Query 028370
Match_columns 210
No_of_seqs 170 out of 1928
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 17:13:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028370.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028370hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 4.8E-30 1.6E-34 186.1 14.5 149 8-168 12-160 (169)
2 3c5r_A BARD-1, BRCA1-associate 100.0 1.8E-27 6.2E-32 166.3 13.6 127 30-166 5-131 (137)
3 3f6q_A Integrin-linked protein 99.9 1.4E-26 4.8E-31 168.9 17.7 149 11-170 16-164 (179)
4 1d9s_A Cyclin-dependent kinase 99.9 1.2E-27 4E-32 167.2 10.3 130 27-166 4-133 (136)
5 3v30_A DNA-binding protein rfx 99.9 6.2E-27 2.1E-31 169.6 14.5 149 10-169 12-160 (172)
6 3twr_A Tankyrase-2; ankyrin re 99.9 2.3E-26 7.8E-31 165.5 16.6 144 11-166 19-162 (165)
7 4gpm_A Engineered protein OR26 99.9 7.3E-27 2.5E-31 169.3 13.8 122 37-168 6-127 (169)
8 3v31_A Ankyrin repeat family A 99.9 1.1E-26 3.6E-31 167.6 14.4 148 10-169 13-160 (167)
9 2y1l_E Darpin-8.4; hydrolase-i 99.9 1E-26 3.5E-31 168.2 14.2 144 11-166 25-168 (169)
10 1awc_B Protein (GA binding pro 99.9 9.3E-27 3.2E-31 165.7 12.9 140 11-163 13-152 (153)
11 2jab_A H10-2-G3; HER2, darpin, 99.9 6.1E-27 2.1E-31 163.6 10.7 126 31-166 10-135 (136)
12 3aaa_C Myotrophin, protein V-1 99.9 1.9E-26 6.6E-31 158.2 12.9 112 31-150 3-114 (123)
13 2rfm_A Putative ankyrin repeat 99.9 1.8E-26 6.1E-31 170.1 13.3 131 27-167 27-157 (192)
14 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.3E-26 4.3E-31 165.3 11.8 144 10-166 12-155 (156)
15 4b93_B Ankyrin repeat domain-c 99.9 2.1E-26 7.1E-31 178.8 13.9 116 30-153 114-229 (269)
16 2rfm_A Putative ankyrin repeat 99.9 2.7E-26 9.2E-31 169.1 11.4 132 26-167 59-190 (192)
17 1ihb_A P18-INK4C(INK6), cyclin 99.9 3.1E-26 1.1E-30 164.1 10.6 131 26-166 29-159 (162)
18 1n0r_A 4ANK, 4 ankyrin repeats 99.9 8.8E-26 3E-30 154.8 12.3 123 34-166 1-123 (126)
19 4b93_B Ankyrin repeat domain-c 99.9 3.3E-26 1.1E-30 177.6 10.5 132 26-167 77-208 (269)
20 1bi7_B P16INK4A, MTS1, multipl 99.9 2.4E-26 8.3E-31 164.1 8.6 128 29-167 6-134 (156)
21 3jxi_A Vanilloid receptor-rela 99.9 3.7E-26 1.3E-30 175.8 9.9 135 28-170 86-251 (260)
22 2rfa_A Transient receptor pote 99.9 4.5E-25 1.5E-29 166.9 14.8 142 25-168 27-182 (232)
23 2vge_A RELA-associated inhibit 99.9 3.1E-25 1.1E-29 168.3 13.7 134 28-169 14-148 (229)
24 1k1a_A B-cell lymphoma 3-encod 99.9 1E-24 3.5E-29 165.5 16.3 127 28-164 109-236 (241)
25 1yyh_A HN1;, notch 1, ankyrin 99.9 1.8E-25 6.2E-30 171.6 12.3 146 11-168 68-214 (253)
26 3aji_A 26S proteasome non-ATPa 99.9 1.4E-24 4.8E-29 164.0 17.0 133 26-168 64-196 (231)
27 2rfa_A Transient receptor pote 99.9 6.6E-25 2.3E-29 166.0 14.9 139 29-171 69-224 (232)
28 3ehr_A Osteoclast-stimulating 99.9 1.2E-25 4.2E-30 169.3 10.6 129 29-167 67-196 (222)
29 4hbd_A KN motif and ankyrin re 99.9 3.7E-25 1.3E-29 172.3 12.8 141 15-165 91-237 (276)
30 2f8y_A Notch homolog 1, transl 99.9 1E-24 3.4E-29 163.9 14.8 147 10-168 35-182 (223)
31 3t8k_A Uncharacterized protein 99.9 3.7E-26 1.3E-30 168.1 6.1 133 26-168 28-178 (186)
32 1ikn_D Protein (I-kappa-B-alph 99.9 1.9E-24 6.4E-29 164.1 15.6 152 10-167 46-207 (236)
33 2pnn_A Transient receptor pote 99.9 3.5E-25 1.2E-29 171.7 11.3 132 31-170 97-259 (273)
34 2dzn_A Probable 26S proteasome 99.9 8.5E-25 2.9E-29 164.8 13.1 146 11-167 13-163 (228)
35 3v31_A Ankyrin repeat family A 99.9 7.9E-25 2.7E-29 157.7 12.3 124 34-167 2-125 (167)
36 3aji_A 26S proteasome non-ATPa 99.9 3.9E-24 1.3E-28 161.5 16.3 147 11-168 17-163 (231)
37 2xai_A ASB-9, ankyrin repeat a 99.9 3.7E-24 1.3E-28 165.1 16.4 132 26-168 27-158 (261)
38 2f8y_A Notch homolog 1, transl 99.9 3.1E-24 1.1E-28 161.3 15.4 125 32-166 22-147 (223)
39 3deo_A Signal recognition part 99.9 4.9E-25 1.7E-29 161.4 10.3 113 31-152 40-153 (183)
40 1oy3_D Transcription factor in 99.9 1.3E-24 4.4E-29 168.5 13.2 129 28-166 38-214 (282)
41 2dzn_A Probable 26S proteasome 99.9 2.6E-24 9E-29 162.1 14.4 150 10-169 46-199 (228)
42 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.1E-25 1.4E-29 168.5 9.9 130 32-169 34-164 (239)
43 2etb_A Transient receptor pote 99.9 4.7E-25 1.6E-29 169.4 10.3 131 31-169 86-246 (256)
44 1s70_B 130 kDa myosin-binding 99.9 2.1E-24 7.2E-29 169.0 14.2 147 11-167 51-255 (299)
45 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.4E-24 4.7E-29 156.9 12.0 128 31-168 10-137 (169)
46 1yyh_A HN1;, notch 1, ankyrin 99.9 2.6E-24 8.9E-29 165.2 14.1 128 30-167 52-180 (253)
47 3kea_A K1L; tropism, ANK repea 99.9 8.7E-25 3E-29 170.9 11.1 132 27-170 23-155 (285)
48 3hra_A Ankyrin repeat family p 99.9 2.6E-24 8.7E-29 159.2 12.7 148 11-167 16-168 (201)
49 3b7b_A Euchromatic histone-lys 99.9 7.1E-24 2.4E-28 160.7 15.4 131 27-167 69-200 (237)
50 3ljn_A Hypothetical protein; a 99.9 1.1E-24 3.6E-29 175.5 11.5 126 31-166 134-266 (364)
51 3ui2_A Signal recognition part 99.9 7.9E-25 2.7E-29 167.5 10.1 127 31-166 41-182 (244)
52 3hra_A Ankyrin repeat family p 99.9 5.5E-24 1.9E-28 157.5 14.3 145 11-165 41-199 (201)
53 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.3E-24 4.3E-29 155.7 10.3 125 34-169 4-128 (162)
54 1n0q_A 3ANK, 3 ankyrin repeats 99.9 4.9E-24 1.7E-28 139.1 12.2 93 34-132 1-93 (93)
55 3d9h_A CDNA FLJ77766, highly s 99.9 9.1E-24 3.1E-28 165.0 15.6 129 27-166 84-212 (285)
56 1oy3_D Transcription factor in 99.9 4.9E-24 1.7E-28 165.3 13.6 119 26-152 149-268 (282)
57 4hbd_A KN motif and ankyrin re 99.9 2.1E-24 7.3E-29 167.9 11.4 131 27-167 137-273 (276)
58 2etb_A Transient receptor pote 99.9 1E-24 3.5E-29 167.5 9.5 140 26-167 30-204 (256)
59 1awc_B Protein (GA binding pro 99.9 4.7E-24 1.6E-28 151.6 11.6 122 35-167 2-123 (153)
60 1ikn_D Protein (I-kappa-B-alph 99.9 1.7E-24 5.7E-29 164.4 9.8 131 27-167 37-174 (236)
61 1k1a_A B-cell lymphoma 3-encod 99.9 2.7E-23 9.1E-28 157.7 16.1 133 25-167 36-173 (241)
62 3d9h_A CDNA FLJ77766, highly s 99.9 1.5E-23 5E-28 163.9 14.7 132 26-168 50-181 (285)
63 3b7b_A Euchromatic histone-lys 99.9 1.6E-23 5.5E-28 158.7 14.2 133 26-168 35-168 (237)
64 3twr_A Tankyrase-2; ankyrin re 99.9 4.6E-24 1.6E-28 153.4 10.3 127 31-167 4-131 (165)
65 3f6q_A Integrin-linked protein 99.9 1E-23 3.5E-28 153.7 11.9 126 33-168 3-129 (179)
66 3v30_A DNA-binding protein rfx 99.9 8.8E-24 3E-28 152.9 11.0 123 35-167 2-125 (172)
67 1n11_A Ankyrin; clathrin, BAND 99.9 1.4E-23 4.7E-28 172.8 13.4 128 29-166 41-168 (437)
68 2xai_A ASB-9, ankyrin repeat a 99.9 6.2E-23 2.1E-27 158.2 16.2 129 26-166 60-188 (261)
69 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.2E-23 4.2E-28 149.7 11.3 121 35-166 2-123 (156)
70 1n11_A Ankyrin; clathrin, BAND 99.9 2.1E-23 7.3E-28 171.7 14.1 131 27-167 237-367 (437)
71 3utm_A Tankyrase-1; tankyrase, 99.9 6.7E-23 2.3E-27 163.3 15.6 68 27-98 83-150 (351)
72 1sw6_A Regulatory protein SWI6 99.9 3E-23 1E-27 165.2 13.4 134 26-167 121-306 (327)
73 2pnn_A Transient receptor pote 99.9 8.8E-24 3E-28 163.8 9.9 135 31-167 50-216 (273)
74 2l6b_A NR1C; ankyrin, consensu 99.9 4.5E-24 1.5E-28 144.6 7.3 109 30-146 4-112 (115)
75 1s70_B 130 kDa myosin-binding 99.9 5E-23 1.7E-27 161.2 13.6 125 32-166 37-161 (299)
76 3ljn_A Hypothetical protein; a 99.9 3.7E-23 1.3E-27 166.5 13.2 138 26-167 44-234 (364)
77 1wdy_A 2-5A-dependent ribonucl 99.9 7.6E-23 2.6E-27 158.4 14.4 130 27-166 30-170 (285)
78 1wdy_A 2-5A-dependent ribonucl 99.9 1.2E-22 4E-27 157.4 14.8 126 32-167 145-276 (285)
79 2fo1_E LIN-12 protein; beta-ba 99.9 4.3E-23 1.5E-27 167.0 12.7 132 28-165 228-367 (373)
80 1bi7_B P16INK4A, MTS1, multipl 99.9 1.2E-23 4.3E-28 150.0 8.2 115 26-149 36-151 (156)
81 3utm_A Tankyrase-1; tankyrase, 99.9 2.8E-22 9.4E-27 159.7 16.2 119 25-151 48-166 (351)
82 3jxi_A Vanilloid receptor-rela 99.9 2.9E-23 9.8E-28 159.6 9.4 135 32-168 43-209 (260)
83 3kea_A K1L; tropism, ANK repea 99.9 3E-23 1E-27 162.1 8.9 129 27-166 87-217 (285)
84 2fo1_E LIN-12 protein; beta-ba 99.9 8.1E-23 2.8E-27 165.4 11.5 135 25-167 156-302 (373)
85 1dcq_A PYK2-associated protein 99.9 7E-23 2.4E-27 159.6 10.4 128 35-168 130-262 (278)
86 2b0o_E UPLC1; arfgap, structur 99.9 4E-22 1.4E-26 157.0 13.9 130 34-169 150-284 (301)
87 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.8E-23 6.2E-28 159.3 6.0 127 32-169 2-128 (239)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 6.3E-22 2.2E-26 137.9 13.1 99 26-130 38-136 (136)
89 3jue_A Arfgap with coiled-coil 99.9 1.6E-22 5.3E-27 163.2 11.3 126 34-169 198-326 (368)
90 3eu9_A Huntingtin-interacting 99.9 2.5E-22 8.4E-27 151.9 11.6 127 31-167 72-200 (240)
91 2b0o_E UPLC1; arfgap, structur 99.9 2.3E-22 7.8E-27 158.4 10.9 109 31-153 186-297 (301)
92 2vge_A RELA-associated inhibit 99.9 4.6E-23 1.6E-27 156.3 6.7 127 11-147 32-161 (229)
93 1d9s_A Cyclin-dependent kinase 99.9 1.2E-22 4.2E-27 141.6 8.3 100 26-132 36-136 (136)
94 3eu9_A Huntingtin-interacting 99.9 7.2E-22 2.5E-26 149.3 11.9 150 10-169 19-168 (240)
95 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.9E-21 1.4E-25 131.4 13.9 101 26-132 26-126 (126)
96 3lvq_E ARF-GAP with SH3 domain 99.9 8.9E-22 3E-26 165.0 12.6 129 34-168 131-264 (497)
97 1dcq_A PYK2-associated protein 99.9 1.5E-21 5.2E-26 152.1 11.8 110 28-153 162-274 (278)
98 3t8k_A Uncharacterized protein 99.9 1.7E-21 5.9E-26 143.1 9.7 122 35-165 6-141 (186)
99 4g8k_A 2-5A-dependent ribonucl 99.9 3.3E-21 1.1E-25 153.5 11.3 128 30-167 163-296 (337)
100 2zgd_A 3 repeat synthetic anky 99.8 7.5E-21 2.6E-25 127.8 10.7 97 24-126 13-109 (110)
101 4g8k_A 2-5A-dependent ribonucl 99.8 4.5E-20 1.5E-24 147.0 14.8 28 35-62 59-86 (337)
102 3lvq_E ARF-GAP with SH3 domain 99.8 1.7E-20 6E-25 157.1 12.3 105 32-150 168-275 (497)
103 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.1E-20 3.6E-25 123.2 8.2 90 71-166 1-90 (93)
104 3ehr_A Osteoclast-stimulating 99.8 3E-20 1E-24 139.7 7.8 109 26-142 97-206 (222)
105 3jue_A Arfgap with coiled-coil 99.8 1.3E-19 4.5E-24 146.1 11.8 134 11-152 211-347 (368)
106 3deo_A Signal recognition part 99.8 3.4E-19 1.2E-23 130.2 11.9 115 25-166 66-181 (183)
107 3aaa_C Myotrophin, protein V-1 99.8 1.2E-19 4.3E-24 124.0 8.3 104 11-122 18-121 (123)
108 3ui2_A Signal recognition part 99.8 4.6E-19 1.6E-23 135.4 12.1 100 26-131 68-184 (244)
109 2aja_A Ankyrin repeat family p 99.8 9.4E-22 3.2E-26 159.1 -3.2 131 27-165 84-220 (376)
110 3c5r_A BARD-1, BRCA1-associate 99.8 6.4E-20 2.2E-24 127.8 5.3 101 25-131 33-133 (137)
111 2aja_A Ankyrin repeat family p 99.8 4.2E-21 1.4E-25 155.3 -2.2 139 11-167 94-248 (376)
112 2zgd_A 3 repeat synthetic anky 99.8 7.8E-19 2.7E-23 117.9 6.9 89 69-163 21-109 (110)
113 2l6b_A NR1C; ankyrin, consensu 99.8 1.3E-18 4.4E-23 117.5 6.8 92 69-166 6-97 (115)
114 1sw6_A Regulatory protein SWI6 99.8 2.5E-19 8.6E-24 142.5 3.2 122 38-167 100-228 (327)
115 1gp8_A Protein (scaffolding pr 48.7 14 0.00049 18.7 2.2 18 38-55 16-33 (40)
116 3zrh_A Ubiquitin thioesterase 38.0 1.4E+02 0.0047 24.2 7.3 53 41-93 28-90 (454)
117 4g26_A Pentatricopeptide repea 34.3 1E+02 0.0034 25.4 6.5 81 37-127 110-198 (501)
118 3zrh_A Ubiquitin thioesterase 26.4 2.1E+02 0.0072 23.2 6.6 50 80-129 30-91 (454)
119 4g26_A Pentatricopeptide repea 23.2 1.6E+02 0.0054 24.2 5.8 73 49-131 91-171 (501)
120 3spa_A Mtrpol, DNA-directed RN 22.3 68 0.0023 29.5 3.5 85 37-131 132-232 (1134)
121 3qil_A Clathrin heavy chain 1; 20.7 15 0.0005 24.2 -0.7 33 29-61 29-61 (125)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=4.8e-30 Score=186.09 Aligned_cols=149 Identities=36% Similarity=0.537 Sum_probs=132.4
Q ss_pred hccchhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHH
Q 028370 8 EQLGPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEV 87 (210)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 87 (210)
...|.+..+...... ..+++.+|..|+||||+|+..++.++++.|++.|++++.. +..|+||||+|+..|+.++
T Consensus 12 a~~G~~~~v~~Ll~~--Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~----d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 12 AENGNKDRVKDLIEN--GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAK----DSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHTTCHHH
T ss_pred HHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhh----ccCCCCHHHHHHHcCCHHH
Confidence 345666666666554 4678899999999999999999999999999999999988 9999999999999999999
Q ss_pred HHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 88 MDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 88 v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
+++|++.|++++.++.+ |+||||+|+..|+.+++++|+++|+++ +.+|..|.|||++|+.. +..+++++|.+..
T Consensus 86 v~~Ll~~gadvn~~d~~--G~TpLh~A~~~g~~~~v~~Ll~~gad~--~~~d~~G~TpL~~A~~~--g~~~iv~~Ll~~G 159 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSD--GRTPLHHAAENGHKEVVKLLISKGADV--NTSDSDGRTPLDLAREH--GNEEVVKLLEKQG 159 (169)
T ss_dssp HHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHT--TCHHHHHHHHTC-
T ss_pred HHHHHHCcCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCc--cccCCCCCCHHHHHHHc--CCHHHHHHHHHCC
Confidence 99999999999999887 999999999999999999999999965 89999999999999954 4578999888764
Q ss_pred h
Q 028370 168 S 168 (210)
Q Consensus 168 ~ 168 (210)
.
T Consensus 160 A 160 (169)
T 4gpm_A 160 G 160 (169)
T ss_dssp -
T ss_pred C
Confidence 3
No 2
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=1.8e-27 Score=166.34 Aligned_cols=127 Identities=34% Similarity=0.466 Sum_probs=114.9
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCCh
Q 028370 30 DTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWT 109 (210)
Q Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~t 109 (210)
.+|..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+++++|++.|++++..+.. |.|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~--g~t 78 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVK----DHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQ--NDS 78 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCC----CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGG--GCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcC----CCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCC--CCC
Confidence 57899999999999999999999999999999988 899999999999999999999999999999988877 999
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 110 PLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 110 pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|||+|+..|+.+++++|+++|+++ +.+|..|.||+++|+ ..+..++++++...
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~tpl~~A~--~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASR--NAVNIFGLRPVDYTD--DESMKSLLLLPEKN 131 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCGGGGCC--CHHHHHHHSCC---
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHh--hccHHHHHhhcccc
Confidence 999999999999999999999965 899999999999998 44556666655543
No 3
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=1.4e-26 Score=168.87 Aligned_cols=149 Identities=28% Similarity=0.334 Sum_probs=130.3
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDV 90 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (210)
|.+..+..... ....+++.+|..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+++++
T Consensus 16 g~~~~v~~ll~-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~ 90 (179)
T 3f6q_A 16 GNAVAVRLWLD-NTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVM----NRGDDTPLHLAASHGHRDIVQK 90 (179)
T ss_dssp TCHHHHHHHHH-CTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CTTCCCHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHh-cCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCc----CCCCCCHHHHHHHcCCHHHHHH
Confidence 44444444333 334567889999999999999999999999999999999988 8999999999999999999999
Q ss_pred HHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhcC
Q 028370 91 LLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAG 170 (210)
Q Consensus 91 Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~~ 170 (210)
|+++|++++..+.. |.||||+|+..|+.+++++|+++|+++ +.+|..|.||+++|+ ..+..++++++.+.....
T Consensus 91 Ll~~g~~~~~~d~~--g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~tpl~~A~--~~~~~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 91 LLQYKADINAVNEH--GNVPLHYACFWGQDQVAEDLVANGALV--SICNKYGEMPVDKAK--APLRELLRERAEKMGQNL 164 (179)
T ss_dssp HHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCS--SBCCTTSCCGGGGSC--HHHHHHHHHHHHHTTCCC
T ss_pred HHHcCCCCCccCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCc--chhccCCCCcHHHHH--HHHHHHHHHHHHHhhcCc
Confidence 99999999998877 999999999999999999999999965 899999999999998 456688888888765443
No 4
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=1.2e-27 Score=167.19 Aligned_cols=130 Identities=24% Similarity=0.350 Sum_probs=118.4
Q ss_pred hhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCC
Q 028370 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGAC 106 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 106 (210)
+++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|+||||+|+. ++.+++++|++.|++++..+...
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~- 77 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNAL----NRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPAT- 77 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTT-
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCc----CCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCC-
Confidence 56789999999999999999999999999999999988 8999999999999 99999999999999998876542
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 107 GWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 107 g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|.||||+|+..|+.+++++|+++|+++ +.+|..|.|||++|+.. +..+++++|.+.
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~d~~g~tpl~~A~~~--~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 78 LTRPVHDAAREGFLDTLVVLHRAGARL--DVCDAWGRLPVDLAEEQ--GHRDIARYLHAA 133 (136)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTCCCC--CCCSSSSSCHHHHHHHH--TCHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC--CccCCCCCCHHHHHHHc--CCHHHHHHHHHc
Confidence 789999999999999999999999965 89999999999999944 457888888764
No 5
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=6.2e-27 Score=169.56 Aligned_cols=149 Identities=28% Similarity=0.387 Sum_probs=130.2
Q ss_pred cchhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHH
Q 028370 10 LGPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMD 89 (210)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 89 (210)
.|.+......... ....++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.++++
T Consensus 12 ~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~ 86 (172)
T 3v30_A 12 QGELDQLKEHLRK-GDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHIL----AKERESALSLASTGGYTDIVG 86 (172)
T ss_dssp TTCHHHHHHHHTT-CSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCC----CTTCCCHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHHc-CcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhh----cccCCCHHHHHHHCCCHHHHH
Confidence 3555555554443 34447788999999999999999999999999999999988 899999999999999999999
Q ss_pred HHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 90 VLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 90 ~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
+|++.|++++..+.. |.||||+|+..|+.+++++|+++|+++ +.++..|.||+++|+.. +..+++++|.+....
T Consensus 87 ~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t~l~~A~~~--~~~~~~~~L~~~~~~ 160 (172)
T 3v30_A 87 LLLERDVDINIYDWN--GGTPLLYAVRGNHVKCVEALLARGADL--TTEADSGYTPMDLAVAL--GYRKVQQVIENHILK 160 (172)
T ss_dssp HHHTTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHH--TCHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCc--cccCCCCCCHHHHHHHh--CcHHHHHHHHHHHHH
Confidence 999999999988877 999999999999999999999999965 88999999999999944 457888888877554
No 6
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=2.3e-26 Score=165.48 Aligned_cols=144 Identities=29% Similarity=0.417 Sum_probs=124.1
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDV 90 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (210)
|.+..+...... .....+..+..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++
T Consensus 19 g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~ 93 (165)
T 3twr_A 19 GDVETVKKLCTV-QSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAK----DKGGLVPLHNACSYGHYEVAEL 93 (165)
T ss_dssp TCHHHHHHHCCT-TTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHc-CCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCcc----CCCCCCHHHHHHHcCcHHHHHH
Confidence 344444443332 23455667888999999999999999999999999999988 8999999999999999999999
Q ss_pred HHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 91 LLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 91 Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|++.|++++..+.. |.||||+|+..|+.+++++|+++|+++ +.+|..|.||+++|.. +..+++++|.+.
