Query 028372
Match_columns 210
No_of_seqs 153 out of 1221
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 17:17:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028372.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028372hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vc3_A Beta-cyanoalnine syntha 100.0 2.2E-54 7.6E-59 368.9 24.1 204 5-208 23-226 (344)
2 4aec_A Cysteine synthase, mito 100.0 6.2E-53 2.1E-57 367.6 24.3 206 3-208 109-314 (430)
3 3tbh_A O-acetyl serine sulfhyd 100.0 2.1E-52 7.1E-57 355.6 25.1 206 3-209 7-212 (334)
4 3dwg_A Cysteine synthase B; su 100.0 2.9E-52 1E-56 353.5 25.2 204 4-209 2-212 (325)
5 1z7w_A Cysteine synthase; tran 100.0 3.5E-52 1.2E-56 352.6 25.3 203 7-209 5-207 (322)
6 2v03_A Cysteine synthase B; py 100.0 7.6E-51 2.6E-55 341.8 26.2 199 9-209 2-200 (303)
7 1y7l_A O-acetylserine sulfhydr 100.0 3.7E-51 1.3E-55 345.4 23.4 201 6-209 2-204 (316)
8 2q3b_A Cysteine synthase A; py 100.0 1.3E-50 4.4E-55 341.7 25.0 204 5-209 4-207 (313)
9 2pqm_A Cysteine synthase; OASS 100.0 2.1E-50 7.2E-55 344.4 23.1 204 4-209 10-218 (343)
10 2egu_A Cysteine synthase; O-ac 100.0 1.4E-50 4.9E-55 340.7 20.9 201 7-209 4-204 (308)
11 1ve1_A O-acetylserine sulfhydr 100.0 5.6E-50 1.9E-54 336.6 24.4 197 11-209 3-201 (304)
12 3l6b_A Serine racemase; pyrido 100.0 9.9E-50 3.4E-54 340.6 19.1 201 3-209 11-211 (346)
13 1jbq_A B, cystathionine beta-s 100.0 5E-49 1.7E-53 344.3 23.2 203 6-209 97-304 (435)
14 1o58_A O-acetylserine sulfhydr 100.0 9.6E-49 3.3E-53 329.0 20.5 194 8-209 11-205 (303)
15 3pc3_A CG1753, isoform A; CBS, 100.0 1.9E-48 6.4E-53 349.2 23.0 204 5-209 48-256 (527)
16 4h27_A L-serine dehydratase/L- 100.0 2.3E-48 7.9E-53 334.1 20.5 193 8-208 37-230 (364)
17 2gn0_A Threonine dehydratase c 100.0 7.2E-49 2.5E-53 334.8 15.4 198 3-209 26-223 (342)
18 1p5j_A L-serine dehydratase; l 100.0 6.5E-48 2.2E-52 332.1 20.4 196 6-209 35-231 (372)
19 1ve5_A Threonine deaminase; ri 100.0 1.4E-48 4.9E-53 328.9 15.2 196 3-209 6-204 (311)
20 1v71_A Serine racemase, hypoth 100.0 1.1E-48 3.9E-53 331.2 13.9 198 3-209 12-209 (323)
21 2rkb_A Serine dehydratase-like 100.0 3.3E-47 1.1E-51 321.5 21.3 188 13-209 3-191 (318)
22 1tdj_A Biosynthetic threonine 100.0 2.2E-47 7.7E-52 338.6 16.0 191 10-209 24-214 (514)
23 3aey_A Threonine synthase; PLP 100.0 4.1E-46 1.4E-50 318.8 20.7 192 8-209 19-219 (351)
24 2d1f_A Threonine synthase; ami 100.0 3.4E-46 1.2E-50 320.3 20.1 193 8-209 29-228 (360)
25 3iau_A Threonine deaminase; py 100.0 8.9E-47 3E-51 324.6 15.7 192 9-209 52-243 (366)
26 2zsj_A Threonine synthase; PLP 100.0 4.4E-46 1.5E-50 318.7 19.5 192 8-209 21-221 (352)
27 1j0a_A 1-aminocyclopropane-1-c 100.0 8E-46 2.7E-50 313.9 18.4 199 5-209 9-216 (325)
28 3ss7_X D-serine dehydratase; t 100.0 1.7E-45 5.9E-50 323.3 20.9 193 13-208 74-305 (442)
29 1f2d_A 1-aminocyclopropane-1-c 100.0 3.5E-46 1.2E-50 318.0 15.7 198 6-209 4-227 (341)
30 4d9b_A D-cysteine desulfhydras 100.0 2.1E-45 7.3E-50 313.4 19.8 199 5-209 20-234 (342)
31 1wkv_A Cysteine synthase; homo 100.0 1.4E-44 4.7E-49 312.5 20.5 188 16-209 95-287 (389)
32 4d9i_A Diaminopropionate ammon 100.0 2.1E-44 7.1E-49 312.9 19.2 194 13-209 40-260 (398)
33 1tzj_A ACC deaminase, 1-aminoc 100.0 3.5E-44 1.2E-48 305.2 17.0 198 5-209 3-224 (338)
34 1x1q_A Tryptophan synthase bet 100.0 5E-42 1.7E-46 299.6 18.5 193 13-209 72-281 (418)
35 1v8z_A Tryptophan synthase bet 100.0 1.9E-41 6.6E-46 293.3 21.6 195 9-209 41-252 (388)
36 1qop_B Tryptophan synthase bet 100.0 8.1E-42 2.8E-46 296.5 18.8 194 10-209 47-256 (396)
37 1e5x_A Threonine synthase; thr 100.0 5.7E-41 2E-45 297.5 19.4 191 11-209 124-327 (486)
38 2o2e_A Tryptophan synthase bet 100.0 3.2E-40 1.1E-44 288.3 19.0 193 12-209 75-283 (422)
39 1vb3_A Threonine synthase; PLP 100.0 1.4E-35 4.7E-40 259.5 15.1 176 16-208 82-273 (428)
40 4f4f_A Threonine synthase; str 100.0 3E-33 1E-37 246.0 16.9 176 17-208 93-285 (468)
41 1kl7_A Threonine synthase; thr 100.0 1.1E-31 3.7E-36 238.6 20.6 185 14-208 93-302 (514)
42 3v7n_A Threonine synthase; ssg 100.0 8.1E-31 2.8E-35 230.9 20.5 180 18-208 103-299 (487)
43 3fwz_A Inner membrane protein 96.3 0.16 5.6E-06 36.3 13.0 51 70-123 8-58 (140)
44 1vp8_A Hypothetical protein AF 94.5 0.43 1.5E-05 36.6 10.1 76 42-123 22-106 (201)
45 3c85_A Putative glutathione-re 94.4 1.1 3.7E-05 33.3 13.2 50 71-123 41-91 (183)
46 3l9w_A Glutathione-regulated p 94.3 1 3.5E-05 38.6 13.3 96 70-207 5-101 (413)
47 3jyn_A Quinone oxidoreductase; 94.2 0.46 1.6E-05 38.9 10.6 60 61-123 134-193 (325)
48 3qwb_A Probable quinone oxidor 93.9 0.69 2.4E-05 37.9 11.2 61 61-124 142-202 (334)
49 4b7c_A Probable oxidoreductase 93.8 0.77 2.6E-05 37.6 11.3 60 61-123 143-203 (336)
50 3s2e_A Zinc-containing alcohol 93.7 0.98 3.3E-05 37.1 11.8 63 58-124 157-219 (340)
51 4a0s_A Octenoyl-COA reductase/ 93.6 0.49 1.7E-05 40.6 10.2 55 63-120 216-270 (447)
52 4dup_A Quinone oxidoreductase; 93.4 0.69 2.3E-05 38.4 10.5 61 61-124 161-221 (353)
53 4fn4_A Short chain dehydrogena 93.3 1.7 5.9E-05 34.6 12.3 55 68-122 7-62 (254)
54 3uog_A Alcohol dehydrogenase; 93.1 1 3.5E-05 37.5 11.1 58 61-122 183-240 (363)
55 2c0c_A Zinc binding alcohol de 93.1 1.1 3.8E-05 37.3 11.2 59 61-122 157-215 (362)
56 3gqv_A Enoyl reductase; medium 93.0 0.55 1.9E-05 39.3 9.3 53 66-122 163-215 (371)
57 4g81_D Putative hexonate dehyd 93.0 2.1 7.2E-05 34.1 12.3 30 68-97 9-38 (255)
58 4eye_A Probable oxidoreductase 93.0 0.8 2.7E-05 37.8 10.2 59 61-122 153-211 (342)
59 2q2v_A Beta-D-hydroxybutyrate 92.9 1.7 5.7E-05 34.0 11.6 54 69-123 5-58 (255)
60 3gms_A Putative NADPH:quinone 92.8 0.68 2.3E-05 38.1 9.5 61 60-123 137-197 (340)
61 3tqh_A Quinone oxidoreductase; 92.5 1 3.4E-05 36.8 10.0 61 58-122 143-203 (321)
62 4gkb_A 3-oxoacyl-[acyl-carrier 92.4 1.7 5.8E-05 34.7 11.1 55 68-122 7-61 (258)
63 3e03_A Short chain dehydrogena 92.4 2.6 9E-05 33.3 12.3 56 68-123 6-69 (274)
64 3gaz_A Alcohol dehydrogenase s 92.4 1.3 4.4E-05 36.5 10.7 54 61-118 144-197 (343)
65 3pi7_A NADH oxidoreductase; gr 92.0 1.2 4E-05 36.8 10.0 66 52-124 153-218 (349)
66 4a2c_A Galactitol-1-phosphate 91.9 1.9 6.6E-05 35.3 11.2 65 59-126 152-216 (346)
67 1kol_A Formaldehyde dehydrogen 91.8 2 6.7E-05 36.1 11.3 57 60-119 178-234 (398)
68 1yb5_A Quinone oxidoreductase; 91.8 2.4 8.2E-05 35.1 11.7 57 61-120 164-220 (351)
69 3kvo_A Hydroxysteroid dehydrog 91.7 3.3 0.00011 34.3 12.4 55 69-123 46-108 (346)
70 2eih_A Alcohol dehydrogenase; 91.7 1.9 6.6E-05 35.4 10.9 59 59-120 157-216 (343)
71 3iup_A Putative NADPH:quinone 91.6 1.4 4.8E-05 36.9 10.1 65 52-124 160-225 (379)
72 3nrc_A Enoyl-[acyl-carrier-pro 91.5 2.1 7.3E-05 34.0 10.7 44 69-113 27-72 (280)
73 3qiv_A Short-chain dehydrogena 91.4 2.2 7.6E-05 33.1 10.6 32 69-100 10-41 (253)
74 1wly_A CAAR, 2-haloacrylate re 91.3 2.1 7.2E-05 34.9 10.8 57 61-120 139-195 (333)
75 1pqw_A Polyketide synthase; ro 91.3 2.8 9.5E-05 31.3 10.7 57 61-120 32-88 (198)
76 3r1i_A Short-chain type dehydr 91.3 2.4 8.2E-05 33.7 10.8 54 69-122 33-87 (276)
77 3afn_B Carbonyl reductase; alp 91.2 3.3 0.00011 31.9 11.4 55 69-123 8-64 (258)
78 2ew8_A (S)-1-phenylethanol deh 91.2 3.3 0.00011 32.2 11.4 53 69-122 8-60 (249)
79 1zsy_A Mitochondrial 2-enoyl t 91.2 1.4 4.9E-05 36.4 9.7 60 61-120 161-221 (357)
80 3rkr_A Short chain oxidoreduct 91.2 2.1 7.3E-05 33.6 10.3 54 69-122 30-84 (262)
81 1jvb_A NAD(H)-dependent alcoho 91.1 2.5 8.5E-05 34.8 11.0 59 60-121 163-222 (347)
82 1v3u_A Leukotriene B4 12- hydr 91.1 3.1 0.00011 33.8 11.6 57 61-120 139-195 (333)
83 2j8z_A Quinone oxidoreductase; 91.0 2.3 8E-05 35.1 10.9 58 61-121 156-213 (354)
84 4ibo_A Gluconate dehydrogenase 90.9 5 0.00017 31.7 12.4 30 69-98 27-56 (271)
85 3gem_A Short chain dehydrogena 90.9 2.7 9.4E-05 33.1 10.8 53 69-123 28-80 (260)
86 1qor_A Quinone oxidoreductase; 90.8 2.4 8.3E-05 34.4 10.7 56 62-120 135-190 (327)
87 3awd_A GOX2181, putative polyo 90.7 2.4 8.2E-05 32.9 10.2 32 69-100 14-45 (260)
88 3fpc_A NADP-dependent alcohol 90.7 1.9 6.4E-05 35.6 9.9 59 59-121 158-217 (352)
89 4ej6_A Putative zinc-binding d 90.6 2 6.8E-05 35.8 10.1 61 59-122 174-234 (370)
90 2g1u_A Hypothetical protein TM 90.6 3 0.0001 29.9 10.0 48 70-120 20-68 (155)
91 3ijr_A Oxidoreductase, short c 90.6 2.6 9E-05 33.7 10.5 54 69-122 48-103 (291)
92 1gu7_A Enoyl-[acyl-carrier-pro 90.6 1.5 5E-05 36.4 9.2 58 63-120 162-221 (364)
93 1g0o_A Trihydroxynaphthalene r 90.5 2.5 8.7E-05 33.5 10.3 54 69-122 30-85 (283)
94 1h2b_A Alcohol dehydrogenase; 90.5 3.3 0.00011 34.3 11.3 56 63-122 182-238 (359)
95 4e3z_A Putative oxidoreductase 90.5 3.1 0.00011 32.8 10.7 55 69-123 27-83 (272)
96 3sc4_A Short chain dehydrogena 90.5 3.9 0.00013 32.6 11.4 34 69-102 10-43 (285)
97 2hcy_A Alcohol dehydrogenase 1 90.4 3.5 0.00012 33.9 11.3 59 59-120 161-219 (347)
98 3krt_A Crotonyl COA reductase; 90.4 1.5 5.1E-05 37.7 9.4 57 63-122 224-280 (456)
99 1id1_A Putative potassium chan 90.3 3.7 0.00013 29.3 11.6 30 72-101 6-35 (153)
100 3a28_C L-2.3-butanediol dehydr 90.3 2.7 9.1E-05 32.9 10.1 32 69-100 3-34 (258)
101 1yb1_A 17-beta-hydroxysteroid 90.2 2.8 9.4E-05 33.1 10.3 32 69-100 32-63 (272)
102 3tjr_A Short chain dehydrogena 90.2 2.5 8.7E-05 34.0 10.1 32 69-100 32-63 (301)
103 3lyl_A 3-oxoacyl-(acyl-carrier 90.2 2.5 8.5E-05 32.7 9.8 54 69-122 6-60 (247)
104 4iin_A 3-ketoacyl-acyl carrier 90.1 2.9 9.8E-05 33.0 10.3 54 69-122 30-85 (271)
105 3tfo_A Putative 3-oxoacyl-(acy 90.1 2.9 9.9E-05 33.1 10.2 54 69-122 5-59 (264)
106 3gaf_A 7-alpha-hydroxysteroid 90.1 2.4 8.3E-05 33.2 9.7 54 69-122 13-67 (256)
107 1sby_A Alcohol dehydrogenase; 90.0 4.8 0.00017 31.2 11.4 32 69-100 6-38 (254)
108 2ae2_A Protein (tropinone redu 90.0 3.9 0.00013 31.9 10.9 54 69-122 10-64 (260)
109 3ucx_A Short chain dehydrogena 90.0 3.2 0.00011 32.6 10.4 33 68-100 11-43 (264)
110 2zb4_A Prostaglandin reductase 89.9 3.9 0.00013 33.7 11.3 57 61-120 152-212 (357)
111 1vj0_A Alcohol dehydrogenase, 89.9 1.9 6.6E-05 36.0 9.5 59 59-121 186-246 (380)
112 1t57_A Conserved protein MTH16 89.9 1.6 5.4E-05 33.5 7.9 75 42-123 30-113 (206)
113 3ged_A Short-chain dehydrogena 89.9 3.6 0.00012 32.5 10.5 50 69-121 3-52 (247)
114 3grk_A Enoyl-(acyl-carrier-pro 89.9 2 6.9E-05 34.5 9.3 32 69-100 32-65 (293)
115 1pl8_A Human sorbitol dehydrog 89.8 7.4 0.00025 32.0 14.7 57 60-120 164-221 (356)
116 3goh_A Alcohol dehydrogenase, 89.8 0.8 2.7E-05 37.2 6.8 58 58-120 133-190 (315)
117 4dmm_A 3-oxoacyl-[acyl-carrier 89.7 3.3 0.00011 32.7 10.4 54 69-122 29-84 (269)
118 3s55_A Putative short-chain de 89.7 2.3 8E-05 33.7 9.5 33 69-101 11-43 (281)
119 2jah_A Clavulanic acid dehydro 89.7 3.5 0.00012 32.0 10.3 32 69-100 8-39 (247)
120 2vn8_A Reticulon-4-interacting 89.6 2.8 9.7E-05 34.8 10.3 55 65-123 181-235 (375)
121 3sju_A Keto reductase; short-c 89.5 2.8 9.6E-05 33.3 9.8 54 69-122 25-79 (279)
122 3fbg_A Putative arginate lyase 89.5 3.4 0.00012 33.9 10.6 59 61-122 138-202 (346)
123 1f8f_A Benzyl alcohol dehydrog 89.4 4.1 0.00014 33.7 11.1 59 61-123 184-243 (371)
124 4fs3_A Enoyl-[acyl-carrier-pro 89.3 2.9 9.9E-05 32.9 9.6 34 68-101 6-41 (256)
125 2rhc_B Actinorhodin polyketide 89.2 3.6 0.00012 32.6 10.2 32 69-100 23-54 (277)
126 3qlj_A Short chain dehydrogena 89.2 3.5 0.00012 33.5 10.3 32 69-100 28-59 (322)
127 2d8a_A PH0655, probable L-thre 89.2 3.4 0.00012 33.9 10.3 57 59-120 160-217 (348)
128 3imf_A Short chain dehydrogena 89.2 1.9 6.6E-05 33.7 8.5 32 69-100 7-38 (257)
129 2hq1_A Glucose/ribitol dehydro 89.1 6.2 0.00021 30.2 11.8 54 69-122 6-61 (247)
130 1fmc_A 7 alpha-hydroxysteroid 89.1 2.7 9.3E-05 32.4 9.3 32 69-100 12-43 (255)
131 4iiu_A 3-oxoacyl-[acyl-carrier 88.9 7 0.00024 30.5 12.2 54 69-122 27-82 (267)
132 3v8b_A Putative dehydrogenase, 88.8 3 0.0001 33.2 9.5 32 69-100 29-60 (283)
133 4da9_A Short-chain dehydrogena 88.7 2.1 7.1E-05 34.2 8.5 54 69-122 30-85 (280)
134 2dph_A Formaldehyde dismutase; 88.7 4.8 0.00016 33.7 11.1 57 59-119 177-234 (398)
135 1zem_A Xylitol dehydrogenase; 88.7 3.8 0.00013 32.1 9.9 32 69-100 8-39 (262)
136 3ip1_A Alcohol dehydrogenase, 88.6 2.1 7.3E-05 36.1 8.8 56 64-122 210-265 (404)
137 1gee_A Glucose 1-dehydrogenase 88.6 4.3 0.00015 31.5 10.1 54 69-122 8-63 (261)
138 1ae1_A Tropinone reductase-I; 88.5 4.7 0.00016 31.7 10.4 32 69-100 22-53 (273)
139 3t7c_A Carveol dehydrogenase; 88.4 3.3 0.00011 33.3 9.5 33 69-101 29-61 (299)
140 3oig_A Enoyl-[acyl-carrier-pro 88.4 6.8 0.00023 30.5 11.2 33 69-101 8-42 (266)
141 1geg_A Acetoin reductase; SDR 88.3 4.5 0.00015 31.5 10.1 32 69-100 3-34 (256)
142 3sx2_A Putative 3-ketoacyl-(ac 88.3 3.1 0.00011 32.8 9.2 33 68-100 13-45 (278)
143 2uvd_A 3-oxoacyl-(acyl-carrier 88.3 3.9 0.00013 31.6 9.7 32 69-100 5-36 (246)
144 3llv_A Exopolyphosphatase-rela 88.3 5 0.00017 28.0 13.9 50 71-123 8-57 (141)
145 2j3h_A NADP-dependent oxidored 88.2 4.7 0.00016 32.9 10.6 57 61-120 149-206 (345)
146 3pgx_A Carveol dehydrogenase; 88.2 3.3 0.00011 32.8 9.4 32 69-100 16-47 (280)
147 1iz0_A Quinone oxidoreductase; 88.2 2 7E-05 34.5 8.1 55 61-119 120-174 (302)
148 1e3j_A NADP(H)-dependent ketos 88.1 4.6 0.00016 33.2 10.5 56 61-120 162-217 (352)
149 3two_A Mannitol dehydrogenase; 88.1 1.8 6.3E-05 35.6 8.0 57 60-120 169-225 (348)
150 1rjw_A ADH-HT, alcohol dehydro 88.1 4.5 0.00015 33.1 10.3 52 64-119 161-212 (339)
151 3uko_A Alcohol dehydrogenase c 88.1 3.6 0.00012 34.3 9.8 57 60-120 186-243 (378)
152 3tox_A Short chain dehydrogena 88.1 8.5 0.00029 30.5 11.7 30 69-98 9-38 (280)
153 3h7a_A Short chain dehydrogena 88.1 7.1 0.00024 30.4 11.1 72 69-140 8-81 (252)
154 3oid_A Enoyl-[acyl-carrier-pro 88.1 8.1 0.00028 30.2 12.0 54 69-122 5-60 (258)
155 2c07_A 3-oxoacyl-(acyl-carrier 88.0 2.3 7.8E-05 33.8 8.3 31 69-99 45-75 (285)
156 3i1j_A Oxidoreductase, short c 87.9 7.6 0.00026 29.8 11.5 32 69-100 15-46 (247)
157 3tzq_B Short-chain type dehydr 87.9 8.5 0.00029 30.2 12.3 34 69-102 12-45 (271)
158 3uf0_A Short-chain dehydrogena 87.8 3 0.0001 33.1 8.9 56 69-124 32-87 (273)
159 3uve_A Carveol dehydrogenase ( 87.7 3.6 0.00012 32.6 9.3 33 68-100 11-43 (286)
160 1xq1_A Putative tropinone redu 87.7 4.5 0.00016 31.5 9.8 32 69-100 15-46 (266)
161 1xg5_A ARPG836; short chain de 87.7 6.3 0.00022 31.0 10.7 32 69-100 33-64 (279)
162 3ctm_A Carbonyl reductase; alc 87.6 6.7 0.00023 30.7 10.8 54 69-122 35-89 (279)
163 4eez_A Alcohol dehydrogenase 1 87.5 4.8 0.00016 32.9 10.2 64 60-127 156-220 (348)
164 3cxt_A Dehydrogenase with diff 87.5 4.2 0.00014 32.6 9.6 32 69-100 35-66 (291)
165 1vl8_A Gluconate 5-dehydrogena 87.5 4.8 0.00016 31.7 9.8 32 69-100 22-53 (267)
166 2o23_A HADH2 protein; HSD17B10 87.5 8.5 0.00029 29.7 11.7 34 69-102 13-46 (265)
167 3r3s_A Oxidoreductase; structu 87.4 9.7 0.00033 30.4 12.6 31 69-99 50-80 (294)
168 3pk0_A Short-chain dehydrogena 87.4 4.2 0.00014 31.9 9.4 32 69-100 11-42 (262)
169 3rih_A Short chain dehydrogena 87.4 4.9 0.00017 32.3 10.0 33 69-101 42-74 (293)
170 3osu_A 3-oxoacyl-[acyl-carrier 87.3 8.5 0.00029 29.7 12.0 54 69-122 5-60 (246)
171 1xa0_A Putative NADPH dependen 87.2 1.8 6.1E-05 35.2 7.3 57 61-120 142-199 (328)
172 2zat_A Dehydrogenase/reductase 87.2 5.3 0.00018 31.1 9.9 32 69-100 15-46 (260)
173 3svt_A Short-chain type dehydr 87.1 6.3 0.00022 31.1 10.4 32 69-100 12-43 (281)
174 2b5w_A Glucose dehydrogenase; 87.1 2.1 7.3E-05 35.4 7.8 50 69-119 174-226 (357)
175 1uls_A Putative 3-oxoacyl-acyl 87.1 8.8 0.0003 29.6 11.6 32 69-100 6-37 (245)
176 3pxx_A Carveol dehydrogenase; 87.0 4.3 0.00015 32.0 9.4 33 69-101 11-43 (287)
177 1edo_A Beta-keto acyl carrier 86.9 6.8 0.00023 29.9 10.3 32 69-100 2-33 (244)
178 1x1t_A D(-)-3-hydroxybutyrate 86.9 5.9 0.0002 30.9 10.0 31 69-99 5-35 (260)
179 3tpc_A Short chain alcohol deh 86.8 8.8 0.0003 29.8 11.0 33 69-101 8-40 (257)
180 1tt7_A YHFP; alcohol dehydroge 86.7 1.8 6E-05 35.3 7.0 56 61-119 143-199 (330)
181 3rwb_A TPLDH, pyridoxal 4-dehy 86.7 8 0.00027 29.9 10.6 31 68-98 6-36 (247)
182 3v2g_A 3-oxoacyl-[acyl-carrier 86.6 10 0.00035 29.9 12.6 55 68-122 31-87 (271)
183 3l6e_A Oxidoreductase, short-c 86.6 5.5 0.00019 30.7 9.6 32 69-100 4-35 (235)
184 3is3_A 17BETA-hydroxysteroid d 86.5 10 0.00035 29.7 11.9 55 69-123 19-75 (270)
185 3gdg_A Probable NADP-dependent 86.3 4.9 0.00017 31.3 9.2 34 69-102 21-56 (267)
186 1yxm_A Pecra, peroxisomal tran 86.3 6.7 0.00023 31.2 10.2 32 69-100 19-50 (303)
187 1p0f_A NADP-dependent alcohol 86.3 4.8 0.00016 33.4 9.6 57 61-120 185-241 (373)
188 1piw_A Hypothetical zinc-type 86.2 3.2 0.00011 34.3 8.4 58 59-120 171-228 (360)
189 3k31_A Enoyl-(acyl-carrier-pro 86.2 6 0.0002 31.7 9.9 33 69-101 31-65 (296)
190 3u0b_A Oxidoreductase, short c 86.2 4.5 0.00015 34.9 9.6 55 68-122 213-267 (454)
191 3n74_A 3-ketoacyl-(acyl-carrie 86.2 5.9 0.0002 30.8 9.6 32 69-100 10-41 (261)
192 4fc7_A Peroxisomal 2,4-dienoyl 86.1 9.3 0.00032 30.1 10.9 32 69-100 28-59 (277)
193 3l77_A Short-chain alcohol deh 86.1 4.9 0.00017 30.6 9.0 32 69-100 3-34 (235)
194 3o26_A Salutaridine reductase; 86.1 7.6 0.00026 30.7 10.5 88 69-185 13-102 (311)
195 3ek2_A Enoyl-(acyl-carrier-pro 86.0 4.7 0.00016 31.4 9.0 73 68-141 14-90 (271)
196 3grp_A 3-oxoacyl-(acyl carrier 86.0 6.5 0.00022 31.0 9.9 31 69-99 28-58 (266)
197 1iy8_A Levodione reductase; ox 86.0 6.5 0.00022 30.7 9.8 32 69-100 14-45 (267)
198 3m1a_A Putative dehydrogenase; 85.9 5.9 0.0002 31.2 9.6 33 69-101 6-38 (281)
199 3ftp_A 3-oxoacyl-[acyl-carrier 85.9 10 0.00035 29.8 11.0 32 69-100 29-60 (270)
200 1w6u_A 2,4-dienoyl-COA reducta 85.7 6.3 0.00021 31.3 9.8 32 69-100 27-58 (302)
201 2cdc_A Glucose dehydrogenase g 85.7 3.5 0.00012 34.1 8.5 51 68-119 181-231 (366)
202 3nx4_A Putative oxidoreductase 85.7 2.3 7.8E-05 34.5 7.2 54 64-120 142-196 (324)
203 1e3i_A Alcohol dehydrogenase, 85.6 5.8 0.0002 32.9 9.8 57 61-120 189-245 (376)
204 1mxh_A Pteridine reductase 2; 85.6 6.8 0.00023 30.7 9.8 32 69-100 12-43 (276)
205 4e6p_A Probable sorbitol dehyd 85.5 6.4 0.00022 30.6 9.6 32 69-100 9-40 (259)
206 2cfc_A 2-(R)-hydroxypropyl-COM 85.5 4.6 0.00016 31.0 8.6 32 69-100 3-34 (250)
207 3tpf_A Otcase, ornithine carba 85.2 4.5 0.00015 33.2 8.6 63 60-122 138-206 (307)
208 2jhf_A Alcohol dehydrogenase E 85.1 6.4 0.00022 32.6 9.8 57 61-120 185-241 (374)
209 3zu3_A Putative reductase YPO4 85.1 7.8 0.00027 33.1 10.3 101 39-141 19-135 (405)
210 1cdo_A Alcohol dehydrogenase; 85.1 6.8 0.00023 32.4 10.0 57 61-120 186-242 (374)
211 1hdc_A 3-alpha, 20 beta-hydrox 85.0 9.3 0.00032 29.6 10.3 33 68-100 5-37 (254)
212 3op4_A 3-oxoacyl-[acyl-carrier 85.0 6.6 0.00023 30.4 9.4 33 68-100 9-41 (248)
213 2bd0_A Sepiapterin reductase; 85.0 7.7 0.00026 29.6 9.7 25 69-93 3-27 (244)
214 3gvc_A Oxidoreductase, probabl 85.0 7 0.00024 31.0 9.7 31 69-99 30-60 (277)
215 3u9l_A 3-oxoacyl-[acyl-carrier 85.0 13 0.00046 30.1 11.6 33 69-101 6-38 (324)
216 4fgs_A Probable dehydrogenase 84.9 5.1 0.00018 32.1 8.7 32 68-99 29-60 (273)
217 3lf2_A Short chain oxidoreduct 84.8 12 0.00042 29.1 11.3 33 68-100 8-40 (265)
218 3gk3_A Acetoacetyl-COA reducta 84.5 13 0.00044 29.1 11.3 31 69-99 26-56 (269)
219 2x9g_A PTR1, pteridine reducta 84.5 8.9 0.00031 30.3 10.1 33 69-101 24-56 (288)
220 3ezl_A Acetoacetyl-COA reducta 84.5 5.8 0.0002 30.7 8.8 74 68-141 13-89 (256)
221 3jv7_A ADH-A; dehydrogenase, n 84.4 9.7 0.00033 31.0 10.5 55 64-122 168-223 (345)
222 3kzv_A Uncharacterized oxidore 84.4 5.1 0.00017 31.2 8.4 25 69-93 3-27 (254)
223 1xkq_A Short-chain reductase f 84.4 6.5 0.00022 31.0 9.2 32 69-100 7-38 (280)
224 2pnf_A 3-oxoacyl-[acyl-carrier 84.4 7.1 0.00024 29.8 9.2 32 69-100 8-39 (248)
225 2p91_A Enoyl-[acyl-carrier-pro 84.3 14 0.00046 29.2 11.1 33 69-101 22-56 (285)
226 3oec_A Carveol dehydrogenase ( 84.2 15 0.00051 29.6 12.6 32 69-100 47-78 (317)
227 1xhl_A Short-chain dehydrogena 83.9 7.4 0.00025 31.2 9.4 32 69-100 27-58 (297)
228 4ekn_B Aspartate carbamoyltran 83.9 6.2 0.00021 32.3 8.9 62 60-122 144-210 (306)
229 4dyv_A Short-chain dehydrogena 83.9 8.7 0.0003 30.3 9.7 32 69-100 29-60 (272)
230 3s8m_A Enoyl-ACP reductase; ro 83.8 11 0.00036 32.4 10.6 99 41-141 35-149 (422)
231 1hxh_A 3BETA/17BETA-hydroxyste 83.8 12 0.00041 28.9 10.4 30 69-98 7-36 (253)
232 2b4q_A Rhamnolipids biosynthes 83.7 6.5 0.00022 31.1 8.9 30 69-98 30-59 (276)
233 4dry_A 3-oxoacyl-[acyl-carrier 83.7 8.8 0.0003 30.4 9.7 31 69-99 34-64 (281)
234 2r6j_A Eugenol synthase 1; phe 83.6 8.4 0.00029 30.7 9.7 54 70-123 13-67 (318)
235 4egf_A L-xylulose reductase; s 83.5 8.8 0.0003 30.0 9.6 32 69-100 21-52 (266)
236 3zv4_A CIS-2,3-dihydrobiphenyl 83.5 11 0.00038 29.7 10.2 32 69-100 6-37 (281)
237 1uuf_A YAHK, zinc-type alcohol 83.4 5.4 0.00019 33.1 8.6 55 62-120 189-243 (369)
238 2fzw_A Alcohol dehydrogenase c 83.3 6.8 0.00023 32.4 9.2 56 61-120 184-240 (373)
239 3gxh_A Putative phosphatase (D 83.3 10 0.00035 27.4 9.1 22 161-184 86-107 (157)
240 3u5t_A 3-oxoacyl-[acyl-carrier 83.2 11 0.00036 29.7 10.0 72 69-140 28-102 (267)
241 3v2h_A D-beta-hydroxybutyrate 83.2 15 0.00052 28.9 11.9 30 69-98 26-55 (281)
242 3edm_A Short chain dehydrogena 83.1 8.5 0.00029 30.0 9.3 72 69-140 9-83 (259)
243 4dqx_A Probable oxidoreductase 83.0 9.4 0.00032 30.2 9.6 32 69-100 28-59 (277)
244 3ai3_A NADPH-sorbose reductase 83.0 14 0.00049 28.5 11.9 32 69-100 8-39 (263)
245 3ak4_A NADH-dependent quinucli 82.9 8.3 0.00028 30.0 9.1 32 69-100 13-44 (263)
246 1c1d_A L-phenylalanine dehydro 82.8 5 0.00017 33.6 8.1 66 50-119 155-222 (355)
247 3m6i_A L-arabinitol 4-dehydrog 82.8 18 0.00063 29.6 12.7 58 59-119 171-228 (363)
248 3o38_A Short chain dehydrogena 82.7 15 0.00051 28.5 10.7 32 69-100 23-55 (266)
249 3tsc_A Putative oxidoreductase 82.5 16 0.00054 28.6 12.5 32 69-100 12-43 (277)
250 3f1l_A Uncharacterized oxidore 82.4 15 0.00052 28.3 11.0 33 68-100 12-44 (252)
251 3i4f_A 3-oxoacyl-[acyl-carrier 82.0 10 0.00036 29.3 9.4 33 69-101 8-40 (264)
252 2gas_A Isoflavone reductase; N 81.9 6.7 0.00023 31.0 8.4 54 70-123 4-64 (307)
253 2aef_A Calcium-gated potassium 81.8 15 0.00052 28.0 10.9 49 70-123 10-58 (234)
254 4ep1_A Otcase, ornithine carba 81.6 11 0.00036 31.4 9.5 62 60-122 172-239 (340)
255 1nff_A Putative oxidoreductase 81.4 10 0.00034 29.6 9.1 32 69-100 8-39 (260)
256 2gk4_A Conserved hypothetical 81.4 2.4 8.3E-05 33.4 5.3 26 77-102 28-53 (232)
257 4eso_A Putative oxidoreductase 81.2 8.8 0.0003 29.9 8.7 33 68-100 8-40 (255)
258 2bgk_A Rhizome secoisolaricire 81.2 13 0.00045 28.9 9.8 32 69-100 17-48 (278)
259 2fwm_X 2,3-dihydro-2,3-dihydro 81.2 17 0.00057 28.0 10.4 33 69-101 8-40 (250)
260 1sny_A Sniffer CG10964-PA; alp 81.1 5.3 0.00018 31.0 7.4 55 69-123 22-79 (267)
261 2d1y_A Hypothetical protein TT 80.9 17 0.00059 28.0 11.1 33 69-101 7-39 (256)
262 3e8x_A Putative NAD-dependent 80.9 5.7 0.00019 30.3 7.3 51 69-122 22-73 (236)
263 1pvv_A Otcase, ornithine carba 80.9 12 0.00041 30.8 9.5 61 61-122 149-215 (315)
264 4imr_A 3-oxoacyl-(acyl-carrier 80.8 9.2 0.00032 30.2 8.8 55 69-123 34-89 (275)
265 1zk4_A R-specific alcohol dehy 80.5 11 0.00036 28.9 8.9 32 69-100 7-38 (251)
266 3nyw_A Putative oxidoreductase 80.4 12 0.0004 29.1 9.1 32 69-100 8-39 (250)
267 3csu_A Protein (aspartate carb 80.4 8.1 0.00028 31.7 8.4 62 60-122 147-213 (310)
268 2et6_A (3R)-hydroxyacyl-COA de 80.2 26 0.0009 31.2 12.4 55 68-123 322-376 (604)
269 1vlv_A Otcase, ornithine carba 80.0 14 0.00048 30.5 9.7 61 61-122 161-228 (325)
270 2a4k_A 3-oxoacyl-[acyl carrier 79.7 20 0.00068 28.0 10.7 32 69-100 7-38 (263)
271 2i6u_A Otcase, ornithine carba 79.7 15 0.00052 30.0 9.8 62 60-122 141-209 (307)
272 2qhx_A Pteridine reductase 1; 79.7 19 0.00063 29.3 10.5 103 69-185 47-153 (328)
273 3ksu_A 3-oxoacyl-acyl carrier 79.3 12 0.00041 29.2 8.9 72 69-140 12-88 (262)
274 2nm0_A Probable 3-oxacyl-(acyl 79.3 20 0.00067 27.8 10.2 33 69-101 22-54 (253)
275 4a27_A Synaptic vesicle membra 79.2 10 0.00036 31.0 8.9 56 61-121 136-192 (349)
276 3i6i_A Putative leucoanthocyan 79.0 9.8 0.00034 30.8 8.6 53 70-122 12-68 (346)
277 3p19_A BFPVVD8, putative blue 79.0 12 0.00042 29.3 9.0 32 69-100 17-48 (266)
278 3icc_A Putative 3-oxoacyl-(acy 78.6 16 0.00053 28.0 9.4 57 68-124 7-65 (255)
279 1a3w_A Pyruvate kinase; allost 78.5 18 0.00061 31.7 10.3 119 84-208 283-424 (500)
280 1ml4_A Aspartate transcarbamoy 78.5 7.1 0.00024 32.0 7.4 61 60-122 148-213 (308)
281 4dvj_A Putative zinc-dependent 78.1 9.3 0.00032 31.6 8.3 58 61-121 160-223 (363)
282 1zmt_A Haloalcohol dehalogenas 78.1 4.5 0.00015 31.5 6.0 64 70-134 3-66 (254)
283 2dtx_A Glucose 1-dehydrogenase 78.1 22 0.00076 27.6 11.1 34 69-102 9-42 (264)
284 1wma_A Carbonyl reductase [NAD 77.8 9.8 0.00034 29.3 8.0 73 68-140 4-79 (276)
285 3dii_A Short-chain dehydrogena 77.6 22 0.00075 27.3 11.5 31 69-99 3-33 (247)
286 2gdz_A NAD+-dependent 15-hydro 77.5 15 0.0005 28.6 8.9 32 69-100 8-39 (267)
287 3kkj_A Amine oxidase, flavin-c 77.4 2.6 8.8E-05 31.6 4.3 28 72-99 5-32 (336)
288 1e7w_A Pteridine reductase; di 77.4 12 0.0004 29.8 8.4 103 69-185 10-116 (291)
289 3un1_A Probable oxidoreductase 77.2 15 0.00051 28.7 8.9 33 69-101 29-61 (260)
290 2pd4_A Enoyl-[acyl-carrier-pro 77.1 22 0.00074 27.8 9.9 72 69-141 7-82 (275)
291 1spx_A Short-chain reductase f 76.8 10 0.00035 29.7 7.9 32 69-100 7-38 (278)
292 2h6e_A ADH-4, D-arabinose 1-de 76.5 9 0.00031 31.3 7.7 51 64-119 168-220 (344)
293 3ic5_A Putative saccharopine d 76.3 11 0.00036 24.9 6.9 50 70-123 7-57 (118)
294 1lnq_A MTHK channels, potassiu 76.2 22 0.00075 28.8 9.9 49 70-123 116-164 (336)
295 3gd5_A Otcase, ornithine carba 76.1 20 0.00068 29.6 9.5 61 61-122 151-217 (323)
296 1h5q_A NADP-dependent mannitol 76.0 17 0.00059 27.9 8.9 73 69-141 15-90 (265)
297 4eue_A Putative reductase CA_C 75.9 36 0.0012 29.0 12.0 100 40-141 34-149 (418)
298 1yqd_A Sinapyl alcohol dehydro 75.9 15 0.0005 30.3 8.9 53 64-120 183-237 (366)
299 2w37_A Ornithine carbamoyltran 75.9 17 0.00059 30.4 9.2 61 61-122 170-237 (359)
300 1yde_A Retinal dehydrogenase/r 75.9 26 0.0009 27.3 11.1 31 69-99 10-40 (270)
301 3ioy_A Short-chain dehydrogena 75.8 17 0.00057 29.4 9.1 73 69-141 9-85 (319)
302 3c1o_A Eugenol synthase; pheny 75.7 13 0.00043 29.7 8.3 55 69-123 5-65 (321)
303 1ja9_A 4HNR, 1,3,6,8-tetrahydr 75.7 10 0.00035 29.4 7.5 55 69-123 22-78 (274)
304 2hmt_A YUAA protein; RCK, KTN, 75.7 16 0.00056 24.9 10.6 48 72-122 9-56 (144)
305 3qp9_A Type I polyketide synth 75.6 15 0.00053 32.1 9.3 60 65-124 248-323 (525)
306 2ph3_A 3-oxoacyl-[acyl carrier 75.5 24 0.00081 26.7 11.5 31 70-100 3-33 (245)
307 2cf5_A Atccad5, CAD, cinnamyl 75.4 13 0.00044 30.5 8.4 55 62-120 174-230 (357)
308 3huu_A Transcription regulator 75.3 28 0.00094 27.3 18.5 154 47-207 41-237 (305)
309 2qq5_A DHRS1, dehydrogenase/re 74.6 12 0.00043 28.9 7.7 71 69-139 6-78 (260)
310 3l4b_C TRKA K+ channel protien 73.9 26 0.00089 26.3 12.5 49 72-123 3-52 (218)
311 1qyc_A Phenylcoumaran benzylic 73.8 19 0.00066 28.3 8.8 54 69-122 5-64 (308)
312 2fr1_A Erythromycin synthase, 73.3 20 0.00067 31.1 9.3 60 65-124 223-287 (486)
313 4hp8_A 2-deoxy-D-gluconate 3-d 73.1 13 0.00045 29.3 7.5 55 68-123 9-63 (247)
314 1zq6_A Otcase, ornithine carba 72.9 34 0.0012 28.6 10.2 44 79-122 207-257 (359)
315 3vtz_A Glucose 1-dehydrogenase 72.9 31 0.0011 26.9 10.2 34 68-101 14-47 (269)
316 2ehd_A Oxidoreductase, oxidore 72.8 28 0.00095 26.2 11.7 32 69-100 6-37 (234)
317 2z5l_A Tylkr1, tylactone synth 72.4 21 0.0007 31.2 9.3 60 65-124 256-320 (511)
318 3hut_A Putative branched-chain 72.4 32 0.0011 27.4 10.0 128 70-207 74-226 (358)
319 2dq4_A L-threonine 3-dehydroge 72.1 20 0.0007 29.1 8.8 52 62-119 160-212 (343)
320 1u7z_A Coenzyme A biosynthesis 71.6 6.9 0.00024 30.6 5.4 34 68-101 8-57 (226)
321 1xu9_A Corticosteroid 11-beta- 71.1 16 0.00056 28.7 7.8 55 69-123 29-85 (286)
322 1duv_G Octase-1, ornithine tra 71.1 15 0.0005 30.5 7.5 45 78-122 166-216 (333)
323 2wm3_A NMRA-like family domain 71.1 28 0.00097 27.2 9.2 54 69-123 6-60 (299)
324 1qyd_A Pinoresinol-lariciresin 70.6 17 0.00056 28.7 7.7 54 69-122 5-63 (313)
325 3rku_A Oxidoreductase YMR226C; 70.4 14 0.00048 29.4 7.2 25 69-93 34-58 (287)
326 1dxh_A Ornithine carbamoyltran 70.1 14 0.00049 30.5 7.3 45 78-122 166-216 (335)
327 1gud_A ALBP, D-allose-binding 70.1 32 0.0011 26.7 9.3 47 157-207 178-226 (288)
328 3h75_A Periplasmic sugar-bindi 69.7 41 0.0014 26.9 16.7 42 163-207 195-240 (350)
329 3o74_A Fructose transport syst 69.6 34 0.0012 26.0 17.5 43 163-207 169-214 (272)
330 1qsg_A Enoyl-[acyl-carrier-pro 69.4 26 0.0009 27.1 8.6 72 69-141 10-85 (265)
331 3tl3_A Short-chain type dehydr 68.5 20 0.00069 27.6 7.7 50 69-123 10-59 (257)
332 3qk7_A Transcriptional regulat 68.5 40 0.0014 26.2 19.1 42 163-207 177-222 (294)
333 2dwc_A PH0318, 433AA long hypo 68.5 51 0.0018 27.5 11.2 32 70-101 20-51 (433)
334 3h2s_A Putative NADH-flavin re 68.3 15 0.00052 27.3 6.7 50 70-122 2-51 (224)
335 3ew7_A LMO0794 protein; Q8Y8U8 68.2 33 0.0011 25.2 9.2 49 70-122 2-50 (221)
336 2wyu_A Enoyl-[acyl carrier pro 67.8 26 0.00087 27.1 8.2 71 69-140 9-83 (261)
337 2e7j_A SEP-tRNA:Cys-tRNA synth 67.1 18 0.00061 29.1 7.3 51 71-122 71-121 (371)
338 1wwk_A Phosphoglycerate dehydr 67.0 31 0.0011 27.8 8.7 104 70-197 143-248 (307)
339 3rot_A ABC sugar transporter, 66.8 43 0.0015 26.0 17.7 44 162-208 177-225 (297)
340 4ggo_A Trans-2-enoyl-COA reduc 66.8 26 0.00089 29.8 8.3 73 69-141 51-138 (401)
341 3hcw_A Maltose operon transcri 66.5 44 0.0015 26.0 16.9 43 163-207 179-227 (295)
342 1pg5_A Aspartate carbamoyltran 66.0 11 0.00037 30.8 5.6 59 61-122 143-205 (299)
343 1p9o_A Phosphopantothenoylcyst 65.7 5.4 0.00019 32.8 3.8 27 76-102 63-89 (313)
344 4a8t_A Putrescine carbamoyltra 65.6 24 0.00082 29.3 7.8 53 70-122 177-235 (339)
345 1ek6_A UDP-galactose 4-epimera 65.2 28 0.00094 27.9 8.1 32 69-100 3-34 (348)
346 1leh_A Leucine dehydrogenase; 65.0 29 0.001 28.9 8.3 46 70-118 174-220 (364)
347 3get_A Histidinol-phosphate am 64.9 25 0.00087 28.2 7.9 82 71-154 84-166 (365)
348 3slk_A Polyketide synthase ext 64.9 30 0.001 32.0 9.1 59 66-124 528-592 (795)
349 2wsb_A Galactitol dehydrogenas 64.8 29 0.001 26.3 7.9 33 69-101 12-44 (254)
350 3d4o_A Dipicolinate synthase s 64.4 52 0.0018 26.1 9.8 47 70-119 156-202 (293)
351 2ekp_A 2-deoxy-D-gluconate 3-d 64.3 20 0.00069 27.3 6.8 50 69-123 3-52 (239)
352 4a8p_A Putrescine carbamoyltra 64.1 26 0.00088 29.3 7.7 34 70-103 155-188 (355)
353 4fcc_A Glutamate dehydrogenase 64.0 49 0.0017 28.5 9.6 52 49-100 215-266 (450)
354 1kjq_A GART 2, phosphoribosylg 63.9 54 0.0018 26.8 9.9 32 70-101 12-43 (391)
355 2z1n_A Dehydrogenase; reductas 63.7 29 0.001 26.7 7.8 33 69-101 8-40 (260)
356 3ppi_A 3-hydroxyacyl-COA dehyd 63.7 34 0.0012 26.6 8.2 67 69-137 31-98 (281)
357 1yo6_A Putative carbonyl reduc 63.6 17 0.00057 27.5 6.2 52 69-123 4-58 (250)
358 3rd5_A Mypaa.01249.C; ssgcid, 63.5 37 0.0013 26.7 8.4 55 68-124 16-70 (291)
359 1x13_A NAD(P) transhydrogenase 63.5 17 0.00059 30.7 6.7 48 70-120 173-220 (401)
360 8abp_A L-arabinose-binding pro 63.4 50 0.0017 25.6 13.7 45 162-207 184-231 (306)
361 1oth_A Protein (ornithine tran 63.3 27 0.00094 28.7 7.7 61 61-122 149-215 (321)
362 2fn9_A Ribose ABC transporter, 62.8 31 0.001 26.7 7.8 42 163-207 181-223 (290)
363 1l7d_A Nicotinamide nucleotide 62.3 15 0.0005 30.8 6.0 47 70-119 173-219 (384)
364 1gz6_A Estradiol 17 beta-dehyd 62.3 60 0.002 26.1 10.8 30 69-98 10-39 (319)
365 3ly1_A Putative histidinol-pho 62.3 19 0.00066 28.8 6.6 54 70-124 69-122 (354)
366 3egc_A Putative ribose operon 62.2 52 0.0018 25.3 19.3 33 173-207 185-221 (291)
367 3cq5_A Histidinol-phosphate am 61.7 18 0.00062 29.3 6.4 82 71-154 94-177 (369)
368 3mje_A AMPHB; rossmann fold, o 61.6 49 0.0017 28.7 9.4 56 69-124 240-300 (496)
369 3r6d_A NAD-dependent epimerase 61.3 26 0.00089 26.1 6.9 32 70-101 7-39 (221)
370 3f9t_A TDC, L-tyrosine decarbo 61.2 20 0.00067 28.9 6.5 55 70-124 87-153 (397)
371 2ekl_A D-3-phosphoglycerate de 61.1 50 0.0017 26.7 8.9 104 70-197 143-248 (313)
372 2pd6_A Estradiol 17-beta-dehyd 60.9 15 0.0005 28.3 5.5 33 69-101 8-40 (264)
373 3oz2_A Digeranylgeranylglycero 60.3 9 0.00031 31.1 4.3 28 72-99 7-34 (397)
374 4ffl_A PYLC; amino acid, biosy 60.1 13 0.00045 30.4 5.3 32 70-101 2-33 (363)
375 3k4h_A Putative transcriptiona 60.1 56 0.0019 25.1 19.8 33 173-207 191-227 (292)
376 3slk_A Polyketide synthase ext 60.1 6.9 0.00024 36.3 3.8 40 61-100 339-378 (795)
377 3ipc_A ABC transporter, substr 60.1 63 0.0021 25.6 11.2 140 53-207 59-225 (356)
378 2bkw_A Alanine-glyoxylate amin 59.7 20 0.00069 28.9 6.4 84 70-154 60-150 (385)
379 3gg9_A D-3-phosphoglycerate de 59.6 33 0.0011 28.4 7.6 105 70-197 161-267 (352)
380 3orq_A N5-carboxyaminoimidazol 59.4 39 0.0013 27.9 8.1 32 70-101 13-44 (377)
381 3k92_A NAD-GDH, NAD-specific g 58.8 24 0.00083 30.2 6.8 53 49-102 201-254 (424)
382 3ryc_A Tubulin alpha chain; al 58.6 36 0.0012 29.3 7.9 65 144-209 91-171 (451)
383 3ryc_B Tubulin beta chain; alp 58.6 13 0.00045 32.1 5.1 65 144-209 89-169 (445)
384 1rpn_A GDP-mannose 4,6-dehydra 58.4 25 0.00085 28.0 6.6 36 66-101 12-47 (335)
385 2dbq_A Glyoxylate reductase; D 58.2 60 0.002 26.4 9.0 104 70-197 151-256 (334)
386 3snr_A Extracellular ligand-bi 57.8 68 0.0023 25.3 12.0 139 54-207 59-222 (362)
387 4e4t_A Phosphoribosylaminoimid 57.7 18 0.00063 30.6 5.9 36 65-101 32-67 (419)
388 1e0t_A Pyruvate kinase, PK; ph 57.5 95 0.0033 26.9 10.4 119 84-208 263-400 (470)
389 2izz_A Pyrroline-5-carboxylate 57.4 73 0.0025 25.6 11.6 115 71-207 24-142 (322)
390 1gtm_A Glutamate dehydrogenase 57.3 38 0.0013 28.9 7.7 51 50-101 192-245 (419)
391 1bgv_A Glutamate dehydrogenase 57.3 32 0.0011 29.7 7.3 50 50-100 211-261 (449)
392 1tjy_A Sugar transport protein 57.3 69 0.0024 25.2 16.7 42 163-207 179-221 (316)
393 1oaa_A Sepiapterin reductase; 57.0 33 0.0011 26.3 6.9 71 69-139 7-84 (259)
394 3gv0_A Transcriptional regulat 56.8 65 0.0022 24.8 21.6 42 164-208 179-224 (288)
395 3ek2_A Enoyl-(acyl-carrier-pro 56.7 33 0.0011 26.3 6.9 85 94-185 15-103 (271)
396 1jx6_A LUXP protein; protein-l 56.5 72 0.0025 25.2 16.0 41 164-207 225-266 (342)
397 4hb9_A Similarities with proba 56.4 12 0.00041 30.6 4.4 29 71-99 3-31 (412)
398 3aoe_E Glutamate dehydrogenase 56.4 30 0.001 29.5 6.9 51 50-101 199-250 (419)
399 3g85_A Transcriptional regulat 56.3 28 0.00096 26.9 6.5 42 164-208 179-224 (289)
400 4g2n_A D-isomer specific 2-hyd 56.3 50 0.0017 27.3 8.2 104 70-197 174-279 (345)
401 3m89_A FTSZ/tubulin-related pr 56.0 12 0.00042 32.0 4.4 37 174-210 147-188 (427)
402 3f9i_A 3-oxoacyl-[acyl-carrier 55.9 28 0.00095 26.5 6.3 33 68-100 14-46 (249)
403 3t4x_A Oxidoreductase, short c 55.6 37 0.0012 26.3 7.0 55 69-123 11-68 (267)
404 3ce6_A Adenosylhomocysteinase; 55.4 40 0.0014 29.4 7.7 52 63-118 269-320 (494)
405 2bto_A Tubulin btuba; bacteria 54.8 22 0.00075 30.9 5.9 65 145-209 94-173 (473)
406 3sds_A Ornithine carbamoyltran 54.7 82 0.0028 26.2 9.2 45 68-112 188-234 (353)
407 2h7i_A Enoyl-[acyl-carrier-pro 54.5 37 0.0013 26.3 6.9 71 69-140 8-81 (269)
408 3enk_A UDP-glucose 4-epimerase 54.5 63 0.0021 25.6 8.5 33 69-101 6-38 (341)
409 3d3w_A L-xylulose reductase; u 54.3 47 0.0016 25.0 7.3 53 68-123 7-61 (244)
410 3gbc_A Pyrazinamidase/nicotina 54.3 56 0.0019 24.1 7.6 59 58-120 119-184 (186)
411 3ffh_A Histidinol-phosphate am 54.2 15 0.0005 29.6 4.6 54 70-124 85-138 (363)
412 4drs_A Pyruvate kinase; glycol 54.2 1.1E+02 0.0038 26.9 10.3 119 84-208 313-454 (526)
413 2rir_A Dipicolinate synthase, 53.7 47 0.0016 26.4 7.5 46 70-118 158-203 (300)
414 2ywl_A Thioredoxin reductase r 53.7 24 0.00084 25.3 5.4 32 71-102 3-34 (180)
415 2h78_A Hibadh, 3-hydroxyisobut 53.6 43 0.0015 26.4 7.3 45 70-117 4-48 (302)
416 1rkx_A CDP-glucose-4,6-dehydra 53.6 28 0.00094 28.1 6.2 33 69-101 10-42 (357)
417 4dll_A 2-hydroxy-3-oxopropiona 53.5 48 0.0016 26.7 7.6 44 70-116 32-75 (320)
418 3l49_A ABC sugar (ribose) tran 53.4 73 0.0025 24.4 21.0 146 54-208 52-224 (291)
419 4fk1_A Putative thioredoxin re 53.4 14 0.00049 29.2 4.3 29 71-99 8-36 (304)
420 3q2o_A Phosphoribosylaminoimid 53.2 20 0.00068 29.7 5.3 34 67-101 13-46 (389)
421 4gcm_A TRXR, thioredoxin reduc 53.0 15 0.0005 29.1 4.3 29 71-99 8-36 (312)
422 1xgk_A Nitrogen metabolite rep 52.9 37 0.0013 27.7 6.9 53 69-122 6-59 (352)
423 1cyd_A Carbonyl reductase; sho 52.9 51 0.0017 24.7 7.3 52 69-123 8-61 (244)
424 2yfk_A Aspartate/ornithine car 52.8 30 0.001 29.6 6.3 44 79-122 206-255 (418)
425 2tmg_A Protein (glutamate dehy 52.8 52 0.0018 28.0 7.8 51 50-101 190-242 (415)
426 2btq_B Tubulin btubb; structur 52.8 53 0.0018 28.0 8.0 66 144-209 90-170 (426)
427 2cul_A Glucose-inhibited divis 52.6 16 0.00054 27.9 4.3 31 71-101 5-35 (232)
428 3aog_A Glutamate dehydrogenase 52.4 40 0.0014 29.0 7.1 51 50-101 216-267 (440)
429 4a5l_A Thioredoxin reductase; 52.3 12 0.00042 29.4 3.7 29 71-99 6-34 (314)
430 3jtm_A Formate dehydrogenase, 52.2 66 0.0023 26.6 8.3 106 70-197 165-272 (351)
431 3grf_A Ornithine carbamoyltran 52.1 49 0.0017 27.2 7.3 45 78-122 172-226 (328)
432 2z1m_A GDP-D-mannose dehydrata 51.8 55 0.0019 25.8 7.7 33 69-101 4-36 (345)
433 4hvk_A Probable cysteine desul 51.8 21 0.00073 28.5 5.2 85 70-154 61-151 (382)
434 2hqb_A Transcriptional activat 51.8 23 0.00078 28.1 5.3 40 162-208 172-211 (296)
435 3l6u_A ABC-type sugar transpor 51.6 79 0.0027 24.2 19.6 43 163-208 185-228 (293)
436 3ksu_A 3-oxoacyl-acyl carrier 51.3 52 0.0018 25.4 7.3 87 94-184 12-101 (262)
437 1gdh_A D-glycerate dehydrogena 51.0 61 0.0021 26.3 7.8 106 70-197 147-254 (320)
438 2g76_A 3-PGDH, D-3-phosphoglyc 50.9 72 0.0024 26.1 8.3 104 70-197 166-271 (335)
439 3ado_A Lambda-crystallin; L-gu 50.8 18 0.00062 29.7 4.5 31 70-100 7-37 (319)
440 1lss_A TRK system potassium up 50.8 54 0.0018 22.0 7.1 47 72-121 7-54 (140)
441 1v9l_A Glutamate dehydrogenase 50.7 30 0.001 29.6 6.0 51 50-101 191-242 (421)
442 4f2g_A Otcase 1, ornithine car 50.7 10 0.00035 31.1 3.0 43 60-103 147-189 (309)
443 3q98_A Transcarbamylase; rossm 50.6 30 0.001 29.4 5.9 44 79-122 209-258 (399)
444 3guy_A Short-chain dehydrogena 50.3 50 0.0017 24.7 6.9 51 70-123 3-54 (230)
445 3rss_A Putative uncharacterize 50.2 59 0.002 28.3 8.0 50 70-119 54-110 (502)
446 3d3j_A Enhancer of mRNA-decapp 50.2 66 0.0023 26.1 7.8 49 70-118 134-190 (306)
447 3g0o_A 3-hydroxyisobutyrate de 50.1 43 0.0015 26.6 6.7 46 70-118 8-53 (303)
448 3nnk_A Ureidoglycine-glyoxylat 50.0 48 0.0016 26.9 7.2 83 70-153 65-150 (411)
449 3doj_A AT3G25530, dehydrogenas 49.8 46 0.0016 26.6 6.8 45 70-117 22-66 (310)
450 2vz8_A Fatty acid synthase; tr 49.4 1.3E+02 0.0044 31.8 11.4 60 65-124 1881-1945(2512)
451 2iks_A DNA-binding transcripti 49.4 31 0.0011 26.8 5.7 33 173-207 196-232 (293)
452 3d3k_A Enhancer of mRNA-decapp 49.3 54 0.0019 25.8 7.0 32 70-101 87-121 (259)
453 3e48_A Putative nucleoside-dip 49.3 27 0.00094 27.1 5.3 32 70-101 2-34 (289)
454 1orr_A CDP-tyvelose-2-epimeras 49.3 95 0.0033 24.5 9.0 31 70-100 3-33 (347)
455 3m2p_A UDP-N-acetylglucosamine 49.3 43 0.0015 26.3 6.6 33 69-101 3-35 (311)
456 3p2y_A Alanine dehydrogenase/p 49.1 33 0.0011 28.9 6.0 49 70-121 185-233 (381)
457 3v8e_A Nicotinamidase; hydrola 49.1 74 0.0025 24.1 7.6 50 70-119 156-214 (216)
458 1ps9_A 2,4-dienoyl-COA reducta 49.0 93 0.0032 27.8 9.4 32 70-101 374-405 (671)
459 1byk_A Protein (trehalose oper 48.9 38 0.0013 25.6 6.0 33 173-207 171-204 (255)
460 2gqw_A Ferredoxin reductase; f 48.8 45 0.0015 27.7 6.9 51 70-120 146-206 (408)
461 3dme_A Conserved exported prot 48.8 22 0.00075 28.5 4.8 32 70-101 5-36 (369)
462 4e12_A Diketoreductase; oxidor 48.7 74 0.0025 25.0 7.9 31 70-100 5-35 (283)
463 2fvy_A D-galactose-binding per 48.6 91 0.0031 24.0 15.2 43 163-207 191-235 (309)
464 2yfq_A Padgh, NAD-GDH, NAD-spe 48.2 31 0.0011 29.4 5.8 52 50-102 193-245 (421)
465 2oln_A NIKD protein; flavoprot 48.1 19 0.00063 29.6 4.3 31 70-100 5-35 (397)
466 3gyb_A Transcriptional regulat 47.9 89 0.003 23.7 16.5 47 157-207 161-211 (280)
467 3rp8_A Flavoprotein monooxygen 47.8 20 0.00067 29.7 4.4 32 70-101 24-55 (407)
468 3isl_A Purine catabolism prote 47.8 53 0.0018 26.7 7.1 82 72-154 65-149 (416)
469 3oj0_A Glutr, glutamyl-tRNA re 47.7 26 0.0009 24.3 4.6 48 70-120 22-70 (144)
470 3ip1_A Alcohol dehydrogenase, 47.7 1.2E+02 0.004 25.1 11.0 85 105-205 227-315 (404)
471 3gg8_A Pyruvate kinase; malari 47.6 71 0.0024 28.0 8.0 119 84-208 298-439 (511)
472 2ioy_A Periplasmic sugar-bindi 47.4 93 0.0032 23.8 17.6 43 163-208 173-216 (283)
473 3s2u_A UDP-N-acetylglucosamine 47.4 1.1E+02 0.0039 24.8 11.4 108 69-196 2-114 (365)
474 1eg5_A Aminotransferase; PLP-d 47.4 27 0.00092 28.0 5.2 54 71-124 63-122 (384)
475 2et6_A (3R)-hydroxyacyl-COA de 47.3 87 0.003 27.8 8.8 30 69-98 9-38 (604)
476 1ebd_A E3BD, dihydrolipoamide 47.3 69 0.0024 26.9 7.9 51 70-120 171-230 (455)
477 1yvv_A Amine oxidase, flavin-c 47.0 20 0.0007 28.4 4.3 31 71-101 4-34 (336)
478 3euc_A Histidinol-phosphate am 47.0 15 0.00051 29.6 3.5 83 70-154 86-170 (367)
479 3alj_A 2-methyl-3-hydroxypyrid 47.0 22 0.00075 29.1 4.6 32 70-101 12-43 (379)
480 1lu9_A Methylene tetrahydromet 46.9 64 0.0022 25.4 7.2 56 43-100 95-151 (287)
481 1v59_A Dihydrolipoamide dehydr 46.7 57 0.002 27.6 7.3 50 70-119 184-242 (478)
482 3l6d_A Putative oxidoreductase 46.7 46 0.0016 26.6 6.4 43 71-116 11-53 (306)
483 3fsl_A Aromatic-amino-acid ami 46.7 44 0.0015 27.1 6.4 53 71-123 97-150 (397)
484 3asu_A Short-chain dehydrogena 46.7 68 0.0023 24.5 7.2 50 70-122 2-52 (248)
485 3r3j_A Glutamate dehydrogenase 46.7 34 0.0012 29.6 5.8 52 49-100 219-270 (456)
486 3edm_A Short chain dehydrogena 46.7 96 0.0033 23.7 8.6 87 94-185 9-97 (259)
487 3cgv_A Geranylgeranyl reductas 46.6 20 0.00069 29.2 4.3 32 70-101 5-36 (397)
488 3brs_A Periplasmic binding pro 46.6 95 0.0032 23.7 9.4 43 163-208 180-224 (289)
489 3kke_A LACI family transcripti 46.5 1E+02 0.0034 23.9 21.4 33 173-207 196-232 (303)
490 3khd_A Pyruvate kinase; malari 46.5 85 0.0029 27.6 8.3 119 84-208 307-448 (520)
491 1ryi_A Glycine oxidase; flavop 46.5 25 0.00085 28.5 4.8 32 70-101 18-49 (382)
492 2x5d_A Probable aminotransfera 46.4 62 0.0021 26.5 7.4 83 71-154 101-185 (412)
493 2w2k_A D-mandelate dehydrogena 46.3 1.2E+02 0.0041 24.8 10.1 106 70-197 164-272 (348)
494 2c29_D Dihydroflavonol 4-reduc 46.2 55 0.0019 26.0 6.8 35 69-103 6-40 (337)
495 3ihm_A Styrene monooxygenase A 46.2 17 0.00059 30.6 3.8 32 70-101 23-54 (430)
496 3kax_A Aminotransferase, class 46.2 1.1E+02 0.0038 24.3 8.9 53 70-123 83-135 (383)
497 3lvm_A Cysteine desulfurase; s 46.1 39 0.0014 27.6 6.1 84 71-154 87-176 (423)
498 3ksm_A ABC-type sugar transpor 45.9 94 0.0032 23.4 20.4 42 163-207 177-220 (276)
499 3fbs_A Oxidoreductase; structu 45.9 27 0.00093 26.9 4.8 31 70-100 3-33 (297)
500 3pdu_A 3-hydroxyisobutyrate de 45.9 35 0.0012 26.9 5.5 29 72-100 4-32 (287)
No 1
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=100.00 E-value=2.2e-54 Score=368.94 Aligned_cols=204 Identities=54% Similarity=0.948 Sum_probs=191.4
Q ss_pred hhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028372 5 NAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGL 84 (210)
Q Consensus 5 ~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~al 84 (210)
..+.+.|.+.|++|||+++++|++.+|++||+|+|++|||||||+|++.+++.+|.++|.+.+++++||++|+||||+|+
T Consensus 23 ~~i~~~i~~lIG~TPLv~~~~Ls~~~G~~IylK~E~lnptGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~al 102 (344)
T 3vc3_A 23 TNIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISM 102 (344)
T ss_dssp CSCBSSGGGGSCCCCEEECCSTTTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHH
T ss_pred hhhhccHhhhcCCCceEECcccchhhCCEEEEEecCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred HHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHH
Q 028372 85 AFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTG 164 (210)
Q Consensus 85 A~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~ 164 (210)
|++|+.+|++|+||||+++++.|++.++.+||+|+.++...+..++...+.++..+.++.+|++||+||.+++.||.|++
T Consensus 103 A~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~~~a~~~t~g 182 (344)
T 3vc3_A 103 AFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTG 182 (344)
T ss_dssp HHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEECCCTTTCHHHHHHHHHTHH
T ss_pred HHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCCCcchHHHHHHHHHHhhccCceeccccccchhHHHHHHHHH
Confidence 99999999999999999999999999999999999998755556666667777777779999999999999889999999
Q ss_pred HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372 165 PEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV 208 (210)
Q Consensus 165 ~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~ 208 (210)
.||++|+++.+|+||+|+|+||+++|++.++|+.+|+++||+|-
T Consensus 183 ~EI~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigVe 226 (344)
T 3vc3_A 183 PEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVE 226 (344)
T ss_dssp HHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred HHHHHHhCCCceEEEEecCCccchHHHhhhhHhhCCCceEEEEc
Confidence 99999998889999999999999999999999999999999985
No 2
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=100.00 E-value=6.2e-53 Score=367.64 Aligned_cols=206 Identities=65% Similarity=1.101 Sum_probs=196.1
Q ss_pred chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372 3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV 82 (210)
Q Consensus 3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~ 82 (210)
+.+++++++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++.+++++|.+++|..+||++|+||||+
T Consensus 109 ~~~~~~~~i~~~ig~TPLv~l~~Ls~~~g~~I~lK~E~lnptGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~aSsGNhG~ 188 (430)
T 4aec_A 109 DGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGI 188 (430)
T ss_dssp SSCSCBSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHH
T ss_pred cccchhhhhhccCCCCCeEEChhhhhhcCCeEEEEECCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEECCCHHHH
Confidence 55778899999999999999999998889999999999999999999999999999999999999888899999999999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372 83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET 162 (210)
Q Consensus 83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t 162 (210)
|+|++|+.+|++|++|+|++++..|++.++.+||+|+.++...+++++.+.+++++++.++++|++||+||.+++.||.|
T Consensus 189 AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~~~~~~~a~~~a~el~~~~~~~~~i~~~~np~~~~aG~~T 268 (430)
T 4aec_A 189 GLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYET 268 (430)
T ss_dssp HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEEECCTTTCTHHHHHHHHT
T ss_pred HHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECCCCChHHHHHHHHHHHHhcCCcEEecCCCCccHHHHHHHH
Confidence 99999999999999999999999999999999999999986556889999999999887789999999999998899999
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV 208 (210)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~ 208 (210)
++.||++|++++||+||+|+|+||+++|++.++|+.+|+++||||.
