Query 028370
Match_columns 210
No_of_seqs 170 out of 1928
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 10:27:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028370.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028370hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 99.9 4.2E-28 9.1E-33 170.6 8.1 131 27-167 29-162 (226)
2 KOG4412 26S proteasome regulat 99.9 5.6E-27 1.2E-31 165.0 8.9 130 28-167 65-195 (226)
3 KOG0509 Ankyrin repeat and DHH 99.9 1.8E-25 3.9E-30 183.3 11.6 170 7-186 51-220 (600)
4 PHA02791 ankyrin-like protein; 99.9 3.1E-23 6.8E-28 161.9 14.0 125 30-166 25-150 (284)
5 PHA02791 ankyrin-like protein; 99.9 9E-23 2E-27 159.3 13.8 130 27-167 86-217 (284)
6 PHA02741 hypothetical protein; 99.9 6.5E-23 1.4E-27 149.4 12.1 133 27-169 13-157 (169)
7 PHA02859 ankyrin repeat protei 99.9 4.4E-22 9.6E-27 149.7 14.2 134 26-168 42-183 (209)
8 PHA02875 ankyrin repeat protei 99.9 3.5E-22 7.6E-27 165.0 14.7 127 34-169 67-193 (413)
9 PHA02875 ankyrin repeat protei 99.9 5.3E-22 1.1E-26 163.9 13.8 128 31-168 98-226 (413)
10 PHA02878 ankyrin repeat protei 99.9 1.8E-21 3.8E-26 163.5 15.1 129 26-166 158-289 (477)
11 PHA02743 Viral ankyrin protein 99.9 8.2E-22 1.8E-26 143.1 11.3 130 28-167 13-151 (166)
12 PHA02874 ankyrin repeat protei 99.9 1.8E-21 4E-26 161.7 14.7 120 26-153 115-234 (434)
13 PHA02878 ankyrin repeat protei 99.9 9.1E-22 2E-26 165.3 12.8 118 25-151 191-309 (477)
14 KOG0509 Ankyrin repeat and DHH 99.9 4E-22 8.7E-27 163.8 9.5 132 25-166 101-234 (600)
15 KOG0512 Fetal globin-inducing 99.9 1.9E-21 4.1E-26 136.3 11.4 145 11-164 74-219 (228)
16 KOG0508 Ankyrin repeat protein 99.9 3.7E-22 8.1E-27 158.9 8.6 142 11-165 95-236 (615)
17 KOG0502 Integral membrane anky 99.9 6.5E-22 1.4E-26 143.6 8.5 122 26-155 151-272 (296)
18 PHA03095 ankyrin-like protein; 99.9 2.6E-21 5.6E-26 162.2 13.3 147 11-167 25-177 (471)
19 PHA02874 ankyrin repeat protei 99.9 6.6E-21 1.4E-25 158.3 15.6 129 28-166 28-179 (434)
20 PHA03100 ankyrin repeat protei 99.9 2.2E-21 4.8E-26 163.0 12.4 127 29-165 170-304 (480)
21 PHA02859 ankyrin repeat protei 99.9 3.9E-21 8.5E-26 144.6 12.5 120 25-152 76-202 (209)
22 PHA02946 ankyin-like protein; 99.9 2.4E-21 5.3E-26 160.8 12.2 135 25-165 62-231 (446)
23 PHA02884 ankyrin repeat protei 99.9 9.8E-21 2.1E-25 148.1 14.4 125 24-152 21-147 (300)
24 PHA03100 ankyrin repeat protei 99.9 8.7E-21 1.9E-25 159.5 14.3 132 27-168 133-274 (480)
25 PHA02798 ankyrin-like protein; 99.9 5.5E-21 1.2E-25 161.0 12.1 133 25-165 99-312 (489)
26 PHA02736 Viral ankyrin protein 99.9 2.8E-21 6.2E-26 138.8 8.5 130 28-167 10-149 (154)
27 PHA02716 CPXV016; CPX019; EVM0 99.9 4.7E-21 1E-25 165.2 11.2 134 26-167 167-342 (764)
28 PHA02989 ankyrin repeat protei 99.8 1.7E-20 3.6E-25 158.2 13.4 135 25-166 134-311 (494)
29 PHA02716 CPXV016; CPX019; EVM0 99.8 8.5E-21 1.8E-25 163.7 11.7 135 25-167 202-389 (764)
30 PHA02946 ankyin-like protein; 99.8 3.7E-20 7.9E-25 153.8 14.4 135 27-167 97-266 (446)
31 PLN03192 Voltage-dependent pot 99.8 2.8E-20 6E-25 165.1 14.3 145 11-169 536-680 (823)
32 KOG0195 Integrin-linked kinase 99.8 2.3E-20 5E-25 140.8 10.3 117 26-150 25-141 (448)
33 PHA02743 Viral ankyrin protein 99.8 7.1E-20 1.5E-24 133.0 12.5 110 26-143 48-162 (166)
34 PHA03095 ankyrin-like protein; 99.8 3.9E-20 8.5E-25 155.1 12.7 130 27-166 179-312 (471)
35 KOG0508 Ankyrin repeat protein 99.8 1E-20 2.2E-25 150.8 8.3 129 31-169 80-208 (615)
36 PHA02798 ankyrin-like protein; 99.8 6.5E-20 1.4E-24 154.5 12.0 135 25-167 61-209 (489)
37 KOG0514 Ankyrin repeat protein 99.8 5E-20 1.1E-24 142.6 8.9 149 28-186 261-415 (452)
38 PHA02989 ankyrin repeat protei 99.8 2E-19 4.3E-24 151.7 13.4 136 25-168 98-280 (494)
39 PF12796 Ank_2: Ankyrin repeat 99.8 3.3E-19 7.1E-24 116.2 11.4 88 39-138 1-88 (89)
40 PHA02795 ankyrin-like protein; 99.8 2.1E-19 4.5E-24 146.2 12.0 129 36-168 150-286 (437)
41 PHA02917 ankyrin-like protein; 99.8 2.7E-19 5.9E-24 154.3 13.3 121 39-165 107-252 (661)
42 PHA02876 ankyrin repeat protei 99.8 2.8E-19 6.1E-24 156.2 12.9 119 25-151 365-485 (682)
43 KOG0510 Ankyrin repeat protein 99.8 1.8E-19 3.9E-24 151.7 10.3 133 26-166 264-399 (929)
44 PHA02730 ankyrin-like protein; 99.8 6.3E-19 1.4E-23 149.8 12.7 134 25-167 369-521 (672)
45 KOG4177 Ankyrin [Cell wall/mem 99.8 2E-19 4.4E-24 158.6 9.8 127 33-169 505-631 (1143)
46 KOG0512 Fetal globin-inducing 99.8 1.5E-18 3.2E-23 121.9 11.4 140 38-186 66-208 (228)
47 PHA02876 ankyrin repeat protei 99.8 2.6E-18 5.7E-23 150.2 15.0 115 28-150 300-416 (682)
48 cd00204 ANK ankyrin repeats; 99.8 4E-18 8.7E-23 117.1 12.6 124 30-163 2-125 (126)
49 PHA02736 Viral ankyrin protein 99.8 1E-18 2.2E-23 125.4 9.8 99 29-133 49-152 (154)
50 KOG0510 Ankyrin repeat protein 99.8 3E-18 6.5E-23 144.4 12.9 155 10-169 188-366 (929)
51 PHA02730 ankyrin-like protein; 99.8 4.6E-18 9.9E-23 144.6 13.1 132 30-169 36-180 (672)
52 PHA02741 hypothetical protein; 99.8 8.6E-18 1.9E-22 122.4 12.8 101 26-132 51-157 (169)
53 PHA02917 ankyrin-like protein; 99.8 4.6E-18 1E-22 146.8 12.6 131 28-168 25-162 (661)
54 KOG0514 Ankyrin repeat protein 99.8 5.5E-18 1.2E-22 131.4 10.8 151 11-169 279-434 (452)
55 PHA02795 ankyrin-like protein; 99.8 4.8E-18 1E-22 138.3 10.8 130 30-169 111-246 (437)
56 PLN03192 Voltage-dependent pot 99.7 1.7E-17 3.8E-22 147.4 13.7 126 31-168 521-646 (823)
57 KOG4214 Myotrophin and similar 99.7 2.2E-17 4.7E-22 104.2 8.8 105 37-150 4-108 (117)
58 PHA02884 ankyrin repeat protei 99.7 6.1E-17 1.3E-21 126.9 12.9 126 26-168 57-186 (300)
59 KOG0505 Myosin phosphatase, re 99.7 3.9E-17 8.5E-22 132.2 11.3 148 12-169 52-256 (527)
60 KOG4177 Ankyrin [Cell wall/mem 99.7 1.5E-17 3.2E-22 147.0 9.5 120 28-153 533-655 (1143)
61 KOG0502 Integral membrane anky 99.7 3.3E-17 7.2E-22 119.3 9.2 128 28-167 122-249 (296)
62 PHA02792 ankyrin-like protein; 99.7 1.2E-16 2.6E-21 134.8 13.6 109 35-151 339-452 (631)
63 PHA02792 ankyrin-like protein; 99.7 3.7E-17 8E-22 137.9 10.4 136 25-166 61-239 (631)
64 TIGR00870 trp transient-recept 99.7 1E-16 2.2E-21 141.3 11.7 143 8-152 25-218 (743)
65 TIGR00870 trp transient-recept 99.7 7.3E-17 1.6E-21 142.3 9.8 130 33-166 126-279 (743)
66 KOG3676 Ca2+-permeable cation 99.7 3.1E-16 6.6E-21 132.6 12.6 129 34-166 183-330 (782)
67 COG0666 Arp FOG: Ankyrin repea 99.7 1.4E-15 3.1E-20 114.7 14.2 134 24-167 62-203 (235)
68 KOG0507 CASK-interacting adapt 99.7 8.9E-17 1.9E-21 134.7 6.7 131 26-166 40-170 (854)
69 KOG0515 p53-interacting protei 99.7 4E-16 8.7E-21 126.2 9.8 125 39-170 554-678 (752)
70 KOG0195 Integrin-linked kinase 99.7 9.2E-17 2E-21 121.5 4.5 115 43-167 8-123 (448)
71 PTZ00322 6-phosphofructo-2-kin 99.6 4E-15 8.7E-20 129.2 12.7 105 38-150 85-196 (664)
72 KOG0505 Myosin phosphatase, re 99.6 1.8E-15 4E-20 122.6 9.6 125 23-151 94-273 (527)
73 PF12796 Ank_2: Ankyrin repeat 99.6 2E-15 4.3E-20 98.2 7.8 82 76-167 1-82 (89)
74 PF13637 Ank_4: Ankyrin repeat 99.6 1E-14 2.2E-19 85.8 6.7 54 72-127 1-54 (54)
75 PF13637 Ank_4: Ankyrin repeat 99.6 1.7E-14 3.6E-19 84.8 6.6 54 35-92 1-54 (54)
76 KOG1710 MYND Zn-finger and ank 99.5 9.1E-14 2E-18 105.2 10.8 100 25-129 35-134 (396)
77 PF13857 Ank_5: Ankyrin repeat 99.5 8.1E-15 1.8E-19 86.8 3.3 50 96-149 7-56 (56)
78 KOG4214 Myotrophin and similar 99.5 5.7E-14 1.2E-18 88.8 7.2 94 11-113 13-106 (117)
79 KOG0507 CASK-interacting adapt 99.5 7.9E-14 1.7E-18 117.3 9.8 137 27-171 74-216 (854)
80 PF13857 Ank_5: Ankyrin repeat 99.5 2.2E-14 4.7E-19 84.9 4.4 55 54-114 1-56 (56)
81 cd00204 ANK ankyrin repeats; 99.5 1.1E-12 2.3E-17 89.8 12.5 93 29-127 34-126 (126)
82 KOG1710 MYND Zn-finger and ank 99.5 1.6E-13 3.4E-18 103.9 8.7 121 35-164 12-132 (396)
83 KOG3676 Ca2+-permeable cation 99.5 2E-13 4.4E-18 115.8 9.8 146 20-169 128-298 (782)
84 COG0666 Arp FOG: Ankyrin repea 99.5 5.4E-13 1.2E-17 100.5 9.8 99 26-130 97-203 (235)
85 KOG0515 p53-interacting protei 99.4 3.1E-12 6.8E-17 104.0 8.7 113 11-130 561-675 (752)
86 KOG4369 RTK signaling protein 99.3 9.5E-13 2.1E-17 114.9 4.3 131 31-170 753-883 (2131)
87 PTZ00322 6-phosphofructo-2-kin 99.3 7E-12 1.5E-16 109.2 8.2 86 75-166 85-170 (664)
88 KOG0818 GTPase-activating prot 99.2 1.3E-10 2.7E-15 94.1 10.0 101 24-129 116-222 (669)
89 KOG4369 RTK signaling protein 99.1 3.7E-11 7.9E-16 105.3 4.3 135 27-168 782-916 (2131)
90 KOG0506 Glutaminase (contains 99.1 2.1E-10 4.6E-15 92.4 5.6 95 31-131 502-597 (622)
91 KOG0783 Uncharacterized conser 99.0 7.1E-11 1.5E-15 100.8 1.9 82 28-114 45-126 (1267)
92 KOG0705 GTPase-activating prot 99.0 2.3E-09 5E-14 88.4 10.1 117 13-131 602-718 (749)
93 KOG0783 Uncharacterized conser 99.0 3.4E-10 7.4E-15 96.7 4.3 80 69-151 49-128 (1267)
94 PF13606 Ank_3: Ankyrin repeat 98.9 1.7E-09 3.8E-14 55.0 3.9 28 35-62 2-29 (30)
95 PF13606 Ank_3: Ankyrin repeat 98.9 4.2E-09 9.1E-14 53.6 3.9 27 107-133 2-28 (30)
96 KOG0782 Predicted diacylglycer 98.8 9.3E-09 2E-13 84.9 6.8 117 39-165 870-988 (1004)
97 PF00023 Ank: Ankyrin repeat H 98.8 1.3E-08 2.9E-13 53.1 4.3 30 35-64 2-31 (33)
98 PF00023 Ank: Ankyrin repeat H 98.8 1.6E-08 3.5E-13 52.7 4.3 27 107-133 2-28 (33)
99 KOG0818 GTPase-activating prot 98.8 2.8E-08 6E-13 80.8 7.2 77 75-154 136-212 (669)
100 KOG0506 Glutaminase (contains 98.7 1.7E-08 3.7E-13 81.7 4.5 96 69-169 503-598 (622)
101 KOG0522 Ankyrin repeat protein 98.6 9.9E-08 2.2E-12 78.3 7.6 87 37-129 22-110 (560)
102 KOG0782 Predicted diacylglycer 98.6 9.5E-08 2.1E-12 79.1 6.3 100 26-129 890-989 (1004)
103 KOG3609 Receptor-activated Ca2 98.6 2E-07 4.3E-12 80.5 7.9 119 4-133 29-157 (822)
104 KOG0522 Ankyrin repeat protein 98.5 3.6E-07 7.8E-12 75.0 7.3 67 24-94 44-110 (560)
105 KOG0511 Ankyrin repeat protein 98.5 5.7E-07 1.2E-11 71.2 7.3 75 36-117 37-111 (516)
106 KOG2384 Major histocompatibili 98.5 1E-06 2.2E-11 63.5 7.8 83 27-113 4-87 (223)
107 KOG0521 Putative GTPase activa 98.4 3.2E-07 7E-12 80.6 5.5 80 70-153 654-733 (785)
108 KOG0511 Ankyrin repeat protein 98.4 3.8E-06 8.1E-11 66.7 10.0 73 73-150 37-109 (516)
109 KOG0705 GTPase-activating prot 98.4 1.4E-06 3E-11 72.4 7.1 67 30-100 656-722 (749)
110 KOG0521 Putative GTPase activa 98.2 1.2E-06 2.6E-11 77.1 3.9 99 23-127 644-742 (785)
111 KOG2384 Major histocompatibili 98.2 9.2E-06 2E-10 58.7 7.6 69 58-132 2-71 (223)
112 KOG0520 Uncharacterized conser 98.1 4.3E-06 9.2E-11 73.9 5.3 130 28-166 567-702 (975)
113 KOG3609 Receptor-activated Ca2 97.4 0.00045 9.9E-09 60.3 7.2 123 32-169 22-156 (822)
114 KOG0520 Uncharacterized conser 97.4 0.00018 3.9E-09 64.0 4.2 96 29-129 602-702 (975)
115 smart00248 ANK ankyrin repeats 97.4 0.00045 9.8E-09 33.4 3.9 27 35-61 2-28 (30)
116 KOG2505 Ankyrin repeat protein 97.3 0.001 2.3E-08 54.9 7.6 64 85-150 404-471 (591)
117 smart00248 ANK ankyrin repeats 97.1 0.0011 2.5E-08 31.8 4.0 26 107-132 2-27 (30)
118 KOG2505 Ankyrin repeat protein 97.0 0.0014 3.1E-08 54.1 4.9 67 47-115 403-471 (591)
119 PF06128 Shigella_OspC: Shigel 94.7 0.26 5.6E-06 37.2 7.6 92 36-132 180-279 (284)
120 PF11929 DUF3447: Domain of un 92.6 0.32 7E-06 30.1 4.5 47 37-94 8-54 (76)
121 PF06128 Shigella_OspC: Shigel 91.4 0.53 1.2E-05 35.6 5.0 52 46-98 228-280 (284)
122 PF11929 DUF3447: Domain of un 91.2 0.61 1.3E-05 28.9 4.5 47 74-129 8-54 (76)
123 PF03158 DUF249: Multigene fam 89.9 1.8 4E-05 31.6 6.5 111 34-163 75-189 (192)
124 PF03158 DUF249: Multigene fam 80.2 4.7 0.0001 29.6 4.7 46 75-128 146-191 (192)
125 KOG1709 Guanidinoacetate methy 34.5 41 0.00089 25.7 2.6 37 26-62 6-42 (271)
126 KOG4591 Uncharacterized conser 29.1 56 0.0012 24.6 2.5 49 69-117 219-270 (280)
127 KOG1709 Guanidinoacetate methy 26.1 63 0.0014 24.8 2.3 39 55-97 2-40 (271)
128 KOG0513 Ca2+-independent phosp 25.5 48 0.001 28.7 1.8 116 28-152 48-179 (503)
129 KOG3836 HLH transcription fact 23.5 19 0.00042 31.4 -0.8 26 31-56 425-450 (605)
130 KOG1595 CCCH-type Zn-finger pr 23.1 10 0.00022 32.5 -2.5 90 72-167 58-155 (528)
131 PF04053 Coatomer_WDAD: Coatom 20.2 3.3E+02 0.0072 23.2 5.8 78 35-129 321-398 (443)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=4.2e-28 Score=170.65 Aligned_cols=131 Identities=36% Similarity=0.529 Sum_probs=85.8
Q ss_pred hhcccCC-CCChHHHHHHHcCCHHHHHHHHH-CCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHc-CCCCCcccC
Q 028370 27 SVIDTDD-RGWTPLHIGARKGDIKLVKQLLD-EGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLER-GADIDARTK 103 (210)
Q Consensus 27 ~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~ 103 (210)
+++.++. +|+|||||||..|+.+++.+|++ .+..++-+ |..||||||+|+..|+.++|+.|+.+ |++++..+.
T Consensus 29 SL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddk----DdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn 104 (226)
T KOG4412|consen 29 SLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDK----DDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTN 104 (226)
T ss_pred hhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCc----cccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecC
Confidence 4444444 67777777777777777777773 34444444 66677777777777777777777766 677766666
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 104 GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 104 ~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
. |.||||||+..|+++|+++|+++|+.+ +++|..|+||||-|+..+. .+++++|....
T Consensus 105 ~--G~T~LHyAagK~r~eIaqlLle~ga~i--~~kD~~~qtplHRAAavGk--lkvie~Li~~~ 162 (226)
T KOG4412|consen 105 G--GQTCLHYAAGKGRLEIAQLLLEKGALI--RIKDKQGQTPLHRAAAVGK--LKVIEYLISQG 162 (226)
T ss_pred C--CcceehhhhcCChhhHHHHHHhcCCCC--cccccccCchhHHHHhccc--hhhHHHHHhcC
Confidence 5 677777777777777777777777644 6677777777776664433 56666665554
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=5.6e-27 Score=165.00 Aligned_cols=130 Identities=41% Similarity=0.570 Sum_probs=116.1
Q ss_pred hcccCCCCChHHHHHHHcCCHHHHHHHHHC-CCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCC
Q 028370 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDE-GMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGAC 106 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 106 (210)
++.+|..|+||||.|+..|+.++|+.|+.+ |++++.. +..|.|+||+|+..|..+++++|++.|+.++.+|..
T Consensus 65 ~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~----tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~-- 138 (226)
T KOG4412|consen 65 PDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNAT----TNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQ-- 138 (226)
T ss_pred CCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCccee----cCCCcceehhhhcCChhhHHHHHHhcCCCCcccccc--
Confidence 567899999999999999999999999988 9999998 899999999999999999999999999999988877
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 107 GWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 107 g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
|.||||.|+.-|.++++++|+..|+.+ +..|..|+||||+|..-+ ..+...+|.+..
T Consensus 139 ~qtplHRAAavGklkvie~Li~~~a~~--n~qDk~G~TpL~~al~e~--~~d~a~lLV~~g 195 (226)
T KOG4412|consen 139 GQTPLHRAAAVGKLKVIEYLISQGAPL--NTQDKYGFTPLHHALAEG--HPDVAVLLVRAG 195 (226)
T ss_pred cCchhHHHHhccchhhHHHHHhcCCCC--CcccccCccHHHHHHhcc--CchHHHHHHHhc
Confidence 999999999999999999999999955 999999999999995333 344544454443
No 3
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.93 E-value=1.8e-25 Score=183.35 Aligned_cols=170 Identities=29% Similarity=0.385 Sum_probs=137.0
Q ss_pred hhccchhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHH
Q 028370 7 HEQLGPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLE 86 (210)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 86 (210)
..++|.+..++..-... ..+.+++|.+|.|+||||+.+++++++++|+++|+++|... ...+.||||||+++|+..
T Consensus 51 A~q~G~l~~v~~lve~~-g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~g---G~l~stPLHWAar~G~~~ 126 (600)
T KOG0509|consen 51 ATQYGELETVKELVESE-GESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIG---GVLGSTPLHWAARNGHIS 126 (600)
T ss_pred HhhcchHHHHHHHHhhc-CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccC---CCCCCCcchHHHHcCcHH
Confidence 34567777666555444 88899999999999999999999999999999999999873 367899999999999999
Q ss_pred HHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 87 VMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 87 ~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
+|.+|+++|+++++.|.. |.+|+|.|++.|+.-.|-+|+.+|+++ +.+|.+|.|||+||+..+.... +.+|...
T Consensus 127 vv~lLlqhGAdpt~~D~~--G~~~lHla~~~~~~~~vayll~~~~d~--d~~D~~grTpLmwAaykg~~~~--v~~LL~f 200 (600)
T KOG0509|consen 127 VVDLLLQHGADPTLKDKQ--GLTPLHLAAQFGHTALVAYLLSKGADI--DLRDNNGRTPLMWAAYKGFALF--VRRLLKF 200 (600)
T ss_pred HHHHHHHcCCCCceecCC--CCcHHHHHHHhCchHHHHHHHHhcccC--CCcCCCCCCHHHHHHHhcccHH--HHHHHHh
Confidence 999999999999999888 999999999999999999999999855 9999999999999996665432 3333333
Q ss_pred hhcCCCCccHHHHHHHhHHH
Q 028370 167 FSAGETSYSSEKLNALSRLL 186 (210)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~ 186 (210)
...........+.+++.++.
T Consensus 201 ~a~~~~~d~~~g~TpLHwa~ 220 (600)
T KOG0509|consen 201 GASLLLTDDNHGNTPLHWAV 220 (600)
T ss_pred cccccccccccCCchHHHHH
Confidence 22222222234445555443
No 4
>PHA02791 ankyrin-like protein; Provisional
Probab=99.91 E-value=3.1e-23 Score=161.91 Aligned_cols=125 Identities=20% Similarity=0.221 Sum_probs=83.9
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCCh
Q 028370 30 DTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWT 109 (210)
Q Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~t 109 (210)
.+|..|.||||+|+..|+.++++.|++.|++++.. + +.||||+|+..|+.+++++|++.|++++.++.. |.|
T Consensus 25 ~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~----d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~--G~T 96 (284)
T PHA02791 25 KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLL----E--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDK--GNT 96 (284)
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCC----C--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC--CCC
Confidence 46677777777777777777777777777666543 2 467777777777777777777777777766655 777
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCC-CCcccccccchHHHHHHHHHhhhh
Q 028370 110 PLHTAAKERKKEAVRFLIENGAFLPDDINDSRF-NPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 110 pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g-~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|||+|+..|+.+++++|+++|+++ +.++..| .||||+|+.. +..+++++|.+.
T Consensus 97 pLh~Aa~~g~~eivk~Ll~~gadi--n~~~~~g~~TpL~~Aa~~--g~~eivk~LL~~ 150 (284)
T PHA02791 97 ALYYAVDSGNMQTVKLFVKKNWRL--MFYGKTGWKTSFYHAVML--NDVSIVSYFLSE 150 (284)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCc--CccCCCCCcHHHHHHHHc--CCHHHHHHHHhc
Confidence 777777777777777777777754 4555555 4677777633 335666666554
No 5
>PHA02791 ankyrin-like protein; Provisional
Probab=99.90 E-value=9e-23 Score=159.33 Aligned_cols=130 Identities=16% Similarity=0.131 Sum_probs=86.6
Q ss_pred hhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCC-CcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKG-VTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g-~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
+++.+|..|+||||+|+..|+.+++++|+++|++++.. +..| .||||+|+..|+.+++++|++.+++.. +. .