T Consensus 94 Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t~l~~a~~---~~~~i~~~L~~~ 162 (165)
T 3twr_A 94 LVKHGAVVNVADLW--KFTPLHEAAAKGKYEICKLLLQHGADP--TKKNRDGNTPLDLVKD---GDTDIQDLLRGD 162 (165)
T ss_dssp HHHTTCCTTCCCTT--CCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCTGGGSCT---TCHHHHHHHHTC
T ss_pred HHhCCCCCCCcCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--cccCCCCCChhHhHhc---CChHHHHHHhhc
Confidence 99999999998877 999999999999999999999999965 8999999999999875 235888888754
No 7
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.95 E-value=7.3e-27 Score=169.29 Aligned_cols=122 Identities=39% Similarity=0.587 Sum_probs=113.4
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHh
Q 028370 37 TPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAK 116 (210)
Q Consensus 37 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~ 116 (210)
++|+.|++.|+.++|+.|+++|++++.. |..|+||||+|+..++.+++++|++.|++++.++.+ |.||||+|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~----d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~--g~TpLh~A~~ 79 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNAS----DSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSD--GRTPLHHAAE 79 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCc----CCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccC--CCCHHHHHHH
Confidence 4799999999999999999999999988 999999999999999999999999999999999887 9999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 117 ERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 117 ~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
.|+.+++++|+++|+++ +.+|..|.||||+|+.. +..+++++|.+...
T Consensus 80 ~g~~~~v~~Ll~~gadv--n~~d~~G~TpLh~A~~~--g~~~~v~~Ll~~ga 127 (169)
T 4gpm_A 80 NGHKEVVKLLISKGADV--NAKDSDGRTPLHHAAEN--GHKEVVKLLISKGA 127 (169)
T ss_dssp TTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHT--TCHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHCcCCC--CCCCCCCCCHHHHHHHc--CCHHHHHHHHHcCC
Confidence 99999999999999966 88999999999999954 45789999887643
No 8
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=1.1e-26 Score=167.55 Aligned_cols=148 Identities=24% Similarity=0.348 Sum_probs=128.7
Q ss_pred cchhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHH
Q 028370 10 LGPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMD 89 (210)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 89 (210)
.|.+......... ..+++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.++++
T Consensus 13 ~g~~~~v~~ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~ 86 (167)
T 3v31_A 13 QGEMLYLATRIEQ--ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLL----GKGRESALSLACSKGYTDIVK 86 (167)
T ss_dssp TTCHHHHHHHHHH--SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CTTCCCHHHHHHHHTCHHHHH
T ss_pred CCCHHHHHHHHHc--CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCc----CCCCCcHHHHHHHcCCHHHHH
Confidence 3555555544443 3557889999999999999999999999999999999988 899999999999999999999
Q ss_pred HHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 90 VLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 90 ~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
+|++.|++++..+.. |.||||+|+..|+.+++++|+++|+++ +.++..|.||+++|+. .+..+++++|.+....
T Consensus 87 ~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~l~~A~~--~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 87 MLLDCGVDVNEYDWN--GGTPLLYAVHGNHVKCVKMLLESGADP--TIETDSGYNSMDLAVA--LGYRSVQQVIESHLLK 160 (167)
T ss_dssp HHHHHTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHH--HTCHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCcCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHH--cCcHHHHHHHHHHHHH
Confidence 999999999988877 999999999999999999999999965 8899999999999994 4457888888776543
No 9
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1e-26 Score=168.16 Aligned_cols=144 Identities=36% Similarity=0.511 Sum_probs=119.5
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDV 90 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (210)
|....+...... ..+++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++
T Consensus 25 g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~~~~ 98 (169)
T 2y1l_E 25 GRDDEVRILMAN--GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAV----DHAGMTPLRLAALFGHLEIVEV 98 (169)
T ss_dssp TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc----CCCCCCHHHHHHHcCCHHHHHH
Confidence 444444433332 3456778889999999999999999999999999998887 8889999999999999999999
Q ss_pred HHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 91 LLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 91 Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|++.|++++..+.. |.||||+|+..|+.+++++|+++|+++ +.+|..|.||+++|+.. +..+++++|.+.
T Consensus 99 Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~l~~A~~~--~~~~~~~~L~~~ 168 (169)
T 2y1l_E 99 LLKNGADVNANDME--GHTPLHLAAMFGHLEIVEVLLKNGADV--NAQDKFGKTAFDISIDN--GNEDLAEILQKL 168 (169)
T ss_dssp HHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHT--TCHHHHHHHHTC
T ss_pred HHHcCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHh--CCHHHHHHHHHc
Confidence 99999999888777 899999999999999999999999965 88899999999999854 347888877653
No 10
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=9.3e-27 Score=165.67 Aligned_cols=140 Identities=28% Similarity=0.382 Sum_probs=121.0
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDV 90 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (210)
|....+........ +. ..|..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+++++
T Consensus 13 g~~~~v~~Ll~~g~--~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~ 85 (153)
T 1awc_B 13 GQDDEVRILMANGA--PF-TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR----TKVDRTPLHMAASEGHANIVEV 85 (153)
T ss_dssp TCHHHHHHHHHHTC--CC-CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCC----CTTCCCHHHHHHHHTCHHHHHH
T ss_pred CCHHHHHHHHHcCC--CC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC----CCCCCCHHHHHHHcChHHHHHH
Confidence 44444444444332 22 36888999999999999999999999999999988 8999999999999999999999
Q ss_pred HHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHh
Q 028370 91 LLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQ 163 (210)
Q Consensus 91 Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l 163 (210)
|+++|++++..+.. |.||||+|+..|+.+++++|+++|+++ +.+|..|.||+++|+.. +..+++++|
T Consensus 86 Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t~l~~A~~~--~~~~i~~~L 152 (153)
T 1awc_B 86 LLKHGADVNAKDML--KMTALHWATEHNHQEVVELLIKYGADV--HTQSKFCKTAFDISIDN--GNEDLAEIL 152 (153)
T ss_dssp HHTTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHT--TCHHHHHHH
T ss_pred HHHcCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCc--cccCCCCCCHHHHHHHc--CCHHHHHHh
Confidence 99999999998877 999999999999999999999999966 88999999999999954 446777766
No 11
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=6.1e-27 Score=163.56 Aligned_cols=126 Identities=32% Similarity=0.414 Sum_probs=114.6
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChH
Q 028370 31 TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTP 110 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tp 110 (210)
....|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..++.+++++|++.|++++..+.. |.||
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~--g~t~ 83 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAK----DEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAI--GFTP 83 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT--CCCH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCc----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC--CCCH
Confidence 5566889999999999999999999999999988 899999999999999999999999999999988877 9999
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 111 LHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 111 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
||+|+..|+.+++++|+++|+++ +.+|..|.|||++|+.. +..+++++|.+.
T Consensus 84 L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~tpl~~A~~~--~~~~~~~~Ll~~ 135 (136)
T 2jab_A 84 LHLAAFIGHLEIAEVLLKHGADV--NAQDKFGKTAFDISIGN--GNEDLAEILQKL 135 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHT--TCHHHHHHHHHC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC--cCcCCCCCCHHHHHHHC--CCHHHHHHHHHc
Confidence 99999999999999999999965 88999999999999954 447888887653
No 12
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.94 E-value=1.9e-26 Score=158.23 Aligned_cols=112 Identities=30% Similarity=0.399 Sum_probs=103.9
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChH
Q 028370 31 TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTP 110 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tp 110 (210)
.+..|.||||+|+..|+.++++.|++.|++++.. +..|+||||+|+..++.+++++|++.|++++..+.. |.||
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~--g~tp 76 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRT----LEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKH--HITP 76 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSC----CTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT--SCCH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCcCcc----CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC--CCCH
Confidence 3567899999999999999999999999999888 899999999999999999999999999999998877 9999
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 028370 111 LHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCP 150 (210)
Q Consensus 111 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~ 150 (210)
||+|+..|+.+++++|+++|+++ +.+|..|.||+++|.
T Consensus 77 L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 77 LLSAVYEGHVSCVKLLLSKGADK--TVKGPDGLTAFEATD 114 (123)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHhC
Confidence 99999999999999999999965 899999999999996
No 13
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=1.8e-26 Score=170.10 Aligned_cols=131 Identities=21% Similarity=0.238 Sum_probs=107.7
Q ss_pred hhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCC
Q 028370 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGAC 106 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 106 (210)
..+.+|..|+||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+++++|++.|++++..+..
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-- 100 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDK----DIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFS-- 100 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT--
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccc----cccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC--
Confidence 35668888888888888888888888888888888777 788888888888888888888888888888877766
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 107 GWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 107 g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
|.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+.. +..+++++|.+..
T Consensus 101 g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g 157 (192)
T 2rfm_A 101 GKTPLMWSIIFGYSEMSYFLLEHGANV--NDRNLEGETPLIVASKY--GRSEIVKKLLELG 157 (192)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCS--SCCCTTCCCHHHHHHHH--TCHHHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHc--CCHHHHHHHHHCC
Confidence 888888888888888888888888855 77888888888888843 4467888777663
No 14
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=1.3e-26 Score=165.27 Aligned_cols=144 Identities=26% Similarity=0.370 Sum_probs=125.7
Q ss_pred cchhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHH
Q 028370 10 LGPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMD 89 (210)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 89 (210)
.|....+...... ...+++.+|..|.||||+ +..|+.+++++|++.|++++.. +..|.||||+|+..|+.++++
T Consensus 12 ~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~ 85 (156)
T 1bd8_A 12 RGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQ----DTSGTSPVHDAARTGFLDTLK 85 (156)
T ss_dssp HTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHTTCHHHHH
T ss_pred hCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCc----CCCCCCHHHHHHHcCcHHHHH
Confidence 3555555555554 444678899999999999 9999999999999999999988 899999999999999999999
Q ss_pred HHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 90 VLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 90 ~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
+|++.|++++..+.. |.||||+|+..|+.+++++|++. +++ +.+|..|.||+++|+..+ ..+++++|.+.
T Consensus 86 ~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~-~~~--~~~~~~g~t~l~~A~~~~--~~~~v~~Ll~~ 155 (156)
T 1bd8_A 86 VLVEHGADVNVPDGT--GALPIHLAVQEGHTAVVSFLAAE-SDL--HRRDARGLTPLELALQRG--AQDLVDILQGH 155 (156)
T ss_dssp HHHHTTCCSCCCCTT--SCCHHHHHHHHTCHHHHHHHHTT-SCT--TCCCTTSCCHHHHHHHSC--CHHHHHHHHTT
T ss_pred HHHHcCCCCCCcCCC--CCcHHHHHHHhChHHHHHHHHhc-cCC--CCcCCCCCCHHHHHHHcC--cHHHHHHHHhh
Confidence 999999999998877 99999999999999999999999 754 889999999999999554 47888887653
No 15
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=2.1e-26 Score=178.76 Aligned_cols=116 Identities=31% Similarity=0.470 Sum_probs=84.0
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCCh
Q 028370 30 DTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWT 109 (210)
Q Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~t 109 (210)
.++..|.||+|.|+..++.++++.|++.|++++.. |..|+||||+|+..|+.+++++|++.|++++..+.. |.|
T Consensus 114 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~----d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~--g~t 187 (269)
T 4b93_B 114 ARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKK----DLSGNTPLIYACSGGHHELVALLLQHGASINASNNK--GNT 187 (269)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCC----CTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTT--SCB
T ss_pred ccCCCCCCccccccccChHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccC--CCc
Confidence 34444455555555555555555555555555555 777888888888888888888888888888877766 888
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccch
Q 028370 110 PLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLE 153 (210)
Q Consensus 110 pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~ 153 (210)
|||+|+..|+.++|++|+++|+++ +.+|..|.||||+|+..+
T Consensus 188 ~Lh~A~~~g~~~~v~~Ll~~Gad~--~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 188 ALHEAVIEKHVFVVELLLLHGASV--QVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCS--CCCCTTSCCSGGGSCTTC
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHhCC
Confidence 888888888888888888888855 778888888888887543
No 16
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=2.7e-26 Score=169.12 Aligned_cols=132 Identities=28% Similarity=0.320 Sum_probs=121.5
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
.+++.+|..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..++.+++++|++.|++++..+..
T Consensus 59 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~- 133 (192)
T 2rfm_A 59 DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTK----DFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLE- 133 (192)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCC----CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTT-
T ss_pred cccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCC----CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-
Confidence 456778899999999999999999999999999999988 899999999999999999999999999999988877
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
|.||||+|+..|+.+++++|+++|+++ +.+|..|.||+++|+.. +..+++++|.+..
T Consensus 134 -g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t~l~~A~~~--~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 134 -GETPLIVASKYGRSEIVKKLLELGADI--SARDLTGLTAEASARIF--GRQEVIKIFTEVR 190 (192)
T ss_dssp -CCCHHHHHHHHTCHHHHHHHHHTTCCT--TCBCTTSCBHHHHHHHT--TCHHHHHHHHHHH
T ss_pred -CCCHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHh--CcHHHHHHHHhcc
Confidence 999999999999999999999999965 88999999999999954 4578888887754
No 17
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.93 E-value=3.1e-26 Score=164.14 Aligned_cols=131 Identities=24% Similarity=0.352 Sum_probs=117.2
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
.+++.+|..|.||||+|+. |+.+++++|++.|++++.. +..|.||||+|+..|+.+++++|++.|++++..+..
T Consensus 29 ~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~- 102 (162)
T 1ihb_A 29 VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLK----DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNE- 102 (162)
T ss_dssp CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-
T ss_pred CCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-
Confidence 4567788999999999999 9999999999999999888 899999999999999999999999999999988877
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|.||||+|+..|+.+++++|+++|++. .+..+..|.||+++|+.. +..+++++|.+.
T Consensus 103 -g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~t~l~~A~~~--~~~~~~~~Ll~~ 159 (162)
T 1ihb_A 103 -GNLPLHLAAKEGHLRVVEFLVKHTASN-VGHRNHKGDTACDLARLY--GRNEVVSLMQAN 159 (162)
T ss_dssp -SCCHHHHHHHTTCHHHHHHHHHHSCCC-TTCCCTTSCCHHHHHHHT--TCHHHHHHHHHT
T ss_pred -CCCHHHHHHHcCCHHHHHHHHHccCCC-CCCcCCCCCcHHHHHHHc--CCHHHHHHHHHh
Confidence 999999999999999999999999952 478899999999999954 457888888764
No 18
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=8.8e-26 Score=154.78 Aligned_cols=123 Identities=46% Similarity=0.729 Sum_probs=113.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHH
Q 028370 34 RGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHT 113 (210)
Q Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~ 113 (210)
+|+||||.|++.|+.+++++|++.|++++.. +..|.||||+|+..++.+++++|++.|++++..+.. |.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~----~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~--g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAK----DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN--GRTPLHL 74 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCC----CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT--SCCHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCc----CCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCC--CCcHHHH
Confidence 5899999999999999999999999999887 899999999999999999999999999999988877 9999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 114 AAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 114 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|+..|+.+++++|+++|+++ +.+|..|.||+++|+.. +..+++++|.+.
T Consensus 75 A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~l~~A~~~--~~~~~~~~Ll~~ 123 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAGADV--NAKDKNGRTPLHLAARN--GHLEVVKLLLEA 123 (126)
T ss_dssp HHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHT--TCHHHHHHHHHH
T ss_pred HHHcChHHHHHHHHHcCCCC--cccCCCCCCHHHHHHHc--CcHHHHHHHHHc
Confidence 99999999999999999965 88999999999999954 457888888764
No 19
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.93 E-value=3.3e-26 Score=177.61 Aligned_cols=132 Identities=28% Similarity=0.387 Sum_probs=122.7
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
.+++.+|.+|+||||+|+..|+.+++++|++.|++++.. +..|.||+++|+..++.+++++|++.|++++..+..
T Consensus 77 advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~----~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~- 151 (269)
T 4b93_B 77 LGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGAR----NADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLS- 151 (269)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCC----CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-
T ss_pred CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCcc----CCCCCCccccccccChHHHHHHHHHCCCCCCCCCCC-
Confidence 457789999999999999999999999999999999988 899999999999999999999999999999998877
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+.. +..+++++|.+..
T Consensus 152 -g~TpL~~A~~~g~~~~v~~Ll~~gadv--n~~~~~g~t~Lh~A~~~--g~~~~v~~Ll~~G 208 (269)
T 4b93_B 152 -GNTPLIYACSGGHHELVALLLQHGASI--NASNNKGNTALHEAVIE--KHVFVVELLLLHG 208 (269)
T ss_dssp -CCCHHHHHHHTTCGGGHHHHHHTTCCT--TCBCTTSCBHHHHHHHT--TCHHHHHHHHHTT
T ss_pred -CCCHHHHHHHCCCHHHHHHHHHCCCCC--CccccCCCcHHHHHHHc--CCHHHHHHHHHCC
Confidence 999999999999999999999999966 88999999999999954 4578999998764
No 20
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=2.4e-26 Score=164.15 Aligned_cols=128 Identities=25% Similarity=0.361 Sum_probs=114.6
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCC
Q 028370 29 IDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGW 108 (210)
Q Consensus 29 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~ 108 (210)
...+..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+ .|+.+++++|++.|++++..+.. |.
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~--g~ 78 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAP----NSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPA--TL 78 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCC----CSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTT--TC
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCC----CCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCC--CC
Confidence 457888999999999999999999999999999988 899999999985 89999999999999999999877 89
Q ss_pred h-HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 109 T-PLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 109 t-pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
| |||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+. .+..+++++|.+..
T Consensus 79 ttpL~~A~~~~~~~~v~~Ll~~ga~~--~~~d~~g~tpl~~A~~--~~~~~~v~~Ll~~g 134 (156)
T 1bi7_B 79 TRPVHDAAREGFLDTLVVLHRAGARL--DVRDAWGRLPVDLAEE--LGHRDVARYLRAAA 134 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCS--SCCCTTCCCHHHHHHH--HTCHHHHHHHSSCC
T ss_pred cHHHHHHHHCCCHHHHHHHHHcCCCC--cccCCCCCCHHHHHHH--hCHHHHHHHHHHcC
Confidence 8 999999999999999999999966 8899999999999994 44578898887653
No 21
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=3.7e-26 Score=175.84 Aligned_cols=135 Identities=24% Similarity=0.231 Sum_probs=120.1
Q ss_pred hcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCC--------------CCCCcHHHHHHHCCcHHHHHHHHH
Q 028370 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPK--------------SKGVTPLHLAAQGGHLEVMDVLLE 93 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~--------------~~g~t~L~~A~~~~~~~~v~~Ll~ 93 (210)
+...|..|+||||+|+..|+.+++++|+++|++++.. + ..|.||||+|+..|+.+++++|++
T Consensus 86 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~----~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 161 (260)
T 3jxi_A 86 FRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ----ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTE 161 (260)
T ss_dssp BCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc----ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 3445668999999999999999999999999999987 6 579999999999999999999999
Q ss_pred ---cCCCCCcccCCCCCChHHHHHHhcCC---------HHHHHHHHHcCCCCCC-----CCCCCCCCCcccccccchHHH
Q 028370 94 ---RGADIDARTKGACGWTPLHTAAKERK---------KEAVRFLIENGAFLPD-----DINDSRFNPPLHYCPSLEWAY 156 (210)
Q Consensus 94 ---~g~~~~~~~~~~~g~tpL~~A~~~g~---------~~~v~~Ll~~g~~~~~-----~~~~~~g~t~l~~a~~~~~~~ 156 (210)
.|++++.++.. |.||||+|+..++ .+++++|+++|++++. +.+|..|.||||+|+.. +.
T Consensus 162 ~~~~ga~~~~~d~~--g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~--g~ 237 (260)
T 3jxi_A 162 NGHKQADLRRQDSR--GNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKT--GK 237 (260)
T ss_dssp CSSCCCCTTCCCTT--SCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT--TC
T ss_pred ccccCCCCcccCCC--CCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHc--CC
Confidence 99999998887 9999999998887 7999999999996643 67999999999999954 45
Q ss_pred HHHHHHhhhhhhcC
Q 028370 157 EEMMRFQRESFSAG 170 (210)
Q Consensus 157 ~~~~~~l~~~~~~~ 170 (210)
.+++++|.+.....
T Consensus 238 ~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 238 IGIFQHIIRREIAD 251 (260)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCc
Confidence 89999998876554
No 22
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.93 E-value=4.5e-25 Score=166.92 Aligned_cols=142 Identities=27% Similarity=0.254 Sum_probs=116.6
Q ss_pred hhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccc-cCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccC
Q 028370 25 FRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAA-WGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTK 103 (210)
Q Consensus 25 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 103 (210)
..+++.+|..|+||||+|+..|+.+++++|++.|+++.... ...+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 27 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 106 (232)
T 2rfa_A 27 GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARAT 106 (232)
T ss_dssp CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCC
T ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccC
Confidence 44577789999999999999999999999999998763211 11277899999999999999999999999999988765
Q ss_pred -----------CCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHH--HHHHHHhhhhhh
Q 028370 104 -----------GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAY--EEMMRFQRESFS 168 (210)
Q Consensus 104 -----------~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~--~~~~~~l~~~~~ 168 (210)
+..|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..+... .+++++|.+...
T Consensus 107 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~ 182 (232)
T 2rfa_A 107 GSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI--RAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDG 182 (232)
T ss_dssp SGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTC
T ss_pred CcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCC
Confidence 123999999999999999999999999966 889999999999999655321 234477766543
No 23
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=3.1e-25 Score=168.25 Aligned_cols=134 Identities=23% Similarity=0.350 Sum_probs=119.1
Q ss_pred hcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCC
Q 028370 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACG 107 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g 107 (210)
.+..+..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+++++|++.|++++..+.. |
T Consensus 14 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~--g 87 (229)
T 2vge_A 14 ARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQP----NEEGITALHNAICGANYSIVDFLITAGANVNSPDSH--G 87 (229)
T ss_dssp CCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--C
T ss_pred ccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC--C
Confidence 3445667889999999999999999999999999988 999999999999999999999999999999999887 9
Q ss_pred ChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCC-CCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 108 WTPLHTAAKERKKEAVRFLIENGAFLPDDIND-SRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 108 ~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
.||||+|+..|+.+++++|+++|+++ +..+ ..|.|||++|+....+..+++++|.+....
T Consensus 88 ~tpLh~A~~~g~~~~v~~Ll~~ga~~--~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~ 148 (229)
T 2vge_A 88 WTPLHCAASCNDTVICMALVQHGAAI--FATTLSDGATAFEKCDPYREGYADCATYLADVEQS 148 (229)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCT--TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCc--ccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCC
Confidence 99999999999999999999999976 6665 699999999932255668999999887544
No 24
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=1e-24 Score=165.55 Aligned_cols=127 Identities=24% Similarity=0.393 Sum_probs=75.9
Q ss_pred hcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCC-CCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCC
Q 028370 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPK-SKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGAC 106 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 106 (210)
++.+|..|.||||+|+..|+.+++++|++.|++++.. + ..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 109 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-- 182 (241)
T 1k1a_A 109 LEARNYDGLTALHVAVNTECQETVQLLLERGADIDAV----DIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYS-- 182 (241)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC----CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTT--
T ss_pred ccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc----cccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC--
Confidence 3445556666666666666666666666666666554 3 45666666666666666666666666666655554
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhh
Q 028370 107 GWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQR 164 (210)
Q Consensus 107 g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~ 164 (210)
|.||||+|+..|+.+++++|+++|+++ +.+|..|.||+++|+ ..+..++++.+.