T Consensus 269 ~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVe 314 (430)
T 4aec_A 269 TGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVE 314 (430)
T ss_dssp HHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred HHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence 9999999997789999999999999999999999999999999995
No 3
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=100.00 E-value=2.1e-52 Score=355.60 Aligned_cols=206 Identities=41% Similarity=0.734 Sum_probs=192.5
Q ss_pred chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372 3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV 82 (210)
Q Consensus 3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~ 82 (210)
++..+++++.+.+++|||++++++ ...|.+||+|+|++|||||||+|++.+++.++.++|.+++|...|+++|+||||+
T Consensus 7 ~i~~~~~~i~~~ig~TPL~~l~~l-~~~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g~ 85 (334)
T 3tbh_A 7 KSKNVAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNTGV 85 (334)
T ss_dssp TTTSCCSSGGGGSSCCCEEECCTT-CCSSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHH
T ss_pred hHHHHHHHHHHhcCCCCeEECCcc-cCCCCEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCHHHH
Confidence 445678899999999999999999 7788999999999999999999999999999999998888754469999999999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372 83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET 162 (210)
Q Consensus 83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t 162 (210)
|+|++|+.+|++|++|+|++++..|++.++.+||+|+.++.+.+++++.+.+++++++.++++|++||+||.|+..||.|
T Consensus 86 alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~np~n~~~g~~t 165 (334)
T 3tbh_A 86 SLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEET 165 (334)
T ss_dssp HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCchHHHHHHHHHHHhCCCEEECCccCChhHHHHHHHH
Confidence 99999999999999999999999999999999999999997656889999999999888789999999999998899999
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
++.||++|+++.||+||+|+|+||+++|++.++|+.+|+++||||..
T Consensus 166 ~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~ 212 (334)
T 3tbh_A 166 TGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEP 212 (334)
T ss_dssp HHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEee
Confidence 99999999977899999999999999999999999999999999963
No 4
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=100.00 E-value=2.9e-52 Score=353.49 Aligned_cols=204 Identities=40% Similarity=0.626 Sum_probs=191.8
Q ss_pred hhhhhHhhhccccCCceeecccccCC-------CCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeC
Q 028372 4 NNAIKRDVTELIGNTPMVYLNNVVDG-------CVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVT 76 (210)
Q Consensus 4 ~~~~~~~i~~~~~~TPl~~~~~l~~~-------~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~s 76 (210)
+|.++++|.+.+++|||++++++++. .|.+||+|+|++|||||||+|++.+++.++.++|.++++ .+|+++|
T Consensus 2 ~~~~~~~i~~~ig~TPL~~~~~l~~~~~~~~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~l~~~-~~vv~aS 80 (325)
T 3dwg_A 2 HMTRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPG-ATILEPT 80 (325)
T ss_dssp CCCEESSTGGGCSCCCEEECTTTSSBSSCBTTBCCEEEEEEETTSSTTSBTTHHHHHHHHHHHHHTTCCCTT-CEEEEEC
T ss_pred CcccccCHHHhcCCCCcEEccccchhhcccccCCCcEEEEEECCCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeC
Confidence 46678899999999999999999887 678999999999999999999999999999999988876 6799999
Q ss_pred CCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhH
Q 028372 77 SGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANP 156 (210)
Q Consensus 77 sGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~ 156 (210)
+||||+|+|++|+.+|++|++|+|++++..|+++++.+||+|+.++.+.+++++.+.+++++++.++++|++||+||.++
T Consensus 81 sGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~np~~~ 160 (325)
T 3dwg_A 81 SGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANT 160 (325)
T ss_dssp SSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECSTTTHHHHHHHHHHHHHHCTTSBCCCTTTCHHHH
T ss_pred CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEeCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999998667899999999999988669999999999997
Q ss_pred HHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 157 KIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 157 ~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
..||.|++.||++|+++ ||+||+|+|+||+++|++.++|+.+|+++||||..
T Consensus 161 ~~g~~t~~~Ei~~q~~~-~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~ 212 (325)
T 3dwg_A 161 DSHYCGTGPELLADLPE-ITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP 212 (325)
T ss_dssp HHHHHTHHHHHHHHCTT-CCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCC-CCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEee
Confidence 78999999999999964 99999999999999999999999999999999863
No 5
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=100.00 E-value=3.5e-52 Score=352.61 Aligned_cols=203 Identities=68% Similarity=1.121 Sum_probs=191.7
Q ss_pred hhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028372 7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAF 86 (210)
Q Consensus 7 ~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~ 86 (210)
+++++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++.++.++|.++|+..+|+++|+||||+|+|+
T Consensus 5 ~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~assGN~g~alA~ 84 (322)
T 1z7w_A 5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAF 84 (322)
T ss_dssp CCSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHH
T ss_pred hhhHHHHhcCCCCeEECccccccCCceEEEEecccCCCCchHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCCHHHHHHHH
Confidence 57889999999999999999988888999999999999999999999999999999998888778999999999999999
Q ss_pred HHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHH
Q 028372 87 IAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPE 166 (210)
Q Consensus 87 ~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E 166 (210)
+|+.+|++|++|+|+++++.|+++++.+||+|+.++.+.+++++.+.+++++++.++++|++||+|+.|+..||.|++.|
T Consensus 85 aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~n~~~~~~g~~t~~~E 164 (322)
T 1z7w_A 85 TAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPE 164 (322)
T ss_dssp HHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHHH
T ss_pred HHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCeEeCCCCCChhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999975457889999999999887899999999999987899999999
Q ss_pred HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 167 IWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 167 i~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
|++|++++||+||+|+|+||+++|++.++|+.+|+++||+|..
T Consensus 165 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~ 207 (322)
T 1z7w_A 165 IWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEP 207 (322)
T ss_dssp HHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEec
Confidence 9999976899999999999999999999999999999999964
No 6
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=100.00 E-value=7.6e-51 Score=341.76 Aligned_cols=199 Identities=45% Similarity=0.718 Sum_probs=186.2
Q ss_pred HhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028372 9 RDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA 88 (210)
Q Consensus 9 ~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a 88 (210)
+++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++.++.++|.++++ .+|+++|+||||+|+|++|
T Consensus 2 ~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~g-~~vv~~ssGN~g~a~A~~a 80 (303)
T 2v03_A 2 STLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG-DVLIEATSGNTGIALAMIA 80 (303)
T ss_dssp CSGGGGSSCCCEEECSSSSCSSSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECSSHHHHHHHHHH
T ss_pred cchHhhcCCCCcEECcccccccCCEEEEEeccCCCCCCcHHHHHHHHHHHHHHcCCCCCC-CEEEEECCcHHHHHHHHHH
Confidence 467889999999999999988889999999999999999999999999999999987776 6799999999999999999
Q ss_pred HHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHH
Q 028372 89 AARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIW 168 (210)
Q Consensus 89 ~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~ 168 (210)
+.+|++|++|+|++++..|+++++.+||+|+.++.+.+++++.+.+++++++.+++ |++||+||.++..||.|++.||+
T Consensus 81 ~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~n~~~~~~g~~t~~~Ei~ 159 (303)
T 2v03_A 81 ALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGK-LLDQFNNPDNPYAHYTTTGPEIW 159 (303)
T ss_dssp HHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHTTSCE-ECCTTTCTHHHHHHHHTHHHHHH
T ss_pred HHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCc-ccCCcCChhhHHHhcCCcHHHHH
Confidence 99999999999999999999999999999999997656899999999998885577 99999999997779999999999
Q ss_pred HhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 169 QDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 169 ~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
+|++++||+||+|+|+||+++|++.++|+.+|+++||+|..
T Consensus 160 ~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~ 200 (303)
T 2v03_A 160 QQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP 200 (303)
T ss_dssp HHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred HHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcC
Confidence 99976799999999999999999999999999999999964
No 7
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=100.00 E-value=3.7e-51 Score=345.41 Aligned_cols=201 Identities=44% Similarity=0.732 Sum_probs=186.9
Q ss_pred hhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028372 6 AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA 85 (210)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA 85 (210)
.+++++.+.+++|||++++++ + .|.+||+|+|++|||||||+|++.+++..+.++|.++++ .+|+++|+||||+|+|
T Consensus 2 ~~~~~i~~~~~~TPL~~l~~l-~-~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~~-~~vv~~ssGN~g~a~A 78 (316)
T 1y7l_A 2 AIYADNSYSIGNTPLVRLKHF-G-HNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKG-KEIVDATSGNTGIALA 78 (316)
T ss_dssp CCCSSGGGGCCCCCEEECSSS-S-STTCEEEEETTSSGGGBTHHHHHHHHHHHHHHTTSSCTT-CEEEESCCSHHHHHHH
T ss_pred cchhhhHHhcCCCCcEECccC-C-CCCEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCcHHHHHHH
Confidence 356789999999999999999 6 788999999999999999999999999999999987776 6799999999999999
Q ss_pred HHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCe-EEcCCCCCChhHHHHHHhHH
Q 028372 86 FIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDG-YLLRQFENPANPKIHYETTG 164 (210)
Q Consensus 86 ~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~n~~~~~~g~~t~~ 164 (210)
++|+.+|++|++|+|++++..|+++|+.+||+|+.++.+.+++++.+.+++++++.+++ ||++||+||.++..||.|++
T Consensus 79 ~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~ 158 (316)
T 1y7l_A 79 YVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTG 158 (316)
T ss_dssp HHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHH
T ss_pred HHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEECCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997545888999999999887666 88999999999878999999
Q ss_pred HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCCEEEEEEe
Q 028372 165 PEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVVLRVL 209 (210)
Q Consensus 165 ~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~-~~~~vigv~~ 209 (210)
.||++|++++||+||+|+|+||+++|++.++|+.+ |+++||+|..
T Consensus 159 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~ 204 (316)
T 1y7l_A 159 PEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEP 204 (316)
T ss_dssp HHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEE
T ss_pred HHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEec
Confidence 99999997669999999999999999999999998 9999999964
No 8
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=100.00 E-value=1.3e-50 Score=341.70 Aligned_cols=204 Identities=49% Similarity=0.796 Sum_probs=189.6
Q ss_pred hhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028372 5 NAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGL 84 (210)
Q Consensus 5 ~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~al 84 (210)
+.+++++.+.+++|||++++++++..+.+||+|+|++|||||||+|++.+++..+.++|.++++ .+|+++|+||||+|+
T Consensus 4 ~~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g-~~vv~assGN~g~al 82 (313)
T 2q3b_A 4 MSIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPD-TIILEPTSGNTGIAL 82 (313)
T ss_dssp CCCCSSGGGGSCCCCEEECSSSCTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECSSHHHHHH
T ss_pred cchhhhHHHhcCCCceEECcccccccCcEEEEEehhcCCCCcHHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHH
Confidence 4567889999999999999999888889999999999999999999999999999999987776 579999999999999
Q ss_pred HHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHH
Q 028372 85 AFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTG 164 (210)
Q Consensus 85 A~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~ 164 (210)
|++|+.+|++|++|+|++++..|+++++.+||+|+.++.+.+++++.+.+++++++.+..++++||+||.++..||.|++
T Consensus 83 A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~~~~~~~~t~~ 162 (313)
T 2q3b_A 83 AMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTA 162 (313)
T ss_dssp HHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEECCCTTTCTHHHHHHHHTHH
T ss_pred HHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHHHHhCCCEEeCCCCCChhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999755588999999999998855588999999999767899999
Q ss_pred HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 165 PEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 165 ~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
.||++|+++++|+||+|+|+||+++|++.++|+.+|+++||+|..
T Consensus 163 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~ 207 (313)
T 2q3b_A 163 EEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEP 207 (313)
T ss_dssp HHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEee
Confidence 999999976799999999999999999999999999999999964
No 9
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=100.00 E-value=2.1e-50 Score=344.40 Aligned_cols=204 Identities=39% Similarity=0.651 Sum_probs=189.1
Q ss_pred hhhhhHhhhccccCCceeecccccC----CCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCc
Q 028372 4 NNAIKRDVTELIGNTPMVYLNNVVD----GCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGN 79 (210)
Q Consensus 4 ~~~~~~~i~~~~~~TPl~~~~~l~~----~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN 79 (210)
...+++++...+++|||++++++++ ..|.+||+|+|++|||||||+|++.+++..+.++|.++++ .+|+++|+||
T Consensus 10 ~~~~~~~i~~~~g~TPL~~~~~l~~~~~~~~g~~v~~K~E~~~ptGSfKdR~a~~~l~~a~~~g~~~~g-~~vv~aSsGN 88 (343)
T 2pqm_A 10 RKRIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPG-MEIIESTSGN 88 (343)
T ss_dssp CCCEESSGGGGSSCCCEEECCGGGCSTTSCTTCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTSSCTT-CEEEEECSSH
T ss_pred chhHHHHHHhhcCCCCeEECCccccccccccCcEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEECCcH
Confidence 3456788999999999999999987 7788999999999999999999999999999999987776 5799999999
Q ss_pred hHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCe-EEcCCCCCChhHHH
Q 028372 80 TGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDG-YLLRQFENPANPKI 158 (210)
Q Consensus 80 ~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~n~~~~~~ 158 (210)
||+|+|++|+.+|++|++|+|++++..|+++++.+||+|+.++.+.+++++.+.+++++++.+.. |+++||+||.|++.
T Consensus 89 ~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~n~~n~~~ 168 (343)
T 2pqm_A 89 TGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAA 168 (343)
T ss_dssp HHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTTEEECCTTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCcEEECCCCCChhHHHH
Confidence 99999999999999999999999999999999999999999997545888999999999887665 78899999999888
Q ss_pred HHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 159 HYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 159 g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
||.|++ ||++|++++||+||+|+|+||+++|++.++|+.+|+++||+|..
T Consensus 169 g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~ 218 (343)
T 2pqm_A 169 HHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEP 218 (343)
T ss_dssp HHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEec
Confidence 999999 99999976799999999999999999999999999999999964
No 10
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=100.00 E-value=1.4e-50 Score=340.72 Aligned_cols=201 Identities=50% Similarity=0.784 Sum_probs=174.1
Q ss_pred hhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028372 7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAF 86 (210)
Q Consensus 7 ~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~ 86 (210)
+++++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++..+.++|.++++ .+|+++|+||||+|+|+
T Consensus 4 ~~~~i~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g-~~vv~assGN~g~a~A~ 82 (308)
T 2egu_A 4 TVNSITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKPG-DTIVEPTSGNTGIGLAM 82 (308)
T ss_dssp CCSCGGGGSSCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCeEECCcccccCCCEEEEEecccCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHHHH
Confidence 46788999999999999999888889999999999999999999999999999999987776 57999999999999999
Q ss_pred HHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHH
Q 028372 87 IAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPE 166 (210)
Q Consensus 87 ~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E 166 (210)
+|+.+|++|++|+|++++..|+++++.+||+|+.++.+.+++++.+.+++++++. ++++++||+||.++..||.|++.|
T Consensus 83 ~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~~~~g~~t~~~E 161 (308)
T 2egu_A 83 VAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGAQGMRGAIAKAEELVREH-GYFMPQQFKNEANPEIHRLTTGKE 161 (308)
T ss_dssp HHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCC--------------CHHHH
T ss_pred HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHHC-cCCcCCcCCChhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997545788999999998887 458889999999877899999999
Q ss_pred HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 167 IWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 167 i~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
|++|++++||+||+|+|+||+++|++.++|+.+|+++||+|..
T Consensus 162 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~ 204 (308)
T 2egu_A 162 IVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEP 204 (308)
T ss_dssp HHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEe
Confidence 9999976799999999999999999999999999999999864
No 11
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=100.00 E-value=5.6e-50 Score=336.55 Aligned_cols=197 Identities=48% Similarity=0.807 Sum_probs=183.2
Q ss_pred hhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCe--EEEeeCCCchHHHHHHHH
Q 028372 11 VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKT--TLIEVTSGNTGVGLAFIA 88 (210)
Q Consensus 11 i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~--~vv~~ssGN~g~alA~~a 88 (210)
|.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++.++.++|.++++ + +|+++|+||||+|+|++|
T Consensus 3 i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~g-~~~~vv~assGN~g~a~A~~a 81 (304)
T 1ve1_A 3 VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPG-SGQVIVEPTSGNTGIGLAMIA 81 (304)
T ss_dssp GGGGCCCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTT-SCCEEEESCCSHHHHHHHHHH
T ss_pred hHHhcCCCCcEECcccccccCCEEEEEecccCCCCcHHHHHHHHHHHHHHHcCCCCCC-CccEEEEeCCcHHHHHHHHHH
Confidence 5678999999999999988889999999999999999999999999999999987776 4 799999999999999999
Q ss_pred HHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHH
Q 028372 89 AARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIW 168 (210)
Q Consensus 89 ~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~ 168 (210)
+.+|++|++|+|++++..|+++++.+||+|+.++.+.+++++.+.+++++++ ++++|++||+||.++..||.|++.||+
T Consensus 82 ~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~~~~~~~~~~a~~l~~~-~~~~~~~~~~n~~~~~g~~~t~~~Ei~ 160 (304)
T 1ve1_A 82 ASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEE-LGAFMPDQFKNPANVRAHYETTGPELY 160 (304)
T ss_dssp HHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH-HTCBCCCTTTCHHHHHHHHHTHHHHHH
T ss_pred HHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHhc-CCCEeCCCCCChhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999765588999999999887 478999999999996556899999999
Q ss_pred HhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 169 QDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 169 ~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
+|+++++|+||+|+|+||+++|++.++|+.+|+++||+|..
T Consensus 161 ~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~ 201 (304)
T 1ve1_A 161 EALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEP 201 (304)
T ss_dssp HHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred HHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEec
Confidence 99976799999999999999999999999999999999964
No 12
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=100.00 E-value=9.9e-50 Score=340.58 Aligned_cols=201 Identities=22% Similarity=0.292 Sum_probs=182.5
Q ss_pred chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372 3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV 82 (210)
Q Consensus 3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~ 82 (210)
++..+++++.+.+++|||+++++|++..|.+||+|+|++|||||||+|++.+++.++.++|..+. .++|+++|+||||+
T Consensus 11 ~i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~-~~~vv~~SsGNhg~ 89 (346)
T 3l6b_A 11 DVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERK-PKAVVTHSSGNHGQ 89 (346)
T ss_dssp HHHHHHHHHGGGSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHTTC-----CC-CSCEEEECSSHHHH
T ss_pred HHHHHHHHHhcccCCCCeEEchhhHHHhCCeEEEEeCCCCCCCCcHHHHHHHHHHHHHHhccccC-CCEEEEeCCCHHHH
Confidence 45678999999999999999999988888999999999999999999999999999988764433 25699999999999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372 83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET 162 (210)
Q Consensus 83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t 162 (210)
|+|++|+.+|++|++|+|++++..|++.++.+||+|+.++++ ++++.+.+++++++. +++|++||+||.+ +.||.|
T Consensus 90 a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~~--~~~~~~~a~~l~~~~-~~~~i~~~~np~~-~~g~~t 165 (346)
T 3l6b_A 90 ALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPS--DESRENVAKRVTEET-EGIMVHPNQEPAV-IAGQGT 165 (346)
T ss_dssp HHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECSS--HHHHHHHHHHHHHHH-TCEECCSSSCHHH-HHHHHH
T ss_pred HHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEECCCCChHH-HHHHHH
Confidence 999999999999999999999999999999999999999864 788999999998887 6899999999997 789999
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
++.||++|+ +.+|+||+|+||||+++|++.++|+.+|+++||||..
T Consensus 166 ~~~Ei~~q~-~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~ 211 (346)
T 3l6b_A 166 IALEVLNQV-PLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEP 211 (346)
T ss_dssp HHHHHHHHS-TTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHhC-CCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEec
Confidence 999999999 5799999999999999999999999999999999963
No 13
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=100.00 E-value=5e-49 Score=344.28 Aligned_cols=203 Identities=44% Similarity=0.663 Sum_probs=183.0
Q ss_pred hhhHhhhccccCCceeecccccCCCC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028372 6 AIKRDVTELIGNTPMVYLNNVVDGCV--ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVG 83 (210)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~~~~--~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~a 83 (210)
.+++++.+.+++|||+++++|++.+| .+||+|+|++|||||||+|++.+++.++.++|.++++ .+||++|+||||+|
T Consensus 97 ~~~~~i~~~ig~TPLv~l~~Ls~~~G~~~~v~lK~E~~nptGSfKdR~a~~~i~~a~~~G~l~~g-~tVV~aSsGN~G~A 175 (435)
T 1jbq_A 97 KILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPG-DTIIEPTSGNTGIG 175 (435)
T ss_dssp SEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSCTT-CEEEEECSSHHHHH
T ss_pred hHHHHHHhhCCCCCeEECcchhhHhCCCceEEEEECCCCCcCCHHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHH
Confidence 35677899999999999999887766 6999999999999999999999999999999988876 67999999999999
Q ss_pred HHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHH---HHHHHHHHHHhCCCeEEcCCCCCChhHHHHH
Q 028372 84 LAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEE---ILEKGEEILKKTPDGYLLRQFENPANPKIHY 160 (210)
Q Consensus 84 lA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~ 160 (210)
+|++|+.+|++|++|||++++..|+++++.+||+|+.++.+.++++ ..+.+++++++.++.||++||+|+.|+..||
T Consensus 176 lA~aaa~~Gi~~~IvmP~~~s~~k~~~l~~~GAeVv~v~~~~~~d~~~~~~~~a~~la~~~~~~~~i~q~~n~~n~~ag~ 255 (435)
T 1jbq_A 176 LALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHY 255 (435)
T ss_dssp HHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHH
T ss_pred HHHHHHHcCCeEEEEeCCCCCHHHHHHHHhCCCEEEEecCCCCcchHHHHHHHHHHHHHhcCCeEEeCccCCcccHHHHH
Confidence 9999999999999999999999999999999999999986444554 4567888888877889999999999989999
Q ss_pred HhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 161 ETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 161 ~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
.|++.||++|+++++|+||+|+|+||+++|++.++|+.+|+++||||..
T Consensus 256 ~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep 304 (435)
T 1jbq_A 256 DTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP 304 (435)
T ss_dssp HTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEec
Confidence 9999999999976799999999999999999999999999999999964
No 14
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=100.00 E-value=9.6e-49 Score=328.97 Aligned_cols=194 Identities=45% Similarity=0.675 Sum_probs=178.7
Q ss_pred hHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372 8 KRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI 87 (210)
Q Consensus 8 ~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~ 87 (210)
+..+.+.+++|||+++++++ .+||+|+|++|||||||+|++.+++..+.++|.+++ .|+++|+||||+|+|++
T Consensus 11 ~~~~~~~~~~TPL~~l~~l~----~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~---~vv~aSsGN~g~a~A~a 83 (303)
T 1o58_A 11 HHMMERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKN---GIVEPTSGNMGIAIAMI 83 (303)
T ss_dssp CCHHHHHSCCCCEEECTTTC----TTEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCTT---CEEEECSSHHHHHHHHH
T ss_pred hhhhhhccCCCCeEECccCC----ceEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCCC---CEEEECchHHHHHHHHH
Confidence 44578889999999999886 589999999999999999999999999999887554 39999999999999999
Q ss_pred HHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHH
Q 028372 88 AAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEI 167 (210)
Q Consensus 88 a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei 167 (210)
|+.+|++|++|+|+++++.|+++++.+||+|+.++++.+++++.+.+++++++. +++|++||+||.++..||.|++.||
T Consensus 84 a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~~g~~t~~~Ei 162 (303)
T 1o58_A 84 GAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEI 162 (303)
T ss_dssp HHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCCCTTTCHHHHHHHHHTHHHHH
T ss_pred HHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhc-CeEeCCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999997545889999999998887 6888999999999878999999999
Q ss_pred HHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCC-CEEEEEEe
Q 028372 168 WQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPD-IKVVLRVL 209 (210)
Q Consensus 168 ~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~-~~vigv~~ 209 (210)
++|+++.||+||+|+|+||+++|++.++|+.+|+ ++||+|..
T Consensus 163 ~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~ 205 (303)
T 1o58_A 163 LKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEP 205 (303)
T ss_dssp HHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEE
T ss_pred HHHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEec
Confidence 9999766999999999999999999999999999 99999964
No 15
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=100.00 E-value=1.9e-48 Score=349.19 Aligned_cols=204 Identities=41% Similarity=0.662 Sum_probs=188.2
Q ss_pred hhhhHhhhccccCCceeecccccCCCC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372 5 NAIKRDVTELIGNTPMVYLNNVVDGCV--ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV 82 (210)
Q Consensus 5 ~~~~~~i~~~~~~TPl~~~~~l~~~~~--~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~ 82 (210)
..+++.+.+.+++|||++++++++.+| ++||+|+|++|||||||+|++.+++.+++++|.+++| .+|+++|+||||+
T Consensus 48 ~~~~~~i~~~ig~TPl~~l~~l~~~~g~~~~i~~K~E~~~ptGS~K~R~a~~~i~~a~~~g~~~~g-~~vv~~ssGN~g~ 126 (527)
T 3pc3_A 48 QQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPG-YTIIEPTSGNTGI 126 (527)
T ss_dssp CSSCSSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHHTCCCTT-CEEEEECSSHHHH
T ss_pred hhHHhhHHhhcCCCCcEEcchhhhhcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHH
Confidence 456788999999999999999987666 7999999999999999999999999999999998887 6799999999999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHH---HHHHHHHHHHHhCCCeEEcCCCCCChhHHHH
Q 028372 83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFE---EILEKGEEILKKTPDGYLLRQFENPANPKIH 159 (210)
Q Consensus 83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g 159 (210)
|+|++|+.+|++|++|+|++++..|++.++.+||+|+.++.+.+++ .+.+.+++++++.++.+|++||+||.|+..|
T Consensus 127 a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~n~~~g 206 (527)
T 3pc3_A 127 GLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAH 206 (527)
T ss_dssp HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTSCTTSTTSHHHHHHHHHHHSSSEECCCTTTCTHHHHHH
T ss_pred HHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCCCCCcccHHHHHHHHHHHHHhCCCcEecCCCCCcchHHHH
Confidence 9999999999999999999999999999999999999998753444 3667888998888788999999999998999
Q ss_pred HHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 160 YETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 160 ~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
|.|++.||++|+++.||+||+|+|+||+++|++.++|+.+|+++||||..
T Consensus 207 ~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~ 256 (527)
T 3pc3_A 207 YDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDP 256 (527)
T ss_dssp HHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEec
Confidence 99999999999977899999999999999999999999999999999863
No 16
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=100.00 E-value=2.3e-48 Score=334.12 Aligned_cols=193 Identities=21% Similarity=0.228 Sum_probs=177.6
Q ss_pred hHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372 8 KRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI 87 (210)
Q Consensus 8 ~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~ 87 (210)
+.+....+++|||+++++|++..|.+||+|+|++|||||||+|++.+++..+.++|. ++|+++|+||||+|+|++
T Consensus 37 ~~~~~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~-----~~vv~aSsGN~g~alA~a 111 (364)
T 4h27_A 37 MMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSSGNAGMAAAYA 111 (364)
T ss_dssp ----CCSSCCCCEEEEHHHHHHHTSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHHH
T ss_pred hhhcCCCCCcCCeEEChhhHHHhCCEEEEEeCCCCCCCCHHHHHHHHHHHHHHhcCC-----CEEEEeCCChHHHHHHHH
Confidence 445567789999999999988888899999999999999999999999999998775 789999999999999999
Q ss_pred HHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHH
Q 028372 88 AAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEI 167 (210)
Q Consensus 88 a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei 167 (210)
|+.+|++|++|+|++++..|+++++.+||+|+.++. +++++.+.+++++++.++++|++||+||.+ ..||.|++.||
T Consensus 112 a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~--~~~~a~~~a~~l~~~~~~~~~~~~~~np~~-~~G~~t~~~Ei 188 (364)
T 4h27_A 112 ARQLGVPATIVVPGTTPALTIERLKNEGATVKVVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPLI-WEGHASIVKEL 188 (364)
T ss_dssp HHHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECS--STTHHHHHHHHHHHHSTTEEEECSSCSHHH-HHHHTHHHHHH
T ss_pred HHHhCCceEEEECCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhCCCeEEeCCCCCHHH-HHHHHHHHHHH
Confidence 999999999999999999999999999999999985 478999999999998778999999999998 68999999999
Q ss_pred HHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCCEEEEEE
Q 028372 168 WQDSGGKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVVLRV 208 (210)
Q Consensus 168 ~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~-~~~~vigv~ 208 (210)
++|+++.||+||+|+|+||+++|++.++|+.+ |+++||+|.
T Consensus 189 ~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe 230 (364)
T 4h27_A 189 KETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAME 230 (364)
T ss_dssp HHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEE
T ss_pred HHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 99997679999999999999999999999886 899999985
No 17
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=100.00 E-value=7.2e-49 Score=334.82 Aligned_cols=198 Identities=25% Similarity=0.345 Sum_probs=181.3
Q ss_pred chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372 3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV 82 (210)
Q Consensus 3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~ 82 (210)
++..+++++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++.++.+++. ..+|+++|+||||+
T Consensus 26 ~i~~a~~~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdR~a~~~i~~a~~~~~----~~~vv~~ssGN~g~ 101 (342)
T 2gn0_A 26 DILEAKKRLAGKIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTEAEK----RKGVVACSAGNHAQ 101 (342)
T ss_dssp HHHHHHHHHTTTSCCCCCCBCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHHSCHHHH----HTCEEEECSSHHHH
T ss_pred HHHHHHHHHhhhcCCCCceEchhhHHHhCCEEEEEEccCCCcCChHHHHHHHHHHHHHHhcC----CCEEEEECCChHHH
Confidence 44578899999999999999999987778899999999999999999999999998753221 25699999999999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372 83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET 162 (210)
Q Consensus 83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t 162 (210)
|+|++|+.+|++|++|+|++++..|+++++.+||+|+.++++ ++++.+.+++++++. +++|++||+|+.+ ..||.|
T Consensus 102 alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~l~~~~-~~~~~~~~~n~~~-~~g~~t 177 (342)
T 2gn0_A 102 GVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDN--FNDTIAKVSEIVETE-GRIFIPPYDDPKV-IAGQGT 177 (342)
T ss_dssp HHHHHHHHHTCCEEEEECTTSCHHHHHHHHHHSCEEEECCSS--HHHHHHHHHHHHHHH-CCEECCSSSSHHH-HHHHHH
T ss_pred HHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEeCCCCCHHH-HHHHHH
Confidence 999999999999999999999999999999999999999864 889999999998876 7899999999998 689999
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
++.||++|++ .+|+||+|+||||+++|++.++|+.+|+++||+|..
T Consensus 178 ~~~Ei~~q~~-~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~ 223 (342)
T 2gn0_A 178 IGLEIMEDLY-DVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQA 223 (342)
T ss_dssp HHHHHHHHCT-TCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHHcC-CCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEe
Confidence 9999999995 799999999999999999999999999999999964
No 18
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=100.00 E-value=6.5e-48 Score=332.15 Aligned_cols=196 Identities=20% Similarity=0.215 Sum_probs=178.3
Q ss_pred hhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028372 6 AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA 85 (210)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA 85 (210)
..++++...+++|||+++++|++..|.+||+|+|++|||||||+|++.+++..+.++|. .+||++|+||||+|+|
T Consensus 35 ~~~p~~~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdRga~~~l~~a~~~g~-----~~vv~aSsGN~g~alA 109 (372)
T 1p5j_A 35 EFMMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSAGNAGMAAA 109 (372)
T ss_dssp -----CCCSSCCCCEEEEHHHHHHHTSCEEEECGGGSGGGBTTHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHH
T ss_pred HhcccccCCCCCCCceEcHhhHHHhCCEEEEEEcCCCCCCChHHHHHHHHHHHHHHcCC-----CEEEEeCCCHHHHHHH
Confidence 45566778899999999999887778899999999999999999999999999988763 7899999999999999
Q ss_pred HHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHH
Q 028372 86 FIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGP 165 (210)
Q Consensus 86 ~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~ 165 (210)
++|+.+|++|++|+|+++++.|+++++.+||+|+.+++ +++++.+.+++++++.++++|++||+||.+ ..||.|++.
T Consensus 110 ~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~a~~~a~~l~~~~~~~~~v~~~~n~~~-~~G~~t~~~ 186 (372)
T 1p5j_A 110 YAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPLI-WEGHASIVK 186 (372)
T ss_dssp HHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCS--CHHHHHHHHHHHHHHSTTEEECCSSCCHHH-HHHHTHHHH
T ss_pred HHHHHcCCcEEEEECCCCCHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhcCCcEEeCCCCCHHH-HhhHHHHHH
Confidence 99999999999999999999999999999999999986 489999999999988668999999999998 688899999
Q ss_pred HHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCCEEEEEEe
Q 028372 166 EIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVVLRVL 209 (210)
Q Consensus 166 Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~-~~~~vigv~~ 209 (210)
||++|+++.||+||+|+|+||+++|++.++|+.+ |+++||+|..
T Consensus 187 Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~ 231 (372)
T 1p5j_A 187 ELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMET 231 (372)
T ss_dssp HHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEE
T ss_pred HHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEec
Confidence 9999997679999999999999999999999986 9999999864
No 19
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=100.00 E-value=1.4e-48 Score=328.86 Aligned_cols=196 Identities=25% Similarity=0.291 Sum_probs=178.7
Q ss_pred chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372 3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV 82 (210)
Q Consensus 3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~ 82 (210)
++..+++++.+.+++|||++++++++..|.+||+|+|++|||||||||++.+++.++. + ..+|+++|+||||+
T Consensus 6 ~i~~a~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~i~~l~--~-----~~~vv~~ssGN~g~ 78 (311)
T 1ve5_A 6 DLYAAFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALE--N-----PKGLLAVSSGNHAQ 78 (311)
T ss_dssp HHHHHHHHHGGGSCCCCEEECHHHHHHTTSEEEEEEGGGSGGGBTHHHHHHHHHHHSS--S-----CCCEEEECSSHHHH
T ss_pred HHHHHHHHHhccCCCCCceechhhHHhhCCeEEEEecCCCCcCCcHHHHHHHHHHHhc--C-----CCeEEEECCCcHHH
Confidence 4567899999999999999999888777889999999999999999999999999876 2 25699999999999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372 83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET 162 (210)
Q Consensus 83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t 162 (210)
|+|++|+.+|++|++|+|++++..|+++++.+||+|+.++++ ++++.+.+++++++. +++|++||+|+.+ ..||.|
T Consensus 79 alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~n~~~-~~g~~t 154 (311)
T 1ve5_A 79 GVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGVT--AKNREEVARALQEET-GYALIHPFDDPLV-IAGQGT 154 (311)
T ss_dssp HHHHHHHHHTCCEEEECCCC--CCHHHHHHHTTCEEECTTCC--TTTHHHHHHHHHHHH-CCEECCSSSSHHH-HHHHHH
T ss_pred HHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CcEecCCCCCcch-hhhccH
Confidence 999999999999999999999999999999999999998864 678888888888876 7899999999998 679999
Q ss_pred HHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 163 TGPEIWQDSG---GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 163 ~~~Ei~~q~~---~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
++.||++|++ +.+|+||+|+|+||+++|++.++|+.+|+++||+|..
T Consensus 155 ~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~ 204 (311)
T 1ve5_A 155 AGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEP 204 (311)
T ss_dssp HHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 9999999995 6799999999999999999999999999999999964
No 20
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=100.00 E-value=1.1e-48 Score=331.20 Aligned_cols=198 Identities=19% Similarity=0.295 Sum_probs=178.6
Q ss_pred chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372 3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV 82 (210)
Q Consensus 3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~ 82 (210)
++..+++++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++..+.++. +.++|+++|+||||+
T Consensus 12 ~i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGS~KdRga~~~i~~~~~~~----~~~~vv~~ssGN~g~ 87 (323)
T 1v71_A 12 DVASASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEAQ----RKAGVLTFSSGNHAQ 87 (323)
T ss_dssp HHHHHHHHHTTTSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHTTCCHHH----HHHCEEECCSSHHHH
T ss_pred HHHHHHHHHhccCCCCCceEhHhhHHHhCCeEEEEecCCCCcCCHHHHHHHHHHHHHHHhc----CCCeEEEeCCCcHHH
Confidence 4457889999999999999999888777889999999999999999999999998654321 126799999999999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372 83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET 162 (210)
Q Consensus 83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t 162 (210)
|+|++|+.+|++|++|+|++.+..|++.++.+||+|+.++++ ++++.+.+++++++. +++|++||+||.+ ..||.|
T Consensus 88 alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~l~~~~-~~~~i~~~~n~~~-~~g~~t 163 (323)
T 1v71_A 88 AIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRY--KDDREKMAKEISERE-GLTIIPPYDHPHV-LAGQGT 163 (323)
T ss_dssp HHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEECTT--TTCHHHHHHHHHHHH-TCBCCCSSSSHHH-HHHHTH
T ss_pred HHHHHHHHcCCCEEEECCCCCcHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEecCCCCCcch-hhhHhH
Confidence 999999999999999999999999999999999999999975 566788888888776 6788999999998 689999
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
++.||++|++ .+|+||+|+||||+++|++.++|+.+|+++||||..
T Consensus 164 ~~~Ei~~q~~-~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~ 209 (323)
T 1v71_A 164 AAKELFEEVG-PLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEP 209 (323)
T ss_dssp HHHHHHHHHC-CCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHhcC-CCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9999999995 799999999999999999999999999999999964
No 21
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-47 Score=321.51 Aligned_cols=188 Identities=21% Similarity=0.232 Sum_probs=174.2
Q ss_pred ccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcC
Q 028372 13 ELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARG 92 (210)
Q Consensus 13 ~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g 92 (210)
..+.+|||++++++++..|.+||+|+|++|||||||+|++.+++.++.++|. .+|+++|+||||+|+|++|+.+|
T Consensus 3 ~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptgS~K~R~a~~~l~~a~~~g~-----~~vv~~ssGN~g~alA~~a~~~G 77 (318)
T 2rkb_A 3 PFHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKGC-----RHLVCSSGGNAGIAAAYAARKLG 77 (318)
T ss_dssp CSSCCCCEEEEHHHHHHHTSCEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----CEEEECCCSHHHHHHHHHHHHHT
T ss_pred CCCccCCceehHhhHHHhCCeEEEEecCCCCCCCHHHHHHHHHHHHHHHcCC-----CEEEEECCchHHHHHHHHHHHcC
Confidence 3568999999999887777899999999999999999999999999988763 78999999999999999999999
Q ss_pred CcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHhhC
Q 028372 93 YNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSG 172 (210)
Q Consensus 93 ~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~ 172 (210)
++|++|+|+++++.|+++|+.+||+|+.+++ +++++.+.+++++++. +++|++||+|+.+ ..||.|++.||++|++
T Consensus 78 ~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~--~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~-~~g~~t~~~Ei~~q~~ 153 (318)
T 2rkb_A 78 IPATIVLPESTSLQVVQRLQGEGAEVQLTGK--VWDEANLRAQELAKRD-GWENVPPFDHPLI-WKGHASLVQELKAVLR 153 (318)
T ss_dssp CCEEEEECTTCCHHHHHHHHHTTCEEEECCS--SHHHHHHHHHHHHHST-TEEECCSSCSHHH-HHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCcHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEeCCCCChhh-ccchhHHHHHHHHhcC
Confidence 9999999999999999999999999999986 4899999999998875 8999999999998 6788999999999997
Q ss_pred CCCCEEEEccCchhHHHHHHHHHHhcC-CCCEEEEEEe
Q 028372 173 GKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVVLRVL 209 (210)
Q Consensus 173 ~~~d~vv~pvG~Gg~~~Gi~~~~k~~~-~~~~vigv~~ 209 (210)
..||+||+|+|+||+++|++.++|+.+ |+++||+|..
T Consensus 154 ~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~ 191 (318)
T 2rkb_A 154 TPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMET 191 (318)
T ss_dssp SCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEE
T ss_pred CCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEec
Confidence 679999999999999999999999885 8999999864
No 22
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=100.00 E-value=2.2e-47 Score=338.60 Aligned_cols=191 Identities=26% Similarity=0.358 Sum_probs=177.6
Q ss_pred hhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028372 10 DVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAA 89 (210)
Q Consensus 10 ~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~ 89 (210)
++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++..+.+++. .++||++|+||||+|+|++|+
T Consensus 24 ~i~~~i~~TPL~~l~~Ls~~~g~~V~lK~E~lqPtgSfKdRgA~n~i~~l~~~~~----~~gVV~aSsGNhg~avA~aa~ 99 (514)
T 1tdj_A 24 PVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQK----AHGVITASAGNHAQGVAFSSA 99 (514)
T ss_dssp CGGGTCCCCCEEECHHHHHHTTSEEEEECGGGSTTSSSTHHHHHHHHHTTTTSSC----SSSCEEEECSSSHHHHHHHHH
T ss_pred hHhcccCCCCcEEchhhHHhhCCeEEEEECCCCCcccHHHHHHHHHHHHHHHhcC----CCEEEEECCcHHHHHHHHHHH
Confidence 6788999999999999988888999999999999999999999999998765442 356999999999999999999
Q ss_pred HcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHH
Q 028372 90 ARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQ 169 (210)
Q Consensus 90 ~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~ 169 (210)
.+|++|++|||.+++..|+++++.+||+|+.++. +++++.+.+++++++. +++|++||+||.+ ++||+|++.||++
T Consensus 100 ~lGi~~~IvmP~~~p~~Kv~~~r~~GAeVvlv~~--~~dda~~~a~ela~e~-g~~~v~pfdnp~~-iaGqgTig~EI~e 175 (514)
T 1tdj_A 100 RLGVKALIVMPTATADIKVDAVRGFGGEVLLHGA--NFDEAKAKAIELSQQQ-GFTWVPPFDHPMV-IAGQGTLALELLQ 175 (514)
T ss_dssp HTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCS--SHHHHHHHHHHHHHHH-CCEECCSSCCHHH-HHHHHHHHHHHHH
T ss_pred HcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhc-CCEeeCCCCCHHH-HHHHHHHHHHHHH
Confidence 9999999999999999999999999999999885 5899999999998886 7899999999998 6899999999999
Q ss_pred hhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 170 DSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 170 q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
|+++ +|+||+|+||||+++|++.++|+.+|+++||||..
T Consensus 176 Ql~~-~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep 214 (514)
T 1tdj_A 176 QDAH-LDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEA 214 (514)
T ss_dssp HCTT-CCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HCCC-CCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 9954 99999999999999999999999999999999964
No 23
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=100.00 E-value=4.1e-46 Score=318.77 Aligned_cols=192 Identities=21% Similarity=0.231 Sum_probs=176.8
Q ss_pred hHhhhccccCCceeec--ccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028372 8 KRDVTELIGNTPMVYL--NNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA 85 (210)
Q Consensus 8 ~~~i~~~~~~TPl~~~--~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA 85 (210)
.+++.+.+++|||+++ +++++..|.+||+|+|++|||||||+|++.+++.++.++|. .+|+++|+||||+|+|
T Consensus 19 ~~~v~~~~g~TPL~~~~~~~l~~~~g~~v~~K~E~~~ptgS~KdR~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA 93 (351)
T 3aey_A 19 TPVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGA-----QAVACASTGNTAASAA 93 (351)
T ss_dssp SCCCCSCCCCCCEEECCCCHHHHTTTCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----SEEEESCSSHHHHHHH
T ss_pred CCceecCCCCCCeeecCchhhHHHhCCeEEEEecCCCCcccHHHHHHHHHHHHHHhcCC-----CEEEEeCCCHHHHHHH
Confidence 3578999999999999 88887788899999999999999999999999999998875 7899999999999999
Q ss_pred HHHHHcCCcEEEEEcCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHH
Q 028372 86 FIAAARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTG 164 (210)
Q Consensus 86 ~~a~~~g~~~~vvvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~ 164 (210)
++|+.+|++|++|+|++ ++..|+++|+.+||+|+.++++ ++++.+.+++++++. +++|+++ +|+.+ ..||.|++
T Consensus 94 ~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~~--~~~~~~~a~~l~~~~-~~~~~~~-~n~~~-~~g~~t~~ 168 (351)
T 3aey_A 94 AYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGN--FDDALRLTQKLTEAF-PVALVNS-VNPHR-LEGQKTLA 168 (351)
T ss_dssp HHHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHS-SEEECST-TCHHH-HHHHHHHH
T ss_pred HHHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CcEecCC-CCccc-eeeeeeHH
Confidence 99999999999999998 9999999999999999999964 889999999998887 5888888 88988 68999999
Q ss_pred HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC------CCEEEEEEe
Q 028372 165 PEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP------DIKVVLRVL 209 (210)
Q Consensus 165 ~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~------~~~vigv~~ 209 (210)
.||++|++..||+||+|+|+||+++|++.++|+.+| .++||+|..