T Consensus 86 dvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~----~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~--d~-~ 158 (284)
T PHA02791 86 DDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFY----GKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF--DL-A 158 (284)
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcc----CCCCCcHHHHHHHHcCCHHHHHHHHhcCCccc--cc-c
Confidence 34556677777777777777777777777777776655 5555 367777777777777777777654321 11 1
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCc-ccccccchHHHHHHHHHhhhhh
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPP-LHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~-l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
.|.||||+|+..|+.+++++|+++|+++ +.++..|.|| ||+|+.. +..+++++|....
T Consensus 159 ~g~TpLh~Aa~~g~~eiv~lLL~~gAd~--n~~d~~g~t~~L~~Aa~~--~~~e~v~lLl~~G 217 (284)
T PHA02791 159 ILLSCIHITIKNGHVDMMILLLDYMTST--NTNNSLLFIPDIKLAIDN--KDLEMLQALFKYD 217 (284)
T ss_pred cCccHHHHHHHcCCHHHHHHHHHCCCCC--CcccCCCCChHHHHHHHc--CCHHHHHHHHHCC
Confidence 2667777777777777777777777754 6666777765 7777743 3467777776553
No 6
>PHA02741 hypothetical protein; Provisional
Probab=99.90 E-value=6.5e-23 Score=149.44 Aligned_cols=133 Identities=26% Similarity=0.376 Sum_probs=114.6
Q ss_pred hhcccCCCCChHHHHHHHcCCHHHHHHHHH------CCCCccccccCCCCCCCcHHHHHHHCCc----HHHHHHHHHcCC
Q 028370 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLD------EGMDVNVAAWGPKSKGVTPLHLAAQGGH----LEVMDVLLERGA 96 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~ 96 (210)
.++.+|..|.||||+|++.|+.++++.|+. .|++++.. |..|.||||+|+..|+ .+++++|++.|+
T Consensus 13 ~~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~----d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~ga 88 (169)
T PHA02741 13 MIAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNAT----DDAGQMCIHIAAEKHEAQLAAEIIDHLIELGA 88 (169)
T ss_pred HhhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhcc----CCCCCcHHHHHHHcCChHHHHHHHHHHHHcCC
Confidence 456789999999999999999999999854 35777777 8899999999999998 588999999999
Q ss_pred CCCcccC-CCCCChHHHHHHhcCCHHHHHHHHH-cCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 97 DIDARTK-GACGWTPLHTAAKERKKEAVRFLIE-NGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 97 ~~~~~~~-~~~g~tpL~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
+++.++. . |.||||+|+..++.+++++|+. .|+++ +.+|..|.|||++|+..+ ..+++++|......
T Consensus 89 din~~~~~~--g~TpLh~A~~~~~~~iv~~Ll~~~g~~~--~~~n~~g~tpL~~A~~~~--~~~iv~~L~~~~~~ 157 (169)
T PHA02741 89 DINAQEMLE--GDTALHLAAHRRDHDLAEWLCCQPGIDL--HFCNADNKSPFELAIDNE--DVAMMQILREIVAT 157 (169)
T ss_pred CCCCCCcCC--CCCHHHHHHHcCCHHHHHHHHhCCCCCC--CcCCCCCCCHHHHHHHCC--CHHHHHHHHHHHHH
Confidence 9998864 5 9999999999999999999998 58855 889999999999999544 46888887766443
No 7
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.89 E-value=4.4e-22 Score=149.73 Aligned_cols=134 Identities=21% Similarity=0.257 Sum_probs=113.7
Q ss_pred hhhcccCCCCChHHHHHHHcC--CHHHHHHHHHCCCCccccccCCC-CCCCcHHHHHHHC---CcHHHHHHHHHcCCCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKG--DIKLVKQLLDEGMDVNVAAWGPK-SKGVTPLHLAAQG---GHLEVMDVLLERGADID 99 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g--~~~~v~~Ll~~g~~~~~~~~~~~-~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~ 99 (210)
...+.+|..|.||||.|+.++ +.+++++|+++|++++.. + ..|.||||+|+.. ++.+++++|+++|++++
T Consensus 42 ~~~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~----~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin 117 (209)
T PHA02859 42 KFVNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFK----TRDNNLSALHHYLSFNKNVEPEILKILIDSGSSIT 117 (209)
T ss_pred HhhhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCcc----CCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCC
Confidence 346778999999999999865 899999999999999987 5 5799999998763 47999999999999999
Q ss_pred cccCCCCCChHHHHHHh--cCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 100 ARTKGACGWTPLHTAAK--ERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 100 ~~~~~~~g~tpL~~A~~--~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
..+.+ |.||||+|+. .++.+++++|++.|+++ +.+|..|.||||.++. ..+..+++++|.+...
T Consensus 118 ~~d~~--G~TpLh~a~~~~~~~~~iv~~Li~~gadi--n~~d~~g~t~Lh~~a~-~~~~~~iv~~Ll~~Ga 183 (209)
T PHA02859 118 EEDED--GKNLLHMYMCNFNVRINVIKLLIDSGVSF--LNKDFDNNNILYSYIL-FHSDKKIFDFLTSLGI 183 (209)
T ss_pred CcCCC--CCCHHHHHHHhccCCHHHHHHHHHcCCCc--ccccCCCCcHHHHHHH-hcCCHHHHHHHHHcCC
Confidence 98877 9999999876 46899999999999966 8899999999996432 2235788888887643
No 8
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.89 E-value=3.5e-22 Score=164.97 Aligned_cols=127 Identities=31% Similarity=0.390 Sum_probs=87.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHH
Q 028370 34 RGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHT 113 (210)
Q Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~ 113 (210)
.+.||||.|+..|+.++++.|++.|+..+... +..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+
T Consensus 67 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~---~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~--g~tpLh~ 141 (413)
T PHA02875 67 DIESELHDAVEEGDVKAVEELLDLGKFADDVF---YKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTD--KFSPLHL 141 (413)
T ss_pred CcccHHHHHHHCCCHHHHHHHHHcCCcccccc---cCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCC--CCCHHHH
Confidence 34444444444444444444444443332111 456788888888888888888888888888877766 8888888
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 114 AAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 114 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
|+..|+.+++++|+++|+++ +.+|..|.||||+|+..+ ..+++++|.+....
T Consensus 142 A~~~~~~~~v~~Ll~~g~~~--~~~d~~g~TpL~~A~~~g--~~eiv~~Ll~~ga~ 193 (413)
T PHA02875 142 AVMMGDIKGIELLIDHKACL--DIEDCCGCTPLIIAMAKG--DIAICKMLLDSGAN 193 (413)
T ss_pred HHHcCCHHHHHHHHhcCCCC--CCCCCCCCCHHHHHHHcC--CHHHHHHHHhCCCC
Confidence 88888888888888888855 777888888888888443 46777777765433
No 9
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.88 E-value=5.3e-22 Score=163.93 Aligned_cols=128 Identities=23% Similarity=0.361 Sum_probs=114.9
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChH
Q 028370 31 TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTP 110 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tp 110 (210)
.+..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++|++++..+.. |.||
T Consensus 98 ~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~----~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~--g~Tp 171 (413)
T PHA02875 98 FYKDGMTPLHLATILKKLDIMKLLIARGADPDIP----NTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCC--GCTP 171 (413)
T ss_pred ccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC--CCCH
Confidence 4567999999999999999999999999999988 899999999999999999999999999999988877 9999
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCC-CCcccccccchHHHHHHHHHhhhhhh
Q 028370 111 LHTAAKERKKEAVRFLIENGAFLPDDINDSRF-NPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 111 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g-~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
||+|+..|+.+++++|+++|+++ +..+..| .||+++|+.. +..+++++|.+...
T Consensus 172 L~~A~~~g~~eiv~~Ll~~ga~~--n~~~~~~~~t~l~~A~~~--~~~~iv~~Ll~~ga 226 (413)
T PHA02875 172 LIIAMAKGDIAICKMLLDSGANI--DYFGKNGCVAALCYAIEN--NKIDIVRLFIKRGA 226 (413)
T ss_pred HHHHHHcCCHHHHHHHHhCCCCC--CcCCCCCCchHHHHHHHc--CCHHHHHHHHHCCc
Confidence 99999999999999999999976 6666666 5889989854 45788888887643
No 10
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.87 E-value=1.8e-21 Score=163.55 Aligned_cols=129 Identities=29% Similarity=0.402 Sum_probs=85.4
Q ss_pred hhhcccCCC-CChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCC
Q 028370 26 RSVIDTDDR-GWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKG 104 (210)
Q Consensus 26 ~~~~~~d~~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 104 (210)
.+++.+|.. |.||||+|+..|+.+++++|+++|++++.. +..|.||||.|+..++.+++++|++.|++++.++..
T Consensus 158 adin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~----d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~ 233 (477)
T PHA02878 158 ADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIP----DKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKC 233 (477)
T ss_pred CCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCc----CCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCC
Confidence 344556666 777777777777777777777777777666 666777777777777777777777777777766655
Q ss_pred CCCChHHHHHHhc-CCHHHHHHHHHcCCCCCCCCCCC-CCCCcccccccchHHHHHHHHHhhhh
Q 028370 105 ACGWTPLHTAAKE-RKKEAVRFLIENGAFLPDDINDS-RFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 105 ~~g~tpL~~A~~~-g~~~~v~~Ll~~g~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|.||||+|+.. ++.+++++|+++|+++ +.++. .|.||||+|+. ..+++++|.+.
T Consensus 234 --g~TpLh~A~~~~~~~~iv~~Ll~~gadv--n~~~~~~g~TpLh~A~~----~~~~v~~Ll~~ 289 (477)
T PHA02878 234 --GNTPLHISVGYCKDYDILKLLLEHGVDV--NAKSYILGLTALHSSIK----SERKLKLLLEY 289 (477)
T ss_pred --CCCHHHHHHHhcCCHHHHHHHHHcCCCC--CccCCCCCCCHHHHHcc----CHHHHHHHHHC
Confidence 77777777654 5677777777777754 44443 56777777742 13555555554
No 11
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.87 E-value=8.2e-22 Score=143.14 Aligned_cols=130 Identities=22% Similarity=0.286 Sum_probs=110.3
Q ss_pred hcccCCCCChHHHHHHHcCCH----HHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHH---HHHHHHHcCCCCCc
Q 028370 28 VIDTDDRGWTPLHIGARKGDI----KLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLE---VMDVLLERGADIDA 100 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~g~~----~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~---~v~~Ll~~g~~~~~ 100 (210)
.+..+.++.++||.||+.|+. +++++|++.|++++.. |..|+||||+|+..|+.+ ++++|++.|++++.
T Consensus 13 ~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~----d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~ 88 (166)
T PHA02743 13 AVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRY----DHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA 88 (166)
T ss_pred HhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhcc----CCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence 455778889999999999998 5666777888888877 889999999999998865 47999999999998
Q ss_pred cc-CCCCCChHHHHHHhcCCHHHHHHHHH-cCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 101 RT-KGACGWTPLHTAAKERKKEAVRFLIE-NGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 101 ~~-~~~~g~tpL~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
++ .. |.||||+|+..|+.+++++|++ .|+++ +.++..|.||||+|+..+ ..+++++|....
T Consensus 89 ~d~~~--g~TpLh~A~~~g~~~iv~~Ll~~~gad~--~~~d~~g~tpL~~A~~~~--~~~iv~~Ll~~g 151 (166)
T PHA02743 89 RELGT--GNTLLHIAASTKNYELAEWLCRQLGVNL--GAINYQHETAYHIAYKMR--DRRMMEILRANG 151 (166)
T ss_pred CCCCC--CCcHHHHHHHhCCHHHHHHHHhccCCCc--cCcCCCCCCHHHHHHHcC--CHHHHHHHHHcC
Confidence 86 35 9999999999999999999995 79865 789999999999998544 467888887654
No 12
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.87 E-value=1.8e-21 Score=161.66 Aligned_cols=120 Identities=29% Similarity=0.457 Sum_probs=108.7
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
.+++.+|..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..++.+++++|++.|++++..+..
T Consensus 115 ~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~----d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~- 189 (434)
T PHA02874 115 IDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIE----DDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNN- 189 (434)
T ss_pred CCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCc----CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCC-
Confidence 345678899999999999999999999999999999988 899999999999999999999999999999988777
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccch
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLE 153 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~ 153 (210)
|.||||+|+..|+.+++++|++.|+++ ..++..|.||||+|+..+
T Consensus 190 -g~tpL~~A~~~g~~~iv~~Ll~~g~~i--~~~~~~g~TpL~~A~~~~ 234 (434)
T PHA02874 190 -GESPLHNAAEYGDYACIKLLIDHGNHI--MNKCKNGFTPLHNAIIHN 234 (434)
T ss_pred -CCCHHHHHHHcCCHHHHHHHHhCCCCC--cCCCCCCCCHHHHHHHCC
Confidence 999999999999999999999999965 677778888888887543
No 13
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.87 E-value=9.1e-22 Score=165.28 Aligned_cols=118 Identities=26% Similarity=0.400 Sum_probs=107.3
Q ss_pred hhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHC-CcHHHHHHHHHcCCCCCcccC
Q 028370 25 FRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQG-GHLEVMDVLLERGADIDARTK 103 (210)
Q Consensus 25 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~~ 103 (210)
..+++.+|..|.||||.|++.|+.++++.|++.|++++.. |..|.||||+|+.. ++.+++++|++.|++++..+.
T Consensus 191 gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~----d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~ 266 (477)
T PHA02878 191 GANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDAR----DKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSY 266 (477)
T ss_pred CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCC----CCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCC
Confidence 3566778999999999999999999999999999999988 99999999999975 789999999999999998865
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCccccccc
Q 028370 104 GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPS 151 (210)
Q Consensus 104 ~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~ 151 (210)
. .|.||||+| .++.+++++|+++|+++ +..|..|.|||++|+.
T Consensus 267 ~-~g~TpLh~A--~~~~~~v~~Ll~~gadi--n~~d~~g~TpL~~A~~ 309 (477)
T PHA02878 267 I-LGLTALHSS--IKSERKLKLLLEYGADI--NSLNSYKLTPLSSAVK 309 (477)
T ss_pred C-CCCCHHHHH--ccCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHH
Confidence 2 299999999 57789999999999966 8999999999999985
No 14
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.87 E-value=4e-22 Score=163.82 Aligned_cols=132 Identities=39% Similarity=0.478 Sum_probs=115.4
Q ss_pred hhhhcccC-CCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccC
Q 028370 25 FRSVIDTD-DRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTK 103 (210)
Q Consensus 25 ~~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 103 (210)
..++|... .-+.||||||+++|+..++..|+++|+|++.. |.+|.+|+|.|+..|+..+|-+|+.+|+++|.+|.
T Consensus 101 gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~----D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~ 176 (600)
T KOG0509|consen 101 GADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLK----DKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDN 176 (600)
T ss_pred CCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCcee----cCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCC
Confidence 34566666 56889999999999999999999999999999 99999999999999999999999999999999998
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCC-CCCCCcccccccchHHHHHHHHHhhhh
Q 028370 104 GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDIND-SRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 104 ~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
+ |+|||++|+..|....++.|++.|+.+ ..+| .+|.||||||+..++ ...+.++.+.
T Consensus 177 ~--grTpLmwAaykg~~~~v~~LL~f~a~~--~~~d~~~g~TpLHwa~~~gN--~~~v~Ll~~g 234 (600)
T KOG0509|consen 177 N--GRTPLMWAAYKGFALFVRRLLKFGASL--LLTDDNHGNTPLHWAVVGGN--LTAVKLLLEG 234 (600)
T ss_pred C--CCCHHHHHHHhcccHHHHHHHHhcccc--cccccccCCchHHHHHhcCC--cceEehhhhc
Confidence 8 999999999999988799999999966 5555 999999999985443 4444455444
No 15
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.87 E-value=1.9e-21 Score=136.35 Aligned_cols=145 Identities=26% Similarity=0.415 Sum_probs=113.6
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDV 90 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (210)
+.+..+++.+++. ...++.+|.+|.||||.|+++|+.+++..|+..|++++.+ ...|+||||.||.-.+.+++.+
T Consensus 74 nrl~eV~~lL~e~-an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~----T~~GWTPLhSAckWnN~~va~~ 148 (228)
T KOG0512|consen 74 NRLTEVQRLLSEK-ANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAK----TNEGWTPLHSACKWNNFEVAGR 148 (228)
T ss_pred ccHHHHHHHHHhc-cccccccccccccHHHHHHhcCchHHHHHHHHccCCcccc----cccCccchhhhhcccchhHHHH
Confidence 5566666666654 4567889999999999999999999999999999999888 7889999999999999999999
Q ss_pred HHHcCCCCCcccCCCCCChHHHHHHhcCC-HHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhh
Q 028370 91 LLERGADIDARTKGACGWTPLHTAAKERK-KEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQR 164 (210)
Q Consensus 91 Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~-~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~ 164 (210)
|+++|+|+++.+.. ..||||.|+.+.+ ...+++|+.... +....++..+.||+.+|... .....+.+...
T Consensus 149 LLqhgaDVnA~t~g--~ltpLhlaa~~rn~r~t~~~Ll~dry-i~pg~~nn~eeta~~iARRT-~~s~~lfe~~e 219 (228)
T KOG0512|consen 149 LLQHGADVNAQTKG--LLTPLHLAAGNRNSRDTLELLLHDRY-IHPGLKNNLEETAFDIARRT-SMSHYLFEIVE 219 (228)
T ss_pred HHhccCcccccccc--cchhhHHhhcccchHHHHHHHhhccc-cChhhhcCccchHHHHHHHh-hhhHHHHHHHH
Confidence 99999999988877 7799999988766 455677776655 45677888889999988632 22344444433
No 16
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.87 E-value=3.7e-22 Score=158.92 Aligned_cols=142 Identities=29% Similarity=0.423 Sum_probs=124.5
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDV 90 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (210)
|.+..++...++. .+.|.......|||-.||.-|+++++++|+++|+|+++. |+.|.|.||+||..|+.+|+++
T Consensus 95 GHl~vVk~L~~~g--a~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~Ia----nrhGhTcLmIa~ykGh~~I~qy 168 (615)
T KOG0508|consen 95 GHLEVVKLLLRRG--ASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIA----NRHGHTCLMIACYKGHVDIAQY 168 (615)
T ss_pred CcHHHHHHHHHhc--CccccccccCCccHHHHHhcchhHHHHHHHHcCCCCccc----ccCCCeeEEeeeccCchHHHHH
Confidence 5566666665555 667777778889999999999999999999999999999 9999999999999999999999
Q ss_pred HHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhh
Q 028370 91 LLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRE 165 (210)
Q Consensus 91 Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~ 165 (210)
|++.|+|++.++.. |+|+||.|+.+|+++++++|+.+|+.+ ..|..|.|||-.|+ ..+...++.+|..
T Consensus 169 Lle~gADvn~ks~k--GNTALH~caEsG~vdivq~Ll~~ga~i---~~d~~GmtPL~~Aa--~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 169 LLEQGADVNAKSYK--GNTALHDCAESGSVDIVQLLLKHGAKI---DVDGHGMTPLLLAA--VTGHTDIVERLLQ 236 (615)
T ss_pred HHHhCCCcchhccc--CchHHHhhhhcccHHHHHHHHhCCcee---eecCCCCchHHHHh--hhcchHHHHHHhc
Confidence 99999999999887 999999999999999999999999976 35667999999998 4455777777774
No 17
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.87 E-value=6.5e-22 Score=143.63 Aligned_cols=122 Identities=29% Similarity=0.398 Sum_probs=114.3
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
..+|..|++|.|||.||++.|++++|++|++.|+++... .....++|+.|++.|..++|++|+.++.++|..|.+
T Consensus 151 n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~l----gk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwN- 225 (296)
T KOG0502|consen 151 NKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDAL----GKYRESALSLATRGGYTDIVELLLTREVDVNVYDWN- 225 (296)
T ss_pred ccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhh----hhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccC-
Confidence 456789999999999999999999999999999999988 788899999999999999999999999999999998
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHH
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWA 155 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~ 155 (210)
|-|||-+|++.++.+||+.|++.|+++ +..+..|.++++.|+..+..
T Consensus 226 -GgTpLlyAvrgnhvkcve~Ll~sGAd~--t~e~dsGy~~mdlAValGyr 272 (296)
T KOG0502|consen 226 -GGTPLLYAVRGNHVKCVESLLNSGADV--TQEDDSGYWIMDLAVALGYR 272 (296)
T ss_pred -CCceeeeeecCChHHHHHHHHhcCCCc--ccccccCCcHHHHHHHhhhH
Confidence 999999999999999999999999966 89999999999999966543
No 18
>PHA03095 ankyrin-like protein; Provisional
Probab=99.86 E-value=2.6e-21 Score=162.24 Aligned_cols=147 Identities=29% Similarity=0.351 Sum_probs=122.5
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcC---CHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCC-cHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKG---DIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGG-HLE 86 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g---~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~-~~~ 86 (210)
+.+..+...... ..+++.++..|.||||+|+..+ +.++++.|++.|++++.. +..|.||||+|+..+ ..+
T Consensus 25 ~~~~~v~~Ll~~--ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~----~~~g~TpLh~A~~~~~~~~ 98 (471)
T PHA03095 25 VTVEEVRRLLAA--GADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAP----ERCGFTPLHLYLYNATTLD 98 (471)
T ss_pred CCHHHHHHHHHc--CCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHcCCcHH
Confidence 444444444432 4567888999999999999998 999999999999999988 889999999999999 599
Q ss_pred HHHHHHHcCCCCCcccCCCCCChHHHHHH--hcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhh
Q 028370 87 VMDVLLERGADIDARTKGACGWTPLHTAA--KERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQR 164 (210)
Q Consensus 87 ~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~--~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~ 164 (210)
++++|++.|++++..+.. |.||||+|+ ..++.+++++|+++|+++ +..|..|.||||+|+.......++++++.
T Consensus 99 iv~lLl~~ga~in~~~~~--g~tpLh~a~~~~~~~~~iv~~Ll~~gad~--~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll 174 (471)
T PHA03095 99 VIKLLIKAGADVNAKDKV--GRTPLHVYLSGFNINPKVIRLLLRKGADV--NALDLYGMTPLAVLLKSRNANVELLRLLI 174 (471)
T ss_pred HHHHHHHcCCCCCCCCCC--CCCHHHHHhhCCcCCHHHHHHHHHcCCCC--CccCCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence 999999999999988877 999999999 456789999999999965 88899999999988765555567788777
Q ss_pred hhh
Q 028370 165 ESF 167 (210)
Q Consensus 165 ~~~ 167 (210)
+..
T Consensus 175 ~~g 177 (471)
T PHA03095 175 DAG 177 (471)
T ss_pred HcC
Confidence 663
No 19
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.86 E-value=6.6e-21 Score=158.34 Aligned_cols=129 Identities=27% Similarity=0.392 Sum_probs=68.5
Q ss_pred hcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCC----------
Q 028370 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGAD---------- 97 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---------- 97 (210)
++..+..|.||||.|++.|+.+++++|++.|++++.. +..|.||||.|+..|+.+++++|+++|++
T Consensus 28 ~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~----~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~ 103 (434)
T PHA02874 28 INISVDETTTPLIDAIRSGDAKIVELFIKHGADINHI----NTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIE 103 (434)
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCC
Confidence 3445555666666666666666666666666666554 45555555555555555555555544432
Q ss_pred -------------CCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhh
Q 028370 98 -------------IDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQR 164 (210)
Q Consensus 98 -------------~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~ 164 (210)
++..+.. |.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+.. +..+++++|.
T Consensus 104 ~~~i~~ll~~g~d~n~~~~~--g~T~Lh~A~~~~~~~~v~~Ll~~gad~--n~~d~~g~tpLh~A~~~--~~~~iv~~Ll 177 (434)
T PHA02874 104 KDMIKTILDCGIDVNIKDAE--LKTFLHYAIKKGDLESIKMLFEYGADV--NIEDDNGCYPIHIAIKH--NFFDIIKLLL 177 (434)
T ss_pred HHHHHHHHHCcCCCCCCCCC--CccHHHHHHHCCCHHHHHHHHhCCCCC--CCcCCCCCCHHHHHHHC--CcHHHHHHHH
Confidence 2222222 555555555555555555555555533 44555555555555532 2244555554
Q ss_pred hh
Q 028370 165 ES 166 (210)
Q Consensus 165 ~~ 166 (210)
+.
T Consensus 178 ~~ 179 (434)
T PHA02874 178 EK 179 (434)
T ss_pred HC
Confidence 43
No 20
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.86 E-value=2.2e-21 Score=163.05 Aligned_cols=127 Identities=35% Similarity=0.540 Sum_probs=66.8
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCC------CcHHHHHHHCCc--HHHHHHHHHcCCCCCc
Q 028370 29 IDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKG------VTPLHLAAQGGH--LEVMDVLLERGADIDA 100 (210)
Q Consensus 29 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g------~t~L~~A~~~~~--~~~v~~Ll~~g~~~~~ 100 (210)
+.+|..|.||||+|+..|+.+++++|+++|++++.. +..| .||||+|+..++ .+++++|++.|++++.