T Consensus 183 g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~tpl~~A~--~~~~~~i~~~l~ 236 (241)
T 1k1a_A 183 GSSALHSASGRGLLPLVRTLVRSGADS--SLKNCHNDTPLMVAR--SRRVIDILRGKA 236 (241)
T ss_dssp SCBHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCTTTTCS--SHHHHHHHTC--
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCCC--CCcCCCCCCHHHHHH--hcCcHHHHhhhc
Confidence 666666666666666666666666643 556666666666666 333455554443
No 25
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.93 E-value=1.8e-25 Score=171.62 Aligned_cols=146 Identities=24% Similarity=0.293 Sum_probs=111.9
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCC-CccccccCCCCCCCcHHHHHHHCCcHHHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGM-DVNVAAWGPKSKGVTPLHLAAQGGHLEVMD 89 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 89 (210)
|....+...... ..+++.+|..|.||||+|+..|+.+++++|++.++ +++.. +..|.||||+|+..++.++++
T Consensus 68 g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~----~~~g~t~L~~A~~~~~~~~v~ 141 (253)
T 1yyh_A 68 SRSDAAKRLLEA--SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDAR----MHDGTTPLILAARLAVEGMLE 141 (253)
T ss_dssp TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCC----CTTCCCHHHHHHHHTCSSHHH
T ss_pred CCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccc----CCCCCcHHHHHHHcChHHHHH
Confidence 444444444332 45567788888888888888888888888888876 66666 778888888888888888888
Q ss_pred HHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 90 VLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 90 ~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
+|++.|++++..+.. |.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+. .+..+++++|.+...
T Consensus 142 ~Ll~~g~~~~~~d~~--g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~tpL~~A~~--~~~~~~v~~Ll~~ga 214 (253)
T 1yyh_A 142 DLINSHADVNAVDDL--GKSALHWAAAVNNVDAAVVLLKNGANK--DMQNNREETPLFLAAR--EGSYETAKVLLDHFA 214 (253)
T ss_dssp HHHHTTCCTTCBCTT--SCBHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHH--HTCHHHHHHHHHTTC
T ss_pred HHHHcCCCCCCcCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHH--CCCHHHHHHHHHcCC
Confidence 888888888877766 888888888888888888888888855 7778888888888884 344677887777643
No 26
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.93 E-value=1.4e-24 Score=163.98 Aligned_cols=133 Identities=37% Similarity=0.487 Sum_probs=118.7
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
.+++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..++.+++++|++.|++++..+..
T Consensus 64 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~- 138 (231)
T 3aji_A 64 VPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAV----NQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHY- 138 (231)
T ss_dssp CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-
T ss_pred CCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-
Confidence 356778889999999999999999999999999999887 889999999999999999999999999999888777
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.. +..+++++|.+...
T Consensus 139 -g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~ga 196 (231)
T 3aji_A 139 -DATAMHRAAAKGNLKMVHILLFYKAST--NIQDTEGNTPLHLACDE--ERVEEAKFLVTQGA 196 (231)
T ss_dssp -SCCHHHHHHHHTCHHHHHHHHHTTCCS--CCCCTTSCCHHHHHHHT--TCHHHHHHHHHTTC
T ss_pred -CCcHHHHHHHcCCHHHHHHHHhcCCCc--cccCCCCCCHHHHHHHC--CCHHHHHHHHHCCC
Confidence 999999999999999999999999965 88899999999999854 44788888887743
No 27
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.93 E-value=6.6e-25 Score=166.00 Aligned_cols=139 Identities=24% Similarity=0.222 Sum_probs=119.5
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHHCCCCcccccc---------CCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCC
Q 028370 29 IDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAW---------GPKSKGVTPLHLAAQGGHLEVMDVLLERGADID 99 (210)
Q Consensus 29 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 99 (210)
+.+|..|.||||+|+..|+.+++++|+++|++++.... ..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 69 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 148 (232)
T 2rfa_A 69 TSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR 148 (232)
T ss_dssp CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred cccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 45677999999999999999999999999999987610 002279999999999999999999999999999
Q ss_pred cccCCCCCChHHHHHHhcCCHHHH----HHHHHcCCCCCC----CCCCCCCCCcccccccchHHHHHHHHHhhhhhhcCC
Q 028370 100 ARTKGACGWTPLHTAAKERKKEAV----RFLIENGAFLPD----DINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSAGE 171 (210)
Q Consensus 100 ~~~~~~~g~tpL~~A~~~g~~~~v----~~Ll~~g~~~~~----~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~~~ 171 (210)
..+.. |.||||+|+..|+.+++ ++|+++|++... +.+|..|.|||++|+. .+..+++++|.+......
T Consensus 149 ~~d~~--g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~--~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 149 AQDSL--GNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGV--EGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp CCCTT--SCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHH--HTCHHHHHHHHHHHHHC-
T ss_pred CCCCC--CCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHH--cCCHHHHHHHHhcCccch
Confidence 99887 99999999999999988 999999995421 4789999999999994 456899999998876653
No 28
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=1.2e-25 Score=169.31 Aligned_cols=129 Identities=23% Similarity=0.389 Sum_probs=114.0
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHc-CCCCCcccCCCCC
Q 028370 29 IDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLER-GADIDARTKGACG 107 (210)
Q Consensus 29 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~g 107 (210)
...|..|.||||+|+..|+.++++.|++.|++++.. +..|+||||+|+..|+.+++++|++. |++++..+.. |
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~--g 140 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGL----DKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKL--G 140 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTT--S
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCCcccc----CCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCC--C
Confidence 446778999999999999999999999999999988 89999999999999999999999998 9999999887 9
Q ss_pred ChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 108 WTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 108 ~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
.||||+|+..|+.+++++|+++|+++ +.+|..|.||+++|+. .+..++++.+....
T Consensus 141 ~tpL~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t~l~~A~~--~~~~~~l~~l~~~~ 196 (222)
T 3ehr_A 141 DTALHAAAWKGYADIVQLLLAKGART--DLRNIEKKLAFDMATN--AACASLLKKKQGTD 196 (222)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCS--CCCCTTSCCHHHHCCS--HHHHHHHC------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC--ccccCCCCCHHHHhcc--hhHHHHHHHHhccc
Confidence 99999999999999999999999966 8999999999999994 45677777666543
No 29
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.93 E-value=3.7e-25 Score=172.28 Aligned_cols=141 Identities=23% Similarity=0.269 Sum_probs=108.2
Q ss_pred HHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCC-CccccccCCCCCCCcHHHHHH-----HCCcHHHH
Q 028370 15 LQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGM-DVNVAAWGPKSKGVTPLHLAA-----QGGHLEVM 88 (210)
Q Consensus 15 ~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~~~~g~t~L~~A~-----~~~~~~~v 88 (210)
.......+.....++.+|..|+||||+|+..|+.+++++|++.|+ +++.. +..|.||||+|+ ..++.+++
T Consensus 91 ~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~----~~~g~tpL~~a~~~~~~~~~~~~~v 166 (276)
T 4hbd_A 91 TFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQ----NRAGYSPIMLTALATLKTQDDIETV 166 (276)
T ss_dssp HHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCC----CTTSCCHHHHGGGCCCCSHHHHHHH
T ss_pred HHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCC----CCCCCCHHHHHHHHHhhhhhhHHHH
Confidence 333333333334578899999999999999999999999999998 88777 777888888887 45667788
Q ss_pred HHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhh
Q 028370 89 DVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRE 165 (210)
Q Consensus 89 ~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~ 165 (210)
++|++.|.+++..+.. |.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.. +..+++++|.+
T Consensus 167 ~~Ll~~g~~~~~~~~~--g~tpLh~A~~~g~~~~v~~Ll~~gad~--n~~d~~G~TpLh~A~~~--g~~~iv~~Ll~ 237 (276)
T 4hbd_A 167 LQLFRLGNINAKASQA--GQTALMLAVSHGRVDVVKALLACEADV--NVQDDDGSTALMCACEH--GHKEIAGLLLA 237 (276)
T ss_dssp HHHHHHSCTTCCCTTT--CCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHH--TCHHHHHHHHT
T ss_pred HHHHHcCCCccccCCC--CCCHHHHHHHcCCHHHHHHHHhCCCCC--CCCCCCCCCHHHHHHHC--CCHHHHHHHHh
Confidence 8888877777666655 778888888888888888888888855 77777888888888743 44677777776
No 30
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.93 E-value=1e-24 Score=163.94 Aligned_cols=147 Identities=24% Similarity=0.291 Sum_probs=116.4
Q ss_pred cchhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCC-CccccccCCCCCCCcHHHHHHHCCcHHHH
Q 028370 10 LGPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGM-DVNVAAWGPKSKGVTPLHLAAQGGHLEVM 88 (210)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 88 (210)
.|....+...... ..+++.+|..|.||||+|+..|+.+++++|++.++ +++.. +..|.||||+|+..++.+++
T Consensus 35 ~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~----~~~g~t~L~~A~~~~~~~~~ 108 (223)
T 2f8y_A 35 YSRSDAAKRLLEA--SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDAR----MHDGTTPLILAARLAVEGML 108 (223)
T ss_dssp TTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCC----CTTCCCHHHHHHHHTCHHHH
T ss_pred cCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC----CCCCCcHHHHHHHhCcHHHH
Confidence 3455544444433 44567788888899999999999999999988876 66666 78888899999988889999
Q ss_pred HHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 89 DVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 89 ~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
++|++.|++++..+.. |.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+. .+..+++++|.+...
T Consensus 109 ~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~--~~~~~~v~~Ll~~ga 182 (223)
T 2f8y_A 109 EDLINSHADVNAVDDL--GKSALHWAAAVNNVDAAVVLLKNGANK--DMQNNREETPLFLAAR--EGSYETAKVLLDHFA 182 (223)
T ss_dssp HHHHHTTCCTTCBCTT--SCBHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHH--HTCHHHHHHHHHTTC
T ss_pred HHHHHcCCCCcCcCCC--CCcHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCcCHHHHHHH--cCCHHHHHHHHHcCC
Confidence 9998888888888766 889999999888899999999888855 7788888899998884 345788888877643
No 31
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=3.7e-26 Score=168.11 Aligned_cols=133 Identities=20% Similarity=0.192 Sum_probs=114.5
Q ss_pred hhhcccC-CCCChHHHHHHHcCCH----HHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCc------HHHHHHHHHc
Q 028370 26 RSVIDTD-DRGWTPLHIGARKGDI----KLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGH------LEVMDVLLER 94 (210)
Q Consensus 26 ~~~~~~d-~~g~t~L~~A~~~g~~----~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~------~~~v~~Ll~~ 94 (210)
...+..+ ..|+||||+|+.+|+. +++++|+++|++++.. +..|+||||+|+..++ .+++++|++.
T Consensus 28 ~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~----d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~ 103 (186)
T 3t8k_A 28 KGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSR----TKEGTTLFFPLFQGGGNDITGTTELCKIFLEK 103 (186)
T ss_dssp HSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCC----CTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred cCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCC----CCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC
Confidence 3445556 6799999999999985 5899999999999998 9999999999999886 5789999999
Q ss_pred CCCCCcccCCCCCC-hHHHHHHhcC-----CHHHHHHHHH-cCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 95 GADIDARTKGACGW-TPLHTAAKER-----KKEAVRFLIE-NGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 95 g~~~~~~~~~~~g~-tpL~~A~~~g-----~~~~v~~Ll~-~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
|++++.++.. |. ||||+|+..+ +.+++++|++ +|+++ +.+|..|.||||+|+..+ ..+++++|.+..
T Consensus 104 Gadin~~d~~--g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~--~~~d~~G~TpL~~A~~~~--~~~~v~~L~~~~ 177 (186)
T 3t8k_A 104 GADITALYKP--YKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL--LIKDKWGLTALEFVKRCQ--KPIALKMMEDYI 177 (186)
T ss_dssp TCCSSSCBGG--GTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT--TCCCTTSCCHHHHHHTTT--CHHHHHHHHHHH
T ss_pred CCCCCccCCC--cCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC--cccCCCCCCHHHHHHHcC--CHHHHHHHHHHH
Confidence 9999999888 99 9999999844 4679999999 99966 999999999999999544 467777777654
Q ss_pred h
Q 028370 168 S 168 (210)
Q Consensus 168 ~ 168 (210)
.
T Consensus 178 ~ 178 (186)
T 3t8k_A 178 K 178 (186)
T ss_dssp H
T ss_pred H
Confidence 3
No 32
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.92 E-value=1.9e-24 Score=164.11 Aligned_cols=152 Identities=23% Similarity=0.265 Sum_probs=104.7
Q ss_pred cchhHHHHHHhhHHHhh-------hhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCcccc--ccCCCCCCCcHHHHHH
Q 028370 10 LGPFTLQRKASRKRFFR-------SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVA--AWGPKSKGVTPLHLAA 80 (210)
Q Consensus 10 ~~~~~~~~~~~~~~~~~-------~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~~~~~g~t~L~~A~ 80 (210)
.+|+..+........++ +++.+|..|.||||+|+..|+.+++++|++.++++... ....+..|.||||+|+
T Consensus 46 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~ 125 (236)
T 1ikn_D 46 QTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLAS 125 (236)
T ss_dssp CCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHH
Confidence 35555555544444332 34456677778888888888888888888777653110 0112667788888888
Q ss_pred HCCcHHHHHHHHHcCCCCCcccC-CCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHH
Q 028370 81 QGGHLEVMDVLLERGADIDARTK-GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEM 159 (210)
Q Consensus 81 ~~~~~~~v~~Ll~~g~~~~~~~~-~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 159 (210)
..|+.+++++|++.|++++..+. . |.||||+|+..|+.+++++|+++|+++ +.+|..|.||+++|+..+ ..++
T Consensus 126 ~~~~~~~v~~Ll~~g~~~~~~~~~~--g~tpL~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~tpl~~A~~~~--~~~~ 199 (236)
T 1ikn_D 126 IHGYLGIVELLVSLGADVNAQEPCN--GRTALHLAVDLQNPDLVSLLLKCGADV--NRVTYQGYSPYQLTWGRP--STRI 199 (236)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTT--CCCHHHHHHHTTCHHHHHHHHTTTCCS--CCCCTTCCCGGGGCTTSS--CHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CcccCCCCCHHHHHHccC--chHH
Confidence 88888888888888888777765 4 778888888888888888888888854 777788888888887443 4677
Q ss_pred HHHhhhhh
Q 028370 160 MRFQRESF 167 (210)
Q Consensus 160 ~~~l~~~~ 167 (210)
+++|.+..
T Consensus 200 ~~~Ll~~g 207 (236)
T 1ikn_D 200 QQQLGQLT 207 (236)
T ss_dssp HHHHHTTS
T ss_pred HHHHHHcc
Confidence 77776653
No 33
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.92 E-value=3.5e-25 Score=171.67 Aligned_cols=132 Identities=28% Similarity=0.345 Sum_probs=118.2
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCC--------------CCCcHHHHHHHCCcHHHHHHHHH---
Q 028370 31 TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKS--------------KGVTPLHLAAQGGHLEVMDVLLE--- 93 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~--------------~g~t~L~~A~~~~~~~~v~~Ll~--- 93 (210)
+|..|.||||+|+..|+.+++++|+++|++++.. +. .|.||||+|+..|+.+++++|++
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~----~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 172 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGADVQAA----ANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSW 172 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----BCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcc----ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 6779999999999999999999999999999887 54 79999999999999999999999
Q ss_pred cCCCCCcccCCCCCChHHHHHHhcCC---------HHHHHHHHHcCCCCCC-----CCCCCCCCCcccccccchHHHHHH
Q 028370 94 RGADIDARTKGACGWTPLHTAAKERK---------KEAVRFLIENGAFLPD-----DINDSRFNPPLHYCPSLEWAYEEM 159 (210)
Q Consensus 94 ~g~~~~~~~~~~~g~tpL~~A~~~g~---------~~~v~~Ll~~g~~~~~-----~~~~~~g~t~l~~a~~~~~~~~~~ 159 (210)
.|++++..+.. |.||||+|+..|+ .+++++|+++|++++. +.+|..|.||||+|+.. +..++
T Consensus 173 ~gad~~~~d~~--g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~--g~~~i 248 (273)
T 2pnn_A 173 QPADISARDSV--GNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASS--GKIGV 248 (273)
T ss_dssp CCCCTTCCCTT--SCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT--TCHHH
T ss_pred CCCCceeeCCC--CCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHh--ChHHH
Confidence 99999998887 9999999999988 8999999999997643 35899999999999954 45899
Q ss_pred HHHhhhhhhcC
Q 028370 160 MRFQRESFSAG 170 (210)
Q Consensus 160 ~~~l~~~~~~~ 170 (210)
+++|.+....+
T Consensus 249 v~~Ll~~ga~d 259 (273)
T 2pnn_A 249 LAYILQREIHE 259 (273)
T ss_dssp HHHHHHHHTC-
T ss_pred HHHHHHCCCCC
Confidence 99999876644
No 34
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.92 E-value=8.5e-25 Score=164.77 Aligned_cols=146 Identities=27% Similarity=0.353 Sum_probs=100.0
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCC--CCccc-cccCCCCCCCcHHHHHHHCCcHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEG--MDVNV-AAWGPKSKGVTPLHLAAQGGHLEV 87 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~ 87 (210)
|....+...... .....+.+|..|.||||+|+..|+.+++++|++.| ++++. . +..|.||||+|+..|+.++
T Consensus 13 g~~~~v~~Ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~----~~~g~t~L~~A~~~~~~~~ 87 (228)
T 2dzn_A 13 NEFFKVQELLHS-KPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYP----DDSGWTPFHIACSVGNLEV 87 (228)
T ss_dssp TCHHHHHHHHHH-CGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCC----CTTSCCHHHHHHHHCCHHH
T ss_pred CCHHHHHHHHhc-CccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccC----CCCCCCHHHHHHHcCCHHH
Confidence 444444443332 23334457777888888888888888888888877 34333 3 6677788888887777888
Q ss_pred HHHHHHcC--CCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhh
Q 028370 88 MDVLLERG--ADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRE 165 (210)
Q Consensus 88 v~~Ll~~g--~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~ 165 (210)
+++|++.| ++++..+.. |.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+.. +..+++++|.+
T Consensus 88 ~~~Ll~~g~~~~~~~~~~~--g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~ 161 (228)
T 2dzn_A 88 VKSLYDRPLKPDLNKITNQ--GVTCLHLAVGKKWFEVSQFLIENGASV--RIKDKFNQIPLHRAASV--GSLKLIELLCG 161 (228)
T ss_dssp HHHHHSSSSCCCTTCCCTT--CCCHHHHHHHTTCHHHHHHHHHTTCCS--CCCCTTSCCHHHHHHHT--TCHHHHHHHHT
T ss_pred HHHHHhCCCCcccccCCcC--CCCHHHHHHHcCCHhHHHHHHHcCCCc--cccCCCCCCHHHHHHHc--CCHHHHHHHHh
Confidence 88887777 555555554 777888887777778888888777754 67777777888777743 34677777776
Q ss_pred hh
Q 028370 166 SF 167 (210)
Q Consensus 166 ~~ 167 (210)
..
T Consensus 162 ~g 163 (228)
T 2dzn_A 162 LG 163 (228)
T ss_dssp TT
T ss_pred cC
Confidence 65
No 35
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.92 E-value=7.9e-25 Score=157.70 Aligned_cols=124 Identities=24% Similarity=0.304 Sum_probs=114.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHH
Q 028370 34 RGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHT 113 (210)
Q Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~ 113 (210)
.|.||||.|+..|+.+++++|++.+++++.. +..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~ 75 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHT----DEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKG--RESALSL 75 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--CCCHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCC----CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCC--CCcHHHH
Confidence 5889999999999999999999999998888 899999999999999999999999999999988877 9999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 114 AAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 114 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
|+..|+.+++++|+++|+++ +..+..|.||||+|+.. +..+++++|.+..
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g 125 (167)
T 3v31_A 76 ACSKGYTDIVKMLLDCGVDV--NEYDWNGGTPLLYAVHG--NHVKCVKMLLESG 125 (167)
T ss_dssp HHHHTCHHHHHHHHHHTCCT--TCCCTTSCCHHHHHHHT--TCHHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHCCCCC--CcCCCCCCCHHHHHHHc--CCHHHHHHHHHcC
Confidence 99999999999999999966 88999999999999954 4578899888753
No 36
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.92 E-value=3.9e-24 Score=161.54 Aligned_cols=147 Identities=29% Similarity=0.368 Sum_probs=127.0
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDV 90 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (210)
|.+........ ......+.+|..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+++++
T Consensus 17 g~~~~v~~ll~-~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~ 91 (231)
T 3aji_A 17 GKLDELKERIL-ADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK----DDAGWSPLHIAASAGXDEIVKA 91 (231)
T ss_dssp TCHHHHHHHHH-HCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCC----CTTSCCHHHHHHHHTCHHHHHH
T ss_pred CCHHHHHHHHH-hchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCc----CCCCCCHHHHHHHcCHHHHHHH
Confidence 44444443333 223446778999999999999999999999999999999988 8999999999999999999999
Q ss_pred HHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 91 LLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 91 Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
|++.|++++..+.. |.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+.. +..+++++|.+...
T Consensus 92 Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g~ 163 (231)
T 3aji_A 92 LLVKGAHVNAVNQN--GCTPLHYAASKNRHEIAVMLLEGGANP--DAKDHYDATAMHRAAAK--GNLKMVHILLFYKA 163 (231)
T ss_dssp HHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHH--TCHHHHHHHHHTTC
T ss_pred HHHcCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCcHHHHHHHc--CCHHHHHHHHhcCC
Confidence 99999999988877 999999999999999999999999965 88999999999999944 45788888887543
No 37
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.92 E-value=3.7e-24 Score=165.10 Aligned_cols=132 Identities=27% Similarity=0.316 Sum_probs=109.3
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
.+++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.|++++.. .+
T Consensus 27 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~- 100 (261)
T 2xai_A 27 WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGV----TADWHTPLFNACVSGSWDCVNLLLQHGASVQPE-SD- 100 (261)
T ss_dssp CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCS-CT-
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-CC-
Confidence 456778888999999999999999999999999888877 888889999999999999999999988888743 23
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+.. +..+++++|.+...
T Consensus 101 -g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g~ 158 (261)
T 2xai_A 101 -LASPIHEAARRGHVECVNSLIAYGGNI--DHKISHLGTPLYLACEN--QQRACVKKLLESGA 158 (261)
T ss_dssp -TCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCBTTTBCHHHHHHHT--TCHHHHHHHHHHTC
T ss_pred -CCCHHHHHHHcCcHHHHHHHHHcCCCC--CcCCCCCCCHHHHHHHh--CCHHHHHHHHHcCC
Confidence 788999999888999999999988855 77888888999888844 34678888777643
No 38
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.92 E-value=3.1e-24 Score=161.28 Aligned_cols=125 Identities=30% Similarity=0.387 Sum_probs=66.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCC-CCCcccCCCCCChH
Q 028370 32 DDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGA-DIDARTKGACGWTP 110 (210)
Q Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~~~g~tp 110 (210)
|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.++ +++..+.. |.||
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~--g~t~ 95 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEASADANIQ----DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHD--GTTP 95 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTT--CCCH
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCc----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC--CCcH
Confidence 455555555555555555555555555555544 5555555555555555555555555544 44444443 5555
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 111 LHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 111 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
||+|+..|+.+++++|+++|+++ +..+..|.||||+|+.. +..+++++|.+.