T Consensus 169 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~ 219 (351)
T 3aey_A 169 FEVVDELGDAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQA 219 (351)
T ss_dssp HHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHHTSCSSCCEEEEEEE
T ss_pred HHHHHHcCCCCCEEEEecCchHHHHHHHHHHHHHHhccccCCCCeEEEEec
Confidence 999999976799999999999999999999998754 789999864
No 24
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.4e-46 Score=320.31 Aligned_cols=193 Identities=25% Similarity=0.276 Sum_probs=177.3
Q ss_pred hHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372 8 KRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI 87 (210)
Q Consensus 8 ~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~ 87 (210)
.+++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++.++.++|. .+|+++|+||||+|+|++
T Consensus 29 ~~~v~~~~g~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~l~~a~~~g~-----~~vv~aSsGN~g~alA~~ 103 (360)
T 2d1f_A 29 WTPVTLLEGGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDALAHGQ-----RAVLCASTGNTSASAAAY 103 (360)
T ss_dssp CCCCCCCCCCCCEEECHHHHHHHSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----SEEEECCSSHHHHHHHHH
T ss_pred CCccccccCCCCCeechhhHHHhCCeEEEEECCCCCCcCHHHHHHHHHHHHHHHCCC-----CEEEEeCCcHHHHHHHHH
Confidence 356888999999999999987778899999999999999999999999999998875 789999999999999999
Q ss_pred HHHcCCcEEEEEcCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHH
Q 028372 88 AAARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPE 166 (210)
Q Consensus 88 a~~~g~~~~vvvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E 166 (210)
|+.+|++|++|+|++ ++..|+++++.+||+|+.++++ ++++.+.+++++++.++.+|+++ +|+.+ ..||.|++.|
T Consensus 104 a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~--~~~~~~~a~~l~~~~~~~~~i~~-~n~~~-~~g~~t~~~E 179 (360)
T 2d1f_A 104 AARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDGN--FDDCLELARKMAADFPTISLVNS-VNPVR-IEGQKTAAFE 179 (360)
T ss_dssp HHHHTCEEEEEECSSCCCHHHHHHHHHTTCEEEEBSSC--HHHHHHHHHHHHHHCTTEEECST-TCHHH-HHHHTHHHHH
T ss_pred HHHcCCcEEEEEcCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhcCCeEEcCC-CChhh-hhhHHHHHHH
Confidence 999999999999998 9999999999999999999964 89999999999988855889988 88988 6799999999
Q ss_pred HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC------CCEEEEEEe
Q 028372 167 IWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP------DIKVVLRVL 209 (210)
Q Consensus 167 i~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~------~~~vigv~~ 209 (210)
|++|++..||+||+|+|+||+++|++.++|+.+| .++||+|..
T Consensus 180 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~ 228 (360)
T 2d1f_A 180 IVDVLGTAPDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQA 228 (360)
T ss_dssp HHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEE
T ss_pred HHHHcCCCCCEEEEeCCchHHHHHHHHHHHHHHhccccccCceEEEEec
Confidence 9999976799999999999999999999998754 689999863
No 25
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=100.00 E-value=8.9e-47 Score=324.55 Aligned_cols=192 Identities=24% Similarity=0.335 Sum_probs=176.6
Q ss_pred HhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028372 9 RDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA 88 (210)
Q Consensus 9 ~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a 88 (210)
+++.+.+++|||++++++++.+|.+||+|+|++|||||||||++.+++.++.+++. ..+|+++|+||||+|+|++|
T Consensus 52 ~~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfKdRga~~~i~~l~~~~~----~~~vv~assGN~g~a~A~aa 127 (366)
T 3iau_A 52 SPVYDVAIESPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLSREEL----DKGVITASAGNHAQGVALAG 127 (366)
T ss_dssp CCGGGTCCCCCEEECHHHHHHHTSEEEEEEGGGSTTSBTTHHHHHHHHHTSCHHHH----HHCEEEECSSHHHHHHHHHH
T ss_pred HHHhhhcCCCCcEEhhhhhHhhCCEEEEEecCCCCCcchHHHHHHHHHHHHHHhCC----CCEEEEeCCCHHHHHHHHHH
Confidence 35678899999999999988888899999999999999999999999987643321 25699999999999999999
Q ss_pred HHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHH
Q 028372 89 AARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIW 168 (210)
Q Consensus 89 ~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~ 168 (210)
+.+|++|++|+|++++..|+++++.+||+|+.+++ +++++++.+++++++. +++|++||+|+.+ +.||.|++.||+
T Consensus 128 ~~~G~~~~iv~P~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~~~~~~-~~~~i~~~~n~~~-i~g~~t~~~Ei~ 203 (366)
T 3iau_A 128 QRLNCVAKIVMPTTTPQIKIDAVRALGGDVVLYGK--TFDEAQTHALELSEKD-GLKYIPPFDDPGV-IKGQGTIGTEIN 203 (366)
T ss_dssp HHTTCCEEEEECTTCCHHHHHHHHHTTCEEEECCS--SHHHHHHHHHHHHHHH-TCEECCSSSSHHH-HHHHHHHHHHHH
T ss_pred HHhCCceEEEeCCCCCHHHHHHHHHCCCeEEEECc--CHHHHHHHHHHHHHhc-CCEecCCCCChHH-HHHHHHHHHHHH
Confidence 99999999999999999999999999999999984 5899999999998887 7999999999998 689999999999
Q ss_pred HhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 169 QDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 169 ~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
+|+ +.+|+||+|+|+||+++|++.++|+.+|++++|+|..
T Consensus 204 ~q~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~ 243 (366)
T 3iau_A 204 RQL-KDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEP 243 (366)
T ss_dssp HHC-CSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred Hhc-CCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEee
Confidence 999 6899999999999999999999999999999999863
No 26
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=100.00 E-value=4.4e-46 Score=318.69 Aligned_cols=192 Identities=22% Similarity=0.236 Sum_probs=176.5
Q ss_pred hHhhhccccCCceeecccccCCCCce--EEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028372 8 KRDVTELIGNTPMVYLNNVVDGCVAR--IAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA 85 (210)
Q Consensus 8 ~~~i~~~~~~TPl~~~~~l~~~~~~~--i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA 85 (210)
.+++.+.+++|||++++++++..|.+ ||+|+|++|||||||+|++.+++.++.++|. .+|+++|+||||+|+|
T Consensus 21 ~~~v~~~~g~TPL~~~~~l~~~~g~~~~i~~K~E~~~ptGS~KdR~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA 95 (352)
T 2zsj_A 21 TPIVTLYEGNTPLIEADNLARAIGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAVEAGK-----RAVICASTGNTSASAA 95 (352)
T ss_dssp CCCCCCCCCCCCEEECHHHHHHHTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHH
T ss_pred CCceecccCCCCCeehHHHHHHhCCCceEEEEECCCCCCccHHHHHHHHHHHHHHhcCC-----CEEEEeCCchHHHHHH
Confidence 46788999999999999988777777 9999999999999999999999999998875 7899999999999999
Q ss_pred HHHHHcCCcEEEEEcCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHH
Q 028372 86 FIAAARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTG 164 (210)
Q Consensus 86 ~~a~~~g~~~~vvvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~ 164 (210)
++|+.+|++|++|+|++ ++..|+++++.+||+|+.+++ +++++.+.+++++++. +++|+++ +|+.+ ..||.|++
T Consensus 96 ~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~--~~~~~~~~a~~l~~~~-~~~~~~~-~n~~~-~~g~~t~~ 170 (352)
T 2zsj_A 96 AYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQG--TFDDALNIVRKIGENF-PVEIVNS-VNPYR-IEGQKTAA 170 (352)
T ss_dssp HHHHHHTCEEEEEEEGGGCCHHHHHHHHHTTCEEEEESS--CHHHHHHHHHHHHHHS-SEEECST-TCTHH-HHHHTHHH
T ss_pred HHHHhcCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHHc-CcEECCC-CCcch-hhhHhHHH
Confidence 99999999999999998 999999999999999999996 4899999999998887 5888887 89998 68999999
Q ss_pred HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC------CCEEEEEEe
Q 028372 165 PEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP------DIKVVLRVL 209 (210)
Q Consensus 165 ~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~------~~~vigv~~ 209 (210)
.||++|++..||+||+|+|+||+++|++.++|+.+| .++||+|..
T Consensus 171 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~ 221 (352)
T 2zsj_A 171 FEICDTLGEAPDYHFIPVGNAGNITAYWKGFKIYYEEGKITKLPRMMGWQA 221 (352)
T ss_dssp HHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEE
T ss_pred HHHHHHcCCCCCEEEEeCCCcHHHHHHHHHHHHHHhcCCCCCCCEEEEEec
Confidence 999999976799999999999999999999998754 689999864
No 27
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=100.00 E-value=8e-46 Score=313.95 Aligned_cols=199 Identities=23% Similarity=0.220 Sum_probs=177.7
Q ss_pred hhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCCch
Q 028372 5 NAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEP--CSSVKDRIAYSMIKDAEDKGLITPGKTTLIEV--TSGNT 80 (210)
Q Consensus 5 ~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~p--tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~--ssGN~ 80 (210)
+..++++.+.+++|||++++++++..|.+||+|+|++|| +||||+|.+.+++.+++++|. ++||++ |+|||
T Consensus 9 l~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~p~~~gs~K~R~~~~~i~~a~~~G~-----~~vv~~G~ssGN~ 83 (325)
T 1j0a_A 9 LAKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGA-----DVVITVGAVHSNH 83 (325)
T ss_dssp HTTCCCCCCCCSCCCEEECHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTC-----SEEEEECCTTCHH
T ss_pred hccCCCcccccCCCCceEhhhhhhhhCCEEEEEecccCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcchHH
Confidence 356778999999999999998887778899999999999 999999999999999999885 678886 99999
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECCCCCH---HHHHHHHHHHHHhCCCe-EEcCCCCCChh
Q 028372 81 GVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADSALRF---EEILEKGEEILKKTPDG-YLLRQFENPAN 155 (210)
Q Consensus 81 g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~~~~~---~~~~~~a~~~~~~~~~~-~~~~~~~n~~~ 155 (210)
|+|+|++|+.+|++|++|||++. +..|++.++.+||+|+.++.+.+. +++.+.+++++++.+.. ++.+++.|+.+
T Consensus 84 g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~n~~~ 163 (325)
T 1j0a_A 84 AFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIG 163 (325)
T ss_dssp HHHHHHHHHHTTCEEEEEEESCCCSCHHHHHHHHTTCEEEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGCSHHH
T ss_pred HHHHHHHHHHhCCcEEEEECCCCCCCchHHHHHHCCCEEEEeCcchhhhhhHHHHHHHHHHHHcCCceEEEcCCCCCHHH
Confidence 99999999999999999999999 999999999999999999976433 25677888888876553 44567788888
Q ss_pred HHHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 156 PKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 156 ~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
..||.|++.||++|++..||+||+|+|||||++|++.++|+.+|+++||||..
T Consensus 164 -~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~ 216 (325)
T 1j0a_A 164 -TLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAV 216 (325)
T ss_dssp -HTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred -HHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEe
Confidence 56889999999999976899999999999999999999999999999999964
No 28
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=100.00 E-value=1.7e-45 Score=323.28 Aligned_cols=193 Identities=17% Similarity=0.267 Sum_probs=174.0
Q ss_pred ccccCCceeeccccc----CCC----CceEEEEeCCCCC-CCchhhHHHHHHHHH-----HHHcCCCCCCC---------
Q 028372 13 ELIGNTPMVYLNNVV----DGC----VARIAAKLETMEP-CSSVKDRIAYSMIKD-----AEDKGLITPGK--------- 69 (210)
Q Consensus 13 ~~~~~TPl~~~~~l~----~~~----~~~i~~K~E~~~p-tGS~K~R~a~~~~~~-----a~~~g~~~~~~--------- 69 (210)
.++++|||+++++++ +.+ +.+||+|+|++|| |||||+|++.+++.. ++++|.+++|.
T Consensus 74 ~g~~~TPL~~~~~l~~~l~~~~g~~~~~~v~lK~E~~~p~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~~ 153 (442)
T 3ss7_X 74 GGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPE 153 (442)
T ss_dssp TTCCCCCEEECHHHHHHHHHHHTCCCCSEEEEEEGGGCTTTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSHH
T ss_pred CCCCCCCcEEhHhhhhHHHHhhCCCcCCeEEEeecCCCCCCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhhh
Confidence 456799999999876 444 4799999999999 999999999999986 78899888775
Q ss_pred -------eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCC
Q 028372 70 -------TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTP 142 (210)
Q Consensus 70 -------~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~ 142 (210)
.+|+++|+||||+|+|++|+++|++|+||||++++..|++.++.+||+|+.++. +++++.+.+++++++.+
T Consensus 154 ~r~~~~~~~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~--~~~~a~~~a~~~a~~~~ 231 (442)
T 3ss7_X 154 FKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQ--DYGVAVEEGRKAAQSDP 231 (442)
T ss_dssp HHHHHHTSEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESS--CHHHHHHHHHHHHHTCT
T ss_pred hhhhccCcEEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhCC
Confidence 489999999999999999999999999999999999999999999999999996 58999999999998887
Q ss_pred CeEEcCCCCCChhHHHHHHhHHHHHHHhhCC--------CCCEEEEccCchhHHHHHHHHHHhc-CCCCEEEEEE
Q 028372 143 DGYLLRQFENPANPKIHYETTGPEIWQDSGG--------KVDAFISGIGTGGTVTGAGRFLKEN-NPDIKVVLRV 208 (210)
Q Consensus 143 ~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~--------~~d~vv~pvG~Gg~~~Gi~~~~k~~-~~~~~vigv~ 208 (210)
++||+++ .|+.+++.||.|++.||++|+++ .||+||+|+|+||+++|++.++|+. +|+++||||.
T Consensus 232 ~~~~i~~-~n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~VvvpvG~GG~~aGi~~~lk~~~~~~v~vigVe 305 (442)
T 3ss7_X 232 NCFFIDD-ENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAE 305 (442)
T ss_dssp TEEECCT-TTCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEEECSSSHHHHHHHHHHHHHHGGGEEEEEEE
T ss_pred CceeCCC-CChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEEEeCCchHHHHHHHHHHHhcCCCCEEEEEE
Confidence 7899998 56666689999999999999842 3669999999999999999999997 8999999985
No 29
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=100.00 E-value=3.5e-46 Score=318.04 Aligned_cols=198 Identities=16% Similarity=0.138 Sum_probs=176.2
Q ss_pred hhhHhhhccccCCceeecccccCCC-C-ceEEEEeCCCC-C--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEe--eCCC
Q 028372 6 AIKRDVTELIGNTPMVYLNNVVDGC-V-ARIAAKLETME-P--CSSVKDRIAYSMIKDAEDKGLITPGKTTLIE--VTSG 78 (210)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~~~-~-~~i~~K~E~~~-p--tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~--~ssG 78 (210)
..++++...+++|||++++++++.+ | .+||+|+|++| | +||||+|++.+++.++.++|. ++||+ +|+|
T Consensus 4 ~~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~~~g~-----~~vv~~G~ssG 78 (341)
T 1f2d_A 4 AKFAKYPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDY-----THLVSIGGRQS 78 (341)
T ss_dssp TSSCCCCCSSSSCCEEECHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCC-----SEEEEEEETTC
T ss_pred ccCCCcccCCCCCcceeHHhHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcch
Confidence 3456788999999999999998777 7 89999999999 9 999999999999999998885 67999 9999
Q ss_pred chHHHHHHHHHHcCCcEEEEEcCCCC-----HH------HHHHHHHcCCEEEEECCCCCH---HHHHHHHHHHHHhCCCe
Q 028372 79 NTGVGLAFIAAARGYNLIIVMPSTCS-----ME------RRIVLRALGAEIILADSALRF---EEILEKGEEILKKTPDG 144 (210)
Q Consensus 79 N~g~alA~~a~~~g~~~~vvvp~~~~-----~~------~~~~~~~~Ga~v~~v~~~~~~---~~~~~~a~~~~~~~~~~ 144 (210)
|||+|+|++|+.+|++|++|||++.+ +. |++.++.+||+|+.++..... +++.+.+++++++.+..
T Consensus 79 N~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~ 158 (341)
T 1f2d_A 79 NQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKP 158 (341)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhCCCEEEEeCCccchhHHHHHHHHHHHHHhcCCcE
Confidence 99999999999999999999999887 44 999999999999999975432 36777888888877544
Q ss_pred E-EcCC-CCCChhHHHHHHhHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 145 Y-LLRQ-FENPANPKIHYETTGPEIWQDSG---GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 145 ~-~~~~-~~n~~~~~~g~~t~~~Ei~~q~~---~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
+ +.+| |+||.+ ..||.|++.||++|++ ..||+||+|+|||||++|++.+||+.+|+++||||..
T Consensus 159 ~~i~~~~~~np~~-~~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~ 227 (341)
T 1f2d_A 159 YPIPAGCSEHKYG-GLGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDA 227 (341)
T ss_dssp EEECGGGTTSTTT-TTHHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEEC
T ss_pred EEeCCCcCCCCcc-HHHHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEEEe
Confidence 4 5578 999999 5689999999999995 4799999999999999999999999999999999964
No 30
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=100.00 E-value=2.1e-45 Score=313.36 Aligned_cols=199 Identities=20% Similarity=0.203 Sum_probs=174.0
Q ss_pred hhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeC--CCch
Q 028372 5 NAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEP--CSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVT--SGNT 80 (210)
Q Consensus 5 ~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~p--tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~s--sGN~ 80 (210)
+.+++++...+++|||+++++|++.+|.+||+|+|++|| +||||+|++.+++.+++++|. ++||++| +|||
T Consensus 20 ~~a~~ri~~~~~~TPL~~~~~l~~~~g~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~-----~~vv~~s~tsGN~ 94 (342)
T 4d9b_A 20 LTRFPRLEFIGAPTPLEYLPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGA-----DTLITAGAIQSNH 94 (342)
T ss_dssp GGGSCCCCSSCSCCCEEECHHHHHHHTSCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTC-----CEEEEEEETTCHH
T ss_pred hccCCcccccCCCCceeEhhhhHHhhCCEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCC-----CEEEEcCCcccHH
Confidence 567888999999999999999987778899999999999 999999999999999999886 6788886 7999
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCCH--------HHHHHHHHcCCEEEEECCCCCHHHHH-HHHHHHHHhCCCeEEc-CCC
Q 028372 81 GVGLAFIAAARGYNLIIVMPSTCSM--------ERRIVLRALGAEIILADSALRFEEIL-EKGEEILKKTPDGYLL-RQF 150 (210)
Q Consensus 81 g~alA~~a~~~g~~~~vvvp~~~~~--------~~~~~~~~~Ga~v~~v~~~~~~~~~~-~~a~~~~~~~~~~~~~-~~~ 150 (210)
|+|+|++|+.+|++|++|||++++. .|++.++.+||+|+.++...+.+++. +.++++.++.+..|++ .++
T Consensus 95 g~alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~ 174 (342)
T 4d9b_A 95 VRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQGFRPYVIPVGG 174 (342)
T ss_dssp HHHHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEECSCCSSHHHHHHHHHHHHHHTTCCEEECCGGG
T ss_pred HHHHHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHHHCCCEEEEECchhhHHHHHHHHHHHHHhcCCceEEeCCCC
Confidence 9999999999999999999998773 58999999999999999865566665 4567777666444433 345
Q ss_pred CCChhHHHHHHhHHHHHHHhhC--CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 151 ENPANPKIHYETTGPEIWQDSG--GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 151 ~n~~~~~~g~~t~~~Ei~~q~~--~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
.|+.+ ..||.|++.||++|++ ..||+||+|+|||||++|++.++|+.+|+++||||..
T Consensus 175 ~n~~~-~~G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~ 234 (342)
T 4d9b_A 175 SSALG-AMGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTV 234 (342)
T ss_dssp CSHHH-HHHHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEES
T ss_pred CChHH-HHHHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEe
Confidence 67776 6799999999999996 4799999999999999999999999999999999964
No 31
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=100.00 E-value=1.4e-44 Score=312.48 Aligned_cols=188 Identities=28% Similarity=0.344 Sum_probs=170.5
Q ss_pred cCCceeecccccCCCCceEEEEeCCCCC-CCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCc
Q 028372 16 GNTPMVYLNNVVDGCVARIAAKLETMEP-CSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYN 94 (210)
Q Consensus 16 ~~TPl~~~~~l~~~~~~~i~~K~E~~~p-tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~ 94 (210)
.+|||++++++++. |.+||+|+|++|| |||||+|++.+++..+. +.++++ ++|+++|+||||+|+|++|+.+|++
T Consensus 95 ~~TPL~~l~~Ls~~-g~~IylK~E~lnp~tGS~K~R~a~~~i~~l~--~a~~~g-~~Iv~assGNhG~AlA~aaa~~Gl~ 170 (389)
T 1wkv_A 95 KPTPLVRSRLQLPN-GVRVWLKLEWYNPFSLSVKDRPAVEIISRLS--RRVEKG-SLVADATSSNFGVALSAVARLYGYR 170 (389)
T ss_dssp CSCCEEECCCCCST-TEEEEEEEGGGSTTTSBTTHHHHHHHHHHHT--TTSCTT-CEEEEECCHHHHHHHHHHHHHTTCE
T ss_pred CCCCeEEccccccC-CCeEEEEEcCCCCCcCChHHHHHHHHHHHHH--HHHhcC-CEEEEECCcHHHHHHHHHHHHcCCe
Confidence 57999999999876 8899999999999 99999999999999854 434455 6899999999999999999999999
Q ss_pred EEEEEcCCCCHHHHHHHHHcCCEEE-EECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHhhC-
Q 028372 95 LIIVMPSTCSMERRIVLRALGAEII-LADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSG- 172 (210)
Q Consensus 95 ~~vvvp~~~~~~~~~~~~~~Ga~v~-~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~- 172 (210)
|++|||+.++..++.+|+.+||+|+ .++. .+++++.+.+++++++. +++|++||+||.+++.||.|++.||++|+.
T Consensus 171 ~~ivmp~~~~~~k~~~~~~~GAeVv~~v~~-~~~~da~~~a~~~~~~~-g~~~~~p~~N~~~~~~~~~t~g~Ei~~Q~~~ 248 (389)
T 1wkv_A 171 ARVYLPGAAEEFGKLLPRLLGAQVIVDPEA-PSTVHLLPRVMKDSKNE-GFVHVNQFYNDANFEAHMRGTAREIFVQSRR 248 (389)
T ss_dssp EEEEEETTSCHHHHHHHHHTTCEEEEETTC-SSSGGGHHHHHHHHHHH-CCEECCTTTCHHHHHHHHHTHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHcCCEEEEEcCC-CCHHHHHHHHHHHHHcc-CcEecCcCCChHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999 7773 35788888888887775 789999999999989999999999999994
Q ss_pred --CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 173 --GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 173 --~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
..||+||+|+||||+++|++.+||+.+|+++||||..
T Consensus 249 ~g~~~D~vv~~vG~GG~~~Gi~~~~k~~~p~vrvigVe~ 287 (389)
T 1wkv_A 249 GGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQP 287 (389)
T ss_dssp TTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred cCCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEEEEec
Confidence 3699999999999999999999999999999999964
No 32
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=100.00 E-value=2.1e-44 Score=312.92 Aligned_cols=194 Identities=20% Similarity=0.232 Sum_probs=170.4
Q ss_pred ccccCCceeecccccCCCC-ceEEEEeCCCC-CCCchhhHHHHHHHHHHH--HcCC----CC-------CCCe-EEEeeC
Q 028372 13 ELIGNTPMVYLNNVVDGCV-ARIAAKLETME-PCSSVKDRIAYSMIKDAE--DKGL----IT-------PGKT-TLIEVT 76 (210)
Q Consensus 13 ~~~~~TPl~~~~~l~~~~~-~~i~~K~E~~~-ptGS~K~R~a~~~~~~a~--~~g~----~~-------~~~~-~vv~~s 76 (210)
..+++|||+++++|++.+| .+||+|+|++| |+||||+|++.+++.++. +.|. +. .+.+ +|+++|
T Consensus 40 ~~~~~TPL~~~~~l~~~~g~~~i~~K~E~~~~ptgSfK~Rga~~~i~~~~~~~~G~~~~~l~~e~l~~~~~~~~~vv~aS 119 (398)
T 4d9i_A 40 AGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFXMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTT 119 (398)
T ss_dssp TTCCCCCEEECHHHHHHHTSSEEEEEEGGGSTTTTBSTHHHHHHHHHHHHHHHHTCCGGGCCHHHHHHCCSCCCEEEEEC
T ss_pred CCCCCCCceehHHHHHHhCCCcEEEEECCCCCCCCcchhhhhHHHHHHHHHHhhcccccccchhhhhhhccCCCEEEEEC
Confidence 4578999999999988888 59999999999 999999999999999884 3331 00 1135 899999
Q ss_pred CCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC-----CC
Q 028372 77 SGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ-----FE 151 (210)
Q Consensus 77 sGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~ 151 (210)
+||||+|+|++|+.+|++|++|||++++..|++.++.+||+|+.+++ +++++.+.+++++++. +++|++| |+
T Consensus 120 sGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~--~~~~a~~~a~~~~~~~-g~~~v~~~~~~g~~ 196 (398)
T 4d9i_A 120 DGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDM--NYDDTVRLTMQHAQQH-GWEVVQDTAWEGYT 196 (398)
T ss_dssp SSHHHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHTTTCEEEECSS--CHHHHHHHHHHHHHHH-TCEECCSSCBTTBC
T ss_pred CCHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHHc-CCEEecCcccCCcC
Confidence 99999999999999999999999999999999999999999999996 5899999999998887 7899986 65
Q ss_pred -CChhHHHHHHhHHHHHHHhhCCC---CCEEEEccCchhHHHHHHHHHHhc--CCCCEEEEEEe
Q 028372 152 -NPANPKIHYETTGPEIWQDSGGK---VDAFISGIGTGGTVTGAGRFLKEN--NPDIKVVLRVL 209 (210)
Q Consensus 152 -n~~~~~~g~~t~~~Ei~~q~~~~---~d~vv~pvG~Gg~~~Gi~~~~k~~--~~~~~vigv~~ 209 (210)
|+.+.+.||.|++.||++|+++. ||+||+|+|+||+++|++.++|+. .|+++||+|..
T Consensus 197 ~~~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigVep 260 (398)
T 4d9i_A 197 KIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEP 260 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEEEE
T ss_pred CCCchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEEEe
Confidence 45666889999999999999644 999999999999999999999876 57899999853
No 33
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=100.00 E-value=3.5e-44 Score=305.23 Aligned_cols=198 Identities=19% Similarity=0.155 Sum_probs=170.8
Q ss_pred hhhhHhhhccccCCceeecccccCCC-C-ceEEEEeCCCC-C--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEe--eCC
Q 028372 5 NAIKRDVTELIGNTPMVYLNNVVDGC-V-ARIAAKLETME-P--CSSVKDRIAYSMIKDAEDKGLITPGKTTLIE--VTS 77 (210)
Q Consensus 5 ~~~~~~i~~~~~~TPl~~~~~l~~~~-~-~~i~~K~E~~~-p--tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~--~ss 77 (210)
+..++++...+++|||++++++++.. | .+||+|+|++| | +||||+|++.+++.++.++|. ++||+ +|+
T Consensus 3 ~~~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~gs~K~R~a~~~l~~a~~~g~-----~~vv~~Gass 77 (338)
T 1tzj_A 3 LQRFPRYPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGC-----DTLVSIGGIQ 77 (338)
T ss_dssp GGGSCCCCCSSSSCCEEECHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHTTHHHHHHTTC-----CEEEEEEETT
T ss_pred cccCCccccCCCCCccEEHHHHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCch
Confidence 34567899999999999999888777 7 89999999996 8 999999999999999998875 57888 799
Q ss_pred CchHHHHHHHHHHcCCcEEEEEcCCCCHH--------HHHHHHHcCCEEEEECCCCCHH---HHHHHHHHHHHhCCCeEE
Q 028372 78 GNTGVGLAFIAAARGYNLIIVMPSTCSME--------RRIVLRALGAEIILADSALRFE---EILEKGEEILKKTPDGYL 146 (210)
Q Consensus 78 GN~g~alA~~a~~~g~~~~vvvp~~~~~~--------~~~~~~~~Ga~v~~v~~~~~~~---~~~~~a~~~~~~~~~~~~ 146 (210)
||||+|+|++|+.+|++|++|+|++.+.. |++.++.+||+|+.++.+.+.. .+.+.+++++++.+..|+
T Consensus 78 GN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~ 157 (338)
T 1tzj_A 78 SNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDGFDIGFRRSWEDALESVRAAGGKPYA 157 (338)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC-------CHHHHHHHHHHHTTCCEEE
T ss_pred hHHHHHHHHHHHHhCCceEEEecCCCCccccccccCccHHHHHhCCCEEEEeCCcchhhHHHHHHHHHHHHHhcCCceEE
Confidence 99999999999999999999999988765 9999999999999998753211 246778888877655554
Q ss_pred c-CC-CCCChhHHHHHHhHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhc-CCCCEEEEEEe
Q 028372 147 L-RQ-FENPANPKIHYETTGPEIWQDSG---GKVDAFISGIGTGGTVTGAGRFLKEN-NPDIKVVLRVL 209 (210)
Q Consensus 147 ~-~~-~~n~~~~~~g~~t~~~Ei~~q~~---~~~d~vv~pvG~Gg~~~Gi~~~~k~~-~~~~~vigv~~ 209 (210)
+ ++ |+||.+ ..||.|++.||++|++ ..||+||+|+|||||++|++.++|+. +|+ +||+|..
T Consensus 158 ~p~~~~~n~~~-~~g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~ 224 (338)
T 1tzj_A 158 IPAGCSDHPLG-GLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGVDA 224 (338)
T ss_dssp CCGGGTSSTTT-TTHHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEEEC
T ss_pred eCCCcCCCccc-HHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEEEc
Confidence 4 56 899998 5789999999999995 47999999999999999999999998 899 9999964
No 34
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=5e-42 Score=299.57 Aligned_cols=193 Identities=17% Similarity=0.162 Sum_probs=160.4
Q ss_pred ccc-cCCceeecccccCCC-CceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHH
Q 028372 13 ELI-GNTPMVYLNNVVDGC-VARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAA 90 (210)
Q Consensus 13 ~~~-~~TPl~~~~~l~~~~-~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~ 90 (210)
+.+ .+|||+++++|++.+ +.+||+|+|++|||||||+|++.+++..+.++|+ ...|+++|+||||+|+|++|+.
T Consensus 72 ~~ig~~TPL~~~~~Ls~~~gg~~i~lK~E~l~ptGSfK~R~a~~~i~~a~~~g~----~~vI~~~ssGNhg~avA~aaa~ 147 (418)
T 1x1q_A 72 QFAGRPTPLYHAKRLSEYWGGAQVFLKREDLLHTGAHKINNTLGQALLARRMGK----RRVIAETGAGQHGVSVATVAAL 147 (418)
T ss_dssp HTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSGGGBTTHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHHHH
T ss_pred cccCCCCCcEEhHHhHhhcCCceEEEEEccCCcCccHHHHHHHHHHHHHHHcCC----CEEEEecCchHHHHHHHHHHHH
Confidence 566 469999999998777 5899999999999999999999999998888775 2445569999999999999999
Q ss_pred cCCcEEEEEcCCC---CHHHHHHHHHcCCEEEEECC-CCCHHHHHHHHHH-HHHhCCCeEEc-CCCCCCh----hHHHHH
Q 028372 91 RGYNLIIVMPSTC---SMERRIVLRALGAEIILADS-ALRFEEILEKGEE-ILKKTPDGYLL-RQFENPA----NPKIHY 160 (210)
Q Consensus 91 ~g~~~~vvvp~~~---~~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~~-~~~~n~~----~~~~g~ 160 (210)
+|++|+||||+.. +..|+++|+.+||+|+.++. ..+++++.+.+.+ ++++.++.+|+ +++.|+. ++..||
T Consensus 148 ~Gi~~~I~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~~~~a~~~a~~~~~~~~~~~~~i~~~~~n~~p~~~~v~~gq 227 (418)
T 1x1q_A 148 FGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQ 227 (418)
T ss_dssp HTCEEEEEEEHHHHHTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHH
T ss_pred cCCCEEEEECCCcchhhhHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEeCCccCCCCcHHHHHHHH
Confidence 9999999999853 23678899999999999984 4468888887754 46655455554 5554443 222599
Q ss_pred HhHHHHHHHhhC----CCCCEEEEccCchhHHHHHHHHHHhc-CCCCEEEEEEe
Q 028372 161 ETTGPEIWQDSG----GKVDAFISGIGTGGTVTGAGRFLKEN-NPDIKVVLRVL 209 (210)
Q Consensus 161 ~t~~~Ei~~q~~----~~~d~vv~pvG~Gg~~~Gi~~~~k~~-~~~~~vigv~~ 209 (210)
+|++.||++|+. ..||+||+|+|+||+++|++.++|++ .|+++||||..
T Consensus 228 ~t~~~Ei~~Ql~~~~~~~~D~vvvpvGgGG~~~Gi~~~~k~l~~p~~~vigVe~ 281 (418)
T 1x1q_A 228 SVIGEEVKRQSLELFGRLPDALIAAVGGGSNAIGLFAPFAYLPEGRPKLIGVEA 281 (418)
T ss_dssp THHHHHHHHHHHHHHSSCCSEEEEECSSSSHHHHHHHHHHTSCTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHhhcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCCeEEEEec
Confidence 999999999983 35999999999999999999999987 89999999964
No 35
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=100.00 E-value=1.9e-41 Score=293.26 Aligned_cols=195 Identities=21% Similarity=0.213 Sum_probs=161.9
Q ss_pred HhhhccccC-CceeecccccCCCC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEE-eeCCCchHHHHH
Q 028372 9 RDVTELIGN-TPMVYLNNVVDGCV-ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLI-EVTSGNTGVGLA 85 (210)
Q Consensus 9 ~~i~~~~~~-TPl~~~~~l~~~~~-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv-~~ssGN~g~alA 85 (210)
+.+.+.+++ |||+++++|++.+| .+||+|+|++|||||||+|++.+++..+.++|. ..+| ++|+||||+|+|
T Consensus 41 ~~~~~~ig~~TPL~~~~~l~~~~g~~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~-----~~vv~~~ssGN~g~a~A 115 (388)
T 1v8z_A 41 YYLKTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGK-----TRLIAETGAGQHGVATA 115 (388)
T ss_dssp HHHHHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEEEESSSHHHHHHH
T ss_pred HHHHHhcCCCCCceehHhhHhhcCCceEEEEeccCCCCCCHHHHHHHHHHHHHHHcCC-----CEEEEecCchHHHHHHH
Confidence 334557865 99999999987775 899999999999999999999999999888775 3455 589999999999
Q ss_pred HHHHHcCCcEEEEEcCC-CC--HHHHHHHHHcCCEEEEECC-CCCHHHHHHHHHH-HHHhCCCeEE-cCCCCCChh----
Q 028372 86 FIAAARGYNLIIVMPST-CS--MERRIVLRALGAEIILADS-ALRFEEILEKGEE-ILKKTPDGYL-LRQFENPAN---- 155 (210)
Q Consensus 86 ~~a~~~g~~~~vvvp~~-~~--~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~n~~~---- 155 (210)
++|+.+|++|++|||+. .+ ..|+++++.+||+|+.++. ..+++++.+.+.+ ++++.++.+| ++++.|+.+
T Consensus 116 ~aa~~~G~~~~iv~p~~~~~~~~~~~~~~~~~GA~V~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~ 195 (388)
T 1v8z_A 116 MAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTI 195 (388)
T ss_dssp HHHHHTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHH
T ss_pred HHHHHcCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCceEecCCccCCCCchhH
Confidence 99999999999999974 22 4668999999999999985 4468888887754 5666545444 567666542
Q ss_pred HHHHHHhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 156 PKIHYETTGPEIWQDS----GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 156 ~~~g~~t~~~Ei~~q~----~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
+..||.|++.||++|+ +..||+||+|+||||+++|++.+++ .+|+++||||..
T Consensus 196 ~~~~~~t~~~Ei~~q~~~~~~~~~d~vvvpvG~GG~~aGi~~~~~-~~~~~~vigve~ 252 (388)
T 1v8z_A 196 VRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFV-NDKKVKLVGVEA 252 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT-TCTTSEEEEEEE
T ss_pred HHHHhHHHHHHHHHHHHHhcCCCCCEEEEecCccHhHHHHHHHHh-hCCCceEEEEcc
Confidence 2348999999999999 4459999999999999999999888 489999999863
No 36
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=100.00 E-value=8.1e-42 Score=296.47 Aligned_cols=194 Identities=18% Similarity=0.179 Sum_probs=162.0
Q ss_pred hhhcccc-CCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEe-eCCCchHHHHHHH
Q 028372 10 DVTELIG-NTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIE-VTSGNTGVGLAFI 87 (210)
Q Consensus 10 ~i~~~~~-~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~-~ssGN~g~alA~~ 87 (210)
.+.+.++ +|||+++++|++.+|.+||+|+|++|||||||+|++.+++..+.++|. .++++ +|+||||+|+|++
T Consensus 47 ~~~~~ig~~TPL~~~~~l~~~~g~~i~lK~E~l~ptGSfK~R~a~~~~~~a~~~g~-----~~vi~e~ssGNhg~a~A~a 121 (396)
T 1qop_B 47 LLKNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGK-----SEIIAETGAGQHGVASALA 121 (396)
T ss_dssp HHHHTTCCSCCEEECHHHHTTSSEEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEEEESSSHHHHHHHHH
T ss_pred HHHHhCCCCCCcEEhhhhhhccCCeEEEEeccCCCCCcHHHHHHHHHHHHHHHcCc-----CEEEEecCchHHHHHHHHH
Confidence 3446776 499999999998888999999999999999999999999999988875 44565 8999999999999
Q ss_pred HHHcCCcEEEEEcCC-CCH--HHHHHHHHcCCEEEEECC-CCCHHHHHHHHHHH-HHhCCCeEEc-CCCCCCh----hHH
Q 028372 88 AAARGYNLIIVMPST-CSM--ERRIVLRALGAEIILADS-ALRFEEILEKGEEI-LKKTPDGYLL-RQFENPA----NPK 157 (210)
Q Consensus 88 a~~~g~~~~vvvp~~-~~~--~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a~~~-~~~~~~~~~~-~~~~n~~----~~~ 157 (210)
|+.+|++|++|||+. .+. .|+++|+.+||+|+.++. +.+++++.+.+.+. +++.++.+|+ +++.|+. ++.
T Consensus 122 a~~~G~~~~i~mp~~~~~~~~~~~~~~~~~GA~V~~v~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~v~ 201 (396)
T 1qop_B 122 SALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVR 201 (396)
T ss_dssp HHHHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHH
T ss_pred HHHCCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhccCCcEEEeCCcCCCCCchHHHH
Confidence 999999999999985 433 557899999999999984 44688888888764 6655465554 5554442 223
Q ss_pred HHHHhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 158 IHYETTGPEIWQDS----GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 158 ~g~~t~~~Ei~~q~----~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
.||+|++.||++|+ +..||+||+|+|+||+++|++.+++ ..|+++||||..
T Consensus 202 ~g~~t~~~Ei~~Ql~~~~~~~~d~vvvpvG~GG~~~Gi~~~~~-~~~~~~vigVe~ 256 (396)
T 1qop_B 202 EFQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFI-NDTSVGLIGVEP 256 (396)
T ss_dssp HTTTHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT-TCTTSEEEEEEE
T ss_pred HHHhHHHHHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHHh-cCCCCEEEEEeC
Confidence 48999999999999 5579999999999999999999998 589999999963
No 37
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=100.00 E-value=5.7e-41 Score=297.48 Aligned_cols=191 Identities=19% Similarity=0.142 Sum_probs=168.9
Q ss_pred hhccccCCceeecccccCC-CC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHH---cCCCCCCCeEEEeeCCCchHHHHH
Q 028372 11 VTELIGNTPMVYLNNVVDG-CV-ARIAAKLETMEPCSSVKDRIAYSMIKDAED---KGLITPGKTTLIEVTSGNTGVGLA 85 (210)
Q Consensus 11 i~~~~~~TPl~~~~~l~~~-~~-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~---~g~~~~~~~~vv~~ssGN~g~alA 85 (210)
+...+++|||+++++++.. +| .+||+|+|++|||||||||++.+++..+.+ ++. +..+|+++|+||||.|+|
T Consensus 124 v~l~~g~TPLv~l~~L~~~~lg~~~l~~K~E~~nPTGSFKDRga~~~~~~l~~~~~~~~---g~~~Vv~aSsGNtG~AlA 200 (486)
T 1e5x_A 124 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKR---PVVGVGCASTGDTSAALS 200 (486)
T ss_dssp CCCCCCCCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHHHHHTTC---CCCEEEECCCSHHHHHHH
T ss_pred ccccCCCCCcEECcccchhhcCCCcEEEeeccCCCccCHHHHHHHHHHHHHHHHHHcCC---CCeEEEEcCCCHHHHHHH
Confidence 3445788999999988876 66 489999999999999999999988876654 331 237899999999999999
Q ss_pred HHHHHcCCcEEEEEcCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHH
Q 028372 86 FIAAARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTG 164 (210)
Q Consensus 86 ~~a~~~g~~~~vvvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~ 164 (210)
++|+++|++|++|+|.+ ++..|+++|+.+||+|+.++++ ++++++.+++++++. ++++++++ |+.+ ..||.|++
T Consensus 201 ~~a~~~Gi~~~I~~P~~~~s~~k~~~~~~~GA~vi~v~g~--~dd~~~~a~~l~~~~-~~~~vns~-N~~~-i~gq~t~~ 275 (486)
T 1e5x_A 201 AYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTD--FDGCMKLIREITAEL-PIYLANSL-NSLR-LEGQKTAA 275 (486)
T ss_dssp HHHHHHTCCEEEEEEGGGCCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHS-CEEEGGGS-HHHH-HHHHTHHH
T ss_pred HHHHHcCCeEEEEECCCCCCHHHHHHHHhCCCEEEEECCC--HHHHHHHHHHHHhcC-CEEEeCCC-CHHH-HHHHHHHH
Confidence 99999999999999996 9999999999999999999964 899999999998887 68899887 8888 67899999
Q ss_pred HHHHHhhCC-CCCEEEEccCchhHHHHHHHHHHhcC------CCCEEEEEEe
Q 028372 165 PEIWQDSGG-KVDAFISGIGTGGTVTGAGRFLKENN------PDIKVVLRVL 209 (210)
Q Consensus 165 ~Ei~~q~~~-~~d~vv~pvG~Gg~~~Gi~~~~k~~~------~~~~vigv~~ 209 (210)
+||++|+++ .||+||+|+|+||+++|++.+||+.+ |..++|+|..
T Consensus 276 ~Ei~~ql~~~~~D~vvvpvG~GG~i~Gi~~a~k~~~~~Gli~p~~rvi~Ve~ 327 (486)
T 1e5x_A 276 IEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKXCQELGLVDRIPRMVCAQA 327 (486)
T ss_dssp HHHHHHTTSCCCSEEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEE
T ss_pred HHHHHHcCCCCCCEEEEeCCcHHHHHHHHHHHHHhhhhccCCCCCEEEEEec
Confidence 999999964 59999999999999999999998764 8899999864
No 38
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=100.00 E-value=3.2e-40 Score=288.34 Aligned_cols=193 Identities=19% Similarity=0.223 Sum_probs=159.1
Q ss_pred hcccc-CCceeecccccCCCC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028372 12 TELIG-NTPMVYLNNVVDGCV-ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAA 89 (210)
Q Consensus 12 ~~~~~-~TPl~~~~~l~~~~~-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~ 89 (210)
.+.++ +|||+++++|++.+| .+||+|+|++|||||||+|++.+++..+++.|+ ...|+++|+||||+|+|++|+
T Consensus 75 ~~~~g~~TPL~~~~~Ls~~~gg~~i~lK~E~lnptGSfK~R~a~~~~~~a~~~g~----~~vI~~~ssGNhG~A~A~aaa 150 (422)
T 2o2e_A 75 ANYAGRPSPLYEATRLSQHAGSARIFLKREDLNHTGSHKINNVLGQALLARRMGK----TRVIAETGAGQHGVATATACA 150 (422)
T ss_dssp TTTSSCSCCEEECGGGGGGTTTCEEEEECGGGCCSSTTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHHH
T ss_pred HHhCCCCCCeEEChhhHhhcCCCeEEEEEcCCCCCCcHHHHHHHHHHHHHHHcCC----CeEEEecCccHHHHHHHHHHH
Confidence 45664 599999999998884 899999999999999999999999999888775 245667999999999999999
Q ss_pred HcCCcEEEEEcCCCC---HHHHHHHHHcCCEEEEECC-CCCHHHHHHHHHH-HHHhCCCeEEc-CCCCCC--h--hHHHH
Q 028372 90 ARGYNLIIVMPSTCS---MERRIVLRALGAEIILADS-ALRFEEILEKGEE-ILKKTPDGYLL-RQFENP--A--NPKIH 159 (210)
Q Consensus 90 ~~g~~~~vvvp~~~~---~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~~-~~~~n~--~--~~~~g 159 (210)
++|++|+||||.... ..|+.+|+.+||+|+.++. +.+++++.+.+.+ ++++.++.+|+ +++.|+ . ++..|
T Consensus 151 ~~G~~~~I~mp~~~~~~q~~kv~~~~~~GA~Vv~v~~~~~~~~da~~~a~~~~~~~~~~~~yi~~s~~g~~p~~~~v~~~ 230 (422)
T 2o2e_A 151 LLGLDCVIYMGGIDTARQALNVARMRLLGAEVVAVQTGSKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFPTMVRDF 230 (422)
T ss_dssp HHTCEEEEEEEHHHHHHSHHHHHHHHHTTCEEEEECSTTSCHHHHHHHHHHHHHHHTTTEEECCCCSSSCCCCHHHHHHH
T ss_pred HcCCcEEEEeCCCcchhhHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhcCCCcEEEeCCccCCCCcHHHHHHH
Confidence 999999999998532 4677899999999999985 4578888887755 56665465654 444332 2 33458
Q ss_pred HHhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 160 YETTGPEIWQDS----GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 160 ~~t~~~Ei~~q~----~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
|.|++.||.+|+ +..||+||+|+|+||+++|++.+++. .|+++||||..
T Consensus 231 q~t~g~Ei~~Ql~~~~~~~pD~vvvpvG~GG~~~Gi~~~~~~-~p~v~vigVe~ 283 (422)
T 2o2e_A 231 QRIIGMEARVQIQGQAGRLPDAVVACVGGGSNAIGIFHAFLD-DPGVRLVGFEA 283 (422)
T ss_dssp TTHHHHHHHHHHHHHSSSCCSEEEEEGGGHHHHHTTSGGGTT-CTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEccCCchhHHHHHHHHhc-CCCCeEEEEec
Confidence 999999999998 34599999999999999999888754 89999999964
No 39
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=100.00 E-value=1.4e-35 Score=259.50 Aligned_cols=176 Identities=16% Similarity=0.118 Sum_probs=149.2
Q ss_pred cCCceeecccccCCCCceEEEEeCCC-CCCCchhhHHHHHHH---HHHHHcCCCCCCCeEEEeeCCCchHHHHHH-HHHH
Q 028372 16 GNTPMVYLNNVVDGCVARIAAKLETM-EPCSSVKDRIAYSMI---KDAEDKGLITPGKTTLIEVTSGNTGVGLAF-IAAA 90 (210)
Q Consensus 16 ~~TPl~~~~~l~~~~~~~i~~K~E~~-~ptGS~K~R~a~~~~---~~a~~~g~~~~~~~~vv~~ssGN~g~alA~-~a~~ 90 (210)
++|||+++++ +||+ +|++ |||||||||++.+++ ..+ +++ +..+|+++|+||||.|+|+ +|+.
T Consensus 82 ~~TPL~~l~~-------~i~~-~E~~~~pTgSfKdr~a~~l~~~l~~a-~~~----~~~~Iv~atsGNtG~A~A~~~a~~ 148 (428)
T 1vb3_A 82 FPAPVANVES-------DVGC-LELFHGPTLAFKDFGGRFMAQMLTHI-AGD----KPVTILTATSGDTGAAVAHAFYGL 148 (428)
T ss_dssp SCCCEEEEET-------TEEE-EECCCSTTSBTHHHHHHHHHHHHHHH-TTT----CCEEEEEECSSSHHHHHHHHTTTC
T ss_pred CCCCeEEecC-------CeEE-eeccCCCcccHHHHHHHHHHHHHHHH-Hhc----CCCEEEecCCchHHHHHHHHHhhh
Confidence 7899999874 6999 7777 699999999999885 444 233 2478999999999999994 9999
Q ss_pred cCCcEEEEEcC-CCCHHHHHHHHHcCCEE--EEECCCCCHHHHHHHHHHHHHh-----CCCeEEcCCCCCChhHHHHHHh
Q 028372 91 RGYNLIIVMPS-TCSMERRIVLRALGAEI--ILADSALRFEEILEKGEEILKK-----TPDGYLLRQFENPANPKIHYET 162 (210)
Q Consensus 91 ~g~~~~vvvp~-~~~~~~~~~~~~~Ga~v--~~v~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~n~~~~~~g~~t 162 (210)
+|++|+||+|+ ++++.++++|+.+||+| +.+++ +++++++.++++.++ ..+++++++ .|+.+ ..||.+
T Consensus 149 ~G~~~~I~~P~~~~s~~k~~~m~~~GA~V~~v~v~g--~~d~~~~~~~~~~~d~~~~~~~~~~~~n~-~n~~~-~~gq~t 224 (428)
T 1vb3_A 149 PNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDG--DFDACQALVKQAFDDEELKVALGLNSANS-INISR-LLAQIC 224 (428)
T ss_dssp TTEEEEEEEETTCSCHHHHHHHHSCCTTEEEEEEES--CHHHHHHHHHHGGGCHHHHHHHTEECCST-TSHHH-HHHTTH
T ss_pred cCCeEEEEECCCCCCHHHHHHHHhcCCeEEEEEeCC--CHHHHHHHHHHHHhchhhhhhcCeeeCCC-CCHHH-HHHHHH
Confidence 99999999999 59999999999999999 55554 589998888887653 125666666 46776 689999
Q ss_pred HHHHHHHhhCC---CCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372 163 TGPEIWQDSGG---KVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV 208 (210)
Q Consensus 163 ~~~Ei~~q~~~---~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~ 208 (210)
++.||++|+.+ .+|+||+|+|+||+++|++.+++...|..++|+|.
T Consensus 225 ~~~Ei~~ql~~~g~~~d~vvvpvG~GG~i~G~~~a~~~g~p~~kii~a~ 273 (428)
T 1vb3_A 225 YYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAAT 273 (428)
T ss_dssp HHHHHHTTSCTTTTTSEEEEEECSSCHHHHHHHHHHHTTCCCSEEEEEE
T ss_pred HHHHHHHHcccccCCCCEEEEeCCchHHHHHHHHHHHcCCCCCeEEeec
Confidence 99999999964 59999999999999999999999888988999975
No 40
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=100.00 E-value=3e-33 Score=245.97 Aligned_cols=176 Identities=14% Similarity=0.137 Sum_probs=147.1
Q ss_pred CCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHH---HHHHH-HcCCCCCCCeEEEeeCCCchHHH-HHHHHHHc
Q 028372 17 NTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSM---IKDAE-DKGLITPGKTTLIEVTSGNTGVG-LAFIAAAR 91 (210)
Q Consensus 17 ~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~---~~~a~-~~g~~~~~~~~vv~~ssGN~g~a-lA~~a~~~ 91 (210)
.|||+++.. ++|+|.|++|||||||||++.++ +..+. ++|. ..+|+++||||||.+ +|++|+++
T Consensus 93 ~~pl~~l~~-------~~~~kee~~~PTgSFKDRga~~~~~~l~~a~~~~g~----~~~Vv~ASSGNtG~aa~aa~a~~~ 161 (468)
T 4f4f_A 93 VCPLVQTDA-------NEFVLELFHGPTLAFKDVAMQLLARMMDYVLAQRGE----RATIVGATSGDTGGAAIEAFGGRD 161 (468)
T ss_dssp SSCEEEEET-------TEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHTTC----CEEEEEECSSHHHHHHHHHHTTCS
T ss_pred CCceEEecC-------CeehHHhccCCcccHHHHHHHHHHHHHHHHHHhcCC----CcEEEEECCchHHHHHHHHHHhcc
Confidence 399998742 69999999999999999999999 66664 5554 358999999999955 46668899
Q ss_pred CCcEEEEEcCC-CCHHHHHHHHHcC-CEE--EEECCCCCHHHHHHHHHHHHHhCC-----CeEEcCCCCCChhHHHHHHh
Q 028372 92 GYNLIIVMPST-CSMERRIVLRALG-AEI--ILADSALRFEEILEKGEEILKKTP-----DGYLLRQFENPANPKIHYET 162 (210)
Q Consensus 92 g~~~~vvvp~~-~~~~~~~~~~~~G-a~v--~~v~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~n~~~~~~g~~t 162 (210)
|++++|++|++ +++.|+++|+.+| ++| +.+++ +++++++.+++++++.+ +++++++ .|+.. +.||.|
T Consensus 162 Gi~~~I~~P~~~~s~~k~~~~~~~gganV~vv~v~g--~fdda~~~~k~~~~d~~~~~~~~~~~vns-in~~r-i~GQ~T 237 (468)
T 4f4f_A 162 NTDIFILFPNGRVSPVQQRQMTSSGFSNVHALSIEG--NFDDCQNLVKGMFNDLEFCDALSLSGVNS-INWAR-IMPQVV 237 (468)
T ss_dssp SEEEEEEEETTCSCHHHHHHHHCSCCTTEEEEEEES--CHHHHHHHHHHHHHCHHHHHHHTEEECCT-TSHHH-HGGGHH
T ss_pred CCcEEEEeCCCCCCHHHHHHHHhcCCCeEEEeecCC--CHHHHHHHHHHHHhccccccccceEeCCC-CCHHH-HHhHHH
Confidence 99999999998 9999999999997 465 55554 59999999999877542 4666665 57776 789999
Q ss_pred HHHHHHHhhCCCCCE---EEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372 163 TGPEIWQDSGGKVDA---FISGIGTGGTVTGAGRFLKENNPDIKVVLRV 208 (210)
Q Consensus 163 ~~~Ei~~q~~~~~d~---vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~ 208 (210)
+++||++|++ .+|. |+||+|+||+++|++.+.+...|..|+|+|+
T Consensus 238 ~~~Ei~~ql~-~~d~~v~vvVPvG~GG~i~g~~~Ak~mGlPi~kli~a~ 285 (468)
T 4f4f_A 238 YYFTAALSLG-APDRAVSFTVPTGNFGDIFAGYVAKRMGLPIEQLIIAT 285 (468)
T ss_dssp HHHHHHHHTT-TTSSCEEEEEECSSSHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred HHHHHHHhcc-cCCCCeEEEEEeCCcHHHHHHHHHHHhCCCCCEEEEEe
Confidence 9999999994 7898 9999999999999999865556888999884
No 41
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=100.00 E-value=1.1e-31 Score=238.62 Aligned_cols=185 Identities=15% Similarity=0.059 Sum_probs=143.1
Q ss_pred cccCCceee--cccccCCCCceEEEEeCCCCCCCchhhHHHHHHHH---HHH-HcCC-----CCCCCeEEEeeCCCchHH
Q 028372 14 LIGNTPMVY--LNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIK---DAE-DKGL-----ITPGKTTLIEVTSGNTGV 82 (210)
Q Consensus 14 ~~~~TPl~~--~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~---~a~-~~g~-----~~~~~~~vv~~ssGN~g~ 82 (210)
..+.|||++ ++++ .+||+|.|++|||||||||++.+++. .+. ++|. +.++ .+|+++||||||.
T Consensus 93 ~~g~TPLv~~~l~~l-----~~l~~K~e~~nPTgSFKDrga~~~~~~~~~a~~~~g~~~~~~~~~~-~~Iv~ATSGNtG~ 166 (514)
T 1kl7_A 93 SDEVTPLVQNVTGDK-----ENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQ-ITVVGATSGDTGS 166 (514)
T ss_dssp STTSSCEECCTTCSS-----SCEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCCC-EEEEEECSSSHHH
T ss_pred CCCCCceeehhcccc-----cchhhhhhccCCCCcHHHHHHHHHHHHHHHHHHhcCCccccccCCC-CEEEECCCCcHHH
Confidence 366799999 7655 47999999999999999999999844 442 3452 3333 7899999999999
Q ss_pred HHHHHH--HHcCCcEEEEEcCC-CCHHHHHHHHH-cCC--EEEEECCCCCHHHHHHHHHHHHHhCC--CeEEcCCCCCCh
Q 028372 83 GLAFIA--AARGYNLIIVMPST-CSMERRIVLRA-LGA--EIILADSALRFEEILEKGEEILKKTP--DGYLLRQFENPA 154 (210)
Q Consensus 83 alA~~a--~~~g~~~~vvvp~~-~~~~~~~~~~~-~Ga--~v~~v~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~n~~ 154 (210)
| |++| +..|++++|++|++ +++.++.+|.. +|+ +++.++ ++++++++.+++++++.+ +.+.+ .+.|+.
T Consensus 167 A-A~~a~a~~~Gi~~~I~~P~~~~S~~q~~qm~~~~g~~~~vv~v~--g~fdda~~~vk~l~~~~~~~~~~~~-~~~Ns~ 242 (514)
T 1kl7_A 167 A-AIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVT--GTFDNCQDIVKAIFGDKEFNSKHNV-GAVNSI 242 (514)
T ss_dssp H-HHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEES--SCHHHHHHHHHHHHHCSSCC--CCB-CCCCSC
T ss_pred H-HHHHHHhhcCCeEEEEEcCCCCCHHHHHHHhhhcCCCEEEEEcC--CCHHHHHHHHHHHHhccccccccee-EeeCCC
Confidence 9 5555 88999999999997 89987777743 455 555555 469999999999988753 11111 234444
Q ss_pred hH--HHHHHhHHHHHHHhh-C---CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372 155 NP--KIHYETTGPEIWQDS-G---GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV 208 (210)
Q Consensus 155 ~~--~~g~~t~~~Ei~~q~-~---~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~ 208 (210)
|| +.|+.+.++|+++|+ + +.+|+||+|+|+||++.|++.+.+...|..|+|+|.