T Consensus 170 n~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~----~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~ 245 (480)
T PHA03100 170 NAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAG----DIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINI 245 (480)
T ss_pred ccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCC----CCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCC
Confidence 334444555555555555555555555555554444 3344 455555555555 5555555555555555
Q ss_pred ccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhh
Q 028370 101 RTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRE 165 (210)
Q Consensus 101 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~ 165 (210)
++.. |.||||+|+..|+.+++++|+++|+++ +..+..|.||+++|+. .+..++++++.+
T Consensus 246 ~d~~--g~TpL~~A~~~~~~~iv~~Ll~~gad~--n~~d~~g~tpl~~A~~--~~~~~iv~~Ll~ 304 (480)
T PHA03100 246 KDVY--GFTPLHYAVYNNNPEFVKYLLDLGANP--NLVNKYGDTPLHIAIL--NNNKEIFKLLLN 304 (480)
T ss_pred CCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CccCCCCCcHHHHHHH--hCCHHHHHHHHh
Confidence 5444 556666666666666666666666633 5555566666666552 223445554444
No 21
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.86 E-value=3.9e-21 Score=144.59 Aligned_cols=120 Identities=16% Similarity=0.133 Sum_probs=105.6
Q ss_pred hhhhcccC-CCCChHHHHHHHc---CCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHH--CCcHHHHHHHHHcCCCC
Q 028370 25 FRSVIDTD-DRGWTPLHIGARK---GDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQ--GGHLEVMDVLLERGADI 98 (210)
Q Consensus 25 ~~~~~~~d-~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~--~~~~~~v~~Ll~~g~~~ 98 (210)
..+++.++ ..|.||||+|+.. ++.+++++|+++|++++.. +..|.||||+|+. .++.+++++|++.|+++
T Consensus 76 gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~----d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadi 151 (209)
T PHA02859 76 GADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEE----DEDGKNLLHMYMCNFNVRINVIKLLIDSGVSF 151 (209)
T ss_pred CCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCc----CCCCCCHHHHHHHhccCCHHHHHHHHHcCCCc
Confidence 35666676 4799999998764 4799999999999999988 9999999999876 46899999999999999
Q ss_pred CcccCCCCCChHHHH-HHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccc
Q 028370 99 DARTKGACGWTPLHT-AAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSL 152 (210)
Q Consensus 99 ~~~~~~~~g~tpL~~-A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~ 152 (210)
+..+.+ |.||||. |+..++.+++++|+++|+++ +.+|..|.||+++|...
T Consensus 152 n~~d~~--g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi--~~~d~~g~tpl~la~~~ 202 (209)
T PHA02859 152 LNKDFD--NNNILYSYILFHSDKKIFDFLTSLGIDI--NETNKSGYNCYDLIKFR 202 (209)
T ss_pred ccccCC--CCcHHHHHHHhcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHhhh
Confidence 998877 9999996 56688999999999999966 88999999999999843
No 22
>PHA02946 ankyin-like protein; Provisional
Probab=99.86 E-value=2.4e-21 Score=160.82 Aligned_cols=135 Identities=24% Similarity=0.321 Sum_probs=103.1
Q ss_pred hhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCC--cHHHHHHHHHcCCCCCcc-
Q 028370 25 FRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGG--HLEVMDVLLERGADIDAR- 101 (210)
Q Consensus 25 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~- 101 (210)
..+++.+|..|.||||+|++.|+.+++++|+++|++++.. |..|.||||+|+..+ ..+++++|+++|++++..
T Consensus 62 Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~----d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~ 137 (446)
T PHA02946 62 GYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNAC----DKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSV 137 (446)
T ss_pred cCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCC----CCCCCCHHHHHHHcCCchHHHHHHHHHcCCCccccc
Confidence 3567889999999999999999999999999999999988 899999999988765 367788888888777632
Q ss_pred cCC------------------------------CCCChHHHHHHhcCC--HHHHHHHHHcCCCCCCCCCCCCCCCccccc
Q 028370 102 TKG------------------------------ACGWTPLHTAAKERK--KEAVRFLIENGAFLPDDINDSRFNPPLHYC 149 (210)
Q Consensus 102 ~~~------------------------------~~g~tpL~~A~~~g~--~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a 149 (210)
+.. ..|.||||+|+..++ .+++++|+++|+++ +.+|..|.||||+|
T Consensus 138 d~~g~tpL~aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadi--n~~d~~G~TpLH~A 215 (446)
T PHA02946 138 DEEGCGPLLACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISP--SKPDHDGNTPLHIV 215 (446)
T ss_pred CCCCCcHHHHHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCC--cccCCCCCCHHHHH
Confidence 221 226666666655433 57778888888855 77788888888888
Q ss_pred ccchHHHHHHHHHhhh
Q 028370 150 PSLEWAYEEMMRFQRE 165 (210)
Q Consensus 150 ~~~~~~~~~~~~~l~~ 165 (210)
+..+....++++++.+
T Consensus 216 a~~~~~~~~iv~lLl~ 231 (446)
T PHA02946 216 CSKTVKNVDIINLLLP 231 (446)
T ss_pred HHcCCCcHHHHHHHHc
Confidence 8654344667776664
No 23
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.86 E-value=9.8e-21 Score=148.15 Aligned_cols=125 Identities=16% Similarity=0.235 Sum_probs=107.1
Q ss_pred HhhhhcccCCCCChH-HHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCccc
Q 028370 24 FFRSVIDTDDRGWTP-LHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDART 102 (210)
Q Consensus 24 ~~~~~~~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 102 (210)
|.-.+..+|..|+|+ ||.|++.|+.++++.|+++|++++......+..|.||||+|+..++.+++++|+++|++++..+
T Consensus 21 ~~~~~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~ 100 (300)
T PHA02884 21 FYIAIKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYA 100 (300)
T ss_pred HHHHhhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCccc
Confidence 334466789988875 6777888999999999999999987510003579999999999999999999999999999754
Q ss_pred -CCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccc
Q 028370 103 -KGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSL 152 (210)
Q Consensus 103 -~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~ 152 (210)
.. |.||||+|+..|+.+++++|+++|+++ +.++..|.||+++|+..
T Consensus 101 ~~~--g~TpLh~Aa~~~~~eivklLL~~GAdi--n~kd~~G~TpL~~A~~~ 147 (300)
T PHA02884 101 EEA--KITPLYISVLHGCLKCLEILLSYGADI--NIQTNDMVTPIELALMI 147 (300)
T ss_pred CCC--CCCHHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHh
Confidence 34 899999999999999999999999966 88999999999999853
No 24
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.86 E-value=8.7e-21 Score=159.46 Aligned_cols=132 Identities=33% Similarity=0.507 Sum_probs=93.7
Q ss_pred hhcccCCCCChHHHHHHHcC--CHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCC
Q 028370 27 SVIDTDDRGWTPLHIGARKG--DIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKG 104 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g--~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 104 (210)
+++.+|..|.||||.|+..| +.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 133 ~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~----d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 208 (480)
T PHA03100 133 NVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAK----NRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIE 208 (480)
T ss_pred CCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccc----cCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCC
Confidence 44556667777777777777 777777777777777666 667777777777777777777777777777666554
Q ss_pred CCC------ChHHHHHHhcCC--HHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 105 ACG------WTPLHTAAKERK--KEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 105 ~~g------~tpL~~A~~~g~--~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
| .||||.|+..|+ .+++++|+++|+++ +.+|..|.||||+|+..+ ..+++++|.+...
T Consensus 209 --~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~di--n~~d~~g~TpL~~A~~~~--~~~iv~~Ll~~ga 274 (480)
T PHA03100 209 --TLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPI--NIKDVYGFTPLHYAVYNN--NPEFVKYLLDLGA 274 (480)
T ss_pred --CCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcC--CHHHHHHHHHcCC
Confidence 5 677777777777 77777777777754 677788888888887443 3677777776544
No 25
>PHA02798 ankyrin-like protein; Provisional
Probab=99.85 E-value=5.5e-21 Score=160.97 Aligned_cols=133 Identities=21% Similarity=0.343 Sum_probs=97.6
Q ss_pred hhhhcccCCCCChHHHHHHHcC---CHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCc---HHHHHHHHHcCCCC
Q 028370 25 FRSVIDTDDRGWTPLHIGARKG---DIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGH---LEVMDVLLERGADI 98 (210)
Q Consensus 25 ~~~~~~~d~~g~t~L~~A~~~g---~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~ 98 (210)
..+++.+|..|.||||+|+.++ +.+++++|+++|++++.. +..|.||||+|+..++ .+++++|++.|+++
T Consensus 99 GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~----d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadi 174 (489)
T PHA02798 99 GADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLL----DKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDI 174 (489)
T ss_pred CCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCcccc----CCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCc
Confidence 4556778888888888888775 678888888888888877 7888888888888776 77777777777665
Q ss_pred Cccc---------------------------------------------------------------------------C
Q 028370 99 DART---------------------------------------------------------------------------K 103 (210)
Q Consensus 99 ~~~~---------------------------------------------------------------------------~ 103 (210)
+..+ .
T Consensus 175 n~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~ 254 (489)
T PHA02798 175 NTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQV 254 (489)
T ss_pred ccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCc
Confidence 4331 1
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhh
Q 028370 104 GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRE 165 (210)
Q Consensus 104 ~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~ 165 (210)
+..|.||||+|+..|+.+++++|+++|+++ +..+..|.|||++|+..+ ..++++.+.+
T Consensus 255 d~~G~TPL~~A~~~~~~~~v~~LL~~GAdi--n~~d~~G~TpL~~A~~~~--~~~iv~~lL~ 312 (489)
T PHA02798 255 DELGFNPLYYSVSHNNRKIFEYLLQLGGDI--NIITELGNTCLFTAFENE--SKFIFNSILN 312 (489)
T ss_pred CcCCccHHHHHHHcCcHHHHHHHHHcCCcc--cccCCCCCcHHHHHHHcC--cHHHHHHHHc
Confidence 123778888888888888888888888855 778888888888887433 3555555543
No 26
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.85 E-value=2.8e-21 Score=138.75 Aligned_cols=130 Identities=25% Similarity=0.315 Sum_probs=102.5
Q ss_pred hcccCCCCChHHHHHHHcCCHHHHHHHHHCCCC-----ccccccCCCCCCCcHHHHHHHCCcH---HHHHHHHHcCCCCC
Q 028370 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMD-----VNVAAWGPKSKGVTPLHLAAQGGHL---EVMDVLLERGADID 99 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g~~~~ 99 (210)
.+.+|..|.||||+|++.|+...+........+ +... |..|.||||+|+..++. +++++|++.|++++
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~----d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin 85 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEY----NRHGKQCVHIVSNPDKADPQEKLKLLMEWGADIN 85 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHh----cCCCCEEEEeecccCchhHHHHHHHHHHcCCCcc
Confidence 456899999999999999984322222121112 1223 78899999999999986 46899999999999
Q ss_pred cccC-CCCCChHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 100 ARTK-GACGWTPLHTAAKERKKEAVRFLIEN-GAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 100 ~~~~-~~~g~tpL~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
.++. . |.||||+|+..|+.+++++|+.. |+++ +.++..|.||||+|+.. +..+++++|....
T Consensus 86 ~~~~~~--g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~--n~~~~~g~tpL~~A~~~--~~~~i~~~Ll~~g 149 (154)
T PHA02736 86 GKERVF--GNTPLHIAVYTQNYELATWLCNQPGVNM--EILNYAFKTPYYVACER--HDAKMMNILRAKG 149 (154)
T ss_pred ccCCCC--CCcHHHHHHHhCCHHHHHHHHhCCCCCC--ccccCCCCCHHHHHHHc--CCHHHHHHHHHcC
Confidence 8863 5 99999999999999999999985 8855 88999999999999954 3467888776543
No 27
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.85 E-value=4.7e-21 Score=165.24 Aligned_cols=134 Identities=23% Similarity=0.310 Sum_probs=103.7
Q ss_pred hhhccc-CCCCChHHHHHHHc--CCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCc--HHHHHHHHHcCCCCCc
Q 028370 26 RSVIDT-DDRGWTPLHIGARK--GDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGH--LEVMDVLLERGADIDA 100 (210)
Q Consensus 26 ~~~~~~-d~~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~g~~~~~ 100 (210)
.+++.+ |..|.||||+|+.. ++.+++++|+++|++++.. |..|.||||+|+..|+ .+++++|++.|++++.
T Consensus 167 ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~k----D~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~ 242 (764)
T PHA02716 167 VNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQ----NNHLITPLHTYLITGNVCASVIKKIIELGGDMDM 242 (764)
T ss_pred CCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCC----CCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCC
Confidence 345666 77888888887643 5788888888888888887 8888888888888885 4788888888888888
Q ss_pred ccCCCCCChHHHHH-------------------------------------HhcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 028370 101 RTKGACGWTPLHTA-------------------------------------AKERKKEAVRFLIENGAFLPDDINDSRFN 143 (210)
Q Consensus 101 ~~~~~~g~tpL~~A-------------------------------------~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~ 143 (210)
++.. |.||||+| +..|+.+++++|+++|+++ +.+|..|+
T Consensus 243 kD~~--G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdI--N~kD~~G~ 318 (764)
T PHA02716 243 KCVN--GMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKL--HYKDSAGR 318 (764)
T ss_pred CCCC--CCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCce--eccCCCCC
Confidence 8776 88888865 3346778888888888865 77888888
Q ss_pred CcccccccchHHHHHHHHHhhhhh
Q 028370 144 PPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 144 t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
||||+|+....+..+++++|.+..
T Consensus 319 TPLH~Aaa~~~~~~eIVklLLe~G 342 (764)
T PHA02716 319 TCLHQYILRHNISTDIIKLLHEYG 342 (764)
T ss_pred CHHHHHHHHhCCCchHHHHHHHcC
Confidence 888887643434567788777653
No 28
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.85 E-value=1.7e-20 Score=158.23 Aligned_cols=135 Identities=21% Similarity=0.299 Sum_probs=107.3
Q ss_pred hhhh-cccCCCCChHHHHHHHc--CCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCC----cHHHHHHHHHcCCC
Q 028370 25 FRSV-IDTDDRGWTPLHIGARK--GDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGG----HLEVMDVLLERGAD 97 (210)
Q Consensus 25 ~~~~-~~~d~~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~----~~~~v~~Ll~~g~~ 97 (210)
..++ +.+|..|+||||+|+.. ++.++++.|+++|++++... +..|.||||+|+..+ +.+++++|++.|++
T Consensus 134 Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~---~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~ 210 (494)
T PHA02989 134 GINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKT---SLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVN 210 (494)
T ss_pred CCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccc---cccCCChHHHHHhcccccccHHHHHHHHhCCCC
Confidence 3455 56788899999988764 57889999999998887632 677889999887654 78889999988887
Q ss_pred CCcccC------------------------------------CCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCC
Q 028370 98 IDARTK------------------------------------GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSR 141 (210)
Q Consensus 98 ~~~~~~------------------------------------~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 141 (210)
++..+. +..|.||||+|+..|+.+++++|++.|+++ +.+|..
T Consensus 211 vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadi--n~~d~~ 288 (494)
T PHA02989 211 IETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDI--YNVSKD 288 (494)
T ss_pred ccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCc--cccCCC
Confidence 765431 234899999999999999999999999966 889999
Q ss_pred CCCcccccccchHHHHHHHHHhhhh
Q 028370 142 FNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 142 g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|.|||++|+.. +..++++.+.+.
T Consensus 289 G~TpL~~A~~~--~~~~iv~~LL~~ 311 (494)
T PHA02989 289 GDTVLTYAIKH--GNIDMLNRILQL 311 (494)
T ss_pred CCCHHHHHHHc--CCHHHHHHHHhc
Confidence 99999999854 446777776654
No 29
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.85 E-value=8.5e-21 Score=163.69 Aligned_cols=135 Identities=21% Similarity=0.237 Sum_probs=115.7
Q ss_pred hhhhcccCCCCChHHHHHHHcCC--HHHHHHHHHCCCCccccccCCCCCCCcHHHHH-----------------------
Q 028370 25 FRSVIDTDDRGWTPLHIGARKGD--IKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLA----------------------- 79 (210)
Q Consensus 25 ~~~~~~~d~~g~t~L~~A~~~g~--~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A----------------------- 79 (210)
..+++.+|..|.||||+|++.|+ .++++.|+++|++++.. +..|.||||+|
T Consensus 202 GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~k----D~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~ 277 (764)
T PHA02716 202 GVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMK----CVNGMSPIMTYIINIDNINPEITNIYIESLDGNK 277 (764)
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCC----CCCCCCHHHHHHHhhhccCHHHHHHHHHhccccc
Confidence 45678899999999999999995 59999999999999988 89999999975
Q ss_pred --------------HHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHh--cCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 028370 80 --------------AQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAK--ERKKEAVRFLIENGAFLPDDINDSRFN 143 (210)
Q Consensus 80 --------------~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~--~g~~~~v~~Ll~~g~~~~~~~~~~~g~ 143 (210)
+..|+.+++++|++.|++++.++.. |+||||+|+. .++.+++++|+++|+++ +.+|..|.
T Consensus 278 ~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~--G~TPLH~Aaa~~~~~~eIVklLLe~GADI--N~kD~~G~ 353 (764)
T PHA02716 278 VKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSA--GRTCLHQYILRHNISTDIIKLLHEYGNDL--NEPDNIGN 353 (764)
T ss_pred cccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCC--CCCHHHHHHHHhCCCchHHHHHHHcCCCC--ccCCCCCC
Confidence 3457788999999999999998877 9999999865 46799999999999966 88999999
Q ss_pred Ccccccccc------------hHHHHHHHHHhhhhh
Q 028370 144 PPLHYCPSL------------EWAYEEMMRFQRESF 167 (210)
Q Consensus 144 t~l~~a~~~------------~~~~~~~~~~l~~~~ 167 (210)
||||+|+.. ..+..+++++|.+..
T Consensus 354 TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~G 389 (764)
T PHA02716 354 TVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLG 389 (764)
T ss_pred CHHHHHHHhhhhhccccccccccChHHHHHHHHHCC
Confidence 999987631 124578888888764
No 30
>PHA02946 ankyin-like protein; Provisional
Probab=99.84 E-value=3.7e-20 Score=153.82 Aligned_cols=135 Identities=15% Similarity=0.159 Sum_probs=96.6
Q ss_pred hhcccCCCCChHHHHHHHcCC--HHHHHHHHHCCCCccccc-----------------------------cCCCCCCCcH
Q 028370 27 SVIDTDDRGWTPLHIGARKGD--IKLVKQLLDEGMDVNVAA-----------------------------WGPKSKGVTP 75 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g~--~~~v~~Ll~~g~~~~~~~-----------------------------~~~~~~g~t~ 75 (210)
+++.+|..|+||||+|+..++ .+++++|+++|++++... ...|..|+||
T Consensus 97 din~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~ 176 (446)
T PHA02946 97 DPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLLACTDPSERVFKKIMSIGFEARIVDKFGKNH 176 (446)
T ss_pred CCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHHHHHCCChHHHHHHHhccccccccCCCCCCH
Confidence 344556666666666655442 455556665555554211 0016678888
Q ss_pred HHHHHHCC--cHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcC--CHHHHHHHHHcCCCCCCCCCCCCCCCccccccc
Q 028370 76 LHLAAQGG--HLEVMDVLLERGADIDARTKGACGWTPLHTAAKER--KKEAVRFLIENGAFLPDDINDSRFNPPLHYCPS 151 (210)
Q Consensus 76 L~~A~~~~--~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g--~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~ 151 (210)
||+|+..+ +.+++++|++.|++++.++.+ |.||||+|+..| +.+++++|++ |+++ +.+|..|.||||+|+.
T Consensus 177 Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~--G~TpLH~Aa~~~~~~~~iv~lLl~-gadi--n~~d~~G~TpLh~A~~ 251 (446)
T PHA02946 177 IHRHLMSDNPKASTISWMMKLGISPSKPDHD--GNTPLHIVCSKTVKNVDIINLLLP-STDV--NKQNKFGDSPLTLLIK 251 (446)
T ss_pred HHHHHHhcCCCHHHHHHHHHcCCCCcccCCC--CCCHHHHHHHcCCCcHHHHHHHHc-CCCC--CCCCCCCCCHHHHHHH
Confidence 88877654 468899999999999998877 999999999976 7899999995 8855 8999999999999985
Q ss_pred chHHHHHHHHHhhhhh
Q 028370 152 LEWAYEEMMRFQRESF 167 (210)
Q Consensus 152 ~~~~~~~~~~~l~~~~ 167 (210)
.+. ..++++++....
T Consensus 252 ~~~-~~~~~~~Ll~~g 266 (446)
T PHA02946 252 TLS-PAHLINKLLSTS 266 (446)
T ss_pred hCC-hHHHHHHHHhCC
Confidence 432 246777766554
No 31
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.84 E-value=2.8e-20 Score=165.05 Aligned_cols=145 Identities=25% Similarity=0.250 Sum_probs=121.6
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDV 90 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (210)
|+........+. ..+++..|..|+||||.|+.+|+.++++.|+++|++++.. |..|.||||+|+..|+.+++++
T Consensus 536 g~~~~l~~Ll~~--G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~----d~~G~TpL~~A~~~g~~~iv~~ 609 (823)
T PLN03192 536 GNAALLEELLKA--KLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIR----DANGNTALWNAISAKHHKIFRI 609 (823)
T ss_pred CCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCc----CCCCCCHHHHHHHhCCHHHHHH
Confidence 444444443332 3457889999999999999999999999999999999988 8999999999999999999999
Q ss_pred HHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 91 LLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 91 Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
|+..++..+.. . +.++||.|+..|+.++++.|+++|+++ +.+|..|.||||+|+.. +..+++++|.+....
T Consensus 610 L~~~~~~~~~~--~--~~~~L~~Aa~~g~~~~v~~Ll~~Gadi--n~~d~~G~TpLh~A~~~--g~~~iv~~Ll~~GAd 680 (823)
T PLN03192 610 LYHFASISDPH--A--AGDLLCTAAKRNDLTAMKELLKQGLNV--DSEDHQGATALQVAMAE--DHVDMVRLLIMNGAD 680 (823)
T ss_pred HHhcCcccCcc--c--CchHHHHHHHhCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHC--CcHHHHHHHHHcCCC
Confidence 99887655432 2 679999999999999999999999966 88999999999999954 458999999876543
No 32
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.83 E-value=2.3e-20 Score=140.84 Aligned_cols=117 Identities=36% Similarity=0.514 Sum_probs=110.3
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
.+++.-|..|.+|||||++.|+..+++.|+++|+.+|.. +....||||.|+..|+.++|+-|++..+|++..+.-
T Consensus 25 hdln~gddhgfsplhwaakegh~aivemll~rgarvn~t----nmgddtplhlaaahghrdivqkll~~kadvnavneh- 99 (448)
T KOG0195|consen 25 HDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNST----NMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEH- 99 (448)
T ss_pred cccccccccCcchhhhhhhcccHHHHHHHHhcccccccc----cCCCCcchhhhhhcccHHHHHHHHHHhcccchhhcc-
Confidence 456778899999999999999999999999999999988 788889999999999999999999999999999877
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCP 150 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~ 150 (210)
|+|||||||.-|.-++++=|+..|+-+ ++-|++|.||++.|.
T Consensus 100 -gntplhyacfwgydqiaedli~~ga~v--~icnk~g~tpldkak 141 (448)
T KOG0195|consen 100 -GNTPLHYACFWGYDQIAEDLISCGAAV--NICNKKGMTPLDKAK 141 (448)
T ss_pred -CCCchhhhhhhcHHHHHHHHHhcccee--eecccCCCCchhhhc
Confidence 999999999999999999999999965 999999999999886
No 33
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.83 E-value=7.1e-20 Score=132.99 Aligned_cols=110 Identities=26% Similarity=0.254 Sum_probs=97.4
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHH---HHHHHHCCCCccccccCCC-CCCCcHHHHHHHCCcHHHHHHHHH-cCCCCCc
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKL---VKQLLDEGMDVNVAAWGPK-SKGVTPLHLAAQGGHLEVMDVLLE-RGADIDA 100 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~---v~~Ll~~g~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~ 100 (210)
..++.+|..|+||||+|+..|+.+. +++|++.|++++.+ + ..|.||||+|+..++.+++++|+. .|++++.
T Consensus 48 ~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~----d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~ 123 (166)
T PHA02743 48 HLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINAR----ELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGA 123 (166)
T ss_pred hhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCC----CCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccC
Confidence 3466789999999999999988654 89999999999987 6 589999999999999999999995 7999998
Q ss_pred ccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 028370 101 RTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFN 143 (210)
Q Consensus 101 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~ 143 (210)
++.. |.||||+|+..++.+++++|+++|+++ +.++..|.