T Consensus 96 L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~ 147 (223)
T 2f8y_A 96 LILAARLAVEGMLEDLINSHADV--NAVDDLGKSALHWAAAV--NNVDAAVVLLKN 147 (223)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCT--TCBCTTSCBHHHHHHHT--TCHHHHHHHHHT
T ss_pred HHHHHHhCcHHHHHHHHHcCCCC--cCcCCCCCcHHHHHHHc--CCHHHHHHHHHc
Confidence 55555555555555555555533 44555555555555532 224455555444
No 39
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=4.9e-25 Score=161.41 Aligned_cols=113 Identities=35% Similarity=0.436 Sum_probs=105.6
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCccc-CCCCCCh
Q 028370 31 TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDART-KGACGWT 109 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~~~g~t 109 (210)
.+..|.||||+|++.|+.++++.|++ |++++.. +..|+||||+|+..|+.+++++|++.|++++..+ .. |.|
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~----d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~--g~t 112 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDVDAV----DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG--GLT 112 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCC----CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSS--SCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCc----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCC--CCC
Confidence 45678999999999999999999999 9999988 8999999999999999999999999999999887 55 999
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccc
Q 028370 110 PLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSL 152 (210)
Q Consensus 110 pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~ 152 (210)
|||+|+..|+.+++++|+++|+++ +.+|..|.|||++|+..
T Consensus 113 pL~~A~~~~~~~~v~~Ll~~ga~~--~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 113 ALHMAAGYVRPEVVEALVELGADI--EVEDERGLTALELAREI 153 (183)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCT--TCCCTTSCCHHHHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHHcCCCC--cCCCCCCCCHHHHHHHh
Confidence 999999999999999999999965 89999999999999843
No 40
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.92 E-value=1.3e-24 Score=168.53 Aligned_cols=129 Identities=30% Similarity=0.384 Sum_probs=90.4
Q ss_pred hcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCC----------
Q 028370 28 VIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGAD---------- 97 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---------- 97 (210)
++.+|..|+||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.|++
T Consensus 38 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~----~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 113 (282)
T 1oy3_D 38 LDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVA----ERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYL 113 (282)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCC----CTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC----CCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHh
Confidence 5678888899999999999999999999888888876 66777777777777777777777766544
Q ss_pred -------------------------------------CCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCC
Q 028370 98 -------------------------------------IDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDS 140 (210)
Q Consensus 98 -------------------------------------~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~ 140 (210)
++..+.. |.||||+|+..|+.+++++|+++|+++ +..+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~ 189 (282)
T 1oy3_D 114 TQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYD--GHTPLHVAVIHKDAEMVRLLRDAGADL--NKPEP 189 (282)
T ss_dssp ------------------------------CCCGGGGTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHHTCCT--TCCCT
T ss_pred hcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCC--CcCHHHHHHHcCCHHHHHHHHHcCCCC--CCCCC
Confidence 3333333 667777777777777777777777654 44443
Q ss_pred -CCCCcccccccchHHHHHHHHHhhhh
Q 028370 141 -RFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 141 -~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
.|.||||+|+.. +..+++++|.+.
T Consensus 190 ~~g~tpL~~A~~~--~~~~~v~~Ll~~ 214 (282)
T 1oy3_D 190 TCGRTPLHLAVEA--QAASVLELLLKA 214 (282)
T ss_dssp TTCCCHHHHHHHT--TCHHHHHHHHHT
T ss_pred CCCcCHHHHHHHc--CCHHHHHHHHHc
Confidence 367777777643 335666666655
No 41
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.92 E-value=2.6e-24 Score=162.07 Aligned_cols=150 Identities=29% Similarity=0.384 Sum_probs=118.2
Q ss_pred cchhHHHHHHhhHHHhhhhcc-cCCCCChHHHHHHHcCCHHHHHHHHHCC--CCccccccCCCCCCCcHHHHHHHCCcHH
Q 028370 10 LGPFTLQRKASRKRFFRSVID-TDDRGWTPLHIGARKGDIKLVKQLLDEG--MDVNVAAWGPKSKGVTPLHLAAQGGHLE 86 (210)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 86 (210)
.|....+..........+++. +|..|.||||+|+..|+.+++++|+++| ++++.. +..|.||||+|+..++.+
T Consensus 46 ~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~----~~~g~t~L~~A~~~~~~~ 121 (228)
T 2dzn_A 46 FQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKI----TNQGVTCLHLAVGKKWFE 121 (228)
T ss_dssp TTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCC----CTTCCCHHHHHHHTTCHH
T ss_pred cCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccC----CcCCCCHHHHHHHcCCHh
Confidence 344444444444433344555 7888999999999999999999999888 777766 788899999999999999
Q ss_pred HHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcC-CCCCCCCCCCCCCCcccccccchHHHHHHHHHhhh
Q 028370 87 VMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENG-AFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRE 165 (210)
Q Consensus 87 ~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~ 165 (210)
++++|++.|++++..+.. |.||||+|+..|+.+++++|++.| +++ +.+|..|.||||+|+.. +..+++++|.+
T Consensus 122 ~~~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~d~~g~t~L~~A~~~--~~~~~v~~Ll~ 195 (228)
T 2dzn_A 122 VSQFLIENGASVRIKDKF--NQIPLHRAASVGSLKLIELLCGLGKSAV--NWQDKQGWTPLFHALAE--GHGDAAVLLVE 195 (228)
T ss_dssp HHHHHHHTTCCSCCCCTT--SCCHHHHHHHTTCHHHHHHHHTTTCCCS--CCCCTTSCCHHHHHHHT--TCHHHHHHHHH
T ss_pred HHHHHHHcCCCccccCCC--CCCHHHHHHHcCCHHHHHHHHhcCcccc--cCcCCCCCCHHHHHHHc--CCHHHHHHHHH
Confidence 999999999998888777 889999999999999999999998 744 78888999999999854 34788888884
Q ss_pred hhhc
Q 028370 166 SFSA 169 (210)
Q Consensus 166 ~~~~ 169 (210)
....
T Consensus 196 ~~ga 199 (228)
T 2dzn_A 196 KYGA 199 (228)
T ss_dssp HHCC
T ss_pred hcCC
Confidence 4333
No 42
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=4.1e-25 Score=168.47 Aligned_cols=130 Identities=26% Similarity=0.413 Sum_probs=115.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHH
Q 028370 32 DDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPL 111 (210)
Q Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL 111 (210)
+..|.||||.|+..|+.++++.|++.|++++.. |..|.||||+|+..|+.+++++|+++|++++..+.. |.|||
T Consensus 34 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~--g~tpL 107 (239)
T 1ycs_B 34 NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLP----NDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSD--GWTPL 107 (239)
T ss_dssp ---CHHHHHHHHHHTCHHHHHHHTSTTSSCCCC----CTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTT--CCCHH
T ss_pred CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCc----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC--CCCHH
Confidence 356899999999999999999999999999988 899999999999999999999999999999999887 99999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCC-CcccccccchHHHHHHHHHhhhhhhc
Q 028370 112 HTAAKERKKEAVRFLIENGAFLPDDINDSRFN-PPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 112 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~-t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
|+|+..|+.+++++|+++|+++ +..+..|. ||+++|.....+..+++++|.+....
T Consensus 108 ~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~ 164 (239)
T 1ycs_B 108 HCAASCNNVQVCKFLVESGAAV--FAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEK 164 (239)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT--TCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCc--ceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhc
Confidence 9999999999999999999966 77777776 99999954455667888888876544
No 43
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.92 E-value=4.7e-25 Score=169.37 Aligned_cols=131 Identities=28% Similarity=0.334 Sum_probs=116.5
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCC-------------CCcHHHHHHHCCcHHHHHHHHH---c
Q 028370 31 TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSK-------------GVTPLHLAAQGGHLEVMDVLLE---R 94 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~-------------g~t~L~~A~~~~~~~~v~~Ll~---~ 94 (210)
+|..|.||||+|+..|+.+++++|+++|++++.. +.. |.||||+|+..|+.+++++|++ .
T Consensus 86 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~----~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 86 EFYQGHSALHIAIEKRSLQCVKLLVENGADVHLR----ACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161 (256)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc----cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 4578999999999999999999999999999887 554 9999999999999999999999 9
Q ss_pred CCCCCcccCCCCCChHHHHHHh--cCCHH-------HHHHHHHcCCCCCC-----CCCCCCCCCcccccccchHHHHHHH
Q 028370 95 GADIDARTKGACGWTPLHTAAK--ERKKE-------AVRFLIENGAFLPD-----DINDSRFNPPLHYCPSLEWAYEEMM 160 (210)
Q Consensus 95 g~~~~~~~~~~~g~tpL~~A~~--~g~~~-------~v~~Ll~~g~~~~~-----~~~~~~g~t~l~~a~~~~~~~~~~~ 160 (210)
|++++..+.. |.||||+|+. .++.+ ++++|+++|++++. +.+|..|.||||+|+.. +..+++
T Consensus 162 ga~~n~~d~~--g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~--g~~~~v 237 (256)
T 2etb_A 162 PASLEATDSL--GNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKE--GKIEIF 237 (256)
T ss_dssp CCCTTCCCTT--SCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHT--TCHHHH
T ss_pred CCCcCccCCC--CCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHh--CCHHHH
Confidence 9999999887 9999999999 78888 99999999995422 77899999999999954 458899
Q ss_pred HHhhhhhhc
Q 028370 161 RFQRESFSA 169 (210)
Q Consensus 161 ~~l~~~~~~ 169 (210)
++|.+....
T Consensus 238 ~~Ll~~g~~ 246 (256)
T 2etb_A 238 RHILQREFS 246 (256)
T ss_dssp HHHHHHHHH
T ss_pred HHHHhCCCC
Confidence 988877544
No 44
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.92 E-value=2.1e-24 Score=169.00 Aligned_cols=147 Identities=27% Similarity=0.376 Sum_probs=122.6
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDV 90 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (210)
|.+..+...... ..+++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++
T Consensus 51 g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~----~~~g~tpL~~A~~~g~~~~v~~ 124 (299)
T 1s70_B 51 GDTEEVLRLLER--GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQP----DNEGWIPLHAAASCGYLDIAEY 124 (299)
T ss_dssp TCHHHHHHHHHH--CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHHTCHHHHHH
T ss_pred CCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC----CCCCCcHHHHHHHcCCHHHHHH
Confidence 444444444332 2457788999999999999999999999999999999888 8899999999999999999999
Q ss_pred HHHcCCCCCcccCC----------------------------------------------------------CCCChHHH
Q 028370 91 LLERGADIDARTKG----------------------------------------------------------ACGWTPLH 112 (210)
Q Consensus 91 Ll~~g~~~~~~~~~----------------------------------------------------------~~g~tpL~ 112 (210)
|++.|++++..+.. ..|.||||
T Consensus 125 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~ 204 (299)
T 1s70_B 125 LISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALH 204 (299)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHH
T ss_pred HHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHH
Confidence 99999988765432 23779999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 113 TAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 113 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.. +..+++++|.+..
T Consensus 205 ~A~~~g~~~~v~~Ll~~g~d~--~~~d~~g~tpL~~A~~~--~~~~~v~~Ll~~g 255 (299)
T 1s70_B 205 VAAAKGYTEVLKLLIQARYDV--NIKDYDGWTPLHAAAHW--GKEEACRILVENL 255 (299)
T ss_dssp HHHHHTCHHHHHHHHTTTCCT--TCCCTTCCCHHHHHHHT--TCHHHHHHHHHTT
T ss_pred HHHHCCcHHHHHHHHHcCCCC--CCcCCCCCcHHHHHHhc--CCHHHHHHHHHcC
Confidence 999999999999999999965 88999999999999954 4578888888764
No 45
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.92 E-value=1.4e-24 Score=156.93 Aligned_cols=128 Identities=37% Similarity=0.477 Sum_probs=115.6
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChH
Q 028370 31 TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTP 110 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tp 110 (210)
....+.++|+.|++.|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.|++++..+.. |.||
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~ 83 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADVNAE----DASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHA--GMTP 83 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC--CCCH
Confidence 5566789999999999999999999999999988 899999999999999999999999999999988877 9999
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 111 LHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 111 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.. +..+++++|.+...
T Consensus 84 L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g~ 137 (169)
T 2y1l_E 84 LRLAALFGHLEIVEVLLKNGADV--NANDMEGHTPLHLAAMF--GHLEIVEVLLKNGA 137 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHT--TCHHHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHc--CCHHHHHHHHHcCC
Confidence 99999999999999999999966 88999999999999954 45789998887643
No 46
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.92 E-value=2.6e-24 Score=165.16 Aligned_cols=128 Identities=30% Similarity=0.374 Sum_probs=93.9
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCC-CCCcccCCCCCC
Q 028370 30 DTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGA-DIDARTKGACGW 108 (210)
Q Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~~~g~ 108 (210)
..|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.++ +++..+.. |.
T Consensus 52 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~--g~ 125 (253)
T 1yyh_A 52 QTDRTGETALHLAARYSRSDAAKRLLEASADANIQ----DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHD--GT 125 (253)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTT--CC
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCC--CC
Confidence 35777777777777777777777777777777766 7777777777777777777777777765 66666655 77
Q ss_pred hHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 109 TPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 109 tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+.. +..+++++|.+..
T Consensus 126 t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~d~~g~t~L~~A~~~--~~~~~v~~Ll~~g 180 (253)
T 1yyh_A 126 TPLILAARLAVEGMLEDLINSHADV--NAVDDLGKSALHWAAAV--NNVDAAVVLLKNG 180 (253)
T ss_dssp CHHHHHHHHTCSSHHHHHHHTTCCT--TCBCTTSCBHHHHHHHH--TCHHHHHHHHHTT
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHc--CCHHHHHHHHHcC
Confidence 7777777777777777777777754 66777777777777743 3466777776653
No 47
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.92 E-value=8.7e-25 Score=170.86 Aligned_cols=132 Identities=18% Similarity=0.200 Sum_probs=113.6
Q ss_pred hhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCC
Q 028370 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGAC 106 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 106 (210)
+++.+|..|.||||+|+..|+.+++++|+++|++++.. +|+||||+|+..|+.+++++|++.|++++..+..
T Consensus 23 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~-- 94 (285)
T 3kea_A 23 DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL------ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDK-- 94 (285)
T ss_dssp TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC------TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTT--
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC--
Confidence 46788999999999999999999999999999888754 3789999999999999999999999999888776
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCC-CCcccccccchHHHHHHHHHhhhhhhcC
Q 028370 107 GWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRF-NPPLHYCPSLEWAYEEMMRFQRESFSAG 170 (210)
Q Consensus 107 g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g-~t~l~~a~~~~~~~~~~~~~l~~~~~~~ 170 (210)
|.||||+|+..|+.+++++|+++|+++ +..+..| .||||+|+.. +..+++++|.+.....
T Consensus 95 g~t~L~~A~~~g~~~~v~~Ll~~ga~~--~~~~~~g~~t~L~~A~~~--~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 95 GNTALYYAVDSGNMQTVKLFVKKNWRL--MFYGKTGWKTSFYHAVML--NDVSIVSYFLSEIPST 155 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHCGGG--GGCSSSGGGSHHHHHHHT--TCHHHHHHHHTTSCTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCC--CccCCCCCCCHHHHHHHc--CCHHHHHHHHhCCCcc
Confidence 899999999999999999999999965 7888888 7999999854 4478888888775443
No 48
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.92 E-value=2.6e-24 Score=159.25 Aligned_cols=148 Identities=24% Similarity=0.354 Sum_probs=125.2
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDV 90 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (210)
|....+.....+ ...+++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++
T Consensus 16 g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----~~~g~t~l~~A~~~~~~~~~~~ 90 (201)
T 3hra_A 16 RDTKKVKEILQD-TTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQ----NSISDSPYLYAGAQGRTEILAY 90 (201)
T ss_dssp TCHHHHHHHHTC-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHTTCHHHHHH
T ss_pred ccHHHHHHHHHc-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC----CCCCCCHHHHHHHcCCHHHHHH
Confidence 344444443332 23357788999999999999999999999999999999988 8999999999999999999999
Q ss_pred HH-HcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcC-CCCCCCCCCCCCCCcccccccchH---HHHHHHHHhhh
Q 028370 91 LL-ERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENG-AFLPDDINDSRFNPPLHYCPSLEW---AYEEMMRFQRE 165 (210)
Q Consensus 91 Ll-~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~g~t~l~~a~~~~~---~~~~~~~~l~~ 165 (210)
|+ ..+++++..+.. |.||||+|+..|+.+++++|+++| +++ +.++..|.||||+|+..+. ...+++++|.+
T Consensus 91 Ll~~~~~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~ 166 (201)
T 3hra_A 91 MLKHATPDLNKHNRY--GGNALIPAAEKGHIDNVKLLLEDGREDI--DFQNDFGYTALIEAVGLREGNQLYQDIVKLLME 166 (201)
T ss_dssp HHHHSCCCTTCCCTT--SCCSHHHHHHTTCHHHHHHHHHHCCCCT--TCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHH
T ss_pred HHhccCcccccccCC--CCcHHHHHHHcCCHHHHHHHHHcCCCCc--CCCCCCCCCHHHHHHHhccchhhHHHHHHHHHH
Confidence 99 567788888777 999999999999999999999999 754 8899999999999985432 34788888887
Q ss_pred hh
Q 028370 166 SF 167 (210)
Q Consensus 166 ~~ 167 (210)
..
T Consensus 167 ~g 168 (201)
T 3hra_A 167 NG 168 (201)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 49
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.92 E-value=7.1e-24 Score=160.70 Aligned_cols=131 Identities=28% Similarity=0.349 Sum_probs=90.7
Q ss_pred hhcccCCCCChHHHHHHHcCCHHHHHHHHHCC-CCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEG-MDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
+++.+|..|.||||+|+..|+.+++++|++.| .+++.. +..|.||||+|+..++.+++++|++.|++++..+..
T Consensus 69 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~----~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~- 143 (237)
T 3b7b_A 69 LVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQ----DDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNE- 143 (237)
T ss_dssp CCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-
T ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccC----CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCC-
Confidence 45556677777777777777777777777776 566655 666777777777777777777777777777666655
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+.. +..+++++|.+..
T Consensus 144 -g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g 200 (237)
T 3b7b_A 144 -ENICLHWAAFSGCVDIAEILLAAKCDL--HAVNIHGDSPLHIAARE--NRYDCVVLFLSRD 200 (237)
T ss_dssp -SCCHHHHHHHHCCHHHHHHHHTTTCCT--TCCCTTCCCHHHHHHHT--TCHHHHHHHHTTT
T ss_pred -CCCHHHHHHHCCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHh--CCHhHHHHHHHcC
Confidence 777777777777777777777777744 66677777777777643 3356666666553
No 50
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.92 E-value=1.1e-24 Score=175.52 Aligned_cols=126 Identities=21% Similarity=0.240 Sum_probs=117.9
Q ss_pred cCCCCChHHHHHHHcC--CHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCC-----CCcccC
Q 028370 31 TDDRGWTPLHIGARKG--DIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGAD-----IDARTK 103 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~g--~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~ 103 (210)
+|..|.||||+|+..| +.+++++|++.|++++.. +..|.||||+|+..|+.+++++|++.|++ ++..+.
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~----d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~ 209 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAK----DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANK 209 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCT
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCccc----CCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCC
Confidence 7889999999999999 999999999999999988 89999999999999999999999999998 888877
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 104 GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 104 ~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
. |.||||+|+..|+.+++++|+++|+++ +.+|..|.|||++|+.. +..+++++|.+.
T Consensus 210 ~--g~t~L~~A~~~g~~~~v~~Ll~~gad~--~~~d~~g~tpL~~A~~~--g~~~~v~~Ll~~ 266 (364)
T 3ljn_A 210 Q--GNSHLHWAILINWEDVAMRFVEMGIDV--NMEDNEHTVPLYLSVRA--AMVLLTKELLQK 266 (364)
T ss_dssp T--CCCTTHHHHTTTCHHHHHHHHTTTCCT--TCCCTTSCCHHHHHHHT--CCHHHHHHHHHH
T ss_pred C--CCcHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHh--ChHHHHHHHHHc
Confidence 7 999999999999999999999999966 89999999999999954 458899988886
No 51
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=7.9e-25 Score=167.49 Aligned_cols=127 Identities=31% Similarity=0.405 Sum_probs=114.2
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCccc-CCCCCCh
Q 028370 31 TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDART-KGACGWT 109 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~~~g~t 109 (210)
.+..|.||||+|++.|+.++++.|++ |++++.. +..|+||||+|+..|+.+++++|++.|++++..+ .. |.|
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~----d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~--g~t 113 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRDVDAV----DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG--GLT 113 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCB----CTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSS--CCC
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCc----CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCC--CCC
Confidence 44578999999999999999999999 9999988 8999999999999999999999999999999887 55 999
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccc--------------hHHHHHHHHHhhhh
Q 028370 110 PLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSL--------------EWAYEEMMRFQRES 166 (210)
Q Consensus 110 pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~--------------~~~~~~~~~~l~~~ 166 (210)
|||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.. ..+..+++++|.+.
T Consensus 114 ~L~~A~~~g~~~~v~~Ll~~ga~~--~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 114 ALHMAAGYVRPEVVEALVELGADI--EVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC--CCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 999999999999999999999966 88999999999999743 33567777777764
No 52
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.91 E-value=5.5e-24 Score=157.45 Aligned_cols=145 Identities=24% Similarity=0.362 Sum_probs=123.9
Q ss_pred chhHHHHHHhhHHH-------hhhhcccCCCCChHHHHHHHcCCHHHHHHHH-HCCCCccccccCCCCCCCcHHHHHHHC
Q 028370 11 GPFTLQRKASRKRF-------FRSVIDTDDRGWTPLHIGARKGDIKLVKQLL-DEGMDVNVAAWGPKSKGVTPLHLAAQG 82 (210)
Q Consensus 11 ~~~~~~~~~~~~~~-------~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~~~~g~t~L~~A~~~ 82 (210)
+|+..+.+...... ..+++.+|..|.||||+|+..|+.+++++|+ ..+++++.. +..|.||||+|+..
T Consensus 41 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~----~~~g~t~L~~A~~~ 116 (201)
T 3hra_A 41 TPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKH----NRYGGNALIPAAEK 116 (201)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCC----CTTSCCSHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccc----cCCCCcHHHHHHHc
Confidence 45555544433332 3456678899999999999999999999999 566788877 89999999999999
Q ss_pred CcHHHHHHHHHcC-CCCCcccCCCCCChHHHHHHhcCC-----HHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHH
Q 028370 83 GHLEVMDVLLERG-ADIDARTKGACGWTPLHTAAKERK-----KEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAY 156 (210)
Q Consensus 83 ~~~~~v~~Ll~~g-~~~~~~~~~~~g~tpL~~A~~~g~-----~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~ 156 (210)
|+.+++++|++.| ++++..+.. |.||||+|+..++ .+++++|+++|+++ +.+|..|.||+++|+. .+.
T Consensus 117 ~~~~~v~~Ll~~g~~~~~~~~~~--g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t~l~~A~~--~~~ 190 (201)
T 3hra_A 117 GHIDNVKLLLEDGREDIDFQNDF--GYTALIEAVGLREGNQLYQDIVKLLMENGADQ--SIKDNSGRTAMDYANQ--KGY 190 (201)
T ss_dssp TCHHHHHHHHHHCCCCTTCCCTT--SCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHH--HTC
T ss_pred CCHHHHHHHHHcCCCCcCCCCCC--CCCHHHHHHHhccchhhHHHHHHHHHHCCCCC--CccCCCCCCHHHHHHH--cCC
Confidence 9999999999998 899988877 9999999999988 99999999999966 8899999999999994 455
Q ss_pred HHHHHHhhh
Q 028370 157 EEMMRFQRE 165 (210)
Q Consensus 157 ~~~~~~l~~ 165 (210)
.+++++|.+
T Consensus 191 ~~~~~~Ll~ 199 (201)
T 3hra_A 191 TEISKILAQ 199 (201)
T ss_dssp HHHHHHHHT
T ss_pred HhHHHHHHh
Confidence 788888765
No 53
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.91 E-value=1.3e-24 Score=155.71 Aligned_cols=125 Identities=26% Similarity=0.369 Sum_probs=114.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHH
Q 028370 34 RGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHT 113 (210)
Q Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~ 113 (210)
...||||.|+..|+.+++++|+++|++++.. +..|.||||+|+. |+.+++++|++.|++++..+.. |.||||+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~----~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~ 76 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQ----NGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRT--GFAVIHD 76 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCC----CTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTT--SCCHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCcccc----CccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCC--CCCHHHH
Confidence 4569999999999999999999999999888 8999999999999 9999999999999999988877 9999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 114 AAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 114 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
|+..|+.+++++|+++|+++ +.++..|.||||+|+.. +..+++++|.+....