T Consensus 243 N~~ri~gQ~tyy~e~~~ql~~~~~~~~d~~vvP~GngG~i~a~~~ak~~G~p~~rli~v~ 302 (514)
T 1kl7_A 243 NWARILAQMTYYFYSFFQATNGKDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKLAIAT 302 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSSSSCCCEEEEEECSSSHHHHHHHHHHHHTCCCCCEEEEE
T ss_pred CHhHHhhHHHHHHHHHHHHhhhcCCCCcEEEEECCchHHHHHHHHHHHcCCCCCEEEEEe
Confidence 43 568999999999998 4 358999999999999999997666657888999985
No 42
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=99.97 E-value=8.1e-31 Score=230.87 Aligned_cols=180 Identities=15% Similarity=0.111 Sum_probs=147.2
Q ss_pred CceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHH---HHHHH-HcCCCCCCCeEEEeeCCCchHHHHHHHHH-HcC
Q 028372 18 TPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSM---IKDAE-DKGLITPGKTTLIEVTSGNTGVGLAFIAA-ARG 92 (210)
Q Consensus 18 TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~---~~~a~-~~g~~~~~~~~vv~~ssGN~g~alA~~a~-~~g 92 (210)
|||+++..- -+.++|+|.|++|||||||||++.++ +..+. ++|. ..+|+++||||||.|.|++++ ..|
T Consensus 103 ~Pl~~l~~~---~~~~l~vkee~~~PTgSFKDRga~~~~~ll~~a~~~~g~----~~~Vv~ASSGNtG~Aaa~a~~~~~G 175 (487)
T 3v7n_A 103 TPLTTLGTE---NGAPVSLLELSNGPTLAFKDMAMQLLGNLFEYTLAKHGE----TLNILGATSGDTGSAAEYAMRGKEG 175 (487)
T ss_dssp SCEEEEEEE---TTEEEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHTTTC----CEEEEEECSSHHHHHHHHHHTTCTT
T ss_pred ceeEEecCC---CCcceeHHhhccCCcCcHHHHHHHHHHHHHHHHHHhcCC----CcEEEEeCChHHHHHHHHHHHhccC
Confidence 799887420 01139999999999999999999998 77775 4554 256999999999999888876 899
Q ss_pred CcEEEEEcCC-CCHHHHHHHHHcCC---EEEEECCCCCHHHHHHHHHHHHHhC-----CCeEEcCCCCCChhHHHHHHhH
Q 028372 93 YNLIIVMPST-CSMERRIVLRALGA---EIILADSALRFEEILEKGEEILKKT-----PDGYLLRQFENPANPKIHYETT 163 (210)
Q Consensus 93 ~~~~vvvp~~-~~~~~~~~~~~~Ga---~v~~v~~~~~~~~~~~~a~~~~~~~-----~~~~~~~~~~n~~~~~~g~~t~ 163 (210)
++++|++|++ +++.|+++|+.+|+ +++.+++ +++++++.++++.++. -+.++++++ |+.. +.|+.+.
T Consensus 176 i~~~I~~P~~~~s~~k~~qm~~~Ga~nv~vv~v~G--~fDda~~~vk~~~~d~~~~~~~~l~~vns~-Np~r-i~gQ~ty 251 (487)
T 3v7n_A 176 VRVFMLSPHKKMSAFQTAQMYSLQDPNIFNLAVNG--VFDDCQDIVKAVSNDHAFKAQQKIGTVNSI-NWAR-VVAQVVY 251 (487)
T ss_dssp EEEEEEEETTCSCHHHHHHHHTCCCTTEEEEEEES--CHHHHHHHHHHHHTCHHHHHHTTEECCSTT-CHHH-HHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHhcCCCcEEEEEECC--CHHHHHHHHHHhhhchHHHhhcCeeeeCCC-CHHH-HHhHHHH
Confidence 9999999997 99999999999998 6777775 5899999998887631 256677664 6776 7899988
Q ss_pred HHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372 164 GPEIWQDSG---GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV 208 (210)
Q Consensus 164 ~~Ei~~q~~---~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~ 208 (210)
++|+..|+. +.+|+|+||+|+||+++|++.+.+...|..|+|++.
T Consensus 252 y~~~~~el~~~~~~~d~vvVP~GngG~i~g~~~A~~mGlp~~rli~a~ 299 (487)
T 3v7n_A 252 YFKGYFAATRSNDERVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVAT 299 (487)
T ss_dssp HHHHHHHTCSSTTCCEEEEEGGGCHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred HHHHHHHHHhcCCCCcEEEEecCchHHHHHHHHHHHcCCCCceEEEEe
Confidence 888888873 359999999999999999998876666877999874
No 43
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.27 E-value=0.16 Score=36.33 Aligned_cols=51 Identities=24% Similarity=0.242 Sum_probs=38.6
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
..++..+.|..|..+|...+..|++++++-. .+.+.+.++..|..++.-+.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~~~~~g~~~i~gd~ 58 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIET---SRTRVDELRERGVRAVLGNA 58 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEESCT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHHHcCCCEEECCC
Confidence 3467778899999999999999999888755 35566666667777655443
No 44
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=94.52 E-value=0.43 Score=36.56 Aligned_cols=76 Identities=21% Similarity=0.319 Sum_probs=57.7
Q ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE-------c--CCCCHHHHHHHH
Q 028372 42 EPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM-------P--STCSMERRIVLR 112 (210)
Q Consensus 42 ~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv-------p--~~~~~~~~~~~~ 112 (210)
+|.--+=+......+.+|.+.|. +..|+.+++|.++..++-+. -|+++++|. | ...++..++.++
T Consensus 22 ~~G~eNT~~tl~la~era~e~~I----k~iVVAS~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 95 (201)
T 1vp8_A 22 KPGRENTEETLRLAVERAKELGI----KHLVVASSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELR 95 (201)
T ss_dssp SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 34446677788888899999885 35566667798886665533 689999998 3 245899999999
Q ss_pred HcCCEEEEECC
Q 028372 113 ALGAEIILADS 123 (210)
Q Consensus 113 ~~Ga~v~~v~~ 123 (210)
..|.+|+.-..
T Consensus 96 ~~G~~V~t~tH 106 (201)
T 1vp8_A 96 KRGAKIVRQSH 106 (201)
T ss_dssp HTTCEEEECCC
T ss_pred hCCCEEEEEec
Confidence 99999998664
No 45
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.44 E-value=1.1 Score=33.26 Aligned_cols=50 Identities=22% Similarity=0.188 Sum_probs=37.2
Q ss_pred EEEeeCCCchHHHHHHHHHHc-CCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 71 TLIEVTSGNTGVGLAFIAAAR-GYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~~-g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
.++....|..|..+|...+.. |.+++++-. .+.+.+.++..|.+++..+.
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~---~~~~~~~~~~~g~~~~~gd~ 91 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEI---REEAAQQHRSEGRNVISGDA 91 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEES---CHHHHHHHHHTTCCEEECCT
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEEC---CHHHHHHHHHCCCCEEEcCC
Confidence 355567899999999999888 999888744 35666667777877665443
No 46
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.27 E-value=1 Score=38.58 Aligned_cols=96 Identities=18% Similarity=0.318 Sum_probs=61.6
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (210)
..|+....|..|..+|..-+..|++++++-. .+.+.+.++..|.+++.-+... .
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~---d~~~v~~~~~~g~~vi~GDat~--~--------------------- 58 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDH---DPDHIETLRKFGMKVFYGDATR--M--------------------- 58 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEEC---CHHHHHHHHHTTCCCEESCTTC--H---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHHhCCCeEEEcCCCC--H---------------------
Confidence 3477778899999999999999999888743 3556666666666655444321 1
Q ss_pred CCCChhHHHHHHhHHHHHHHhhC-CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEE
Q 028372 150 FENPANPKIHYETTGPEIWQDSG-GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLR 207 (210)
Q Consensus 150 ~~n~~~~~~g~~t~~~Ei~~q~~-~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv 207 (210)
+++++.+ .+.|.||++++.-....-++...|+.+|+++||+-
T Consensus 59 ----------------~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 59 ----------------DLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp ----------------HHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred ----------------HHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCCCCeEEEE
Confidence 1122211 24567777777666666666666677777776653
No 47
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.15 E-value=0.46 Score=38.92 Aligned_cols=60 Identities=28% Similarity=0.279 Sum_probs=47.0
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
+.+.+++|++.+|...+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+....
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~~ 193 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS---SPEKAAHAKALGAWETIDYS 193 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEEETT
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEeCC
Confidence 4567788877777777899999999999999998776654 56788888889997665443
No 48
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.90 E-value=0.69 Score=37.93 Aligned_cols=61 Identities=21% Similarity=0.321 Sum_probs=47.2
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~ 124 (210)
+.+.+++|++.+|...+|..|.+.+..++..|.+++++.+ ++.+++.++.+|++.+....+
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~~~~~ 202 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS---TDEKLKIAKEYGAEYLINASK 202 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEETTT
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEEeCCC
Confidence 4456788877777776899999999999999998766654 467888889999986655433
No 49
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.78 E-value=0.77 Score=37.62 Aligned_cols=60 Identities=23% Similarity=0.284 Sum_probs=46.8
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHH-HHcCCEEEEECC
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVL-RALGAEIILADS 123 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~-~~~Ga~v~~v~~ 123 (210)
+.+.+++|++.+|...+|..|.+++..++..|.+++++.. ++.+++.+ +.+|++.+....
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~~g~~~~~~~~ 203 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG---GAEKCRFLVEELGFDGAIDYK 203 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCCSEEEETT
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCCEEEECC
Confidence 5667888878778777899999999999999998766643 45677777 889997655433
No 50
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.67 E-value=0.98 Score=37.11 Aligned_cols=63 Identities=22% Similarity=0.180 Sum_probs=47.1
Q ss_pred HHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372 58 DAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (210)
Q Consensus 58 ~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~ 124 (210)
.+.+...+++|.+.+|.+ +|..|.+.+..|+.+|.+++++.. ++.+++.++.+|++.+....+
T Consensus 157 ~~l~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~i~~~~ 219 (340)
T 3s2e_A 157 KGLKVTDTRPGQWVVISG-IGGLGHVAVQYARAMGLRVAAVDI---DDAKLNLARRLGAEVAVNARD 219 (340)
T ss_dssp HHHHTTTCCTTSEEEEEC-CSTTHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHTTCSEEEETTT
T ss_pred HHHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHcCCCEEEeCCC
Confidence 344566778887766654 588999999999999997666543 577888899999987655443
No 51
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=93.63 E-value=0.49 Score=40.62 Aligned_cols=55 Identities=24% Similarity=0.337 Sum_probs=45.3
Q ss_pred CCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 63 GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 63 g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
..+++|++.+|...+|..|.+.+..|+..|.+++++.. ++.+++.++.+|++.+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~---~~~~~~~~~~lGa~~~i 270 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVS---SAQKEAAVRALGCDLVI 270 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCCCEE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCCEEE
Confidence 56788877777777799999999999999998877763 67888889999997654
No 52
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.43 E-value=0.69 Score=38.38 Aligned_cols=61 Identities=20% Similarity=0.157 Sum_probs=47.4
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~ 124 (210)
+...+++|++.+|.+.+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+....+
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~~~~~ 221 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG---STGKCEACERLGAKRGINYRS 221 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEEETTT
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCCEEEeCCc
Confidence 5567888877777778899999999999999998666543 567788888899986654433
No 53
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=93.32 E-value=1.7 Score=34.59 Aligned_cols=55 Identities=16% Similarity=0.109 Sum_probs=33.1
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEEC
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILAD 122 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~ 122 (210)
|+..+||.+++.-|.++|..-...|.+++++-.... .....+.++..|.+++.+.
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~ 62 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK 62 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence 347788888888888888877777776655432211 1222334455566555444
No 54
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.11 E-value=1 Score=37.48 Aligned_cols=58 Identities=26% Similarity=0.292 Sum_probs=45.3
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
+...+++|.+.+|.. +|..|.+.+..|+.+|.+++++.+ ++.+++.++.+|++.+...
T Consensus 183 ~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi~~ 240 (363)
T 3uog_A 183 EKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSS---SREKLDRAFALGADHGINR 240 (363)
T ss_dssp TTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEEET
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEec---CchhHHHHHHcCCCEEEcC
Confidence 566788887766665 899999999999999998776643 5678888899999765543
No 55
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.05 E-value=1.1 Score=37.29 Aligned_cols=59 Identities=22% Similarity=0.307 Sum_probs=45.2
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
+.+.+++|++.+|...+|..|.+++..++..|.+++++.+ ++.+++.++.+|++.+...
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~ 215 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS---SDEKSAFLKSLGCDRPINY 215 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEET
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHHcCCcEEEec
Confidence 4456778877677666899999999999999998666554 4677788888999765543
No 56
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=93.03 E-value=0.55 Score=39.32 Aligned_cols=53 Identities=19% Similarity=0.066 Sum_probs=42.0
Q ss_pred CCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 66 TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 66 ~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
++|.+.+|.+.+|..|.+.+..|+.+|.+++++. ++.+++.++.+|++.+...
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~vi~~ 215 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC----SPHNFDLAKSRGAEEVFDY 215 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEET
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CHHHHHHHHHcCCcEEEEC
Confidence 5676767777779999999999999999876654 4678889999999765543
No 57
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=93.02 E-value=2.1 Score=34.09 Aligned_cols=30 Identities=33% Similarity=0.388 Sum_probs=22.0
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEE
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLII 97 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~v 97 (210)
|+..+||.+++.-|.++|..-...|.++++
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi 38 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVIL 38 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 457788888888888888777766665444
No 58
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.01 E-value=0.8 Score=37.78 Aligned_cols=59 Identities=25% Similarity=0.417 Sum_probs=45.9
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
+.+.+++|++.+|...+|..|.+++..++.+|.+++++.. ++.+++.++.+|++.+...
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~v~~~ 211 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVN---RTAATEFVKSVGADIVLPL 211 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SGGGHHHHHHHTCSEEEES
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCcEEecC
Confidence 5667888877777777799999999999999998777665 3456677788899766543
No 59
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=92.95 E-value=1.7 Score=34.03 Aligned_cols=54 Identities=19% Similarity=0.246 Sum_probs=37.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
+..+|+..+|.-|.++|..-...|.+++++..... ....+.++..|.++..+..
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~ 58 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APALAEIARHGVKAVHHPA 58 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHTTSCCEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhcCCceEEEeC
Confidence 47788888999999999988888988776544332 3344455555666655543
No 60
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.80 E-value=0.68 Score=38.13 Aligned_cols=61 Identities=18% Similarity=0.229 Sum_probs=45.7
Q ss_pred HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
.+...+++|++.+|...+|..|.+++..++.+|.+++++.... .+++.++.+|++.+....
T Consensus 137 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~---~~~~~~~~lga~~~~~~~ 197 (340)
T 3gms_A 137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN---KHTEELLRLGAAYVIDTS 197 (340)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS---TTHHHHHHHTCSEEEETT
T ss_pred HHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHhCCCcEEEeCC
Confidence 3566788887777777778999999999999999877766533 455666778997665443
No 61
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=92.46 E-value=1 Score=36.75 Aligned_cols=61 Identities=26% Similarity=0.351 Sum_probs=45.9
Q ss_pred HHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 58 DAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 58 ~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
.+.+...+++|.+.+|...+|..|.+.+..|+.+|.+++++. ...+++.++.+|++-+.-.
T Consensus 143 ~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~----~~~~~~~~~~lGa~~~i~~ 203 (321)
T 3tqh_A 143 QALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA----SKRNHAFLKALGAEQCINY 203 (321)
T ss_dssp HHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----CHHHHHHHHHHTCSEEEET
T ss_pred HHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe----ccchHHHHHHcCCCEEEeC
Confidence 344667788887766666689999999999999999876654 3456788899999855443
No 62
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=92.45 E-value=1.7 Score=34.66 Aligned_cols=55 Identities=7% Similarity=-0.037 Sum_probs=40.1
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
|+..+||.+++.-|.++|..-...|.+++++-.........+.++..|.++..+.
T Consensus 7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~ 61 (258)
T 4gkb_A 7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLP 61 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEE
Confidence 4577888888889999998888889888877766555555566666666555544
No 63
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=92.44 E-value=2.6 Score=33.33 Aligned_cols=56 Identities=27% Similarity=0.325 Sum_probs=37.3
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--------HHHHHHHHHcCCEEEEECC
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--------MERRIVLRALGAEIILADS 123 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--------~~~~~~~~~~Ga~v~~v~~ 123 (210)
++..+|+..+|--|.++|..-...|.+++++...... ......++..|.++..+..
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKC 69 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEEC
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeC
Confidence 3477889999999999999888889987777654322 2223334445666655543
No 64
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.39 E-value=1.3 Score=36.54 Aligned_cols=54 Identities=30% Similarity=0.340 Sum_probs=44.4
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEE
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEI 118 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v 118 (210)
+...+++|++.+|...+|..|.+++..|+..|.+++++ .++.+++.++.+|++.
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~----~~~~~~~~~~~lGa~~ 197 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT----ARGSDLEYVRDLGATP 197 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE----ECHHHHHHHHHHTSEE
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE----eCHHHHHHHHHcCCCE
Confidence 56778888777777768999999999999999986665 3467788889999988
No 65
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=92.01 E-value=1.2 Score=36.81 Aligned_cols=66 Identities=20% Similarity=0.303 Sum_probs=45.7
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372 52 AYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (210)
Q Consensus 52 a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~ 124 (210)
++.++..+...| ++..+|.+.+|..|.+.+..|+.+|.+++++.+ ++.+++.++.+|++.+....+
T Consensus 153 a~~~~~~~~~~g----~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~~~ 218 (349)
T 3pi7_A 153 AIAMFDIVKQEG----EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVR---RDEQIALLKDIGAAHVLNEKA 218 (349)
T ss_dssp HHHHHHHHHHHC----CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---CGGGHHHHHHHTCSEEEETTS
T ss_pred HHHHHHHHhhCC----CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEECCc
Confidence 444444444333 135566678899999999999999998776654 455677788899976655443
No 66
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=91.90 E-value=1.9 Score=35.25 Aligned_cols=65 Identities=20% Similarity=0.174 Sum_probs=47.7
Q ss_pred HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCC
Q 028372 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126 (210)
Q Consensus 59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~ 126 (210)
+.....+++|++.+|. .+|.-|...+..|+.+|.+.++++.. ++.|++.++.+||+.+....+.+
T Consensus 152 ~~~~~~~~~g~~VlV~-GaG~vG~~aiq~ak~~G~~~vi~~~~--~~~k~~~a~~lGa~~~i~~~~~~ 216 (346)
T 4a2c_A 152 AFHLAQGCENKNVIII-GAGTIGLLAIQCAVALGAKSVTAIDI--SSEKLALAKSFGAMQTFNSSEMS 216 (346)
T ss_dssp HHHHTTCCTTSEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHHTTCSEEEETTTSC
T ss_pred HHHHhccCCCCEEEEE-CCCCcchHHHHHHHHcCCcEEEEEec--hHHHHHHHHHcCCeEEEeCCCCC
Confidence 3455566777665554 56888988889999999998777643 57788899999998776554433
No 67
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=91.77 E-value=2 Score=36.12 Aligned_cols=57 Identities=26% Similarity=0.267 Sum_probs=42.1
Q ss_pred HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372 60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (210)
Q Consensus 60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~ 119 (210)
.+...+++|.+.+|.. +|.-|...+..|+.+|.+.++.+. .++.+++.++.+|++++
T Consensus 178 l~~~~~~~g~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~i 234 (398)
T 1kol_A 178 AVTAGVGPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGD--LNPARLAHAKAQGFEIA 234 (398)
T ss_dssp HHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCEEE
T ss_pred HHHcCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCCeEEEEc--CCHHHHHHHHHcCCcEE
Confidence 3455677886666654 799999999999999995444443 25778888999999854
No 68
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=91.75 E-value=2.4 Score=35.06 Aligned_cols=57 Identities=21% Similarity=0.336 Sum_probs=44.5
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
+...++++++.+|...+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+.
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~ 220 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG---TEEGQKIVLQNGAHEVF 220 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---ChhHHHHHHHcCCCEEE
Confidence 3566788878788777899999999999999998666544 35677778889987544
No 69
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=91.68 E-value=3.3 Score=34.30 Aligned_cols=55 Identities=22% Similarity=0.247 Sum_probs=38.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--------HHHHHHHHHcCCEEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--------MERRIVLRALGAEIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--------~~~~~~~~~~Ga~v~~v~~ 123 (210)
+..+|+..+|--|.++|......|.+++++...... ....+.++..|.++..+..
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~ 108 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIV 108 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEc
Confidence 477888888999999999988889988887665432 1334455666766665543
No 70
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.68 E-value=1.9 Score=35.38 Aligned_cols=59 Identities=22% Similarity=0.209 Sum_probs=44.6
Q ss_pred HHHc-CCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 59 AEDK-GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 59 a~~~-g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
+..+ ..++++++.+|...+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+.
T Consensus 157 al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~ga~~~~ 216 (343)
T 2eih_A 157 MVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG---SEDKLRRAKALGADETV 216 (343)
T ss_dssp HHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred HHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCCEEE
Confidence 3433 46778878788888799999999999999998766544 46677777788986543
No 71
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=91.57 E-value=1.4 Score=36.93 Aligned_cols=65 Identities=23% Similarity=0.336 Sum_probs=45.7
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEee-CCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372 52 AYSMIKDAEDKGLITPGKTTLIEV-TSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (210)
Q Consensus 52 a~~~~~~a~~~g~~~~~~~~vv~~-ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~ 124 (210)
++.++..+.+ +|.+.+|.. .+|..|.+.+..|+.+|.+++++.. ++.+++.++.+|++.+....+
T Consensus 160 a~~~~~~~~~-----~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~~~~~ 225 (379)
T 3iup_A 160 ALGMVETMRL-----EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVR---KQEQADLLKAQGAVHVCNAAS 225 (379)
T ss_dssp HHHHHHHHHH-----TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEES---SHHHHHHHHHTTCSCEEETTS
T ss_pred HHHHHHHhcc-----CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHhCCCcEEEeCCC
Confidence 4444444443 334556653 7899999999999999998777653 578888999999976554433
No 72
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=91.49 E-value=2.1 Score=33.98 Aligned_cols=44 Identities=25% Similarity=0.167 Sum_probs=30.6
Q ss_pred CeEEEeeCCCc--hHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHH
Q 028372 69 KTTLIEVTSGN--TGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRA 113 (210)
Q Consensus 69 ~~~vv~~ssGN--~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~ 113 (210)
+..+|+..+|+ -|.++|..-...|.+++++.... .....+.+..
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~ 72 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCA 72 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHG
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHH
Confidence 46788887777 88888888888898877766554 4445555543
No 73
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=91.43 E-value=2.2 Score=33.10 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=25.7
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++-.
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r 41 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADI 41 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcC
Confidence 47788888899999999888888888666543
No 74
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=91.33 E-value=2.1 Score=34.93 Aligned_cols=57 Identities=23% Similarity=0.303 Sum_probs=43.6
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
+.+.++++++.+|+..+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+.
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~g~~~~~ 195 (333)
T 1wly_A 139 QTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS---TEEKAETARKLGCHHTI 195 (333)
T ss_dssp TTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred HhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence 3566788877777777899999999999999998766654 35667777778887554
No 75
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=91.30 E-value=2.8 Score=31.27 Aligned_cols=57 Identities=28% Similarity=0.434 Sum_probs=42.4
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
+...+++|++.+|+..+|..|.+++..++..|.+++++.. ++.+.+.++.+|++.+.
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~ 88 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG---SDAKREMLSRLGVEYVG 88 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHTTCCSEEE
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEEe
Confidence 3456777877777776899999999999999998766543 35666677788986543
No 76
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=91.29 E-value=2.4 Score=33.74 Aligned_cols=54 Identities=17% Similarity=0.140 Sum_probs=35.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|.-|.++|..-...|.+++++..... .....+.++..|.++..+.
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 87 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIR 87 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 47788999999999999988888988777765422 1223334445555444443
No 77
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=91.23 E-value=3.3 Score=31.95 Aligned_cols=55 Identities=22% Similarity=0.216 Sum_probs=36.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC-CCCH-HHHHHHHHcCCEEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS-TCSM-ERRIVLRALGAEIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~-~~~~-~~~~~~~~~Ga~v~~v~~ 123 (210)
++.+|+..+|.-|.++|..-...|.+++++... .... ...+.++..|.++..+..
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA 64 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEEC
Confidence 467888889999999999888889988777654 2222 223344445666555543
No 78
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=91.19 E-value=3.3 Score=32.17 Aligned_cols=53 Identities=21% Similarity=0.252 Sum_probs=35.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|.-|.++|..-...|.+++++..... ....+.++..|.++..+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~ 60 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPA-PEAEAAIRNLGRRVLTVK 60 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC-HHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch-hHHHHHHHhcCCcEEEEE
Confidence 47789999999999999998888988777654331 221224455666665544
No 79
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=91.17 E-value=1.4 Score=36.41 Aligned_cols=60 Identities=27% Similarity=0.361 Sum_probs=46.6
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEE
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIIL 120 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~ 120 (210)
+.+.+++|.+.+|.+.+|..|.+.+..|+.+|.++++++..... ..+++.++.+|++-+.
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi 221 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI 221 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE
Confidence 44667888776776667999999999999999998888866543 4567788899997544
No 80
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=91.16 E-value=2.1 Score=33.58 Aligned_cols=54 Identities=13% Similarity=0.109 Sum_probs=33.6
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|--|.++|..-...|.+++++...... ....+.++..|.++..+.
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 84 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHA 84 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEE
Confidence 477888888889999988888888887666443211 122233344455555443
No 81
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.08 E-value=2.5 Score=34.75 Aligned_cols=59 Identities=27% Similarity=0.260 Sum_probs=43.9
Q ss_pred HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHc-CCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372 60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAAR-GYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (210)
Q Consensus 60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~-g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v 121 (210)
.++..++++++.+|+..+|..|.+++..++.. |.+++++.. ++.+++.++.+|++.+..
T Consensus 163 l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~~ 222 (347)
T 1jvb_A 163 VRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV---REEAVEAAKRAGADYVIN 222 (347)
T ss_dssp HHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES---SHHHHHHHHHHTCSEEEE
T ss_pred HHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCCEEec
Confidence 34456778877777777779999999999999 998665543 356777778889875543
No 82
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=91.06 E-value=3.1 Score=33.85 Aligned_cols=57 Identities=21% Similarity=0.320 Sum_probs=43.7
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
+...+++|+..+|+..+|..|.+++..++..|.+++++.. ++.+++.++.+|++...
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~ 195 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG---SDEKIAYLKQIGFDAAF 195 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCcEEE
Confidence 4556778878788888899999999999999997766543 35666777888986543
No 83
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.04 E-value=2.3 Score=35.11 Aligned_cols=58 Identities=17% Similarity=0.176 Sum_probs=44.3
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v 121 (210)
+.+.+++|+..+|+..+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+.-
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~~ 213 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG---SQKKLQMAEKLGAAAGFN 213 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEEE
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCcEEEe
Confidence 4566778877777777899999999999999998766544 456777778889875543
No 84
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=90.90 E-value=5 Score=31.73 Aligned_cols=30 Identities=27% Similarity=0.290 Sum_probs=22.4
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIV 98 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vv 98 (210)
+..+|+..+|--|.++|..-...|.+++++
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~ 56 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILIN 56 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 477888888888888888777777765543
No 85
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=90.90 E-value=2.7 Score=33.06 Aligned_cols=53 Identities=25% Similarity=0.248 Sum_probs=37.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
+..+|+..+|.-|.++|..-...|.+++++...... ..+.++..+...+.++-
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~Dv 80 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHA--SVTELRQAGAVALYGDF 80 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCH--HHHHHHHHTCEEEECCT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHhcCCeEEECCC
Confidence 367888888999999999988889998877654322 23444555666665554
No 86
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.83 E-value=2.4 Score=34.43 Aligned_cols=56 Identities=21% Similarity=0.201 Sum_probs=43.4
Q ss_pred cCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 62 KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 62 ~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
...++++++.+|+..+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+.
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~ 190 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---TAQKAQSALKAGAWQVI 190 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence 566788877777777899999999999999997766544 35667777778887544
No 87
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=90.70 E-value=2.4 Score=32.90 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=26.5
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|......|.+++++..
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r 45 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADL 45 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 47789999999999999988888888777654
No 88
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=90.66 E-value=1.9 Score=35.58 Aligned_cols=59 Identities=19% Similarity=0.094 Sum_probs=43.6
Q ss_pred HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCC-cEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRALGAEIILA 121 (210)
Q Consensus 59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~-~~~vvvp~~~~~~~~~~~~~~Ga~v~~v 121 (210)
+.+...+++|.+.+|.. +|..|.+.+..|+.+|. +++++ . .++.+++.++.+|++.+..
T Consensus 158 al~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~-~--~~~~~~~~~~~lGa~~vi~ 217 (352)
T 3fpc_A 158 GAELANIKLGDTVCVIG-IGPVGLMSVAGANHLGAGRIFAV-G--SRKHCCDIALEYGATDIIN 217 (352)
T ss_dssp HHHHTTCCTTCCEEEEC-CSHHHHHHHHHHHTTTCSSEEEE-C--CCHHHHHHHHHHTCCEEEC
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEE-C--CCHHHHHHHHHhCCceEEc
Confidence 44566678887766664 69999999999999998 55554 2 3567888889999975543
No 89
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=90.64 E-value=2 Score=35.84 Aligned_cols=61 Identities=21% Similarity=0.216 Sum_probs=43.9
Q ss_pred HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
+.+...+++|.+.+|.+ +|..|.+.+..|+.+|.+.++.+. .++.+++.++.+|++.+...
T Consensus 174 ~l~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi~~ 234 (370)
T 4ej6_A 174 GVDLSGIKAGSTVAILG-GGVIGLLTVQLARLAGATTVILST--RQATKRRLAEEVGATATVDP 234 (370)
T ss_dssp HHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEC--SCHHHHHHHHHHTCSEEECT
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHcCCCEEECC
Confidence 34555677886666654 589999999999999995444443 35678888899999765543
No 90
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.64 E-value=3 Score=29.89 Aligned_cols=48 Identities=15% Similarity=0.179 Sum_probs=33.5
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHH-HcCCEEEE
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLR-ALGAEIIL 120 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~-~~Ga~v~~ 120 (210)
..++....|..|..+|...+..|.+++++-+. +.+.+.++ ..|..++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~---~~~~~~~~~~~g~~~~~ 68 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKN---EYAFHRLNSEFSGFTVV 68 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC---GGGGGGSCTTCCSEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECC---HHHHHHHHhcCCCcEEE
Confidence 34566678999999999999999988877553 23334444 56766544
No 91
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=90.61 E-value=2.6 Score=33.74 Aligned_cols=54 Identities=20% Similarity=0.235 Sum_probs=35.7
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|--|.++|..-...|.+++++...... ....+.++..|.+++.+.
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 103 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLP 103 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEE
Confidence 477889999999999999888889887776554321 122333445565555544
No 92
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=90.58 E-value=1.5 Score=36.36 Aligned_cols=58 Identities=22% Similarity=0.219 Sum_probs=43.9
Q ss_pred CCCCCC-CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEE
Q 028372 63 GLITPG-KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIIL 120 (210)
Q Consensus 63 g~~~~~-~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~ 120 (210)
+.+++| .+.+|.+.+|..|.+.+..|+.+|.++++++..... ..+++.++.+|++.+.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi 221 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI 221 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE
Confidence 567788 777777777999999999999999998887765444 3445666888987544
No 93
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=90.52 E-value=2.5 Score=33.53 Aligned_cols=54 Identities=17% Similarity=0.257 Sum_probs=34.4
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|--|.++|..-...|.+++++...... ....+.++..|.++..+.
T Consensus 30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 85 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 85 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEE
Confidence 477888888999999998888888887776544321 111233444555554443
No 94
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=90.50 E-value=3.3 Score=34.26 Aligned_cols=56 Identities=18% Similarity=0.162 Sum_probs=41.7
Q ss_pred CCCCCCCeEEEeeCCCchHHHHHHHHHHc-CCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 63 GLITPGKTTLIEVTSGNTGVGLAFIAAAR-GYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 63 g~~~~~~~~vv~~ssGN~g~alA~~a~~~-g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
..+++|.+.+|... |..|...+..|+.+ |.+++++.+ ++.+++.++.+|++.+.-.
T Consensus 182 ~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi~~ 238 (359)
T 1h2b_A 182 RTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDV---KEEKLKLAERLGADHVVDA 238 (359)
T ss_dssp TTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEES---SHHHHHHHHHTTCSEEEET
T ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHHHHhCCCEEEec
Confidence 66778866555555 88999989999999 997655543 4678888899999755443
No 95
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=90.49 E-value=3.1 Score=32.77 Aligned_cols=55 Identities=15% Similarity=0.185 Sum_probs=35.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~~ 123 (210)
+..+|+..+|.-|.++|..-...|.++++....+.. ....+.++..|.++..+..
T Consensus 27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (272)
T 4e3z_A 27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG 83 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEc
Confidence 367888888999999999888889887665443321 1223344555666655543
No 96
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=90.49 E-value=3.9 Score=32.57 Aligned_cols=34 Identities=35% Similarity=0.372 Sum_probs=27.7
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST 102 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~ 102 (210)
+..+|+..+|.-|.++|..-...|.+++++....
T Consensus 10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence 4778888889999999998888899887776543
No 97
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=90.39 E-value=3.5 Score=33.85 Aligned_cols=59 Identities=20% Similarity=0.294 Sum_probs=43.3
Q ss_pred HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
+.++..+++|++.+|+..+|..|.+++..++..|.+++++.+. +.+.+.++.+|++.+.
T Consensus 161 ~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~---~~~~~~~~~~g~~~~~ 219 (347)
T 2hcy_A 161 ALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG---EGKEELFRSIGGEVFI 219 (347)
T ss_dssp HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS---TTHHHHHHHTTCCEEE
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC---HHHHHHHHHcCCceEE
Confidence 3444457788787888888999999999999999987766543 3445667778986443
No 98
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=90.38 E-value=1.5 Score=37.71 Aligned_cols=57 Identities=33% Similarity=0.362 Sum_probs=46.5
Q ss_pred CCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 63 GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 63 g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
..+++|.+.+|...+|..|.+.+..|+.+|.+++++.. ++.+++.++.+|++.+...
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~---~~~~~~~~~~lGa~~vi~~ 280 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVS---SPQKAEICRAMGAEAIIDR 280 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCCEEEET
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC---CHHHHHHHHhhCCcEEEec
Confidence 56788877677666799999999999999998887763 6788999999999766544
No 99
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.32 E-value=3.7 Score=29.30 Aligned_cols=30 Identities=13% Similarity=0.177 Sum_probs=24.8
Q ss_pred EEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 72 vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
++....|..|..++..-...|.+++++-+.
T Consensus 6 vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 6 FIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 455568999999999988899998888654
No 100
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=90.26 E-value=2.7 Score=32.87 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=25.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 34 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADL 34 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 46788889999999999888778888776644
No 101
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=90.25 E-value=2.8 Score=33.10 Aligned_cols=32 Identities=19% Similarity=0.058 Sum_probs=26.4
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++.+|+..+|--|.++|..-...|.+++++..
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r 63 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDI 63 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEc
Confidence 47788999999999999988888888776654
No 102
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=90.20 E-value=2.5 Score=34.03 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=26.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|......|.+++++..
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r 63 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDV 63 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 47788888899999999988888888766644
No 103
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=90.19 E-value=2.5 Score=32.66 Aligned_cols=54 Identities=19% Similarity=0.142 Sum_probs=34.7
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|.-|.++|..-...|.+++++...... ....+.++..|.++..+.
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 60 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLV 60 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence 467888888889999998888889887776553221 122333444555554443
No 104
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=90.15 E-value=2.9 Score=32.97 Aligned_cols=54 Identities=22% Similarity=0.185 Sum_probs=35.5
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|.-|.++|..-...|.+++++...... ....+.++..|.++..+.
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 85 (271)
T 4iin_A 30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIK 85 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEE
Confidence 477888888889999999888889887776654321 122334445555555444
No 105
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=90.10 E-value=2.9 Score=33.11 Aligned_cols=54 Identities=20% Similarity=0.235 Sum_probs=33.6
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|--|.++|..-...|.+++++...... ....+.++..|.++..+.
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 59 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQV 59 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence 467888888888999988888888887666443211 112233444455555443
No 106
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=90.09 E-value=2.4 Score=33.19 Aligned_cols=54 Identities=13% Similarity=0.155 Sum_probs=33.4
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|--|.++|..-...|.+++++-..... ....+.++..|.++..+.
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 67 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLE 67 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 477888888888999888877778887665443211 122233444455554443
No 107
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=89.99 E-value=4.8 Score=31.16 Aligned_cols=32 Identities=16% Similarity=0.256 Sum_probs=25.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCc-EEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYN-LIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~-~~vvvp 100 (210)
++.+|+..+|--|.++|..-...|.+ ++++..
T Consensus 6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCcEEEEEec
Confidence 46788888899999999988888987 555443
No 108
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=89.98 E-value=3.9 Score=31.91 Aligned_cols=54 Identities=17% Similarity=0.089 Sum_probs=35.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|.-|.++|..-...|.+++++...... ....+.++..|.++..+.
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 64 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV 64 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 477899999999999999888889887776543211 111233344465655444
No 109
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=89.96 E-value=3.2 Score=32.59 Aligned_cols=33 Identities=24% Similarity=0.294 Sum_probs=26.5
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++..+|+..+|--|.++|..-...|.+++++-.
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence 347788999999999999988888888766644
No 110
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=89.94 E-value=3.9 Score=33.66 Aligned_cols=57 Identities=28% Similarity=0.417 Sum_probs=43.5
Q ss_pred HcCCCCCC--CeEEEeeCCCchHHHHHHHHHHcCC-cEEEEEcCCCCHHHHHHHHH-cCCEEEE
Q 028372 61 DKGLITPG--KTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRA-LGAEIIL 120 (210)
Q Consensus 61 ~~g~~~~~--~~~vv~~ssGN~g~alA~~a~~~g~-~~~vvvp~~~~~~~~~~~~~-~Ga~v~~ 120 (210)
+.+.++++ ++.+|+..+|..|.+++..++..|. +++++.. .+.+++.++. +|++.+.
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~---~~~~~~~~~~~~g~~~~~ 212 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICG---THEKCILLTSELGFDAAI 212 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTSCCSEEE
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeC---CHHHHHHHHHHcCCceEE
Confidence 45667788 7888888889999999999999999 7666544 3566677765 8986544
No 111
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=89.93 E-value=1.9 Score=36.02 Aligned_cols=59 Identities=31% Similarity=0.340 Sum_probs=44.5
Q ss_pred HHHcCC-CCCCCeEEEeeCCCchHHHHHHHHHHcC-CcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372 59 AEDKGL-ITPGKTTLIEVTSGNTGVGLAFIAAARG-YNLIIVMPSTCSMERRIVLRALGAEIILA 121 (210)
Q Consensus 59 a~~~g~-~~~~~~~vv~~ssGN~g~alA~~a~~~g-~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v 121 (210)
+.+... +++|.+.+|.. +|..|.+.+..|+.+| .+++++.+ ++.+++.++.+|++.+..
T Consensus 186 al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi~ 246 (380)
T 1vj0_A 186 AFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEEIGADLTLN 246 (380)
T ss_dssp HHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHHTTCSEEEE
T ss_pred HHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHHcCCcEEEe
Confidence 344556 77887766666 8999999999999999 57766654 467888888999975543
No 112
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=89.93 E-value=1.6 Score=33.52 Aligned_cols=75 Identities=21% Similarity=0.309 Sum_probs=54.5
Q ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE-------c--CCCCHHHHHHHH
Q 028372 42 EPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM-------P--STCSMERRIVLR 112 (210)
Q Consensus 42 ~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv-------p--~~~~~~~~~~~~ 112 (210)
+|.--+=+..+...+.+|.+.|. +..|+.+++|.++..++-+. -| ++++|. | ...++..++.++
T Consensus 30 ~~G~eNT~~tl~la~era~e~~I----k~iVVASssG~TA~k~~e~~--~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 102 (206)
T 1t57_A 30 EPGKENTERVLELVGERADQLGI----RNFVVASVSGETALRLSEMV--EG-NIVSVTHHAGFREKGQLELEDEARDALL 102 (206)
T ss_dssp SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHTTC--CS-EEEEECCCTTSSSTTCCSSCHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCCHHHHHHHHHc--cC-CEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 44446677888888899999885 35566666788876655533 45 777776 3 245889999999
Q ss_pred HcCCEEEEECC
Q 028372 113 ALGAEIILADS 123 (210)
Q Consensus 113 ~~Ga~v~~v~~ 123 (210)
..|.+|+.-..
T Consensus 103 ~~G~~V~t~tH 113 (206)
T 1t57_A 103 ERGVNVYAGSH 113 (206)
T ss_dssp HHTCEEECCSC
T ss_pred hCCCEEEEeec
Confidence 99999987664
No 113
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=89.92 E-value=3.6 Score=32.55 Aligned_cols=50 Identities=6% Similarity=0.051 Sum_probs=32.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v 121 (210)
++.+||.+++.-|.++|..-...|.++++.-. ...+.+.+...+.++..+
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~---~~~~~~~~~~~~~~~~~~ 52 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDI---DEKRSADFAKERPNLFYF 52 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHTTCTTEEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHhcCCEEEE
Confidence 46788888888999998888888877666532 233444444444444433
No 114
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=89.89 E-value=2 Score=34.51 Aligned_cols=32 Identities=28% Similarity=0.256 Sum_probs=24.6
Q ss_pred CeEEEeeCCCc--hHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGN--TGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN--~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|. -|.++|..-...|.+++++..
T Consensus 32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r 65 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQ 65 (293)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcC
Confidence 47788888877 888888888888887666543
No 115
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=89.82 E-value=7.4 Score=31.99 Aligned_cols=57 Identities=25% Similarity=0.373 Sum_probs=41.4
Q ss_pred HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCC-cEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~-~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
.+...+++|.+.+|.+ +|..|.+.+..|+.+|. +++++.+ ++.+++.++.+|++.+.
T Consensus 164 l~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~vi 221 (356)
T 1pl8_A 164 CRRGGVTLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVTDL---SATRLSKAKEIGADLVL 221 (356)
T ss_dssp HHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTTCSEEE
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEEE
Confidence 3445577776666654 68899999999999999 5555433 56788888999997443
No 116
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=89.80 E-value=0.8 Score=37.21 Aligned_cols=58 Identities=19% Similarity=0.146 Sum_probs=44.1
Q ss_pred HHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 58 DAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 58 ~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
.+.+...+++|.+.+|... |..|.+.+..|+.+|.+++++. ++.+++.++.+|++.+.
T Consensus 133 ~al~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~ 190 (315)
T 3goh_A 133 QAFEKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS----ASLSQALAAKRGVRHLY 190 (315)
T ss_dssp HHHTTSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC----SSCCHHHHHHHTEEEEE
T ss_pred HHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE----ChhhHHHHHHcCCCEEE
Confidence 3446777888877666666 9999999999999999766664 34567778889987654
No 117
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=89.72 E-value=3.3 Score=32.70 Aligned_cols=54 Identities=22% Similarity=0.265 Sum_probs=34.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|--|.++|..-...|.++++....+. .....+.++..|.++..+.
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK 84 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEE
Confidence 46788888888999999888888988777655322 1222334445555555444
No 118
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=89.72 E-value=2.3 Score=33.66 Aligned_cols=33 Identities=27% Similarity=0.243 Sum_probs=27.3
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+|--|.++|..-...|.+++++-..
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 477888888999999999988889987776553
No 119
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=89.69 E-value=3.5 Score=32.01 Aligned_cols=32 Identities=31% Similarity=0.265 Sum_probs=26.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r 39 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAAR 39 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 47789999999999999888888888766644
No 120
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=89.62 E-value=2.8 Score=34.83 Aligned_cols=55 Identities=25% Similarity=0.261 Sum_probs=42.1
Q ss_pred CCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 65 ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 65 ~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
+++|++.+|...+|.-|.+.+..|+.+|.+++++. ...+++.++.+|++.+.-..
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~~~~ 235 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC----SQDASELVRKLGADDVIDYK 235 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEETT
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe----ChHHHHHHHHcCCCEEEECC
Confidence 77887777777689999999999999998766554 23577788999997655443
No 121
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=89.53 E-value=2.8 Score=33.31 Aligned_cols=54 Identities=22% Similarity=0.187 Sum_probs=33.6
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|--|.++|..-...|.+++++...... ....+.++..|.++..+.
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 79 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSS 79 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 477888888999999998888888887665443211 122233444455554443
No 122
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=89.51 E-value=3.4 Score=33.94 Aligned_cols=59 Identities=32% Similarity=0.317 Sum_probs=44.4
Q ss_pred HcCCCC------CCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 61 DKGLIT------PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 61 ~~g~~~------~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
+...++ +|.+.+|.+.+|..|.+.+..|+.+|.+++++.+ .+.+++.++.+|++.+...
T Consensus 138 ~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi~~ 202 (346)
T 3fbg_A 138 DVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTAS---RNETIEWTKKMGADIVLNH 202 (346)
T ss_dssp TTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC---SHHHHHHHHHHTCSEEECT
T ss_pred HhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCcEEEEC
Confidence 445565 6767677768899999999999999997666533 4678888888998765433
No 123
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=89.43 E-value=4.1 Score=33.73 Aligned_cols=59 Identities=20% Similarity=0.245 Sum_probs=42.9
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCc-EEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYN-LIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~-~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
+...+++|++.+|.+ +|.-|.+.+..|+.+|.+ ++++.+ ++.+++.++.+|++.+....
T Consensus 184 ~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~vi~~~ 243 (371)
T 1f8f_A 184 NALKVTPASSFVTWG-AGAVGLSALLAAKVCGASIIIAVDI---VESRLELAKQLGATHVINSK 243 (371)
T ss_dssp TTTCCCTTCEEEEES-CSHHHHHHHHHHHHHTCSEEEEEES---CHHHHHHHHHHTCSEEEETT
T ss_pred hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC---CHHHHHHHHHcCCCEEecCC
Confidence 456678886666654 688999999999999995 444432 46788888899997655443
No 124
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=89.34 E-value=2.9 Score=32.89 Aligned_cols=34 Identities=21% Similarity=0.251 Sum_probs=21.7
Q ss_pred CCeEEEeeCCCc--hHHHHHHHHHHcCCcEEEEEcC
Q 028372 68 GKTTLIEVTSGN--TGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 68 ~~~~vv~~ssGN--~g~alA~~a~~~g~~~~vvvp~ 101 (210)
|+..+||..+|+ -|.++|..-...|.++++.-..
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 457788876664 5666666666777776665443
No 125
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=89.21 E-value=3.6 Score=32.60 Aligned_cols=32 Identities=13% Similarity=0.267 Sum_probs=26.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 47789999999999999888888888776654
No 126
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=89.17 E-value=3.5 Score=33.47 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=25.6
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++-.
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r 59 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDI 59 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 46788888888888888888888988777643
No 127
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=89.17 E-value=3.4 Score=33.94 Aligned_cols=57 Identities=32% Similarity=0.401 Sum_probs=42.6
Q ss_pred HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCC-cEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~-~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
+.+...+ +|.+.+|... |..|.+++..++.+|. +++++.+ ++.+++.++.+|++.+.
T Consensus 160 ~l~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~~Ga~~~~ 217 (348)
T 2d8a_A 160 TVLAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEP---SDFRRELAKKVGADYVI 217 (348)
T ss_dssp HHTTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---CHHHHHHHHHHTCSEEE
T ss_pred HHHhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEEE
Confidence 3455566 7767666666 9999999999999999 7666544 36778888889987544
No 128
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=89.15 E-value=1.9 Score=33.75 Aligned_cols=32 Identities=28% Similarity=0.307 Sum_probs=25.3
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|--|.++|..-...|.+++++..
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 38 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGR 38 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 46788888888899998888888888766544
No 129
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=89.14 E-value=6.2 Score=30.19 Aligned_cols=54 Identities=19% Similarity=0.316 Sum_probs=35.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCH--HHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSM--ERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~--~~~~~~~~~Ga~v~~v~ 122 (210)
++.+|+..+|.-|.++|..-...|.+++++...+... ...+.++..|.++..+.
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 61 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEE
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEE
Confidence 4778899999999999998888898877764333221 22334444566555544
No 130
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=89.11 E-value=2.7 Score=32.41 Aligned_cols=32 Identities=19% Similarity=0.257 Sum_probs=25.5
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++.+|+..+|.-|.++|..-...|.+++++..
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r 43 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDI 43 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcC
Confidence 46788888899999999887777887766654
No 131
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=88.92 E-value=7 Score=30.53 Aligned_cols=54 Identities=22% Similarity=0.218 Sum_probs=35.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|--|.++|..-...|.++++....+.. ....+.++..|.++..+.
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~ 82 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLS 82 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEE
Confidence 367888888889999999888889888776654321 222334444455554443
No 132
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=88.82 E-value=3 Score=33.24 Aligned_cols=32 Identities=22% Similarity=0.173 Sum_probs=25.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++-.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r 60 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGR 60 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 37788888898999999888777887766543
No 133
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=88.75 E-value=2.1 Score=34.17 Aligned_cols=54 Identities=22% Similarity=0.319 Sum_probs=34.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|--|.++|..-...|.+++++...+.. ....+.++..|.++..+.
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLR 85 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 467888888989999998888888887776532211 122233444455554443
No 134
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=88.72 E-value=4.8 Score=33.74 Aligned_cols=57 Identities=26% Similarity=0.200 Sum_probs=42.1
Q ss_pred HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCC-cEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRALGAEII 119 (210)
Q Consensus 59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~-~~~vvvp~~~~~~~~~~~~~~Ga~v~ 119 (210)
+.+...+++|.+.+|.. +|.-|...+..|+.+|. +++++.+ ++.+++.++.+|++++
T Consensus 177 al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~i 234 (398)
T 2dph_A 177 GCVSAGVKPGSHVYIAG-AGPVGRCAAAGARLLGAACVIVGDQ---NPERLKLLSDAGFETI 234 (398)
T ss_dssp HHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEES---CHHHHHHHHTTTCEEE
T ss_pred HHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHcCCcEE
Confidence 33556678886656654 69899999999999998 5555443 4677888899999743
No 135
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=88.66 E-value=3.8 Score=32.07 Aligned_cols=32 Identities=25% Similarity=0.355 Sum_probs=25.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDM 39 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 47788989999999999888888887766544
No 136
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=88.58 E-value=2.1 Score=36.09 Aligned_cols=56 Identities=27% Similarity=0.358 Sum_probs=41.5
Q ss_pred CCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 64 LITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 64 ~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
.+++|.+.+|.+ +|..|.+.+..|+.+|...++.+. .++.+++.++.+|++.+.-.
T Consensus 210 ~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi~~ 265 (404)
T 3ip1_A 210 GIRPGDNVVILG-GGPIGLAAVAILKHAGASKVILSE--PSEVRRNLAKELGADHVIDP 265 (404)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEC--SCHHHHHHHHHHTCSEEECT
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHcCCCEEEcC
Confidence 677886666654 599999999999999994444433 35688888899999765544
No 137
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=88.56 E-value=4.3 Score=31.48 Aligned_cols=54 Identities=19% Similarity=0.180 Sum_probs=34.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~ 122 (210)
++.+|+..+|.-|.++|..-...|.+++++...+.. ....+.++..|.++..+.
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~ 63 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEE
Confidence 477888888999999999888889887776552211 111233444565555444
No 138
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=88.49 E-value=4.7 Score=31.75 Aligned_cols=32 Identities=19% Similarity=0.121 Sum_probs=26.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 53 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSR 53 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeC
Confidence 47788999999999999988888888766644
No 139
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=88.43 E-value=3.3 Score=33.29 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=27.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+|.-|.++|..-...|.+++++-..
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 29 KVAFITGAARGQGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecc
Confidence 477888888989999999888889988776543
No 140
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=88.35 E-value=6.8 Score=30.51 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=25.3
Q ss_pred CeEEEeeCCCc--hHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGN--TGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN--~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+|. -|.++|..-...|.+++++...
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 46788888877 8888888888888887766544
No 141
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=88.34 E-value=4.5 Score=31.45 Aligned_cols=32 Identities=19% Similarity=0.273 Sum_probs=25.6
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 34 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADY 34 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 46788888999999999888888887766644
No 142
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=88.33 E-value=3.1 Score=32.84 Aligned_cols=33 Identities=30% Similarity=0.319 Sum_probs=27.1
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++..+|+..+|--|.++|..-...|.+++++-.
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 45 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDL 45 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEec
Confidence 347788999999999999988888998777654
No 143
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=88.32 E-value=3.9 Score=31.64 Aligned_cols=32 Identities=25% Similarity=0.345 Sum_probs=25.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 46788888899999999888888888777654
No 144
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=88.30 E-value=5 Score=28.03 Aligned_cols=50 Identities=30% Similarity=0.370 Sum_probs=37.8
Q ss_pred EEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
.++..+.|..|.++|......|.+++++-. .+.+.+.++..|.+++..+.
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~---~~~~~~~~~~~~~~~~~gd~ 57 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDK---SKEKIELLEDEGFDAVIADP 57 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEECCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEC---CHHHHHHHHHCCCcEEECCC
Confidence 355566799999999999999999888754 45666677777877766554
No 145
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=88.24 E-value=4.7 Score=32.89 Aligned_cols=57 Identities=19% Similarity=0.219 Sum_probs=43.4
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHH-HcCCEEEE
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLR-ALGAEIIL 120 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~-~~Ga~v~~ 120 (210)
+...+++|++.+|...+|..|.+++..++..|.+++++.. ++.+++.++ .+|++.+.
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~~g~~~~~ 206 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAG---SKEKVDLLKTKFGFDDAF 206 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTSCCSEEE
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCceEE
Confidence 4556778877777777899999999999999997666543 456777777 68986543
No 146
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.22 E-value=3.3 Score=32.77 Aligned_cols=32 Identities=22% Similarity=0.223 Sum_probs=26.7
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|--|.++|..-...|.+++++-.
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence 47788888999999999988888998877654
No 147
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=88.15 E-value=2 Score=34.51 Aligned_cols=55 Identities=25% Similarity=0.373 Sum_probs=41.4
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~ 119 (210)
+.+ +++|++.+|...+|..|.+++..++.+|.+++++.+ ++.+++.++.+|++.+
T Consensus 120 ~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~ 174 (302)
T 1iz0_A 120 RAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS---RPEKLALPLALGAEEA 174 (302)
T ss_dssp HTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SGGGSHHHHHTTCSEE
T ss_pred Hhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCCEE
Confidence 356 788877777777799999999999999997766654 2445556677888644
No 148
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=88.12 E-value=4.6 Score=33.17 Aligned_cols=56 Identities=25% Similarity=0.277 Sum_probs=41.2
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
+...+++|++.+|.+ +|..|.+.+..|+.+|.+++++. .++.+++.++.+|++.+.
T Consensus 162 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~~ 217 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTA---RSPRRLEVAKNCGADVTL 217 (352)
T ss_dssp HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHTTCSEEE
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEc---CCHHHHHHHHHhCCCEEE
Confidence 444577786766655 58899999999999999844432 257788888999997544
No 149
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=88.09 E-value=1.8 Score=35.58 Aligned_cols=57 Identities=14% Similarity=0.114 Sum_probs=41.0
Q ss_pred HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
.++..+++|.+.+|. .+|..|.+.+..|+.+|.+++++.. ++.+++.++.+|++.+.
T Consensus 169 l~~~~~~~g~~VlV~-GaG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~v~ 225 (348)
T 3two_A 169 LKFSKVTKGTKVGVA-GFGGLGSMAVKYAVAMGAEVSVFAR---NEHKKQDALSMGVKHFY 225 (348)
T ss_dssp HHHTTCCTTCEEEEE-SCSHHHHHHHHHHHHTTCEEEEECS---SSTTHHHHHHTTCSEEE
T ss_pred HHhcCCCCCCEEEEE-CCcHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHhcCCCeec
Confidence 334467788666665 4699999999999999997666543 34566777889987554
No 150
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=88.07 E-value=4.5 Score=33.07 Aligned_cols=52 Identities=27% Similarity=0.286 Sum_probs=38.9
Q ss_pred CCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372 64 LITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (210)
Q Consensus 64 ~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~ 119 (210)
.+++|.+.+|... |..|.+++..++.+|.+++++.. ++.+++.++.+|++.+
T Consensus 161 ~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~ 212 (339)
T 1rjw_A 161 GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDI---GDEKLELAKELGADLV 212 (339)
T ss_dssp TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHTTCSEE
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHCCCCEE
Confidence 4667766666665 67999999999999987655433 4677778888999754
No 151
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=88.07 E-value=3.6 Score=34.26 Aligned_cols=57 Identities=18% Similarity=0.230 Sum_probs=41.4
Q ss_pred HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCC-cEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~-~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
.+...+++|.+.+|.. .|..|.+.+..|+.+|. +++++ . .++.+++.++.+|++.+.
T Consensus 186 ~~~~~~~~g~~VlV~G-aG~vG~~a~q~a~~~Ga~~Vi~~-~--~~~~~~~~a~~lGa~~vi 243 (378)
T 3uko_A 186 WNTAKVEPGSNVAIFG-LGTVGLAVAEGAKTAGASRIIGI-D--IDSKKYETAKKFGVNEFV 243 (378)
T ss_dssp HTTTCCCTTCCEEEEC-CSHHHHHHHHHHHHHTCSCEEEE-C--SCTTHHHHHHTTTCCEEE
T ss_pred HhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEE-c--CCHHHHHHHHHcCCcEEE
Confidence 3556778886766654 58999999999999999 45554 3 234577788899997644
No 152
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=88.07 E-value=8.5 Score=30.54 Aligned_cols=30 Identities=20% Similarity=0.367 Sum_probs=22.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIV 98 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vv 98 (210)
+..+||..+|--|.++|..-...|.+++++
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~ 38 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVT 38 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence 467888888888888888877778775554
No 153
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=88.05 E-value=7.1 Score=30.36 Aligned_cols=72 Identities=14% Similarity=0.039 Sum_probs=48.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECCCC-CHHHHHHHHHHHHHh
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADSAL-RFEEILEKGEEILKK 140 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~~~-~~~~~~~~a~~~~~~ 140 (210)
+..+|+..+|.-|.++|..-...|.+++++-.... .....+.++..|.++..+..+- +.++..+..++..++
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 47788999999999999998899999887765432 2344556677788887766432 234444445555444
No 154
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=88.05 E-value=8.1 Score=30.16 Aligned_cols=54 Identities=24% Similarity=0.405 Sum_probs=34.6
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|--|.++|..-...|.++++....+.. ....+.++..|.++..+.
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 60 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVK 60 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 477888888888999998888888887775443321 122333444555555444
No 155
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=87.98 E-value=2.3 Score=33.83 Aligned_cols=31 Identities=19% Similarity=0.201 Sum_probs=25.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv 99 (210)
+..+|+..+|.-|.++|..-...|.+++++.