T Consensus 124 ~d~~--g~tpL~~A~~~~~~~iv~~Ll~~ga~~--~~~~~~~~ 162 (166)
T PHA02743 124 INYQ--HETAYHIAYKMRDRRMMEILRANGAVC--DDPLSIGL 162 (166)
T ss_pred cCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCcccCCc
Confidence 8776 999999999999999999999999966 66666554
No 34
>PHA03095 ankyrin-like protein; Provisional
Probab=99.83 E-value=3.9e-20 Score=155.14 Aligned_cols=130 Identities=32% Similarity=0.343 Sum_probs=110.3
Q ss_pred hhcccCCCCChHHHHHHHc--CCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcH--HHHHHHHHcCCCCCccc
Q 028370 27 SVIDTDDRGWTPLHIGARK--GDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHL--EVMDVLLERGADIDART 102 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~~~ 102 (210)
+++..|..|.||||.|+.. ++.++++.|++.|++++.. |..|.||||+|+..++. .+++.|+..|++++.++
T Consensus 179 ~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~----d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d 254 (471)
T PHA03095 179 DVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAAT----DMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARN 254 (471)
T ss_pred CCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCccc----CCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcC
Confidence 3455677888888888865 6788888999999998888 88999999999998874 57888999999999998
Q ss_pred CCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 103 KGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 103 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
.. |.||||+|+..|+.+++++|+++|+++ +..+..|.||+++|+.. +..++++.+.+.
T Consensus 255 ~~--g~TpLh~A~~~~~~~~v~~LL~~gad~--n~~~~~g~tpl~~A~~~--~~~~~v~~LL~~ 312 (471)
T PHA03095 255 RY--GQTPLHYAAVFNNPRACRRLIALGADI--NAVSSDGNTPLSLMVRN--NNGRAVRAALAK 312 (471)
T ss_pred CC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--cccCCCCCCHHHHHHHh--CCHHHHHHHHHh
Confidence 76 999999999999999999999999965 89999999999999844 446777766654
No 35
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.83 E-value=1e-20 Score=150.77 Aligned_cols=129 Identities=28% Similarity=0.419 Sum_probs=116.9
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChH
Q 028370 31 TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTP 110 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tp 110 (210)
...+|-+||..|+..|++++|+.|+++|+++|.. .....|||..||.-|+.++|++|+++|+|++..++- |.|.
T Consensus 80 e~IegappLWaAsaAGHl~vVk~L~~~ga~VN~t----T~TNStPLraACfDG~leivKyLvE~gad~~Ianrh--GhTc 153 (615)
T KOG0508|consen 80 ETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDT----TRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRH--GHTC 153 (615)
T ss_pred cccCCCchhhHHhccCcHHHHHHHHHhcCccccc----cccCCccHHHHHhcchhHHHHHHHHcCCCCcccccC--CCee
Confidence 3457889999999999999999999999999977 667789999999999999999999999999999887 9999
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 111 LHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 111 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
|++||..|+.+|+++|++.|+++ +.++..|+|+||.|++. +..+++++|......
T Consensus 154 LmIa~ykGh~~I~qyLle~gADv--n~ks~kGNTALH~caEs--G~vdivq~Ll~~ga~ 208 (615)
T KOG0508|consen 154 LMIACYKGHVDIAQYLLEQGADV--NAKSYKGNTALHDCAES--GSVDIVQLLLKHGAK 208 (615)
T ss_pred EEeeeccCchHHHHHHHHhCCCc--chhcccCchHHHhhhhc--ccHHHHHHHHhCCce
Confidence 99999999999999999999966 99999999999999954 458999998875433
No 36
>PHA02798 ankyrin-like protein; Provisional
Probab=99.82 E-value=6.5e-20 Score=154.49 Aligned_cols=135 Identities=24% Similarity=0.346 Sum_probs=114.2
Q ss_pred hhhhcccCCCCChHHHHHHHc-----CCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCC---cHHHHHHHHHcCC
Q 028370 25 FRSVIDTDDRGWTPLHIGARK-----GDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGG---HLEVMDVLLERGA 96 (210)
Q Consensus 25 ~~~~~~~d~~g~t~L~~A~~~-----g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~g~ 96 (210)
..+++.+|..|.||||.|+.+ +..+++++|+++|++++.. +..|.||||+|+..+ +.+++++|+++|+
T Consensus 61 Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~----d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Ga 136 (489)
T PHA02798 61 GANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKK----NSDGETPLYCLLSNGYINNLEILLFMIENGA 136 (489)
T ss_pred CCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCC----CCCcCcHHHHHHHcCCcChHHHHHHHHHcCC
Confidence 456788999999999998864 6789999999999999988 899999999999875 6899999999999
Q ss_pred CCCcccCCCCCChHHHHHHhcCC---HHHHHHHHHcCCCCCCCCC-CCCCCCcccccccc--hHHHHHHHHHhhhhh
Q 028370 97 DIDARTKGACGWTPLHTAAKERK---KEAVRFLIENGAFLPDDIN-DSRFNPPLHYCPSL--EWAYEEMMRFQRESF 167 (210)
Q Consensus 97 ~~~~~~~~~~g~tpL~~A~~~g~---~~~v~~Ll~~g~~~~~~~~-~~~g~t~l~~a~~~--~~~~~~~~~~l~~~~ 167 (210)
+++..+.. |.||||+|+..++ .+++++|+++|+++ +.. +..|.||+|++... .....+++++|.+..
T Consensus 137 dvn~~d~~--g~tpL~~a~~~~~~~~~~vv~~Ll~~gadi--n~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~G 209 (489)
T PHA02798 137 DTTLLDKD--GFTMLQVYLQSNHHIDIEIIKLLLEKGVDI--NTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNG 209 (489)
T ss_pred CccccCCC--CCcHHHHHHHcCCcchHHHHHHHHHhCCCc--ccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCC
Confidence 99998877 9999999999987 99999999999976 555 45788999987642 123467788877654
No 37
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.82 E-value=5e-20 Score=142.63 Aligned_cols=149 Identities=28% Similarity=0.339 Sum_probs=123.0
Q ss_pred hcccCCCCChHHHHHHHcCCHHHHHHHHHCC-CCccccccCCCCCCCcHHHHHHH-----CCcHHHHHHHHHcCCCCCcc
Q 028370 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDEG-MDVNVAAWGPKSKGVTPLHLAAQ-----GGHLEVMDVLLERGADIDAR 101 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~g~t~L~~A~~-----~~~~~~v~~Ll~~g~~~~~~ 101 (210)
+|.-|.+|+|+||+++.++++++|+.|++.| ++++.. |+-|+||+|+++. ..+..+|..|+.. .++|.+
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~q----NrAGYtpiMLaALA~lk~~~d~~vV~~LF~m-gnVNaK 335 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQ----NRAGYTPVMLAALAKLKQPADRTVVERLFKM-GDVNAK 335 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCccccccc----ccccccHHHHHHHHhhcchhhHHHHHHHHhc-cCcchh
Confidence 5668999999999999999999999999998 577766 8889999998875 3456788888877 478877
Q ss_pred cCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhcCCCCccHHHHHH
Q 028370 102 TKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGETSYSSEKLNA 181 (210)
Q Consensus 102 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 181 (210)
.... |.|+|++|+..|+.++|+.|+.-|+++ +++|.+|.|+|.+|+ .++..||+++|+.....+..-...+....
T Consensus 336 AsQ~-gQTALMLAVSHGr~d~vk~LLacgAdV--NiQDdDGSTALMCA~--EHGhkEivklLLA~p~cd~sLtD~DgSTA 410 (452)
T KOG0514|consen 336 ASQH-GQTALMLAVSHGRVDMVKALLACGADV--NIQDDDGSTALMCAA--EHGHKEIVKLLLAVPSCDISLTDVDGSTA 410 (452)
T ss_pred hhhh-cchhhhhhhhcCcHHHHHHHHHccCCC--ccccCCccHHHhhhh--hhChHHHHHHHhccCcccceeecCCCchh
Confidence 5544 899999999999999999999999976 899999999999998 66779999999988777766666665555
Q ss_pred HhHHH
Q 028370 182 LSRLL 186 (210)
Q Consensus 182 ~~~~~ 186 (210)
+..++
T Consensus 411 l~IAl 415 (452)
T KOG0514|consen 411 LSIAL 415 (452)
T ss_pred hhhHH
Confidence 54443
No 38
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.82 E-value=2e-19 Score=151.72 Aligned_cols=136 Identities=18% Similarity=0.277 Sum_probs=112.7
Q ss_pred hhhhcccCCCCChHHHHHHHc---CCHHHHHHHHHCCCCc-cccccCCCCCCCcHHHHHHHC--CcHHHHHHHHHcCCCC
Q 028370 25 FRSVIDTDDRGWTPLHIGARK---GDIKLVKQLLDEGMDV-NVAAWGPKSKGVTPLHLAAQG--GHLEVMDVLLERGADI 98 (210)
Q Consensus 25 ~~~~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~-~~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g~~~ 98 (210)
..+++.+|..|.||||.|+.. ++.+++++|+++|+++ +.. +..|.||||+|+.. ++.+++++|++.|+++
T Consensus 98 Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~----d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi 173 (494)
T PHA02989 98 GADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVK----NSRGYNLLHMYLESFSVKKDVIKILLSFGVNL 173 (494)
T ss_pred CCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCccccc----CCCCCCHHHHHHHhccCCHHHHHHHHHcCCCc
Confidence 466788999999999988766 6799999999999999 677 89999999998764 6889999999999999
Q ss_pred Cc-ccCCCCCChHHHHHHhcC----CHHHHHHHHHcCCCCCC------------------------------------CC
Q 028370 99 DA-RTKGACGWTPLHTAAKER----KKEAVRFLIENGAFLPD------------------------------------DI 137 (210)
Q Consensus 99 ~~-~~~~~~g~tpL~~A~~~g----~~~~v~~Ll~~g~~~~~------------------------------------~~ 137 (210)
+. .+.. |.||||.|+..+ +.+++++|+++|++++. +.
T Consensus 174 ~~~~~~~--g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~ 251 (494)
T PHA02989 174 FEKTSLY--GLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINK 251 (494)
T ss_pred ccccccc--CCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCC
Confidence 87 4444 999999997654 89999999999986531 34
Q ss_pred CCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 138 NDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 138 ~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
+|..|.||||+|+. .+..+++++|.+...
T Consensus 252 ~d~~G~TpL~~Aa~--~~~~~~v~~LL~~Ga 280 (494)
T PHA02989 252 KDKKGFNPLLISAK--VDNYEAFNYLLKLGD 280 (494)
T ss_pred CCCCCCCHHHHHHH--hcCHHHHHHHHHcCC
Confidence 56679999999984 345788888887643
No 39
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.82 E-value=3.3e-19 Score=116.23 Aligned_cols=88 Identities=47% Similarity=0.783 Sum_probs=79.4
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcC
Q 028370 39 LHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKER 118 (210)
Q Consensus 39 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g 118 (210)
||+|++.|+.+++++|++.+.+++. |.||||+|+..|+.+++++|+++|++++.++.. |.||||+|+..|
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~--------~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~ 70 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL--------GNTALHYAAENGNLEIVKLLLENGADINSQDKN--GNTALHYAAENG 70 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS--------SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTT--SSBHHHHHHHTT
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC--------CCCHHHHHHHcCCHHHHHHHHHhcccccccCCC--CCCHHHHHHHcC
Confidence 7999999999999999998877642 779999999999999999999999999999877 999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCC
Q 028370 119 KKEAVRFLIENGAFLPDDIN 138 (210)
Q Consensus 119 ~~~~v~~Ll~~g~~~~~~~~ 138 (210)
+.+++++|+++|+++ +.+
T Consensus 71 ~~~~~~~Ll~~g~~~--~~~ 88 (89)
T PF12796_consen 71 NLEIVKLLLEHGADV--NIR 88 (89)
T ss_dssp HHHHHHHHHHTTT-T--TSS
T ss_pred CHHHHHHHHHcCCCC--CCc
Confidence 999999999999966 544
No 40
>PHA02795 ankyrin-like protein; Provisional
Probab=99.81 E-value=2.1e-19 Score=146.21 Aligned_cols=129 Identities=19% Similarity=0.093 Sum_probs=92.2
Q ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCccccccC--CCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHH
Q 028370 36 WTPLHIGARKGDIKLVKQLLDEGMDVNVAAWG--PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHT 113 (210)
Q Consensus 36 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~ 113 (210)
.||+|.|+..++.+++++|+++|++....... .+..+.+++|.|...++.+++++|+++|++++.++.. |.||||+
T Consensus 150 ~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~--G~TpLh~ 227 (437)
T PHA02795 150 LNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAG--GRTLLYR 227 (437)
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCC--CCCHHHH
Confidence 45555555555555555555555422111000 0123556777777777778888888888888888777 9999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchH------HHHHHHHHhhhhhh
Q 028370 114 AAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEW------AYEEMMRFQRESFS 168 (210)
Q Consensus 114 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~------~~~~~~~~l~~~~~ 168 (210)
|+..|+.+++++|+++|+++ +.++..|.||||+|+..+. ...+++++|.+...
T Consensus 228 Aa~~g~~eiVelLL~~GAdI--N~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~ga 286 (437)
T PHA02795 228 AIYAGYIDLVSWLLENGANV--NAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPL 286 (437)
T ss_pred HHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCC
Confidence 99999999999999999966 8899999999999996553 25688888876543
No 41
>PHA02917 ankyrin-like protein; Provisional
Probab=99.81 E-value=2.7e-19 Score=154.35 Aligned_cols=121 Identities=19% Similarity=0.276 Sum_probs=96.4
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHH--HCCcHHHHHHHHHcCCCCCcccCC-CCC--------
Q 028370 39 LHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAA--QGGHLEVMDVLLERGADIDARTKG-ACG-------- 107 (210)
Q Consensus 39 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~~~~~~~-~~g-------- 107 (210)
+++|+.+|+.+++++|+++|++++.. |..|+||||.|+ ..|+.+++++|+++|++++..+.+ ..|
T Consensus 107 ~~~a~~~~~~e~vk~Ll~~Gadin~~----d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~ 182 (661)
T PHA02917 107 SYMKSKNVDVDLIKVLVEHGFDLSVK----CENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQP 182 (661)
T ss_pred HHHHhhcCCHHHHHHHHHcCCCCCcc----CCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccc
Confidence 34444555678889999999999988 889999999553 478999999999999999865432 113
Q ss_pred ---ChHHHHHHh-----------cCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhh
Q 028370 108 ---WTPLHTAAK-----------ERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRE 165 (210)
Q Consensus 108 ---~tpL~~A~~-----------~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~ 165 (210)
.||||+|+. .++.+++++|+++|+++ +.+|..|.||||+|+..+....+++++|..
T Consensus 183 ~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadv--n~~d~~G~TpLh~A~~~g~~~~eivk~Li~ 252 (661)
T PHA02917 183 RNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKP--SSIDKNYCTALQYYIKSSHIDIDIVKLLMK 252 (661)
T ss_pred cccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCc--ccCCCCCCcHHHHHHHcCCCcHHHHHHHHh
Confidence 599999986 45889999999999966 889999999999999766544578888854
No 42
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.81 E-value=2.8e-19 Score=156.21 Aligned_cols=119 Identities=29% Similarity=0.421 Sum_probs=91.4
Q ss_pred hhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCc-HHHHHHHHHcCCCCCcccC
Q 028370 25 FRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGH-LEVMDVLLERGADIDARTK 103 (210)
Q Consensus 25 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~ 103 (210)
..+++.+|..|.||||+|+..|+.++++.|++.|++++.. +..|.||||+|+..++ ..++++|++.|++++.++.
T Consensus 365 gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~----~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~ 440 (682)
T PHA02876 365 GANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEAL----SQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNK 440 (682)
T ss_pred CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcccc----CCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCC
Confidence 3456667777888888888888888888888888887776 6777788888876554 4567788888888887777
Q ss_pred CCCCChHHHHHHhcC-CHHHHHHHHHcCCCCCCCCCCCCCCCccccccc
Q 028370 104 GACGWTPLHTAAKER-KKEAVRFLIENGAFLPDDINDSRFNPPLHYCPS 151 (210)
Q Consensus 104 ~~~g~tpL~~A~~~g-~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~ 151 (210)
+ |.||||+|+..| +.+++++|++.|+++ +..|..|.||+++|+.
T Consensus 441 ~--G~TpLh~Aa~~~~~~~iv~lLl~~Gad~--n~~d~~g~tpl~~a~~ 485 (682)
T PHA02876 441 D--LSTPLHYACKKNCKLDVIEMLLDNGADV--NAINIQNQYPLLIALE 485 (682)
T ss_pred C--CChHHHHHHHhCCcHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHH
Confidence 6 888888888766 578888888888855 7788888888888774
No 43
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.80 E-value=1.8e-19 Score=151.66 Aligned_cols=133 Identities=31% Similarity=0.432 Sum_probs=109.3
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHH-cCC-CCCcccC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLE-RGA-DIDARTK 103 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~-~~~~~~~ 103 (210)
+.++..|++|.||||+|++.|..+++..|+..|++++.+ +.++.||||.|+..|+...|+.|++ .+. ..+..|.
T Consensus 264 elv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~k----n~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~ 339 (929)
T KOG0510|consen 264 ELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSK----NKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDL 339 (929)
T ss_pred HHhhcccccCCchHHHHHHcCChhHHHHHHHcCCccccc----CCCCCCchHHHHHcccHHHHHHHHhCcCccccccccc
Confidence 346779999999999999999999999999999999988 8999999999999999999999998 443 3444444
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHcCCCCC-CCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 104 GACGWTPLHTAAKERKKEAVRFLIENGAFLP-DDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 104 ~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
. |.||||.|+.+|+-.++++|+..|+... ....|.+|.||||.|+.. +....++.+...
T Consensus 340 ~--g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~--g~~~av~~Li~~ 399 (929)
T KOG0510|consen 340 H--GMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKY--GNTSAVQKLISH 399 (929)
T ss_pred c--CCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHh--ccHHHHHHHHHc
Confidence 4 9999999999999999999999999552 114489999999999944 345566555544
No 44
>PHA02730 ankyrin-like protein; Provisional
Probab=99.80 E-value=6.3e-19 Score=149.77 Aligned_cols=134 Identities=16% Similarity=0.136 Sum_probs=110.4
Q ss_pred hhhhcccCCCCChHHHHHHHcCC----HHHHHHHHHCCC--CccccccCCCCCCCcHHHH---HHHCC---------cHH
Q 028370 25 FRSVIDTDDRGWTPLHIGARKGD----IKLVKQLLDEGM--DVNVAAWGPKSKGVTPLHL---AAQGG---------HLE 86 (210)
Q Consensus 25 ~~~~~~~d~~g~t~L~~A~~~g~----~~~v~~Ll~~g~--~~~~~~~~~~~~g~t~L~~---A~~~~---------~~~ 86 (210)
.++++.. ..|.||||.|+..++ .+++++|+++|+ +++.. +..|.||||. |...+ ..+
T Consensus 369 GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~k----d~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ 443 (672)
T PHA02730 369 GATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHV----SNNGRLCMYGLILSRFNNCGYHCYETILID 443 (672)
T ss_pred CCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCcccccc----ccCCCchHhHHHHHHhccccccccchhHHH
Confidence 4556654 789999999998875 899999999997 57766 8899999984 33232 235
Q ss_pred HHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCC-CCCCcccccccchHHHHHHHHHhhh
Q 028370 87 VMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDS-RFNPPLHYCPSLEWAYEEMMRFQRE 165 (210)
Q Consensus 87 ~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~~~l~~ 165 (210)
++++|+.+|++++.++.. |.||||+|+..++.+++++|+++|+++ +..+. .|+||+++|+....+..+++++|.+
T Consensus 444 ivk~LIs~GADINakD~~--G~TPLh~Aa~~~~~eive~LI~~GAdI--N~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs 519 (672)
T PHA02730 444 VFDILSKYMDDIDMIDNE--NKTLLYYAVDVNNIQFARRLLEYGASV--NTTSRSIINTAIQKSSYRRENKTKLVDLLLS 519 (672)
T ss_pred HHHHHHhcccchhccCCC--CCCHHHHHHHhCCHHHHHHHHHCCCCC--CCCCCcCCcCHHHHHHHhhcCcHHHHHHHHH
Confidence 799999999999999888 999999999999999999999999976 77786 5899999998543445778888776
Q ss_pred hh
Q 028370 166 SF 167 (210)
Q Consensus 166 ~~ 167 (210)
..
T Consensus 520 ~g 521 (672)
T PHA02730 520 YH 521 (672)
T ss_pred cC
Confidence 54
No 45
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.80 E-value=2e-19 Score=158.60 Aligned_cols=127 Identities=34% Similarity=0.630 Sum_probs=105.9
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHH
Q 028370 33 DRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLH 112 (210)
Q Consensus 33 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~ 112 (210)
+.|.+++|.|...+...+++.++++|++++.+ +..|.||||.|+..|+..+|++|+++|++++.++.. |.||||
T Consensus 505 ~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~----~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~--G~TPLH 578 (1143)
T KOG4177|consen 505 KKGLTPLHLAADEDTVKVAKILLEHGANVDLR----TGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKL--GYTPLH 578 (1143)
T ss_pred hhccchhhhhhhhhhHHHHHHHhhcCCceehh----cccccchHHHHHhcCCchHHHHhhhCCccccccCCC--CCChhh
Confidence 45666666666666666666666667766666 788999999999999999999999999999999866 999999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 113 TAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 113 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
.||..|+.+|+.+|+++|+++ +..+.+|.|||++|+.. ++..+++.+......
T Consensus 579 ~Aa~~G~~~i~~LLlk~GA~v--na~d~~g~TpL~iA~~l--g~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 579 QAAQQGHNDIAELLLKHGASV--NAADLDGFTPLHIAVRL--GYLSVVKLLKVVTAT 631 (1143)
T ss_pred HHHHcChHHHHHHHHHcCCCC--CcccccCcchhHHHHHh--cccchhhHHHhccCc
Confidence 999999999999999999965 99999999999999954 457777777766554
No 46
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.79 E-value=1.5e-18 Score=121.85 Aligned_cols=140 Identities=30% Similarity=0.432 Sum_probs=112.7
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCC-ccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHh
Q 028370 38 PLHIGARKGDIKLVKQLLDEGMD-VNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAK 116 (210)
Q Consensus 38 ~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~ 116 (210)
-+.+|+..+....|+.|++..++ +|.+ |.+|.||||-|+..|+.+||+.|+..|++++.++.. |+||||-||.
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtr----D~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~--GWTPLhSAck 139 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTR----DEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNE--GWTPLHSACK 139 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhcccccccc----ccccccHHHHHHhcCchHHHHHHHHccCCccccccc--Cccchhhhhc
Confidence 46889999999999999998775 4556 999999999999999999999999999999999888 9999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh--hhcCCCCccHHHHHHHhHHH
Q 028370 117 ERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES--FSAGETSYSSEKLNALSRLL 186 (210)
Q Consensus 117 ~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~ 186 (210)
-.+.+|+.+|+++|+++ +.......||||.|+.+.+. ...+.+|... ...+......+....++|..
T Consensus 140 WnN~~va~~LLqhgaDV--nA~t~g~ltpLhlaa~~rn~-r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT 208 (228)
T KOG0512|consen 140 WNNFEVAGRLLQHGADV--NAQTKGLLTPLHLAAGNRNS-RDTLELLLHDRYIHPGLKNNLEETAFDIARRT 208 (228)
T ss_pred ccchhHHHHHHhccCcc--cccccccchhhHHhhcccch-HHHHHHHhhccccChhhhcCccchHHHHHHHh
Confidence 99999999999999977 77888889999999865533 3333333332 22333344455555566644
No 47
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.79 E-value=2.6e-18 Score=150.15 Aligned_cols=115 Identities=31% Similarity=0.436 Sum_probs=56.8
Q ss_pred hcccCCCCChHHHHHHHcC-CHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHC-CcHHHHHHHHHcCCCCCcccCCC
Q 028370 28 VIDTDDRGWTPLHIGARKG-DIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQG-GHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~g-~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
++.+|..|.||||+|+..| +.++++.|+..|++++.. +..|.||||+|+.. ++.+++++|++.|++++.++..
T Consensus 300 in~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~----d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~- 374 (682)
T PHA02876 300 VNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAA----DRLYITPLHQASTLDRNKDIVITLLELGANVNARDYC- 374 (682)
T ss_pred CCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCc----ccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCC-
Confidence 4445555666666666555 355555555555555544 44455555555442 2344445555555555544444
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCP 150 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~ 150 (210)
|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+
T Consensus 375 -G~TpLh~Aa~~~~~~iv~~Ll~~gad~--~~~~~~g~T~Lh~A~ 416 (682)
T PHA02876 375 -DKTPIHYAAVRNNVVIINTLLDYGADI--EALSQKIGTALHFAL 416 (682)
T ss_pred -CCCHHHHHHHcCCHHHHHHHHHCCCCc--cccCCCCCchHHHHH
Confidence 555555555555555555555444432 333444444444443
No 48
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.79 E-value=4e-18 Score=117.07 Aligned_cols=124 Identities=43% Similarity=0.725 Sum_probs=109.2
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCCh
Q 028370 30 DTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWT 109 (210)
Q Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~t 109 (210)
.+|..|.||||.|+..++.++++.|++.+.+.+.. +..|.+|+|.|+..+..+++++|+..++.++..+.. |.|
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~----~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~--~~~ 75 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAK----DNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKD--GNT 75 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcc----CCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCC--CCC
Confidence 35788999999999999999999999999987666 889999999999999999999999999888877755 899
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHh
Q 028370 110 PLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQ 163 (210)
Q Consensus 110 pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l 163 (210)
|+|+|+..++.+++++|++.+.++ ...+..|.||+++|... ...+++++|
T Consensus 76 ~l~~a~~~~~~~~~~~L~~~~~~~--~~~~~~~~~~l~~~~~~--~~~~~~~~L 125 (126)
T cd00204 76 PLHLAARNGNLDVVKLLLKHGADV--NARDKDGRTPLHLAAKN--GHLEVVKLL 125 (126)
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCC--cccCCCCCCHHHHHHhc--CCHHHHHHh
Confidence 999999999999999999999755 77889999999999854 345555544
No 49
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.78 E-value=1e-18 Score=125.43 Aligned_cols=99 Identities=23% Similarity=0.306 Sum_probs=90.1
Q ss_pred cccCCCCChHHHHHHHcCCH---HHHHHHHHCCCCccccccCCC-CCCCcHHHHHHHCCcHHHHHHHHH-cCCCCCcccC
Q 028370 29 IDTDDRGWTPLHIGARKGDI---KLVKQLLDEGMDVNVAAWGPK-SKGVTPLHLAAQGGHLEVMDVLLE-RGADIDARTK 103 (210)
Q Consensus 29 ~~~d~~g~t~L~~A~~~g~~---~~v~~Ll~~g~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~ 103 (210)
..+|..|.||||+|+..|+. +++++|++.|++++.. + ..|.||||+|+..++.+++++|+. .|++++..+.