T Consensus 77 A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g~~ 128 (162)
T 1ihb_A 77 AARAGFLDTLQTLLEFQADV--NIEDNEGNLPLHLAAKE--GHLRVVEFLVKHTAS 128 (162)
T ss_dssp HHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHT--TCHHHHHHHHHHSCC
T ss_pred HHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHc--CCHHHHHHHHHccCC
Confidence 99999999999999999965 88999999999999954 457899998887554
No 54
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.91 E-value=4.9e-24 Score=139.13 Aligned_cols=93 Identities=54% Similarity=0.900 Sum_probs=87.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHH
Q 028370 34 RGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHT 113 (210)
Q Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~ 113 (210)
+|+||||+|+..|+.+++++|++.|++++.. |..|.||||+|+..|+.+++++|++.|++++..+.+ |.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~----d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~--g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAK----DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN--GRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCccc----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC--CCCHHHH
Confidence 4899999999999999999999999999988 899999999999999999999999999999998877 9999999
Q ss_pred HHhcCCHHHHHHHHHcCCC
Q 028370 114 AAKERKKEAVRFLIENGAF 132 (210)
Q Consensus 114 A~~~g~~~~v~~Ll~~g~~ 132 (210)
|+..|+.+++++|+++|++
T Consensus 75 A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999983
No 55
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.91 E-value=9.1e-24 Score=165.04 Aligned_cols=129 Identities=28% Similarity=0.341 Sum_probs=87.9
Q ss_pred hhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCC
Q 028370 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGAC 106 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 106 (210)
+++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.|++++..+ +
T Consensus 84 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~-- 156 (285)
T 3d9h_A 84 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGV----TADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-D-- 156 (285)
T ss_dssp CSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCC----CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-T--
T ss_pred CCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-C--
Confidence 34556667777777777777777777777777777666 6667777777777777777777777776665432 2
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 107 GWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 107 g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|.||||+|+..|+.+++++|+++|+++ +.++..|.|||++|+.. +..+++++|.+.
T Consensus 157 g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~d~~g~t~L~~A~~~--~~~~~v~~Ll~~ 212 (285)
T 3d9h_A 157 LASPIHEAARRGHVECVNSLIAYGGNI--DHKISHLGTPLYLACEN--QQRACVKKLLES 212 (285)
T ss_dssp TSCHHHHHHHHTCHHHHHHHHHTTCCT--TCCBTTTBCHHHHHHHT--TCHHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHc--CcHHHHHHHHHC
Confidence 667777777777777777777777744 66677777777777743 335666666655
No 56
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.91 E-value=4.9e-24 Score=165.25 Aligned_cols=119 Identities=33% Similarity=0.413 Sum_probs=99.4
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCC-CCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKS-KGVTPLHLAAQGGHLEVMDVLLERGADIDARTKG 104 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 104 (210)
.+++.+|..|.||||+|+..|+.+++++|+++|++++.. +. .|.||||+|+..|+.+++++|+++|++++.++..
T Consensus 149 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~ 224 (282)
T 1oy3_D 149 LQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKP----EPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYG 224 (282)
T ss_dssp GGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCC----CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred hcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCC----CCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Confidence 346778999999999999999999999999999999987 54 5999999999999999999999999999999877
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccc
Q 028370 105 ACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSL 152 (210)
Q Consensus 105 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~ 152 (210)
|.||||+|+..|+.+++++|+++|+++ +.++..|.||+++|.+.
T Consensus 225 --g~tpL~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~tpl~~a~~~ 268 (282)
T 1oy3_D 225 --GRTPLGSALLRPNPILARLLRAHGAPE--PEDGGDKLSPCSSSGSD 268 (282)
T ss_dssp --SCCHHHHHHTSSCHHHHHHHHHTTCCC--CCCC-------------
T ss_pred --CCCHHHHHHHcCCcHHHHHHHHcCCCc--CcCCCcccccccccCCc
Confidence 999999999999999999999999966 89999999999999843
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.91 E-value=2.1e-24 Score=167.94 Aligned_cols=131 Identities=24% Similarity=0.319 Sum_probs=119.6
Q ss_pred hhcccCCCCChHHHHHH-----HcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcc
Q 028370 27 SVIDTDDRGWTPLHIGA-----RKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDAR 101 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~-----~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 101 (210)
+++.+|..|.||||+|+ ..++.++++.|++.|.+.+.. +..|.||||+|+..|+.+++++|++.|++++.+
T Consensus 137 ~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~----~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~ 212 (276)
T 4hbd_A 137 KVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKA----SQAGQTALMLAVSHGRVDVVKALLACEADVNVQ 212 (276)
T ss_dssp CTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCC----TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCcccc----CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC
Confidence 56778889999999999 678999999999999888777 888999999999999999999999999999999
Q ss_pred cCCCCCChHHHHHHhcCCHHHHHHHHH-cCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 102 TKGACGWTPLHTAAKERKKEAVRFLIE-NGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 102 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
+.. |.||||+|+..|+.+++++|++ .|+++ +.+|..|.|||++|+. .+..+++++|.+..
T Consensus 213 d~~--G~TpLh~A~~~g~~~iv~~Ll~~~gad~--~~~d~~g~TpL~~A~~--~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 213 DDD--GSTALMCACEHGHKEIAGLLLAVPSCDI--SLTDRDGSTALMVALD--AGQSEIASMLYSRM 273 (276)
T ss_dssp CTT--SCCHHHHHHHHTCHHHHHHHHTSTTCCT--TCCCTTSCCHHHHHHH--HTCHHHHHHHHHHC
T ss_pred CCC--CCCHHHHHHHCCCHHHHHHHHhcCCCCC--cCcCCCCCCHHHHHHH--cCCHHHHHHHHhcc
Confidence 887 9999999999999999999999 89965 8899999999999994 45588998888764
No 58
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.91 E-value=1e-24 Score=167.47 Aligned_cols=140 Identities=26% Similarity=0.249 Sum_probs=116.8
Q ss_pred hhhcc----cCCCCChHHHHHHHc---CCHHHHHHHHHCCCCccccc-------cCCCCCCCcHHHHHHHCCcHHHHHHH
Q 028370 26 RSVID----TDDRGWTPLHIGARK---GDIKLVKQLLDEGMDVNVAA-------WGPKSKGVTPLHLAAQGGHLEVMDVL 91 (210)
Q Consensus 26 ~~~~~----~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~-------~~~~~~g~t~L~~A~~~~~~~~v~~L 91 (210)
.+++. +|..|+||||+|+.. |+.+++++|++.|++++... ...+..|.||||+|+..|+.+++++|
T Consensus 30 ~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~L 109 (256)
T 2etb_A 30 KYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLL 109 (256)
T ss_dssp CCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHH
T ss_pred CCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHH
Confidence 34555 799999999999999 99999999999987765320 01146799999999999999999999
Q ss_pred HHcCCCCCcccCC-----------CCCChHHHHHHhcCCHHHHHHHHH---cCCCCCCCCCCCCCCCcccccccchHHHH
Q 028370 92 LERGADIDARTKG-----------ACGWTPLHTAAKERKKEAVRFLIE---NGAFLPDDINDSRFNPPLHYCPSLEWAYE 157 (210)
Q Consensus 92 l~~g~~~~~~~~~-----------~~g~tpL~~A~~~g~~~~v~~Ll~---~g~~~~~~~~~~~g~t~l~~a~~~~~~~~ 157 (210)
++.|++++..+.. ..|.||||+|+..|+.+++++|++ +|+++ +.+|..|.||||+|+..+.+..
T Consensus 110 l~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~--n~~d~~g~TpLh~A~~~~~~~~ 187 (256)
T 2etb_A 110 VENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL--EATDSLGNTVLHALVMIADNSP 187 (256)
T ss_dssp HHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT--TCCCTTSCCHHHHHHHHCCSCH
T ss_pred HHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc--CccCCCCCCHHHHHHHcccCCc
Confidence 9999999987652 138999999999999999999999 89966 8999999999999996333344
Q ss_pred H-------HHHHhhhhh
Q 028370 158 E-------MMRFQRESF 167 (210)
Q Consensus 158 ~-------~~~~l~~~~ 167 (210)
+ ++++|.+..
T Consensus 188 ~~~~~~~~iv~~Ll~~g 204 (256)
T 2etb_A 188 ENSALVIHMYDGLLQMG 204 (256)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHcC
Confidence 5 778877763
No 59
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.91 E-value=4.7e-24 Score=151.63 Aligned_cols=122 Identities=34% Similarity=0.404 Sum_probs=111.4
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHH
Q 028370 35 GWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTA 114 (210)
Q Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A 114 (210)
..|+|+.|++.|+.+++++|++.|++++ . +..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~A 74 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-T----DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKV--DRTPLHMA 74 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-C----CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTT--CCCHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-c----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC--CCCHHHHH
Confidence 4689999999999999999999999875 3 788999999999999999999999999999988877 99999999
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 115 AKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 115 ~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
+..|+.+++++|+++|+++ +.+|..|.||||+|+.. +..+++++|.+..
T Consensus 75 ~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g 123 (153)
T 1awc_B 75 ASEGHANIVEVLLKHGADV--NAKDMLKMTALHWATEH--NHQEVVELLIKYG 123 (153)
T ss_dssp HHHTCHHHHHHHHTTTCCT--TCCCTTSCCHHHHHHHT--TCHHHHHHHHHTT
T ss_pred HHcChHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHc--CCHHHHHHHHHcC
Confidence 9999999999999999966 88999999999999954 4578999888764
No 60
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.91 E-value=1.7e-24 Score=164.36 Aligned_cols=131 Identities=24% Similarity=0.307 Sum_probs=116.9
Q ss_pred hhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCC------Cc
Q 028370 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADI------DA 100 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------~~ 100 (210)
+++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.|+++ +.
T Consensus 37 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 112 (236)
T 1ikn_D 37 FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELR----DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKA 112 (236)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCC----CTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGC
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc----CCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhc
Confidence 46778999999999999999999999999999999988 899999999999999999999999998763 34
Q ss_pred ccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCC-CCCCcccccccchHHHHHHHHHhhhhh
Q 028370 101 RTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDS-RFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 101 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
.+.. |.||||+|+..|+.+++++|+++|+++ +.++. .|.||||+|+.. +..+++++|.+..
T Consensus 113 ~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~~g~tpL~~A~~~--~~~~~v~~Ll~~g 174 (236)
T 1ikn_D 113 TNYN--GHTCLHLASIHGYLGIVELLVSLGADV--NAQEPCNGRTALHLAVDL--QNPDLVSLLLKCG 174 (236)
T ss_dssp CCTT--CCCHHHHHHHTTCHHHHHHHHHHTCCT--TCCCTTTCCCHHHHHHHT--TCHHHHHHHHTTT
T ss_pred cCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCCCCCCHHHHHHHc--CCHHHHHHHHHcC
Confidence 4444 999999999999999999999999966 77777 999999999954 4578999998763
No 61
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.91 E-value=2.7e-23 Score=157.72 Aligned_cols=133 Identities=26% Similarity=0.299 Sum_probs=113.9
Q ss_pred hhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCC----CCCc
Q 028370 25 FRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGA----DIDA 100 (210)
Q Consensus 25 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~ 100 (210)
..+++.+|..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..++.+++++|++.++ +++.
T Consensus 36 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~ 111 (241)
T 1k1a_A 36 GRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMAL----DRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEA 111 (241)
T ss_dssp TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTC
T ss_pred CCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCcccc----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccc
Confidence 3456778889999999999999999999999999999887 8899999999999999999999999887 6666
Q ss_pred ccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCC-CCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 101 RTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDIND-SRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 101 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
.+.. |.||||+|+..|+.+++++|+++|+++ +..+ ..|.||||+|+.. +..+++++|.+..
T Consensus 112 ~~~~--g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g 173 (241)
T 1k1a_A 112 RNYD--GLTALHVAVNTECQETVQLLLERGADI--DAVDIKSGRSPLIHAVEN--NSLSMVQLLLQHG 173 (241)
T ss_dssp CCTT--SCCHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTTCCCHHHHHHHT--TCHHHHHHHHHTT
T ss_pred cCcC--CCcHHHHHHHcCCHHHHHHHHHcCCCc--ccccccCCCcHHHHHHHc--CCHHHHHHHHHcC
Confidence 6665 899999999999999999999999965 6666 7889999999854 4478888888763
No 62
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.91 E-value=1.5e-23 Score=163.88 Aligned_cols=132 Identities=27% Similarity=0.446 Sum_probs=118.5
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
..++.+|..|+||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+++++|++.|++++..+..
T Consensus 50 ~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~- 124 (285)
T 3d9h_A 50 NPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNII----TADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTAD- 124 (285)
T ss_dssp CTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEE----CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTT-
T ss_pred CcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc----CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCC-
Confidence 345678999999999999999999999999999999988 899999999999999999999999999999988877
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
|.||||+|+..|+.+++++|+++|+++ +. +..|.|||++|+. .+..+++++|.+...
T Consensus 125 -g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~-~~~g~t~L~~A~~--~g~~~~v~~Ll~~g~ 181 (285)
T 3d9h_A 125 -WHTPLFNACVSGSWDCVNLLLQHGASV--QP-ESDLASPIHEAAR--RGHVECVNSLIAYGG 181 (285)
T ss_dssp -CCCHHHHHHHHTCHHHHHHHHHTTCCS--SC-SCTTSCHHHHHHH--HTCHHHHHHHHHTTC
T ss_pred -CCCHHHHHHHcCHHHHHHHHHHCCCCC--CC-CCCCCCHHHHHHH--cCCHHHHHHHHHCCC
Confidence 999999999999999999999999976 43 3459999999994 445788888887643
No 63
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.91 E-value=1.6e-23 Score=158.73 Aligned_cols=133 Identities=29% Similarity=0.466 Sum_probs=114.7
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcC-CCCCcccCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERG-ADIDARTKG 104 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~ 104 (210)
.+++..|..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+++++|++.| .+++..+..
T Consensus 35 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~ 110 (237)
T 3b7b_A 35 ANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPK----DAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDG 110 (237)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCC----CTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTT
T ss_pred CCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCC----CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCC
Confidence 345677888999999999999999999999999988877 888999999999999999999999988 778777766
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 105 ACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 105 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
|.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+.. +..+++++|.+...
T Consensus 111 --g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~g~t~L~~A~~~--~~~~~~~~Ll~~g~ 168 (237)
T 3b7b_A 111 --GWTPMIWATEYKHVDLVKLLLSKGSDI--NIRDNEENICLHWAAFS--GCVDIAEILLAAKC 168 (237)
T ss_dssp --SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHH--CCHHHHHHHHTTTC
T ss_pred --CCCHHHHHHHcCCHHHHHHHHHCCCCC--CccCCCCCCHHHHHHHC--CCHHHHHHHHHcCC
Confidence 899999999999999999999999965 88889999999999844 45788888887643
No 64
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.91 E-value=4.6e-24 Score=153.39 Aligned_cols=127 Identities=28% Similarity=0.420 Sum_probs=112.6
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHCC-CCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCCh
Q 028370 31 TDDRGWTPLHIGARKGDIKLVKQLLDEG-MDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWT 109 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~t 109 (210)
.|..|.|+||.|++.|+.++++.|++.+ .+++.. +..|.||||+|+..|+.+++++|++.|++++..+.. |.|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t 77 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDI----EGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKG--GLV 77 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCT----TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCC
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCcccc----ccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCC--CCC
Confidence 5778899999999999999999999854 455555 788999999999999999999999999999988887 999
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 110 PLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 110 pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
|||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..+ ..+++++|.+..
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~g 131 (165)
T 3twr_A 78 PLHNACSYGHYEVAELLVKHGAVV--NVADLWKFTPLHEAAAKG--KYEICKLLLQHG 131 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTCCCHHHHHHHTT--CHHHHHHHHHTT
T ss_pred HHHHHHHcCcHHHHHHHHhCCCCC--CCcCCCCCCHHHHHHHcC--CHHHHHHHHHcC
Confidence 999999999999999999999966 889999999999999544 578888888763
No 65
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.91 E-value=1e-23 Score=153.67 Aligned_cols=126 Identities=27% Similarity=0.383 Sum_probs=111.6
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHC-CCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHH
Q 028370 33 DRGWTPLHIGARKGDIKLVKQLLDE-GMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPL 111 (210)
Q Consensus 33 ~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL 111 (210)
..+.++||.|+..|+.++++.|++. +.+++.. +..|.||||+|+..|+.+++++|++.|++++..+.. |.|||
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L 76 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQG----DDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRG--DDTPL 76 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--CCCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCccccccc----CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC--CCCHH
Confidence 4578999999999999999999998 5677777 899999999999999999999999999999998877 99999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 112 HTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 112 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
|+|+..|+.+++++|+++|+++ +..|..|.||||+|+..+ ..+++++|.+...
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g~~~--~~~d~~g~t~L~~A~~~~--~~~~v~~Ll~~ga 129 (179)
T 3f6q_A 77 HLAASHGHRDIVQKLLQYKADI--NAVNEHGNVPLHYACFWG--QDQVAEDLVANGA 129 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHTT--CHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCC--CccCCCCCCHHHHHHHcC--CHHHHHHHHHCCC
Confidence 9999999999999999999966 889999999999999554 4788998887643
No 66
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.90 E-value=8.8e-24 Score=152.89 Aligned_cols=123 Identities=26% Similarity=0.283 Sum_probs=111.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCC-ccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHH
Q 028370 35 GWTPLHIGARKGDIKLVKQLLDEGMD-VNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHT 113 (210)
Q Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~ 113 (210)
+.||||.|+..|+.++++.|++.+.+ ++.. +..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~ 75 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKP----DERGFTPLIWASAFGEIETVRFLLEWGADPHILAKE--RESALSL 75 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCC----CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT--CCCHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCC----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhccc--CCCHHHH
Confidence 46899999999999999999999876 5666 889999999999999999999999999999998877 9999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 114 AAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 114 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
|+..|+.+++++|+++|+++ +.++..|.||||+|+.. +..+++++|.+..
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~g 125 (172)
T 3v30_A 76 ASTGGYTDIVGLLLERDVDI--NIYDWNGGTPLLYAVRG--NHVKCVEALLARG 125 (172)
T ss_dssp HHHTTCHHHHHHHHTTTCCT--TCCCTTSCCHHHHHHHT--TCHHHHHHHHHTT
T ss_pred HHHCCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHc--CCHHHHHHHHHcC
Confidence 99999999999999999966 88999999999999954 4578899888764
No 67
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.90 E-value=1.4e-23 Score=172.79 Aligned_cols=128 Identities=33% Similarity=0.402 Sum_probs=75.9
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCC
Q 028370 29 IDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGW 108 (210)
Q Consensus 29 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~ 108 (210)
+..|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++|++++..+.. |.
T Consensus 41 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~--g~ 114 (437)
T 1n11_A 41 NVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAK----AKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTA--GH 114 (437)
T ss_dssp CCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCC----CTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTT--CC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC----CCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCC--CC
Confidence 445555666666666666666666666666666555 555666666666666666666666666666555554 66
Q ss_pred hHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 109 TPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 109 tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
||||+|+..|+.+++++|++++++. ...+..|.|||++|+..+ ..+++++|.+.
T Consensus 115 t~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~ 168 (437)
T 1n11_A 115 TPLHIAAREGHVETVLALLEKEASQ--ACMTKKGFTPLHVAAKYG--KVRVAELLLER 168 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCS--CCCCTTSCCHHHHHHHTT--CHHHHHHHHHT
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCC--cCCCCCCCCHHHHHHHcC--CHHHHHHHHhC
Confidence 6666666666666666666666533 455556666666665332 34555555544
No 68
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.90 E-value=6.2e-23 Score=158.21 Aligned_cols=129 Identities=29% Similarity=0.384 Sum_probs=82.3
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
.+++.+|..|.||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+.+++++|++.|++++..+..
T Consensus 60 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~- 133 (261)
T 2xai_A 60 AQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-----ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISH- 133 (261)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-----SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTT-
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCC-
Confidence 34555666777777777777777777777777766653 234666666666666666666666666666666555
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|.||||+|+..|+.+++++|+++|+++ + .+..|.||||+|+. .+..+++++|.+.
T Consensus 134 -g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~-~~~~g~t~Lh~A~~--~~~~~~v~~Ll~~ 188 (261)
T 2xai_A 134 -LGTPLYLACENQQRACVKKLLESGADV--N-QGKGQDSPLHAVAR--TASEELACLLMDF 188 (261)
T ss_dssp -TBCHHHHHHHTTCHHHHHHHHHHTCCT--T-CCBTTBCHHHHHHH--HTCHHHHHHHHHT
T ss_pred -CCCHHHHHHHhCCHHHHHHHHHcCCCC--C-CCCCCCChHHHHHH--cCCHHHHHHHHHc
Confidence 666666666666666666666666654 2 25566666666663 2335666666554
No 69
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.90 E-value=1.2e-23 Score=149.68 Aligned_cols=121 Identities=23% Similarity=0.334 Sum_probs=110.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHC-CCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHH
Q 028370 35 GWTPLHIGARKGDIKLVKQLLDE-GMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHT 113 (210)
Q Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~ 113 (210)
+.|+||.|+..|+.++++.|++. +.+++.. +..|.||||+ +..|+.+++++|++.|++++..+.. |.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~----~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~--g~t~L~~ 74 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDAL----NRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTS--GTSPVHD 74 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCC----CTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCcccc----CCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCC--CCCHHHH
Confidence 56999999999999999999998 3477777 8999999999 9999999999999999999998877 9999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 114 AAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 114 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|+..|+.+++++|+++|+++ +.+|..|.||||+|+. .+..+++++|.+.
T Consensus 75 A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~L~~A~~--~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 75 AARTGFLDTLKVLVEHGADV--NVPDGTGALPIHLAVQ--EGHTAVVSFLAAE 123 (156)
T ss_dssp HHHTTCHHHHHHHHHTTCCS--CCCCTTSCCHHHHHHH--HTCHHHHHHHHTT
T ss_pred HHHcCcHHHHHHHHHcCCCC--CCcCCCCCcHHHHHHH--hChHHHHHHHHhc
Confidence 99999999999999999965 8899999999999994 4458899998877
No 70
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.90 E-value=2.1e-23 Score=171.66 Aligned_cols=131 Identities=33% Similarity=0.516 Sum_probs=96.6
Q ss_pred hhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCC
Q 028370 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGAC 106 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 106 (210)
+++.++..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 237 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~----~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-- 310 (437)
T 1n11_A 237 SANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLG----NKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRM-- 310 (437)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC----CTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSS--
T ss_pred CCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCC--
Confidence 34556777777777777777777777777777777766 777777777777777777777777777777776666
Q ss_pred CChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 107 GWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 107 g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
|.||||+|+..|+.+++++|+++|+++ +.++..|.||||+|+.. +..+++++|.+..