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~ 75 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICIS 75 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEc
Confidence 4678898999999999988877888877743
No 156
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=87.95 E-value=7.6 Score=29.76 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=23.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYAAHGASVVLLGR 46 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEec
Confidence 46788888888888888887777777655543
No 157
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=87.87 E-value=8.5 Score=30.23 Aligned_cols=34 Identities=18% Similarity=0.287 Sum_probs=27.3
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST 102 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~ 102 (210)
+..+|+..+|.-|.++|..-...|.+++++-...
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 45 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPE 45 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4778899999999999998888898877765443
No 158
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=87.83 E-value=3 Score=33.06 Aligned_cols=56 Identities=13% Similarity=0.039 Sum_probs=41.5
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~ 124 (210)
+..+|+..+|--|.++|..-...|.+++++-.........+.++..|.++..+..+
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D 87 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVAD 87 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEec
Confidence 47788999999999999998899999887764332334455666778888776543
No 159
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=87.71 E-value=3.6 Score=32.61 Aligned_cols=33 Identities=24% Similarity=0.286 Sum_probs=27.2
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++..+||..+|.-|.++|..-...|.+++++-.
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEec
Confidence 347788999999999999998888998877644
No 160
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=87.69 E-value=4.5 Score=31.47 Aligned_cols=32 Identities=19% Similarity=0.085 Sum_probs=25.5
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++.+|+..+|.-|.++|..-...|.+++++..
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r 46 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCAR 46 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 46788888899999999888878887776654
No 161
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=87.69 E-value=6.3 Score=30.98 Aligned_cols=32 Identities=19% Similarity=0.301 Sum_probs=26.4
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|......|.+++++..
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r 64 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCAR 64 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEC
Confidence 47789999999999999988888888777654
No 162
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=87.57 E-value=6.7 Score=30.74 Aligned_cols=54 Identities=20% Similarity=0.175 Sum_probs=35.6
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHH-HHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMER-RIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~-~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|.-|.++|..-...|.+++++........+ .+.++..|.++..+.
T Consensus 35 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 89 (279)
T 3ctm_A 35 KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYK 89 (279)
T ss_dssp CEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEE
Confidence 477888899999999999888889888777654433222 233344455554443
No 163
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=87.55 E-value=4.8 Score=32.86 Aligned_cols=64 Identities=17% Similarity=0.200 Sum_probs=40.1
Q ss_pred HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHc-CCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCH
Q 028372 60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAAR-GYNLIIVMPSTCSMERRIVLRALGAEIILADSALRF 127 (210)
Q Consensus 60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~-g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~ 127 (210)
.+...+++|.+.+|. .+|..|...+..++.+ |.+++++.+ ++.|++..+.+|++.+.-..+.++
T Consensus 156 l~~~~~~~g~~VlV~-GaG~~g~~a~~~a~~~~g~~Vi~~~~---~~~r~~~~~~~Ga~~~i~~~~~~~ 220 (348)
T 4eez_A 156 IKVSGVKPGDWQVIF-GAGGLGNLAIQYAKNVFGAKVIAVDI---NQDKLNLAKKIGADVTINSGDVNP 220 (348)
T ss_dssp HHHHTCCTTCEEEEE-CCSHHHHHHHHHHHHTSCCEEEEEES---CHHHHHHHHHTTCSEEEEC-CCCH
T ss_pred ecccCCCCCCEEEEE-cCCCccHHHHHHHHHhCCCEEEEEEC---cHHHhhhhhhcCCeEEEeCCCCCH
Confidence 344456777665554 5566665555566554 777666543 567888999999987765544333
No 164
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=87.51 E-value=4.2 Score=32.58 Aligned_cols=32 Identities=22% Similarity=0.184 Sum_probs=26.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 35 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r 66 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAKAGATIVFNDI 66 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 47789999999999999888888888776644
No 165
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=87.48 E-value=4.8 Score=31.70 Aligned_cols=32 Identities=22% Similarity=0.324 Sum_probs=26.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 47788999999999999888888888776654
No 166
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=87.46 E-value=8.5 Score=29.75 Aligned_cols=34 Identities=12% Similarity=0.124 Sum_probs=27.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST 102 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~ 102 (210)
+..+|+..+|.-|.++|..-...|.+++++....
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~ 46 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPN 46 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4778899999999999998888898877765543
No 167
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=87.42 E-value=9.7 Score=30.37 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=24.5
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv 99 (210)
+..+|+..+|--|.++|..-...|.+++++.
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~ 80 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGADVAINY 80 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 4778888888899999888777787766543
No 168
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.39 E-value=4.2 Score=31.91 Aligned_cols=32 Identities=19% Similarity=0.304 Sum_probs=24.7
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|--|.++|..-...|.+++++-.
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 42 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGR 42 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 46788888888888888887777887666543
No 169
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=87.39 E-value=4.9 Score=32.28 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=26.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+|--|.++|..-...|.+++++...
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARS 74 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 467888888888889988888888887776544
No 170
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=87.34 E-value=8.5 Score=29.66 Aligned_cols=54 Identities=20% Similarity=0.278 Sum_probs=35.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~ 122 (210)
+..+|+..+|--|.++|..-...|.++++....+.. ....+.++..|.++..+.
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQ 60 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 467888888889999998888889888776543321 122334445555555444
No 171
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=87.24 E-value=1.8 Score=35.25 Aligned_cols=57 Identities=26% Similarity=0.376 Sum_probs=41.2
Q ss_pred HcCCCCCCC-eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 61 DKGLITPGK-TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 61 ~~g~~~~~~-~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
++..++++. +.+|...+|..|.+++..|+.+|.+++++.+. +.+++.++.+|++.+.
T Consensus 142 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~---~~~~~~~~~lGa~~~i 199 (328)
T 1xa0_A 142 EEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGK---AAEHDYLRVLGAKEVL 199 (328)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---TTCHHHHHHTTCSEEE
T ss_pred hhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHcCCcEEE
Confidence 344566764 65666667999999999999999987776654 3456667789986543
No 172
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=87.21 E-value=5.3 Score=31.10 Aligned_cols=32 Identities=19% Similarity=0.348 Sum_probs=25.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 46 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSR 46 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 47788888999999999888888887776654
No 173
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=87.15 E-value=6.3 Score=31.12 Aligned_cols=32 Identities=28% Similarity=0.301 Sum_probs=25.6
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|--|.++|..-...|.+++++-.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 43 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGR 43 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 47788888899999999888888888766543
No 174
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=87.14 E-value=2.1 Score=35.36 Aligned_cols=50 Identities=16% Similarity=0.250 Sum_probs=37.4
Q ss_pred CeEEEeeCCCchHHHH-HHHH-HHcCCc-EEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372 69 KTTLIEVTSGNTGVGL-AFIA-AARGYN-LIIVMPSTCSMERRIVLRALGAEII 119 (210)
Q Consensus 69 ~~~vv~~ssGN~g~al-A~~a-~~~g~~-~~vvvp~~~~~~~~~~~~~~Ga~v~ 119 (210)
.+.+|... |..|... +..| +.+|.+ ++++.+......+++.++.+|++.+
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v 226 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV 226 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc
Confidence 56666655 9899988 8889 999998 6666554433347778889999876
No 175
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=87.12 E-value=8.8 Score=29.59 Aligned_cols=32 Identities=22% Similarity=0.163 Sum_probs=26.6
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r 37 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDI 37 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 47789999999999999988888988777654
No 176
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=87.01 E-value=4.3 Score=31.99 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=27.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+||..+|--|.++|..-...|.+++++-..
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 477888899999999999888889887776543
No 177
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=86.91 E-value=6.8 Score=29.88 Aligned_cols=32 Identities=13% Similarity=0.253 Sum_probs=25.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|--|.++|..-...|.++++...
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~ 33 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYA 33 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 36788888899999999988888988777543
No 178
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=86.85 E-value=5.9 Score=30.86 Aligned_cols=31 Identities=23% Similarity=0.435 Sum_probs=24.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv 99 (210)
+..+|+..+|--|.++|..-...|.+++++.
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 35 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNG 35 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEe
Confidence 4678888888899999888777787766553
No 179
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=86.81 E-value=8.8 Score=29.75 Aligned_cols=33 Identities=12% Similarity=0.176 Sum_probs=27.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+|--|.++|..-...|.+++++...
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~ 40 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLK 40 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 477888999999999999988889987776544
No 180
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=86.73 E-value=1.8 Score=35.33 Aligned_cols=56 Identities=23% Similarity=0.378 Sum_probs=40.2
Q ss_pred HcCCCCCCC-eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372 61 DKGLITPGK-TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (210)
Q Consensus 61 ~~g~~~~~~-~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~ 119 (210)
++..++++. +.+|...+|..|.+++..|+.+|.+++++.+. +.+++.++.+|++.+
T Consensus 143 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~---~~~~~~~~~lGa~~v 199 (330)
T 1tt7_A 143 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGN---REAADYLKQLGASEV 199 (330)
T ss_dssp HHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESS---SSTHHHHHHHTCSEE
T ss_pred HhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHcCCcEE
Confidence 344566764 66666667999999999999999997776654 335566677888644
No 181
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=86.70 E-value=8 Score=29.93 Aligned_cols=31 Identities=32% Similarity=0.422 Sum_probs=24.5
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIV 98 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vv 98 (210)
++..+|+..+|--|.++|..-...|.+++++
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~ 36 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADGATVIVS 36 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence 3477888888889999998888888776654
No 182
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=86.62 E-value=10 Score=29.85 Aligned_cols=55 Identities=16% Similarity=0.186 Sum_probs=35.2
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD 122 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~ 122 (210)
++..+|+..+|--|.++|..-...|.+++++...... ....+.++..|.++..+.
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 87 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIR 87 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 3477888888999999998888888887766443211 122333444555555444
No 183
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=86.57 E-value=5.5 Score=30.66 Aligned_cols=32 Identities=13% Similarity=0.165 Sum_probs=25.4
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|--|.++|..-...|.+++++-.
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGR 35 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 36788888899999999888888888666544
No 184
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=86.48 E-value=10 Score=29.69 Aligned_cols=55 Identities=16% Similarity=0.267 Sum_probs=37.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~~ 123 (210)
+..+|+..+|.-|.++|..-...|.++++....... ....+.++..|.++..+..
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEc
Confidence 477888888889999998888889888776544321 2223445556666665543
No 185
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=86.32 E-value=4.9 Score=31.35 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=25.3
Q ss_pred CeEEEeeCC--CchHHHHHHHHHHcCCcEEEEEcCC
Q 028372 69 KTTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPST 102 (210)
Q Consensus 69 ~~~vv~~ss--GN~g~alA~~a~~~g~~~~vvvp~~ 102 (210)
+..+|+..+ +.-|.++|..-...|.+++++....
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~ 56 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASR 56 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSS
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCc
Confidence 467777777 6788888888888888877765544
No 186
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=86.27 E-value=6.7 Score=31.17 Aligned_cols=32 Identities=13% Similarity=0.171 Sum_probs=25.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++.+|+..+|.-|.++|..-...|.+++++..
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r 50 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASR 50 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 47788999999999999888888887666644
No 187
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=86.26 E-value=4.8 Score=33.35 Aligned_cols=57 Identities=25% Similarity=0.223 Sum_probs=40.7
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
+...+++|.+.+|.. +|.-|.+.+..|+.+|...++.+. .++.+++.++.+|++.+.
T Consensus 185 ~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi 241 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVG--THKDKFPKAIELGATECL 241 (373)
T ss_dssp TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEC--SCGGGHHHHHHTTCSEEE
T ss_pred hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEC--CCHHHHHHHHHcCCcEEE
Confidence 456678886666654 699999999999999984333333 245677788899996543
No 188
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=86.21 E-value=3.2 Score=34.32 Aligned_cols=58 Identities=22% Similarity=0.204 Sum_probs=40.4
Q ss_pred HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
+..+..+++|.+.+|... |..|..++..|+.+|.+++++.+. +.+++.++.+|++.+.
T Consensus 171 ~l~~~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~---~~~~~~~~~lGa~~v~ 228 (360)
T 1piw_A 171 PLVRNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRS---SRKREDAMKMGADHYI 228 (360)
T ss_dssp HHHHTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESS---STTHHHHHHHTCSEEE
T ss_pred HHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHcCCCEEE
Confidence 333456778866666655 999999999999999986665543 3355666778886544
No 189
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=86.19 E-value=6 Score=31.68 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=23.9
Q ss_pred CeEEEeeCCC--chHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSG--NTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssG--N~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+| .-|.++|..-...|.+++++...
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 3667887776 77888888877778886665543
No 190
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=86.18 E-value=4.5 Score=34.88 Aligned_cols=55 Identities=16% Similarity=0.263 Sum_probs=32.5
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
++..+||..+|--|.++|..-...|.+++++-.........+..+..+.+++.++
T Consensus 213 gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~D 267 (454)
T 3u0b_A 213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLD 267 (454)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECC
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEe
Confidence 3467888888888888888877778876655332222222233334455544444
No 191
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=86.16 E-value=5.9 Score=30.75 Aligned_cols=32 Identities=31% Similarity=0.325 Sum_probs=25.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++-.
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r 41 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDR 41 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 47788888899999999988888888766643
No 192
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=86.10 E-value=9.3 Score=30.10 Aligned_cols=32 Identities=22% Similarity=0.260 Sum_probs=24.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++-.
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r 59 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASR 59 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 47788888888888888887777887666543
No 193
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=86.09 E-value=4.9 Score=30.65 Aligned_cols=32 Identities=28% Similarity=0.311 Sum_probs=25.5
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 3 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 46788888898999999888888888666544
No 194
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=86.07 E-value=7.6 Score=30.68 Aligned_cols=88 Identities=11% Similarity=0.171 Sum_probs=46.4
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCC-CeEE-
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTP-DGYL- 146 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~-~~~~- 146 (210)
+..+|+..+|--|.++|..-...|.+++++.... +...+..+++.+..+ ...+
T Consensus 13 k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~-------------------------~~~~~~~~~l~~~~~~~~~~~ 67 (311)
T 3o26_A 13 RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDV-------------------------TKGHEAVEKLKNSNHENVVFH 67 (311)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH-------------------------HHHHHHHHHHHTTTCCSEEEE
T ss_pred cEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCH-------------------------HHHHHHHHHHHhcCCCceEEE
Confidence 3667777777777777777666666555443321 112222233322221 1222
Q ss_pred cCCCCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCch
Q 028372 147 LRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTG 185 (210)
Q Consensus 147 ~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~G 185 (210)
.-...++ ......+..++.+++ +++|.+|..+|..
T Consensus 68 ~~Dl~~~---~~~v~~~~~~~~~~~-g~iD~lv~nAg~~ 102 (311)
T 3o26_A 68 QLDVTDP---IATMSSLADFIKTHF-GKLDILVNNAGVA 102 (311)
T ss_dssp ECCTTSC---HHHHHHHHHHHHHHH-SSCCEEEECCCCC
T ss_pred EccCCCc---HHHHHHHHHHHHHhC-CCCCEEEECCccc
Confidence 1222233 122244555666666 5799999999975
No 195
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=86.04 E-value=4.7 Score=31.36 Aligned_cols=73 Identities=16% Similarity=0.105 Sum_probs=46.5
Q ss_pred CCeEEEeeCC--CchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHH-HcC-CEEEEECCCCCHHHHHHHHHHHHHhC
Q 028372 68 GKTTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLR-ALG-AEIILADSALRFEEILEKGEEILKKT 141 (210)
Q Consensus 68 ~~~~vv~~ss--GN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~-~~G-a~v~~v~~~~~~~~~~~~a~~~~~~~ 141 (210)
+++.+|+..+ |.-|.++|..-...|.+++++..........+.+. .+| ..++.++-. +.++..+..++..++.
T Consensus 14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVA-DDAQIDALFASLKTHW 90 (271)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCC-CHHHHHHHHHHHHHHc
Confidence 4577888866 88999999998899999888776644445555553 333 233444432 3455555556665554
No 196
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=86.03 E-value=6.5 Score=30.95 Aligned_cols=31 Identities=19% Similarity=0.203 Sum_probs=24.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv 99 (210)
+..+|+..+|--|.++|..-...|.+++++-
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~ 58 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHG 58 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 4778888888889999888888888776654
No 197
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=85.96 E-value=6.5 Score=30.73 Aligned_cols=32 Identities=28% Similarity=0.239 Sum_probs=25.5
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 45 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDV 45 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 47788888999999999887777887766544
No 198
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=85.93 E-value=5.9 Score=31.18 Aligned_cols=33 Identities=27% Similarity=0.189 Sum_probs=26.7
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+|.-|.++|..-...|.+++++...
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 467888888999999998888889887776554
No 199
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=85.85 E-value=10 Score=29.81 Aligned_cols=32 Identities=22% Similarity=0.252 Sum_probs=24.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|--|.++|..-...|.+++++..
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r 60 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTAT 60 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 46788888888888888887777877666544
No 200
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=85.73 E-value=6.3 Score=31.29 Aligned_cols=32 Identities=19% Similarity=0.278 Sum_probs=26.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++.+|+..+|.-|.++|..-...|.+++++..
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r 58 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASR 58 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 46788999999999999888888888766644
No 201
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=85.71 E-value=3.5 Score=34.12 Aligned_cols=51 Identities=14% Similarity=0.172 Sum_probs=38.8
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~ 119 (210)
|++.+|... |..|.+++..++.+|.+++++.+......+++.++.+|++.+
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v 231 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY 231 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee
Confidence 767666666 999999999999999977766554323366778888999876
No 202
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=85.70 E-value=2.3 Score=34.49 Aligned_cols=54 Identities=26% Similarity=0.327 Sum_probs=40.3
Q ss_pred CCCCCC-eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 64 LITPGK-TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 64 ~~~~~~-~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
.++++. +.+|...+|..|.+.+..|+.+|.+++++.+ ++.+++.++.+|++-+.
T Consensus 142 ~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi 196 (324)
T 3nx4_A 142 GIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSG---RESTHGYLKSLGANRIL 196 (324)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEES---CGGGHHHHHHHTCSEEE
T ss_pred ccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCCEEE
Confidence 345532 4556666699999999999999998877765 35678888889987554
No 203
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=85.62 E-value=5.8 Score=32.88 Aligned_cols=57 Identities=26% Similarity=0.271 Sum_probs=40.7
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
+...+++|.+.+|.. +|..|.+.+..|+.+|.+.++.+. .++.+++.++.+|++.+.
T Consensus 189 ~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi 245 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAID--INGEKFPKAKALGATDCL 245 (376)
T ss_dssp TTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCSEEE
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHhCCcEEE
Confidence 456678886666655 699999999999999984333332 245677788889996543
No 204
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=85.57 E-value=6.8 Score=30.72 Aligned_cols=32 Identities=13% Similarity=0.270 Sum_probs=25.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|--|.++|..-...|.+++++..
T Consensus 12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 36788888888899988887777887766654
No 205
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=85.53 E-value=6.4 Score=30.64 Aligned_cols=32 Identities=22% Similarity=0.191 Sum_probs=25.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|--|.++|..-...|.+++++-.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 40 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADI 40 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 47788888999999999888888888766543
No 206
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=85.47 E-value=4.6 Score=31.03 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=26.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++.+|+..+|.-|.++|..-...|.+++++..
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r 34 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARGDRVAALDL 34 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 46788999999999999988888888776654
No 207
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=85.23 E-value=4.5 Score=33.21 Aligned_cols=63 Identities=24% Similarity=0.129 Sum_probs=43.7
Q ss_pred HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHH----HcCCEEEEEC
Q 028372 60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD 122 (210)
Q Consensus 60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~v~ 122 (210)
++.|.+.+|.+..+..=.+|.+.+++.++..+|.+++++.|+.- ++.-++.++ ..|+.+..+.
T Consensus 138 e~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 206 (307)
T 3tpf_A 138 EWNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGY 206 (307)
T ss_dssp HTTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HHhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 34565553545555555689999999999999999999999864 333333333 5677777665
No 208
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=85.15 E-value=6.4 Score=32.60 Aligned_cols=57 Identities=19% Similarity=0.209 Sum_probs=40.6
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
+...+++|.+.+|.. +|..|.+++..|+.+|.+.++.+. .++.+++.++.+|++.+.
T Consensus 185 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi 241 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVD--INKDKFAKAKEVGATECV 241 (374)
T ss_dssp TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCSEEE
T ss_pred hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHhCCceEe
Confidence 456678886766655 699999999999999984333332 245677778889986443
No 209
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=85.08 E-value=7.8 Score=33.06 Aligned_cols=101 Identities=16% Similarity=0.021 Sum_probs=63.6
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHcCCC-CCCCeEEEeeCCCchHHHHHHHHHH-cCCcEEEEEcCCCCH-----------
Q 028372 39 ETMEPCSSVKDRIAYSMIKDAEDKGLI-TPGKTTLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPSTCSM----------- 105 (210)
Q Consensus 39 E~~~ptGS~K~R~a~~~~~~a~~~g~~-~~~~~~vv~~ssGN~g~alA~~a~~-~g~~~~vvvp~~~~~----------- 105 (210)
-+.+|.|.-+. ....+...+.++.+ ..++..+|+.+++..|.|+|..-.. .|.+++++-......
T Consensus 19 ~~~hp~gc~~~--v~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn 96 (405)
T 3zu3_A 19 VTAHPTGCEAN--VKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYN 96 (405)
T ss_dssp CCCCHHHHHHH--HHHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHH
T ss_pred cCCCCHHHHHH--HHHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchh
Confidence 34577776443 55666777777766 3345678888888899999988888 999988765433221
Q ss_pred --HHHHHHHHcCCEEEEECCCC-CHHHHHHHHHHHHHhC
Q 028372 106 --ERRIVLRALGAEIILADSAL-RFEEILEKGEEILKKT 141 (210)
Q Consensus 106 --~~~~~~~~~Ga~v~~v~~~~-~~~~~~~~a~~~~~~~ 141 (210)
...+.++..|.++..+..+- +.++..+...+..++.
T Consensus 97 ~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~ 135 (405)
T 3zu3_A 97 SAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDL 135 (405)
T ss_dssp HHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 12335677788777665432 2344444555555554
No 210
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=85.06 E-value=6.8 Score=32.41 Aligned_cols=57 Identities=18% Similarity=0.249 Sum_probs=40.7
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
+...+++|.+.+|.. +|..|.+.+..|+.+|.+.++.+. .++.+++.++.+|++.+.
T Consensus 186 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi 242 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVD--LNPDKFEKAKVFGATDFV 242 (374)
T ss_dssp TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCCEEE
T ss_pred hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEc--CCHHHHHHHHHhCCceEE
Confidence 456677886666655 699999999999999994333332 245677788889996543
No 211
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=85.04 E-value=9.3 Score=29.63 Aligned_cols=33 Identities=27% Similarity=0.282 Sum_probs=26.3
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++..+|+..+|--|.++|..-...|.+++++..
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 37 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADV 37 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 347788999999999999888888888766644
No 212
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=85.04 E-value=6.6 Score=30.43 Aligned_cols=33 Identities=30% Similarity=0.375 Sum_probs=25.2
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++..+|+..+|--|.++|..-...|.+++++-.
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r 41 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTAT 41 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 347788888888888888888888887766543
No 213
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=85.03 E-value=7.7 Score=29.61 Aligned_cols=25 Identities=20% Similarity=0.138 Sum_probs=20.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGY 93 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~ 93 (210)
+..+|+..+|.-|.++|..-...|.
T Consensus 3 k~vlITGasggiG~~la~~l~~~G~ 27 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARAAR 27 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHHhcC
Confidence 3678888889999999988777787
No 214
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=85.02 E-value=7 Score=31.00 Aligned_cols=31 Identities=16% Similarity=0.263 Sum_probs=24.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv 99 (210)
+..+|+..+|--|.++|..-...|.+++++-
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~ 60 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCAD 60 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 4778888888899999988888888776654
No 215
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=84.96 E-value=13 Score=30.12 Aligned_cols=33 Identities=27% Similarity=0.139 Sum_probs=27.6
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+||..+|--|.++|..-...|.++++.+..
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~ 38 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRD 38 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCc
Confidence 367888888999999999988899988877654
No 216
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=84.88 E-value=5.1 Score=32.15 Aligned_cols=32 Identities=22% Similarity=0.225 Sum_probs=24.6
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv 99 (210)
|+..+||.+++--|.++|..-...|.++++.-
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~ 60 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITG 60 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEE
Confidence 34778888888889988888777777765543
No 217
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=84.78 E-value=12 Score=29.11 Aligned_cols=33 Identities=9% Similarity=0.106 Sum_probs=25.2
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++..+|+..+|--|.++|..-...|.+++++-.
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 347788888888899988887777887666543
No 218
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=84.47 E-value=13 Score=29.05 Aligned_cols=31 Identities=10% Similarity=0.203 Sum_probs=24.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv 99 (210)
+..+|+..+|.-|.++|..-...|.+++++.
T Consensus 26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~ 56 (269)
T 3gk3_A 26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSH 56 (269)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 3667888888888888888877888776654
No 219
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=84.47 E-value=8.9 Score=30.32 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=25.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+|--|.++|..-...|.+++++...
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~ 56 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHN 56 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 467888888888888888877778876666543
No 220
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=84.45 E-value=5.8 Score=30.67 Aligned_cols=74 Identities=8% Similarity=0.126 Sum_probs=48.9
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC-C-CHHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHhC
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST-C-SMERRIVLRALGAEIILADSA-LRFEEILEKGEEILKKT 141 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~-~-~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 141 (210)
+++.+|+..+|--|.++|..-...|.++++....+ . .....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence 34678888888899999999888899988776332 2 234456667778777665543 23445555556665554
No 221
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=84.40 E-value=9.7 Score=31.02 Aligned_cols=55 Identities=25% Similarity=0.277 Sum_probs=40.6
Q ss_pred CCCCCCeEEEeeCCCchHHHHHHHHHHc-CCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 64 LITPGKTTLIEVTSGNTGVGLAFIAAAR-GYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 64 ~~~~~~~~vv~~ssGN~g~alA~~a~~~-g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
.+++|.+.+|.. +|..|.+.+..|+.+ |.+++++.. ++.+++.++.+|++.+...
T Consensus 168 ~~~~g~~vlv~G-aG~vG~~a~qla~~~g~~~Vi~~~~---~~~~~~~~~~lGa~~~i~~ 223 (345)
T 3jv7_A 168 LLGPGSTAVVIG-VGGLGHVGIQILRAVSAARVIAVDL---DDDRLALAREVGADAAVKS 223 (345)
T ss_dssp GCCTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEES---CHHHHHHHHHTTCSEEEEC
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHcCCCEEEcC
Confidence 567776655554 599999999999998 666655533 5788889999999766544
No 222
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=84.40 E-value=5.1 Score=31.19 Aligned_cols=25 Identities=16% Similarity=0.102 Sum_probs=18.5
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGY 93 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~ 93 (210)
+..+|+..+|--|.++|..-...|.
T Consensus 3 k~~lVTGas~GIG~aia~~l~~~g~ 27 (254)
T 3kzv_A 3 KVILVTGVSRGIGKSIVDVLFSLDK 27 (254)
T ss_dssp CEEEECSTTSHHHHHHHHHHHHHCS
T ss_pred CEEEEECCCchHHHHHHHHHHhcCC
Confidence 4668888888888888877666653
No 223
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=84.39 E-value=6.5 Score=31.00 Aligned_cols=32 Identities=31% Similarity=0.321 Sum_probs=25.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 38 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGR 38 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 46788888888999998887777887766644
No 224
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=84.38 E-value=7.1 Score=29.81 Aligned_cols=32 Identities=25% Similarity=0.291 Sum_probs=25.7
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r 39 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGT 39 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 46788888999999999887778887776654
No 225
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=84.26 E-value=14 Score=29.18 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=24.7
Q ss_pred CeEEEeeCC--CchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ss--GN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+ |.-|.++|..-...|.+++++...
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~ 56 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYAT 56 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 367788776 788999888877778877766543
No 226
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=84.21 E-value=15 Score=29.62 Aligned_cols=32 Identities=19% Similarity=0.204 Sum_probs=26.4
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+||..+|--|.++|..-...|.+++++-.
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~ 78 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDL 78 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEec
Confidence 47788888888999999988888998887744
No 227
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=83.93 E-value=7.4 Score=31.16 Aligned_cols=32 Identities=28% Similarity=0.296 Sum_probs=24.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGR 58 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 46788888888999998887777887666544
No 228
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=83.92 E-value=6.2 Score=32.33 Aligned_cols=62 Identities=16% Similarity=0.134 Sum_probs=43.5
Q ss_pred HHcCCCCCCCeEEEeeCC--CchHHHHHHHHHHc-CCcEEEEEcCC--CCHHHHHHHHHcCCEEEEEC
Q 028372 60 EDKGLITPGKTTLIEVTS--GNTGVGLAFIAAAR-GYNLIIVMPST--CSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 60 ~~~g~~~~~~~~vv~~ss--GN~g~alA~~a~~~-g~~~~vvvp~~--~~~~~~~~~~~~Ga~v~~v~ 122 (210)
++.|.+. |.+..+..-. +|.+.+++.++.++ |++++++.|+. .++.-++.++..|+++..+.
T Consensus 144 e~~g~l~-glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 210 (306)
T 4ekn_B 144 REIGRID-GIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 210 (306)
T ss_dssp HHHSCST-TCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred HHhCCcC-CCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEc
Confidence 3456544 3333333322 68999999999999 99999999985 35555666777888886664
No 229
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=83.92 E-value=8.7 Score=30.34 Aligned_cols=32 Identities=19% Similarity=0.330 Sum_probs=24.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|--|.++|..-...|.+++++-.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r 60 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGR 60 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 36688888888888888887777887666543
No 230
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=83.80 E-value=11 Score=32.41 Aligned_cols=99 Identities=15% Similarity=0.054 Sum_probs=61.2
Q ss_pred CCCCCchhhHHHHHHHHHHHHcCCCC-CCCeEEEeeCCCchHHHHHHHHHH-cCCcEEEEEcCCCCH-------------
Q 028372 41 MEPCSSVKDRIAYSMIKDAEDKGLIT-PGKTTLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPSTCSM------------- 105 (210)
Q Consensus 41 ~~ptGS~K~R~a~~~~~~a~~~g~~~-~~~~~vv~~ssGN~g~alA~~a~~-~g~~~~vvvp~~~~~------------- 105 (210)
..|.|.++. ....+....+++.++ .++..+||.+|+--|.|+|..... .|.+++++-.+....
T Consensus 35 a~p~g~~~~--v~~qi~y~~~~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~ 112 (422)
T 3s8m_A 35 THPLGCERN--VLEQIAATRARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSA 112 (422)
T ss_dssp CCHHHHHHH--HHHHHHHHHHTCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHH
T ss_pred CCchhHHHH--HHHHHHHHhhccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhH
Confidence 456665443 334455556677763 456778888888889999998778 999988775443221
Q ss_pred HHHHHHHHcCCEEEEECCCC-CHHHHHHHHHHHHHhC
Q 028372 106 ERRIVLRALGAEIILADSAL-RFEEILEKGEEILKKT 141 (210)
Q Consensus 106 ~~~~~~~~~Ga~v~~v~~~~-~~~~~~~~a~~~~~~~ 141 (210)
...+.++..|.++..+..+- +.++..+...+..++.
T Consensus 113 a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~ 149 (422)
T 3s8m_A 113 AFDKHAKAAGLYSKSINGDAFSDAARAQVIELIKTEM 149 (422)
T ss_dssp HHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 12356677898877665432 2344444455555544
No 231
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=83.78 E-value=12 Score=28.90 Aligned_cols=30 Identities=13% Similarity=0.246 Sum_probs=23.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIV 98 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vv 98 (210)
+..+|+..+|.-|.++|..-...|.+++++
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~ 36 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFS 36 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 467888888999999998877778776655
No 232
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=83.74 E-value=6.5 Score=31.10 Aligned_cols=30 Identities=20% Similarity=0.163 Sum_probs=23.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIV 98 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vv 98 (210)
+..+|+..+|.-|.++|..-...|.+++++
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~ 59 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFIC 59 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 477888889999999998877778776554
No 233
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=83.73 E-value=8.8 Score=30.44 Aligned_cols=31 Identities=26% Similarity=0.446 Sum_probs=23.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv 99 (210)
+..+|+..+|--|.++|..-...|.+++++-
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 64 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAEGYSVVITG 64 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 3678888888888888887777787766554
No 234
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=83.60 E-value=8.4 Score=30.73 Aligned_cols=54 Identities=17% Similarity=0.096 Sum_probs=40.2
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADS 123 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~ 123 (210)
+.+|+..+|+.|.+++......|.+++++..... ....+..+...|.+++..+-
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl 67 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGEL 67 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCT
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecC
Confidence 5788888999999999998888999999887653 33334444556777766653
No 235
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=83.54 E-value=8.8 Score=30.04 Aligned_cols=32 Identities=28% Similarity=0.294 Sum_probs=24.6
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++-.
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGR 52 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 46788888888888888887777887666544
No 236
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=83.45 E-value=11 Score=29.74 Aligned_cols=32 Identities=19% Similarity=0.167 Sum_probs=25.6
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|--|.++|..-...|.+++++-.
T Consensus 6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r 37 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFVAEGARVAVLDK 37 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence 47788888898999999888888887776543
No 237
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=83.44 E-value=5.4 Score=33.13 Aligned_cols=55 Identities=25% Similarity=0.255 Sum_probs=39.5
Q ss_pred cCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 62 KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 62 ~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
+..+++|.+.+|.+ +|..|.+.+..|+.+|.+++++.. ++.+++.++.+|++.+.
T Consensus 189 ~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~Vi~~~~---~~~~~~~a~~lGa~~vi 243 (369)
T 1uuf_A 189 HWQAGPGKKVGVVG-IGGLGHMGIKLAHAMGAHVVAFTT---SEAKREAAKALGADEVV 243 (369)
T ss_dssp HTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES---SGGGHHHHHHHTCSEEE
T ss_pred hcCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEe
Confidence 33567776666654 588999999999999998555543 35566777788986544
No 238
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=83.35 E-value=6.8 Score=32.36 Aligned_cols=56 Identities=16% Similarity=0.235 Sum_probs=40.3
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCc-EEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYN-LIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~-~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
+...+++|.+.+|.. +|..|...+..|+.+|.. ++++.+ ++.+++.++.+|++.+.
T Consensus 184 ~~~~~~~g~~VlV~G-aG~vG~~avqla~~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi 240 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVDI---NKDKFARAKEFGATECI 240 (373)
T ss_dssp TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECS---CGGGHHHHHHHTCSEEE
T ss_pred hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHcCCceEe
Confidence 456677886766655 699999999999999984 444322 45677778889986543
No 239
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=83.30 E-value=10 Score=27.39 Aligned_cols=22 Identities=23% Similarity=0.288 Sum_probs=13.7
Q ss_pred HhHHHHHHHhhCCCCCEEEEccCc
Q 028372 161 ETTGPEIWQDSGGKVDAFISGIGT 184 (210)
Q Consensus 161 ~t~~~Ei~~q~~~~~d~vv~pvG~ 184 (210)
..+..++.+++ +. |.+|.+.|+
T Consensus 86 ~~~~~~i~~~~-G~-dVLVnnAgg 107 (157)
T 3gxh_A 86 EAFFAAMDQHK-GK-DVLVHCLAN 107 (157)
T ss_dssp HHHHHHHHHTT-TS-CEEEECSBS
T ss_pred HHHHHHHHhcC-CC-CEEEECCCC
Confidence 34444555556 45 888888875
No 240
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=83.23 E-value=11 Score=29.68 Aligned_cols=72 Identities=15% Similarity=0.159 Sum_probs=48.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHh
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADSA-LRFEEILEKGEEILKK 140 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 140 (210)
+..+||..+|.-|.++|..-...|.++++....... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 377899999999999999988889998886554432 23345566778887766543 2344444445555444
No 241
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=83.15 E-value=15 Score=28.94 Aligned_cols=30 Identities=27% Similarity=0.413 Sum_probs=24.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIV 98 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vv 98 (210)
+..+|+..+|--|.++|..-...|.+++++
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~ 55 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAGANIVLN 55 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 467888888989999998888888776654
No 242
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=83.15 E-value=8.5 Score=29.99 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=47.4
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHh
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADSA-LRFEEILEKGEEILKK 140 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 140 (210)
+..+|+..+|--|.++|..-...|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 477889899999999999988899998887554432 23345566677766655443 2244444445555444
No 243
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=83.01 E-value=9.4 Score=30.17 Aligned_cols=32 Identities=13% Similarity=0.165 Sum_probs=25.7
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|--|.++|..-...|.+++++-.
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r 59 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADV 59 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 47788888899999999888888888776543
No 244
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=83.00 E-value=14 Score=28.54 Aligned_cols=32 Identities=25% Similarity=0.335 Sum_probs=25.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVAR 39 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 46788999999999999888888887766644
No 245
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=82.86 E-value=8.3 Score=29.99 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=25.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++.+|+..+|.-|.++|..-...|.+++++..
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 44 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADL 44 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 47788999999999999888888887766543
No 246
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=82.82 E-value=5 Score=33.60 Aligned_cols=66 Identities=29% Similarity=0.342 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHH-cCC-CCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372 50 RIAYSMIKDAED-KGL-ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (210)
Q Consensus 50 R~a~~~~~~a~~-~g~-~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~ 119 (210)
|+..+.+..+.+ .|. .-.| ++|+....||-|..+|..++.+|.+++ +.+.+ +.+.+..+.+|++.+
T Consensus 155 ~Gv~~~~~~~~~~~G~~~L~G-ktV~I~G~GnVG~~~A~~l~~~GakVv-vsD~~--~~~~~~a~~~ga~~v 222 (355)
T 1c1d_A 155 VGVFEAMKATVAHRGLGSLDG-LTVLVQGLGAVGGSLASLAAEAGAQLL-VADTD--TERVAHAVALGHTAV 222 (355)
T ss_dssp HHHHHHHHHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC--HHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHhcCCCCCCC-CEEEEECcCHHHHHHHHHHHHCCCEEE-EEeCC--ccHHHHHHhcCCEEe
Confidence 566666666543 453 2234 667778899999999999999999887 55443 233444556777654
No 247
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=82.75 E-value=18 Score=29.56 Aligned_cols=58 Identities=17% Similarity=0.216 Sum_probs=38.9
Q ss_pred HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372 59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (210)
Q Consensus 59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~ 119 (210)
+.+...+++|.+.+|.+ +|..|.+....|+.+|.+.++.+. .++.+++.++.++.+++
T Consensus 171 ~l~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~l~~~~~ 228 (363)
T 3m6i_A 171 GLQRAGVRLGDPVLICG-AGPIGLITMLCAKAAGACPLVITD--IDEGRLKFAKEICPEVV 228 (363)
T ss_dssp HHHHHTCCTTCCEEEEC-CSHHHHHHHHHHHHTTCCSEEEEE--SCHHHHHHHHHHCTTCE
T ss_pred HHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHhchhcc
Confidence 33455677887766654 599999999999999997333332 24667777777643444
No 248
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=82.70 E-value=15 Score=28.48 Aligned_cols=32 Identities=25% Similarity=0.285 Sum_probs=23.3
Q ss_pred CeEEEeeCCC-chHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSG-NTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssG-N~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+| .-|.++|..-...|.+++++-.
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r 55 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDY 55 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecC
Confidence 3667777666 5899998888888888666544
No 249
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=82.51 E-value=16 Score=28.64 Aligned_cols=32 Identities=25% Similarity=0.264 Sum_probs=26.5
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|--|.++|..-...|.+++++-.
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEec
Confidence 47788888898999999988888998877654
No 250
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=82.39 E-value=15 Score=28.34 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=24.9
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++..+|+..+|--|.++|..-...|.+++++-.
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 347788888888888888887777877666543
No 251
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=81.98 E-value=10 Score=29.31 Aligned_cols=33 Identities=21% Similarity=0.334 Sum_probs=25.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+|--|.++|..-...|.+++++...
T Consensus 8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCC
Confidence 367888888888888888888888887776544
No 252
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=81.86 E-value=6.7 Score=30.99 Aligned_cols=54 Identities=17% Similarity=0.226 Sum_probs=38.4
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC-C--CH-HHHH---HHHHcCCEEEEECC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST-C--SM-ERRI---VLRALGAEIILADS 123 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~-~--~~-~~~~---~~~~~Ga~v~~v~~ 123 (210)
+.+|+..+|..|.+++......|.+++++.... . .+ .+.+ .+...|.+++..+-
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~ 64 (307)
T 2gas_A 4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDI 64 (307)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCC
Confidence 668888999999999999888899999888754 1 12 3332 33445777766653
No 253
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=81.84 E-value=15 Score=27.97 Aligned_cols=49 Identities=14% Similarity=0.171 Sum_probs=31.7
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
..++....|..|..+|..-...|. ++++ ..+ +.+.+.++ .|.+++.-+.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vi-d~~--~~~~~~~~-~~~~~i~gd~ 58 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLA-EDE--NVRKKVLR-SGANFVHGDP 58 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEE-SCG--GGHHHHHH-TTCEEEESCT
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEE-ECC--HHHHHHHh-cCCeEEEcCC
Confidence 346667789999999988877787 5444 332 34445555 6766655443
No 254
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=81.61 E-value=11 Score=31.44 Aligned_cols=62 Identities=19% Similarity=0.199 Sum_probs=42.8
Q ss_pred HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHH----HHcCCEEEEEC
Q 028372 60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVL----RALGAEIILAD 122 (210)
Q Consensus 60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~----~~~Ga~v~~v~ 122 (210)
++.|.++ |.+..+..-.+|.+.+++.+++.+|++++++.|+.- ++.-++.+ +..|+++..+.
T Consensus 172 E~~G~l~-glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~ 239 (340)
T 4ep1_A 172 EETNTFK-GIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILH 239 (340)
T ss_dssp HHHSCCT-TCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEES
T ss_pred HHhCCCC-CCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 3456544 335445555589999999999999999999999864 33333333 36788887765
No 255
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=81.40 E-value=10 Score=29.59 Aligned_cols=32 Identities=16% Similarity=0.130 Sum_probs=25.7
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 47788999999999999888778887766543
No 256
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=81.36 E-value=2.4 Score=33.37 Aligned_cols=26 Identities=15% Similarity=0.344 Sum_probs=23.8
Q ss_pred CCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372 77 SGNTGVGLAFIAAARGYNLIIVMPST 102 (210)
Q Consensus 77 sGN~g~alA~~a~~~g~~~~vvvp~~ 102 (210)
||-.|.++|.++...|.+++++..+.
T Consensus 28 SG~mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHLGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 89999999999999999999998654
No 257
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=81.24 E-value=8.8 Score=29.86 Aligned_cols=33 Identities=12% Similarity=0.179 Sum_probs=26.5
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++..+|+..+|--|.++|..-...|.+++++-.
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 347788888999999999988888988776644
No 258
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=81.21 E-value=13 Score=28.86 Aligned_cols=32 Identities=22% Similarity=0.229 Sum_probs=26.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r 48 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADI 48 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 47788999999999999988888887766643
No 259
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=81.17 E-value=17 Score=28.01 Aligned_cols=33 Identities=12% Similarity=0.081 Sum_probs=27.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+|.-|.++|..-...|.+++++...
T Consensus 8 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~ 40 (250)
T 2fwm_X 8 KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQA 40 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCc
Confidence 477899999999999999988889988877654
No 260
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=81.13 E-value=5.3 Score=31.05 Aligned_cols=55 Identities=15% Similarity=0.071 Sum_probs=39.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcC---CcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARG---YNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g---~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
+..+|+..+|.-|.++|......| .+++++.........++.+...+.++..+..
T Consensus 22 k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~ 79 (267)
T 1sny_A 22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEI 79 (267)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEEC
T ss_pred CEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEe
Confidence 467888888999999999988889 8888887665443444555444666655543
No 261
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=80.91 E-value=17 Score=28.03 Aligned_cols=33 Identities=18% Similarity=0.114 Sum_probs=26.5
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+|.-|.++|..-...|.+++++...
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLR 39 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 477899999999999998888888877666543
No 262
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=80.89 E-value=5.7 Score=30.28 Aligned_cols=51 Identities=22% Similarity=0.273 Sum_probs=38.5
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCC-EEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGA-EIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga-~v~~v~ 122 (210)
++.+|+..+|.-|.+++......|.+++++.... .+...+...+. +++..+
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~---~~~~~~~~~~~~~~~~~D 73 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE---EQGPELRERGASDIVVAN 73 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG---GGHHHHHHTTCSEEEECC
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh---HHHHHHHhCCCceEEEcc
Confidence 4778999999999999999989999999987653 23444444566 666554
No 263
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=80.88 E-value=12 Score=30.78 Aligned_cols=61 Identities=16% Similarity=0.200 Sum_probs=42.8
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHH----HcCCEEEEEC
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD 122 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~v~ 122 (210)
+.|.++ |.+..+..-.+|.+.+++.+++.+|++++++.|+.- ++.-.+.++ ..|+++..+.
T Consensus 149 ~~g~l~-gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 215 (315)
T 1pvv_A 149 KKGTIK-GVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLH 215 (315)
T ss_dssp HHSCCT-TCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HhCCcC-CcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 456554 334444444489999999999999999999999865 332333333 6788887775
No 264
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=80.83 E-value=9.2 Score=30.19 Aligned_cols=55 Identities=18% Similarity=0.122 Sum_probs=41.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~ 123 (210)
+..+|+..+|--|.++|..-...|.+++++-.... .....+.++..|.++..+..
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 89 (275)
T 4imr_A 34 RTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAG 89 (275)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEe
Confidence 47788888888999999998889999887765433 34455666777887776654
No 265
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=80.48 E-value=11 Score=28.89 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=25.5
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGR 38 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 46788888899999999887778888766654
No 266
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=80.42 E-value=12 Score=29.05 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=25.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|--|.++|..-...|.+++++..
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 47788888888999988887777887666543
No 267
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=80.40 E-value=8.1 Score=31.69 Aligned_cols=62 Identities=18% Similarity=0.123 Sum_probs=43.1
Q ss_pred HHcCCCCCCCeEEEeeCC--CchHHHHHHHHHHc-CCcEEEEEcCCC--CHHHHHHHHHcCCEEEEEC
Q 028372 60 EDKGLITPGKTTLIEVTS--GNTGVGLAFIAAAR-GYNLIIVMPSTC--SMERRIVLRALGAEIILAD 122 (210)
Q Consensus 60 ~~~g~~~~~~~~vv~~ss--GN~g~alA~~a~~~-g~~~~vvvp~~~--~~~~~~~~~~~Ga~v~~v~ 122 (210)
++.|.++ |.+..+..-. +|.+.+++.++.++ |++++++.|+.- ++...+.++..|+++..+.
T Consensus 147 e~~g~l~-gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 213 (310)
T 3csu_A 147 ETQGRLD-NLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHS 213 (310)
T ss_dssp HHHSCSS-SCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECS
T ss_pred HHhCCcC-CcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEc
Confidence 3456554 3343333332 69999999999999 999999999854 4445566777888876654
No 268
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=80.24 E-value=26 Score=31.24 Aligned_cols=55 Identities=18% Similarity=0.117 Sum_probs=37.1
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
++..+||..++--|.++|......|.++++. .........+.++..|.+++.+..
T Consensus 322 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~-~~~~~~~~~~~i~~~g~~~~~~~~ 376 (604)
T 2et6_A 322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVVN-DFKDATKTVDEIKAAGGEAWPDQH 376 (604)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEE-CSSCCHHHHHHHHHTTCEEEEECC
T ss_pred CCeEEEECcchHHHHHHHHHHHHCCCEEEEE-eCccHHHHHHHHHhcCCeEEEEEc
Confidence 3466788888888888888888889887664 222234445556666777766653
No 269
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=80.05 E-value=14 Score=30.49 Aligned_cols=61 Identities=13% Similarity=0.180 Sum_probs=41.6
Q ss_pred HcCCCCCCCeEEEeeCC-CchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHH----HcCCEEEEEC
Q 028372 61 DKGLITPGKTTLIEVTS-GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD 122 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ss-GN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~v~ 122 (210)
+.|.++ |.+..+..-. +|.+.+++.++..+|++++++.|+.- ++.-.+.++ ..|+++..+.
T Consensus 161 ~~g~l~-gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 228 (325)
T 1vlv_A 161 NFGRLK-GVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTS 228 (325)
T ss_dssp HHSCST-TCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEES
T ss_pred HhCCcC-CcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 456554 3333333333 69999999999999999999999854 333333343 7788887775
No 270
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=79.71 E-value=20 Score=27.97 Aligned_cols=32 Identities=25% Similarity=0.238 Sum_probs=26.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|--|.++|..-...|.+++++..
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r 38 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDR 38 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 47788999999999999988888888776644
No 271
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=79.68 E-value=15 Score=30.02 Aligned_cols=62 Identities=18% Similarity=0.215 Sum_probs=41.8
Q ss_pred HHcCCCCCCCeEEEeeCC-CchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHH----HcCCEEEEEC
Q 028372 60 EDKGLITPGKTTLIEVTS-GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD 122 (210)
Q Consensus 60 ~~~g~~~~~~~~vv~~ss-GN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~v~ 122 (210)
++.|.++ |.+..+..-. +|.+.+++.++..+|++++++.|+.- ++.-.+.++ ..|+++..+.
T Consensus 141 e~~g~l~-gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 209 (307)
T 2i6u_A 141 ERKGALR-GLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTA 209 (307)
T ss_dssp HHHSCCT-TCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HHhCCcC-CeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 3456554 3233333333 69999999999999999999999865 332333333 6788887775
No 272
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=79.66 E-value=19 Score=29.27 Aligned_cols=103 Identities=14% Similarity=0.139 Sum_probs=55.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE-cCCCC-HHHHHHHH-HcCCEEEEECCCC-CHHHHHHHHHHHHHhCCCe
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM-PSTCS-MERRIVLR-ALGAEIILADSAL-RFEEILEKGEEILKKTPDG 144 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv-p~~~~-~~~~~~~~-~~Ga~v~~v~~~~-~~~~~~~~a~~~~~~~~~~ 144 (210)
+..+|+..+|--|.++|..-...|.+++++. ..... ....+.++ ..|.++..+..+- +.++..... .+ +
T Consensus 47 k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~----~~--~- 119 (328)
T 2qhx_A 47 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSG----AD--G- 119 (328)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccc----cc--c-
Confidence 4778888888899999988888899887765 32111 11122232 4566665544321 000000000 00 0
Q ss_pred EEcCCCCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCch
Q 028372 145 YLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTG 185 (210)
Q Consensus 145 ~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~G 185 (210)
..+.........+..++.+++ +.+|.+|..+|..
T Consensus 120 ------~~~~~~~~~v~~~~~~~~~~~-g~iD~lVnnAG~~ 153 (328)
T 2qhx_A 120 ------SAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSF 153 (328)
T ss_dssp -------CCBCHHHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred ------ccccccHHHHHHHHHHHHHhc-CCCCEEEECCCCC
Confidence 011111223345556677777 5799999999864
No 273
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=79.31 E-value=12 Score=29.20 Aligned_cols=72 Identities=24% Similarity=0.138 Sum_probs=47.5
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHH----HHHHHHHcCCEEEEECCCC-CHHHHHHHHHHHHHh
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSME----RRIVLRALGAEIILADSAL-RFEEILEKGEEILKK 140 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~----~~~~~~~~Ga~v~~v~~~~-~~~~~~~~a~~~~~~ 140 (210)
+..+|+..+|--|.++|..-...|.+++++........ ..+.++..|.++..+..+- +.++..+..++..++
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 88 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE 88 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 47788888888999999988888999888765433322 2344566688887766432 344444555555444
No 274
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=79.30 E-value=20 Score=27.84 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=27.7
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+|.-|.++|..-...|.+++++...
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 54 (253)
T 2nm0_A 22 RSVLVTGGNRGIGLAIARAFADAGDKVAITYRS 54 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 477899999999999999988889888777654
No 275
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=79.24 E-value=10 Score=30.96 Aligned_cols=56 Identities=11% Similarity=0.181 Sum_probs=40.1
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcC-CcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARG-YNLIIVMPSTCSMERRIVLRALGAEIILA 121 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g-~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v 121 (210)
+.+.+++|.+.+|...+|..|.+.+..|+.+| .+++... +..+.+.++ +|++.+..
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~----~~~~~~~~~-~ga~~~~~ 192 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA----STFKHEAIK-DSVTHLFD 192 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE----CGGGHHHHG-GGSSEEEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC----CHHHHHHHH-cCCcEEEc
Confidence 55678888777777777999999999999885 4544443 345667777 88876554
No 276
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=79.04 E-value=9.8 Score=30.82 Aligned_cols=53 Identities=21% Similarity=0.108 Sum_probs=38.3
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC-CCHHHHH---HHHHcCCEEEEEC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST-CSMERRI---VLRALGAEIILAD 122 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~-~~~~~~~---~~~~~Ga~v~~v~ 122 (210)
+.+|+..+|..|.+++......|.+++++.... ..+.+.+ .++..|.+++..+
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~D 68 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGL 68 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECC
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEee
Confidence 678899999999999999888999999998764 2333333 3334455555554
No 277
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=79.02 E-value=12 Score=29.27 Aligned_cols=32 Identities=22% Similarity=0.258 Sum_probs=26.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|--|.++|..-...|.+++++..
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 48 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLAR 48 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 47788899999999999988888998887654
No 278
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=78.64 E-value=16 Score=28.02 Aligned_cols=57 Identities=19% Similarity=0.156 Sum_probs=41.5
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEECCC
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADSA 124 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~~~ 124 (210)
++..+|+..+|--|.++|..-...|.+++++...+.. ....+.++..+.++..+..+
T Consensus 7 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 65 (255)
T 3icc_A 7 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGAN 65 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecC
Confidence 3477888888889999999988899988876555432 23345667778888776643
No 279
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=78.49 E-value=18 Score=31.75 Aligned_cols=119 Identities=14% Similarity=0.114 Sum_probs=68.6
Q ss_pred HHHHHHHcCCcEEE---------EEcCCCC--HHHHHHHHHcCCEEEEECCCC---C-HHHHHHHHHHHHHhCCCeEE-c
Q 028372 84 LAFIAAARGYNLII---------VMPSTCS--MERRIVLRALGAEIILADSAL---R-FEEILEKGEEILKKTPDGYL-L 147 (210)
Q Consensus 84 lA~~a~~~g~~~~v---------vvp~~~~--~~~~~~~~~~Ga~v~~v~~~~---~-~~~~~~~a~~~~~~~~~~~~-~ 147 (210)
+..+|+..|.++.+ ..|.-+. .......-..|++.+....+. . -.++.+...+.+++.+..++ -
T Consensus 283 ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~ 362 (500)
T 1a3w_A 283 LIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYL 362 (500)
T ss_dssp HHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHH
T ss_pred HHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhh
Confidence 45678999999764 2222111 123444455799999887642 1 24566555555544333221 1
Q ss_pred ------CC-CCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372 148 ------RQ-FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV 208 (210)
Q Consensus 148 ------~~-~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~ 208 (210)
.. ...+..........+.++.++++ ..+||+..-||.|+ +.+....|.+.|++++
T Consensus 363 ~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~--a~aIv~~T~sG~ta----~~isr~RP~~pI~a~t 424 (500)
T 1a3w_A 363 PNYDDMRNCTPKPTSTTETVAASAVAAVFEQK--AKAIIVLSTSGTTP----RLVSKYRPNCPIILVT 424 (500)
T ss_dssp HHHHHHTTSCCSSCCHHHHHHHHHHHHHHHHT--CSCEEEECSSSHHH----HHHHHTCCSSCEEEEE
T ss_pred hHHHhhhhccccccchHHHHHHHHHHHHHhcC--CCEEEEECCCchHH----HHHHhhCCCCCEEEEc
Confidence 00 01111212233444567777773 56899999999985 4455578999999987
No 280
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=78.46 E-value=7.1 Score=32.02 Aligned_cols=61 Identities=20% Similarity=0.183 Sum_probs=43.9
Q ss_pred HHcCCCCCCCeEEEeeCC---CchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHHHcCCEEEEEC
Q 028372 60 EDKGLITPGKTTLIEVTS---GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLRALGAEIILAD 122 (210)
Q Consensus 60 ~~~g~~~~~~~~vv~~ss---GN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~~~Ga~v~~v~ 122 (210)
++.|.++ | .+|+-..- +|.+.+++.++.++|++++++.|+.- ++.-.+.++..|+++..+.
T Consensus 148 e~~g~l~-g-l~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 213 (308)
T 1ml4_A 148 KEFGRID-G-LKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETT 213 (308)
T ss_dssp HHSSCSS-S-EEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred HHhCCCC-C-eEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEc
Confidence 3456554 3 33443333 68999999999999999999999854 4445566777898877765
No 281
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=78.10 E-value=9.3 Score=31.56 Aligned_cols=58 Identities=21% Similarity=0.232 Sum_probs=42.1
Q ss_pred HcCCCC-----CCCeEEEeeCCCchHHHHHHHHHH-cCCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372 61 DKGLIT-----PGKTTLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (210)
Q Consensus 61 ~~g~~~-----~~~~~vv~~ssGN~g~alA~~a~~-~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v 121 (210)
+...++ +|.+.+|.+.+|..|.+.+..|+. .|.+++++.+ .+.+++.++.+|++.+..
T Consensus 160 ~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---~~~~~~~~~~lGad~vi~ 223 (363)
T 4dvj_A 160 DRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS---RPETQEWVKSLGAHHVID 223 (363)
T ss_dssp TTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---SHHHHHHHHHTTCSEEEC
T ss_pred HhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---CHHHHHHHHHcCCCEEEe
Confidence 445555 665656666689999999999998 4887666543 467888889999976553
No 282
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=78.10 E-value=4.5 Score=31.47 Aligned_cols=64 Identities=13% Similarity=0.051 Sum_probs=41.8
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHH
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKG 134 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a 134 (210)
..+|+..+|--|.++|..-...|.+++++............++..|.+++.++. ...+...+.+
T Consensus 3 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~-~~v~~~~~~~ 66 (254)
T 1zmt_A 3 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSE-QEPAELIEAV 66 (254)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCC-CSHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECH-HHHHHHHHHH
Confidence 568888889999999999888999877765443333333335556777766632 3354444433
No 283
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=78.09 E-value=22 Score=27.64 Aligned_cols=34 Identities=18% Similarity=0.118 Sum_probs=28.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST 102 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~ 102 (210)
+..+|+..+|.-|.++|..-...|.+++++....