T Consensus 49 ~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~----~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~ 124 (154)
T PHA02736 49 LEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGK----ERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNY 124 (154)
T ss_pred HHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcccc----CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccC
Confidence 34688999999999999987 4688999999999987 6 489999999999999999999998 5899998887
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHcCCCC
Q 028370 104 GACGWTPLHTAAKERKKEAVRFLIENGAFL 133 (210)
Q Consensus 104 ~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 133 (210)
. |.||||+|+..|+.+++++|+++|++.
T Consensus 125 ~--g~tpL~~A~~~~~~~i~~~Ll~~ga~~ 152 (154)
T PHA02736 125 A--FKTPYYVACERHDAKMMNILRAKGAQC 152 (154)
T ss_pred C--CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 7 999999999999999999999999854
No 50
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.78 E-value=3e-18 Score=144.42 Aligned_cols=155 Identities=25% Similarity=0.321 Sum_probs=122.3
Q ss_pred cchhHHHHHHhhHHHhhh------------hcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccc-----------c
Q 028370 10 LGPFTLQRKASRKRFFRS------------VIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAA-----------W 66 (210)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~------------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~ 66 (210)
+.|+..+.+.....+.+- ++.-|..|.||||.|+..|+.++++.+++.|....... .
T Consensus 188 ~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~ 267 (929)
T KOG0510|consen 188 NFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVN 267 (929)
T ss_pred CchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhh
Confidence 345666666666665443 34467789999999999999999999998875332211 2
Q ss_pred CCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHH-cCCCCCCCCCCCCCCCc
Q 028370 67 GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIE-NGAFLPDDINDSRFNPP 145 (210)
Q Consensus 67 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~g~t~ 145 (210)
..|.+|.||||+|++.|+.+.++.|+..|++++.++.+ +.||||.|+..|++++|+-|++ .+.. ..+..|..|.||
T Consensus 268 ~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d--~~spLH~AA~yg~~ntv~rLL~~~~~r-llne~D~~g~tp 344 (929)
T KOG0510|consen 268 DEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKD--EESPLHFAAIYGRINTVERLLQESDTR-LLNESDLHGMTP 344 (929)
T ss_pred cccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCC--CCCchHHHHHcccHHHHHHHHhCcCcc-ccccccccCCCc
Confidence 34788999999999999999999999999999999877 8999999999999999999999 4432 357788899999
Q ss_pred ccccccchHHHHHHHHHhhhhhhc
Q 028370 146 LHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 146 l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
||.|+ +.+...++++|......
T Consensus 345 LHlaa--~~gH~~v~qlLl~~GA~ 366 (929)
T KOG0510|consen 345 LHLAA--KSGHDRVVQLLLNKGAL 366 (929)
T ss_pred hhhhh--hcCHHHHHHHHHhcChh
Confidence 99999 55668888888776444
No 51
>PHA02730 ankyrin-like protein; Provisional
Probab=99.77 E-value=4.6e-18 Score=144.58 Aligned_cols=132 Identities=17% Similarity=0.168 Sum_probs=108.5
Q ss_pred ccCCCCChHHHHHHHcC---CHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCC--cHHHHHHHHHcCCCC--Cccc
Q 028370 30 DTDDRGWTPLHIGARKG---DIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGG--HLEVMDVLLERGADI--DART 102 (210)
Q Consensus 30 ~~d~~g~t~L~~A~~~g---~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~g~~~--~~~~ 102 (210)
.+|..|+||||+|+.+| +.+++++|+++|++++.. |..|.||||+|+..+ +.+++++|++.|++. +..+
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~k----D~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~ 111 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCR----NNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTS 111 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCccc----CCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCccccc
Confidence 78899999999999997 599999999999999988 999999999999977 799999999997655 4444
Q ss_pred CCCCCChHHHHHHh--cCCHHHHHHHHH-cCCCCCCC--CCC-CCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 103 KGACGWTPLHTAAK--ERKKEAVRFLIE-NGAFLPDD--IND-SRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 103 ~~~~g~tpL~~A~~--~g~~~~v~~Ll~-~g~~~~~~--~~~-~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
.- +.+||+.++. .++.+++++|+. .+.++... ..+ ..|-+|+++++. .+..+++++|.+....
T Consensus 112 ~~--~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~--~~~~eIvklLi~~g~~ 180 (672)
T PHA02730 112 NI--NDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTP--NPRPEVLLWLLKSECY 180 (672)
T ss_pred cc--CCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcC--CCchHHHHHHHHcCCc
Confidence 33 7789999888 888999999997 55654322 111 378899999984 4568999999988444
No 52
>PHA02741 hypothetical protein; Provisional
Probab=99.77 E-value=8.6e-18 Score=122.44 Aligned_cols=101 Identities=27% Similarity=0.369 Sum_probs=92.8
Q ss_pred hhhcccCCCCChHHHHHHHcCC----HHHHHHHHHCCCCccccccCCCC-CCCcHHHHHHHCCcHHHHHHHHH-cCCCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGD----IKLVKQLLDEGMDVNVAAWGPKS-KGVTPLHLAAQGGHLEVMDVLLE-RGADID 99 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~ 99 (210)
.+++.+|..|+||||+|+..|+ .+++++|++.|++++.. +. .|.||||+|+..++.+++++|+. .|++++
T Consensus 51 a~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~----~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~ 126 (169)
T PHA02741 51 AALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQ----EMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLH 126 (169)
T ss_pred hhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCC----CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence 5678899999999999999998 58999999999999887 64 89999999999999999999997 599999
Q ss_pred cccCCCCCChHHHHHHhcCCHHHHHHHHHcCCC
Q 028370 100 ARTKGACGWTPLHTAAKERKKEAVRFLIENGAF 132 (210)
Q Consensus 100 ~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 132 (210)
..+.+ |.||||+|+..++.+++++|++.++.
T Consensus 127 ~~n~~--g~tpL~~A~~~~~~~iv~~L~~~~~~ 157 (169)
T PHA02741 127 FCNAD--NKSPFELAIDNEDVAMMQILREIVAT 157 (169)
T ss_pred cCCCC--CCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence 88877 99999999999999999999998873
No 53
>PHA02917 ankyrin-like protein; Provisional
Probab=99.77 E-value=4.6e-18 Score=146.79 Aligned_cols=131 Identities=17% Similarity=0.136 Sum_probs=108.4
Q ss_pred hcccCCCCChHHHHHHHc---CCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcH----HHHHHHHHcCCCCCc
Q 028370 28 VIDTDDRGWTPLHIGARK---GDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHL----EVMDVLLERGADIDA 100 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~----~~v~~Ll~~g~~~~~ 100 (210)
.+.+|..|+||||+|+.. |+.++++.|++.|++++.. +..|.||||+|+..|+. ++++.|++.+...+.
T Consensus 25 ~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~----~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~ 100 (661)
T PHA02917 25 NDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHK----NWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNI 100 (661)
T ss_pred ccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCcccc----CCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCC
Confidence 356799999999998665 8899999999999999987 89999999999999985 456788876544444
Q ss_pred ccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 101 RTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 101 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
.+ ..+++++|+..|+.+++++|+++|+++ +.+|..|.|||++++....+..+++++|.+...
T Consensus 101 ~~----~~~~~~~a~~~~~~e~vk~Ll~~Gadi--n~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga 162 (661)
T PHA02917 101 ND----FNIFSYMKSKNVDVDLIKVLVEHGFDL--SVKCENHRSVIENYVMTDDPVPEIIDLFIENGC 162 (661)
T ss_pred CC----cchHHHHHhhcCCHHHHHHHHHcCCCC--CccCCCCccHHHHHHHccCCCHHHHHHHHHcCC
Confidence 32 347788899999999999999999966 899999999999665435567899999988754
No 54
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.76 E-value=5.5e-18 Score=131.43 Aligned_cols=151 Identities=25% Similarity=0.334 Sum_probs=125.2
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHc-----CCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARK-----GDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHL 85 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~-----g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~ 85 (210)
++|..+...+.-...+ ++.+|+-|.||+++++.. .+.++|..|..-| ++|.+. ..-|+|+||+|+.+|+.
T Consensus 279 aNF~VV~~LLDSgvC~-VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKA---sQ~gQTALMLAVSHGr~ 353 (452)
T KOG0514|consen 279 ANFDVVSILLDSGVCD-VDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKA---SQHGQTALMLAVSHGRV 353 (452)
T ss_pred cchHHHHHHhccCccc-ccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhh---hhhcchhhhhhhhcCcH
Confidence 6788888877766554 788999999999998854 4678899998886 577664 67799999999999999
Q ss_pred HHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhh
Q 028370 86 EVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRE 165 (210)
Q Consensus 86 ~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~ 165 (210)
++|+.|+.+|+|+|.+|.+ |.|+|++||..|+.+++++|+..+. .+....|.+|.|+|.+|-+.++.-...+-+.+.
T Consensus 354 d~vk~LLacgAdVNiQDdD--GSTALMCA~EHGhkEivklLLA~p~-cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~~ 430 (452)
T KOG0514|consen 354 DMVKALLACGADVNIQDDD--GSTALMCAAEHGHKEIVKLLLAVPS-CDISLTDVDGSTALSIALEAGHREIAVMLYAHM 430 (452)
T ss_pred HHHHHHHHccCCCccccCC--ccHHHhhhhhhChHHHHHHHhccCc-ccceeecCCCchhhhhHHhcCchHHHHHHHHHH
Confidence 9999999999999999999 9999999999999999999999853 244899999999999998666544444554444
Q ss_pred hhhc
Q 028370 166 SFSA 169 (210)
Q Consensus 166 ~~~~ 169 (210)
.+..
T Consensus 431 n~~~ 434 (452)
T KOG0514|consen 431 NIKR 434 (452)
T ss_pred Hhhh
Confidence 4433
No 55
>PHA02795 ankyrin-like protein; Provisional
Probab=99.76 E-value=4.8e-18 Score=138.30 Aligned_cols=130 Identities=12% Similarity=0.024 Sum_probs=110.3
Q ss_pred ccCCCCChHHHHHHH--cCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCccc-C---
Q 028370 30 DTDDRGWTPLHIGAR--KGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDART-K--- 103 (210)
Q Consensus 30 ~~d~~g~t~L~~A~~--~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~--- 103 (210)
.++..++|+||.++. .|+.+++++|+++|++++.. + +.||+|+|+..++.+++++|+++|++..... .
T Consensus 111 ~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~----~--~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~ 184 (437)
T PHA02795 111 KNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI----E--CLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLY 184 (437)
T ss_pred hccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC----C--CCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhh
Confidence 477789999999999 89999999999999999864 3 4799999999999999999999998543221 1
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 104 GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 104 ~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
+..+.|++|.|...++.+++++|+++|+++ +.+|..|.||||+|+.. +..+++++|.+....
T Consensus 185 ~~~~~t~l~~a~~~~~~eIve~LIs~GADI--N~kD~~G~TpLh~Aa~~--g~~eiVelLL~~GAd 246 (437)
T PHA02795 185 KIIQYTRGFLVDEPTVLEIYKLCIPYIEDI--NQLDAGGRTLLYRAIYA--GYIDLVSWLLENGAN 246 (437)
T ss_pred hhhccchhHHHHhcCHHHHHHHHHhCcCCc--CcCCCCCCCHHHHHHHc--CCHHHHHHHHHCCCC
Confidence 122779999999999999999999999976 88999999999999954 457899998876543
No 56
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.75 E-value=1.7e-17 Score=147.35 Aligned_cols=126 Identities=24% Similarity=0.270 Sum_probs=110.8
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChH
Q 028370 31 TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTP 110 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tp 110 (210)
.+..+.++|+.|+..|+.++++.|++.|++++.. |..|.||||+|+..|+.+++++|+++|++++.++.+ |.||
T Consensus 521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~----d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~--G~Tp 594 (823)
T PLN03192 521 DDPNMASNLLTVASTGNAALLEELLKAKLDPDIG----DSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDAN--GNTA 594 (823)
T ss_pred CCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCC--CCCH
Confidence 3445679999999999999999999999999988 999999999999999999999999999999998877 9999
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 111 LHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 111 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
||+|+..|+.+++++|++.++.. ....|.++|++|+. .+..+++++|.+...
T Consensus 595 L~~A~~~g~~~iv~~L~~~~~~~----~~~~~~~~L~~Aa~--~g~~~~v~~Ll~~Ga 646 (823)
T PLN03192 595 LWNAISAKHHKIFRILYHFASIS----DPHAAGDLLCTAAK--RNDLTAMKELLKQGL 646 (823)
T ss_pred HHHHHHhCCHHHHHHHHhcCccc----CcccCchHHHHHHH--hCCHHHHHHHHHCCC
Confidence 99999999999999999988743 23456789999994 445788888876543
No 57
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.74 E-value=2.2e-17 Score=104.19 Aligned_cols=105 Identities=33% Similarity=0.523 Sum_probs=94.5
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHh
Q 028370 37 TPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAK 116 (210)
Q Consensus 37 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~ 116 (210)
--+.|++++|.++.|+..+..|.+++.. ..|++|||+|+-.|+.+++++|+.-|++++..+.. |-|||--|++
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~-----~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKy--gITPLLsAvw 76 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEI-----YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKY--GITPLLSAVW 76 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHH-----hCCcccchHhhhcchHHHHHHHHHhccccCCcccc--CCcHHHHHHH
Confidence 3467999999999999999999888754 47899999999999999999999999999988776 9999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 028370 117 ERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCP 150 (210)
Q Consensus 117 ~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~ 150 (210)
.|+.+||++|+++|+ +..++..+|++.+..+-
T Consensus 77 EGH~~cVklLL~~GA--drt~~~PdG~~~~eate 108 (117)
T KOG4214|consen 77 EGHRDCVKLLLQNGA--DRTIHAPDGTALIEATE 108 (117)
T ss_pred HhhHHHHHHHHHcCc--ccceeCCCchhHHhhcc
Confidence 999999999999999 45888889988887654
No 58
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.73 E-value=6.1e-17 Score=126.89 Aligned_cols=126 Identities=21% Similarity=0.254 Sum_probs=102.0
Q ss_pred hhhccc----CCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcc
Q 028370 26 RSVIDT----DDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDAR 101 (210)
Q Consensus 26 ~~~~~~----d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 101 (210)
.+++.+ +..|.||||+|+..++.+++++|+++|++++... +..|.||||+|+..++.+++++|+..|++++..
T Consensus 57 AdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~---~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~k 133 (300)
T PHA02884 57 ADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYA---EEAKITPLYISVLHGCLKCLEILLSYGADINIQ 133 (300)
T ss_pred CCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCccc---CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 445555 4589999999999999999999999999999752 457999999999999999999999999999999
Q ss_pred cCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 102 TKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 102 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
+.+ |.||||+|+..++.+++..+. |. . .+..+.+|..++. ..+++++|....-
T Consensus 134 d~~--G~TpL~~A~~~~~~~~~~~~~--~~----~-~~~~~~~~~~~~~-----n~ei~~~Lish~v 186 (300)
T PHA02884 134 TND--MVTPIELALMICNNFLAFMIC--DN----E-ISNFYKHPKKILI-----NFDILKILVSHFI 186 (300)
T ss_pred CCC--CCCHHHHHHHhCChhHHHHhc--CC----c-ccccccChhhhhc-----cHHHHHHHHHHHH
Confidence 887 999999999999988876664 33 1 3445567877653 2466666655543
No 59
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.73 E-value=3.9e-17 Score=132.19 Aligned_cols=148 Identities=30% Similarity=0.409 Sum_probs=125.4
Q ss_pred hhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHH
Q 028370 12 PFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVL 91 (210)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 91 (210)
-...+.+..... ..++..+.+|.|+||.+|.-.+.++|++|++.|++++.. |..|+||||.|+..|+..++++|
T Consensus 52 d~~ev~~ll~~g--a~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~----d~e~wtPlhaaascg~~~i~~~l 125 (527)
T KOG0505|consen 52 DLEEVRKLLNRG--ASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQ----DNEGWTPLHAAASCGYLNIVEYL 125 (527)
T ss_pred cHHHHHHHhccC--CCccccCCccchhHHHHHhcccHHHHHHHHHhcCCcccc----ccccCCcchhhcccccHHHHHHH
Confidence 334444444444 445778999999999999999999999999999999988 99999999999999999999999
Q ss_pred HHcCCCCCcccCC---------------------------------------------------------CCCChHHHHH
Q 028370 92 LERGADIDARTKG---------------------------------------------------------ACGWTPLHTA 114 (210)
Q Consensus 92 l~~g~~~~~~~~~---------------------------------------------------------~~g~tpL~~A 114 (210)
++.|+++...+.+ ..|-|.||.|
T Consensus 126 i~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvA 205 (527)
T KOG0505|consen 126 IQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVA 205 (527)
T ss_pred HHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHH
Confidence 9988765544321 2388999999
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 115 AKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 115 ~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
+..|..++.++|+..|.++ .++|.+|+||||.|+ -|+..+..++|.+....
T Consensus 206 aa~Gy~e~~~lLl~ag~~~--~~~D~dgWtPlHAAA--~Wg~~~~~elL~~~ga~ 256 (527)
T KOG0505|consen 206 AANGYTEVAALLLQAGYSV--NIKDYDGWTPLHAAA--HWGQEDACELLVEHGAD 256 (527)
T ss_pred HhhhHHHHHHHHHHhccCc--ccccccCCCcccHHH--HhhhHhHHHHHHHhhcc
Confidence 9999999999999999965 999999999999998 78888998888877544
No 60
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.72 E-value=1.5e-17 Score=146.98 Aligned_cols=120 Identities=36% Similarity=0.525 Sum_probs=109.4
Q ss_pred hcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCC
Q 028370 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACG 107 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g 107 (210)
.+.++..|.||||.||..|+.++|++|+++|++++.+ +..|+||||.|+..|+.+|+.+|+++|+++|..+.+ |
T Consensus 533 v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak----~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~--g 606 (1143)
T KOG4177|consen 533 VDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAK----DKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLD--G 606 (1143)
T ss_pred eehhcccccchHHHHHhcCCchHHHHhhhCCcccccc----CCCCCChhhHHHHcChHHHHHHHHHcCCCCCccccc--C
Confidence 4457778999999999999999999999999999999 899999999999999999999999999999999998 9
Q ss_pred ChHHHHHHhcCCHHHHHHHHHcCCC---CCCCCCCCCCCCcccccccch
Q 028370 108 WTPLHTAAKERKKEAVRFLIENGAF---LPDDINDSRFNPPLHYCPSLE 153 (210)
Q Consensus 108 ~tpL~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~~~g~t~l~~a~~~~ 153 (210)
+||||.|+..|+++++++|...+++ ......+..|.+|...+....
T Consensus 607 ~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e~~~ 655 (1143)
T KOG4177|consen 607 FTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVAEELD 655 (1143)
T ss_pred cchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhHHHHhh
Confidence 9999999999999999999999985 114677889999999876443
No 61
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.72 E-value=3.3e-17 Score=119.29 Aligned_cols=128 Identities=25% Similarity=0.304 Sum_probs=106.8
Q ss_pred hcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCC
Q 028370 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACG 107 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g 107 (210)
.++.+--+++|+.+++..-+++.+-.+.++.. |.. |..|.|||.||+..|++.+|++|++.|++++..-.. .
T Consensus 122 gnevs~~p~s~~slsVhql~L~~~~~~~~n~V--N~~----De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~--r 193 (296)
T KOG0502|consen 122 GNEVSLMPWSPLSLSVHQLHLDVVDLLVNNKV--NAC----DEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKY--R 193 (296)
T ss_pred CCccccccCChhhHHHHHHHHHHHHHHhhccc--cCc----cccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhh--h
Confidence 45566677888888888777777666665543 333 899999999999999999999999999999988766 7
Q ss_pred ChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 108 WTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 108 ~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
+|+|.+|+..|..++|++|+..+.++ +.-|.+|-|||-||+. .++..+++-|....
T Consensus 194 esALsLAt~ggytdiV~lLL~r~vdV--NvyDwNGgTpLlyAvr--gnhvkcve~Ll~sG 249 (296)
T KOG0502|consen 194 ESALSLATRGGYTDIVELLLTREVDV--NVYDWNGGTPLLYAVR--GNHVKCVESLLNSG 249 (296)
T ss_pred hhhHhHHhcCChHHHHHHHHhcCCCc--ceeccCCCceeeeeec--CChHHHHHHHHhcC
Confidence 89999999999999999999999976 8999999999999994 45567777666553
No 62
>PHA02792 ankyrin-like protein; Provisional
Probab=99.72 E-value=1.2e-16 Score=134.83 Aligned_cols=109 Identities=19% Similarity=0.190 Sum_probs=97.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCC--CCcHHHHHHHCCcH---HHHHHHHHcCCCCCcccCCCCCCh
Q 028370 35 GWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSK--GVTPLHLAAQGGHL---EVMDVLLERGADIDARTKGACGWT 109 (210)
Q Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~--g~t~L~~A~~~~~~---~~v~~Ll~~g~~~~~~~~~~~g~t 109 (210)
+..+++.|+..|+.+++++|+++|++++.. |.. +.||||+|+..... +++++|+++|++++.++.. |.|
T Consensus 339 ~~n~~~~Aa~~gn~eIVelLIs~GADIN~k----D~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~--G~T 412 (631)
T PHA02792 339 HINKYFQKFDNRDPKVVEYILKNGNVVVED----DDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKH--GRS 412 (631)
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCchhhh----cCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCcccccccc--Ccc
Confidence 566799999999999999999999999877 655 46999998776654 4689999999999999887 999
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCccccccc
Q 028370 110 PLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPS 151 (210)
Q Consensus 110 pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~ 151 (210)
|||+|+..++.+++++|+++|+++ +.++..|.||+++|..
T Consensus 413 PLh~Aa~~~n~eivelLLs~GADI--N~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 413 ILYYCIESHSVSLVEWLIDNGADI--NITTKYGSTCIGICVI 452 (631)
T ss_pred hHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHH
Confidence 999999999999999999999966 8899999999999863
No 63
>PHA02792 ankyrin-like protein; Provisional
Probab=99.72 E-value=3.7e-17 Score=137.87 Aligned_cols=136 Identities=19% Similarity=0.196 Sum_probs=113.9
Q ss_pred hhhhcccCCCCChHHHH-HHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHH-CCcHHHHHHHHHcCCCCCccc
Q 028370 25 FRSVIDTDDRGWTPLHI-GARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQ-GGHLEVMDVLLERGADIDART 102 (210)
Q Consensus 25 ~~~~~~~d~~g~t~L~~-A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~~~ 102 (210)
..+.+..+.+|.+++|+ |+.+|++|++++|+++|++++.. +..+.+|+++|+. .++.+++++|++.|+++...+
T Consensus 61 ~~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~----~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~ 136 (631)
T PHA02792 61 LSSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSI----KNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNI 136 (631)
T ss_pred HhCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCcccc----cCCCCcceeEeecCCCChHHHHHHHHCCCCccccc
Confidence 35566788899999977 66789999999999999999988 6778999999966 699999999999998743210
Q ss_pred ----------------------------------CCCCCChHHHHHHhcC-------CHHHHHHHHHcCCCCCCCCCCCC
Q 028370 103 ----------------------------------KGACGWTPLHTAAKER-------KKEAVRFLIENGAFLPDDINDSR 141 (210)
Q Consensus 103 ----------------------------------~~~~g~tpL~~A~~~g-------~~~~v~~Ll~~g~~~~~~~~~~~ 141 (210)
.+..|.||||+|+.++ +.+++++|+++|+++ +..|..
T Consensus 137 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~--~~~d~~ 214 (631)
T PHA02792 137 QYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEM--RYYTYR 214 (631)
T ss_pred ccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCc--CccCCC
Confidence 1233999999999999 899999999999966 888999
Q ss_pred CCCcccccccchHHHHHHHHHhhhh
Q 028370 142 FNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 142 g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|.||||+|+.......+++++|...