T Consensus 311 g~t~L~~A~~~g~~~~v~~Ll~~gad~--n~~~~~g~t~L~~A~~~--g~~~iv~~Ll~~g 367 (437)
T 1n11_A 311 GYTPLHVASHYGNIKLVKFLLQHQADV--NAKTKLGYSPLHQAAQQ--GHTDIVTLLLKNG 367 (437)
T ss_dssp CCCHHHHHHHSSCSHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHT--TCHHHHHHHHHTT
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCCC--CCCCCCCCCHHHHHHHC--ChHHHHHHHHHCc
Confidence 777777777777777777777777754 67777777777777743 3467777777653
No 71
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.90 E-value=6.7e-23 Score=163.32 Aligned_cols=68 Identities=37% Similarity=0.484 Sum_probs=40.6
Q ss_pred hhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCC
Q 028370 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADI 98 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 98 (210)
+++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++|+++
T Consensus 83 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 150 (351)
T 3utm_A 83 DVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAM----DLWQFTPLHEAASKNRVEVCSLLLSHGADP 150 (351)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 34445566666666666666666666666666666555 555666666666666655555555555443
No 72
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.90 E-value=3e-23 Score=165.18 Aligned_cols=134 Identities=18% Similarity=0.118 Sum_probs=111.0
Q ss_pred hhhcc-cCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCc---HHHHHHHHHcC-CCCCc
Q 028370 26 RSVID-TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGH---LEVMDVLLERG-ADIDA 100 (210)
Q Consensus 26 ~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~---~~~v~~Ll~~g-~~~~~ 100 (210)
.+++. +|..|+||||+|+..|+.+++++|+++|++++.. +..|+||||+|+..|+ .++++.|++.+ ++++.
T Consensus 121 ~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~----d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~ 196 (327)
T 1sw6_A 121 LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYG----DNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL 196 (327)
T ss_dssp CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBC----CTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGE
T ss_pred CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCc----CCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccC
Confidence 45666 7999999999999999999999999999999988 8999999999999988 57777777765 66777
Q ss_pred ccCCCCCChHHHHHHh----cCCHHHHHHHHHcCC--------------------CC-----------------------
Q 028370 101 RTKGACGWTPLHTAAK----ERKKEAVRFLIENGA--------------------FL----------------------- 133 (210)
Q Consensus 101 ~~~~~~g~tpL~~A~~----~g~~~~v~~Ll~~g~--------------------~~----------------------- 133 (210)
.+.. |.||||+|+. .|+.+++++|++.++ ++
T Consensus 197 ~d~~--g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~ 274 (327)
T 1sw6_A 197 EDSM--NRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIAN 274 (327)
T ss_dssp ECTT--CCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHH
T ss_pred CCCC--CCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHh
Confidence 7766 8999999998 888999999887732 11
Q ss_pred CCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 134 PDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 134 ~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
+.+.+|..|.||||+|+.. +..+++++|.+..
T Consensus 275 ~~n~~d~~G~TpLh~A~~~--g~~~~v~~Ll~~G 306 (327)
T 1sw6_A 275 MLNAQDSNGDTCLNIAARL--GNISIVDALLDYG 306 (327)
T ss_dssp TTTCCCTTSCCHHHHHHHH--CCHHHHHHHHHTT
T ss_pred CCCCCCCCCCCHHHHHHHc--CCHHHHHHHHHcC
Confidence 2478888999999999844 4578888888763
No 73
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.90 E-value=8.8e-24 Score=163.78 Aligned_cols=135 Identities=27% Similarity=0.258 Sum_probs=111.9
Q ss_pred cCCCCChHHHHHHHc---CCHHHHHHHHHCCCCc-------cccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCc
Q 028370 31 TDDRGWTPLHIGARK---GDIKLVKQLLDEGMDV-------NVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDA 100 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~-------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 100 (210)
.|..|.||||+|+.. |+.+++++|++.|+++ +......+..|.||||+|+..|+.+++++|++.|++++.
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 588999999999987 9999999999998653 221111267899999999999999999999999999998
Q ss_pred ccCC------------CCCChHHHHHHhcCCHHHHHHHHH---cCCCCCCCCCCCCCCCcccccccchHH-------HHH
Q 028370 101 RTKG------------ACGWTPLHTAAKERKKEAVRFLIE---NGAFLPDDINDSRFNPPLHYCPSLEWA-------YEE 158 (210)
Q Consensus 101 ~~~~------------~~g~tpL~~A~~~g~~~~v~~Ll~---~g~~~~~~~~~~~g~t~l~~a~~~~~~-------~~~ 158 (210)
.+.. ..|.||||+|+..|+.+++++|++ +|+++ +.+|..|.||||+|+..+.. ..+
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~--~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~ 207 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI--SARDSVGNTVLHALVEVADNTVDNTKFVTS 207 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT--TCCCTTSCCHHHHHHHHCCSCHHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc--eeeCCCCCcHHHHHHHccCcchhHHHHHHH
Confidence 8761 129999999999999999999999 89965 89999999999999854321 146
Q ss_pred HHHHhhhhh
Q 028370 159 MMRFQRESF 167 (210)
Q Consensus 159 ~~~~l~~~~ 167 (210)
++++|.+..
T Consensus 208 ~v~~Ll~~g 216 (273)
T 2pnn_A 208 MYNEILILG 216 (273)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 677777653
No 74
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.90 E-value=4.5e-24 Score=144.60 Aligned_cols=109 Identities=41% Similarity=0.587 Sum_probs=100.6
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCCh
Q 028370 30 DTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWT 109 (210)
Q Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~t 109 (210)
.+|..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..++.+++++|++.|++++..+.. |.|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~----d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~--g~t 77 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNAR----SKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKD--GNT 77 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCC----CSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTT--CCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc----CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCC--CCC
Confidence 58999999999999999999999999999999988 899999999999999999999999999999988877 999
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcc
Q 028370 110 PLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPL 146 (210)
Q Consensus 110 pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l 146 (210)
|||+|+..|+.+++++|+++|+++ +.++..|.+|-
T Consensus 78 pl~~A~~~~~~~~~~~Ll~~ga~~--n~~~~~~~~~~ 112 (115)
T 2l6b_A 78 PEHLAKKNGHHEIVKLLDAKGADV--NARSWGSSHHH 112 (115)
T ss_dssp TTHHHHTTTCHHHHHHHHTTSSSH--HHHSCCCC---
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCC--CcCCccccccc
Confidence 999999999999999999999966 77888888774
No 75
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.90 E-value=5e-23 Score=161.18 Aligned_cols=125 Identities=29% Similarity=0.458 Sum_probs=113.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHH
Q 028370 32 DDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPL 111 (210)
Q Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL 111 (210)
+..|.||||.|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+++++|++.|++++..+.. |.|||
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~--g~tpL 110 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGADINYA----NVDGLTALHQACIDDNVDMVKFLVENGANINQPDNE--GWIPL 110 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCB----CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCCCccc----CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC--CCcHH
Confidence 346789999999999999999999999999988 899999999999999999999999999999988877 99999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 112 HTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 112 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|+|+..|+.+++++|+++|+++ +..+..|.|||++|+. .+..++++.+...
T Consensus 111 ~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~g~t~l~~A~~--~~~~~~~~~ll~~ 161 (299)
T 1s70_B 111 HAAASCGYLDIAEYLISQGAHV--GAVNSEGDTPLDIAEE--EAMEELLQNEVNR 161 (299)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHCCS--HHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCC--CCcCCCCCCHHHHHHh--cchHHHHHHHHhh
Confidence 9999999999999999999965 8899999999999984 4556777666544
No 76
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.90 E-value=3.7e-23 Score=166.47 Aligned_cols=138 Identities=26% Similarity=0.276 Sum_probs=110.7
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCcccccc---------------------------------------
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAW--------------------------------------- 66 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~--------------------------------------- 66 (210)
.+++.+|..|.||||+|+..|+.+++++|++.|++++....
T Consensus 44 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 123 (364)
T 3ljn_A 44 VSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDE 123 (364)
T ss_dssp CCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCC
T ss_pred CCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcch
Confidence 34566777788888888888888888888777765543100
Q ss_pred ---------CCCCCCCcHHHHHHHCC--cHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCC---
Q 028370 67 ---------GPKSKGVTPLHLAAQGG--HLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAF--- 132 (210)
Q Consensus 67 ---------~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~--- 132 (210)
..+..|.||||+|+..| +.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++
T Consensus 124 ~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~--g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 201 (364)
T 3ljn_A 124 REVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKA--DETPLMRAMEFRNREALDLMMDTVPSKSS 201 (364)
T ss_dssp CCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHHCSCSSS
T ss_pred HhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCC--CCCHHHHHHHcCCHHHHHHHHhccccccc
Confidence 01567899999999999 999999999999999988877 99999999999999999999999986
Q ss_pred CCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 133 LPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 133 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
++.+..+..|.||||+|+.. +..+++++|.+..
T Consensus 202 ~~~~~~~~~g~t~L~~A~~~--g~~~~v~~Ll~~g 234 (364)
T 3ljn_A 202 LRLDYANKQGNSHLHWAILI--NWEDVAMRFVEMG 234 (364)
T ss_dssp CCTTCCCTTCCCTTHHHHTT--TCHHHHHHHHTTT
T ss_pred ccccccCCCCCcHHHHHHHc--CCHHHHHHHHHcC
Confidence 01388899999999999954 4578999888764
No 77
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.90 E-value=7.6e-23 Score=158.40 Aligned_cols=130 Identities=28% Similarity=0.433 Sum_probs=105.1
Q ss_pred hhccc-CCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 27 SVIDT-DDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 27 ~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
+++.+ +..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.|++++..+..
T Consensus 30 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~- 104 (285)
T 1wdy_A 30 NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLR----KKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFY- 104 (285)
T ss_dssp CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTT-
T ss_pred CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccc----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcc-
Confidence 34444 677888888888888888888888888888877 788888888888888888888888888888877766
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCC----------CCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDIN----------DSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~----------~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|.||||+|+..|+.+++++|+++|+++ +.. +..|.|||++|+. .+..++++++.+.
T Consensus 105 -g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~~~~~~~~~~~~~~g~t~L~~A~~--~~~~~~v~~Ll~~ 170 (285)
T 1wdy_A 105 -GFTAFMEAAVYGKVKALKFLYKRGANV--NLRRKTKEDQERLRKGGATALMDAAE--KGHVEVLKILLDE 170 (285)
T ss_dssp -CCBHHHHHHHTTCHHHHHHHHHTTCCT--TCCCCCCHHHHHTTCCCCCHHHHHHH--HTCHHHHHHHHHT
T ss_pred -cCCHHHHHHHhCCHHHHHHHHHhCCCc--ccccccHHHHHhhccCCCcHHHHHHH--cCCHHHHHHHHHh
Confidence 888888888888888888888888865 444 6778888888884 3446777777765
No 78
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.89 E-value=1.2e-22 Score=157.36 Aligned_cols=126 Identities=29% Similarity=0.360 Sum_probs=108.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHC-CCCccccccCCCCCCCcHHHHHHHCCc----HHHHHHHHHcCCCCCcccCCCC
Q 028370 32 DDRGWTPLHIGARKGDIKLVKQLLDE-GMDVNVAAWGPKSKGVTPLHLAAQGGH----LEVMDVLLERGADIDARTKGAC 106 (210)
Q Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~~~~~~~~~~~ 106 (210)
+..|.||||+|+..|+.+++++|++. |++++.. +..|.||||+|+..++ .+++++|++.|++++..+..
T Consensus 145 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~----~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~-- 218 (285)
T 1wdy_A 145 RKGGATALMDAAEKGHVEVLKILLDEMGADVNAC----DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER-- 218 (285)
T ss_dssp TCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCC----CTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTT--
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCcc----CCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCC--
Confidence 67788999999999999999999987 8888877 8889999999999888 88999999999998888777
Q ss_pred CChHHHHHHhcCCHHHHHHHHH-cCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 107 GWTPLHTAAKERKKEAVRFLIE-NGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 107 g~tpL~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
|.||||+|+..|+.+++++|++ .|+++ +.+|..|.|||++|+.. +..+++++|.+..
T Consensus 219 g~t~L~~A~~~~~~~~v~~Ll~~~g~~~--~~~~~~g~t~l~~A~~~--~~~~i~~~Ll~~G 276 (285)
T 1wdy_A 219 GKTPLILAVEKKHLGLVQRLLEQEHIEI--NDTDSDGKTALLLAVEL--KLKKIAELLCKRG 276 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHSSSCCT--TCCCTTSCCHHHHHHHT--TCHHHHHHHHHHS
T ss_pred CCcHHHHHHHcCCHHHHHHHHhccCCCc--cccCCCCCcHHHHHHHc--CcHHHHHHHHHcC
Confidence 8899999999999999999998 78855 88888999999999854 4578888887764
No 79
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.89 E-value=4.3e-23 Score=167.03 Aligned_cols=132 Identities=26% Similarity=0.353 Sum_probs=63.2
Q ss_pred hcccCCCCChHHHHHHHcC---CHHHHHHHHHCCCCccccc----cCCCCCCCcHHHHHHHCCcHHHHHHHHHcC-CCCC
Q 028370 28 VIDTDDRGWTPLHIGARKG---DIKLVKQLLDEGMDVNVAA----WGPKSKGVTPLHLAAQGGHLEVMDVLLERG-ADID 99 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~g---~~~~v~~Ll~~g~~~~~~~----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~ 99 (210)
++.+|..|.||||+|+..+ +.+++++|+++|++++... ...+..|.||||+|+..|+.+++++|++.+ ++++
T Consensus 228 ~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n 307 (373)
T 2fo1_E 228 IEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD 307 (373)
T ss_dssp TSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTT
T ss_pred hhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCcc
Confidence 3444455555555555544 4555555555555444310 001334555555555555555555555443 4555
Q ss_pred cccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhh
Q 028370 100 ARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRE 165 (210)
Q Consensus 100 ~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~ 165 (210)
..+.. |.||||+|+..|+.+++++|+++|+++ +.+|..|.|||++|+.. +..+++++|.+
T Consensus 308 ~~d~~--g~TpL~~A~~~g~~~iv~~Ll~~gad~--~~~d~~g~t~l~~A~~~--g~~~iv~~Ll~ 367 (373)
T 2fo1_E 308 KQDED--GKTPIMLAAQEGRIEVVMYLIQQGASV--EAVDATDHTARQLAQAN--NHHNIVDIFDR 367 (373)
T ss_dssp CCCTT--CCCHHHHHHHHTCHHHHHHHHHTTCCS--SCCCSSSCCHHHHHHHT--TCHHHHHHHHT
T ss_pred CcCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCc--cCCCCCCCCHHHHHHHc--CCHHHHHHHHh
Confidence 44444 555555555555555555555555533 44555555555555422 23444444443
No 80
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=1.2e-23 Score=150.01 Aligned_cols=115 Identities=23% Similarity=0.294 Sum_probs=92.8
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCc-HHHHHHHCCcHHHHHHHHHcCCCCCcccCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVT-PLHLAAQGGHLEVMDVLLERGADIDARTKG 104 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 104 (210)
.+++.+|..|+||||+|+ .|+.+++++|+++|++++.. +..|.| |||+|+..|+.+++++|+++|++++..+..
T Consensus 36 ~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~----d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 110 (156)
T 1bi7_B 36 ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCA----DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAW 110 (156)
T ss_dssp CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCC----CTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTT
T ss_pred CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCc----CCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCC
Confidence 456778999999999986 89999999999999999988 899999 999999999999999999999999998877
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCccccc
Q 028370 105 ACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYC 149 (210)
Q Consensus 105 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a 149 (210)
|.||||+|+..|+.+++++|+++|+++ +.++..|.||.+-+
T Consensus 111 --g~tpl~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 111 --GRLPVDLAEELGHRDVARYLRAAAGGT--RGSNHARIDAAEGP 151 (156)
T ss_dssp --CCCHHHHHHHHTCHHHHHHHSSCC-------------------
T ss_pred --CCCHHHHHHHhCHHHHHHHHHHcCCCC--CccCcCcCcccccC
Confidence 999999999999999999999999965 88999999998754
No 81
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.89 E-value=2.8e-22 Score=159.75 Aligned_cols=119 Identities=32% Similarity=0.496 Sum_probs=111.1
Q ss_pred hhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCC
Q 028370 25 FRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKG 104 (210)
Q Consensus 25 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 104 (210)
..+++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 48 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~ 123 (351)
T 3utm_A 48 NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAK----DKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLW 123 (351)
T ss_dssp TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc----CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Confidence 4456678999999999999999999999999999999988 899999999999999999999999999999988877
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCccccccc
Q 028370 105 ACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPS 151 (210)
Q Consensus 105 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~ 151 (210)
|.||||+|+..|+.+++++|+++|+++ +..+..|.||+++|+.
T Consensus 124 --g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~~~l~~a~~ 166 (351)
T 3utm_A 124 --QFTPLHEAASKNRVEVCSLLLSHGADP--TLVNCHGKSAVDMAPT 166 (351)
T ss_dssp --CCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHCSS
T ss_pred --CCCHHHHHHHcCCHHHHHHHHHcCCCC--ccccCCCCcchHHHhh
Confidence 999999999999999999999999965 8899999999999984
No 82
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.89 E-value=2.9e-23 Score=159.64 Aligned_cols=135 Identities=27% Similarity=0.274 Sum_probs=109.8
Q ss_pred CCCCChHHHHHH---HcCCHHHHHHHHHCCCCccc-------cccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcc
Q 028370 32 DDRGWTPLHIGA---RKGDIKLVKQLLDEGMDVNV-------AAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDAR 101 (210)
Q Consensus 32 d~~g~t~L~~A~---~~g~~~~v~~Ll~~g~~~~~-------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 101 (210)
|..|.||||+|+ +.|+.+++++|++.|+++.. .....+..|+||||+|+..|+.+++++|++.|++++..
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 122 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ 122 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc
Confidence 377999999999 77999999999998754221 11111558999999999999999999999999999988
Q ss_pred cCC------------CCCChHHHHHHhcCCHHHHHHHHH---cCCCCCCCCCCCCCCCcccccccchHH-------HHHH
Q 028370 102 TKG------------ACGWTPLHTAAKERKKEAVRFLIE---NGAFLPDDINDSRFNPPLHYCPSLEWA-------YEEM 159 (210)
Q Consensus 102 ~~~------------~~g~tpL~~A~~~g~~~~v~~Ll~---~g~~~~~~~~~~~g~t~l~~a~~~~~~-------~~~~ 159 (210)
+.. ..|.||||+|+..|+.+++++|++ .|+++ +.+|..|.||||+|+..+.. ..++
T Consensus 123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~--~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~ 200 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADL--RRQDSRGNTVLHALVAIADNTRENTKFVTKM 200 (260)
T ss_dssp CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT--TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHH
T ss_pred ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCC--cccCCCCCcHHHHHHHhccCchhHHHHHHHH
Confidence 731 229999999999999999999999 88965 89999999999999943321 1467
Q ss_pred HHHhhhhhh
Q 028370 160 MRFQRESFS 168 (210)
Q Consensus 160 ~~~l~~~~~ 168 (210)
+++|.+...
T Consensus 201 v~~Ll~~ga 209 (260)
T 3jxi_A 201 YDLLLIKCA 209 (260)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhCc
Confidence 777776643
No 83
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.89 E-value=3e-23 Score=162.14 Aligned_cols=129 Identities=16% Similarity=0.125 Sum_probs=74.2
Q ss_pred hhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCC-CcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKG-VTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g-~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
+++.+|..|+||||+|+..|+.+++++|+++|++++.. +..| .||||+|+..|+.+++++|++.|+++... ..
T Consensus 87 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~----~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~- 160 (285)
T 3kea_A 87 DDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFY----GKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AI- 160 (285)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGC----SSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-ST-
T ss_pred CCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCcc----CCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cC-
Confidence 34445555566666666666666666666555555554 5555 46666666666666666666555544211 12
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCc-ccccccchHHHHHHHHHhhhh
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPP-LHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~-l~~a~~~~~~~~~~~~~l~~~ 166 (210)
|.||||+|+..|+.+++++|+++|+++ +.++..|.|| ||+|+. .+..+++++|.+.
T Consensus 161 -g~t~L~~A~~~g~~~~v~~Ll~~gad~--n~~~~~g~t~~L~~A~~--~~~~~~v~~Ll~~ 217 (285)
T 3kea_A 161 -LLSCIHITIKNGHVDMMILLLDYMTST--NTNNSLLFIPDIKLAID--NKDIEMLQALFKY 217 (285)
T ss_dssp -HHHHHHHHHHTTCHHHHHHHHHHHHHT--CTTCCCBCCTTHHHHHH--HTCHHHHHHHTTS
T ss_pred -CccHHHHHHHcChHHHHHHHHHcCCCC--CcccCCCCChHHHHHHH--cCCHHHHHHHHHc
Confidence 566666666666666666666666644 5666666665 666663 3335666666554
No 84
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.89 E-value=8.1e-23 Score=165.40 Aligned_cols=135 Identities=22% Similarity=0.297 Sum_probs=105.2
Q ss_pred hhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcC---CCCCcc
Q 028370 25 FRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERG---ADIDAR 101 (210)
Q Consensus 25 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~ 101 (210)
..+++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.+ ++++..
T Consensus 156 ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 231 (373)
T 2fo1_E 156 GADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIY----NKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEEL 231 (373)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCC----CTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCC
T ss_pred CCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCccc----CCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhc
Confidence 4456778899999999999999999999999999998877 788888888888888888888888776 677776
Q ss_pred cCCCCCChHHHHHHhcC---CHHHHHHHHHcCCCCCC------CCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 102 TKGACGWTPLHTAAKER---KKEAVRFLIENGAFLPD------DINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 102 ~~~~~g~tpL~~A~~~g---~~~~v~~Ll~~g~~~~~------~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
+.. |.||||+|+..+ +.+++++|+++|++++. ...+..|.||||+|+..+ ..+++++|.+..
T Consensus 232 d~~--g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g--~~~~v~~Ll~~~ 302 (373)
T 2fo1_E 232 DRN--GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVS--NMPIVKYLVGEK 302 (373)
T ss_dssp CTT--SCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSC--CHHHHHHHHHHS
T ss_pred CCC--CCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhC--CHHHHHHHHHhc
Confidence 666 788888888776 77888888888876531 125667788888887543 367777777654
No 85
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=7e-23 Score=159.60 Aligned_cols=128 Identities=23% Similarity=0.320 Sum_probs=112.9
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCcccc--ccCCCCCCCcHHHHHHHC---CcHHHHHHHHHcCCCCCcccCCCCCCh
Q 028370 35 GWTPLHIGARKGDIKLVKQLLDEGMDVNVA--AWGPKSKGVTPLHLAAQG---GHLEVMDVLLERGADIDARTKGACGWT 109 (210)
Q Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~~~g~t 109 (210)
..++|+.|+..|+.+.+..+++.|++++.. ....+..|.||||+|+.. ++.+++++|+++|++++.++.. |.|
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~--g~T 207 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGK--GST 207 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTT--CCC
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCC--CCC
Confidence 457899999999999999999999986543 122377899999999999 8999999999999999999887 999
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 110 PLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 110 pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
|||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.. +..+++++|.+...
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad~--~~~d~~g~tpL~~A~~~--~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKASI--EIANESGETPLDIAKRL--KHEHCEELLTQALS 262 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHT--TCHHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC--CCccCCCCCHHHHHHHc--CCHHHHHHHHHcCC
Confidence 999999999999999999999966 89999999999999954 45788888887654
No 86
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=4e-22 Score=156.97 Aligned_cols=130 Identities=19% Similarity=0.249 Sum_probs=113.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCccccccC--CCCCCCcHHHHHHHC---CcHHHHHHHHHcCCCCCcccCCCCCC
Q 028370 34 RGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWG--PKSKGVTPLHLAAQG---GHLEVMDVLLERGADIDARTKGACGW 108 (210)
Q Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~~~g~ 108 (210)
.+.++|+.|+..|+.+.++.|++.|++++..... .+..|.||||+|+.. ++.+++++|+++|++++..+.. |.
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~--G~ 227 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAAD--GN 227 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTT--CC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCC--CC
Confidence 3557899999999999999999999998862100 178899999999997 8999999999999999998877 99
Q ss_pred hHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 109 TPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 109 tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
||||+|+..|+.+++++|+++|+++ +.+|..|.|||++|+. .+..+++++|.+....