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 42 (264)
T 2dtx_A 9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHD 42 (264)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCc
Confidence 4778999999999999999888899887776543
No 284
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=77.81 E-value=9.8 Score=29.32 Aligned_cols=73 Identities=10% Similarity=0.022 Sum_probs=43.7
Q ss_pred CCeEEEeeCCCchHHHHHHHHHH-cCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHh
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPSTCS-MERRIVLRALGAEIILADSA-LRFEEILEKGEEILKK 140 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~-~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 140 (210)
+++.+|+..+|.-|.++|..-.. .|.+++++...... ....+.++..|.++..+..+ .+.++.....+++.++
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 34778888889999999988777 89988877654221 22234455556655544432 2234444444444443
No 285
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=77.57 E-value=22 Score=27.29 Aligned_cols=31 Identities=6% Similarity=0.104 Sum_probs=24.5
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv 99 (210)
+..+|+..+|--|.++|..-...|.+++++-
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 33 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFID 33 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 4678888889999999988777787766653
No 286
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=77.46 E-value=15 Score=28.57 Aligned_cols=32 Identities=19% Similarity=0.172 Sum_probs=26.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEEC
Confidence 47789999999999999888888887776644
No 287
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=77.43 E-value=2.6 Score=31.59 Aligned_cols=28 Identities=18% Similarity=0.235 Sum_probs=25.8
Q ss_pred EEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372 72 LIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (210)
Q Consensus 72 vv~~ssGN~g~alA~~a~~~g~~~~vvv 99 (210)
|+...+|-.|.++|+..++.|++++|+=
T Consensus 5 V~IIGaGpaGL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 5 IAIIGTGIAGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEE
Confidence 7778999999999999999999999984
No 288
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=77.40 E-value=12 Score=29.80 Aligned_cols=103 Identities=14% Similarity=0.137 Sum_probs=53.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE-cCCCC-HHHHHHHH-HcCCEEEEECCCCC-HHHHHHHHHHHHHhCCCe
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM-PSTCS-MERRIVLR-ALGAEIILADSALR-FEEILEKGEEILKKTPDG 144 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv-p~~~~-~~~~~~~~-~~Ga~v~~v~~~~~-~~~~~~~a~~~~~~~~~~ 144 (210)
+..+|+..+|--|.++|..-...|.+++++. ..... ....+.++ ..|.++..+..+-. .++....+ .+ +
T Consensus 10 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~----~~--~- 82 (291)
T 1e7w_A 10 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSG----AD--G- 82 (291)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC-----------
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccc----cc--c-
Confidence 4678888888889999988888898877765 32111 11122233 45655555443210 00000000 00 0
Q ss_pred EEcCCCCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCch
Q 028372 145 YLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTG 185 (210)
Q Consensus 145 ~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~G 185 (210)
..+.........+..++.+++ +++|.+|..+|..
T Consensus 83 ------~~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~ 116 (291)
T 1e7w_A 83 ------SAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSF 116 (291)
T ss_dssp ------CCCBCHHHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred ------ccccchHHHHHHHHHHHHHhc-CCCCEEEECCCCC
Confidence 011111122344555666667 5799999999854
No 289
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=77.17 E-value=15 Score=28.66 Aligned_cols=33 Identities=27% Similarity=0.352 Sum_probs=27.4
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+|--|.++|..-...|.+++++...
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 377888888999999999888889988887654
No 290
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=77.15 E-value=22 Score=27.78 Aligned_cols=72 Identities=17% Similarity=0.105 Sum_probs=45.1
Q ss_pred CeEEEeeCC--CchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHH-cC-CEEEEECCCCCHHHHHHHHHHHHHhC
Q 028372 69 KTTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRA-LG-AEIILADSALRFEEILEKGEEILKKT 141 (210)
Q Consensus 69 ~~~vv~~ss--GN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~-~G-a~v~~v~~~~~~~~~~~~a~~~~~~~ 141 (210)
+..+|+..+ |.-|.++|..-...|.+++++..........+.+.. .| ..++.++-. +.++..+..++..++.
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVS-KEEHFKSLYNSVKKDL 82 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 467888877 889999999988899998887665433444555543 34 344445543 3444444555555543
No 291
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=76.83 E-value=10 Score=29.69 Aligned_cols=32 Identities=25% Similarity=0.274 Sum_probs=25.3
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGR 38 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 46788888899999999887778887776654
No 292
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=76.46 E-value=9 Score=31.26 Aligned_cols=51 Identities=18% Similarity=0.165 Sum_probs=37.2
Q ss_pred CCCCCCeEEEeeCCCchHHHHHHHHHHc--CCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372 64 LITPGKTTLIEVTSGNTGVGLAFIAAAR--GYNLIIVMPSTCSMERRIVLRALGAEII 119 (210)
Q Consensus 64 ~~~~~~~~vv~~ssGN~g~alA~~a~~~--g~~~~vvvp~~~~~~~~~~~~~~Ga~v~ 119 (210)
.+ +|.+.+|... |..|.+.+..|+.+ |.+++++.+ ++.+++.++.+|++.+
T Consensus 168 ~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~v 220 (344)
T 2h6e_A 168 KF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISR---SKKHRDFALELGADYV 220 (344)
T ss_dssp TC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECS---CHHHHHHHHHHTCSEE
T ss_pred CC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeC---CHHHHHHHHHhCCCEE
Confidence 45 6766566555 89999999999999 987544432 5677788888998654
No 293
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=76.27 E-value=11 Score=24.93 Aligned_cols=50 Identities=16% Similarity=0.249 Sum_probs=34.8
Q ss_pred eEEEeeCCCchHHHHHHHHHHcC-CcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARG-YNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g-~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
+.+|... |..|.+++......| .+++++.+ .+.+.+.+...|.+++..+.
T Consensus 7 ~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r---~~~~~~~~~~~~~~~~~~d~ 57 (118)
T 3ic5_A 7 NICVVGA-GKIGQMIAALLKTSSNYSVTVADH---DLAALAVLNRMGVATKQVDA 57 (118)
T ss_dssp EEEEECC-SHHHHHHHHHHHHCSSEEEEEEES---CHHHHHHHHTTTCEEEECCT
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCceEEEEeC---CHHHHHHHHhCCCcEEEecC
Confidence 4445544 999999999999999 77666544 35555666666777766554
No 294
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=76.19 E-value=22 Score=28.80 Aligned_cols=49 Identities=8% Similarity=0.076 Sum_probs=32.6
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
.+++..+.|..|..+|......|. +++ +..+ +.+.+ ++..|..++.-+.
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~v-id~~--~~~~~-~~~~~~~~i~gd~ 164 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVL-AEDE--NVRKK-VLRSGANFVHGDP 164 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEE-ESCG--GGHHH-HHHTTCEEEESCT
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEE-EeCC--hhhhh-HHhCCcEEEEeCC
Confidence 357777789999999888777787 444 4332 34445 6667777665554
No 295
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=76.13 E-value=20 Score=29.55 Aligned_cols=61 Identities=16% Similarity=0.161 Sum_probs=41.8
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHH----HHcCCEEEEEC
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVL----RALGAEIILAD 122 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~----~~~Ga~v~~v~ 122 (210)
+.|.+. |.+..+..=.+|.+.+++.+++.+|++++++.|+.- ++.-++.+ +..|+++..+.
T Consensus 151 ~~g~l~-glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 217 (323)
T 3gd5_A 151 NFGRLA-GLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILR 217 (323)
T ss_dssp HHSCCT-TCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCCC-CCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 456544 334444555589999999999999999999999864 33323322 34687777665
No 296
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=76.01 E-value=17 Score=27.87 Aligned_cols=73 Identities=15% Similarity=0.176 Sum_probs=44.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCH-HHHHHH-HHcCCEEEEECCC-CCHHHHHHHHHHHHHhC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSM-ERRIVL-RALGAEIILADSA-LRFEEILEKGEEILKKT 141 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~-~~~~~~-~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 141 (210)
++.+|+..+|.-|.++|..-...|.+++++....... ...+.+ +.++.++..+..+ .+.++..+..++..++.
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 90 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 4678888999999999999888999888877643332 222333 3346666655433 22344444445554443
No 297
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=75.94 E-value=36 Score=28.96 Aligned_cols=100 Identities=13% Similarity=-0.035 Sum_probs=55.8
Q ss_pred CCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH--HHHcCCcEEEEEcCCCC-------------
Q 028372 40 TMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI--AAARGYNLIIVMPSTCS------------- 104 (210)
Q Consensus 40 ~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~--a~~~g~~~~vvvp~~~~------------- 104 (210)
...|.|..+.. ...+....+++.+..++..+|+.+++--|.++|.+ -...|.+++++-.....
T Consensus 34 ~~~p~g~~~~v--~~qi~y~~~~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~ 111 (418)
T 4eue_A 34 DVHPYGCRREV--LNQIDYCKKAIGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNN 111 (418)
T ss_dssp CCCHHHHHHHH--HHHHHHHHHSCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHH
T ss_pred cCCCccHHHHH--HHHHHHHhccCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchH
Confidence 34566654432 23344444566555566778887777777773344 44449888777654322
Q ss_pred HHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHhC
Q 028372 105 MERRIVLRALGAEIILADSA-LRFEEILEKGEEILKKT 141 (210)
Q Consensus 105 ~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~ 141 (210)
....+.++..|.++..+..+ .+.++.....++..++.
T Consensus 112 ~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i~~~~ 149 (418)
T 4eue_A 112 IFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYIKDEF 149 (418)
T ss_dssp HHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 22233456778877766543 22444445556665554
No 298
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=75.92 E-value=15 Score=30.34 Aligned_cols=53 Identities=25% Similarity=0.238 Sum_probs=36.7
Q ss_pred CCC-CCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHH-HcCCEEEE
Q 028372 64 LIT-PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLR-ALGAEIIL 120 (210)
Q Consensus 64 ~~~-~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~-~~Ga~v~~ 120 (210)
.+. +|.+.+|.. +|.-|.+++..|+.+|.+++++.+. +.+++.++ .+|++.+.
T Consensus 183 ~~~~~g~~VlV~G-aG~vG~~~~q~a~~~Ga~Vi~~~~~---~~~~~~~~~~lGa~~v~ 237 (366)
T 1yqd_A 183 GLDEPGKHIGIVG-LGGLGHVAVKFAKAFGSKVTVISTS---PSKKEEALKNFGADSFL 237 (366)
T ss_dssp TCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC---GGGHHHHHHTSCCSEEE
T ss_pred CcCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHhcCCceEE
Confidence 355 776666655 6999999999999999976665542 34555544 78886543
No 299
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=75.90 E-value=17 Score=30.39 Aligned_cols=61 Identities=25% Similarity=0.346 Sum_probs=39.9
Q ss_pred HcCCCCCCCeEEEeeCC-CchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHH----HcCCEEEEEC
Q 028372 61 DKGLITPGKTTLIEVTS-GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD 122 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ss-GN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~v~ 122 (210)
+.|.++ |.+..+..-. +|.+.+++.+++.+|++++++.|+.- ++.-.+.++ ..|+++..+.
T Consensus 170 ~~g~l~-gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~ 237 (359)
T 2w37_A 170 NFGKLQ-GLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITD 237 (359)
T ss_dssp HHSCCT-TCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCcC-CeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 456544 3233333332 69999999999999999999999854 333333333 6677776664
No 300
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=75.87 E-value=26 Score=27.32 Aligned_cols=31 Identities=16% Similarity=0.248 Sum_probs=25.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv 99 (210)
+..+|+..+|.-|.++|..-...|.+++++.
T Consensus 10 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 40 (270)
T 1yde_A 10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICD 40 (270)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 4778898999999999988877787766654
No 301
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=75.84 E-value=17 Score=29.39 Aligned_cols=73 Identities=18% Similarity=0.181 Sum_probs=45.3
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCC--EEEEECCC-CCHHHHHHHHHHHHHhC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGA--EIILADSA-LRFEEILEKGEEILKKT 141 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga--~v~~v~~~-~~~~~~~~~a~~~~~~~ 141 (210)
+..+||..+|--|.++|..-...|.+++++...... ....+.++..|. ++..+..+ .+.++..+..++..+..
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 477889999999999999988999998777664322 222334444454 56555432 12344444455555543
No 302
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=75.74 E-value=13 Score=29.66 Aligned_cols=55 Identities=15% Similarity=0.091 Sum_probs=38.7
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC-C--CHHHHH---HHHHcCCEEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST-C--SMERRI---VLRALGAEIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~-~--~~~~~~---~~~~~Ga~v~~v~~ 123 (210)
++.+|+..+|+.|.+++..-...|.+++++.... . .+.+.+ .+...|.+++..+-
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~ 65 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEM 65 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCT
T ss_pred cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecC
Confidence 3578888899999999999888899999888764 2 123322 23445777766653
No 303
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=75.73 E-value=10 Score=29.37 Aligned_cols=55 Identities=24% Similarity=0.301 Sum_probs=39.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~~ 123 (210)
++.+|+..+|.-|.++|..-...|.+++++...+.. ....+.++..|.++..+..
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~ 78 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 78 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEe
Confidence 477888899999999999988899998887653221 1223445566887766654
No 304
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=75.73 E-value=16 Score=24.89 Aligned_cols=48 Identities=13% Similarity=0.136 Sum_probs=32.9
Q ss_pred EEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 72 vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
++....|..|..++......|.+++++-+ .+.+.+.++..|.+++..+
T Consensus 9 v~I~G~G~iG~~~a~~l~~~g~~v~~~d~---~~~~~~~~~~~~~~~~~~d 56 (144)
T 2hmt_A 9 FAVIGLGRFGGSIVKELHRMGHEVLAVDI---NEEKVNAYASYATHAVIAN 56 (144)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCEEEES---CHHHHHTTTTTCSEEEECC
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHhCCEEEEeC
Confidence 34444599999999999999999877644 3445555555677655444
No 305
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=75.56 E-value=15 Score=32.14 Aligned_cols=60 Identities=15% Similarity=0.080 Sum_probs=43.7
Q ss_pred CCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE-cCCC---------------CHHHHHHHHHcCCEEEEECCC
Q 028372 65 ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM-PSTC---------------SMERRIVLRALGAEIILADSA 124 (210)
Q Consensus 65 ~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv-p~~~---------------~~~~~~~~~~~Ga~v~~v~~~ 124 (210)
+++++..+||..+|--|.++|..-...|.+.++++ ..+. .....+.++..|+++..+..+
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~D 323 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCD 323 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECC
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECC
Confidence 44566778888888899999988778899877766 4432 234456677889998877654
No 306
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=75.54 E-value=24 Score=26.67 Aligned_cols=31 Identities=29% Similarity=0.351 Sum_probs=24.6
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+.+|+..+|.-|.++|..-...|.+++++..
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~ 33 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDGFALAIHYG 33 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 6688888899999999887778887766533
No 307
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=75.40 E-value=13 Score=30.55 Aligned_cols=55 Identities=25% Similarity=0.175 Sum_probs=37.9
Q ss_pred cCCCC-CCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHH-HcCCEEEE
Q 028372 62 KGLIT-PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLR-ALGAEIIL 120 (210)
Q Consensus 62 ~g~~~-~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~-~~Ga~v~~ 120 (210)
+..++ +|.+.+|.. +|.-|.+.+..|+.+|.+++++.+. +.+++.++ .+|++.+.
T Consensus 174 ~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~Vi~~~~~---~~~~~~~~~~lGa~~vi 230 (357)
T 2cf5_A 174 HFGLKQPGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSS---NKKREEALQDLGADDYV 230 (357)
T ss_dssp HTSTTSTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESS---TTHHHHHHTTSCCSCEE
T ss_pred hcCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeCC---hHHHHHHHHHcCCceee
Confidence 33455 776666665 6889999999999999976665543 34555555 78886443
No 308
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=75.33 E-value=28 Score=27.31 Aligned_cols=154 Identities=9% Similarity=0.071 Sum_probs=77.5
Q ss_pred hhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH--HHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372 47 VKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVG--LAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (210)
Q Consensus 47 ~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~a--lA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~ 124 (210)
|-.+....+-..+.+.|. ..++..+..+.... +.-.....++..++++|.......++.++..|--++.++..
T Consensus 41 ~~~~~~~gi~~~a~~~g~-----~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~~~ 115 (305)
T 3huu_A 41 FNSDVLNGINQACNVRGY-----STRMTVSENSGDLYHEVKTMIQSKSVDGFILLYSLKDDPIEHLLNEFKVPYLIVGKS 115 (305)
T ss_dssp HHHHHHHHHHHHHHHHTC-----EEEECCCSSHHHHHHHHHHHHHTTCCSEEEESSCBTTCHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHHHHHHHCCC-----EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCcCCcHHHHHHHHcCCCEEEECCC
Confidence 444445555555666664 33343333333222 22223445777777777655555566666777777776642
Q ss_pred C----------C-HHHHHHHHHHHHHhCC-CeEEcCCCCCChh---HHHHHHhH------------------HHHHHHhh
Q 028372 125 L----------R-FEEILEKGEEILKKTP-DGYLLRQFENPAN---PKIHYETT------------------GPEIWQDS 171 (210)
Q Consensus 125 ~----------~-~~~~~~~a~~~~~~~~-~~~~~~~~~n~~~---~~~g~~t~------------------~~Ei~~q~ 171 (210)
. + +......++.+.+... .-.|+....+... -..||... +.+.++++
T Consensus 116 ~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 195 (305)
T 3huu_A 116 LNYENIIHIDNDNIDAAYQLTQYLYHLGHRHILFLQESGHYAVTEDRSVGFKQYCDDVKISNDCVVIKSMNDLRDFIKQY 195 (305)
T ss_dssp CSSTTCCEEECCHHHHHHHHHHHHHHTTCCSEEEEEESSCBHHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHHHC---
T ss_pred CcccCCcEEEeCHHHHHHHHHHHHHHCCCCeEEEEcCCcccchhHHHHHHHHHHHHHcCCCcccEEecCcHHHHHHHHHh
Confidence 1 1 1222333333433321 2223322111111 01122111 33343333
Q ss_pred ----CCCCCEEEEccCchhHHHHHHHHHHhcC----CCCEEEEE
Q 028372 172 ----GGKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVVLR 207 (210)
Q Consensus 172 ----~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~----~~~~vigv 207 (210)
.++||+|||. +..++.|+..++++.+ .++.|+|+
T Consensus 196 ~l~~~~~~~ai~~~--nd~~A~g~~~al~~~g~~vP~di~vig~ 237 (305)
T 3huu_A 196 CIDASHMPSVIITS--DVMLNMQLLNVLYEYQLRIPEDIQTATF 237 (305)
T ss_dssp -----CCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEE
T ss_pred hhcCCCCCCEEEEC--ChHHHHHHHHHHHHcCCCCCcceEEEEE
Confidence 3579999974 6778889999999875 36888886
No 309
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=74.55 E-value=12 Score=28.91 Aligned_cols=71 Identities=14% Similarity=0.107 Sum_probs=43.7
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEECCCC-CHHHHHHHHHHHHH
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILADSAL-RFEEILEKGEEILK 139 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~~~~-~~~~~~~~a~~~~~ 139 (210)
+..+|+..+|.-|.++|..-...|.+++++...... ....+.++..|.++..+..+- +.++..+..++..+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDR 78 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 467888888999999999988899987776543211 122334455577777665432 23333444444433
No 310
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=73.85 E-value=26 Score=26.32 Aligned_cols=49 Identities=27% Similarity=0.269 Sum_probs=33.6
Q ss_pred EEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHH-HHcCCEEEEECC
Q 028372 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVL-RALGAEIILADS 123 (210)
Q Consensus 72 vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~-~~~Ga~v~~v~~ 123 (210)
++....|+.|..+|..-...|.+++++-. .+.+.+.+ +.+|.+++.-+.
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~l~~~~~~~~i~gd~ 52 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINK---DRELCEEFAKKLKATIIHGDG 52 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHHSSSEEEESCT
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEEC---CHHHHHHHHHHcCCeEEEcCC
Confidence 44456799999999999889999888753 34444444 345666655443
No 311
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=73.84 E-value=19 Score=28.26 Aligned_cols=54 Identities=19% Similarity=0.271 Sum_probs=38.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC---HHHHHH---HHHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS---MERRIV---LRALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~---~~~~~~---~~~~Ga~v~~v~ 122 (210)
++.+|+..+|+.|.+++......|.+++++...... +.+.+. +...|.+++..+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D 64 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 64 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEec
Confidence 367888899999999999988899999888765432 334332 234566665554
No 312
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=73.27 E-value=20 Score=31.07 Aligned_cols=60 Identities=32% Similarity=0.303 Sum_probs=42.1
Q ss_pred CCCCCeEEEeeCCCchHHHHHHHHHHcCCc-EEEEEcCCC----CHHHHHHHHHcCCEEEEECCC
Q 028372 65 ITPGKTTLIEVTSGNTGVGLAFIAAARGYN-LIIVMPSTC----SMERRIVLRALGAEIILADSA 124 (210)
Q Consensus 65 ~~~~~~~vv~~ssGN~g~alA~~a~~~g~~-~~vvvp~~~----~~~~~~~~~~~Ga~v~~v~~~ 124 (210)
+.++++.+|+..+|.-|.++|..-...|.+ ++++..... .....+.++..|+++..+..+
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~D 287 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACD 287 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeC
Confidence 445668899999999999999987788997 555444321 123345677889988877653
No 313
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=73.15 E-value=13 Score=29.28 Aligned_cols=55 Identities=16% Similarity=0.144 Sum_probs=43.6
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
|+..+||.+++--|.++|..-...|.++++.-. +......+.++..|.++..+..
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r-~~~~~~~~~~~~~g~~~~~~~~ 63 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAAR-RAPDETLDIIAKDGGNASALLI 63 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SCCHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeC-CcHHHHHHHHHHhCCcEEEEEc
Confidence 457889888899999999999999999877644 4456777888889988876654
No 314
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=72.91 E-value=34 Score=28.59 Aligned_cols=44 Identities=11% Similarity=0.132 Sum_probs=33.6
Q ss_pred chHHHHHHHHHHcCCcEEEEEcC-CC--CHHHHHHHH----HcCCEEEEEC
Q 028372 79 NTGVGLAFIAAARGYNLIIVMPS-TC--SMERRIVLR----ALGAEIILAD 122 (210)
Q Consensus 79 N~g~alA~~a~~~g~~~~vvvp~-~~--~~~~~~~~~----~~Ga~v~~v~ 122 (210)
|.+.+++.++.++|++++++.|+ .. ++.-.+.++ ..|+.+..+.
T Consensus 207 rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 257 (359)
T 1zq6_A 207 AVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSH 257 (359)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEEC
T ss_pred chHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 89999999999999999999998 43 333333333 6688887765
No 315
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=72.89 E-value=31 Score=26.86 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=26.7
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+++.+|+..+|--|.++|..-...|.+++++-..
T Consensus 14 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~ 47 (269)
T 3vtz_A 14 DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLD 47 (269)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4577888888888999988888888887776543
No 316
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=72.78 E-value=28 Score=26.19 Aligned_cols=32 Identities=25% Similarity=0.309 Sum_probs=25.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+..+|+..+|.-|.++|..-...|.+++++..
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 36788888899999999888888888776654
No 317
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=72.44 E-value=21 Score=31.24 Aligned_cols=60 Identities=28% Similarity=0.295 Sum_probs=42.2
Q ss_pred CCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-----CHHHHHHHHHcCCEEEEECCC
Q 028372 65 ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-----SMERRIVLRALGAEIILADSA 124 (210)
Q Consensus 65 ~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-----~~~~~~~~~~~Ga~v~~v~~~ 124 (210)
+.++++.+|+..+|..|.++|..-...|.+.++++..+. .....+.++..|+++..+..+
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~D 320 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACD 320 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeC
Confidence 445668899999999999999988888996444443322 123456677789988876543
No 318
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=72.43 E-value=32 Score=27.44 Aligned_cols=128 Identities=9% Similarity=-0.031 Sum_probs=68.2
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC--------------CC-----HHHHHHHHHcCC-EEEEECCCCCHH-
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST--------------CS-----MERRIVLRALGA-EIILADSALRFE- 128 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~--------------~~-----~~~~~~~~~~Ga-~v~~v~~~~~~~- 128 (210)
..|+...+.....+++-.+...++|++.+.... .+ ..-.+.+...|. +|..+..+..+.
T Consensus 74 ~~iig~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ia~i~~~~~~~~ 153 (358)
T 3hut_A 74 VGVLGDFSSTVSMAAGSIYGKEGMPQLSPTAAHPDYIKISPWQFRAITTPAFEGPNNAAWMIGDGFTSVAVIGVTTDWGL 153 (358)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGTTSCTTEEESSCCGGGHHHHHHHHHHHTTCCEEEEEEESSHHHH
T ss_pred EEEEcCCCcHHHHHHHHHHHHCCCcEEecCCCCcccccCCCeEEEecCChHHHHHHHHHHHHHcCCCEEEEEecCcHHHH
Confidence 556655565666677778888999987752110 01 112334444575 555554322222
Q ss_pred HHHHHHHHHHHhCCCeE----EcCCCCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEE
Q 028372 129 EILEKGEEILKKTPDGY----LLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKV 204 (210)
Q Consensus 129 ~~~~~a~~~~~~~~~~~----~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~v 204 (210)
+..+..++..++.+..+ ..... .... .....+|.+ .+||+||++ +.+..+.++.+.+++.+.++++
T Consensus 154 ~~~~~~~~~l~~~g~~v~~~~~~~~~-~~~~-----~~~~~~l~~---~~~d~i~~~-~~~~~a~~~~~~~~~~g~~~p~ 223 (358)
T 3hut_A 154 SSAQAFRKAFELRGGAVVVNEEVPPG-NRRF-----DDVIDEIED---EAPQAIYLA-MAYEDAAPFLRALRARGSALPV 223 (358)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECTT-CCCC-----HHHHHHHHH---HCCSEEEEE-SCHHHHHHHHHHHHHTTCCCCE
T ss_pred HHHHHHHHHHHHcCCEEEEEEecCCC-CccH-----HHHHHHHHh---cCCCEEEEc-cCchHHHHHHHHHHHcCCCCcE
Confidence 22333344444442221 11111 1111 122223332 358988876 5566888999999999888888
Q ss_pred EEE
Q 028372 205 VLR 207 (210)
Q Consensus 205 igv 207 (210)
++.
T Consensus 224 ~~~ 226 (358)
T 3hut_A 224 YGS 226 (358)
T ss_dssp EEC
T ss_pred Eec
Confidence 764
No 319
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=72.07 E-value=20 Score=29.05 Aligned_cols=52 Identities=25% Similarity=0.355 Sum_probs=36.9
Q ss_pred cCCCCCCCeEEEeeCCCchHHHHHHHHHHcCC-cEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372 62 KGLITPGKTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRALGAEII 119 (210)
Q Consensus 62 ~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~-~~~vvvp~~~~~~~~~~~~~~Ga~v~ 119 (210)
...+ +|.+.+|... |..|.+++..|+.+|. +++++.+ ++.+++.++.+ ++.+
T Consensus 160 ~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~l-a~~v 212 (343)
T 2dq4_A 160 GSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDP---NPYRLAFARPY-ADRL 212 (343)
T ss_dssp TTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---CHHHHGGGTTT-CSEE
T ss_pred hCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHh-HHhc
Confidence 5556 7767666666 9999999999999999 7776644 34555666666 5433
No 320
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=71.64 E-value=6.9 Score=30.56 Aligned_cols=34 Identities=32% Similarity=0.416 Sum_probs=28.4
Q ss_pred CCeEEEeeC----------------CCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 68 GKTTLIEVT----------------SGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 68 ~~~~vv~~s----------------sGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
|+..+||+. ||..|.++|.++...|.+++++..+
T Consensus 8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 346778877 6999999999999999999987544
No 321
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=71.11 E-value=16 Score=28.65 Aligned_cols=55 Identities=18% Similarity=0.203 Sum_probs=36.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCH-HHHHHHHHcCC-EEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSM-ERRIVLRALGA-EIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~-~~~~~~~~~Ga-~v~~v~~ 123 (210)
+..+|+..+|--|.++|......|.+++++....... ...+.++..|. ++..+..
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeC
Confidence 3778888889999999999888999887776542211 11233444454 5655543
No 322
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=71.08 E-value=15 Score=30.50 Aligned_cols=45 Identities=29% Similarity=0.416 Sum_probs=35.0
Q ss_pred CchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHH----HcCCEEEEEC
Q 028372 78 GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD 122 (210)
Q Consensus 78 GN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~v~ 122 (210)
.|.+.+++.+++.+|++++++.|+.- ++.-.+.++ ..|+++..+.
T Consensus 166 ~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 216 (333)
T 1duv_G 166 NNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTE 216 (333)
T ss_dssp SHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEES
T ss_pred cchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 59999999999999999999999854 333333333 7788887775
No 323
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=71.07 E-value=28 Score=27.24 Aligned_cols=54 Identities=22% Similarity=0.282 Sum_probs=39.6
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcC-CcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARG-YNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g-~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
++.+|+..+|+.|.+++......| .+++++....... ..+.+...|.+++..+-
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~-~~~~l~~~~~~~~~~D~ 60 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK-AAKELRLQGAEVVQGDQ 60 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSH-HHHHHHHTTCEEEECCT
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCH-HHHHHHHCCCEEEEecC
Confidence 367889999999999999887778 8998888754332 23344556777776654
No 324
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=70.59 E-value=17 Score=28.73 Aligned_cols=54 Identities=20% Similarity=0.306 Sum_probs=37.4
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHH---HHcCCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVL---RALGAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~---~~~Ga~v~~v~ 122 (210)
++.+|+..+|..|.+++......|.+++++...... +.+.+.+ ...|.+++..+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D 63 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS 63 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCC
Confidence 367888899999999999988889999888766432 3333332 33455555444
No 325
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=70.36 E-value=14 Score=29.40 Aligned_cols=25 Identities=28% Similarity=0.191 Sum_probs=19.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGY 93 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~ 93 (210)
+..+|+..+|.-|.++|..-...|.
T Consensus 34 k~~lVTGas~GIG~aia~~l~~~G~ 58 (287)
T 3rku_A 34 KTVLITGASAGIGKATALEYLEASN 58 (287)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHHT
T ss_pred CEEEEecCCChHHHHHHHHHHHcCC
Confidence 3778888888888888877665554
No 326
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=70.10 E-value=14 Score=30.55 Aligned_cols=45 Identities=27% Similarity=0.352 Sum_probs=34.7
Q ss_pred CchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHH----HcCCEEEEEC
Q 028372 78 GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD 122 (210)
Q Consensus 78 GN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~v~ 122 (210)
.|.+.+++.+++.+|++++++.|+.- ++.-.+.++ ..|+++..+.
T Consensus 166 ~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 216 (335)
T 1dxh_A 166 NNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTE 216 (335)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred cchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 59999999999999999999999854 333333333 6788887765
No 327
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=70.05 E-value=32 Score=26.66 Aligned_cols=47 Identities=11% Similarity=0.146 Sum_probs=34.2
Q ss_pred HHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC--CCCEEEEE
Q 028372 157 KIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN--PDIKVVLR 207 (210)
Q Consensus 157 ~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~--~~~~vigv 207 (210)
..++. ...+++++- ++||+|||. +..++.|+..++++.+ .++.|+|+
T Consensus 178 ~~~~~-~~~~ll~~~-~~~~ai~~~--nD~~A~g~~~al~~~G~~~dv~vvGf 226 (288)
T 1gud_A 178 IKALD-VATNVLQRN-PNIKAIYCA--NDTMAMGVAQAVANAGKTGKVLVVGT 226 (288)
T ss_dssp HHHHH-HHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHTTCTTTSEEEEE
T ss_pred HHHHH-HHHHHHHhC-CCceEEEEC--CCchHHHHHHHHHhcCCCCCeEEEEe
Confidence 34443 445666654 569999986 6678889999999875 36899986
No 328
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=69.68 E-value=41 Score=26.90 Aligned_cols=42 Identities=14% Similarity=0.067 Sum_probs=31.1
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC----CCEEEEE
Q 028372 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP----DIKVVLR 207 (210)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~----~~~vigv 207 (210)
...+++++- +++|+||+. +...+.|+..++++.+- ++.|+|+
T Consensus 195 ~~~~~L~~~-~~~~aI~~~--~d~~a~g~~~al~~~G~~vP~di~vvg~ 240 (350)
T 3h75_A 195 QAQQLLKRY-PKTQLVWSA--NDEMALGAMQAARELGRKPGTDLLFSGV 240 (350)
T ss_dssp HHHHHHHHC-TTEEEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEEEE
T ss_pred HHHHHHHhC-CCcCEEEEC--ChHHHHHHHHHHHHcCCCCCCCeEEEec
Confidence 445666554 568998875 66778899999998762 6888886
No 329
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=69.63 E-value=34 Score=25.96 Aligned_cols=43 Identities=16% Similarity=0.157 Sum_probs=32.6
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC---CCCEEEEE
Q 028372 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN---PDIKVVLR 207 (210)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~---~~~~vigv 207 (210)
...+++++-+.+||+||+. +..++.|+..++++.+ .++.|+|+
T Consensus 169 ~~~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~g~vp~di~vvg~ 214 (272)
T 3o74_A 169 LMQQLIDDLGGLPDALVTT--SYVLLQGVFDTLQARPVDSRQLQLGTF 214 (272)
T ss_dssp HHHHHHHHHTSCCSEEEES--SHHHHHHHHHHHHTSCGGGCCCEEEEE
T ss_pred HHHHHHhcCCCCCcEEEEe--CchHHHHHHHHHHHcCCCccceEEEEe
Confidence 4456666652269999985 6778889999999887 47889886
No 330
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=69.36 E-value=26 Score=27.07 Aligned_cols=72 Identities=21% Similarity=0.110 Sum_probs=43.6
Q ss_pred CeEEEeeCC--CchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHH-cCC-EEEEECCCCCHHHHHHHHHHHHHhC
Q 028372 69 KTTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRA-LGA-EIILADSALRFEEILEKGEEILKKT 141 (210)
Q Consensus 69 ~~~vv~~ss--GN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~-~Ga-~v~~v~~~~~~~~~~~~a~~~~~~~ 141 (210)
+..+|+..+ |.-|.++|..-...|.+++++..........+.+.. .|. .++.++-. +.++..+..++..++.
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVA-EDASIDTMFAELGKVW 85 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCC-CHHHHHHHHHHHHHHc
Confidence 467888877 889999999988899998887655433344444433 332 34444432 2344444455554443
No 331
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=68.52 E-value=20 Score=27.60 Aligned_cols=50 Identities=12% Similarity=0.133 Sum_probs=35.6
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
+..+|+..+|--|.++|..-...|.+++++.... . +..+.++.++..+..
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--~---~~~~~~~~~~~~~~~ 59 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG--E---DVVADLGDRARFAAA 59 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC--H---HHHHHTCTTEEEEEC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch--H---HHHHhcCCceEEEEC
Confidence 4678888889999999999888899988775521 2 223445766666554
No 332
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=68.51 E-value=40 Score=26.23 Aligned_cols=42 Identities=12% Similarity=0.091 Sum_probs=31.3
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCCEEEEE
Q 028372 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVVLR 207 (210)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~----~~~~vigv 207 (210)
...+++++- ++||+|||. +..++.|+..++++.+ .++.|+|+
T Consensus 177 ~~~~~l~~~-~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~ 222 (294)
T 3qk7_A 177 AASRLLALE-VPPTAIITD--CNMLGDGVASALDKAGLLGGEGISLIAY 222 (294)
T ss_dssp HHHHHHHSS-SCCSEEEES--SHHHHHHHHHHHHHTTCSSTTSCEEEEE
T ss_pred HHHHHHcCC-CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEee
Confidence 344555543 579999985 6778889999999876 36888886
No 333
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=68.46 E-value=51 Score=27.53 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=23.6
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
++|....+|..|+.++.+++.+|++++++-+.
T Consensus 20 ~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~ 51 (433)
T 2dwc_A 20 QKILLLGSGELGKEIAIEAQRLGVEVVAVDRY 51 (433)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 34555566778888888888888888777654
No 334
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=68.26 E-value=15 Score=27.34 Aligned_cols=50 Identities=12% Similarity=0.178 Sum_probs=35.9
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
+.+|+..+|..|.+++......|.+++++... ..+...+...+.+++..+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~---~~~~~~~~~~~~~~~~~D 51 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD---PQKAADRLGATVATLVKE 51 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHTCTTSEEEECC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec---ccccccccCCCceEEecc
Confidence 46888999999999999998899999998764 333333333455555544
No 335
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=68.20 E-value=33 Score=25.20 Aligned_cols=49 Identities=16% Similarity=0.165 Sum_probs=36.5
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
+.+|+..+|.-|.+++......|.+++++.... .+...+. .+.+++..+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~---~~~~~~~-~~~~~~~~D 50 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA---GKITQTH-KDINILQKD 50 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS---HHHHHHC-SSSEEEECC
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc---hhhhhcc-CCCeEEecc
Confidence 468888999999999999999999999887753 2333332 566766665
No 336
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=67.80 E-value=26 Score=27.11 Aligned_cols=71 Identities=18% Similarity=0.133 Sum_probs=42.1
Q ss_pred CeEEEeeCC--CchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHH-cC-CEEEEECCCCCHHHHHHHHHHHHHh
Q 028372 69 KTTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRA-LG-AEIILADSALRFEEILEKGEEILKK 140 (210)
Q Consensus 69 ~~~vv~~ss--GN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~-~G-a~v~~v~~~~~~~~~~~~a~~~~~~ 140 (210)
+..+|+..+ |.-|.++|..-...|.+++++..........+.+.. .| ...+.++-. +.++..+..++..++
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~ 83 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVT-QDEELDALFAGVKEA 83 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHHHHHHH
Confidence 467888877 889999999888889998877654322234444433 34 344444533 234444444444443
No 337
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=67.10 E-value=18 Score=29.11 Aligned_cols=51 Identities=12% Similarity=0.113 Sum_probs=34.6
Q ss_pred EEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~ 122 (210)
.++..++|..+..++..+- ..-.-.|+++...-......++..|++++.++
T Consensus 71 ~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~ 121 (371)
T 2e7j_A 71 VARVTNGAREAKFAVMHSL-AKKDAWVVMDENCHYSSYVAAERAGLNIALVP 121 (371)
T ss_dssp EEEEESSHHHHHHHHHHHH-CCTTCEEEEETTCCHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeCChHHHHHHHHHHH-hCCCCEEEEccCcchHHHHHHHHcCCeEEEee
Confidence 4666666677776666654 33234566666666666666889999999998
No 338
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=66.96 E-value=31 Score=27.84 Aligned_cols=104 Identities=21% Similarity=0.206 Sum_probs=64.3
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (210)
++|..-..|+.|.++|..++.+|++++++-+.. .. .....+|++. + +.++ +.++. +...+.-
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~-~~---~~~~~~g~~~--~----~l~e-------ll~~a-DvV~l~~ 204 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYP-NE---ERAKEVNGKF--V----DLET-------LLKES-DVVTIHV 204 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-CH---HHHHHTTCEE--C----CHHH-------HHHHC-SEEEECC
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCC-Ch---hhHhhcCccc--c----CHHH-------HHhhC-CEEEEec
Confidence 456677889999999999999999987665433 22 2345678753 1 1322 23333 4444432
Q ss_pred CCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHH--HHHHHHHHh
Q 028372 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV--TGAGRFLKE 197 (210)
Q Consensus 150 ~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~--~Gi~~~~k~ 197 (210)
..++.. . ..+..+.++++ +++.+++-+|+|+.. ..+..++++
T Consensus 205 p~~~~t--~--~li~~~~l~~m--k~ga~lin~arg~~vd~~aL~~aL~~ 248 (307)
T 1wwk_A 205 PLVEST--Y--HLINEERLKLM--KKTAILINTSRGPVVDTNALVKALKE 248 (307)
T ss_dssp CCSTTT--T--TCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCChHH--h--hhcCHHHHhcC--CCCeEEEECCCCcccCHHHHHHHHHh
Confidence 222221 1 12334667776 468899999999864 477777765
No 339
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=66.84 E-value=43 Score=26.02 Aligned_cols=44 Identities=9% Similarity=0.020 Sum_probs=32.3
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-----CCCEEEEEE
Q 028372 162 TTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN-----PDIKVVLRV 208 (210)
Q Consensus 162 t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~-----~~~~vigv~ 208 (210)
....+++++- +++|+||+. +..++.|+..++++.+ .++.|+|+-
T Consensus 177 ~~~~~~l~~~-~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~~dv~vig~D 225 (297)
T 3rot_A 177 SRVKSYFKIH-PETNIIFCL--TSQALDPLGQMLLHPDRYDFNYQPQVYSFD 225 (297)
T ss_dssp HHHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHSHHHHTCCCCCEEEEEC
T ss_pred HHHHHHHHhC-CCCCEEEEc--CCcchHHHHHHHHhcCCccCCCceEEEEeC
Confidence 3445666554 678999975 5677889999998875 379999863
No 340
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=66.81 E-value=26 Score=29.79 Aligned_cols=73 Identities=22% Similarity=0.072 Sum_probs=46.8
Q ss_pred CeEEEeeCCCchHHHHHHHHH-HcCCcEEEEEcCCCCH-------------HHHHHHHHcCCEEEEECCCCCHHH-HHHH
Q 028372 69 KTTLIEVTSGNTGVGLAFIAA-ARGYNLIIVMPSTCSM-------------ERRIVLRALGAEIILADSALRFEE-ILEK 133 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~-~~g~~~~vvvp~~~~~-------------~~~~~~~~~Ga~v~~v~~~~~~~~-~~~~ 133 (210)
++.+|+..|...|+|.|.+.+ ..|-.++++.-+..+. ...+.++..|.+.+.+..+-.-++ ..+.
T Consensus 51 K~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~v 130 (401)
T 4ggo_A 51 KNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQV 130 (401)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHH
Confidence 477888888888888887755 6798888877543321 234667888888887765432233 3344
Q ss_pred HHHHHHhC
Q 028372 134 GEEILKKT 141 (210)
Q Consensus 134 a~~~~~~~ 141 (210)
..++.++.
T Consensus 131 i~~i~~~~ 138 (401)
T 4ggo_A 131 IEEAKKKG 138 (401)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhc
Confidence 45555543
No 341
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=66.46 E-value=44 Score=25.98 Aligned_cols=43 Identities=16% Similarity=-0.061 Sum_probs=31.7
Q ss_pred HHHHHHHhhC--CCCCEEEEccCchhHHHHHHHHHHhcC----CCCEEEEE
Q 028372 163 TGPEIWQDSG--GKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVVLR 207 (210)
Q Consensus 163 ~~~Ei~~q~~--~~~d~vv~pvG~Gg~~~Gi~~~~k~~~----~~~~vigv 207 (210)
...+++++.+ +.||+||+ .+..++.|+..++++.+ .++.|+|+
T Consensus 179 ~~~~~l~~~~~~~~~~ai~~--~~d~~A~g~~~al~~~g~~vP~di~vig~ 227 (295)
T 3hcw_A 179 YMQNLHTRLKDPNIKQAIIS--LDAMLHLAILSVLYELNIEIPKDVMTATF 227 (295)
T ss_dssp HHHHHHHHHTCTTSCEEEEE--SSHHHHHHHHHHHHHTTCCTTTTEEEEEE
T ss_pred HHHHHHhhcccCCCCcEEEE--CChHHHHHHHHHHHHcCCCCCCceEEEEe
Confidence 4456666553 36899986 46778899999999876 36888886
No 342
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=65.96 E-value=11 Score=30.79 Aligned_cols=59 Identities=14% Similarity=0.015 Sum_probs=41.1
Q ss_pred HcCCCCCCCeEEEeeCC--CchHHHHHHHHHHc-CCcEEEEEcCCC-CHHHHHHHHHcCCEEEEEC
Q 028372 61 DKGLITPGKTTLIEVTS--GNTGVGLAFIAAAR-GYNLIIVMPSTC-SMERRIVLRALGAEIILAD 122 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ss--GN~g~alA~~a~~~-g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~ 122 (210)
+.|.++ |.+..+..-. +|.+.+++.++.++ |++++++.|+.- ++..+ ++..|+++..+.
T Consensus 143 ~~g~l~-gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~--~~~~g~~~~~~~ 205 (299)
T 1pg5_A 143 HFNTID-GLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEI--LDELNYPVKEVE 205 (299)
T ss_dssp HHSCST-TCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHH--HTTCCSCEEEES
T ss_pred HhCCcC-CcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHH--HHHcCCeEEEeC
Confidence 456554 3343333433 79999999999999 999999999865 33332 567788876665
No 343
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=65.65 E-value=5.4 Score=32.81 Aligned_cols=27 Identities=26% Similarity=0.395 Sum_probs=23.9
Q ss_pred CCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372 76 TSGNTGVGLAFIAAARGYNLIIVMPST 102 (210)
Q Consensus 76 ssGN~g~alA~~a~~~g~~~~vvvp~~ 102 (210)
|||..|.++|-++...|..++++..+.
T Consensus 63 SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 63 SSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 558899999999999999999998653
No 344
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=65.63 E-value=24 Score=29.26 Aligned_cols=53 Identities=15% Similarity=0.249 Sum_probs=36.4
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHH----HHHcCCEEEEEC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIV----LRALGAEIILAD 122 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~----~~~~Ga~v~~v~ 122 (210)
+..+..-.+|.+.+++.+++.+|.+++++.|+.- ++.-++. .+..|+++..+.
T Consensus 177 kva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 235 (339)
T 4a8t_A 177 KVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTD 235 (339)
T ss_dssp EEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEEC
T ss_pred EEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEC
Confidence 4444444589999999999999999999999864 2322222 244576666554
No 345
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=65.24 E-value=28 Score=27.86 Aligned_cols=32 Identities=16% Similarity=0.245 Sum_probs=27.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++.+|+..+|.-|.+++......|.+++++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 34 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN 34 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEec
Confidence 46788889999999999988888999888764
No 346
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=65.01 E-value=29 Score=28.94 Aligned_cols=46 Identities=17% Similarity=0.139 Sum_probs=32.4
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHH-HHHHcCCEE
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRI-VLRALGAEI 118 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~-~~~~~Ga~v 118 (210)
++|+....||.|..+|.....+|.+++ +.+. ...+++ ..+.+|++.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVv-v~D~--~~~~l~~~a~~~ga~~ 220 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLV-VTDV--NKAAVSAAVAEEGADA 220 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEE-EECS--CHHHHHHHHHHHCCEE
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEE-EEcC--CHHHHHHHHHHcCCEE
Confidence 567777889999999999999999866 4443 344443 334457654
No 347
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=64.91 E-value=25 Score=28.20 Aligned_cols=82 Identities=15% Similarity=0.068 Sum_probs=45.6
Q ss_pred EEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC-CCCHHHHHHHHHHHHHhCCCeEEcCC
Q 028372 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS-ALRFEEILEKGEEILKKTPDGYLLRQ 149 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (210)
.++..++|..+..++..+- .+-.-.++++...-..-...++..|++++.++. +.++ -..+..++..+.....+++..
T Consensus 84 ~v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~~~~~v~~~~ 161 (365)
T 3get_A 84 NIIIGAGSDQVIEFAIHSK-LNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHKDEIKLIFLCL 161 (365)
T ss_dssp GEEEESSHHHHHHHHHHHH-CCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTTTTEEEEEEES
T ss_pred eEEECCCHHHHHHHHHHHH-hCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhCCCCCEEEEcC
Confidence 4676777777776665543 222234555554445556677889999999985 3333 222333333333335666643
Q ss_pred CCCCh
Q 028372 150 FENPA 154 (210)
Q Consensus 150 ~~n~~ 154 (210)
..||.
T Consensus 162 p~npt 166 (365)
T 3get_A 162 PNNPL 166 (365)
T ss_dssp SCTTT
T ss_pred CCCCC
Confidence 34543
No 348
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=64.88 E-value=30 Score=32.02 Aligned_cols=59 Identities=24% Similarity=0.302 Sum_probs=41.7
Q ss_pred CCCCeEEEeeCCCchHHHHHHHHH-HcCCcEEEEEcCC---C--CHHHHHHHHHcCCEEEEECCC
Q 028372 66 TPGKTTLIEVTSGNTGVGLAFIAA-ARGYNLIIVMPST---C--SMERRIVLRALGAEIILADSA 124 (210)
Q Consensus 66 ~~~~~~vv~~ssGN~g~alA~~a~-~~g~~~~vvvp~~---~--~~~~~~~~~~~Ga~v~~v~~~ 124 (210)
.+++..+|+..+|-.|.++|..-. ..|.+.++++..+ . .....+.++..|+++..+..+
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~D 592 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACD 592 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEee
Confidence 345567888888888999888765 7899855655543 2 234566778889998877653
No 349
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=64.76 E-value=29 Score=26.33 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=28.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+|.-|.++|..-...|.+++++...
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 477899999999999999988899998877653
No 350
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=64.39 E-value=52 Score=26.10 Aligned_cols=47 Identities=17% Similarity=0.171 Sum_probs=33.6
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~ 119 (210)
+++..-..|+.|.++|..++.+|.+++++-+. ..+.+.++.+|++++
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~---~~~~~~~~~~g~~~~ 202 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARE---SDLLARIAEMGMEPF 202 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTSEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC---HHHHHHHHHCCCeec
Confidence 45666778999999999999999987766443 233444456777643
No 351
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=64.32 E-value=20 Score=27.27 Aligned_cols=50 Identities=26% Similarity=0.302 Sum_probs=35.6
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
++.+|+..+|.-|.++|..-...|.+++++..... . . .+.+|...+.++-
T Consensus 3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~-~-~---~~~~~~~~~~~D~ 52 (239)
T 2ekp_A 3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE-E-A---AQSLGAVPLPTDL 52 (239)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH-H-H---HHHHTCEEEECCT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-H-H---HHhhCcEEEecCC
Confidence 46789999999999999998889999877755431 1 1 2223666666664
No 352
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=64.12 E-value=26 Score=29.29 Aligned_cols=34 Identities=15% Similarity=0.218 Sum_probs=28.0
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC 103 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~ 103 (210)
+..+..-.+|.+.+++.++..+|++++++.|+.-
T Consensus 155 kva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~ 188 (355)
T 4a8p_A 155 KVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGF 188 (355)
T ss_dssp EEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred EEEEECCCchhHHHHHHHHHHcCCEEEEECCCcc
Confidence 4444444589999999999999999999999864
No 353
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=63.95 E-value=49 Score=28.54 Aligned_cols=52 Identities=12% Similarity=-0.111 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 49 DRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 49 ~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
-++..+.+..+.+........++|+.-..||-|..+|.....+|-+++.+.+
T Consensus 215 g~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD 266 (450)
T 4fcc_A 215 GYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASD 266 (450)
T ss_dssp HHHHHHHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred eeeHHHHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEec
Confidence 4567777776654332333346788889999999999999999999987654
No 354
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=63.94 E-value=54 Score=26.82 Aligned_cols=32 Identities=25% Similarity=0.272 Sum_probs=24.7
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
++|...++|..|+.++.+++.+|++++++-+.
T Consensus 12 ~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~ 43 (391)
T 1kjq_A 12 TRVMLLGSGELGKEVAIECQRLGVEVIAVDRY 43 (391)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 44565677888889999999999988777653
No 355
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=63.68 E-value=29 Score=26.69 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=27.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+|.-|.++|..-...|.+++++...
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRN 40 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 477899999999999999988899988777553
No 356
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=63.67 E-value=34 Score=26.62 Aligned_cols=67 Identities=13% Similarity=0.191 Sum_probs=41.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCC-CHHHHHHHHHHH
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSAL-RFEEILEKGEEI 137 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~-~~~~~~~~a~~~ 137 (210)
+..+|+..+|--|.++|..-...|.+++++-... ....+..+.++.++..+..+- +.++..+..++.
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 98 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAA--EKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA 98 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh--HHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence 3678888889999999999888999877764432 122223344576666555432 234444444444
No 357
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=63.56 E-value=17 Score=27.52 Aligned_cols=52 Identities=10% Similarity=0.150 Sum_probs=34.7
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHHc-CCEEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARG--YNLIIVMPSTCSMERRIVLRAL-GAEIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g--~~~~vvvp~~~~~~~~~~~~~~-Ga~v~~v~~ 123 (210)
++.+|+..+|.-|.++|......| .+++++....... +.++.. +.++..+..
T Consensus 4 k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~---~~l~~~~~~~~~~~~~ 58 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA---TELKSIKDSRVHVLPL 58 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC---HHHHTCCCTTEEEEEC
T ss_pred CEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHH---HHHHhccCCceEEEEe
Confidence 467888888999999999888889 8888776543222 223333 555555443
No 358
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=63.49 E-value=37 Score=26.68 Aligned_cols=55 Identities=18% Similarity=0.233 Sum_probs=38.3
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~ 124 (210)
++..+|+..+|--|.++|..-...|.+++++.... ....+..+.++.++..+..+
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D 70 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDT--RKGEAAARTMAGQVEVRELD 70 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHTTSSSEEEEEECC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHhcCCeeEEEcC
Confidence 34778999999999999999888999877765432 22223334557777776643
No 359
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=63.47 E-value=17 Score=30.69 Aligned_cols=48 Identities=17% Similarity=0.227 Sum_probs=34.9
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~ 120 (210)
.+|+....|+.|.+.+..++.+|.+++++ +. .+.+.+.++.+|++.+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~-D~--~~~~~~~~~~lGa~~~~ 220 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAF-DT--RPEVKEQVQSMGAEFLE 220 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE-CS--CGGGHHHHHHTTCEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEE-cC--CHHHHHHHHHcCCEEEE
Confidence 34666678999999999999999865544 22 34455566788998653
No 360
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=63.37 E-value=50 Score=25.57 Aligned_cols=45 Identities=16% Similarity=0.041 Sum_probs=31.7
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC---CCEEEEE
Q 028372 162 TTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP---DIKVVLR 207 (210)
Q Consensus 162 t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~---~~~vigv 207 (210)
....+++++- +++|++++-+.+-.++.|+..++++.+- ++.|+|+
T Consensus 184 ~~~~~~l~~~-~~~~a~~i~~~nD~~A~g~~~al~~~g~~v~di~vvG~ 231 (306)
T 8abp_A 184 DAANSMLVQH-PEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGI 231 (306)
T ss_dssp HHHHHHHTTC-TTCSEEEEECSSHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred HHHHHHHHhC-CCCceEEEEeCCcHHHHHHHHHHHHcCCCCCceEEEEe
Confidence 3445666554 5789844445677788899999998864 6788875
No 361
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=63.32 E-value=27 Score=28.67 Aligned_cols=61 Identities=16% Similarity=0.141 Sum_probs=40.6
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHH----HcCCEEEEEC
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD 122 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~v~ 122 (210)
+.|.++ |.+..+..-..|.+.+++.++..+|.+++++.|+.- ++.-.+.++ ..|+++..+.
T Consensus 149 ~~g~l~-gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 215 (321)
T 1oth_A 149 HYSSLK-GLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTN 215 (321)
T ss_dssp HHSCCT-TCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCcC-CcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 456544 334333333457999999999999999999999865 333333333 4677777665
No 362
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=62.76 E-value=31 Score=26.66 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=31.0
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCCEEEEE
Q 028372 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVVLR 207 (210)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~-~~~~vigv 207 (210)
...+++++- ++||+||+. +..++.|+..++++.+ .++.|+|+
T Consensus 181 ~~~~ll~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~dv~vig~ 223 (290)
T 2fn9_A 181 VTEQILQAH-PEIKAIWCG--NDAMALGAMKACEAAGRTDIYIFGF 223 (290)
T ss_dssp HHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHTTCTTCEEECC
T ss_pred HHHHHHHhC-CCCcEEEEC--CchHHHHHHHHHHHCCCCCeEEEEe
Confidence 345566553 569999975 5677889999999876 47888875
No 363
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=62.29 E-value=15 Score=30.78 Aligned_cols=47 Identities=15% Similarity=0.213 Sum_probs=33.7
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~ 119 (210)
.+|+....|..|.+.+..++.+|.+++++ ..+ +.+.+.++.+|++++
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~-d~~--~~~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMAT-DVR--AATKEQVESLGGKFI 219 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE-CSC--STTHHHHHHTTCEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEE-eCC--HHHHHHHHHcCCeEE
Confidence 44666678999999999999999974443 322 334455667999865
No 364
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=62.26 E-value=60 Score=26.08 Aligned_cols=30 Identities=23% Similarity=0.377 Sum_probs=23.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIV 98 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vv 98 (210)
+..+|+..+|.-|.++|..-...|.++++.
T Consensus 10 k~~lVTGas~GIG~~~a~~La~~Ga~Vv~~ 39 (319)
T 1gz6_A 10 RVVLVTGAGGGLGRAYALAFAERGALVVVN 39 (319)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 467888888888888888777778776654
No 365
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=62.25 E-value=19 Score=28.77 Aligned_cols=54 Identities=13% Similarity=0.187 Sum_probs=34.1
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~ 124 (210)
..++..++|..+..++..+-. +-.-.++++...-..-...++..|++++.++.+
T Consensus 69 ~~i~~~~g~~~a~~~~~~~l~-~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 122 (354)
T 3ly1_A 69 PSILLTAGSSEGIRAAIEAYA-SLEAQLVIPELTYGDGEHFAKIAGMKVTKVKML 122 (354)
T ss_dssp GGEEEESHHHHHHHHHHHHHC-CTTCEEEEESSSCTHHHHHHHHTTCEEEEECCC
T ss_pred HHEEEeCChHHHHHHHHHHHh-CCCCeEEECCCCchHHHHHHHHcCCEEEEecCC
Confidence 346667777777776665542 222234444444445566778899999999854
No 366
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=62.18 E-value=52 Score=25.34 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=26.5
Q ss_pred CCCCEEEEccCchhHHHHHHHHHHhcC----CCCEEEEE
Q 028372 173 GKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVVLR 207 (210)
Q Consensus 173 ~~~d~vv~pvG~Gg~~~Gi~~~~k~~~----~~~~vigv 207 (210)
++||+||+ .+..++.|+..++++.+ .++.|+|+
T Consensus 185 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vvg~ 221 (291)
T 3egc_A 185 DRPTALLT--SSHRITEGAMQALNVLGLRYGPDVEIVSF 221 (291)
T ss_dssp CCCSEEEE--SSHHHHHHHHHHHHHHTCCBTTTBEEEEE
T ss_pred CCCcEEEE--CCcHHHHHHHHHHHHcCCCCCCceEEEEe
Confidence 56899997 46677889999999875 36888886
No 367
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=61.66 E-value=18 Score=29.32 Aligned_cols=82 Identities=20% Similarity=0.171 Sum_probs=41.4
Q ss_pred EEEeeCCCchHHHHHHHHHH-cCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHH-HHHHHHHHHHHhCCCeEEcC
Q 028372 71 TLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFE-EILEKGEEILKKTPDGYLLR 148 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~-~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~-~~~~~a~~~~~~~~~~~~~~ 148 (210)
.|+..++|..+..++..+-. -| + .++++...-..-...++..|++++.++.+.++. +.....+.+.+.....+++.