T Consensus 215 g~t~l~~~~~~~~i~~ei~~~L~~~ 239 (631)
T PHA02792 215 EHTTLYYYVDKCDIKREIFDALFDS 239 (631)
T ss_pred CChHHHHHHHcccchHHHHHHHHhc
Confidence 9999999996654468898888764
No 64
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.70 E-value=1e-16 Score=141.33 Aligned_cols=143 Identities=27% Similarity=0.239 Sum_probs=110.2
Q ss_pred hccchhHHHHHHhhHHHhhhhcccCCCCChHHH-HHHHcCCHHHHHHHHHCCCC--ccccc-------------------
Q 028370 8 EQLGPFTLQRKASRKRFFRSVIDTDDRGWTPLH-IGARKGDIKLVKQLLDEGMD--VNVAA------------------- 65 (210)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~-~A~~~g~~~~v~~Ll~~g~~--~~~~~------------------- 65 (210)
-+.|....+++...+.-..+++..|..|+|||| .|+.+++.++++.|++.|+. .....
T Consensus 25 ~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~~~~~~~v~~ll~~l 104 (743)
T TIGR00870 25 AERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEAILLHL 104 (743)
T ss_pred HHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCCCCCcChHHHHHHHhccHHHHHHHHHHH
Confidence 345666677666655334456778888999999 88888888888888887731 00000
Q ss_pred --cC---------------CCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccC------------CCCCChHHHHHHh
Q 028370 66 --WG---------------PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTK------------GACGWTPLHTAAK 116 (210)
Q Consensus 66 --~~---------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~------------~~~g~tpL~~A~~ 116 (210)
.. ....|.||||+|+..|+.+++++|+++|++++..+. ...|.||||.|+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~ 184 (743)
T TIGR00870 105 LAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAAC 184 (743)
T ss_pred hhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHH
Confidence 00 023589999999999999999999999999986532 2248899999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccc
Q 028370 117 ERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSL 152 (210)
Q Consensus 117 ~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~ 152 (210)
.|+.+++++|+++|+++ +..|..|+||||+|+..
T Consensus 185 ~~~~~iv~lLl~~gadi--n~~d~~g~T~Lh~A~~~ 218 (743)
T TIGR00870 185 LGSPSIVALLSEDPADI--LTADSLGNTLLHLLVME 218 (743)
T ss_pred hCCHHHHHHHhcCCcch--hhHhhhhhHHHHHHHhh
Confidence 99999999999999965 88999999999999854
No 65
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.69 E-value=7.3e-17 Score=142.29 Aligned_cols=130 Identities=26% Similarity=0.263 Sum_probs=106.4
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCcccccc----------CCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCccc
Q 028370 33 DRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAW----------GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDART 102 (210)
Q Consensus 33 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~----------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 102 (210)
..|.||||.|+.+|+.++++.|+++|++++.... .....|.||||.|+..|+.+++++|+++|++++..+
T Consensus 126 ~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d 205 (743)
T TIGR00870 126 TPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTAD 205 (743)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHh
Confidence 4699999999999999999999999999986421 012358999999999999999999999999999988
Q ss_pred CCCCCChHHHHHHhcC---------CHHHHHHHHHcCCCCC-C----CCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 103 KGACGWTPLHTAAKER---------KKEAVRFLIENGAFLP-D----DINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 103 ~~~~g~tpL~~A~~~g---------~~~~v~~Ll~~g~~~~-~----~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
.. |+||||+|+..+ ...+.++++..++... . .+.|..|.|||++|+..+ ..++++++.+.
T Consensus 206 ~~--g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g--~~~l~~lLL~~ 279 (743)
T TIGR00870 206 SL--GNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEG--RIVLFRLKLAI 279 (743)
T ss_pred hh--hhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcC--CccHHHHHHHH
Confidence 77 999999999986 3456777887766431 1 567999999999999544 46777777763
No 66
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.69 E-value=3.1e-16 Score=132.61 Aligned_cols=129 Identities=31% Similarity=0.400 Sum_probs=113.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCccccccC----CC---------------CCCCcHHHHHHHCCcHHHHHHHHHc
Q 028370 34 RGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWG----PK---------------SKGVTPLHLAAQGGHLEVMDVLLER 94 (210)
Q Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~----~~---------------~~g~t~L~~A~~~~~~~~v~~Ll~~ 94 (210)
.|+||||.|+.+.+.++|+.|++.|||++.+.-+ ++ ..|+.||.+|+..++.+++++|+++
T Consensus 183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~ 262 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH 262 (782)
T ss_pred cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc
Confidence 6999999999999999999999999999876421 11 1377899999999999999999999
Q ss_pred CCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 95 GADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 95 g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|+|++.+|.. |+|.||..+..-..++.++++++|++-...++|..|-|||-.|+ .-+..++.+.+.+.
T Consensus 263 gAd~~aqDS~--GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAa--klGk~emf~~ile~ 330 (782)
T KOG3676|consen 263 GADPNAQDSN--GNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAA--KLGKKEMFQHILER 330 (782)
T ss_pred CCCCCccccC--CChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHH--HhhhHHHHHHHHHh
Confidence 9999999998 99999999999999999999999996225999999999999999 44557777777665
No 67
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.68 E-value=1.4e-15 Score=114.74 Aligned_cols=134 Identities=38% Similarity=0.460 Sum_probs=115.6
Q ss_pred HhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCc-----HHHHHHHHHcCC--
Q 028370 24 FFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGH-----LEVMDVLLERGA-- 96 (210)
Q Consensus 24 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~-----~~~v~~Ll~~g~-- 96 (210)
........+..+.++++.++..+..+++.+++..|++++.. +..|.||+|+|+..++ .+++++|++.|+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~ 137 (235)
T COG0666 62 VDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAK----DADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADL 137 (235)
T ss_pred cccccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccc----cCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCC
Confidence 33344456667999999999999999999999999999888 9999999999999999 999999999999
Q ss_pred -CCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 97 -DIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 97 -~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
..+.++.. |.||||+|+..|+.+++++|++.|+++ ..++..|.|++++|+.. +..++++.+....
T Consensus 138 ~~~~~~~~~--g~tpl~~A~~~~~~~~~~~ll~~~~~~--~~~~~~g~t~l~~a~~~--~~~~~~~~l~~~~ 203 (235)
T COG0666 138 DVNNLRDED--GNTPLHWAALNGDADIVELLLEAGADP--NSRNSYGVTALDPAAKN--GRIELVKLLLDKG 203 (235)
T ss_pred CCccccCCC--CCchhHHHHHcCchHHHHHHHhcCCCC--cccccCCCcchhhhccc--chHHHHHHHHhcC
Confidence 45555666 999999999999999999999999965 88899999999999944 4567777666643
No 68
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.67 E-value=8.9e-17 Score=134.68 Aligned_cols=131 Identities=29% Similarity=0.374 Sum_probs=118.5
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
++.+.+|.+|.|+||.|+.+|+.+++++|++..+-+++. +..|.+|||+|++.|+.++++.++..+..++..+..
T Consensus 40 ds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~----d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e- 114 (854)
T KOG0507|consen 40 DSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLC----DTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIE- 114 (854)
T ss_pred ccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhh----hccCcceEEehhhcCcchHHHHHHhcccCCCccccc-
Confidence 556779999999999999999999999999999888887 889999999999999999999999998888888777
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|.||||.|+..|+.+++.+|+.+|+ +..++|+.++|+++.|++.+ ..++++.+...
T Consensus 115 -~~tplhlaaqhgh~dvv~~Ll~~~a--dp~i~nns~~t~ldlA~qfg--r~~Vvq~ll~~ 170 (854)
T KOG0507|consen 115 -NETPLHLAAQHGHLEVVFYLLKKNA--DPFIRNNSKETVLDLASRFG--RAEVVQMLLQK 170 (854)
T ss_pred -CcCccchhhhhcchHHHHHHHhcCC--CccccCcccccHHHHHHHhh--hhHHHHHHhhh
Confidence 9999999999999999999999999 55999999999999999654 46777766665
No 69
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.67 E-value=4e-16 Score=126.21 Aligned_cols=125 Identities=29% Similarity=0.454 Sum_probs=111.7
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcC
Q 028370 39 LHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKER 118 (210)
Q Consensus 39 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g 118 (210)
|.-|+..|.+++|+..+..-.|+..- +..|.|+||.|+..||.+||+||+++|+++|..|.+ |+||||+|+.++
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpSqp----NdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSd--GWTPLHCAASCN 627 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPSQP----NDEGITALHNAICAGHYEIVKFLIEFGANVNAADSD--GWTPLHCAASCN 627 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCCCC----CccchhHHhhhhhcchhHHHHHHHhcCCcccCccCC--CCchhhhhhhcC
Confidence 34588889999999999988888766 899999999999999999999999999999999999 999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhcC
Q 028370 119 KKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAG 170 (210)
Q Consensus 119 ~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~~ 170 (210)
++.+|+.|++.|+-+ .-.+-.++.|+..-|-....++....++|.......
T Consensus 628 nv~~ckqLVe~Gaav-fAsTlSDmeTa~eKCee~eeGY~~CsqyL~~vqesm 678 (752)
T KOG0515|consen 628 NVPMCKQLVESGAAV-FASTLSDMETAAEKCEEMEEGYDQCSQYLYGVQESM 678 (752)
T ss_pred chHHHHHHHhccceE-EeeecccccchhhhcchhhhhHHHHHHHHHHHHHhh
Confidence 999999999999854 355667778999999988999999999998775553
No 70
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.65 E-value=9.2e-17 Score=121.52 Aligned_cols=115 Identities=33% Similarity=0.556 Sum_probs=96.3
Q ss_pred HHcCCHHHHHHHHHC-CCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHH
Q 028370 43 ARKGDIKLVKQLLDE-GMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKE 121 (210)
Q Consensus 43 ~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~ 121 (210)
|+.|+.-.|+.-++. .-|.|.- |..|-+|||||++.|+..+++.|+..|+.++..+.. ..||||+|+..|+.+
T Consensus 8 cregna~qvrlwld~tehdln~g----ddhgfsplhwaakegh~aivemll~rgarvn~tnmg--ddtplhlaaahghrd 81 (448)
T KOG0195|consen 8 CREGNAFQVRLWLDDTEHDLNVG----DDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMG--DDTPLHLAAAHGHRD 81 (448)
T ss_pred hhcCCeEEEEEEecCcccccccc----cccCcchhhhhhhcccHHHHHHHHhcccccccccCC--CCcchhhhhhcccHH
Confidence 455554444444433 3455555 788999999999999999999999999999998877 789999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 122 AVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 122 ~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
+|+.|++..+++ +..|..|+||||||+ -|++..+.+-|....
T Consensus 82 ivqkll~~kadv--navnehgntplhyac--fwgydqiaedli~~g 123 (448)
T KOG0195|consen 82 IVQKLLSRKADV--NAVNEHGNTPLHYAC--FWGYDQIAEDLISCG 123 (448)
T ss_pred HHHHHHHHhccc--chhhccCCCchhhhh--hhcHHHHHHHHHhcc
Confidence 999999999977 999999999999999 888888887766543
No 71
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.63 E-value=4e-15 Score=129.18 Aligned_cols=105 Identities=36% Similarity=0.423 Sum_probs=95.6
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhc
Q 028370 38 PLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKE 117 (210)
Q Consensus 38 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~ 117 (210)
.|+.|+..|+.+.++.|++.|++++.. |..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~----d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~--G~TpLh~A~~~ 158 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCR----DYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKD--GKTPLELAEEN 158 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCc----CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC--CCCHHHHHHHC
Confidence 488999999999999999999999988 899999999999999999999999999999999887 99999999999
Q ss_pred CCHHHHHHHHHc-------CCCCCCCCCCCCCCCcccccc
Q 028370 118 RKKEAVRFLIEN-------GAFLPDDINDSRFNPPLHYCP 150 (210)
Q Consensus 118 g~~~~v~~Ll~~-------g~~~~~~~~~~~g~t~l~~a~ 150 (210)
|+.+++++|+.+ |++. ...+..|.+|+..+.
T Consensus 159 g~~~iv~~Ll~~~~~~~~~ga~~--~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 159 GFREVVQLLSRHSQCHFELGANA--KPDSFTGKPPSLEDS 196 (664)
T ss_pred CcHHHHHHHHhCCCcccccCCCC--CccccCCCCccchhh
Confidence 999999999999 7754 677777777765443
No 72
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.63 E-value=1.8e-15 Score=122.62 Aligned_cols=125 Identities=33% Similarity=0.550 Sum_probs=112.0
Q ss_pred HHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCcccccc------------------------------------
Q 028370 23 RFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAW------------------------------------ 66 (210)
Q Consensus 23 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~------------------------------------ 66 (210)
.+..+++.+|..|+||||.|+-.|+..++++|++.|++.....-
T Consensus 94 e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~ 173 (527)
T KOG0505|consen 94 ENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAE 173 (527)
T ss_pred HhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhh
Confidence 45778899999999999999999999999999999886654430
Q ss_pred -------------------CCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHH
Q 028370 67 -------------------GPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLI 127 (210)
Q Consensus 67 -------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 127 (210)
.+...|-|.||.|+..|..++.++|+..|.+++.++.+ |+||||.|+.-|..+++++|+
T Consensus 174 e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~d--gWtPlHAAA~Wg~~~~~elL~ 251 (527)
T KOG0505|consen 174 EQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYD--GWTPLHAAAHWGQEDACELLV 251 (527)
T ss_pred HHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCccccccc--CCCcccHHHHhhhHhHHHHHH
Confidence 13334889999999999999999999999999999998 999999999999999999999
Q ss_pred HcCCCCCCCCCCCCCCCccccccc
Q 028370 128 ENGAFLPDDINDSRFNPPLHYCPS 151 (210)
Q Consensus 128 ~~g~~~~~~~~~~~g~t~l~~a~~ 151 (210)
++|+++ +.....|+||+++|..
T Consensus 252 ~~ga~~--d~~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 252 EHGADM--DAKTKMGETPLDVADE 273 (527)
T ss_pred Hhhccc--chhhhcCCCCccchhh
Confidence 999966 8999999999999974
No 73
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.62 E-value=2e-15 Score=98.23 Aligned_cols=82 Identities=43% Similarity=0.613 Sum_probs=72.8
Q ss_pred HHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHH
Q 028370 76 LHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWA 155 (210)
Q Consensus 76 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~ 155 (210)
||+|+..|+.+++++|++.+.+++. |+||||+|+..|+.+++++|+++|+++ +.++.+|.||||+|+.. +
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~------~~~~l~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~--~ 70 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL------GNTALHYAAENGNLEIVKLLLENGADI--NSQDKNGNTALHYAAEN--G 70 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS------SSBHHHHHHHTTTHHHHHHHHHTTTCT--T-BSTTSSBHHHHHHHT--T
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC------CCCHHHHHHHcCCHHHHHHHHHhcccc--cccCCCCCCHHHHHHHc--C
Confidence 7999999999999999999888764 679999999999999999999999965 88899999999999954 4
Q ss_pred HHHHHHHhhhhh
Q 028370 156 YEEMMRFQRESF 167 (210)
Q Consensus 156 ~~~~~~~l~~~~ 167 (210)
..+++++|.+..
T Consensus 71 ~~~~~~~Ll~~g 82 (89)
T PF12796_consen 71 NLEIVKLLLEHG 82 (89)
T ss_dssp HHHHHHHHHHTT
T ss_pred CHHHHHHHHHcC
Confidence 588999988763
No 74
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.57 E-value=1e-14 Score=85.76 Aligned_cols=54 Identities=54% Similarity=0.876 Sum_probs=30.3
Q ss_pred CCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHH
Q 028370 72 GVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLI 127 (210)
Q Consensus 72 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 127 (210)
|.||||+|+..|+.+++++|++.|++++.++.+ |+||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~--g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDED--GRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TT--S--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCC--CCCHHHHHHHccCHHHHHHHC
Confidence 456666666666666666666666666666554 666666666666666666654
No 75
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.55 E-value=1.7e-14 Score=84.84 Aligned_cols=54 Identities=46% Similarity=0.860 Sum_probs=46.4
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHH
Q 028370 35 GWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLL 92 (210)
Q Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 92 (210)
|+||||+|++.|+.+++++|++.|++++.. |.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~----d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQ----DEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-----TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHccCHHHHHHHC
Confidence 789999999999999999999999999988 999999999999999999999986
No 76
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.54 E-value=9.1e-14 Score=105.23 Aligned_cols=100 Identities=33% Similarity=0.395 Sum_probs=88.2
Q ss_pred hhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCC
Q 028370 25 FRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKG 104 (210)
Q Consensus 25 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 104 (210)
++..+..|..|.|+|..|+++|+.++++.|++.|+|+|... +..+.||||+|+.+|+.++.++|++.|+.....+.-
T Consensus 35 vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~q---hg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsv 111 (396)
T KOG1710|consen 35 VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQ---HGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSV 111 (396)
T ss_pred hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCccc---ccccccHHHHHHHcCCchHHHHHHhccCccccccch
Confidence 56678899999999999999999999999999999998764 677889999999999999999999999988877766
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHc
Q 028370 105 ACGWTPLHTAAKERKKEAVRFLIEN 129 (210)
Q Consensus 105 ~~g~tpL~~A~~~g~~~~v~~Ll~~ 129 (210)
|+|+-.+|+.-|+.+||.++-.+
T Consensus 112 --grTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 112 --GRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred --hhhHHHHHHHhcchHHHHHHhcc
Confidence 99999999999999998877554
No 77
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.52 E-value=8.1e-15 Score=86.75 Aligned_cols=50 Identities=46% Similarity=0.641 Sum_probs=17.2
Q ss_pred CCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCccccc
Q 028370 96 ADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYC 149 (210)
Q Consensus 96 ~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a 149 (210)
++++.++.. |+||||+|+..|+.+++++|++.|+++ +.+|..|+||+|+|
T Consensus 7 ~~~n~~d~~--G~T~LH~A~~~g~~~~v~~Ll~~g~d~--~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 7 ADVNAQDKY--GNTPLHWAARYGHSEVVRLLLQNGADP--NAKDKDGQTPLHYA 56 (56)
T ss_dssp --TT---TT--S--HHHHHHHHT-HHHHHHHHHCT--T--T---TTS--HHHH-
T ss_pred CCCcCcCCC--CCcHHHHHHHcCcHHHHHHHHHCcCCC--CCCcCCCCCHHHhC
Confidence 444444443 555555555555555555555555533 55555555555543
No 78
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.52 E-value=5.7e-14 Score=88.85 Aligned_cols=94 Identities=26% Similarity=0.418 Sum_probs=75.8
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDV 90 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (210)
|.+..+...-.+. .+.+.+ ..|++|||+|+-.|+++++++|+..|++++.. |..|.|||..|++.||.++|++
T Consensus 13 G~~DeVk~~v~~g--~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i~~k----DKygITPLLsAvwEGH~~cVkl 85 (117)
T KOG4214|consen 13 GEIDEVKQSVNEG--LNVNEI-YGGRTPLHYAADYGQLSILEFLISIGANIQDK----DKYGITPLLSAVWEGHRDCVKL 85 (117)
T ss_pred CcHHHHHHHHHcc--ccHHHH-hCCcccchHhhhcchHHHHHHHHHhccccCCc----cccCCcHHHHHHHHhhHHHHHH
Confidence 4555555443333 122222 27999999999999999999999999999988 9999999999999999999999
Q ss_pred HHHcCCCCCcccCCCCCChHHHH
Q 028370 91 LLERGADIDARTKGACGWTPLHT 113 (210)
Q Consensus 91 Ll~~g~~~~~~~~~~~g~tpL~~ 113 (210)
|+++|++-.....+ |.+.+-.
T Consensus 86 LL~~GAdrt~~~Pd--G~~~~ea 106 (117)
T KOG4214|consen 86 LLQNGADRTIHAPD--GTALIEA 106 (117)
T ss_pred HHHcCcccceeCCC--chhHHhh
Confidence 99999998888777 7655443
No 79
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.51 E-value=7.9e-14 Score=117.29 Aligned_cols=137 Identities=31% Similarity=0.305 Sum_probs=110.0
Q ss_pred hhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCC
Q 028370 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGAC 106 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 106 (210)
.+.-.|..|.+|||+|+..|+.++++.++..+..+|.. +..|.||||.|+..|+.+++.+|+.+|+++-+.+..
T Consensus 74 ~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~----~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns-- 147 (854)
T KOG0507|consen 74 LLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAV----NIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNS-- 147 (854)
T ss_pred hhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcc----cccCcCccchhhhhcchHHHHHHHhcCCCccccCcc--
Confidence 34457788999999999999999999999888777777 788999999999999999999999999998877766
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCC------CCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhcCC
Q 028370 107 GWTPLHTAAKERKKEAVRFLIENGAF------LPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGE 171 (210)
Q Consensus 107 g~tpL~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~~~ 171 (210)
+.|+|..|++.|..++++.|++..-. ++...+...+.+|+|.|+ .++..++++.+++......
T Consensus 148 ~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaa--kngh~~~~~~ll~ag~din 216 (854)
T KOG0507|consen 148 KETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAA--KNGHVECMQALLEAGFDIN 216 (854)
T ss_pred cccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhh--hcchHHHHHHHHhcCCCcc
Confidence 88999999999999999998886221 112455667788999988 4455788888887655543
No 80
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.51 E-value=2.2e-14 Score=84.91 Aligned_cols=55 Identities=55% Similarity=0.789 Sum_probs=21.3
Q ss_pred HHHCC-CCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHH
Q 028370 54 LLDEG-MDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTA 114 (210)
Q Consensus 54 Ll~~g-~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A 114 (210)
|+++| ++++.. |..|.||||+|+..|+.+++++|++.|++++.++.. |.||||+|
T Consensus 1 LL~~~~~~~n~~----d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~--G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQ----DKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKD--GQTPLHYA 56 (56)
T ss_dssp -----T--TT-------TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TT--S--HHHH-
T ss_pred CCccCcCCCcCc----CCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCC--CCCHHHhC
Confidence 34445 455555 566666666666666666666666666666666555 66666654
No 81
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.49 E-value=1.1e-12 Score=89.79 Aligned_cols=93 Identities=49% Similarity=0.831 Sum_probs=85.8
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCC
Q 028370 29 IDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGW 108 (210)
Q Consensus 29 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~ 108 (210)
+..+..|.||+|.|+..++.+++++|++.+++++.. +..|.||+|+|+..++.+++++|++.+.+++..+.. |.
T Consensus 34 ~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~----~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~--~~ 107 (126)
T cd00204 34 NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNAR----DKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKD--GR 107 (126)
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc----CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCC--CC
Confidence 578889999999999999999999999999877776 788999999999999999999999999888887766 89
Q ss_pred hHHHHHHhcCCHHHHHHHH
Q 028370 109 TPLHTAAKERKKEAVRFLI 127 (210)
Q Consensus 109 tpL~~A~~~g~~~~v~~Ll 127 (210)
||+++|...++.+++++|+
T Consensus 108 ~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 108 TPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred CHHHHHHhcCCHHHHHHhC
Confidence 9999999999999999884
No 82
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.49 E-value=1.6e-13 Score=103.94 Aligned_cols=121 Identities=26% Similarity=0.351 Sum_probs=104.4
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHH
Q 028370 35 GWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTA 114 (210)
Q Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A 114 (210)
-..||..++..++.+.+..|++.--+++.+ |..|.|+|..|+..|+.+++++|++.|+|+|...... +.||||+|
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~----D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~-~YTpLmFA 86 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTVRQVNQR----DPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGT-LYTPLMFA 86 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHhhhhhcc----CCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccc-cccHHHHH
Confidence 467999999999999999999886668877 9999999999999999999999999999999876543 88999999
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhh
Q 028370 115 AKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQR 164 (210)
Q Consensus 115 ~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~ 164 (210)
+.+|+.+++++|++.|+.. ...|.-|.|+-++|+-. +..+.+..+.
T Consensus 87 ALSGn~dvcrllldaGa~~--~~vNsvgrTAaqmAAFV--G~H~CV~iIN 132 (396)
T KOG1710|consen 87 ALSGNQDVCRLLLDAGARM--YLVNSVGRTAAQMAAFV--GHHECVAIIN 132 (396)
T ss_pred HHcCCchHHHHHHhccCcc--ccccchhhhHHHHHHHh--cchHHHHHHh
Confidence 9999999999999999955 88999999999998833 3344444433
No 83
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.48 E-value=2e-13 Score=115.77 Aligned_cols=146 Identities=27% Similarity=0.245 Sum_probs=114.5
Q ss_pred hhHHHhhhhcccCCCCChHHHHHHHc---CCHHHHHHHHHCCCCccccc-cCCCCCCCcHHHHHHHCCcHHHHHHHHHcC
Q 028370 20 SRKRFFRSVIDTDDRGWTPLHIGARK---GDIKLVKQLLDEGMDVNVAA-WGPKSKGVTPLHLAAQGGHLEVMDVLLERG 95 (210)
Q Consensus 20 ~~~~~~~~~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 95 (210)
.++...-+++.+-..|.|.||.|.-+ ++.++++.|++.-+...... -+-...|.||||+|+.+.+.++|++|++.|
T Consensus 128 k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~g 207 (782)
T KOG3676|consen 128 KYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAG 207 (782)
T ss_pred hhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcC
Confidence 34445566666777899999999985 45588999998754221100 000456999999999999999999999999
Q ss_pred CCCCcccCC---------------------CCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchH
Q 028370 96 ADIDARTKG---------------------ACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEW 154 (210)
Q Consensus 96 ~~~~~~~~~---------------------~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~ 154 (210)
+|++.+... ..|+.||.+|+-.++.+|+++|+++|+|+ +.+|..|+|.||.++ -.