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~gad~--~~~d~~G~TpL~~A~~--~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKGRALV--GTVNEAGETALDIARK--KHHKECEELLEQAQAG 284 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCC--SCCCTTSCCHHHHHHH--HTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHH--cCCHHHHHHHHHhcCC
Confidence 9999999999999999999999966 8999999999999994 4457888888876543
No 87
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.88 E-value=1.8e-23 Score=159.29 Aligned_cols=127 Identities=24% Similarity=0.278 Sum_probs=83.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHH
Q 028370 32 DDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPL 111 (210)
Q Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL 111 (210)
+..|.||||.|++.++.+.++.|+++|++++. +..|.||||+|+..|+.+++++|++.|++++..+.. |.|||
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-----~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~--g~t~L 74 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKF-----NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDE--GITAL 74 (239)
T ss_dssp ----------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTT--SCCHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCccc-----CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC--CCCHH
Confidence 45799999999999999999999999999875 467889999999999999999999999999988877 99999
Q ss_pred HHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 112 HTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 112 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
|+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.. +..+++++|.+....
T Consensus 75 ~~A~~~g~~~~v~~Ll~~ga~~--~~~d~~g~tpL~~A~~~--~~~~~v~~Ll~~ga~ 128 (239)
T 1ycs_B 75 HNAVCAGHTEIVKFLVQFGVNV--NAADSDGWTPLHCAASC--NNVQVCKFLVESGAA 128 (239)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCT--TCCCTTCCCHHHHHHHT--TCHHHHHHHHHTTCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCC--CccCCCCCCHHHHHHHc--CCHHHHHHHHHcCCC
Confidence 9999999999999999999966 88999999999999954 457899999876443
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=6.3e-22 Score=137.94 Aligned_cols=99 Identities=37% Similarity=0.579 Sum_probs=93.2
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
.+++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 38 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~- 112 (136)
T 2jab_A 38 ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAV----DAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKF- 112 (136)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC----CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcC----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCC-
Confidence 456778999999999999999999999999999999988 899999999999999999999999999999988877
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcC
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENG 130 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g 130 (210)
|.||||+|+..|+.+++++|+++|
T Consensus 113 -g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 113 -GKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp -SCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred -CCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999876
No 89
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=1.6e-22 Score=163.23 Aligned_cols=126 Identities=23% Similarity=0.286 Sum_probs=114.4
Q ss_pred CCChHHHHHHHc-CCHHHHHHHHHCCCCccccccCCC--CCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChH
Q 028370 34 RGWTPLHIGARK-GDIKLVKQLLDEGMDVNVAAWGPK--SKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTP 110 (210)
Q Consensus 34 ~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tp 110 (210)
.+.|+||.|+.. |+.++++.|++.|++++.. + ..|.||||+|+..|+.+++++|+++|++++..+.. |.||
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~----~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~--G~Tp 271 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWV----NGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSA--GRGP 271 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCC----CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCcc----ccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCC--CCCH
Confidence 456899999999 9999999999999999987 6 78999999999999999999999999999998877 9999
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 111 LHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 111 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
||+|+..|+.+++++|+++|+++ +..|..|.||||+|+.. +..+++++|......
T Consensus 272 Lh~A~~~g~~~~v~~LL~~Gad~--~~~d~~G~TpL~~A~~~--g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 272 LHHATILGHTGLACLFLKRGADL--GARDSEGRDPLTIAMET--ANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHT--TCHHHHHHHHHHHC-
T ss_pred HHHHHHcCcHHHHHHHHHCcCCC--CCcCCCCCCHHHHHHHC--CCHHHHHHHHHcCCC
Confidence 99999999999999999999966 89999999999999954 457888888876533
No 90
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.88 E-value=2.5e-22 Score=151.91 Aligned_cols=127 Identities=29% Similarity=0.448 Sum_probs=93.1
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChH
Q 028370 31 TDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTP 110 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tp 110 (210)
.+..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.+++++|++.|++++..+.. |.||
T Consensus 72 ~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~--g~t~ 145 (240)
T 3eu9_A 72 GGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLI----DGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQN--GMTP 145 (240)
T ss_dssp BTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCH
T ss_pred cCCcCCChhHHHHHcCCHHHHHHHHHcCCCCccc----CCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCC--CCcH
Confidence 4445778888888888888888888888777766 777788888888888888888888888777777666 7777
Q ss_pred HHHHHhcCC-HHHHHHHHHcCCCCCCCCCCC-CCCCcccccccchHHHHHHHHHhhhhh
Q 028370 111 LHTAAKERK-KEAVRFLIENGAFLPDDINDS-RFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 111 L~~A~~~g~-~~~v~~Ll~~g~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
||+|+..++ .+++++|++.|+++ +..+. .|.||||+|+. .+..+++++|.+..
T Consensus 146 l~~a~~~~~~~~~~~~L~~~~~~~--~~~~~~~g~t~L~~A~~--~~~~~~v~~Ll~~g 200 (240)
T 3eu9_A 146 LMWAAYRTHSVDPTRLLLTFNVSV--NLGDKYHKNTALHWAVL--AGNTTVISLLLEAG 200 (240)
T ss_dssp HHHHHHHCCSSTTHHHHHHTTCCT--TCCCTTTCCCHHHHHHH--HTCHHHHHHHHHHT
T ss_pred HHHHHHhCChHHHHHHHHhcCCCc--chhhccCCCcHHHHHHH--cCCHHHHHHHHHcC
Confidence 777775555 67777777777755 55554 77777777773 33467777777653
No 91
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=2.3e-22 Score=158.41 Aligned_cols=109 Identities=26% Similarity=0.306 Sum_probs=97.9
Q ss_pred cCCCCChHHHHHHHc---CCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCC
Q 028370 31 TDDRGWTPLHIGARK---GDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACG 107 (210)
Q Consensus 31 ~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g 107 (210)
.|..|.||||+|+.. |+.+++++|+++|++++.. |..|+||||+|+..|+.+++++|++.|++++..+.. |
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~----d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~--G 259 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAK----AADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEA--G 259 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCC----CTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTT--S
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC--C
Confidence 588999999999997 8999999999999999988 999999999999999999999999999999999887 9
Q ss_pred ChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccch
Q 028370 108 WTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLE 153 (210)
Q Consensus 108 ~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~ 153 (210)
.||||+|+..|+.+++++|+++|++ .|.||||+|+..+
T Consensus 260 ~TpL~~A~~~~~~~iv~~Ll~~ga~--------~g~tpLh~A~~~g 297 (301)
T 2b0o_E 260 ETALDIARKKHHKECEELLEQAQAG--------TFAFPLHVDYSWV 297 (301)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHHHH--------TTSSCCC------
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCC--------CCCChhHHHHhcC
Confidence 9999999999999999999999984 4789999998544
No 92
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.88 E-value=4.6e-23 Score=156.28 Aligned_cols=127 Identities=24% Similarity=0.337 Sum_probs=105.2
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDV 90 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (210)
|....+...... ..+++.+|..|+||||+|+..|+.+++++|++.|++++.. |..|.||||+|+..|+.+++++
T Consensus 32 g~~~~v~~Ll~~--g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~----d~~g~tpLh~A~~~g~~~~v~~ 105 (229)
T 2vge_A 32 GELEVVQQAVKE--MNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSP----DSHGWTPLHCAASCNDTVICMA 105 (229)
T ss_dssp TCHHHHHHHHHH--SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CTTCCCHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHhc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC----CCCCCCHHHHHHHcCCHHHHHH
Confidence 344444443332 3467789999999999999999999999999999999988 8999999999999999999999
Q ss_pred HHHcCCCCCccc-CCCCCChHHHHH--HhcCCHHHHHHHHHcCCCCCCCCCCCCCCCccc
Q 028370 91 LLERGADIDART-KGACGWTPLHTA--AKERKKEAVRFLIENGAFLPDDINDSRFNPPLH 147 (210)
Q Consensus 91 Ll~~g~~~~~~~-~~~~g~tpL~~A--~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~ 147 (210)
|++.|++++..+ .+ |.||||+| +..|+.+++++|+++|+++ +..+..|.||++
T Consensus 106 Ll~~ga~~~~~~~~~--g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~--~~~~~~~~~~l~ 161 (229)
T 2vge_A 106 LVQHGAAIFATTLSD--GATAFEKCDPYREGYADCATYLADVEQSM--GLMNSGAVYALW 161 (229)
T ss_dssp HHTTTCCTTCCCSST--TCCTGGGCCTTSTTHHHHHHHHHHHHHHT--TTSGGGEEEESS
T ss_pred HHHcCCCcccccCCC--CCCHHHHHHHHhcChHHHHHHHHHcCCCc--ccccCCchHHHH
Confidence 999999999875 45 99999999 9999999999999987754 444444444444
No 93
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=1.2e-22 Score=141.55 Aligned_cols=100 Identities=24% Similarity=0.340 Sum_probs=94.6
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCC-CCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSK-GVTPLHLAAQGGHLEVMDVLLERGADIDARTKG 104 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 104 (210)
.+++.+|..|+||||+|+. |+.+++++|+++|++++.. +.. |.||||+|+..|+.+++++|++.|++++..+..
T Consensus 36 ~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~----~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 110 (136)
T 1d9s_A 36 ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCA----DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAW 110 (136)
T ss_dssp CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCC----BTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSS
T ss_pred CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCc----CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC
Confidence 4577789999999999999 9999999999999999988 888 999999999999999999999999999999887
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHcCCC
Q 028370 105 ACGWTPLHTAAKERKKEAVRFLIENGAF 132 (210)
Q Consensus 105 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 132 (210)
|.||||+|+..++.+++++|+++|++
T Consensus 111 --g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 111 --GRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp --SSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred --CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999984
No 94
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.87 E-value=7.2e-22 Score=149.35 Aligned_cols=150 Identities=26% Similarity=0.293 Sum_probs=123.1
Q ss_pred cchhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHH
Q 028370 10 LGPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMD 89 (210)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 89 (210)
.|.+..+....... .+++.+|..|.||||+|+..|+.+++++|++.|++++... +..|.||||+|+..|+.++++
T Consensus 19 ~g~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~---~~~~~t~L~~A~~~~~~~~v~ 93 (240)
T 3eu9_A 19 YGIYERCRELVEAG--YDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG---GDLNSTPLHWATRQGHLSMVV 93 (240)
T ss_dssp TTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB---TTTTBCHHHHHHHHTCHHHHH
T ss_pred cCChHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhc---CCcCCChhHHHHHcCCHHHHH
Confidence 35555554444433 4567789999999999999999999999999999887653 556899999999999999999
Q ss_pred HHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhhc
Q 028370 90 VLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFSA 169 (210)
Q Consensus 90 ~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~~ 169 (210)
+|++.|++++..+.. |.||||+|+..|+.+++++|+++|+++ +..+..|.||+++|+..+. ..++++++.+....
T Consensus 94 ~Ll~~g~~~~~~~~~--g~t~l~~A~~~~~~~~~~~Ll~~~~~~--~~~~~~g~t~l~~a~~~~~-~~~~~~~L~~~~~~ 168 (240)
T 3eu9_A 94 QLMKYGADPSLIDGE--GCSCIHLAAQFGHTSIVAYLIAKGQDV--DMMDQNGMTPLMWAAYRTH-SVDPTRLLLTFNVS 168 (240)
T ss_dssp HHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHHHHCC-SSTTHHHHHHTTCC
T ss_pred HHHHcCCCCcccCCC--CCCHHHHHHHcCHHHHHHHHHhcCCCc--cccCCCCCcHHHHHHHhCC-hHHHHHHHHhcCCC
Confidence 999999999988777 999999999999999999999999965 8889999999999984332 24566666665433
No 95
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=3.9e-21 Score=131.39 Aligned_cols=101 Identities=51% Similarity=0.847 Sum_probs=95.4
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGA 105 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 105 (210)
.+++.+|..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..++.+++++|+++|++++..+..
T Consensus 26 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~----~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~- 100 (126)
T 1n0r_A 26 ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAK----DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN- 100 (126)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-
T ss_pred CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCccc----CCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCC-
Confidence 456778999999999999999999999999999999888 899999999999999999999999999999988877
Q ss_pred CCChHHHHHHhcCCHHHHHHHHHcCCC
Q 028370 106 CGWTPLHTAAKERKKEAVRFLIENGAF 132 (210)
Q Consensus 106 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 132 (210)
|.|||++|+..|+.+++++|+++|++
T Consensus 101 -g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 101 -GRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp -SCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred -CCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999984
No 96
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=8.9e-22 Score=164.97 Aligned_cols=129 Identities=19% Similarity=0.260 Sum_probs=112.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCccccccC--CCCCCCcHHHHHHH---CCcHHHHHHHHHcCCCCCcccCCCCCC
Q 028370 34 RGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWG--PKSKGVTPLHLAAQ---GGHLEVMDVLLERGADIDARTKGACGW 108 (210)
Q Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--~~~~g~t~L~~A~~---~~~~~~v~~Ll~~g~~~~~~~~~~~g~ 108 (210)
...+.||.|+..|+.+.++.|++.|++++..... .+..|.||||+|+. .|+.+++++|+++|++++.++.. |.
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~--g~ 208 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAAD--GN 208 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSS--SC
T ss_pred ccHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCC--CC
Confidence 3447899999999999999999999998755211 26689999999976 89999999999999999999887 99
Q ss_pred hHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhhh
Q 028370 109 TPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESFS 168 (210)
Q Consensus 109 tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~~ 168 (210)
||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+.. +..+++++|.+...
T Consensus 209 TpLh~A~~~g~~~~v~~Ll~~ga~~--~~~d~~g~tpl~~A~~~--~~~~~~~~Ll~~ga 264 (497)
T 3lvq_E 209 TALHYAALYNQPDCLKLLLKGRALV--GTVNEAGETALDIARKK--HHKECEELLEQAQA 264 (497)
T ss_dssp CHHHHHTTTTCHHHHHHHHHTCCCC--SCCCTTCCCHHHHHHHT--TCHHHHHHHHHTCC
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHHHHHHc--CCHHHHHHHHHhCC
Confidence 9999999999999999999999966 89999999999999954 45788888887643
No 97
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=1.5e-21 Score=152.05 Aligned_cols=110 Identities=22% Similarity=0.311 Sum_probs=100.2
Q ss_pred hcccCCCCChHHHHHHHc---CCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCC
Q 028370 28 VIDTDDRGWTPLHIGARK---GDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKG 104 (210)
Q Consensus 28 ~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 104 (210)
++..|..|.||||+|+.. |+.+++++|+++|++++.. |..|.||||+|+..|+.+++++|++.|++++..+.+
T Consensus 162 l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~----d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~ 237 (278)
T 1dcq_A 162 LANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQ----TGKGSTALHYCCLTDNAECLKLLLRGKASIEIANES 237 (278)
T ss_dssp CSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCC----CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred ccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCcccc----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCC
Confidence 445688999999999999 8999999999999999988 999999999999999999999999999999999887
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccch
Q 028370 105 ACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLE 153 (210)
Q Consensus 105 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~ 153 (210)
|.||||+|+..|+.+++++|+++|++ .+++|.++...
T Consensus 238 --g~tpL~~A~~~~~~~~v~~Ll~~ga~----------~~~~~~~v~~~ 274 (278)
T 1dcq_A 238 --GETPLDIAKRLKHEHCEELLTQALSG----------RFNSHVHVEYE 274 (278)
T ss_dssp --SCCHHHHHHHTTCHHHHHHHHHHHTT----------CCCSSCCCCCC
T ss_pred --CCCHHHHHHHcCCHHHHHHHHHcCCC----------CCCcceeeecc
Confidence 99999999999999999999999983 35667766544
No 98
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.86 E-value=1.7e-21 Score=143.09 Aligned_cols=122 Identities=16% Similarity=0.157 Sum_probs=104.9
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcH----HHHHHHHHcCCCCCcccCCCCCChH
Q 028370 35 GWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHL----EVMDVLLERGADIDARTKGACGWTP 110 (210)
Q Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~----~~v~~Ll~~g~~~~~~~~~~~g~tp 110 (210)
+.++|+.|++.|+.+.++.++..+.+. .. +..|+||||+|+..++. +++++|++.|++++.++.. |+||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~---~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~--g~Tp 78 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KE---SVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKE--GTTL 78 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HH---HHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTT--CCCT
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--cc---ccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCC--CCcH
Confidence 467899999999999999999887543 30 26799999999999975 5999999999999999877 9999
Q ss_pred HHHHHhcCC------HHHHHHHHHcCCCCCCCCCCCCCC-Ccccccccch---HHHHHHHHHhhh
Q 028370 111 LHTAAKERK------KEAVRFLIENGAFLPDDINDSRFN-PPLHYCPSLE---WAYEEMMRFQRE 165 (210)
Q Consensus 111 L~~A~~~g~------~~~v~~Ll~~g~~~~~~~~~~~g~-t~l~~a~~~~---~~~~~~~~~l~~ 165 (210)
||+|+..++ .+++++|+++|+++ +.+|..|. ||||+|+..+ ....+++++|.+
T Consensus 79 Lh~a~~~~~~~~~~~~~iv~~Ll~~Gadi--n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~ 141 (186)
T 3t8k_A 79 FFPLFQGGGNDITGTTELCKIFLEKGADI--TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFS 141 (186)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCCS--SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHCCCCC--CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHH
Confidence 999999887 68999999999966 89999999 9999998633 445678888876
No 99
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.85 E-value=3.3e-21 Score=153.52 Aligned_cols=128 Identities=27% Similarity=0.336 Sum_probs=111.2
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHH-CCCCccccccCCCCCCCcHHHHHHHCCc----HHHHHHHHHcCCCCCcccCC
Q 028370 30 DTDDRGWTPLHIGARKGDIKLVKQLLD-EGMDVNVAAWGPKSKGVTPLHLAAQGGH----LEVMDVLLERGADIDARTKG 104 (210)
Q Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~~~~~~~~~ 104 (210)
..+..|.||||+|++.|+.+++++|++ .|++++.. +..|.|+++.++..+. ..++++|++.|++++.++..
T Consensus 163 ~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~----d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~ 238 (337)
T 4g8k_A 163 RLRKGGATALMDAAEKGHVEVLKILLDEMGADVNAC----DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER 238 (337)
T ss_dssp -CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCC----CTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGG
T ss_pred cccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCcc----CCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCC
Confidence 356679999999999999999999995 69999988 8999999998876443 46889999999999998877
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhh
Q 028370 105 ACGWTPLHTAAKERKKEAVRFLIEN-GAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRESF 167 (210)
Q Consensus 105 ~~g~tpL~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~~ 167 (210)
|.||||+|+..|+.+++++|++. |+++ +.+|..|.||||+|+.. +..+++++|.+..
T Consensus 239 --g~t~L~~a~~~~~~~~v~~Ll~~~~~~v--n~~d~~G~TpL~~A~~~--g~~~iv~~Ll~~G 296 (337)
T 4g8k_A 239 --GKTPLILAVEKKHLGLVQRLLEQEHIEI--NDTDSDGKTALLLAVEL--KLKKIAELLCKRG 296 (337)
T ss_dssp --GCCHHHHHHHTTCHHHHHHHHTSTTCCT--TCBCTTSCBHHHHHHHT--TCHHHHHHHHTTS
T ss_pred --CCCHHHHHHHhhhhHHHHHHHHhcCCcc--cCcCCCCCCHHHHHHHc--CCHHHHHHHHHCC
Confidence 99999999999999999999986 6755 88999999999999954 4588999998764
No 100
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.85 E-value=7.5e-21 Score=127.83 Aligned_cols=97 Identities=34% Similarity=0.458 Sum_probs=84.7
Q ss_pred HhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccC
Q 028370 24 FFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTK 103 (210)
Q Consensus 24 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 103 (210)
........|.+|.|+||+|+..|+.+++++|++.|++++.. |..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 13 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~----d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 88 (110)
T 2zgd_A 13 LVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAK----DKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDK 88 (110)
T ss_dssp ---------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCC----CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCcc----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc
Confidence 34456678999999999999999999999999999999988 89999999999999999999999999999998887
Q ss_pred CCCCChHHHHHHhcCCHHHHHHH
Q 028370 104 GACGWTPLHTAAKERKKEAVRFL 126 (210)
Q Consensus 104 ~~~g~tpL~~A~~~g~~~~v~~L 126 (210)
. |.||||+|+..|+.+++++|
T Consensus 89 ~--g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 89 F--GKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp T--SCCHHHHHHHHTCHHHHHHH
T ss_pred C--CCcHHHHHHHcCCHHHHHHh
Confidence 7 99999999999999999987
No 101
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.84 E-value=4.5e-20 Score=146.99 Aligned_cols=28 Identities=39% Similarity=0.681 Sum_probs=14.9
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCcc
Q 028370 35 GWTPLHIGARKGDIKLVKQLLDEGMDVN 62 (210)
Q Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 62 (210)
|+||||+|+..|+.+++++|+++|++++
T Consensus 59 g~TpLh~A~~~g~~~iv~~Ll~~ga~~~ 86 (337)
T 4g8k_A 59 GWTPLHNAVQMSREDIVELLLRHGADPV 86 (337)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCchh
Confidence 5555555555555555555555554443
No 102
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=1.7e-20 Score=157.12 Aligned_cols=105 Identities=25% Similarity=0.285 Sum_probs=91.2
Q ss_pred CCCCChHHHHHHH---cCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCC
Q 028370 32 DDRGWTPLHIGAR---KGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGW 108 (210)
Q Consensus 32 d~~g~t~L~~A~~---~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~ 108 (210)
|..|.||||+||. .|+.+++++|+++|++++.. |..|+||||+|+..|+.+++++|+++|++++..+.. |.
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~----d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~--g~ 241 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAK----AADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEA--GE 241 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCC----CSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTT--CC
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCCCcc----CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC--CC
Confidence 8899999999977 89999999999999999988 999999999999999999999999999999999887 99
Q ss_pred hHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 028370 109 TPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCP 150 (210)
Q Consensus 109 tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~ 150 (210)
||||+|+..|+.+++++|+++|+++ +. +|+|.+.
T Consensus 242 tpl~~A~~~~~~~~~~~Ll~~ga~~--~~------~~~h~~~ 275 (497)
T 3lvq_E 242 TALDIARKKHHKECEELLEQAQAGT--FA------FPLHVDY 275 (497)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTCC-------------------
T ss_pred CHHHHHHHcCCHHHHHHHHHhCCCC--CC------Ccceeec
Confidence 9999999999999999999999965 43 5666654
No 103
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.83 E-value=1.1e-20 Score=123.18 Aligned_cols=90 Identities=44% Similarity=0.689 Sum_probs=80.8
Q ss_pred CCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 028370 71 KGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCP 150 (210)
Q Consensus 71 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~ 150 (210)
+|+||||+|+..|+.+++++|++.|++++.++.. |.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~--g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~d~~g~t~l~~A~ 76 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN--GRTPLHLAARNGHLEVVKLLLEAGADV--NAKDKNGRTPLHLAA 76 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCC--CccCCCCCCHHHHHH
Confidence 4789999999999999999999999999998877 999999999999999999999999966 889999999999999
Q ss_pred cchHHHHHHHHHhhhh
Q 028370 151 SLEWAYEEMMRFQRES 166 (210)
Q Consensus 151 ~~~~~~~~~~~~l~~~ 166 (210)
.. +..+++++|.+.
T Consensus 77 ~~--~~~~~~~~Ll~~ 90 (93)
T 1n0q_A 77 RN--GHLEVVKLLLEA 90 (93)
T ss_dssp HT--TCHHHHHHHHHT
T ss_pred Hc--CCHHHHHHHHHc
Confidence 54 457888888754
No 104
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.81 E-value=3e-20 Score=139.66 Aligned_cols=109 Identities=22% Similarity=0.266 Sum_probs=88.5
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHC-CCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDE-GMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKG 104 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 104 (210)
.+++.+|..|+||||+|+..|+.+++++|++. |++++.. |..|.||||+|+..|+.+++++|++.|++++..+..