T Consensus 94 ~v~~~~G~~~al~~~~~~l~~~g-d-~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 171 (369)
T 3cq5_A 94 NLWAANGSNEILQQLLQAFGGPG-R-TALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVT 171 (369)
T ss_dssp GEEEESHHHHHHHHHHHHHCSTT-C-EEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEE
T ss_pred hEEECCChHHHHHHHHHHhcCCC-C-EEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEe
Confidence 46666666676655554432 23 2 333333333344556788999999887543211 11111122222144677775
Q ss_pred CCCCCh
Q 028372 149 QFENPA 154 (210)
Q Consensus 149 ~~~n~~ 154 (210)
...||.
T Consensus 172 ~~~npt 177 (369)
T 3cq5_A 172 TPNNPT 177 (369)
T ss_dssp SSCTTT
T ss_pred CCCCCC
Confidence 545553
No 368
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=61.56 E-value=49 Score=28.75 Aligned_cols=56 Identities=21% Similarity=0.288 Sum_probs=40.9
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-----CHHHHHHHHHcCCEEEEECCC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-----SMERRIVLRALGAEIILADSA 124 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-----~~~~~~~~~~~Ga~v~~v~~~ 124 (210)
++.+|+..+|--|.++|..-...|.+.++++..+. .....+.++..|+++..+..+
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~D 300 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACD 300 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEcc
Confidence 57788888899999999888888996555554321 234456778899999877653
No 369
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=61.32 E-value=26 Score=26.07 Aligned_cols=32 Identities=9% Similarity=-0.014 Sum_probs=27.5
Q ss_pred eEEEeeCCCchHHHHHHHHH-HcCCcEEEEEcC
Q 028372 70 TTLIEVTSGNTGVGLAFIAA-ARGYNLIIVMPS 101 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~-~~g~~~~vvvp~ 101 (210)
+.+|+..+|..|.+++.... ..|.+++++...
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC
Confidence 46888889999999999987 899998888764
No 370
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=61.17 E-value=20 Score=28.94 Aligned_cols=55 Identities=16% Similarity=0.039 Sum_probs=35.1
Q ss_pred eEEEeeCCCchHHHHHHHHHHcC------------CcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARG------------YNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g------------~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~ 124 (210)
..++..++|..+..++..+.... -.-.|+++...-..-...++.+|++++.++.+
T Consensus 87 ~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 153 (397)
T 3f9t_A 87 AYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIK 153 (397)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBC
T ss_pred CCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeC
Confidence 34666777777776666543221 12345555555555667778889999999854
No 371
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=61.08 E-value=50 Score=26.68 Aligned_cols=104 Identities=19% Similarity=0.161 Sum_probs=63.5
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (210)
+++..-..|+.|.++|..++.+|++++++-+.. ... ..+.+|++. + +.++ +.++. +...+.-
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~-~~~---~~~~~g~~~--~----~l~e-------ll~~a-DvVvl~~ 204 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMGMKVLAYDILD-IRE---KAEKINAKA--V----SLEE-------LLKNS-DVISLHV 204 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSC-CHH---HHHHTTCEE--C----CHHH-------HHHHC-SEEEECC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCc-chh---HHHhcCcee--c----CHHH-------HHhhC-CEEEEec
Confidence 456667889999999999999999987764433 222 245678763 1 2332 22333 4444432
Q ss_pred CCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHHH--HHHHHHHh
Q 028372 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVT--GAGRFLKE 197 (210)
Q Consensus 150 ~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~--Gi~~~~k~ 197 (210)
..++.. . ..+..+.++++ +++.+++-+|+|+..- .+..++++
T Consensus 205 P~~~~t--~--~li~~~~l~~m--k~ga~lIn~arg~~vd~~aL~~aL~~ 248 (313)
T 2ekl_A 205 TVSKDA--K--PIIDYPQFELM--KDNVIIVNTSRAVAVNGKALLDYIKK 248 (313)
T ss_dssp CCCTTS--C--CSBCHHHHHHS--CTTEEEEESSCGGGBCHHHHHHHHHT
T ss_pred cCChHH--H--HhhCHHHHhcC--CCCCEEEECCCCcccCHHHHHHHHHc
Confidence 222221 0 11224566666 4689999999998654 66666654
No 372
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=60.88 E-value=15 Score=28.30 Aligned_cols=33 Identities=12% Similarity=0.122 Sum_probs=27.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+..+|+..+|.-|.++|..-...|.+++++...
T Consensus 8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 477899999999999999988899988777553
No 373
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=60.34 E-value=9 Score=31.10 Aligned_cols=28 Identities=25% Similarity=0.322 Sum_probs=25.9
Q ss_pred EEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372 72 LIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (210)
Q Consensus 72 vv~~ssGN~g~alA~~a~~~g~~~~vvv 99 (210)
|+...+|-.|.++|+..++.|++++++=
T Consensus 7 ViIVGaGpaGl~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKYGLKTLMIE 34 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEe
Confidence 7778999999999999999999999884
No 374
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=60.11 E-value=13 Score=30.43 Aligned_cols=32 Identities=19% Similarity=0.318 Sum_probs=26.7
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
++|..-.+|-.|..++++|+.+|++++++-+.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~ 33 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKN 33 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34666678899999999999999999988643
No 375
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=60.09 E-value=56 Score=25.06 Aligned_cols=33 Identities=15% Similarity=0.081 Sum_probs=26.7
Q ss_pred CCCCEEEEccCchhHHHHHHHHHHhcC----CCCEEEEE
Q 028372 173 GKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVVLR 207 (210)
Q Consensus 173 ~~~d~vv~pvG~Gg~~~Gi~~~~k~~~----~~~~vigv 207 (210)
++||+||+. +..++.|+..++++.+ .++.|+|+
T Consensus 191 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~ 227 (292)
T 3k4h_A 191 QPPTAIMAT--DDLIGLGVLSALSKKGFVVPKDVSIVSF 227 (292)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEE
T ss_pred CCCcEEEEc--ChHHHHHHHHHHHHhCCCCCCeEEEEEe
Confidence 579999976 6677889999999876 46888886
No 376
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=60.09 E-value=6.9 Score=36.31 Aligned_cols=40 Identities=20% Similarity=0.361 Sum_probs=32.7
Q ss_pred HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+.+.+++|++.+|.+.+|.-|.+....|+.+|.++++...
T Consensus 339 ~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~ 378 (795)
T 3slk_A 339 DLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATAS 378 (795)
T ss_dssp CCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECC
T ss_pred HHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 4567788888777777899999999999999998777653
No 377
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=60.08 E-value=63 Score=25.63 Aligned_cols=140 Identities=8% Similarity=0.022 Sum_probs=72.2
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC---------------CCH-----HHHH-HH
Q 028372 53 YSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST---------------CSM-----ERRI-VL 111 (210)
Q Consensus 53 ~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~---------------~~~-----~~~~-~~ 111 (210)
...+..+.+++. ..|+...+.....+++-.+...+++++...... .+. .-.+ .+
T Consensus 59 ~~~~~~l~~~~v-----~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (356)
T 3ipc_A 59 ISVANKFVADGV-----KFVVGHANSGVSIPASEVYAENGILEITPAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLA 133 (356)
T ss_dssp HHHHHHHHHTTC-----CEEEECSSHHHHHHHHHHHHTTTCEEEESSCCCGGGGSSCCTTEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCC-----cEEEcCCCcHHHHHHHHHHHhCCCeEEecCCCCcHhhcCCCCcEEEecCChHHHHHHHHHHHH
Confidence 334444445554 557766666666777778888999977632110 011 1122 23
Q ss_pred HHcCC-EEEEECCCCCHH-HHHHHHHHHHHhCCCe----EEcCCCCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCch
Q 028372 112 RALGA-EIILADSALRFE-EILEKGEEILKKTPDG----YLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTG 185 (210)
Q Consensus 112 ~~~Ga-~v~~v~~~~~~~-~~~~~a~~~~~~~~~~----~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~G 185 (210)
+.+|. +|..+..+..+. +..+..++..++.+.. .+.... ... +.....+|.+ .+||+||++ +++
T Consensus 134 ~~~g~~~iaii~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~-~~d-----~~~~~~~l~~---~~~d~v~~~-~~~ 203 (356)
T 3ipc_A 134 DHFKDAKVAIIHDKTPYGQGLADETKKAANAAGVTEVMYEGVNVG-DKD-----FSALISKMKE---AGVSIIYWG-GLH 203 (356)
T ss_dssp HHCTTCCEEEEECSSHHHHHHHHHHHHHHHHTTCCCSEEEECCTT-CCC-----CHHHHHHHHH---TTCCEEEEE-SCH
T ss_pred HhcCCCEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEEeeCCC-CCC-----HHHHHHHHHh---cCCCEEEEc-cCc
Confidence 44465 555554432222 2222333333443211 111111 111 1122223322 468988865 466
Q ss_pred hHHHHHHHHHHhcCCCCEEEEE
Q 028372 186 GTVTGAGRFLKENNPDIKVVLR 207 (210)
Q Consensus 186 g~~~Gi~~~~k~~~~~~~vigv 207 (210)
..+.++.+.+++.+.++++++.
T Consensus 204 ~~a~~~~~~~~~~g~~~~~~~~ 225 (356)
T 3ipc_A 204 TEAGLIIRQAADQGLKAKLVSG 225 (356)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEC
T ss_pred hHHHHHHHHHHHCCCCCcEEEe
Confidence 7788999999998888888764
No 378
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=59.66 E-value=20 Score=28.87 Aligned_cols=84 Identities=14% Similarity=0.150 Sum_probs=43.5
Q ss_pred eEEEeeCCCchHHHHHHHHHH----cCCcEEEEE-cCCCCHHHHHHHHHcCCEEEEECC-CCCHH-HHHHHHHHHHHhCC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAA----RGYNLIIVM-PSTCSMERRIVLRALGAEIILADS-ALRFE-EILEKGEEILKKTP 142 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~----~g~~~~vvv-p~~~~~~~~~~~~~~Ga~v~~v~~-~~~~~-~~~~~a~~~~~~~~ 142 (210)
..++..++|..+..++..+-. -|-+ +++. +..........++..|++++.++. +.+.. +..+..+.+.+...
T Consensus 60 ~~v~~~~g~t~al~~~~~~~~~~~~~gd~-vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~ 138 (385)
T 2bkw_A 60 QPFVLAGSGTLGWDIFASNFILSKAPNKN-VLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSY 138 (385)
T ss_dssp EEEEEESCTTHHHHHHHHHHSCTTCSCCE-EEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCC
T ss_pred ceEEEcCchHHHHHHHHHHHhccCCCCCe-EEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCC
Confidence 457777888888777766543 2322 2333 222222223567788999999875 32211 11111122222244
Q ss_pred CeEEcCCCCCCh
Q 028372 143 DGYLLRQFENPA 154 (210)
Q Consensus 143 ~~~~~~~~~n~~ 154 (210)
..+++....||.
T Consensus 139 ~~v~~~~~~npt 150 (385)
T 2bkw_A 139 GAVTVTHVDTST 150 (385)
T ss_dssp SEEEEESEETTT
T ss_pred CEEEEEccCCCc
Confidence 667665545553
No 379
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=59.65 E-value=33 Score=28.44 Aligned_cols=105 Identities=18% Similarity=0.105 Sum_probs=64.6
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (210)
+++..-.-|+.|.++|..++.+|++++++-+. .+.......|++. ++ +.++ +.++. +...+.-
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~----~~~~~~~~~g~~~--~~---~l~e-------ll~~a-DiV~l~~ 223 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRE----NSKERARADGFAV--AE---SKDA-------LFEQS-DVLSVHL 223 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSH----HHHHHHHHTTCEE--CS---SHHH-------HHHHC-SEEEECC
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCC----CCHHHHHhcCceE--eC---CHHH-------HHhhC-CEEEEec
Confidence 56777788999999999999999998877442 2334455677752 21 2332 23333 4444432
Q ss_pred CCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHH--HHHHHHHHh
Q 028372 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV--TGAGRFLKE 197 (210)
Q Consensus 150 ~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~--~Gi~~~~k~ 197 (210)
-.++.+ . ..+..+.+.++ +++.+++-+|.|+.. ..+..++++
T Consensus 224 Plt~~t--~--~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~ 267 (352)
T 3gg9_A 224 RLNDET--R--SIITVADLTRM--KPTALFVNTSRAELVEENGMVTALNR 267 (352)
T ss_dssp CCSTTT--T--TCBCHHHHTTS--CTTCEEEECSCGGGBCTTHHHHHHHH
T ss_pred cCcHHH--H--HhhCHHHHhhC--CCCcEEEECCCchhhcHHHHHHHHHh
Confidence 222222 1 12335666666 468899999988853 355666654
No 380
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=59.42 E-value=39 Score=27.92 Aligned_cols=32 Identities=28% Similarity=0.430 Sum_probs=27.9
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
++|....+|..|+.++.+++.+|++++++-+.
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 45777888999999999999999999998764
No 381
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=58.83 E-value=24 Score=30.19 Aligned_cols=53 Identities=23% Similarity=0.207 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHH-cCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372 49 DRIAYSMIKDAED-KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST 102 (210)
Q Consensus 49 ~R~a~~~~~~a~~-~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~ 102 (210)
-|+..+.+..+.+ .|. ....++|+.-..||-|..+|.....+|.+++.+.+.+
T Consensus 201 g~Gv~~~~~~~~~~~g~-~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~ 254 (424)
T 3k92_A 201 AQGVTICIEEAVKKKGI-KLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDAN 254 (424)
T ss_dssp HHHHHHHHHHHHHHTTC-CGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSS
T ss_pred HHHHHHHHHHHHHHcCC-CcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3466666666544 343 2333667888889999999999999999998877654
No 382
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=58.64 E-value=36 Score=29.34 Aligned_cols=65 Identities=17% Similarity=0.105 Sum_probs=37.5
Q ss_pred eEEcCCCCCChhHHHHHHhHHHHHHHhhC----------CCCCEE--EEccCchhHHHHHHHH----HHhcCCCCEEEEE
Q 028372 144 GYLLRQFENPANPKIHYETTGPEIWQDSG----------GKVDAF--ISGIGTGGTVTGAGRF----LKENNPDIKVVLR 207 (210)
Q Consensus 144 ~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~----------~~~d~v--v~pvG~Gg~~~Gi~~~----~k~~~~~~~vigv 207 (210)
.++....+-..||..|+.+.|.|+.+++- +.++.+ +...|+ ||=+|++.. ++...|+..++.+
T Consensus 91 ~~i~gk~gAgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlgG-GTGSG~gs~lle~L~~ey~kk~~~~~ 169 (451)
T 3ryc_A 91 QLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGG-GTGSGFTSLLMERLSVDYGKKSKLEF 169 (451)
T ss_dssp GEEECSSCCTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSS-HHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred HeeeccccccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccCC-CCCccHHHHHHHHHHHhcCcceEEEE
Confidence 34444444555677788888888876641 224444 344444 343454444 5566888777766
Q ss_pred Ee
Q 028372 208 VL 209 (210)
Q Consensus 208 ~~ 209 (210)
++
T Consensus 170 ~v 171 (451)
T 3ryc_A 170 SI 171 (451)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 383
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=58.63 E-value=13 Score=32.07 Aligned_cols=65 Identities=20% Similarity=0.250 Sum_probs=36.8
Q ss_pred eEEcCCCCCChhHHHHHHhHHHHHHHhhC----------CCCCE--EEEccCchhHHHHHHHH----HHhcCCCCEEEEE
Q 028372 144 GYLLRQFENPANPKIHYETTGPEIWQDSG----------GKVDA--FISGIGTGGTVTGAGRF----LKENNPDIKVVLR 207 (210)
Q Consensus 144 ~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~----------~~~d~--vv~pvG~Gg~~~Gi~~~----~k~~~~~~~vigv 207 (210)
.+...+.+-..||..|+.+.|.|+.+++- +.++. |+..+|+ ||=+|++.. +++.+|+..+..+
T Consensus 89 ~~i~g~~gAgNN~A~G~yt~G~e~~d~v~d~IRk~~E~cd~lqGf~i~hSlgG-GTGSG~gs~lle~L~~ey~kk~~~~~ 167 (445)
T 3ryc_B 89 NFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGG-GTGSGMGTLLISKIREEYPDRIMNTF 167 (445)
T ss_dssp GEEECSSCCTTCHHHHHHSHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEESSS-SHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred ceEEccccccCCccccchhhhHHHHHHHHHHHHHHHHcCCccceEEEEeecCC-CCCCcHHHHHHHHHHHHcCccccceE
Confidence 34444445556677798899988876641 12333 3344444 333444443 5566888766665
Q ss_pred Ee
Q 028372 208 VL 209 (210)
Q Consensus 208 ~~ 209 (210)
++
T Consensus 168 sV 169 (445)
T 3ryc_B 168 SV 169 (445)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 384
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=58.41 E-value=25 Score=27.98 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=29.2
Q ss_pred CCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 66 TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 66 ~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+++++.+|+..+|.-|.+++......|.+++++...
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 355688999999999999999988889998888764
No 385
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=58.22 E-value=60 Score=26.44 Aligned_cols=104 Identities=22% Similarity=0.197 Sum_probs=62.1
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (210)
++|..-..|+.|.++|..++.+|++++++-+.. .. +..+.+|.+. . ++++ +.++. +.+.+.-
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~-~~---~~~~~~g~~~---~---~l~~-------~l~~a-DvVil~v 212 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR-KE---EVERELNAEF---K---PLED-------LLRES-DFVVLAV 212 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-CH---HHHHHHCCEE---C---CHHH-------HHHHC-SEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc-ch---hhHhhcCccc---C---CHHH-------HHhhC-CEEEECC
Confidence 457777889999999999999999987765433 22 2334456542 1 2332 22333 4444432
Q ss_pred CCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHHH--HHHHHHHh
Q 028372 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVT--GAGRFLKE 197 (210)
Q Consensus 150 ~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~--Gi~~~~k~ 197 (210)
-.++.. . ..+..++++.+ +++.+++-++.|+... .+..+++.
T Consensus 213 p~~~~t--~--~~i~~~~~~~m--k~~ailIn~srg~~v~~~aL~~aL~~ 256 (334)
T 2dbq_A 213 PLTRET--Y--HLINEERLKLM--KKTAILINIARGKVVDTNALVKALKE 256 (334)
T ss_dssp CCCTTT--T--TCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCChHH--H--HhhCHHHHhcC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 222211 0 12224566666 4578889999988665 67777765
No 386
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=57.82 E-value=68 Score=25.30 Aligned_cols=139 Identities=7% Similarity=0.009 Sum_probs=74.1
Q ss_pred HHHHHHHHc-CCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC-------------CC-----HHHHHHHHHc
Q 028372 54 SMIKDAEDK-GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST-------------CS-----MERRIVLRAL 114 (210)
Q Consensus 54 ~~~~~a~~~-g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~-------------~~-----~~~~~~~~~~ 114 (210)
..+.++.++ +. ..|+...+.....+++-.+...+++++.+.... .+ ..-.+.+..+
T Consensus 59 ~~~~~l~~~~~v-----~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 133 (362)
T 3snr_A 59 TNARRFVTESKA-----DVIMGSSVTPPSVAISNVANEAQIPHIALAPLPITPERAKWSVVMPQPIPIMGKVLYEHMKKN 133 (362)
T ss_dssp HHHHHHHHTSCC-----SEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCCCTTTTTTEEECSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhccCc-----eEEEcCCCcHHHHHHHHHHHHcCccEEEecCCccccCCCCcEEecCCChHHHHHHHHHHHHhc
Confidence 344445554 44 556766565666677777888999987754210 01 1123345556
Q ss_pred CC-EEEEECCCCCH-HHHHHHHHHHHHhCCCeE----EcCCCCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHH
Q 028372 115 GA-EIILADSALRF-EEILEKGEEILKKTPDGY----LLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV 188 (210)
Q Consensus 115 Ga-~v~~v~~~~~~-~~~~~~a~~~~~~~~~~~----~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~ 188 (210)
|. +|..+..+..+ .+..+..++..++.+... +.... .... .....+|.+ .+||+||++ +.+..+
T Consensus 134 g~~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~-~~~~-----~~~~~~l~~---~~~dav~~~-~~~~~a 203 (362)
T 3snr_A 134 NVKTVGYIGYSDSYGDLWFNDLKKQGEAMGLKIVGEERFARP-DTSV-----AGQALKLVA---ANPDAILVG-ASGTAA 203 (362)
T ss_dssp TCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEECTT-CSCC-----HHHHHHHHH---HCCSEEEEE-CCHHHH
T ss_pred CCCEEEEEecCchHHHHHHHHHHHHHHHcCCEEEEEeecCCC-CCCH-----HHHHHHHHh---cCCCEEEEe-cCcchH
Confidence 75 55555433222 222333344444442221 11111 1111 112223332 358998875 467788
Q ss_pred HHHHHHHHhcCCCCEEEEE
Q 028372 189 TGAGRFLKENNPDIKVVLR 207 (210)
Q Consensus 189 ~Gi~~~~k~~~~~~~vigv 207 (210)
.++.+.+++.+.+++++++
T Consensus 204 ~~~~~~~~~~g~~~p~i~~ 222 (362)
T 3snr_A 204 ALPQTTLRERGYNGLIYQT 222 (362)
T ss_dssp HHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHHHHcCCCccEEec
Confidence 9999999999888887654
No 387
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=57.68 E-value=18 Score=30.56 Aligned_cols=36 Identities=33% Similarity=0.531 Sum_probs=28.8
Q ss_pred CCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 65 ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 65 ~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+-|+ ++|....+|..|+.++.+|+.+|++++++-+.
T Consensus 32 ~~~~-~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~ 67 (419)
T 4e4t_A 32 ILPG-AWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPD 67 (419)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 3355 44666788999999999999999999887554
No 388
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=57.46 E-value=95 Score=26.89 Aligned_cols=119 Identities=9% Similarity=0.011 Sum_probs=62.6
Q ss_pred HHHHHHHcCCcEEEEEc------CCCCH-----HHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHHhCCC-eEEc
Q 028372 84 LAFIAAARGYNLIIVMP------STCSM-----ERRIVLRALGAEIILADSAL---RF-EEILEKGEEILKKTPD-GYLL 147 (210)
Q Consensus 84 lA~~a~~~g~~~~vvvp------~~~~~-----~~~~~~~~~Ga~v~~v~~~~---~~-~~~~~~a~~~~~~~~~-~~~~ 147 (210)
+..+|+..|.++..-.- .+..+ ......-..|++-+...++. .| .++.+...+.+++.+. ..+.
T Consensus 263 ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~dG~DavMLSgETA~G~yPveaV~~m~~I~~~~E~~~~~~ 342 (470)
T 1e0t_A 263 MIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSR 342 (470)
T ss_dssp HHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC------CHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHcCCCEEEechhhHhhccCCCccHHHHhhhhHhhhcCccEEEecccccCCCCHHHHHHHHHHHHHHHHhhhhhh
Confidence 44678999999766321 11111 22222234599988876642 12 3444444443333212 1121
Q ss_pred CCCC---CChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372 148 RQFE---NPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV 208 (210)
Q Consensus 148 ~~~~---n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~ 208 (210)
..+. ............+.++.++++ ..+||+..-||.|+ +.+....|.+.|++++
T Consensus 343 ~~~~~~~~~~~~~~aia~aa~~~a~~l~--a~aIv~~T~sG~ta----~~isr~RP~~pI~a~t 400 (470)
T 1e0t_A 343 LEFNNDNRKLRITEAVCRGAVETAEKLD--APLIVVATQGGKSA----RAVRKYFPDATILALT 400 (470)
T ss_dssp CC---------CHHHHHHHHHHHHHHTT--CSBEEEECSSSHHH----HHHHTTCCSSBEEEEE
T ss_pred HHHhhhccccchHHHHHHHHHHHHHhcC--CCEEEEECCChhHH----HHHHhhCCCCCEEEEC
Confidence 1111 111111223344557777773 56899999999984 5555678999999987
No 389
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=57.40 E-value=73 Score=25.55 Aligned_cols=115 Identities=18% Similarity=0.201 Sum_probs=62.9
Q ss_pred EEEeeCCCchHHHHHHHHHHcC----CcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEE
Q 028372 71 TLIEVTSGNTGVGLAFIAAARG----YNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYL 146 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~~g----~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~ 146 (210)
+|..-..||.|.++|..-...| .+++++-+. ....+.+.++.+|..+. . +..+ ..++. +.++
T Consensus 24 kI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~-~~~~~~~~l~~~G~~~~--~---~~~e-------~~~~a-DvVi 89 (322)
T 2izz_A 24 SVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD-MDLATVSALRKMGVKLT--P---HNKE-------TVQHS-DVLF 89 (322)
T ss_dssp CEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC-TTSHHHHHHHHHTCEEE--S---CHHH-------HHHHC-SEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC-ccHHHHHHHHHcCCEEe--C---ChHH-------HhccC-CEEE
Confidence 3556678999999999988888 677665332 22135555666786642 2 1221 22233 4555
Q ss_pred cCCCCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEE
Q 028372 147 LRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLR 207 (210)
Q Consensus 147 ~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv 207 (210)
+--- +.. ...+..+|...+ .++.+|+.+-+|-...-+...+.+..+..+++..
T Consensus 90 lav~--~~~----~~~vl~~l~~~l--~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~ 142 (322)
T 2izz_A 90 LAVK--PHI----IPFILDEIGADI--EDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRC 142 (322)
T ss_dssp ECSC--GGG----HHHHHHHHGGGC--CTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEE
T ss_pred EEeC--HHH----HHHHHHHHHhhc--CCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEE
Confidence 4321 111 122334444433 3566777776655554455555554456677654
No 390
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=57.29 E-value=38 Score=28.88 Aligned_cols=51 Identities=31% Similarity=0.268 Sum_probs=38.1
Q ss_pred HHHHHHHHHHH-HcCCC-CCCCeEEEeeCCCchHHHHHHHHHH-cCCcEEEEEcC
Q 028372 50 RIAYSMIKDAE-DKGLI-TPGKTTLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPS 101 (210)
Q Consensus 50 R~a~~~~~~a~-~~g~~-~~~~~~vv~~ssGN~g~alA~~a~~-~g~~~~vvvp~ 101 (210)
|++.+.+..+. +.|.- -.| +++.....||-|..+|..++. +|.+++.+.+.
T Consensus 192 ~Gv~~~~~~~~~~~G~~~l~g-ktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~ 245 (419)
T 1gtm_A 192 RGASYTIREAAKVLGWDTLKG-KTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDS 245 (419)
T ss_dssp HHHHHHHHHHHHHTTCSCSTT-CEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred hHHHHHHHHHHHHhCCcccCC-CEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 67777776654 34532 223 668888899999999999999 99998888654
No 391
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=57.28 E-value=32 Score=29.72 Aligned_cols=50 Identities=16% Similarity=-0.001 Sum_probs=38.1
Q ss_pred HHHHHHHHHHH-HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 50 RIAYSMIKDAE-DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 50 R~a~~~~~~a~-~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
|++.+.+..+. +.|. ....++|+....||-|..+|.....+|.+++.+.+
T Consensus 211 ~Gv~~~~~~~~~~~G~-~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD 261 (449)
T 1bgv_A 211 YGSVYYVEAVMKHEND-TLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSG 261 (449)
T ss_dssp HHHHHHHHHHHHHTTC-CSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHccC-CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEe
Confidence 67777777654 4453 22236688888899999999999999999998766
No 392
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=57.25 E-value=69 Score=25.21 Aligned_cols=42 Identities=17% Similarity=0.183 Sum_probs=31.3
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCCEEEEE
Q 028372 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVVLR 207 (210)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~-~~~~vigv 207 (210)
...+++++- +++|+||++ +..++.|+..++++.+ .++.|+|+
T Consensus 179 ~~~~ll~~~-~~~~aI~~~--nD~~A~g~~~al~~~G~~dv~VvG~ 221 (316)
T 1tjy_A 179 TAEGIIKAY-PDLDAIIAP--DANALPAAAQAAENLKRNNLAIVGF 221 (316)
T ss_dssp HHHHHHHHC-SSCCEEEEC--STTHHHHHHHHHHHTTCCSCEEEEB
T ss_pred HHHHHHHhC-CCCCEEEEC--CCccHHHHHHHHHHcCCCCEEEEEe
Confidence 445666654 579999987 4567789999999887 56888875
No 393
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=56.97 E-value=33 Score=26.33 Aligned_cols=71 Identities=17% Similarity=0.119 Sum_probs=40.6
Q ss_pred CeEEEeeCCCchHHHHHHHHHH---cCCcEEEEEcCCCC-HHHHHHHHHc--CCEEEEECCCC-CHHHHHHHHHHHHH
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAA---RGYNLIIVMPSTCS-MERRIVLRAL--GAEIILADSAL-RFEEILEKGEEILK 139 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~---~g~~~~vvvp~~~~-~~~~~~~~~~--Ga~v~~v~~~~-~~~~~~~~a~~~~~ 139 (210)
+..+|+..+|--|.++|..-.. .|.+++++...... ....+.++.. |.++..+..+- +.++..+..++..+
T Consensus 7 k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 4667888888888888888776 79988776543211 1112233332 67776665432 23344444455544
No 394
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=56.77 E-value=65 Score=24.78 Aligned_cols=42 Identities=19% Similarity=0.306 Sum_probs=30.5
Q ss_pred HHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCCEEEEEE
Q 028372 164 GPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVVLRV 208 (210)
Q Consensus 164 ~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~----~~~~vigv~ 208 (210)
..+++++- ++||+|||. +..++.|+..++++.+ .++.|+|+-
T Consensus 179 ~~~~l~~~-~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~d 224 (288)
T 3gv0_A 179 GQRLMQSS-DRPDGIVSI--SGSSTIALVAGFEAAGVKIGEDVDIVSKQ 224 (288)
T ss_dssp HHHHTTSS-SCCSEEEES--CHHHHHHHHHHHHTTTCCTTTSCEEEEEE
T ss_pred HHHHHhCC-CCCcEEEEc--CcHHHHHHHHHHHHcCCCCCCceEEEEec
Confidence 34444432 569999975 6677889999999876 368898864
No 395
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=56.67 E-value=33 Score=26.34 Aligned_cols=85 Identities=11% Similarity=0.099 Sum_probs=48.6
Q ss_pred cEEEEEcCC--C--CHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHH
Q 028372 94 NLIIVMPST--C--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQ 169 (210)
Q Consensus 94 ~~~vvvp~~--~--~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~ 169 (210)
+.++++-.. . -..-.+.+...|++|+.+..+. ...+..+++.++.+...++. . |... ......+..++.+
T Consensus 15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~-~-Dv~~-~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD---RFKDRITEFAAEFGSELVFP-C-DVAD-DAQIDALFASLKT 88 (271)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG---GGHHHHHHHHHHTTCCCEEE-C-CTTC-HHHHHHHHHHHHH
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch---hhHHHHHHHHHHcCCcEEEE-C-CCCC-HHHHHHHHHHHHH
Confidence 455555533 2 2345566677899999987642 22234445545443322221 1 2222 2333556677777
Q ss_pred hhCCCCCEEEEccCch
Q 028372 170 DSGGKVDAFISGIGTG 185 (210)
Q Consensus 170 q~~~~~d~vv~pvG~G 185 (210)
++ +.+|.+|..+|..
T Consensus 89 ~~-g~id~lv~nAg~~ 103 (271)
T 3ek2_A 89 HW-DSLDGLVHSIGFA 103 (271)
T ss_dssp HC-SCEEEEEECCCCC
T ss_pred Hc-CCCCEEEECCccC
Confidence 77 6799999999864
No 396
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=56.54 E-value=72 Score=25.22 Aligned_cols=41 Identities=20% Similarity=0.076 Sum_probs=30.1
Q ss_pred HHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCCEEEEE
Q 028372 164 GPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVVLR 207 (210)
Q Consensus 164 ~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~-~~~~vigv 207 (210)
..+++++ .++||+|||. +..++.|+..++++.+ .++.|+|+
T Consensus 225 ~~~~l~~-~~~~~ai~~~--nd~~A~g~~~al~~~g~~di~vvg~ 266 (342)
T 1jx6_A 225 AKASLAK-HPDVDFIYAC--STDVALGAVDALAELGREDIMINGW 266 (342)
T ss_dssp HHHHHHH-CCCCSEEEES--SHHHHHHHHHHHHHHTCTTSEEBCS
T ss_pred HHHHHHh-CCCccEEEEC--CChhHHHHHHHHHHcCCCCcEEEEe
Confidence 3455554 3569999975 6678889999998876 47888764
No 397
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=56.44 E-value=12 Score=30.61 Aligned_cols=29 Identities=21% Similarity=0.159 Sum_probs=26.3
Q ss_pred EEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~~g~~~~vvv 99 (210)
.|+...+|-.|.++|..-++.|++++||=
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEe
Confidence 47788999999999999999999999983
No 398
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=56.40 E-value=30 Score=29.55 Aligned_cols=51 Identities=20% Similarity=0.261 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 50 RIAYSMIKDAED-KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 50 R~a~~~~~~a~~-~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
|++.+.+..+.+ .|. ....++++....||-|..+|.....+|.+++.+.+.
T Consensus 199 ~Gv~~~~~~~~~~~g~-~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~ 250 (419)
T 3aoe_E 199 LGALLVLEALAKRRGL-DLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATS 250 (419)
T ss_dssp HHHHHHHHHHHHHHTC-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred HHHHHHHHHHHHhcCC-CccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcC
Confidence 677777766543 453 222366788889999999999999999999977654
No 399
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=56.35 E-value=28 Score=26.86 Aligned_cols=42 Identities=14% Similarity=0.181 Sum_probs=30.9
Q ss_pred HHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCCEEEEEE
Q 028372 164 GPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVVLRV 208 (210)
Q Consensus 164 ~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~----~~~~vigv~ 208 (210)
..+++++ .++||+||+. +..++.|+..++++.+ .++.|+|+-
T Consensus 179 ~~~~l~~-~~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d 224 (289)
T 3g85_A 179 AKKLMKL-KNTPKALFCN--SDSIALGVISVLNKRQISIPDDIEIVAIG 224 (289)
T ss_dssp HHHHTTS-SSCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEE
T ss_pred HHHHHcC-CCCCcEEEEc--CCHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 3445443 2569999975 6778889999999876 378898874
No 400
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=56.32 E-value=50 Score=27.28 Aligned_cols=104 Identities=17% Similarity=0.126 Sum_probs=64.1
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (210)
+++..-.-|+-|.++|..++.+|++++.+-+...+.... .|++. ++ +++ ++.++. +...+.-
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-----~g~~~--~~---~l~-------ell~~s-DvV~l~~ 235 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE-----EGAIY--HD---TLD-------SLLGAS-DIFLIAA 235 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-----TTCEE--CS---SHH-------HHHHTC-SEEEECS
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh-----cCCeE--eC---CHH-------HHHhhC-CEEEEec
Confidence 567777889999999999999999988775544333221 15432 21 232 333443 4554433
Q ss_pred CCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHH--HHHHHHHHh
Q 028372 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV--TGAGRFLKE 197 (210)
Q Consensus 150 ~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~--~Gi~~~~k~ 197 (210)
-.++.+ ...+..+.+.++ +++.+++-++.|+.. ..+..++++
T Consensus 236 Plt~~T----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~ 279 (345)
T 4g2n_A 236 PGRPEL----KGFLDHDRIAKI--PEGAVVINISRGDLINDDALIEALRS 279 (345)
T ss_dssp CCCGGG----TTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCCHHH----HHHhCHHHHhhC--CCCcEEEECCCCchhCHHHHHHHHHh
Confidence 223322 123446777777 468999999998864 455666654
No 401
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=56.00 E-value=12 Score=32.01 Aligned_cols=37 Identities=32% Similarity=0.464 Sum_probs=23.0
Q ss_pred CCCEEEEccC-chhHHHHHHHHH----HhcCCCCEEEEEEeC
Q 028372 174 KVDAFISGIG-TGGTVTGAGRFL----KENNPDIKVVLRVLL 210 (210)
Q Consensus 174 ~~d~vv~pvG-~Gg~~~Gi~~~~----k~~~~~~~vigv~~l 210 (210)
..|.|++..| +|||=+|.+-.+ ++..++..+++++++
T Consensus 147 ~~d~f~I~aglGGGTGSG~gp~la~~lke~~~~~~~~~vvt~ 188 (427)
T 3m89_A 147 IVDQFLICLGAGGGVGTGWGSLVLQLIREQFFPCPVSMLISL 188 (427)
T ss_dssp CCSEEEEEEETTSHHHHHHHHHHHHHHHTTCSSSCEEEEEEE
T ss_pred CCCEEEEeeecCCCccccHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 5788877766 345545654443 444577778887753
No 402
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=55.85 E-value=28 Score=26.52 Aligned_cols=33 Identities=33% Similarity=0.394 Sum_probs=27.6
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+++.+|+..+|.-|.++|..-...|.+++++..
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r 46 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGS 46 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC
Confidence 457788888899999999998899999877655
No 403
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=55.61 E-value=37 Score=26.33 Aligned_cols=55 Identities=24% Similarity=0.179 Sum_probs=36.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHc--CCEEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRAL--GAEIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~--Ga~v~~v~~ 123 (210)
+..+|+..+|--|.++|..-...|.+++++-..... ....+.++.. +..+..+..
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~ 68 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVA 68 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEec
Confidence 467888888889999999988899998777543211 1223334333 466665544
No 404
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=55.40 E-value=40 Score=29.39 Aligned_cols=52 Identities=13% Similarity=0.168 Sum_probs=36.8
Q ss_pred CCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEE
Q 028372 63 GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEI 118 (210)
Q Consensus 63 g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v 118 (210)
+...+| ++|+....|+-|..+|..++.+|.+++++-+ .+.+.+..+.+|+++
T Consensus 269 ~~~l~G-ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~---~~~~~~~A~~~Ga~~ 320 (494)
T 3ce6_A 269 DALIGG-KKVLICGYGDVGKGCAEAMKGQGARVSVTEI---DPINALQAMMEGFDV 320 (494)
T ss_dssp CCCCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHTTCEE
T ss_pred CCCCCc-CEEEEEccCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCEE
Confidence 334456 4466667899999999999999997655432 345555666788874
No 405
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=54.79 E-value=22 Score=30.89 Aligned_cols=65 Identities=25% Similarity=0.218 Sum_probs=36.4
Q ss_pred EEcCCCCCChhHHHHHHhHHHHHHHhhC----------CCCCEEEEc--cCch---hHHHHHHHHHHhcCCCCEEEEEEe
Q 028372 145 YLLRQFENPANPKIHYETTGPEIWQDSG----------GKVDAFISG--IGTG---GTVTGAGRFLKENNPDIKVVLRVL 209 (210)
Q Consensus 145 ~~~~~~~n~~~~~~g~~t~~~Ei~~q~~----------~~~d~vv~p--vG~G---g~~~Gi~~~~k~~~~~~~vigv~~ 209 (210)
+...+.+-..||..|+.+.|.|+.++.- +.++.|++. +|+| |..+=++..+++.+|+..++.+.+
T Consensus 94 ~it~~~GAgnn~a~G~~~~G~~~~ee~~d~Ir~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~l~e~y~~~~ilt~~V 173 (473)
T 2bto_A 94 LISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIPVLSCAV 173 (473)
T ss_dssp EEECSSCCTTCHHHHHTSHHHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHTCSSCEEEEEE
T ss_pred eEecccCCCCCcCCCcchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHHHHHHcCCCceEEEEE
Confidence 3444444445666787788877665531 123444444 4332 223335566677788877776654
No 406
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=54.73 E-value=82 Score=26.18 Aligned_cols=45 Identities=18% Similarity=0.161 Sum_probs=31.4
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHH
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR 112 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~ 112 (210)
|.+..+..=.-|.+.+++.++.++|++++++.|+.. ++.-.+.++
T Consensus 188 glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~ 234 (353)
T 3sds_A 188 GLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQ 234 (353)
T ss_dssp TCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHH
Confidence 334333343457889999999999999999999864 444444443
No 407
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=54.49 E-value=37 Score=26.27 Aligned_cols=71 Identities=14% Similarity=0.100 Sum_probs=40.5
Q ss_pred CeEEEeeC--CCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHh
Q 028372 69 KTTLIEVT--SGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA-LRFEEILEKGEEILKK 140 (210)
Q Consensus 69 ~~~vv~~s--sGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~ 140 (210)
+..+|+.. +|.-|.++|..-...|.+++++.... .....+..+.++.++..+..+ .+.++..+..++..++
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR-LRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEA 81 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC-HHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh-HHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHH
Confidence 46778877 78899999999888999877765432 111122233455554443322 1234444444544443
No 408
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=54.46 E-value=63 Score=25.57 Aligned_cols=33 Identities=27% Similarity=0.325 Sum_probs=28.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
++.+|+..+|--|.+++..-...|.+++++...
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecC
Confidence 477889999999999999988889998887653
No 409
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=54.33 E-value=47 Score=25.01 Aligned_cols=53 Identities=23% Similarity=0.253 Sum_probs=36.6
Q ss_pred CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHH-HH-cCCEEEEECC
Q 028372 68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVL-RA-LGAEIILADS 123 (210)
Q Consensus 68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~-~~-~Ga~v~~v~~ 123 (210)
++..+|+..+|.-|.++|......|.+++++... ..+.+.+ +. .+.+++.++-
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~D~ 61 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT---QADLDSLVRECPGIEPVCVDL 61 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHSTTCEEEECCT
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCCCEEEEeC
Confidence 3477899999999999999988899998776543 2333322 22 2667765554
No 410
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=54.31 E-value=56 Score=24.12 Aligned_cols=59 Identities=15% Similarity=0.092 Sum_probs=39.9
Q ss_pred HHHHcCCCCCCCeEEEeeCCCchHH-HHHHHHHHcCCcEEEEEcCC--CCH----HHHHHHHHcCCEEEE
Q 028372 58 DAEDKGLITPGKTTLIEVTSGNTGV-GLAFIAAARGYNLIIVMPST--CSM----ERRIVLRALGAEIIL 120 (210)
Q Consensus 58 ~a~~~g~~~~~~~~vv~~ssGN~g~-alA~~a~~~g~~~~vvvp~~--~~~----~~~~~~~~~Ga~v~~ 120 (210)
.+++.|. .+.+++.-..+.+. +.|..|..+|++++++.+-. .++ .-++.|+..|++|+.
T Consensus 119 ~L~~~gi----~~lvv~G~~t~~CV~~Ta~da~~~G~~v~v~~Da~~~~~~~~~~~al~~m~~~G~~i~~ 184 (186)
T 3gbc_A 119 WLRQRGV----DEVDVVGIATDHCVRQTAEDAVRNGLATRVLVDLTAGVSADTTVAALEEMRTASVELVC 184 (186)
T ss_dssp HHHHTTC----CEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTCEEEC
T ss_pred HHHhcCC----CEEEEEEecccHHHHHHHHHHHHCCCeEEEEhhhcCCCCHHHHHHHHHHHHHcCCEEee
Confidence 3345564 35566776677766 46667899999999987642 222 346778889998753
No 411
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=54.22 E-value=15 Score=29.64 Aligned_cols=54 Identities=17% Similarity=-0.012 Sum_probs=34.6
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~ 124 (210)
..++..++|..+..++..+- .+-.-.++++...-..-...++..|++++.++.+
T Consensus 85 ~~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 138 (363)
T 3ffh_A 85 EELIFTAGVDELIELLTRVL-LDTTTNTVMATPTFVQYRQNALIEGAEVREIPLL 138 (363)
T ss_dssp GGEEEESSHHHHHHHHHHHH-CSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECC
T ss_pred hhEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC
Confidence 34676777777777666554 2222244455444555666778899999998754
No 412
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=54.19 E-value=1.1e+02 Score=26.91 Aligned_cols=119 Identities=9% Similarity=0.059 Sum_probs=67.1
Q ss_pred HHHHHHHcCCcEEEEEc------CCCCH-----HHHHHHHHcCCEEEEECCC----CCHHHHHHHHHHHHHhCCCeEE-c
Q 028372 84 LAFIAAARGYNLIIVMP------STCSM-----ERRIVLRALGAEIILADSA----LRFEEILEKGEEILKKTPDGYL-L 147 (210)
Q Consensus 84 lA~~a~~~g~~~~vvvp------~~~~~-----~~~~~~~~~Ga~v~~v~~~----~~~~~~~~~a~~~~~~~~~~~~-~ 147 (210)
+-..|+..|.|+++-.- .+..+ ......-..|++-+...++ .--.++.+...+.+++.+..++ -
T Consensus 313 II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~ 392 (526)
T 4drs_A 313 MISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYP 392 (526)
T ss_dssp HHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCceEEEcchhhcccCHHHHHHHHHHHHHHHhhcccch
Confidence 55679999999887632 11112 2222333458888877632 1123555554444443222111 0
Q ss_pred -------CCCCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372 148 -------RQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV 208 (210)
Q Consensus 148 -------~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~ 208 (210)
.....+.......+..+.++.+++ +..+||+..-||.| ++.+....|.+.|++++
T Consensus 393 ~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l--~a~aIv~~T~sG~t----A~~iSr~RP~~pI~a~T 454 (526)
T 4drs_A 393 VLYHAIHSSVPKPVAVPEAIACSAVESAHDV--NAKLIITITETGNT----ARLISKYRPSQTIIACT 454 (526)
T ss_dssp HHHHHHHHHSCSSCCHHHHHHHHHHHHHHHT--TCSEEEEECSSSHH----HHHHHHTCCSSEEEEEE
T ss_pred hhhhhhhhccCCCCCHHHHHHHHHHHHHHhC--CCCEEEEECCCcHH----HHHHHhhCCCCCEEEEC
Confidence 011122221223344556777777 46899999999998 45555678999999986
No 413
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=53.73 E-value=47 Score=26.43 Aligned_cols=46 Identities=22% Similarity=0.192 Sum_probs=32.7
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEE
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEI 118 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v 118 (210)
+++..-..|+.|.++|..++.+|.+++++-+. ..+.+.+..+|+++
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~---~~~~~~~~~~g~~~ 203 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARS---SAHLARITEMGLVP 203 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTCEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHCCCeE
Confidence 45666678999999999999999987776553 23444444566654
No 414
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=53.72 E-value=24 Score=25.25 Aligned_cols=32 Identities=22% Similarity=0.411 Sum_probs=28.1
Q ss_pred EEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPST 102 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~ 102 (210)
.++.-.+|..|..+|...++.|.+++++-+..
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 47778999999999999999999999997653
No 415
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=53.62 E-value=43 Score=26.45 Aligned_cols=45 Identities=22% Similarity=0.140 Sum_probs=32.8
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCE
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAE 117 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~ 117 (210)
.+|..-..|+.|.++|......|++++++-+ .+.+.+.+...|..
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~---~~~~~~~~~~~g~~ 48 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDL---VQSAVDGLVAAGAS 48 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECS---SHHHHHHHHHTTCE
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcC---CHHHHHHHHHCCCe
Confidence 3466668899999999999999998887733 45555555555543
No 416
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=53.58 E-value=28 Score=28.07 Aligned_cols=33 Identities=15% Similarity=0.087 Sum_probs=28.7
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
++.+|+..+|.-|.+++..-...|.+++++...
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEeCC
Confidence 477899999999999999988889999888754
No 417
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=53.50 E-value=48 Score=26.67 Aligned_cols=44 Identities=27% Similarity=0.341 Sum_probs=32.5
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGA 116 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga 116 (210)
.+|..-..|+.|.++|......|.+++++- ..+.+.+.+...|+
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~d---r~~~~~~~l~~~g~ 75 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWN---RTPARAASLAALGA 75 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEEC---SCHHHHHHHHTTTC
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEc---CCHHHHHHHHHCCC
Confidence 456667889999999999999999988763 34555555554454
No 418
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=53.45 E-value=73 Score=24.35 Aligned_cols=146 Identities=16% Similarity=0.103 Sum_probs=76.5
Q ss_pred HHHHHHHHcCCCCCCCeEEEeeCCC-chHHHHHHHHHHcCCcEEEEEcCCCC--------H-----HHHHHHHH--cCC-
Q 028372 54 SMIKDAEDKGLITPGKTTLIEVTSG-NTGVGLAFIAAARGYNLIIVMPSTCS--------M-----ERRIVLRA--LGA- 116 (210)
Q Consensus 54 ~~~~~a~~~g~~~~~~~~vv~~ssG-N~g~alA~~a~~~g~~~~vvvp~~~~--------~-----~~~~~~~~--~Ga- 116 (210)
..+..+..++. ..++..... .........+...|+|++.+-..... . .-.+.+.. .|-
T Consensus 52 ~~~~~l~~~~v-----dgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~V~~D~~~~g~~~~~~l~~~~~g~~ 126 (291)
T 3l49_A 52 SQIQTLIAQKP-----DAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTATPHAINNTTSNNYSIGAELALQMVADLGGKG 126 (291)
T ss_dssp HHHHHHHHHCC-----SEEEEESSCHHHHHHHHHHHHHTTCCEEEESCCCTTCSEEEEECHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCC-----CEEEEeCCChhhhHHHHHHHHHCCCcEEEecCCCCCcCceEecChHHHHHHHHHHHHHHcCCCc
Confidence 34445555554 445544433 33344455567779998776432110 1 11222333 454
Q ss_pred EEEEECCCCCHH---HHHHHHHHHHHhCCCeEEcCCC---CCChhHHHHHHhHHHHHHHhhCC---CCCEEEEccCchhH
Q 028372 117 EIILADSALRFE---EILEKGEEILKKTPDGYLLRQF---ENPANPKIHYETTGPEIWQDSGG---KVDAFISGIGTGGT 187 (210)
Q Consensus 117 ~v~~v~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~---~n~~~~~~g~~t~~~Ei~~q~~~---~~d~vv~pvG~Gg~ 187 (210)
+|..+.+..+.. ++.+-.++..++.++.-.+... ........++ ....+++++- + +||+||+. +...
T Consensus 127 ~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~-~~~~~~~ai~~~--~d~~ 202 (291)
T 3l49_A 127 NVLVFNGFYSVPVCKIRYDQMKYVLEAFPDVKIIEPELRDVIPNTIQSAY-SNVTDMLTKY-PNEGDVGAIWAC--WDVP 202 (291)
T ss_dssp EEEEECSCTTSHHHHHHHHHHHHHHHTCTTEEECSSCBCCCSSSHHHHHH-HHHHHHHHHC-CSTTSCCEEEES--SHHH
T ss_pred eEEEEeCCCCCchHHHHHHHHHHHHHHCCCCEEEeeeccCCCCCCHHHHH-HHHHHHHHhC-CCcCCcCEEEEC--CCch
Confidence 666665432222 2222234444454333322211 1112223333 3455666665 4 79999875 6778
Q ss_pred HHHHHHHHHhcCC-CCEEEEEE
Q 028372 188 VTGAGRFLKENNP-DIKVVLRV 208 (210)
Q Consensus 188 ~~Gi~~~~k~~~~-~~~vigv~ 208 (210)
+.|+..++++.+- ++.|+|+-
T Consensus 203 a~g~~~al~~~g~~di~vvg~d 224 (291)
T 3l49_A 203 MIGATQALQAAGRTDIRTYGVD 224 (291)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEE
T ss_pred HHHHHHHHHHcCCCCeEEEEec
Confidence 8899999998866 88888864
No 419
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=53.35 E-value=14 Score=29.18 Aligned_cols=29 Identities=7% Similarity=0.193 Sum_probs=25.7
Q ss_pred EEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~~g~~~~vvv 99 (210)
-|+.-.+|..|.+.|..+++.|++++++=
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie 36 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFD 36 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 47778999999999999999999999884
No 420
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=53.21 E-value=20 Score=29.72 Aligned_cols=34 Identities=29% Similarity=0.557 Sum_probs=28.7
Q ss_pred CCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 67 PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 67 ~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
++ ++|....+|..|+.++.+++.+|++++++-+.
T Consensus 13 ~~-k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 13 PG-KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp TT-SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 44 45777888999999999999999999998764
No 421
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=53.02 E-value=15 Score=29.13 Aligned_cols=29 Identities=14% Similarity=0.292 Sum_probs=25.7
Q ss_pred EEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~~g~~~~vvv 99 (210)
-|+.-.+|..|.+.|..++++|+++++|=
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE 36 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIE 36 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 36777899999999999999999999883
No 422
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=52.89 E-value=37 Score=27.69 Aligned_cols=53 Identities=23% Similarity=0.229 Sum_probs=36.4
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHc-CCEEEEEC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRAL-GAEIILAD 122 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~-Ga~v~~v~ 122 (210)
++.+|+..+|..|.+++......|.+++++....... ..+.+... +.+++..+
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~l~~~~~v~~v~~D 59 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL-IAEELQAIPNVTLFQGP 59 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH-HHHHHHTSTTEEEEESC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChh-hHHHHhhcCCcEEEECC
Confidence 4678999999999999998888899999888654433 22233332 44554444
No 423
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=52.87 E-value=51 Score=24.74 Aligned_cols=52 Identities=17% Similarity=0.196 Sum_probs=36.1
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHH-H-HcCCEEEEECC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVL-R-ALGAEIILADS 123 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~-~-~~Ga~v~~v~~ 123 (210)
++.+|+..+|.-|.++|..-...|.+++++.... .+.+.+ + ..+.+++.++-
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~D~ 61 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN---SDLVSLAKECPGIEPVCVDL 61 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHSTTCEEEECCT
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHhccCCCcEEecC
Confidence 4778999999999999999888999987765532 222222 2 23667765554
No 424
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=52.84 E-value=30 Score=29.58 Aligned_cols=44 Identities=14% Similarity=0.240 Sum_probs=33.2
Q ss_pred chHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHH----HHHcCCEEEEEC
Q 028372 79 NTGVGLAFIAAARGYNLIIVMPSTC--SMERRIV----LRALGAEIILAD 122 (210)
Q Consensus 79 N~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~----~~~~Ga~v~~v~ 122 (210)
|.+.+++.++.++|++++++.|+.- .+.-++. ++..|+++..+.
T Consensus 206 nVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~ 255 (418)
T 2yfk_A 206 SVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTN 255 (418)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEES
T ss_pred hHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 5999999999999999999999864 4444333 345677776654
No 425
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=52.76 E-value=52 Score=28.03 Aligned_cols=51 Identities=27% Similarity=0.241 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCCchHHHHHHHHHH-cCCcEEEEEcC
Q 028372 50 RIAYSMIKDAED-KGLITPGKTTLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPS 101 (210)
Q Consensus 50 R~a~~~~~~a~~-~g~~~~~~~~vv~~ssGN~g~alA~~a~~-~g~~~~vvvp~ 101 (210)
|++.+.+..+.+ .|. ....++++....||-|..+|..... +|.+++.+.+.
T Consensus 190 ~Gv~~~~~~~~~~~g~-~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~ 242 (415)
T 2tmg_A 190 RGVKVCAGLAMDVLGI-DPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDS 242 (415)
T ss_dssp HHHHHHHHHHHHHTTC-CTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred HHHHHHHHHHHHHcCC-CcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeC
Confidence 677777776544 554 3223667888899999999988777 89999877664
No 426
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=52.75 E-value=53 Score=28.00 Aligned_cols=66 Identities=17% Similarity=0.196 Sum_probs=37.0
Q ss_pred eEEcCCCCCChhHHHHHHhHHHHHHHhhC-------CC---CCEEEEc--cCch---hHHHHHHHHHHhcCCCCEEEEEE
Q 028372 144 GYLLRQFENPANPKIHYETTGPEIWQDSG-------GK---VDAFISG--IGTG---GTVTGAGRFLKENNPDIKVVLRV 208 (210)
Q Consensus 144 ~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~-------~~---~d~vv~p--vG~G---g~~~Gi~~~~k~~~~~~~vigv~ 208 (210)
.+...+.+-..||..|+.+.|.|+.++.- +. ++.|++. +|+| |..+=++..+++.+|+..++.+.
T Consensus 90 ~i~~g~~gAgnn~a~G~~~~G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~y~~~~~lt~~ 169 (426)
T 2btq_B 90 SIVRKIPGAANNWARGYNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAYPKKRIFTFS 169 (426)
T ss_dssp SEEECCSCCTTCHHHHHTHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred cccccccCccCcccccccchhHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHHcCcCceEEEE
Confidence 34443333444566787777776665531 22 3335544 4332 34445666777888887777665
Q ss_pred e
Q 028372 209 L 209 (210)
Q Consensus 209 ~ 209 (210)
+
T Consensus 170 V 170 (426)
T 2btq_B 170 V 170 (426)
T ss_dssp E
T ss_pred E
Confidence 4
No 427
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=52.60 E-value=16 Score=27.86 Aligned_cols=31 Identities=26% Similarity=0.381 Sum_probs=27.5
Q ss_pred EEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
.|+.-.+|..|.++|...++.|++++++-..
T Consensus 5 dVvVVGgG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 5 QVLIVGAGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 3777899999999999999999999998764
No 428
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=52.39 E-value=40 Score=29.01 Aligned_cols=51 Identities=20% Similarity=0.149 Sum_probs=37.6
Q ss_pred HHHHHHHHHHH-HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 50 RIAYSMIKDAE-DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 50 R~a~~~~~~a~-~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
|++.+.+..+. +.|. ....++|+....||-|..+|.....+|.+++.+.+.