T Consensus 208 ADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~--~aqDS~GNTVLH~lV--i~ 283 (782)
T KOG3676|consen 208 ADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADP--NAQDSNGNTVLHMLV--IH 283 (782)
T ss_pred CchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCC--CccccCCChHHHHHH--HH
Confidence 999876321 24889999999999999999999999965 999999999999988 44
Q ss_pred HHHHHHHHhhhhhhc
Q 028370 155 AYEEMMRFQRESFSA 169 (210)
Q Consensus 155 ~~~~~~~~l~~~~~~ 169 (210)
-..++.+.+.+....
T Consensus 284 ~~~~My~~~L~~ga~ 298 (782)
T KOG3676|consen 284 FVTEMYDLALELGAN 298 (782)
T ss_pred HHHHHHHHHHhcCCC
Confidence 567787777776555
No 84
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.45 E-value=5.4e-13 Score=100.54 Aligned_cols=99 Identities=40% Similarity=0.621 Sum_probs=91.0
Q ss_pred hhhcccCCCCChHHHHHHHcCC-----HHHHHHHHHCCC---CccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGD-----IKLVKQLLDEGM---DVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGAD 97 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~-----~~~v~~Ll~~g~---~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 97 (210)
.+++.+|..|.||||+|+..++ .++++.|++.|+ ..+.. +..|.||||+|+..|+.+++++|+..|++
T Consensus 97 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~----~~~g~tpl~~A~~~~~~~~~~~ll~~~~~ 172 (235)
T COG0666 97 ADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLR----DEDGNTPLHWAALNGDADIVELLLEAGAD 172 (235)
T ss_pred CCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCcccc----CCCCCchhHHHHHcCchHHHHHHHhcCCC
Confidence 3447899999999999999999 999999999999 44455 89999999999999999999999999999
Q ss_pred CCcccCCCCCChHHHHHHhcCCHHHHHHHHHcC
Q 028370 98 IDARTKGACGWTPLHTAAKERKKEAVRFLIENG 130 (210)
Q Consensus 98 ~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g 130 (210)
++..+.. |.|++++|+..++.++++.++..+
T Consensus 173 ~~~~~~~--g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 173 PNSRNSY--GVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CcccccC--CCcchhhhcccchHHHHHHHHhcC
Confidence 9988766 999999999999999999999976
No 85
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.36 E-value=3.1e-12 Score=103.99 Aligned_cols=113 Identities=28% Similarity=0.348 Sum_probs=95.8
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDV 90 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (210)
|.|.++.+.-.+ +.+....|..|.|+||-|+-.|+.++|++|++.|+++|.. |.+||||||.|+..++..+++.
T Consensus 561 GEldlVq~~i~e--v~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~----DSdGWTPLHCAASCNnv~~ckq 634 (752)
T KOG0515|consen 561 GELDLVQRIIYE--VTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAA----DSDGWTPLHCAASCNNVPMCKQ 634 (752)
T ss_pred chHHHHHHHHHh--hcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCc----cCCCCchhhhhhhcCchHHHHH
Confidence 667777765543 4567789999999999999999999999999999999998 9999999999999999999999
Q ss_pred HHHcCCCCCcccCCCCCChHHHHH--HhcCCHHHHHHHHHcC
Q 028370 91 LLERGADIDARTKGACGWTPLHTA--AKERKKEAVRFLIENG 130 (210)
Q Consensus 91 Ll~~g~~~~~~~~~~~g~tpL~~A--~~~g~~~~v~~Ll~~g 130 (210)
|++.|+-+-..+.. ++.|+..-+ -..|..+|.++|....
T Consensus 635 LVe~GaavfAsTlS-DmeTa~eKCee~eeGY~~CsqyL~~vq 675 (752)
T KOG0515|consen 635 LVESGAAVFASTLS-DMETAAEKCEEMEEGYDQCSQYLYGVQ 675 (752)
T ss_pred HHhccceEEeeecc-cccchhhhcchhhhhHHHHHHHHHHHH
Confidence 99999887665433 388887665 4567899999997653
No 86
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.33 E-value=9.5e-13 Score=114.89 Aligned_cols=131 Identities=25% Similarity=0.304 Sum_probs=116.7
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChH
Q 028370 31 TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTP 110 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tp 110 (210)
....-.|+|..||..|+.|.+++|+.+|+++..+ |..|-+||.+|+-.||..+|+.|+.+.++++.+. +..+.|+
T Consensus 753 Te~n~~t~LT~acaggh~e~vellv~rganiehr----dkkgf~plImaatagh~tvV~~llk~ha~veaQs-drtkdt~ 827 (2131)
T KOG4369|consen 753 TEPNIKTNLTSACAGGHREEVELLVVRGANIEHR----DKKGFVPLIMAATAGHITVVQDLLKAHADVEAQS-DRTKDTM 827 (2131)
T ss_pred cCccccccccccccCccHHHHHHHHHhccccccc----ccccchhhhhhcccCchHHHHHHHhhhhhhhhhc-ccccCce
Confidence 3445679999999999999999999999999888 9999999999999999999999999999998874 3448999
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhcC
Q 028370 111 LHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAG 170 (210)
Q Consensus 111 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~~ 170 (210)
|.+||..|+.++|++|+.+|+ +...++....|||.+|. ..++.+|+..+.....+.
T Consensus 828 lSlacsggr~~vvelLl~~ga--nkehrnvsDytPlsla~--Sggy~~iI~~llS~GseI 883 (2131)
T KOG4369|consen 828 LSLACSGGRTRVVELLLNAGA--NKEHRNVSDYTPLSLAR--SGGYTKIIHALLSSGSEI 883 (2131)
T ss_pred EEEecCCCcchHHHHHHHhhc--cccccchhhcCchhhhc--CcchHHHHHHHhhccccc
Confidence 999999999999999999999 66888999999999998 456789999888877553
No 87
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.30 E-value=7e-12 Score=109.15 Aligned_cols=86 Identities=29% Similarity=0.378 Sum_probs=78.4
Q ss_pred HHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchH
Q 028370 75 PLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEW 154 (210)
Q Consensus 75 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~ 154 (210)
.|+.|+..|+.+++++|+..|++++..+.. |.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~--G~TpLh~Aa~~g~~eiv~~LL~~Gadv--n~~d~~G~TpLh~A~~~-- 158 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYD--GRTPLHIACANGHVQVVRVLLEFGADP--TLLDKDGKTPLELAEEN-- 158 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCC--CCcHHHHHHHCCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHC--
Confidence 588999999999999999999999998877 999999999999999999999999966 89999999999999954
Q ss_pred HHHHHHHHhhhh
Q 028370 155 AYEEMMRFQRES 166 (210)
Q Consensus 155 ~~~~~~~~l~~~ 166 (210)
+..+++++|...
T Consensus 159 g~~~iv~~Ll~~ 170 (664)
T PTZ00322 159 GFREVVQLLSRH 170 (664)
T ss_pred CcHHHHHHHHhC
Confidence 457888888776
No 88
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.20 E-value=1.3e-10 Score=94.08 Aligned_cols=101 Identities=33% Similarity=0.454 Sum_probs=88.6
Q ss_pred HhhhhcccCCCCCh------HHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCC
Q 028370 24 FFRSVIDTDDRGWT------PLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGAD 97 (210)
Q Consensus 24 ~~~~~~~~d~~g~t------~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 97 (210)
|+..+..+|.+|-+ -||.+++.|++++.-.|+..|+++|... -..|.||||.|++.|+..-+++|+-+|+|
T Consensus 116 Fv~~~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~h---pekg~TpLHvAAk~Gq~~Q~ElL~vYGAD 192 (669)
T KOG0818|consen 116 FVHRLPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFH---PEKGNTPLHVAAKAGQILQAELLAVYGAD 192 (669)
T ss_pred eeccCCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCC---cccCCchhHHHHhccchhhhhHHhhccCC
Confidence 44445567888766 5899999999999999999999999873 46799999999999999999999999999
Q ss_pred CCcccCCCCCChHHHHHHhcCCHHHHHHHHHc
Q 028370 98 IDARTKGACGWTPLHTAAKERKKEAVRFLIEN 129 (210)
Q Consensus 98 ~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 129 (210)
++..+.. |.||+.+|-..|+.++.+-|++.
T Consensus 193 ~~a~d~~--GmtP~~~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 193 PGAQDSS--GMTPVDYARQGGHHELAERLVEI 222 (669)
T ss_pred CCCCCCC--CCcHHHHHHhcCchHHHHHHHHH
Confidence 9999988 99999999999998887766654
No 89
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.14 E-value=3.7e-11 Score=105.30 Aligned_cols=135 Identities=24% Similarity=0.340 Sum_probs=99.2
Q ss_pred hhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCC
Q 028370 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGAC 106 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 106 (210)
++.-+|+.|.+||-.|+-.|+..+|..|+.+.+++.... |+.+.|+|.+||..|..++|++|+..|++-..++-.
T Consensus 782 niehrdkkgf~plImaatagh~tvV~~llk~ha~veaQs---drtkdt~lSlacsggr~~vvelLl~~gankehrnvs-- 856 (2131)
T KOG4369|consen 782 NIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQS---DRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVS-- 856 (2131)
T ss_pred cccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhc---ccccCceEEEecCCCcchHHHHHHHhhccccccchh--
Confidence 344478888888888888888888888888888877654 777788888888888888888888877766555544
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 107 GWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 107 g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
..|||.+|...|..++++.|+..|++|+...-.+.|-.||..|.-++ ..+-.+.+.+...
T Consensus 857 DytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmng--h~~at~~ll~~gs 916 (2131)
T KOG4369|consen 857 DYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNG--HQAATLSLLQPGS 916 (2131)
T ss_pred hcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhcc--ccHHHHHHhcccc
Confidence 56888888888888888888888877766666677777777776433 3455555555433
No 90
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.07 E-value=2.1e-10 Score=92.41 Aligned_cols=95 Identities=31% Similarity=0.465 Sum_probs=84.9
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHH-cCCCCCcccCCCCCCh
Q 028370 31 TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLE-RGADIDARTKGACGWT 109 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~g~t 109 (210)
++.++..++++|++.|++..++.+.-.|.|+... |.+.+|+||.|+..|+.+++++|++ .+.+++..+++ |+|
T Consensus 502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~----DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw--~rt 575 (622)
T KOG0506|consen 502 RENDTVINVMYAAKNGDLSALRRFALQGMDLETK----DYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRW--GRT 575 (622)
T ss_pred ccccchhhhhhhhhcCCHHHHHHHHHhccccccc----ccccchhheeecccCceeHHHHHHHHHcCCCChhhcc--CCC
Confidence 4556777899999999999999999999999988 9999999999999999999999998 57888888888 999
Q ss_pred HHHHHHhcCCHHHHHHHHHcCC
Q 028370 110 PLHTAAKERKKEAVRFLIENGA 131 (210)
Q Consensus 110 pL~~A~~~g~~~~v~~Ll~~g~ 131 (210)
||.-|...++.+++++|-+.-.
T Consensus 576 PlDdA~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 576 PLDDAKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred cchHhHhcCcHHHHHHHHHHhc
Confidence 9999999999999999987643
No 91
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.04 E-value=7.1e-11 Score=100.79 Aligned_cols=82 Identities=30% Similarity=0.478 Sum_probs=41.5
Q ss_pred hcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCC
Q 028370 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACG 107 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g 107 (210)
.+.+|..|+|+||.|+..+..+++++|+++|++++... ...|+||||-|+..|+.+++-+|+.+|.++..+|.+ |
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD---~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dke--g 119 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQD---EESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKE--G 119 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeecc---ccccchHhhHhhhhchHHHHHHHHhcCCceEEeccc--C
Confidence 34455555555555555555555555555555554442 233555555555555555555555555555444444 5
Q ss_pred ChHHHHH
Q 028370 108 WTPLHTA 114 (210)
Q Consensus 108 ~tpL~~A 114 (210)
.+||..-
T Consensus 120 lsplq~~ 126 (1267)
T KOG0783|consen 120 LSPLQFL 126 (1267)
T ss_pred CCHHHHH
Confidence 5555443
No 92
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=99.03 E-value=2.3e-09 Score=88.37 Aligned_cols=117 Identities=26% Similarity=0.307 Sum_probs=92.6
Q ss_pred hHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHH
Q 028370 13 FTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLL 92 (210)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 92 (210)
-|+.+|+-.+.|..-+-.....=-.-|..|+...++..+-+|+.+|....+..-..+.+|+|+||.||+.|+..+.++|+
T Consensus 602 rwIr~KYeqklFLaPl~~te~~lgqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLi 681 (749)
T KOG0705|consen 602 RWIRAKYEQKLFLAPLPCTEEPLGQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLI 681 (749)
T ss_pred HHHHHHHHHHhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHH
Confidence 35666666666666554444433345778888899999999999985332211111667899999999999999999999
Q ss_pred HcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCC
Q 028370 93 ERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGA 131 (210)
Q Consensus 93 ~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 131 (210)
=+|+|+...+.. |+|+|.||-+.|.-+|+..|+.+|+
T Consensus 682 Wyg~dv~~rda~--g~t~l~yar~a~sqec~d~llq~gc 718 (749)
T KOG0705|consen 682 WYGVDVMARDAH--GRTALFYARQAGSQECIDVLLQYGC 718 (749)
T ss_pred HhCccceecccC--CchhhhhHhhcccHHHHHHHHHcCC
Confidence 999999888776 9999999999999999999999998
No 93
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.00 E-value=3.4e-10 Score=96.74 Aligned_cols=80 Identities=26% Similarity=0.407 Sum_probs=75.7
Q ss_pred CCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccc
Q 028370 69 KSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHY 148 (210)
Q Consensus 69 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~ 148 (210)
|..|+|+||+|+..+..++++||+++|+++..+|... |.||||-|+..|+++|+-+|+.+|+.+ .+.|.+|.+||++
T Consensus 49 D~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ES-G~taLHRaiyyG~idca~lLL~~g~SL--~i~Dkeglsplq~ 125 (1267)
T KOG0783|consen 49 DRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEES-GYTALHRAIYYGNIDCASLLLSKGRSL--RIKDKEGLSPLQF 125 (1267)
T ss_pred HhhccceeeeeeccchhHHHHHHHhcCceeeeccccc-cchHhhHhhhhchHHHHHHHHhcCCce--EEecccCCCHHHH
Confidence 8999999999999999999999999999999998875 999999999999999999999999965 9999999999998
Q ss_pred ccc
Q 028370 149 CPS 151 (210)
Q Consensus 149 a~~ 151 (210)
.+.
T Consensus 126 ~~r 128 (1267)
T KOG0783|consen 126 LSR 128 (1267)
T ss_pred Hhh
Confidence 764
No 94
>PF13606 Ank_3: Ankyrin repeat
Probab=98.93 E-value=1.7e-09 Score=55.03 Aligned_cols=28 Identities=57% Similarity=0.952 Sum_probs=17.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCcc
Q 028370 35 GWTPLHIGARKGDIKLVKQLLDEGMDVN 62 (210)
Q Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 62 (210)
|+||||+||+.|+.+++++|+++|+|++
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 5666666666666666666666666554
No 95
>PF13606 Ank_3: Ankyrin repeat
Probab=98.86 E-value=4.2e-09 Score=53.60 Aligned_cols=27 Identities=48% Similarity=0.706 Sum_probs=19.4
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCCC
Q 028370 107 GWTPLHTAAKERKKEAVRFLIENGAFL 133 (210)
Q Consensus 107 g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 133 (210)
|+||||+||..|+.+++++|+++|+++
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 667777777777777777777777754
No 96
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.82 E-value=9.3e-09 Score=84.92 Aligned_cols=117 Identities=21% Similarity=0.329 Sum_probs=94.6
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCC--CCcccCCCCCChHHHHHHh
Q 028370 39 LHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGAD--IDARTKGACGWTPLHTAAK 116 (210)
Q Consensus 39 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~~~g~tpL~~A~~ 116 (210)
|..|+..+++--+.....+|.++... +.+..+.||+|+..|+.++|++++++|.. +++-+.. |+|+||-|+.
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll~~----~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~--get~lhkaa~ 943 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLLIQ----GPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADET--GETALHKAAC 943 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceEee----CcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhh--hhHHHHHHHH
Confidence 56777888877777777888887777 77888999999999999999999999875 4555555 9999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhh
Q 028370 117 ERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRE 165 (210)
Q Consensus 117 ~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~ 165 (210)
.++..++++|++.|+.+ ..+|..|.||-.-|-..+ ..++..+|..
T Consensus 944 ~~~r~vc~~lvdagasl--~ktd~kg~tp~eraqqa~--d~dlaayle~ 988 (1004)
T KOG0782|consen 944 QRNRAVCQLLVDAGASL--RKTDSKGKTPQERAQQAG--DPDLAAYLES 988 (1004)
T ss_pred hcchHHHHHHHhcchhh--eecccCCCChHHHHHhcC--CchHHHHHhh
Confidence 99999999999999966 888999999988775322 2455555443
No 97
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.78 E-value=1.3e-08 Score=53.09 Aligned_cols=30 Identities=47% Similarity=0.757 Sum_probs=17.6
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCcccc
Q 028370 35 GWTPLHIGARKGDIKLVKQLLDEGMDVNVA 64 (210)
Q Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~ 64 (210)
|+||||+|+..|+.+++++|+++|++++.+
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~ 31 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADINAR 31 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCTTCB
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 556666666666666666666666555543
No 98
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.77 E-value=1.6e-08 Score=52.73 Aligned_cols=27 Identities=41% Similarity=0.660 Sum_probs=18.3
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCCC
Q 028370 107 GWTPLHTAAKERKKEAVRFLIENGAFL 133 (210)
Q Consensus 107 g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 133 (210)
|.||||+|+..|+.+++++|+++|+++
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~ 28 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADI 28 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCT
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCC
Confidence 666677766666666677776666644
No 99
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.75 E-value=2.8e-08 Score=80.81 Aligned_cols=77 Identities=31% Similarity=0.302 Sum_probs=70.1
Q ss_pred HHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchH
Q 028370 75 PLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEW 154 (210)
Q Consensus 75 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~ 154 (210)
-||..++.|+.+..--|+..|+++|...... |.||||.|+..|+..-+++|+-+|+++ ...|.+|.||+.+|.+.++
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpek-g~TpLHvAAk~Gq~~Q~ElL~vYGAD~--~a~d~~GmtP~~~AR~~gH 212 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEK-GNTPLHVAAKAGQILQAELLAVYGADP--GAQDSSGMTPVDYARQGGH 212 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCccc-CCchhHHHHhccchhhhhHHhhccCCC--CCCCCCCCcHHHHHHhcCc
Confidence 4899999999998888889999999998776 999999999999999999999999966 8999999999999986553
No 100
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.70 E-value=1.7e-08 Score=81.66 Aligned_cols=96 Identities=24% Similarity=0.349 Sum_probs=83.3
Q ss_pred CCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccc
Q 028370 69 KSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHY 148 (210)
Q Consensus 69 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~ 148 (210)
..++...+++|++.|....++-+.-.|.|+...+.| .+|+||.|+..|+.+++++|++... +++..+|.+|.|||+=
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD--~RTaLHvAAaEG~v~v~kfl~~~~k-v~~~~kDRw~rtPlDd 579 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYD--DRTALHVAAAEGHVEVVKFLLNACK-VDPDPKDRWGRTPLDD 579 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhcccccccccc--cchhheeecccCceeHHHHHHHHHc-CCCChhhccCCCcchH
Confidence 344567899999999999999888889999988888 8999999999999999999999865 5779999999999999
Q ss_pred cccchHHHHHHHHHhhhhhhc
Q 028370 149 CPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 149 a~~~~~~~~~~~~~l~~~~~~ 169 (210)
|... +..+++++|.+....
T Consensus 580 A~~F--~h~~v~k~L~~~~~~ 598 (622)
T KOG0506|consen 580 AKHF--KHKEVVKLLEEAQYP 598 (622)
T ss_pred hHhc--CcHHHHHHHHHHhcc
Confidence 9844 458899998887653
No 101
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.65 E-value=9.9e-08 Score=78.26 Aligned_cols=87 Identities=31% Similarity=0.555 Sum_probs=59.6
Q ss_pred hHHHHHHHcCCHHHHHHHHHCC--CCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHH
Q 028370 37 TPLHIGARKGDIKLVKQLLDEG--MDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTA 114 (210)
Q Consensus 37 t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A 114 (210)
.|+|+++...+.+-....+... ..++.. |..|.||||.|+..|+...++.|+..|+++..++.. |++|||-|
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~----D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~--gWs~L~EA 95 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRR----DPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNE--GWSPLHEA 95 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccc----cCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccc--cccHHHHH
Confidence 3477777776665555544332 233334 667778888888888887777787777777777666 77888888
Q ss_pred HhcCCHHHHHHHHHc
Q 028370 115 AKERKKEAVRFLIEN 129 (210)
Q Consensus 115 ~~~g~~~~v~~Ll~~ 129 (210)
+..|+.+++..++.+
T Consensus 96 v~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 96 VSTGNEQIITEVLRH 110 (560)
T ss_pred HHcCCHHHHHHHHHH
Confidence 877777777666654
No 102
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.60 E-value=9.5e-08 Score=79.11 Aligned_cols=100 Identities=25% Similarity=0.326 Sum_probs=87.7
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
-++..++.+..|.||+|+..|+-++|++++++|+.-... -.+..|.|+||.|+..++..+..+|++.|+++...+..
T Consensus 890 g~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld--~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~k- 966 (1004)
T KOG0782|consen 890 GSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLD--MADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSK- 966 (1004)
T ss_pred CceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHH--HHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccC-
Confidence 456778999999999999999999999999999743211 11788999999999999999999999999999888777
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHc
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIEN 129 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~ 129 (210)
|.||-.-|-+.|+.+.+-+|-.+
T Consensus 967 -g~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 967 -GKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred -CCChHHHHHhcCCchHHHHHhhh
Confidence 99999999999999999998764
No 103
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.58 E-value=2e-07 Score=80.45 Aligned_cols=119 Identities=24% Similarity=0.260 Sum_probs=96.9
Q ss_pred hhhhhccchhHHHHHHhhHHHh--hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHH
Q 028370 4 SMVHEQLGPFTLQRKASRKRFF--RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQ 81 (210)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~ 81 (210)
+++..+.|..+.+++.+.+.-. -++|..|.-|+++|+.|+.+.+.++.++|+++.... . .+|..|+.
T Consensus 29 fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--g---------dALL~aI~ 97 (822)
T KOG3609|consen 29 FLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--G---------DALLLAIA 97 (822)
T ss_pred HHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--c---------hHHHHHHH
Confidence 4566788999999998887766 567789999999999999999999999999886543 2 48899999
Q ss_pred CCcHHHHHHHHHcCCCCCc--------ccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCC
Q 028370 82 GGHLEVMDVLLERGADIDA--------RTKGACGWTPLHTAAKERKKEAVRFLIENGAFL 133 (210)
Q Consensus 82 ~~~~~~v~~Ll~~g~~~~~--------~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 133 (210)
.|...+|+.++.+-..... ......+-||+.+|+..++.||+++|+.+|+.+
T Consensus 98 ~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i 157 (822)
T KOG3609|consen 98 VGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCI 157 (822)
T ss_pred HHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCC
Confidence 9999999999986332210 011122679999999999999999999999976
No 104
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.51 E-value=3.6e-07 Score=75.05 Aligned_cols=67 Identities=30% Similarity=0.529 Sum_probs=60.9
Q ss_pred HhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHc
Q 028370 24 FFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLER 94 (210)
Q Consensus 24 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 94 (210)
....+...|..|.||||.|+..|+.+.++.|+..|+++... |..|++|||.|+..|+.+++..++.+
T Consensus 44 ~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~k----N~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 44 VSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIK----NNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred hhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCcccc----ccccccHHHHHHHcCCHHHHHHHHHH
Confidence 45567889999999999999999999999999999999988 99999999999999999888777654
No 105
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.47 E-value=5.7e-07 Score=71.21 Aligned_cols=75 Identities=33% Similarity=0.453 Sum_probs=62.6
Q ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHH
Q 028370 36 WTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAA 115 (210)
Q Consensus 36 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~ 115 (210)
.--|+.||+.|+.+.++.|++.|.++|.. |....+||.+|+..||..+|++|+++|+-.+..+.+ |.. .|+++
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~v----D~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~--G~R-C~Yga 109 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAV----DRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFD--GDR-CHYGA 109 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchh----hcccccHHHHHHHcCcHHHHHHHHHcCCcccccccC--cch-hhhhh
Confidence 45689999999999999999999999998 899999999999999999999999999866544433 543 34444
Q ss_pred hc
Q 028370 116 KE 117 (210)
Q Consensus 116 ~~ 117 (210)
-+
T Consensus 110 Ln 111 (516)
T KOG0511|consen 110 LN 111 (516)
T ss_pred hh
Confidence 43
No 106
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.47 E-value=1e-06 Score=63.47 Aligned_cols=83 Identities=23% Similarity=0.321 Sum_probs=69.2
Q ss_pred hhcccCCCCChHHHHHHHcCCHHHHHHHHHCC-CCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEG-MDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
+++.+|..|+|+++.|+..|+.+.+.+|+.+| +.+.+. |..+.+++.+|-+.|...++..|.++..+-.-.+...
