities=19% Similarity=0.167 Sum_probs=36.4
Q ss_pred EEEEEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecC--CCeEEEEEEcCCCEE
Q 028365 86 SLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS--ANTVYVKTLKKGDIM 140 (210)
Q Consensus 86 s~~~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~--~~~~~~~~l~~GDv~ 140 (210)
.+....+++|..+---=. .++.|.+|++|++.+.+-++. +.+.....+.+||.|
T Consensus 64 ~m~ye~~~~Ge~IfrqGd-~gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sF 119 (999)
T 4f7z_A 64 CGYYENLEKGITLFRQGD-IGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAF 119 (999)
T ss_dssp HCEEEEECTTCEEECTTS-CCCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEE
T ss_pred heEEEEECCCCEEEcCCC-cCCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcch
Confidence 455567777775322223 468999999999999874331 223445689999986
No 258
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=21.77 E-value=92 Score=26.73 Aligned_cols=22 Identities=27% Similarity=0.365 Sum_probs=19.7
Q ss_pred EEEEEcCCCEEEECCCCeeEEE
Q 028365 130 YVKTLKKGDIMIFPQGLLHFQV 151 (210)
Q Consensus 130 ~~~~l~~GDv~~~P~g~~H~~~ 151 (210)
...++++||+++|...++|...
T Consensus 234 ~ewd~epGDav~F~~~tlHga~ 255 (344)
T 3nnf_A 234 EEDEYNLGDAFFFNKYVLHQSV 255 (344)
T ss_dssp EECCBCTTCEEEEETTCEEEEC
T ss_pred ccccCCCCcEEEEecceeecCC
Confidence 3558999999999999999887
No 259
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=20.53 E-value=1.4e+02 Score=27.96 Aligned_cols=47 Identities=17% Similarity=0.228 Sum_probs=32.6
Q ss_pred EEEEeCCccccceecCCCCEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEE
Q 028365 89 RLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIM 140 (210)
Q Consensus 89 ~v~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~ 140 (210)
...+++|..+- +-...+..+.+|++|.+++.. .++.....+.+||++
T Consensus 58 ~~~~~kGe~I~-~eGd~~~~lyiIlsG~V~v~~----~g~~il~~l~~Gd~f 104 (694)
T 3cf6_E 58 ESHAKGGTVLF-NQGEEGTSWYIILKGSVNVVI----YGKGVVCTLHEGDDF 104 (694)
T ss_dssp EEECSTTCEEE-CTTSBCCEEEEEEESEEEEEE----TTTEEEEEEETTCEE
T ss_pred EEEECCCCEEE-CCCCcCCeEEEEEEEEEEEEE----eCCEEEEEeCCCCEe
Confidence 45677777542 223345789999999999886 333345689999976
No 260
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=20.42 E-value=89 Score=28.12 Aligned_cols=51 Identities=20% Similarity=0.142 Sum_probs=36.4
Q ss_pred EEEEeCCccccceecCCC-CEEEEEEeCEEEEEEEecCCCeEEEEEEcCCCEEEECCCCeeE
Q 028365 89 RLDLAKGGVIPIHTHPAA-SEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHF 149 (210)
Q Consensus 89 ~v~l~pgg~~~pH~Hp~a-~Ei~yVl~G~~~v~vv~~~~~~~~~~~l~~GDv~~~P~g~~H~ 149 (210)
|....+..+++|-+|.+. .|+++.+.|.... | ..-+.+|.+-+=|.+++|.
T Consensus 347 Rw~v~e~TfrpPyyHrNv~SEfmgli~G~y~a--------k--~~Gf~pGg~SLH~~~~pHG 398 (471)
T 1eyb_A 347 RWGVADKTFRPPYYHRNCMSEFMGLIRGHYEA--------K--QGGFLPGGGSLHSTMTPHG 398 (471)
T ss_dssp EEECCSSSCCSCCCBCCSCEEEEEECCC------------------CCTTCEEEECTTCCBC
T ss_pred ccCCCCCccCCCCCccchhhhhhhhccccccc--------c--ccCcCCCceeccCCCcCCC
Confidence 557788889999999543 5799998887422 2 1258999999999999995
Done!