T Consensus 216 ~Gv~~~~~~~~~~~g~-~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~ 267 (440)
T 3aog_A 216 RGVFITAAAAAEKIGL-QVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDH 267 (440)
T ss_dssp HHHHHHHHHHHHHHTC-CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHhcCC-CccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcC
Confidence 57777776654 3453 222356777889999999999999999999877664
No 429
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=52.29 E-value=12 Score=29.43 Aligned_cols=29 Identities=10% Similarity=0.134 Sum_probs=25.6
Q ss_pred EEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVM 99 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~~g~~~~vvv 99 (210)
-|+.-.+|..|.+.|..++++|++++++=
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE 34 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYE 34 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEEC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 47778899999999999999999998873
No 430
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=52.22 E-value=66 Score=26.57 Aligned_cols=106 Identities=18% Similarity=0.129 Sum_probs=65.2
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (210)
++|..-.-|+.|.++|..++.+|++++.+-+...+... .+..|++. ++ +++ ++.++. +...+.-
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~---~~~~g~~~--~~---~l~-------ell~~a-DvV~l~~ 228 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPEL---EKETGAKF--VE---DLN-------EMLPKC-DVIVINM 228 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHH---HHHHCCEE--CS---CHH-------HHGGGC-SEEEECS
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHH---HHhCCCeE--cC---CHH-------HHHhcC-CEEEECC
Confidence 56777889999999999999999997766544333333 33456543 21 232 233444 4444432
Q ss_pred CCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhH--HHHHHHHHHh
Q 028372 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGT--VTGAGRFLKE 197 (210)
Q Consensus 150 ~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~--~~Gi~~~~k~ 197 (210)
-.++.+ ...+..+.+.++ +++.+++-++.|+. -..+..++++
T Consensus 229 Plt~~t----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~ 272 (351)
T 3jtm_A 229 PLTEKT----RGMFNKELIGKL--KKGVLIVNNARGAIMERQAVVDAVES 272 (351)
T ss_dssp CCCTTT----TTCBSHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCCHHH----HHhhcHHHHhcC--CCCCEEEECcCchhhCHHHHHHHHHh
Confidence 222222 122345777777 47899999999886 3556666655
No 431
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=52.08 E-value=49 Score=27.24 Aligned_cols=45 Identities=18% Similarity=0.064 Sum_probs=33.8
Q ss_pred CchHHHHHHHHHHcCCcEEEEEcCCCC----HHHHHHHHH------cCCEEEEEC
Q 028372 78 GNTGVGLAFIAAARGYNLIIVMPSTCS----MERRIVLRA------LGAEIILAD 122 (210)
Q Consensus 78 GN~g~alA~~a~~~g~~~~vvvp~~~~----~~~~~~~~~------~Ga~v~~v~ 122 (210)
.|.+.+++.++.++|.+++++.|+.-. +.-.+.++. .|+++..+.
T Consensus 172 ~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~ 226 (328)
T 3grf_A 172 NNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFH 226 (328)
T ss_dssp SHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEES
T ss_pred cchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEc
Confidence 689999999999999999999998532 333333332 688887775
No 432
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=51.82 E-value=55 Score=25.83 Aligned_cols=33 Identities=27% Similarity=0.320 Sum_probs=28.2
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
++.+|+..+|.-|.+++......|.+++++...
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 467899999999999999988889998887654
No 433
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=51.82 E-value=21 Score=28.55 Aligned_cols=85 Identities=15% Similarity=0.033 Sum_probs=42.8
Q ss_pred eEEEeeCCCchHHHHHHHHHHc---CCcEEEEEcCCCCHHHH---HHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAAR---GYNLIIVMPSTCSMERR---IVLRALGAEIILADSALRFEEILEKGEEILKKTPD 143 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~---g~~~~vvvp~~~~~~~~---~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~ 143 (210)
..++..++|..+..++..+-.. +-.-.|+++....+... +.++..|++++.++.+.+..-..+..++..++...
T Consensus 61 ~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~ 140 (382)
T 4hvk_A 61 GTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTI 140 (382)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCTTEE
T ss_pred CeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhccCce
Confidence 4577777777777666654431 22234555554444333 34455799999988542210001112222223334
Q ss_pred eEEcCCCCCCh
Q 028372 144 GYLLRQFENPA 154 (210)
Q Consensus 144 ~~~~~~~~n~~ 154 (210)
.+++....||.
T Consensus 141 ~v~~~~~~npt 151 (382)
T 4hvk_A 141 LVSVQHANNEI 151 (382)
T ss_dssp EEECCSBCTTT
T ss_pred EEEEECCCCCc
Confidence 66666555554
No 434
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=51.77 E-value=23 Score=28.08 Aligned_cols=40 Identities=18% Similarity=0.136 Sum_probs=28.8
Q ss_pred hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372 162 TTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV 208 (210)
Q Consensus 162 t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~ 208 (210)
..+.+++++ .+|+|++. ++.+..|+..++++.+ +.|||+-
T Consensus 172 ~~a~~ll~~---~~daI~~~--~D~~a~Gv~~a~~e~G--v~viG~D 211 (296)
T 2hqb_A 172 ELFQELQKE---QVDVFYPA--GDGYHVPVVEAIKDQG--DFAIGYV 211 (296)
T ss_dssp HHHHHHHTT---TCCEEECC--CTTTHHHHHHHHHHHT--CEEEEEE
T ss_pred HHHHHHHHC---CCcEEEEC--CCCCCHHHHHHHHHcC--CEEEEEe
Confidence 345566543 48999876 5556679999999877 8888874
No 435
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=51.62 E-value=79 Score=24.19 Aligned_cols=43 Identities=16% Similarity=0.002 Sum_probs=32.2
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC-CCEEEEEE
Q 028372 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP-DIKVVLRV 208 (210)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~-~~~vigv~ 208 (210)
...+++++- ++||+||+. +..++.|+..++++.+- ++.|+|+-
T Consensus 185 ~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~di~vig~d 228 (293)
T 3l6u_A 185 VMRQVIDSG-IPFDAVYCH--NDDIAMGVLEALKKAKISGKIVVGID 228 (293)
T ss_dssp HHHHHHHTT-CCCSEEEES--SHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred HHHHHHHhC-CCCCEEEEC--CchHHHHHHHHHHhCCCCCeEEEEec
Confidence 344555543 578999986 66778899999998865 88888864
No 436
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=51.35 E-value=52 Score=25.42 Aligned_cols=87 Identities=14% Similarity=0.084 Sum_probs=48.0
Q ss_pred cEEEEEcCCC--CHHHHHHHHHcCCEEEEECCCC-CHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHh
Q 028372 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSAL-RFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQD 170 (210)
Q Consensus 94 ~~~vvvp~~~--~~~~~~~~~~~Ga~v~~v~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q 170 (210)
++++|+-... -..-.+.+...|++|+.+.... +.+...+.+.++.+......++ +. |... ......+..++.++
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~-Dv~d-~~~v~~~~~~~~~~ 88 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALY-QS-DLSN-EEEVAKLFDFAEKE 88 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEE-EC-CCCS-HHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEE-EC-CCCC-HHHHHHHHHHHHHH
Confidence 4555555432 2344566667899999876432 1223333444443333222222 22 2222 23345566778888
Q ss_pred hCCCCCEEEEccCc
Q 028372 171 SGGKVDAFISGIGT 184 (210)
Q Consensus 171 ~~~~~d~vv~pvG~ 184 (210)
+ +++|.+|..+|.
T Consensus 89 ~-g~iD~lvnnAg~ 101 (262)
T 3ksu_A 89 F-GKVDIAINTVGK 101 (262)
T ss_dssp H-CSEEEEEECCCC
T ss_pred c-CCCCEEEECCCC
Confidence 7 679999999884
No 437
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=50.97 E-value=61 Score=26.26 Aligned_cols=106 Identities=15% Similarity=0.050 Sum_probs=63.5
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (210)
+++..-..|+.|.++|..++.+|++++++-+.+.... ....+|++. ++ +.++ +.++. +...+.-
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~---~~~~~g~~~--~~---~l~e-------ll~~a-DvVil~~ 210 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS---DEASYQATF--HD---SLDS-------LLSVS-QFFSLNA 210 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH---HHHHHTCEE--CS---SHHH-------HHHHC-SEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh---hhhhcCcEE--cC---CHHH-------HHhhC-CEEEEec
Confidence 4566778899999999999999998776654132332 234567753 21 2322 23333 4444432
Q ss_pred CCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhH--HHHHHHHHHh
Q 028372 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGT--VTGAGRFLKE 197 (210)
Q Consensus 150 ~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~--~~Gi~~~~k~ 197 (210)
..++.. . ..+..+.++.+ +++.+++-+|+|+. ...+..++++
T Consensus 211 p~~~~t--~--~~i~~~~l~~m--k~gailIn~arg~~vd~~aL~~aL~~ 254 (320)
T 1gdh_A 211 PSTPET--R--YFFNKATIKSL--PQGAIVVNTARGDLVDNELVVAALEA 254 (320)
T ss_dssp CCCTTT--T--TCBSHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred cCchHH--H--hhcCHHHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 222221 1 12224556666 46899999999975 4467777765
No 438
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=50.88 E-value=72 Score=26.13 Aligned_cols=104 Identities=22% Similarity=0.166 Sum_probs=64.4
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ 149 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (210)
++|....-|+.|.++|..++.+|++++++-+.. +.. ....+|++. + +.+ ++.++. +...+.-
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~---~~~~~g~~~--~----~l~-------ell~~a-DvV~l~~ 227 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPII-SPE---VSASFGVQQ--L----PLE-------EIWPLC-DFITVHT 227 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS-CHH---HHHHTTCEE--C----CHH-------HHGGGC-SEEEECC
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCc-chh---hhhhcCcee--C----CHH-------HHHhcC-CEEEEec
Confidence 456677889999999999999999987765432 322 345678753 1 132 233333 4444432
Q ss_pred CCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHHH--HHHHHHHh
Q 028372 150 FENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVT--GAGRFLKE 197 (210)
Q Consensus 150 ~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~--Gi~~~~k~ 197 (210)
..++.. . ..+..++++++ +++.+++-+|+|+..- .+..++++
T Consensus 228 P~t~~t--~--~li~~~~l~~m--k~gailIN~arg~vvd~~aL~~aL~~ 271 (335)
T 2g76_A 228 PLLPST--T--GLLNDNTFAQC--KKGVRVVNCARGGIVDEGALLRALQS 271 (335)
T ss_dssp CCCTTT--T--TSBCHHHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred CCCHHH--H--HhhCHHHHhhC--CCCcEEEECCCccccCHHHHHHHHHh
Confidence 222222 1 12234666666 4689999999998644 66777765
No 439
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=50.85 E-value=18 Score=29.66 Aligned_cols=31 Identities=23% Similarity=0.303 Sum_probs=27.2
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
..|..-.+|..|.+.|..+...|++++++=+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~ 37 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 4577788999999999999999999998844
No 440
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=50.78 E-value=54 Score=22.00 Aligned_cols=47 Identities=17% Similarity=0.203 Sum_probs=31.8
Q ss_pred EEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHH-HcCCEEEEE
Q 028372 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLR-ALGAEIILA 121 (210)
Q Consensus 72 vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~-~~Ga~v~~v 121 (210)
++....|+.|..+|......|.+++++-+ .+.+.+.++ .+|.+++..
T Consensus 7 i~IiG~G~iG~~~a~~L~~~g~~v~~~d~---~~~~~~~~~~~~~~~~~~~ 54 (140)
T 1lss_A 7 IIIAGIGRVGYTLAKSLSEKGHDIVLIDI---DKDICKKASAEIDALVING 54 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHCSSEEEES
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEEC---CHHHHHHHHHhcCcEEEEc
Confidence 44456799999999998889999887754 234444444 346665443
No 441
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=50.69 E-value=30 Score=29.56 Aligned_cols=51 Identities=18% Similarity=0.018 Sum_probs=37.1
Q ss_pred HHHHHHHHHHH-HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 50 RIAYSMIKDAE-DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 50 R~a~~~~~~a~-~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
|++.+.+..+. +.|.--.+ ++++....||-|..+|.....+|.+++.+.+.
T Consensus 191 ~Gv~~~~~~~~~~~g~~l~g-k~vaVqG~GnVG~~aa~~L~e~GakVVavsD~ 242 (421)
T 1v9l_A 191 FGVAVATREMAKKLWGGIEG-KTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI 242 (421)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-CEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCcCC-CEEEEECcCHHHHHHHHHHHHCCCEEEEEECC
Confidence 57777766654 34432223 56777888999999999999999999977765
No 442
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=50.66 E-value=10 Score=31.10 Aligned_cols=43 Identities=23% Similarity=0.208 Sum_probs=32.1
Q ss_pred HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC
Q 028372 60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC 103 (210)
Q Consensus 60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~ 103 (210)
++.|.+. |.+..+..-.+|.+.+++.++.++|.+++++.|+.-
T Consensus 147 e~~g~l~-glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~ 189 (309)
T 4f2g_A 147 EHRGPIR-GKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGY 189 (309)
T ss_dssp HHHSCCT-TCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGG
T ss_pred HHhCCCC-CCEEEEECCCcchHHHHHHHHHHcCCEEEEECCccc
Confidence 3456544 335445555589999999999999999999999753
No 443
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=50.62 E-value=30 Score=29.39 Aligned_cols=44 Identities=14% Similarity=0.147 Sum_probs=32.6
Q ss_pred chHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHH----HHHcCCEEEEEC
Q 028372 79 NTGVGLAFIAAARGYNLIIVMPSTC--SMERRIV----LRALGAEIILAD 122 (210)
Q Consensus 79 N~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~----~~~~Ga~v~~v~ 122 (210)
|.+.++..++..+|++++++.|+.. ++.-++. .+..|+++..+.
T Consensus 209 nVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~ 258 (399)
T 3q98_A 209 SVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVT 258 (399)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 7889999999999999999999853 4443332 235677776654
No 444
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=50.29 E-value=50 Score=24.74 Aligned_cols=51 Identities=20% Similarity=0.133 Sum_probs=35.0
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHH-HHHHcCCEEEEECC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRI-VLRALGAEIILADS 123 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~-~~~~~Ga~v~~v~~ 123 (210)
..+|+..+|.-|.++|..-...|.+++++... ..+.+ ..+.++.++..+..
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~ 54 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRS---ESKLSTVTNCLSNNVGYRAR 54 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESC---HHHHHHHHHTCSSCCCEEEC
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHhhccCeEee
Confidence 46888999999999999988999997776543 23333 33445655555443
No 445
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=50.24 E-value=59 Score=28.35 Aligned_cols=50 Identities=14% Similarity=0.240 Sum_probs=31.9
Q ss_pred eEEEeeCCCchH-HHHHHH--HHHcCCcEEEEEcCCC-CH---HHHHHHHHcCCEEE
Q 028372 70 TTLIEVTSGNTG-VGLAFI--AAARGYNLIIVMPSTC-SM---ERRIVLRALGAEII 119 (210)
Q Consensus 70 ~~vv~~ssGN~g-~alA~~--a~~~g~~~~vvvp~~~-~~---~~~~~~~~~Ga~v~ 119 (210)
+.+|.+..||.| -+++.+ -+..|++++++.+... +. ...+.++.+|..+.
T Consensus 54 ~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 54 RFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 556667777766 344433 4445999999987643 32 34566777887665
No 446
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=50.19 E-value=66 Score=26.07 Aligned_cols=49 Identities=10% Similarity=0.099 Sum_probs=28.6
Q ss_pred eEEEeeCCCchH---HHHHHHHHHcCCcEEEEEcCCC--CH---HHHHHHHHcCCEE
Q 028372 70 TTLIEVTSGNTG---VGLAFIAAARGYNLIIVMPSTC--SM---ERRIVLRALGAEI 118 (210)
Q Consensus 70 ~~vv~~ssGN~g---~alA~~a~~~g~~~~vvvp~~~--~~---~~~~~~~~~Ga~v 118 (210)
+.+|.++.||.| .++|...+..|++++++.+... .. ...+.++..|..+
T Consensus 134 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~~~~~~~a~~~~~~~~~~g~~~ 190 (306)
T 3d3j_A 134 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSLFSKTQGQQ 190 (306)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCCCSSCCHHHHHHHHHHHTSSCEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEecCCCCCHHHHHHHHHHHHcCCcc
Confidence 456666677665 3344445567999999977532 21 2344445566654
No 447
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=50.09 E-value=43 Score=26.63 Aligned_cols=46 Identities=22% Similarity=0.032 Sum_probs=35.0
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEE
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEI 118 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v 118 (210)
.+|..-..|+.|.++|......|++++++ +..+.+.+.+...|+..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~---dr~~~~~~~~~~~g~~~ 53 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGA---DLNPQACANLLAEGACG 53 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHTTCSE
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEE---ECCHHHHHHHHHcCCcc
Confidence 34666689999999999999999998877 33566666666666654
No 448
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=49.97 E-value=48 Score=26.89 Aligned_cols=83 Identities=12% Similarity=0.028 Sum_probs=41.8
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEECCCCCHH-HHHHHHHHHHHhCCCeEE
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADSALRFE-EILEKGEEILKKTPDGYL 146 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~~~~~~~-~~~~~a~~~~~~~~~~~~ 146 (210)
..++..++|..+..++..+- ..-.-.++++...- ..-...++..|++++.++.+.+.. +.....+.+.+.....++
T Consensus 65 ~~v~~~~sgt~al~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~ 143 (411)
T 3nnk_A 65 WTMLVDGTSRAGIEAILVSA-IRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLL 143 (411)
T ss_dssp EEEEEESCHHHHHHHHHHHH-CCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEE
T ss_pred cEEEECCCcHHHHHHHHHHh-cCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEE
Confidence 33565666676666666554 22222333333322 225666788999999887542211 111222223222446676
Q ss_pred cCCCCCC
Q 028372 147 LRQFENP 153 (210)
Q Consensus 147 ~~~~~n~ 153 (210)
+....||
T Consensus 144 ~~~~~np 150 (411)
T 3nnk_A 144 TVQGDTS 150 (411)
T ss_dssp EESEETT
T ss_pred EeCCCCC
Confidence 6543444
No 449
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=49.77 E-value=46 Score=26.62 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=32.2
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCE
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAE 117 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~ 117 (210)
.+|..-..|+.|.++|......|.+++++-+ .+.+.+.+...|++
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr---~~~~~~~l~~~g~~ 66 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNR---TLSKCDELVEHGAS 66 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS---SGGGGHHHHHTTCE
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHCCCe
Confidence 4566778999999999999999998887743 23444444445543
No 450
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=49.38 E-value=1.3e+02 Score=31.83 Aligned_cols=60 Identities=20% Similarity=0.271 Sum_probs=43.3
Q ss_pred CCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-C----HHHHHHHHHcCCEEEEECCC
Q 028372 65 ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-S----MERRIVLRALGAEIILADSA 124 (210)
Q Consensus 65 ~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~----~~~~~~~~~~Ga~v~~v~~~ 124 (210)
+.+++..+|+..+|-.|.++|..-...|.+.++++..+. . ....+.++..|++++.+..+
T Consensus 1881 ~~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~D 1945 (2512)
T 2vz8_A 1881 CPPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSN 1945 (2512)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecC
Confidence 345567888988999999999998889998666665432 2 23345566779998877653
No 451
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=49.37 E-value=31 Score=26.78 Aligned_cols=33 Identities=12% Similarity=0.154 Sum_probs=26.1
Q ss_pred CCCCEEEEccCchhHHHHHHHHHHhcC---C-CCEEEEE
Q 028372 173 GKVDAFISGIGTGGTVTGAGRFLKENN---P-DIKVVLR 207 (210)
Q Consensus 173 ~~~d~vv~pvG~Gg~~~Gi~~~~k~~~---~-~~~vigv 207 (210)
++||+||+. +..++.|+..++++.+ | ++.|+|+
T Consensus 196 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~ 232 (293)
T 2iks_A 196 PMPQALFTT--SFALLQGVMDVTLRRDGKLPSDLAIATF 232 (293)
T ss_dssp CCCSEEEES--SHHHHHHHHHHHHHHHSSCCSSCEEEEE
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEE
Confidence 468999985 6677889999998764 3 6888886
No 452
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=49.31 E-value=54 Score=25.84 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=21.3
Q ss_pred eEEEeeCCCchH---HHHHHHHHHcCCcEEEEEcC
Q 028372 70 TTLIEVTSGNTG---VGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 70 ~~vv~~ssGN~g---~alA~~a~~~g~~~~vvvp~ 101 (210)
+.+|.+..||.| .++|..-+..|++++++.+.
T Consensus 87 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 87 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEec
Confidence 456666777765 33444455679999999764
No 453
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=49.28 E-value=27 Score=27.11 Aligned_cols=32 Identities=16% Similarity=0.154 Sum_probs=27.5
Q ss_pred eEEEeeCCCchHHHHHHHHHHc-CCcEEEEEcC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAAR-GYNLIIVMPS 101 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~-g~~~~vvvp~ 101 (210)
+.+|+.++|..|.+++...... |.+++++...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~ 34 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRN 34 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESS
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECC
Confidence 4688999999999999997776 9999998864
No 454
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=49.28 E-value=95 Score=24.45 Aligned_cols=31 Identities=32% Similarity=0.371 Sum_probs=26.2
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+.+|+..+|.-|.+++......|.+++++..
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 3 KLLITGGCGFLGSNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEeCCCchhHHHHHHHHHhCCCEEEEEeC
Confidence 5688888999999999888888998888764
No 455
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=49.27 E-value=43 Score=26.28 Aligned_cols=33 Identities=18% Similarity=0.082 Sum_probs=29.0
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
++.+|+..+|.-|..++......|.+++++...
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 367889999999999999998899999988765
No 456
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=49.10 E-value=33 Score=28.89 Aligned_cols=49 Identities=16% Similarity=0.076 Sum_probs=37.4
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v 121 (210)
.+|+.-..|..|...|..++.+|.+++++=+ .+.+++.++.+|++.+.+
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~---~~~~l~~~~~lGa~~~~l 233 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDV---RPEVAEQVRSVGAQWLDL 233 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECS---SGGGHHHHHHTTCEECCC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCeEEec
Confidence 4577778899999999999999998665422 355677777899987643
No 457
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=49.09 E-value=74 Score=24.13 Aligned_cols=50 Identities=20% Similarity=0.186 Sum_probs=33.9
Q ss_pred eEEEeeCCCchHH-HHHHHHHHcCCcEEEEEcCC----CC----HHHHHHHHHcCCEEE
Q 028372 70 TTLIEVTSGNTGV-GLAFIAAARGYNLIIVMPST----CS----MERRIVLRALGAEII 119 (210)
Q Consensus 70 ~~vv~~ssGN~g~-alA~~a~~~g~~~~vvvp~~----~~----~~~~~~~~~~Ga~v~ 119 (210)
+.+++.-..+.+. +.|..|..+|++++++.+-. .. ..-++.|+..|++++
T Consensus 156 ~l~i~G~~t~~CV~~Ta~~a~~~g~~v~v~~Da~~~~~~~~~~~~~al~~m~~~Gv~i~ 214 (216)
T 3v8e_A 156 EVYIVGVALEYXVKATAISAAELGYKTTVLLDYTRPISDDPEVINKVKEELKAHNINVV 214 (216)
T ss_dssp EEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEEEeccccHHHHHHHHHHHCCCEEEEeccccCCCCcccHHHHHHHHHHHHcCCEEe
Confidence 5566666666665 46666888999999887631 11 234677888898875
No 458
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=49.05 E-value=93 Score=27.81 Aligned_cols=32 Identities=31% Similarity=0.431 Sum_probs=28.5
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
..|+.-.+|..|.+.|..+++.|.+++++=..
T Consensus 374 ~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 405 (671)
T 1ps9_A 374 KNLAVVGAGPAGLAFAINAAARGHQVTLFDAH 405 (671)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 56888999999999999999999999988764
No 459
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=48.92 E-value=38 Score=25.58 Aligned_cols=33 Identities=18% Similarity=0.356 Sum_probs=26.9
Q ss_pred CCCCEEEEccCchhHHHHHHHHHHhcC-CCCEEEEE
Q 028372 173 GKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVVLR 207 (210)
Q Consensus 173 ~~~d~vv~pvG~Gg~~~Gi~~~~k~~~-~~~~vigv 207 (210)
++||+|||. +..++.|+..++++.+ .++.|+|+
T Consensus 171 ~~~~ai~~~--~d~~A~g~~~al~~~g~~di~vig~ 204 (255)
T 1byk_A 171 PETTALLCA--TDTLALGASKYLQEQRIDTLQLASV 204 (255)
T ss_dssp TTCCEEEES--SHHHHHHHHHHHHHTTCCSCEEEEE
T ss_pred CCCCEEEEe--ChHHHHHHHHHHHHcCCCcEEEEEe
Confidence 468999985 6678889999998876 58888886
No 460
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=48.80 E-value=45 Score=27.73 Aligned_cols=51 Identities=22% Similarity=0.222 Sum_probs=37.8
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC------CH----HHHHHHHHcCCEEEE
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC------SM----ERRIVLRALGAEIIL 120 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~------~~----~~~~~~~~~Ga~v~~ 120 (210)
+.++.-.+|+.|.-+|...+.+|.+++++.+... ++ .-.+.++..|.+++.
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~ 206 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRF 206 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEe
Confidence 4577788999999999999999999999987542 11 224456677777653
No 461
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=48.78 E-value=22 Score=28.45 Aligned_cols=32 Identities=22% Similarity=0.342 Sum_probs=27.8
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
..|+.-.+|-.|.++|+..++.|++++++=..
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 45788899999999999999999999988543
No 462
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=48.67 E-value=74 Score=24.95 Aligned_cols=31 Identities=23% Similarity=0.312 Sum_probs=25.4
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
++|..-..|+.|.++|...+..|++++++-+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 3455668899999999999999999888643
No 463
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=48.56 E-value=91 Score=24.00 Aligned_cols=43 Identities=21% Similarity=0.203 Sum_probs=31.7
Q ss_pred HHHHHHHhhC-CCCCEEEEccCchhHHHHHHHHHHhcCC-CCEEEEE
Q 028372 163 TGPEIWQDSG-GKVDAFISGIGTGGTVTGAGRFLKENNP-DIKVVLR 207 (210)
Q Consensus 163 ~~~Ei~~q~~-~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~-~~~vigv 207 (210)
...+++++.+ +.||+||+. +..++.|+..++++.+. ++.|+|+
T Consensus 191 ~~~~~l~~~~~~~~~ai~~~--~d~~a~g~~~al~~~g~~di~vig~ 235 (309)
T 2fvy_A 191 KMDAWLSGPNANKIEVVIAN--NDAMAMGAVEALKAHNKSSIPVFGV 235 (309)
T ss_dssp HHHHHHTSTTGGGCCEEEES--SHHHHHHHHHHHHHTTCTTSCEECS
T ss_pred HHHHHHHhCCCCCccEEEEC--CchhHHHHHHHHHHcCCCCceEEec
Confidence 3455555432 268999985 66788899999999887 8888875
No 464
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=48.23 E-value=31 Score=29.44 Aligned_cols=52 Identities=10% Similarity=0.043 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372 50 RIAYSMIKDAED-KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST 102 (210)
Q Consensus 50 R~a~~~~~~a~~-~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~ 102 (210)
|++.+.+..+.+ .|. ....++|+....||-|..+|.....+|.+++.+.+.+
T Consensus 193 ~Gv~~~~~~~~~~~g~-~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~ 245 (421)
T 2yfq_A 193 FGVAVVVRESAKRFGI-KMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWD 245 (421)
T ss_dssp HHHHHHHHHHHHHTTC-CGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCC
T ss_pred HHHHHHHHHHHHhcCC-CccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecC
Confidence 677777766544 443 2223567888899999999999999999998777655
No 465
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=48.08 E-value=19 Score=29.63 Aligned_cols=31 Identities=23% Similarity=0.428 Sum_probs=27.0
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
..|+.-.+|-.|.++|+..++.|++++++=.
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~ 35 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLER 35 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 3578889999999999999999999888754
No 466
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=47.91 E-value=89 Score=23.72 Aligned_cols=47 Identities=21% Similarity=0.217 Sum_probs=34.0
Q ss_pred HHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCCEEEEE
Q 028372 157 KIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVVLR 207 (210)
Q Consensus 157 ~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~----~~~~vigv 207 (210)
..++ ....+++++- ++||+||+. +..++.|+..++++.+ .++.|+|+
T Consensus 161 ~~~~-~~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~ 211 (280)
T 3gyb_A 161 HAGY-TETLALLKEH-PEVTAIFSS--NDITAIGALGAARELGLRVPEDLSIIGY 211 (280)
T ss_dssp HHHH-HHHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHHTCCTTTTCEEEEE
T ss_pred HHHH-HHHHHHHhCC-CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCeeEEEEE
Confidence 3344 3445666654 679999986 5678889999999876 36888886
No 467
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=47.82 E-value=20 Score=29.67 Aligned_cols=32 Identities=16% Similarity=0.165 Sum_probs=28.1
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
..|+...+|-.|.++|+..++.|++++++=..
T Consensus 24 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 24 MKAIVIGAGIGGLSAAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 45888899999999999999999999888554
No 468
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=47.76 E-value=53 Score=26.66 Aligned_cols=82 Identities=11% Similarity=0.037 Sum_probs=40.8
Q ss_pred EEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCH--HHHHHHHHcCCEEEEECCCCCHH-HHHHHHHHHHHhCCCeEEcC
Q 028372 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSM--ERRIVLRALGAEIILADSALRFE-EILEKGEEILKKTPDGYLLR 148 (210)
Q Consensus 72 vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~--~~~~~~~~~Ga~v~~v~~~~~~~-~~~~~a~~~~~~~~~~~~~~ 148 (210)
++..++|..+..++..+- ..-.-.|+++...-. .-...++..|++++.++.+.+.. +..+..+.+.+.....+++.
T Consensus 65 ~~~~~s~t~al~~~~~~l-~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 143 (416)
T 3isl_A 65 YPIDGTSRAGIEAVLASV-IEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMV 143 (416)
T ss_dssp EEEESCHHHHHHHHHHHH-CCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEE
T ss_pred EEecCcHHHHHHHHHHHh-cCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEE
Confidence 445666666666665544 322223444433322 24456788899999887542111 11122222332344666665
Q ss_pred CCCCCh
Q 028372 149 QFENPA 154 (210)
Q Consensus 149 ~~~n~~ 154 (210)
...||.
T Consensus 144 ~~~npt 149 (416)
T 3isl_A 144 HGETST 149 (416)
T ss_dssp SEETTT
T ss_pred ccCCCC
Confidence 544543
No 469
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=47.68 E-value=26 Score=24.34 Aligned_cols=48 Identities=13% Similarity=0.155 Sum_probs=29.9
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHH-HHHHcCCEEEE
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRI-VLRALGAEIIL 120 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~-~~~~~Ga~v~~ 120 (210)
+++....+|+.|.+++...+..|.++++ ...+ +.+.+ ..+.+|.++..
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v-~~r~--~~~~~~~a~~~~~~~~~ 70 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTV-AGRN--IDHVRAFAEKYEYEYVL 70 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEE-EESC--HHHHHHHHHHHTCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEE-EcCC--HHHHHHHHHHhCCceEe
Confidence 3455566799999999988888988443 3332 33332 34556665543
No 470
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=47.68 E-value=1.2e+02 Score=25.09 Aligned_cols=85 Identities=13% Similarity=0.201 Sum_probs=47.6
Q ss_pred HHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHhhCC-CCCEEEEcc
Q 028372 105 MERRIVLRALGA-EIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGG-KVDAFISGI 182 (210)
Q Consensus 105 ~~~~~~~~~~Ga-~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~-~~d~vv~pv 182 (210)
..-.+..+.+|+ +|+.++.+ ++..+.++++- -...++. .+.. ...+|.+..++ .+|.||-++
T Consensus 227 ~~aiqlak~~Ga~~Vi~~~~~---~~~~~~~~~lG----a~~vi~~-~~~~--------~~~~i~~~t~g~g~D~vid~~ 290 (404)
T 3ip1_A 227 LAAVAILKHAGASKVILSEPS---EVRRNLAKELG----ADHVIDP-TKEN--------FVEAVLDYTNGLGAKLFLEAT 290 (404)
T ss_dssp HHHHHHHHHTTCSEEEEECSC---HHHHHHHHHHT----CSEEECT-TTSC--------HHHHHHHHTTTCCCSEEEECS
T ss_pred HHHHHHHHHcCCCEEEEECCC---HHHHHHHHHcC----CCEEEcC-CCCC--------HHHHHHHHhCCCCCCEEEECC
Confidence 345677788999 89988864 44555555542 2223332 2221 22344444433 599999999
Q ss_pred Cch-hHHHHHHHHH-HhcCCCCEEE
Q 028372 183 GTG-GTVTGAGRFL-KENNPDIKVV 205 (210)
Q Consensus 183 G~G-g~~~Gi~~~~-k~~~~~~~vi 205 (210)
|+. .++..+...+ +...+.=+++
T Consensus 291 g~~~~~~~~~~~~l~~~~~~~G~iv 315 (404)
T 3ip1_A 291 GVPQLVWPQIEEVIWRARGINATVA 315 (404)
T ss_dssp SCHHHHHHHHHHHHHHCSCCCCEEE
T ss_pred CCcHHHHHHHHHHHHhccCCCcEEE
Confidence 987 3554554544 2224554544
No 471
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=47.59 E-value=71 Score=28.02 Aligned_cols=119 Identities=11% Similarity=0.043 Sum_probs=65.0
Q ss_pred HHHHHHHcCCcEEEEEc------CCCCH-----HHHHHHHHcCCEEEEECCC---CCH-HHHHHHHHHHHHhCCCe-EEc
Q 028372 84 LAFIAAARGYNLIIVMP------STCSM-----ERRIVLRALGAEIILADSA---LRF-EEILEKGEEILKKTPDG-YLL 147 (210)
Q Consensus 84 lA~~a~~~g~~~~vvvp------~~~~~-----~~~~~~~~~Ga~v~~v~~~---~~~-~~~~~~a~~~~~~~~~~-~~~ 147 (210)
+...|+..|.++++-.- .+..+ ......-..|++-+...++ +.| .++.....+.+++.+.. .|-
T Consensus 298 ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~ 377 (511)
T 3gg8_A 298 MIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETANGEFPVITVETMARICYEAETCVDYP 377 (511)
T ss_dssp HHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCHHHHHHHHHHHHHHHHhchhHH
Confidence 34578999988776421 11112 2233334569988877542 122 34555444444322111 110
Q ss_pred C-------CCCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372 148 R-------QFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV 208 (210)
Q Consensus 148 ~-------~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~ 208 (210)
. ....+.......+..+.++.+++ +..+||+..-||.|+ +.+....|.+.|++++
T Consensus 378 ~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l--~a~aIv~~T~SG~tA----~~iSr~RP~~PIia~T 439 (511)
T 3gg8_A 378 ALYRAMCLAVPPPISTQEAVARAAVETAECV--NAAIILALTETGQTA----RLIAKYRPMQPILALS 439 (511)
T ss_dssp HHHHHHHHHSCSCCCHHHHHHHHHHHHHHHH--TCSEEEEECSSSHHH----HHHHHTCCSSCEEEEE
T ss_pred HHHhhhhhcccCCCCHHHHHHHHHHHHHHhc--CCCEEEEECCCchHH----HHHHhhCCCCCEEEEc
Confidence 0 00111121223344456777777 468999999999984 4455578999999986
No 472
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=47.43 E-value=93 Score=23.79 Aligned_cols=43 Identities=26% Similarity=0.185 Sum_probs=32.1
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC-CCEEEEEE
Q 028372 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP-DIKVVLRV 208 (210)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~-~~~vigv~ 208 (210)
...+++++- ++||+|||. +..++.|+..++++.+- ++.|+|+-
T Consensus 173 ~~~~ll~~~-~~~~ai~~~--nD~~A~g~~~al~~~G~~di~viG~D 216 (283)
T 2ioy_A 173 VMENILQAQ-PKIDAVFAQ--NDEMALGAIKAIEAANRQGIIVVGFD 216 (283)
T ss_dssp HHHHHHHHC-SCCCEEEES--SHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred HHHHHHHhC-CCccEEEEC--CchHHHHHHHHHHHCCCCCcEEEEeC
Confidence 345666543 578999886 55678899999998764 89999874
No 473
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=47.39 E-value=1.1e+02 Score=24.77 Aligned_cols=108 Identities=13% Similarity=0.049 Sum_probs=0.0
Q ss_pred CeEEEeeCCCch-----HHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCC
Q 028372 69 KTTLIEVTSGNT-----GVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPD 143 (210)
Q Consensus 69 ~~~vv~~ssGN~-----g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~ 143 (210)
++.|+.+++|.- +.|+|-.-+..|.+++.+..+.-...++ +...|-+++.++... .++
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~--v~~~g~~~~~i~~~~---------------~~~ 64 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDL--VPKAGLPLHLIQVSG---------------LRG 64 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHH--TGGGTCCEEECC---------------------
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhch--hhhcCCcEEEEECCC---------------cCC
Q ss_pred eEEcCCCCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHH
Q 028372 144 GYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLK 196 (210)
Q Consensus 144 ~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k 196 (210)
..+......+.. ....-.-...++++. +||.|+.-.|--+....++..+.
T Consensus 65 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~--~PDvVi~~g~~~s~p~~laA~~~ 114 (365)
T 3s2u_A 65 KGLKSLVKAPLE-LLKSLFQALRVIRQL--RPVCVLGLGGYVTGPGGLAARLN 114 (365)
T ss_dssp --------CHHH-HHHHHHHHHHHHHHH--CCSEEEECSSSTHHHHHHHHHHT
T ss_pred CCHHHHHHHHHH-HHHHHHHHHHHHHhc--CCCEEEEcCCcchHHHHHHHHHc
No 474
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=47.36 E-value=27 Score=28.04 Aligned_cols=54 Identities=7% Similarity=0.022 Sum_probs=32.0
Q ss_pred EEEeeCCCchHHHHHHHHHHc---CCcEEEEEcCCCCHHHH---HHHHHcCCEEEEECCC
Q 028372 71 TLIEVTSGNTGVGLAFIAAAR---GYNLIIVMPSTCSMERR---IVLRALGAEIILADSA 124 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~~---g~~~~vvvp~~~~~~~~---~~~~~~Ga~v~~v~~~ 124 (210)
.++..++|..+..++..+-.. .-.-.|+++...-.... ..++..|++++.++.+
T Consensus 63 ~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 122 (384)
T 1eg5_A 63 EIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVD 122 (384)
T ss_dssp GEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBC
T ss_pred eEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccC
Confidence 466677777777776665541 11224555554444332 2347789999988753
No 475
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=47.26 E-value=87 Score=27.82 Aligned_cols=30 Identities=20% Similarity=0.258 Sum_probs=23.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIV 98 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vv 98 (210)
+..+||..++--|+++|..-...|.++++.
T Consensus 9 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~ 38 (604)
T 2et6_A 9 KVVIITGAGGGLGKYYSLEFAKLGAKVVVN 38 (604)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEE
Confidence 467888888888888888888888887664
No 476
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=47.25 E-value=69 Score=26.87 Aligned_cols=51 Identities=20% Similarity=0.253 Sum_probs=37.4
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-----CH----HHHHHHHHcCCEEEE
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-----SM----ERRIVLRALGAEIIL 120 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-----~~----~~~~~~~~~Ga~v~~ 120 (210)
+.++...+|..|.-+|...+.+|.+++++.+... ++ .-.+.++..|.+++.
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~ 230 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVT 230 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEe
Confidence 4567778999999999999999999999987532 11 223456677776653
No 477
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=47.01 E-value=20 Score=28.40 Aligned_cols=31 Identities=19% Similarity=0.231 Sum_probs=26.7
Q ss_pred EEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
.|+...+|-.|.++|+..++.|++++++=..
T Consensus 4 dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~ 34 (336)
T 1yvv_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCcEEEEECC
Confidence 3777899999999999999999999887543
No 478
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=46.98 E-value=15 Score=29.64 Aligned_cols=83 Identities=13% Similarity=0.130 Sum_probs=41.6
Q ss_pred eEEEeeCCCchHHHHHHHHH-HcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHH-HHHHHHHHHHHhCCCeEEc
Q 028372 70 TTLIEVTSGNTGVGLAFIAA-ARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFE-EILEKGEEILKKTPDGYLL 147 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~-~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~-~~~~~a~~~~~~~~~~~~~ 147 (210)
..++..++|..+..++..+- .-|=++.+.-|.. ..-...++..|++++.++.+.++. +.....+.+.+.....+++
T Consensus 86 ~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~--~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~ 163 (367)
T 3euc_A 86 MEVLLGNGSDEIISMLALAAARPGAKVMAPVPGF--VMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYL 163 (367)
T ss_dssp CEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCS--CCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEE
T ss_pred ceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCH--HHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEE
Confidence 35666777777666655543 1233333333332 223345678999999987542211 1111222222224467777
Q ss_pred CCCCCCh
Q 028372 148 RQFENPA 154 (210)
Q Consensus 148 ~~~~n~~ 154 (210)
....||.
T Consensus 164 ~~~~npt 170 (367)
T 3euc_A 164 AYPNNPT 170 (367)
T ss_dssp ESSCTTT
T ss_pred cCCCCCC
Confidence 5445554
No 479
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=46.98 E-value=22 Score=29.09 Aligned_cols=32 Identities=16% Similarity=0.181 Sum_probs=27.9
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
..|+...+|-.|.++|...++.|++++++=..
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~ 43 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQNGWDVRLHEKS 43 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 45888899999999999999999999888543
No 480
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=46.88 E-value=64 Score=25.38 Aligned_cols=56 Identities=18% Similarity=0.186 Sum_probs=36.0
Q ss_pred CCCchhhHHHHHHHHHHHHc-CCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 43 PCSSVKDRIAYSMIKDAEDK-GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 43 ptGS~K~R~a~~~~~~a~~~-g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
+.|++=|-....... .+. +..-.+++.+|+..+|-.|.+++......|.+++++-.
T Consensus 95 ~~G~nTd~~g~~~~l--~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R 151 (287)
T 1lu9_A 95 SNGSNTTAAAGVALV--VKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGR 151 (287)
T ss_dssp STTHHHHHHHHHHHH--HHHTTSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCcCCchHHHHHHHH--HHhhccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence 678776654433322 222 32223456777777899999999999999998555543
No 481
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=46.75 E-value=57 Score=27.59 Aligned_cols=50 Identities=14% Similarity=0.195 Sum_probs=36.9
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-----C----HHHHHHHHHcCCEEE
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-----S----MERRIVLRALGAEII 119 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-----~----~~~~~~~~~~Ga~v~ 119 (210)
+.++...+|..|.-+|...+.+|.+++++.+... + ..-.+.++..|.+++
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~ 242 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFK 242 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 4577778999999999999999999999976532 1 223445566776654
No 482
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=46.73 E-value=46 Score=26.57 Aligned_cols=43 Identities=23% Similarity=0.200 Sum_probs=30.8
Q ss_pred EEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCC
Q 028372 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGA 116 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga 116 (210)
+|..-..|+.|.++|......|++++++- .++.+.+.+...|+
T Consensus 11 ~IgiIG~G~mG~~~A~~l~~~G~~V~~~d---r~~~~~~~~~~~g~ 53 (306)
T 3l6d_A 11 DVSVIGLGAMGTIMAQVLLKQGKRVAIWN---RSPGKAAALVAAGA 53 (306)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEC---SSHHHHHHHHHHTC
T ss_pred eEEEECCCHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHCCC
Confidence 35556889999999999999999988873 23445444444454
No 483
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=46.71 E-value=44 Score=27.09 Aligned_cols=53 Identities=8% Similarity=-0.051 Sum_probs=34.1
Q ss_pred EEEeeCCCchHHHHHHH-HHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 71 TLIEVTSGNTGVGLAFI-AAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~-a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
.|+..++|..+..++.- ...++-.-.|+++...-..-...++..|++++.++.
T Consensus 97 ~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 150 (397)
T 3fsl_A 97 ATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPW 150 (397)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECC
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEee
Confidence 57777888888777742 222222223445554455566778889999999875
No 484
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=46.70 E-value=68 Score=24.48 Aligned_cols=50 Identities=18% Similarity=0.179 Sum_probs=33.5
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHH-HHHcCCEEEEEC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIV-LRALGAEIILAD 122 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~-~~~~Ga~v~~v~ 122 (210)
..+|+..+|--|.++|..-...|.+++++... ..+.+. .+.++.++..+.
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~ 52 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRR---QERLQELKDELGDNLYIAQ 52 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhcCceEEEE
Confidence 46788888999999999988899988776543 222222 233455555444
No 485
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=46.69 E-value=34 Score=29.57 Aligned_cols=52 Identities=10% Similarity=-0.065 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 49 DRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 49 ~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
-|+..+.+..+.+.-......++|+.-..||-|..+|.....+|-+++.+.+
T Consensus 219 g~Gv~~~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD 270 (456)
T 3r3j_A 219 GYGVVYFAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSD 270 (456)
T ss_dssp HHHHHHHHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEEC
T ss_pred chHHHHHHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 4577777777655322233336677888899999999999999999876665
No 486
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=46.67 E-value=96 Score=23.73 Aligned_cols=87 Identities=16% Similarity=0.125 Sum_probs=47.2
Q ss_pred cEEEEEcCCC--CHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHhh
Q 028372 94 NLIIVMPSTC--SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS 171 (210)
Q Consensus 94 ~~~vvvp~~~--~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~ 171 (210)
+.++|+-... -..-.+.+...|++|+.+.... .+.......++.+......++. . |... ......+..++.+++
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-Dv~~-~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGA-AEGAATAVAEIEKLGRSALAIK-A-DLTN-AAEVEAAISAAADKF 84 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSS-CHHHHHHHHHHHTTTSCCEEEE-C-CTTC-HHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHHHhcCCceEEEE-c-CCCC-HHHHHHHHHHHHHHh
Confidence 4555555433 2345566677899999883321 2333333444433332333321 1 2222 233345667777877
Q ss_pred CCCCCEEEEccCch
Q 028372 172 GGKVDAFISGIGTG 185 (210)
Q Consensus 172 ~~~~d~vv~pvG~G 185 (210)
+.+|.+|..+|..
T Consensus 85 -g~id~lv~nAg~~ 97 (259)
T 3edm_A 85 -GEIHGLVHVAGGL 97 (259)
T ss_dssp -CSEEEEEECCCCC
T ss_pred -CCCCEEEECCCcc
Confidence 6799999998754
No 487
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=46.63 E-value=20 Score=29.16 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=27.7
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
..|+...+|-.|.++|+..++.|++++++=..
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~ 36 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 35788899999999999999999999888554
No 488
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=46.57 E-value=95 Score=23.65 Aligned_cols=43 Identities=19% Similarity=0.199 Sum_probs=31.3
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC--CCEEEEEE
Q 028372 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP--DIKVVLRV 208 (210)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~--~~~vigv~ 208 (210)
...+++++- ++||+||+. +...+.|+..++++.+- ++.|+|+-
T Consensus 180 ~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~G~~~di~vvg~d 224 (289)
T 3brs_A 180 GTVELLTKY-PDISVMVGL--NQYSATGAARAIKDMSLEAKVKLVCID 224 (289)
T ss_dssp HHHHHHHHC-TTEEEEEES--SHHHHHHHHHHHHHTTCTTTSEEEEEE
T ss_pred HHHHHHHhC-CCceEEEEC--CCcchHHHHHHHHhcCCCCCEEEEEEC
Confidence 445666543 568999875 56778899999988753 58898874
No 489
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=46.51 E-value=1e+02 Score=23.92 Aligned_cols=33 Identities=15% Similarity=0.054 Sum_probs=26.8
Q ss_pred CCCCEEEEccCchhHHHHHHHHHHhcC----CCCEEEEE
Q 028372 173 GKVDAFISGIGTGGTVTGAGRFLKENN----PDIKVVLR 207 (210)
Q Consensus 173 ~~~d~vv~pvG~Gg~~~Gi~~~~k~~~----~~~~vigv 207 (210)
++||+|||. +..++.|+..++++.+ .++.|+|+
T Consensus 196 ~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~ 232 (303)
T 3kke_A 196 DGPTAVVVA--SVNAAVGALSTALRLGLRVPEDLSIVGI 232 (303)
T ss_dssp TSCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEE
T ss_pred CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEEE
Confidence 569999986 5677889999999876 36889886
No 490
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=46.50 E-value=85 Score=27.60 Aligned_cols=119 Identities=13% Similarity=0.092 Sum_probs=65.0
Q ss_pred HHHHHHHcCCcEEEEEc------CCCCH-----HHHHHHHHcCCEEEEECCC---CCH-HHHHHHHHHHHHhCCCe-EEc
Q 028372 84 LAFIAAARGYNLIIVMP------STCSM-----ERRIVLRALGAEIILADSA---LRF-EEILEKGEEILKKTPDG-YLL 147 (210)
Q Consensus 84 lA~~a~~~g~~~~vvvp------~~~~~-----~~~~~~~~~Ga~v~~v~~~---~~~-~~~~~~a~~~~~~~~~~-~~~ 147 (210)
+...|+..|.++++-.- .+..+ ......-..|++-+...++ +.| .++.+...+.+++-+.. .|.
T Consensus 307 iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~ 386 (520)
T 3khd_A 307 MISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGETAGGKFPVEAVTIMSKICLEAEACIDYK 386 (520)
T ss_dssp HHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCcCHHHHHHHHHHHHHHHHhhhhhh
Confidence 55678999998775311 11112 2223333469988877532 122 35555544444322111 110
Q ss_pred C-------CCCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372 148 R-------QFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV 208 (210)
Q Consensus 148 ~-------~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~ 208 (210)
. ....+.......+..+.++.+++ +..+|++..-||.|+ +.+....|.+.|++++
T Consensus 387 ~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l--~a~aIv~~T~SG~TA----~~vSr~RP~~PIia~T 448 (520)
T 3khd_A 387 LLYQSLVNAIETPISVQEAVARSAVETAESI--QASLIIALTETGYTA----RLIAKYKPSCTILALS 448 (520)
T ss_dssp HHHHHHHHHSCSCCCHHHHHHHHHHHHHHHT--TCSEEEEECSSSHHH----HHHHHTCCSSEEEEEE
T ss_pred hhHhhhhhccCCCCCHHHHHHHHHHHHHHhc--CCCEEEEECCCcHHH----HHHHhcCCCCCEEEEc
Confidence 0 00011121223344456777777 468999999999994 4455578999999986
No 491
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=46.48 E-value=25 Score=28.52 Aligned_cols=32 Identities=16% Similarity=0.233 Sum_probs=27.9
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
..|+.-.+|-.|.++|+..++.|++++++=..
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESG 49 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 45888899999999999999999999888543
No 492
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=46.40 E-value=62 Score=26.46 Aligned_cols=83 Identities=17% Similarity=0.107 Sum_probs=44.0
Q ss_pred EEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCC--CHHHHHHHHHHHHHhCCCeEEcC
Q 028372 71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSAL--RFEEILEKGEEILKKTPDGYLLR 148 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~--~~~~~~~~a~~~~~~~~~~~~~~ 148 (210)
.++..++|..+..++..+- .+-.-.|+++...-..-...++..|++++.++.+. ++.-..+..++..+.....+++.
T Consensus 101 ~v~~t~g~~~a~~~~~~~~-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~ 179 (412)
T 2x5d_A 101 EAIVTIGSKEGLAHLMLAT-LDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILG 179 (412)
T ss_dssp SEEEESCHHHHHHHHHHHH-CCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEE
T ss_pred CEEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEEC
Confidence 3666777777776666543 22222444444444555666778899999887542 33211222222222334566664
Q ss_pred CCCCCh
Q 028372 149 QFENPA 154 (210)
Q Consensus 149 ~~~n~~ 154 (210)
...||.
T Consensus 180 ~p~npt 185 (412)
T 2x5d_A 180 FPSNPT 185 (412)
T ss_dssp SSCTTT
T ss_pred CCCCCC
Confidence 334553
No 493
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=46.34 E-value=1.2e+02 Score=24.78 Aligned_cols=106 Identities=21% Similarity=0.150 Sum_probs=63.0
Q ss_pred eEEEeeCCCchHHHHHHHHH-HcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcC
Q 028372 70 TTLIEVTSGNTGVGLAFIAA-ARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLR 148 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~-~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~ 148 (210)
+++..-..|+.|.++|..++ .+|++++++-+....... ...+|.+. +. +.++ +.++. +.+.+.
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~---~~~~g~~~--~~---~l~e-------ll~~a-DvVil~ 227 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAET---EKALGAER--VD---SLEE-------LARRS-DCVSVS 227 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHH---HHHHTCEE--CS---SHHH-------HHHHC-SEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhh---HhhcCcEE--eC---CHHH-------HhccC-CEEEEe
Confidence 45667788999999999999 999987766544333322 23456553 21 2332 22333 445443
Q ss_pred CCCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhH--HHHHHHHHHh
Q 028372 149 QFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGT--VTGAGRFLKE 197 (210)
Q Consensus 149 ~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~--~~Gi~~~~k~ 197 (210)
--.++.. ...+..+++..+ +++.+++-+++|+. ...+..++++
T Consensus 228 vp~~~~t----~~li~~~~l~~m--k~gailin~srg~~vd~~aL~~aL~~ 272 (348)
T 2w2k_A 228 VPYMKLT----HHLIDEAFFAAM--KPGSRIVNTARGPVISQDALIAALKS 272 (348)
T ss_dssp CCCSGGG----TTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred CCCChHH----HHHhhHHHHhcC--CCCCEEEECCCCchhCHHHHHHHHHh
Confidence 3222221 112224666666 46889999999954 4567777765
No 494
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=46.19 E-value=55 Score=25.97 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=28.8
Q ss_pred CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC
Q 028372 69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC 103 (210)
Q Consensus 69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~ 103 (210)
++.+|+..+|--|.+++......|.++++++....
T Consensus 6 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 40 (337)
T 2c29_D 6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPT 40 (337)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcc
Confidence 46788888999999999988888999888776543
No 495
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=46.19 E-value=17 Score=30.60 Aligned_cols=32 Identities=13% Similarity=0.237 Sum_probs=28.4
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS 101 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~ 101 (210)
+.|+...+|-.|.++|+..++.|++++++-..
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCC
Confidence 45888999999999999999999999999654
No 496
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=46.16 E-value=1.1e+02 Score=24.32 Aligned_cols=53 Identities=4% Similarity=-0.094 Sum_probs=36.1
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~ 123 (210)
..++..++|..+..++..+- .+-.-.|+++...-..-...++..|++++.++.
T Consensus 83 ~~v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~ 135 (383)
T 3kax_A 83 EWIVFSAGIVPALSTSIQAF-TKENESVLVQPPIYPPFFEMVTTNNRQLCVSPL 135 (383)
T ss_dssp GGEEEESCHHHHHHHHHHHH-CCTTCEEEECSSCCHHHHHHHHHTTCEEEECCC
T ss_pred hhEEEcCCHHHHHHHHHHHh-CCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccc
Confidence 34676777777776666554 222235666666666667778899999999874
No 497
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=46.05 E-value=39 Score=27.63 Aligned_cols=84 Identities=13% Similarity=-0.010 Sum_probs=43.1
Q ss_pred EEEeeCCCchHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHH---HHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCe
Q 028372 71 TLIEVTSGNTGVGLAFIAAAR---GYNLIIVMPSTCSMERRIVL---RALGAEIILADSALRFEEILEKGEEILKKTPDG 144 (210)
Q Consensus 71 ~vv~~ssGN~g~alA~~a~~~---g~~~~vvvp~~~~~~~~~~~---~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~ 144 (210)
.++..++|..+..+|..+-.. +-.-.|+++...-......+ +..|++++.++.+.+..-..+..++..++....
T Consensus 87 ~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~ 166 (423)
T 3lvm_A 87 EIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTIL 166 (423)
T ss_dssp GEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEE
T ss_pred eEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCCcEE
Confidence 466677777777766654431 21234455554444443333 666999999985422110011222222233356
Q ss_pred EEcCCCCCCh
Q 028372 145 YLLRQFENPA 154 (210)
Q Consensus 145 ~~~~~~~n~~ 154 (210)
+++....||.
T Consensus 167 v~~~~~~npt 176 (423)
T 3lvm_A 167 VSIMHVNNEI 176 (423)
T ss_dssp EECCSBCTTT
T ss_pred EEEeCCCCCC
Confidence 6666555554
No 498
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=45.88 E-value=94 Score=23.39 Aligned_cols=42 Identities=10% Similarity=0.150 Sum_probs=31.9
Q ss_pred HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC--CCCEEEEE
Q 028372 163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN--PDIKVVLR 207 (210)
Q Consensus 163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~--~~~~vigv 207 (210)
...+++++- ++||+||+. +..++.|+..++++.+ .++.|+|+
T Consensus 177 ~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~p~di~vig~ 220 (276)
T 3ksm_A 177 EMLRLLKET-PTIDGLFTP--NESTTIGALVAIRQSGMSKQFGFIGF 220 (276)
T ss_dssp HHHHHHHHC-SCCCEEECC--SHHHHHHHHHHHHHTTCTTSSEEEEE
T ss_pred HHHHHHHhC-CCceEEEEC--CchhhhHHHHHHHHcCCCCCeEEEEe
Confidence 445666554 578999876 6678889999999876 37889886
No 499
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=45.88 E-value=27 Score=26.93 Aligned_cols=31 Identities=16% Similarity=0.227 Sum_probs=27.4
Q ss_pred eEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
..|+.-.+|-.|.++|...++.|++++++=+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 3578889999999999999999999999864
No 500
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=45.86 E-value=35 Score=26.86 Aligned_cols=29 Identities=14% Similarity=0.064 Sum_probs=24.1
Q ss_pred EEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372 72 LIEVTSGNTGVGLAFIAAARGYNLIIVMP 100 (210)
Q Consensus 72 vv~~ssGN~g~alA~~a~~~g~~~~vvvp 100 (210)
|..-..|+.|.++|......|.+++++-+
T Consensus 4 I~iiG~G~mG~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 4 YGFLGLGIMGGPMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp EEEECCSTTHHHHHHHHHHHTCCEEEECS
T ss_pred EEEEccCHHHHHHHHHHHHCCCeEEEEcC
Confidence 44457899999999998899999888744
Done!