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~----d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~nss 79 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVT----DESSLDAAQLAEKGGAQAFVHSLFENDRETSHPMNSS 79 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCccccccc----ccccchHHHHHHhcChHHHHHHHHHHhccCCCcccCC
Confidence 57889999999999999999999999999999 888888 8999999999999999999999998755444333333
Q ss_pred CCChHHHH
Q 028370 106 CGWTPLHT 113 (210)
Q Consensus 106 ~g~tpL~~ 113 (210)
.++++..+
T Consensus 80 ~~e~lfyC 87 (223)
T KOG2384|consen 80 RDEALFYC 87 (223)
T ss_pred CCCccchh
Confidence 35555554
No 107
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.43 E-value=3.2e-07 Score=80.64 Aligned_cols=80 Identities=29% Similarity=0.425 Sum_probs=59.8
Q ss_pred CCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCccccc
Q 028370 70 SKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYC 149 (210)
Q Consensus 70 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a 149 (210)
..|.|+||.|+..+...++++|+++|++++..+.. |.||+|.+...|+...+..|+++|+ .....+.+|.+|+++|
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~--g~~plh~~~~~g~~~~~~~ll~~~a--~~~a~~~~~~~~l~~a 729 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSK--GRTPLHHATASGHTSIACLLLKRGA--DPNAFDPDGKLPLDIA 729 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhcc--CCCcchhhhhhcccchhhhhccccc--cccccCccCcchhhHH
Confidence 34667778887777777777788887777777766 7788888877777777777777777 3477777777787777
Q ss_pred ccch
Q 028370 150 PSLE 153 (210)
Q Consensus 150 ~~~~ 153 (210)
....
T Consensus 730 ~~~~ 733 (785)
T KOG0521|consen 730 MEAA 733 (785)
T ss_pred hhhc
Confidence 6543
No 108
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.39 E-value=3.8e-06 Score=66.68 Aligned_cols=73 Identities=25% Similarity=0.347 Sum_probs=61.3
Q ss_pred CcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 028370 73 VTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCP 150 (210)
Q Consensus 73 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~ 150 (210)
.--|..||+.|..+.|+.|++.|.++|..++. ..+||.+|+-.||.++|++|+++|+-- ......|... ||++
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~f--D~spL~lAsLcGHe~vvklLLenGAiC--~rdtf~G~RC-~Yga 109 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRF--DSSPLYLASLCGHEDVVKLLLENGAIC--SRDTFDGDRC-HYGA 109 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcc--cccHHHHHHHcCcHHHHHHHHHcCCcc--cccccCcchh-hhhh
Confidence 34688999999999999999999999999887 889999999999999999999999943 4444556544 4444
No 109
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.35 E-value=1.4e-06 Score=72.35 Aligned_cols=67 Identities=37% Similarity=0.536 Sum_probs=61.9
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCc
Q 028370 30 DTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDA 100 (210)
Q Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 100 (210)
..+.+|+|+||+||+.|++.+.++|+=+|+|+..+ |..|+|+|.||-..|.-+|+..|+++|+..+.
T Consensus 656 ~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~r----da~g~t~l~yar~a~sqec~d~llq~gcp~e~ 722 (749)
T KOG0705|consen 656 CGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMAR----DAHGRTALFYARQAGSQECIDVLLQYGCPDEC 722 (749)
T ss_pred ccCCCCcchhhhhhhhcchhHHHHHHHhCccceec----ccCCchhhhhHhhcccHHHHHHHHHcCCCccc
Confidence 35668899999999999999999999999999988 99999999999999999999999999987653
No 110
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.20 E-value=1.2e-06 Score=77.10 Aligned_cols=99 Identities=35% Similarity=0.433 Sum_probs=85.3
Q ss_pred HHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCccc
Q 028370 23 RFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDART 102 (210)
Q Consensus 23 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 102 (210)
+...++..+-..|.|+||.|+..|...++++|+++|++++.. +..|.+|+|.+...|+...+..++.+|++.+..+
T Consensus 644 ~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~----d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~ 719 (785)
T KOG0521|consen 644 GCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNAL----DSKGRTPLHHATASGHTSIACLLLKRGADPNAFD 719 (785)
T ss_pred hhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhh----hccCCCcchhhhhhcccchhhhhccccccccccC
Confidence 333344445556899999999999999999999999999998 9999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHhcCCHHHHHHHH
Q 028370 103 KGACGWTPLHTAAKERKKEAVRFLI 127 (210)
Q Consensus 103 ~~~~g~tpL~~A~~~g~~~~v~~Ll 127 (210)
.+ |.+|+++|....+.+++-++.
T Consensus 720 ~~--~~~~l~~a~~~~~~d~~~l~~ 742 (785)
T KOG0521|consen 720 PD--GKLPLDIAMEAANADIVLLLR 742 (785)
T ss_pred cc--CcchhhHHhhhccccHHHHHh
Confidence 88 999999998776655554443
No 111
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.20 E-value=9.2e-06 Score=58.66 Aligned_cols=69 Identities=28% Similarity=0.259 Sum_probs=61.5
Q ss_pred CCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcC-CCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCC
Q 028370 58 GMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERG-ADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAF 132 (210)
Q Consensus 58 g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 132 (210)
+.++|.+ |..|+|+++.|+..|+.+.+.+|+..| +.+...+.. |.+++.+|-..|..++++.|-+.-.+
T Consensus 2 e~~in~r----D~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~s--sldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 2 EGNINAR----DAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDES--SLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CCCccch----hhhcchHHHHHhhhcchhHHHHHhccCcccccccccc--cchHHHHHHhcChHHHHHHHHHHhcc
Confidence 3567777 999999999999999999999999999 788877776 99999999999999999999987553
No 112
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.11 E-value=4.3e-06 Score=73.90 Aligned_cols=130 Identities=22% Similarity=0.209 Sum_probs=94.2
Q ss_pred hcccCCCCChHHHHHHHcCCHHHHHHHHHC-CCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHH-HcCCCCCcccCCC
Q 028370 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDE-GMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLL-ERGADIDARTKGA 105 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~~ 105 (210)
.....-.|++.+|+++..+..-.++.+++- |...... +.+|...+|. |..++.+.+-+++ -.|..++..+..
T Consensus 567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~el----d~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~- 640 (975)
T KOG0520|consen 567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLEL----DRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRN- 640 (975)
T ss_pred cccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhh----cccCCChhhH-hhhcCCceeEEEEeecccccccccCC-
Confidence 334556799999999999999888888875 5444444 6777788888 5555555554444 367888888888
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCC----CCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAF----LPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~----~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|+||||+|+..|+..++..|++.|++ .++....-.|.|+-..|.. ++...+..+|.+.
T Consensus 641 -G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s--~g~~gia~~lse~ 702 (975)
T KOG0520|consen 641 -GWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARA--NGHKGIAGYLSEK 702 (975)
T ss_pred -CCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhc--ccccchHHHHhhh
Confidence 99999999999999999999988763 2233444556777777763 3446666666654
No 113
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.45 E-value=0.00045 Score=60.34 Aligned_cols=123 Identities=20% Similarity=0.234 Sum_probs=94.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCC----CccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCC
Q 028370 32 DDRGWTPLHIGARKGDIKLVKQLLDEGM----DVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACG 107 (210)
Q Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~----~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g 107 (210)
...+--....|+.+|+...|+..++... ++|+. |.-|+++++.|+...+.++.++|++.+... |
T Consensus 22 l~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~----d~lGr~al~iai~nenle~~eLLl~~~~~~--------g 89 (822)
T KOG3609|consen 22 LNEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCR----DPLGRLALHIAIDNENLELQELLLDTSSEE--------G 89 (822)
T ss_pred cchhhHHHHHHHHcCChHHHHHHHHhccccccchhcc----ChHhhhceecccccccHHHHHHHhcCcccc--------c
Confidence 3345556778999999999999997643 45555 889999999999999999999999986543 2
Q ss_pred ChHHHHHHhcCCHHHHHHHHHcCCCCC--------CCCCCCCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 108 WTPLHTAAKERKKEAVRFLIENGAFLP--------DDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 108 ~tpL~~A~~~g~~~~v~~Ll~~g~~~~--------~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
.+|-+|+..|..++|++++.+..... ....-.-+-||+-.|+ ..+..||++.|......
T Consensus 90 -dALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAA--h~NnyEil~~Ll~kg~~ 156 (822)
T KOG3609|consen 90 -DALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAA--HLNNFEILQCLLTRGHC 156 (822)
T ss_pred -hHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHH--HhcchHHHHHHHHcCCC
Confidence 48999999999999999999865321 0122233469999998 55568999998876443
No 114
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.39 E-value=0.00018 Score=63.97 Aligned_cols=96 Identities=25% Similarity=0.332 Sum_probs=72.8
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHH-HCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcc----cC
Q 028370 29 IDTDDRGWTPLHIGARKGDIKLVKQLL-DEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDAR----TK 103 (210)
Q Consensus 29 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----~~ 103 (210)
...|.+|.-.+|.+ ..+.++.+.+++ -.|..++.+ |..|+||||||+..|+..++..|++.|++.... ..
T Consensus 602 ~eld~d~qgV~hfc-a~lg~ewA~ll~~~~~~ai~i~----D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~ 676 (975)
T KOG0520|consen 602 LELDRDGQGVIHFC-AALGYEWAFLPISADGVAIDIR----DRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPE 676 (975)
T ss_pred hhhcccCCChhhHh-hhcCCceeEEEEeecccccccc----cCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCC
Confidence 45777888888884 445555555554 466777777 999999999999999999999999876644322 11
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHc
Q 028370 104 GACGWTPLHTAAKERKKEAVRFLIEN 129 (210)
Q Consensus 104 ~~~g~tpL~~A~~~g~~~~v~~Ll~~ 129 (210)
...|.|+-..|...|+..+..+|-+.
T Consensus 677 ~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 677 TPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred CCCCCchhhhhhcccccchHHHHhhh
Confidence 22388999999999998888887765
No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.35 E-value=0.00045 Score=33.37 Aligned_cols=27 Identities=52% Similarity=0.977 Sum_probs=16.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCc
Q 028370 35 GWTPLHIGARKGDIKLVKQLLDEGMDV 61 (210)
Q Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 61 (210)
|.||+|+|+..++.++++.|++.+.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 456666666666666666666655543
No 116
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.34 E-value=0.001 Score=54.92 Aligned_cols=64 Identities=19% Similarity=0.229 Sum_probs=38.7
Q ss_pred HHHHHHHHHcCCCCCccc----CCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 028370 85 LEVMDVLLERGADIDART----KGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCP 150 (210)
Q Consensus 85 ~~~v~~Ll~~g~~~~~~~----~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~ 150 (210)
...+++|.+++.+.|..- .+..-.|+||+|+.+|..++|.+|++.|+ ++..+|..|.||..++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~--Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGC--DPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcC--CchhcccCCCCcccccc
Confidence 345566666655543221 11123467777777777777777777776 44777777777777665
No 117
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.14 E-value=0.0011 Score=31.82 Aligned_cols=26 Identities=46% Similarity=0.705 Sum_probs=17.6
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCC
Q 028370 107 GWTPLHTAAKERKKEAVRFLIENGAF 132 (210)
Q Consensus 107 g~tpL~~A~~~g~~~~v~~Ll~~g~~ 132 (210)
|.||+|+|+..++.++++.|++.+.+
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 55677777777777777777766653
No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.95 E-value=0.0014 Score=54.10 Aligned_cols=67 Identities=24% Similarity=0.267 Sum_probs=54.0
Q ss_pred CHHHHHHHHHCCCCccccccC--CCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHH
Q 028370 47 DIKLVKQLLDEGMDVNVAAWG--PKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAA 115 (210)
Q Consensus 47 ~~~~v~~Ll~~g~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~ 115 (210)
-...++.|.+++.+.|...-. .+....|+||+|+.+|...+|.+|++.|||+.+.+.. |.||..++.
T Consensus 403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~--Grtpy~ls~ 471 (591)
T KOG2505|consen 403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGA--GRTPYSLSA 471 (591)
T ss_pred chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccC--CCCcccccc
Confidence 367788888888776543211 1333569999999999999999999999999999888 999999877
No 119
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=94.68 E-value=0.26 Score=37.24 Aligned_cols=92 Identities=22% Similarity=0.330 Sum_probs=63.0
Q ss_pred ChHHHHHHHcCCHHHHHHHHHCC----CCccccccCCCCCCCcHHHHHHH--CCcHHHHHHHHHcC-CCCCccc-CCCCC
Q 028370 36 WTPLHIGARKGDIKLVKQLLDEG----MDVNVAAWGPKSKGVTPLHLAAQ--GGHLEVMDVLLERG-ADIDART-KGACG 107 (210)
Q Consensus 36 ~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~~~~~~~~g~t~L~~A~~--~~~~~~v~~Ll~~g-~~~~~~~-~~~~g 107 (210)
.+++.+|+.++..+++.+|+++- .++... ..+.--+-++.. ..+..++++++.+| ++++..- .-..|
T Consensus 180 ~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~-----~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSG 254 (284)
T PF06128_consen 180 HQAMWLSIGNAKEDVALYLLSKFNFTKQDVASM-----EKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSG 254 (284)
T ss_pred HHHHHHHhcccHHHHHHHHHhhcceecchhhhc-----CcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCc
Confidence 46788888888889999998763 122111 112223444433 45677889999886 3454321 11239
Q ss_pred ChHHHHHHhcCCHHHHHHHHHcCCC
Q 028370 108 WTPLHTAAKERKKEAVRFLIENGAF 132 (210)
Q Consensus 108 ~tpL~~A~~~g~~~~v~~Ll~~g~~ 132 (210)
.|-|.-|..+++.+++.+|+++|+.
T Consensus 255 dtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 255 DTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred chHHHhHHhcCcHHHHHHHHHcCcc
Confidence 9999999999999999999999993
No 120
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=92.60 E-value=0.32 Score=30.13 Aligned_cols=47 Identities=19% Similarity=0.282 Sum_probs=35.7
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHc
Q 028370 37 TPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLER 94 (210)
Q Consensus 37 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 94 (210)
..+..|+..|+.|+++.+++.+ .++ ...+..|+...+.+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~~----------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KPD----------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-ccH----------HHHHHHHHHHhhHHHHHHHHHh
Confidence 4567888888888888888665 222 1368888888888888888875
No 121
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=91.36 E-value=0.53 Score=35.61 Aligned_cols=52 Identities=27% Similarity=0.299 Sum_probs=42.8
Q ss_pred CCHHHHHHHHHCC-CCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCC
Q 028370 46 GDIKLVKQLLDEG-MDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADI 98 (210)
Q Consensus 46 g~~~~v~~Ll~~g-~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 98 (210)
.+..+++..+++| +++|.... .-..|.|-|..|+..++.+++.+|+.+|+-.
T Consensus 228 a~~kvL~~Fi~~Glv~vN~~F~-~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 228 ASYKVLEYFINRGLVDVNKKFQ-KVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred CcHHHHHHHHhccccccchhhh-ccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 4678889999998 67775432 2567999999999999999999999999843
No 122
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=91.19 E-value=0.61 Score=28.88 Aligned_cols=47 Identities=30% Similarity=0.459 Sum_probs=38.9
Q ss_pred cHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHc
Q 028370 74 TPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIEN 129 (210)
Q Consensus 74 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 129 (210)
..+..|+..|+.++++.+++.+ .+ ....+..|+...+-+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~--------~~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KP--------DNDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-cc--------HHHHHHHHHHHhhHHHHHHHHHh
Confidence 5788999999999999998764 22 13579999999999999999886
No 123
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=89.86 E-value=1.8 Score=31.65 Aligned_cols=111 Identities=12% Similarity=0.038 Sum_probs=55.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHH----HHHHHcCCCCCcccCCCCCCh
Q 028370 34 RGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVM----DVLLERGADIDARTKGACGWT 109 (210)
Q Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v----~~Ll~~g~~~~~~~~~~~g~t 109 (210)
.+++.+-.||+..+.++|+|+-+.=.- .+-.+.+..|....+.++. .+++.+..+-...+...--..
T Consensus 75 ~~q~LFElAC~~qkydiV~WI~qnL~i---------~~~~~iFdIA~~~kDlsLyslGY~l~~~~~~~~~~~d~~~ll~~ 145 (192)
T PF03158_consen 75 LNQELFELACEEQKYDIVKWIGQNLHI---------YNPEDIFDIAFAKKDLSLYSLGYKLLFNRMMSEHNEDPTSLLTQ 145 (192)
T ss_pred HHHHHHHHHHHHccccHHHHHhhccCC---------CCchhhhhhhhhccchhHHHHHHHHHHhhcccccccCHHHHHHH
Confidence 445566667777777777776332111 1222455666666555432 122222211111111100112
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHh
Q 028370 110 PLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQ 163 (210)
Q Consensus 110 pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l 163 (210)
-|..|+..|.+..+--.+++|.++ + .++|..|+. .+...|+.++
T Consensus 146 hl~~a~~kgll~F~letlkygg~~--~------~~vls~Av~--ynhRkIL~yf 189 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNV--D------IIVLSQAVK--YNHRKILDYF 189 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcc--c------HHHHHHHHH--hhHHHHHHHh
Confidence 356677788887777777777754 2 256666763 3345555443
No 124
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=80.15 E-value=4.7 Score=29.57 Aligned_cols=46 Identities=26% Similarity=0.340 Sum_probs=35.3
Q ss_pred HHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHH
Q 028370 75 PLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIE 128 (210)
Q Consensus 75 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 128 (210)
-|.+|+..|-...+-..+.+|.+++.. .|..|+...+..++.+++.
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~~--------vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDII--------VLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccHH--------HHHHHHHhhHHHHHHHhhc
Confidence 467888888888887788888887753 5777888888888877764
No 125
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=34.46 E-value=41 Score=25.71 Aligned_cols=37 Identities=14% Similarity=0.143 Sum_probs=28.7
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCcc
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVN 62 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 62 (210)
.-.|..|....|+=..|.+.++....+.|++.|+.-.
T Consensus 6 a~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~Se 42 (271)
T KOG1709|consen 6 AGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVPSE 42 (271)
T ss_pred CCccccChhhCCchHHHHHccHHHHHHHHHHcCCchh
Confidence 3456677778888888888888888888888887544
No 126
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=29.15 E-value=56 Score=24.55 Aligned_cols=49 Identities=24% Similarity=0.208 Sum_probs=30.6
Q ss_pred CCCCCcHHHHHHHCCcHHHH-HHHHHcCCCCC--cccCCCCCChHHHHHHhc
Q 028370 69 KSKGVTPLHLAAQGGHLEVM-DVLLERGADID--ARTKGACGWTPLHTAAKE 117 (210)
Q Consensus 69 ~~~g~t~L~~A~~~~~~~~v-~~Ll~~g~~~~--~~~~~~~g~tpL~~A~~~ 117 (210)
+.....|||-|+.-+..+++ -+++++.+.+- ..+.+..|..+|.+|...
T Consensus 219 d~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~ 270 (280)
T KOG4591|consen 219 DGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR 270 (280)
T ss_pred cCCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence 33444689999888887765 35566544322 233444588888887543
No 127
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=26.14 E-value=63 Score=24.76 Aligned_cols=39 Identities=23% Similarity=0.221 Sum_probs=27.0
Q ss_pred HHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCC
Q 028370 55 LDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGAD 97 (210)
Q Consensus 55 l~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 97 (210)
++.|+.-|.. |....|+-.+|...++..+.+.|++.|+.
T Consensus 2 le~ga~wn~i----d~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 2 LEYGAGWNFI----DYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred cccCCCcccc----ChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 4556666655 66777777777777777777777776653
No 128
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=25.52 E-value=48 Score=28.69 Aligned_cols=116 Identities=13% Similarity=0.050 Sum_probs=60.8
Q ss_pred hcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHH----------CCcHHH-HHHHHHcCC
Q 028370 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQ----------GGHLEV-MDVLLERGA 96 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~----------~~~~~~-v~~Ll~~g~ 96 (210)
++.....+.++.+.....|+...++.....+.. . -..+..+++.|.. .+..++ +.+..+...
T Consensus 48 i~~~~s~~~~~~~l~~~~g~~~~~~~a~~fDv~--~-----~g~~~~gl~~aml~a~~~~~~P~~~a~~~~~~~~~~~~~ 120 (503)
T KOG0513|consen 48 INQGVSLAYLELRLQNIDGDPSAARLADYFDVS--I-----AGTNTGGLITAMLFAPNDCGRPRFGATDILWKFNLEKAP 120 (503)
T ss_pred hhhhhhhcccHHHHHhccCChHhhHhhhccCce--e-----eccCCchhhhhhhhccccccCccccccchhhhhhhcCCC
Confidence 445666677788888888888766666555441 0 0111122222221 112222 333333322
Q ss_pred CCCcccC-----CCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccc
Q 028370 97 DIDARTK-----GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSL 152 (210)
Q Consensus 97 ~~~~~~~-----~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~ 152 (210)
.+-.+.. .....++++..+.....+++..++..+. ....+...|.|+|+.+...
T Consensus 121 ~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~--~~~~~~~~g~t~L~~tl~~ 179 (503)
T KOG0513|consen 121 KLLEKFDDPNFIKGDLNLALRILVSGDKYSGAEVLLTKYE--IADAREVLGNTKLHLTLTK 179 (503)
T ss_pred ccccccccccccccccccceeeeecCccccceeecccccc--cchhhhhcCCceeeeeccC
Confidence 2221111 1115577777777777777777776544 2355666778888877644
No 129
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=23.54 E-value=19 Score=31.40 Aligned_cols=26 Identities=42% Similarity=0.764 Sum_probs=12.1
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHH
Q 028370 31 TDDRGWTPLHIGARKGDIKLVKQLLD 56 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~ 56 (210)
+|..|.+|+|.++..|+.++.+.++.
T Consensus 425 ~d~f~~~p~~~~~~sgdp~~~~~~~~ 450 (605)
T KOG3836|consen 425 DDKFGFTPLHIPQISGDPRIIQLLLN 450 (605)
T ss_pred hcccccccccccCCCCCHHHhhhhhh
Confidence 44444444444444444444444443
No 130
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=23.10 E-value=10 Score=32.46 Aligned_cols=90 Identities=13% Similarity=-0.025 Sum_probs=56.9
Q ss_pred CCcHHHHHHHCCcHHHHHHHHHcCC-CCCcccCCCCCChHHHHHHh---cCCHHHHHHHHHcCCCCCCCCCCCCCCCcc-
Q 028370 72 GVTPLHLAAQGGHLEVMDVLLERGA-DIDARTKGACGWTPLHTAAK---ERKKEAVRFLIENGAFLPDDINDSRFNPPL- 146 (210)
Q Consensus 72 g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~~~g~tpL~~A~~---~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l- 146 (210)
.+|++++|...|.++.+.+++..+. +++-...+ |.. |.+.. .|..+.+..|...++.. .++|..|+-+-
T Consensus 58 qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~--~~~--~C~~~g~s~~~~e~~~hL~~~k~~~--~~tda~g~~~~~ 131 (528)
T KOG1595|consen 58 QRRRRPVARRDGSFNYSPDIYCTKYDEVTGICPD--GDE--HCAVLGRSVGDTERTYHLRYYKTLP--CVTDARGNCVKN 131 (528)
T ss_pred cccccchhhhcCccccccceeecchhhccccCCC--Ccc--cchhcccccCCcceeEecccccccc--CccccCCCcccC
Confidence 4689999999999999988886543 34433334 555 55443 35678888888888743 66787887554
Q ss_pred --cccccc-hHHHHHHHHHhhhhh
Q 028370 147 --HYCPSL-EWAYEEMMRFQRESF 167 (210)
Q Consensus 147 --~~a~~~-~~~~~~~~~~l~~~~ 167 (210)
|.|... -......++.+++..
T Consensus 132 v~~~~~~~~~~~~r~~~~~l~e~~ 155 (528)
T KOG1595|consen 132 VLHCAFAHGPNDLRPPVEDLLELQ 155 (528)
T ss_pred cccccccCCccccccHHHHHHhcc
Confidence 433321 122345555566554
No 131
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=20.21 E-value=3.3e+02 Score=23.25 Aligned_cols=78 Identities=13% Similarity=0.093 Sum_probs=49.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHH
Q 028370 35 GWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTA 114 (210)
Q Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A 114 (210)
-.+-+-.|.+.|+++.+..+...-.+.... ...-..|...|+.++++.-..+..+. ...+.+.
T Consensus 321 ~~~rFeLAl~lg~L~~A~~~a~~~~~~~~W--------~~Lg~~AL~~g~~~lAe~c~~k~~d~---------~~L~lLy 383 (443)
T PF04053_consen 321 PDHRFELALQLGNLDIALEIAKELDDPEKW--------KQLGDEALRQGNIELAEECYQKAKDF---------SGLLLLY 383 (443)
T ss_dssp HHHHHHHHHHCT-HHHHHHHCCCCSTHHHH--------HHHHHHHHHTTBHHHHHHHHHHCT-H---------HHHHHHH
T ss_pred hHHHhHHHHhcCCHHHHHHHHHhcCcHHHH--------HHHHHHHHHcCCHHHHHHHHHhhcCc---------cccHHHH
Confidence 357788899999999988887654433322 12446777889999888877764332 2455566
Q ss_pred HhcCCHHHHHHHHHc
Q 028370 115 AKERKKEAVRFLIEN 129 (210)
Q Consensus 115 ~~~g~~~~v~~Ll~~ 129 (210)
...|+.+-++.|.+.
T Consensus 384 ~~~g~~~~L~kl~~~ 398 (443)
T PF04053_consen 384 SSTGDREKLSKLAKI 398 (443)
T ss_dssp HHCT-HHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHH
Confidence 667776666666543
Done!