T Consensus 97 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~----d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 172 (222)
T 3ehr_A 97 VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQ----NKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIE 172 (222)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCC----CTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTT
T ss_pred CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcccc----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCC
Confidence 45677899999999999999999999999998 9999988 999999999999999999999999999999999887
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 028370 105 ACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRF 142 (210)
Q Consensus 105 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g 142 (210)
|.|||++|+..|+.++++.|+..|+.. ...+..+
T Consensus 173 --g~t~l~~A~~~~~~~~l~~l~~~~~~~--~~~~~~~ 206 (222)
T 3ehr_A 173 --KKLAFDMATNAACASLLKKKQGTDAVR--TLSNAED 206 (222)
T ss_dssp --SCCHHHHCCSHHHHHHHC------------------
T ss_pred --CCCHHHHhcchhHHHHHHHHhccchhh--hccchhh
Confidence 999999999999999999999999944 5544443
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=1.3e-19 Score=146.13 Aligned_cols=134 Identities=25% Similarity=0.251 Sum_probs=99.1
Q ss_pred chhHHHHHHhhHHHhhhhcccC--CCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTD--DRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVM 88 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d--~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 88 (210)
|.+..+..... ...+++..| ..|.||||+|+..|+.+++++|+++|++++.. |..|.||||+|+..|+.+++
T Consensus 211 g~~~~v~~LL~--~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~----d~~G~TpLh~A~~~g~~~~v 284 (368)
T 3jue_A 211 PSLPTMADALA--HGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQA----DSAGRGPLHHATILGHTGLA 284 (368)
T ss_dssp CCHHHHHHHHH--TTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CTTSCCHHHHHHHHTCHHHH
T ss_pred CCHHHHHHHHH--cCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCC----CCCCCCHHHHHHHcCcHHHH
Confidence 44444444333 234566677 88999999999999999999999999999988 99999999999999999999
Q ss_pred HHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCC-CCCCCCCCCCCCcccccccc
Q 028370 89 DVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAF-LPDDINDSRFNPPLHYCPSL 152 (210)
Q Consensus 89 ~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~~g~t~l~~a~~~ 152 (210)
++|+++|++++..+.. |.||||+|+..|+.+++++|+..+.. ......+..+.|+++++...
T Consensus 285 ~~LL~~Gad~~~~d~~--G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 285 CLFLKRGADLGARDSE--GRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HHHHHCcCCCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 9999999999999887 99999999999999999999988742 12245566778888887643
No 106
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.81 E-value=3.4e-19 Score=130.20 Aligned_cols=115 Identities=30% Similarity=0.377 Sum_probs=100.6
Q ss_pred hhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCC-CCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccC
Q 028370 25 FRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPK-SKGVTPLHLAAQGGHLEVMDVLLERGADIDARTK 103 (210)
Q Consensus 25 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 103 (210)
..+++.+|..|+||||+|+..|+.+++++|+++|++++.. + ..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 66 ~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~----~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 141 (183)
T 3deo_A 66 DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHR----DMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDE 141 (183)
T ss_dssp TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC----CSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcC----CCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCC
Confidence 3466788999999999999999999999999999999887 6 8899999999999999999999999999999887
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchHHHHHHHHHhhhh
Q 028370 104 GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 104 ~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~l~~~ 166 (210)
. |.||||+|+..++. ..+.+|+++|+ ..+..+++++|.+.
T Consensus 142 ~--g~tpl~~A~~~~~~-------------------~~~~~~l~~a~--~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 142 R--GLTALELAREILKT-------------------TPKGNPMQFGR--RIGLEKVINVLEGQ 181 (183)
T ss_dssp T--SCCHHHHHHHHHHT-------------------CCCCSHHHHHH--HHHHHHHHHHHHTC
T ss_pred C--CCCHHHHHHHhccC-------------------cccccHHHHHH--HcCHHHHHHHHHHh
Confidence 7 99999999874322 23468999998 55678999988764
No 107
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.80 E-value=1.2e-19 Score=124.02 Aligned_cols=104 Identities=28% Similarity=0.421 Sum_probs=87.7
Q ss_pred chhHHHHHHhhHHHhhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHH
Q 028370 11 GPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDV 90 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (210)
|....+...... ..+++.+|..|+||||+|+..|+.+++++|++.|++++.. |..|+||||+|+..++.+++++
T Consensus 18 ~~~~~v~~ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----d~~g~tpL~~A~~~~~~~~v~~ 91 (123)
T 3aaa_C 18 GDLDEVKDYVAK--GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAP----DKHHITPLLSAVYEGHVSCVKL 91 (123)
T ss_dssp TCHHHHHHHHHT--TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCC----CTTSCCHHHHHHHHTCHHHHHH
T ss_pred CCHHHHHHHHHc--CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcC----CCCCCCHHHHHHHcCCHHHHHH
Confidence 444444443332 2457889999999999999999999999999999999988 8999999999999999999999
Q ss_pred HHHcCCCCCcccCCCCCChHHHHHHhcCCHHH
Q 028370 91 LLERGADIDARTKGACGWTPLHTAAKERKKEA 122 (210)
Q Consensus 91 Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~ 122 (210)
|+++|++++..+.. |.||||+|+..+..++
T Consensus 92 Ll~~ga~~~~~~~~--g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 92 LLSKGADKTVKGPD--GLTAFEATDNQAIKAL 121 (123)
T ss_dssp HHHTTCCTTCCCTT--SCCHHHHCCCHHHHHH
T ss_pred HHHcCCCCCCcCCC--CCCHHHHhCCHHHHHH
Confidence 99999999998877 9999999955444433
No 108
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.80 E-value=4.6e-19 Score=135.39 Aligned_cols=100 Identities=32% Similarity=0.388 Sum_probs=90.8
Q ss_pred hhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCC-CCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCC
Q 028370 26 RSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPK-SKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKG 104 (210)
Q Consensus 26 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 104 (210)
.+++.+|..|+||||+|+..|+.+++++|+++|++++.. + ..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 68 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~----~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~ 143 (244)
T 3ui2_A 68 RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHR----DMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDER 143 (244)
T ss_dssp CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCC----CSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcC----CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Confidence 456789999999999999999999999999999999887 6 78999999999999999999999999999988877
Q ss_pred CCCChHHHHHH----------------hcCCHHHHHHHHHcCC
Q 028370 105 ACGWTPLHTAA----------------KERKKEAVRFLIENGA 131 (210)
Q Consensus 105 ~~g~tpL~~A~----------------~~g~~~~v~~Ll~~g~ 131 (210)
|.||||+|+ ..|+.+++++|++++.
T Consensus 144 --g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 144 --GLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp --CCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred --CCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhcc
Confidence 888888887 6688999999998643
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.80 E-value=9.4e-22 Score=159.15 Aligned_cols=131 Identities=13% Similarity=0.097 Sum_probs=86.6
Q ss_pred hhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCC---CcccC
Q 028370 27 SVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADI---DARTK 103 (210)
Q Consensus 27 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~ 103 (210)
.+...+.++.||||+|++.|+.+++++|++.|+..... ...+..|.||||+|+..|+.++|++|+++|+++ +....
T Consensus 84 ~l~~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~-~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~ 162 (376)
T 2aja_A 84 DAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIV-KVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAE 162 (376)
T ss_dssp HHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSC-C--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHH
T ss_pred HHHHcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHH-HHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCC
Confidence 34445666778888888888888888888877622110 001445667888888888888888888887652 22222
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCC--CCCCCCCcccccc-cchHHHHHHHHHhhh
Q 028370 104 GACGWTPLHTAAKERKKEAVRFLIENGAFLPDDI--NDSRFNPPLHYCP-SLEWAYEEMMRFQRE 165 (210)
Q Consensus 104 ~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~--~~~~g~t~l~~a~-~~~~~~~~~~~~l~~ 165 (210)
+.||||+|+..|+.+++++|+++|+++ .. .|..|.||||+|+ ..+. .+++++|.+
T Consensus 163 ---~~TpLh~Aa~~G~~eiv~~Ll~~ga~~--~~~~~d~~g~TpL~~Aa~~~G~--~eiv~~Ll~ 220 (376)
T 2aja_A 163 ---NYHAFRLAAENGHLHVLNRLCELAPTE--ATAMIQAENYYAFRWAAVGRGH--HNVINFLLD 220 (376)
T ss_dssp ---HHHHHHHHHHTTCHHHHHHHHHSCGGG--HHHHHHHHHHHHHHHHHSTTCC--HHHHHHHTT
T ss_pred ---CCCHHHHHHHCCCHHHHHHHHHcCCcc--chhccCCCCCCHHHHHHHHCCC--HHHHHHHHh
Confidence 267888888888888888888888754 33 5666778888877 6543 567776665
No 110
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.79 E-value=6.4e-20 Score=127.76 Aligned_cols=101 Identities=31% Similarity=0.440 Sum_probs=90.0
Q ss_pred hhhhcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCC
Q 028370 25 FRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKG 104 (210)
Q Consensus 25 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 104 (210)
..+++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 33 g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 108 (137)
T 3c5r_A 33 GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTT----GYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIF 108 (137)
T ss_dssp TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----CGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCc----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Confidence 3456778999999999999999999999999999999988 899999999999999999999999999999998887
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHHcCC
Q 028370 105 ACGWTPLHTAAKERKKEAVRFLIENGA 131 (210)
Q Consensus 105 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 131 (210)
|.|||++|+..+..+++++|.+.+.
T Consensus 109 --g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 109 --GLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp --SCCGGGGCCCHHHHHHHSCC-----
T ss_pred --CCCHHHHHhhccHHHHHhhcccccc
Confidence 9999999999999999888877655
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.78 E-value=4.2e-21 Score=155.33 Aligned_cols=139 Identities=12% Similarity=0.142 Sum_probs=109.9
Q ss_pred chhHHHHHHhhHHHhhhhc----------ccCCCCChHHHHHHHcCCHHHHHHHHHCCCCc---cccccCCCCCCCcHHH
Q 028370 11 GPFTLQRKASRKRFFRSVI----------DTDDRGWTPLHIGARKGDIKLVKQLLDEGMDV---NVAAWGPKSKGVTPLH 77 (210)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~----------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~~~~~g~t~L~ 77 (210)
+|+..+.+.+....++.+. ..|..|.||||+|+++|+.+++++|+++|+++ +.. +.+ .||||
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~----~~~-~TpLh 168 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQ----AEN-YHAFR 168 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHS----HHH-HHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccC----CCC-CCHHH
Confidence 5555555555554444332 33456889999999999999999999999763 222 222 89999
Q ss_pred HHHHCCcHHHHHHHHHcCCCCCc--ccCCCCCChHHHHHH-hcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccccccchH
Q 028370 78 LAAQGGHLEVMDVLLERGADIDA--RTKGACGWTPLHTAA-KERKKEAVRFLIENGAFLPDDINDSRFNPPLHYCPSLEW 154 (210)
Q Consensus 78 ~A~~~~~~~~v~~Ll~~g~~~~~--~~~~~~g~tpL~~A~-~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~a~~~~~ 154 (210)
+|+..|+.+++++|+++|++++. .+.. |.||||+|+ ..|+.++|++|++.|+ .|.||+++|+..+
T Consensus 169 ~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~--g~TpL~~Aa~~~G~~eiv~~Ll~~ga---------~~~taL~~Aa~~g- 236 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELAPTEATAMIQAE--NYYAFRWAAVGRGHHNVINFLLDCPV---------MLAYAEIHEFEYG- 236 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGHHHHHHHH--HHHHHHHHHSTTCCHHHHHHHTTSHH---------HHHHHHHCTTTTT-
T ss_pred HHHHCCCHHHHHHHHHcCCccchhccCCC--CCCHHHHHHHHCCCHHHHHHHHhCCC---------ccchHHHHHHHCC-
Confidence 99999999999999999999876 6666 899999999 9999999999999875 2789999999554
Q ss_pred HHHHHHHHhhhhh
Q 028370 155 AYEEMMRFQRESF 167 (210)
Q Consensus 155 ~~~~~~~~l~~~~ 167 (210)
..+++++|.+..
T Consensus 237 -~~evv~lL~~~g 248 (376)
T 2aja_A 237 -EKYVNPFIARHV 248 (376)
T ss_dssp -TTTHHHHHHHHH
T ss_pred -CHHHHHHHHhcC
Confidence 467888887764
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.76 E-value=7.8e-19 Score=117.89 Aligned_cols=89 Identities=29% Similarity=0.372 Sum_probs=80.3
Q ss_pred CCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccc
Q 028370 69 KSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHY 148 (210)
Q Consensus 69 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~ 148 (210)
+.+|.|+||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|+++ +.+|..|.|||++
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~--g~tpLh~A~~~~~~~~v~~Ll~~ga~~--~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKN--GSTPLHLAARNGHLEVVKLLLEAGADV--XAQDKFGKTAFDI 96 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT--CCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCc--cccccCCCcHHHH
Confidence 778999999999999999999999999999988877 999999999999999999999999965 8899999999999
Q ss_pred cccchHHHHHHHHHh
Q 028370 149 CPSLEWAYEEMMRFQ 163 (210)
Q Consensus 149 a~~~~~~~~~~~~~l 163 (210)
|+.. +..+++++|
T Consensus 97 A~~~--~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDN--GNEDLAEIL 109 (110)
T ss_dssp HHHH--TCHHHHHHH
T ss_pred HHHc--CCHHHHHHh
Confidence 9944 456777765
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.76 E-value=1.3e-18 Score=117.48 Aligned_cols=92 Identities=38% Similarity=0.564 Sum_probs=84.4
Q ss_pred CCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCcccc
Q 028370 69 KSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHY 148 (210)
Q Consensus 69 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~g~t~l~~ 148 (210)
|..|+||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|+++ +.+|..|.|||++
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~--g~t~L~~A~~~~~~~~~~~Ll~~g~~~--~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKD--GNTPLHLAAKNGHAEIVKLLLAKGADV--NARSKDGNTPEHL 81 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSS--SCCTTHHHHTTTCHHHHHHHTTTTCCT--TCCCTTCCCTTHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC--CCCHHHHHHHcCcHHHHHHHHHcCCCC--cccCCCCCCHHHH
Confidence 889999999999999999999999999999988877 999999999999999999999999966 8899999999999
Q ss_pred cccchHHHHHHHHHhhhh
Q 028370 149 CPSLEWAYEEMMRFQRES 166 (210)
Q Consensus 149 a~~~~~~~~~~~~~l~~~ 166 (210)
|+..+ ..+++++|.+.
T Consensus 82 A~~~~--~~~~~~~Ll~~ 97 (115)
T 2l6b_A 82 AKKNG--HHEIVKLLDAK 97 (115)
T ss_dssp HHTTT--CHHHHHHHHTT
T ss_pred HHHCC--CHHHHHHHHHc
Confidence 99554 57888888765
No 114
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.75 E-value=2.5e-19 Score=142.46 Aligned_cols=122 Identities=16% Similarity=0.153 Sum_probs=102.8
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCccc-cccCCCCCCCcHHHHHHHCCcHHHHHHHHHcCCCCCcccCCCCCChHHHHHHh
Q 028370 38 PLHIGARKGDIKLVKQLLDEGMDVNV-AAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAK 116 (210)
Q Consensus 38 ~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~ 116 (210)
.+|.|+..+..++++.|++.|++++. . +..|+||||+|+..|+.++|++|++.|++++..+.. |.||||+|+.
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dvn~~~----d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~--g~TpLh~A~~ 173 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNLNIPV----DEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNM--GESCLVKAVK 173 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCSCSCC----STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTT--CCCHHHHHHH
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCccccc----CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC--CCCHHHHHHH
Confidence 35778888888999999999999998 6 899999999999999999999999999999998887 9999999999
Q ss_pred cCC---HHHHHHHHHcC-CCCCCCCCCCCCCCcccccccch--HHHHHHHHHhhhhh
Q 028370 117 ERK---KEAVRFLIENG-AFLPDDINDSRFNPPLHYCPSLE--WAYEEMMRFQRESF 167 (210)
Q Consensus 117 ~g~---~~~v~~Ll~~g-~~~~~~~~~~~g~t~l~~a~~~~--~~~~~~~~~l~~~~ 167 (210)
.|+ .++++.|++.+ ++ .+.+|..|.||||+|+... .+..++++++.+..
T Consensus 174 ~g~~~~~~~~~~ll~~~~~~--~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~ 228 (327)
T 1sw6_A 174 SVNNYDSGTFEALLDYLYPC--LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDIL 228 (327)
T ss_dssp SSHHHHTTCHHHHHHHHGGG--GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred hcccccHHHHHHHHHhhhcc--ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHH
Confidence 998 68888888887 53 4889999999999998521 34467777777653
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=48.69 E-value=14 Score=18.71 Aligned_cols=18 Identities=28% Similarity=0.508 Sum_probs=14.1
Q ss_pred HHHHHHHcCCHHHHHHHH
Q 028370 38 PLHIGARKGDIKLVKQLL 55 (210)
Q Consensus 38 ~L~~A~~~g~~~~v~~Ll 55 (210)
-+..||..|+++.++.|-
T Consensus 16 qiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHH
Confidence 357788889999888774
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=37.97 E-value=1.4e+02 Score=24.18 Aligned_cols=53 Identities=25% Similarity=0.386 Sum_probs=38.8
Q ss_pred HHHHcCCHHHHHHHHHCCCCcccccc--------CC--CCCCCcHHHHHHHCCcHHHHHHHHH
Q 028370 41 IGARKGDIKLVKQLLDEGMDVNVAAW--------GP--KSKGVTPLHLAAQGGHLEVMDVLLE 93 (210)
Q Consensus 41 ~A~~~g~~~~v~~Ll~~g~~~~~~~~--------~~--~~~g~t~L~~A~~~~~~~~v~~Ll~ 93 (210)
..+..|+...|+..+..|.+++...- .+ -.-|.|.+|.|++..+.+++-.|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 34567999999999999988875431 11 1247788888888888887777775
No 117
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=34.29 E-value=1e+02 Score=25.35 Aligned_cols=81 Identities=11% Similarity=0.126 Sum_probs=48.2
Q ss_pred hHHHHHHHcCCHHHHHHHH----HCCCCccccccCCCCCCCcHHHHHHHCCcHH----HHHHHHHcCCCCCcccCCCCCC
Q 028370 37 TPLHIGARKGDIKLVKQLL----DEGMDVNVAAWGPKSKGVTPLHLAAQGGHLE----VMDVLLERGADIDARTKGACGW 108 (210)
Q Consensus 37 t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~~~g~ 108 (210)
+.+...++.|+.+.+..++ +.|..++... . .+.+...+..|..+ +++.+.+.|..++.....
T Consensus 110 ~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t----y--n~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~---- 179 (501)
T 4g26_A 110 NGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS----Y--GPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELA---- 179 (501)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH----H--HHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHH----
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce----e--hHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHH----
Confidence 3456677888876665554 5677666541 1 13455556778764 445556678877765432
Q ss_pred hHHHHHHhcCCHHHHHHHH
Q 028370 109 TPLHTAAKERKKEAVRFLI 127 (210)
Q Consensus 109 tpL~~A~~~g~~~~v~~Ll 127 (210)
+.+...+..|+.+-+.-++
T Consensus 180 ~Li~~~~~~g~~d~A~~ll 198 (501)
T 4g26_A 180 ALLKVSMDTKNADKVYKTL 198 (501)
T ss_dssp HHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhhCCCHHHHHHHH
Confidence 5556667788765443333
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=26.45 E-value=2.1e+02 Score=23.16 Aligned_cols=50 Identities=20% Similarity=0.379 Sum_probs=35.8
Q ss_pred HHCCcHHHHHHHHHcCCCCCccc------------CCCCCChHHHHHHhcCCHHHHHHHHHc
Q 028370 80 AQGGHLEVMDVLLERGADIDART------------KGACGWTPLHTAAKERKKEAVRFLIEN 129 (210)
Q Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~~------------~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 129 (210)
+..|+...|+.-+..|.+++-+- ....|.|.+|+|++..+-+++.+|+..
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 44677777766666665554331 112389999999999999999999874
No 119
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=23.16 E-value=1.6e+02 Score=24.16 Aligned_cols=73 Identities=15% Similarity=0.167 Sum_probs=42.1
Q ss_pred HHHHHHHHCCCCccccccCCCCCCCcHHHHHHHCCcHH----HHHHHHHcCCCCCcccCCCCCChHHHHHHhcCCHHHH-
Q 028370 49 KLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLE----VMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAV- 123 (210)
Q Consensus 49 ~~v~~Ll~~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~~~g~tpL~~A~~~g~~~~v- 123 (210)
+++..+.+.|..++... . .+.+...+..|..+ +++.+...|..++.... .+.+...+..|+.+-+
T Consensus 91 ~lf~~M~~~G~~Pd~~t----y--n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~ty----n~lI~~~~~~g~~~~A~ 160 (501)
T 4g26_A 91 DIFKQMIVDKVVPNEAT----F--TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSY----GPALFGFCRKGDADKAY 160 (501)
T ss_dssp HHHHHHHHTTCCCCHHH----H--HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH----HHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHhCCCCCHHH----H--HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcccee----hHHHHHHHHCCCHHHHH
Confidence 45566667777666541 1 13455556777765 44444556777765543 2556666778885444
Q ss_pred ---HHHHHcCC
Q 028370 124 ---RFLIENGA 131 (210)
Q Consensus 124 ---~~Ll~~g~ 131 (210)
+-+.+.|.
T Consensus 161 ~l~~~M~~~G~ 171 (501)
T 4g26_A 161 EVDAHMVESEV 171 (501)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHhcCC
Confidence 44445555
No 120
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=22.25 E-value=68 Score=29.48 Aligned_cols=85 Identities=12% Similarity=0.132 Sum_probs=53.7
Q ss_pred hHHHHHHHcCCHHHHHHHHH-------CCCCccccccCCCCCCCcHHHHHHHCCcHH----HHHHHHHcCCCCCcccCCC
Q 028370 37 TPLHIGARKGDIKLVKQLLD-------EGMDVNVAAWGPKSKGVTPLHLAAQGGHLE----VMDVLLERGADIDARTKGA 105 (210)
Q Consensus 37 t~L~~A~~~g~~~~v~~Ll~-------~g~~~~~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~~ 105 (210)
+.|.-.|+.|+.+.+..++. .|..++.. .. .+.++--|+.|..+ +++.+.+.|+.+|..+.+
T Consensus 132 aLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pdvv----TY--NtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYn- 204 (1134)
T 3spa_A 132 AFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLD----MY--NAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYA- 204 (1134)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHH----HH--HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHH-
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHh----HH--HHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHH-
Confidence 45567788888877777762 35555544 11 25566667777754 555566678888877644
Q ss_pred CCChHHHHHHhcCC-H----HHHHHHHHcCC
Q 028370 106 CGWTPLHTAAKERK-K----EAVRFLIENGA 131 (210)
Q Consensus 106 ~g~tpL~~A~~~g~-~----~~v~~Ll~~g~ 131 (210)
+.++.-|..|. . ++++-+.+.|.
T Consensus 205 ---tLI~glcK~G~~~e~A~~Ll~EM~~kG~ 232 (1134)
T 3spa_A 205 ---AALQCMGRQDQDAGTIERCLEQMSQEGL 232 (1134)
T ss_dssp ---HHHHHHHHHTCCHHHHHHHHHHHHHHTC
T ss_pred ---HHHHHHHhCCCcHHHHHHHHHHHHHcCC
Confidence 67777777775 2 45555566666
No 121
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=20.72 E-value=15 Score=24.19 Aligned_cols=33 Identities=15% Similarity=0.138 Sum_probs=21.7
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHHCCCCc
Q 028370 29 IDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDV 61 (210)
Q Consensus 29 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 61 (210)
..+|+.-.-++-.|+.+++.++++.|++...+.
T Consensus 29 ~KkDkLykDAietAa~S~d~elaEeLL~yFVe~ 61 (125)
T 3qil_A 29 AKKDSLYKDAMQYASESKDTELAEELLQWFLQE 61 (125)
T ss_dssp CSCCCCSSHHHHTTTSSCCSHHHHHHHHHHTTS
T ss_pred HHhcccHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 345666666777777777777777777665443
Done!