BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028377
(210 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12
PE=1 SV=1
Length = 239
Score = 299 bits (766), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 174/203 (85%), Gaps = 2/203 (0%)
Query: 3 TGELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPR 62
+ ELL+I+P++L+FPFELKKQISCSL L NKTDNYVAFKVKTTNPKKYCVRPNTG+V PR
Sbjct: 2 SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61
Query: 63 STCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECKLR 122
S+ +++VTMQAQKEAP D+QCKDKFLLQ V + G T KD+ EMF+KEAGH VEE KLR
Sbjct: 62 SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121
Query: 123 VIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQDKSTEARA 182
V+YV+PP+PPSPV EGSEEGSSPR SVSDNG N+++F AA R +R++ QD S+EARA
Sbjct: 122 VVYVAPPRPPSPVREGSEEGSSPRASVSDNG--NASDFTAAPRFSADRVDAQDNSSEARA 179
Query: 183 LISKLKDEKNNAVQQNNKLRQDL 205
L++KL +EKN+AVQ NN+L+Q+L
Sbjct: 180 LVTKLTEEKNSAVQLNNRLQQEL 202
>sp|Q8VZ95|VAP11_ARATH Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11
PE=1 SV=1
Length = 256
Score = 297 bits (761), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 142/205 (69%), Positives = 171/205 (83%), Gaps = 2/205 (0%)
Query: 1 MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVL 60
MS ELL++EPL+L+FPFELKKQISCSL L+NKTDN VAFKVKTTNPKKYCVRPNTG+VL
Sbjct: 17 MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76
Query: 61 PRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECK 120
PRSTC+++VTMQAQKEAP DMQCKDKFLLQ V + G TAK++ EMF+KEAGH VEE K
Sbjct: 77 PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136
Query: 121 LRVIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQDKSTEA 180
LRV YV+PP+PPSPV EGSEEGSSPR SVSDNGH +EF+ + HQ+ ++EA
Sbjct: 137 LRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGH--GSEFSFERFIVDNKAGHQENTSEA 194
Query: 181 RALISKLKDEKNNAVQQNNKLRQDL 205
RALI+KL +EK +A+Q NN+L+++L
Sbjct: 195 RALITKLTEEKQSAIQLNNRLQREL 219
>sp|Q84WW5|VAP13_ARATH Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13
PE=2 SV=1
Length = 239
Score = 260 bits (664), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 129/206 (62%), Positives = 164/206 (79%), Gaps = 5/206 (2%)
Query: 1 MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDNY-VAFKVKTTNPKKYCVRPNTGIV 59
M+TG+L++I P ELKFPFELKKQ SCS+QL+NKT VAFKVKTTNP+KYCVRPNTG+V
Sbjct: 1 MTTGDLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVV 60
Query: 60 LPRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEEC 119
LP +C++ VTMQAQKEAP DMQCKDKFL+Q+V +DGTT+K++ AEMFNKEAG V+E+
Sbjct: 61 LPGDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDF 120
Query: 120 KLRVIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQDKSTE 179
KLRV+Y+ P PPSPVPEGSEEG+SP S++D +++ F +R F E E KS+E
Sbjct: 121 KLRVVYI-PANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSE---KSSE 176
Query: 180 ARALISKLKDEKNNAVQQNNKLRQDL 205
A ++ISKL +EK +A QQ+ KLR +L
Sbjct: 177 AWSMISKLTEEKTSATQQSQKLRLEL 202
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 221 bits (562), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 101/154 (65%), Positives = 126/154 (81%)
Query: 5 ELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRST 64
ELL I+P++++FP EL K++SCSL L+NKT+NYVAFK KTTN KKY VRPN G+VLPRS+
Sbjct: 175 ELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPRSS 234
Query: 65 CDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECKLRVI 124
C+++V MQA KEAP DMQC+DK L Q TTAKD+ +EMF+KEAGH EE +L+V+
Sbjct: 235 CEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLKVM 294
Query: 125 YVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSA 158
YV+PPQPPSPV EG+EEGSSPR SVSDNG+ + A
Sbjct: 295 YVTPPQPPSPVQEGTEEGSSPRASVSDNGNASEA 328
Score = 205 bits (521), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/176 (55%), Positives = 125/176 (71%), Gaps = 1/176 (0%)
Query: 1 MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVL 60
MST ELL+ + ++++FP EL KQ SCSL L+NKTDNYVAFK +TT PK YCV+P+ G+VL
Sbjct: 1 MSTDELLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVL 60
Query: 61 PRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECK 120
PRS+C+++V MQA KEAP D QCKDK L Q GT K++ +EMF+KEAGH VEE
Sbjct: 61 PRSSCEVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETI 120
Query: 121 LRVIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQDK 176
++IYV+PPQP SPV EG E+GSSP SVSD G+ S F + + I D+
Sbjct: 121 FKIIYVAPPQPQSPVQEGLEDGSSPSASVSDKGNA-SEVFVGPSVGIVDLIRMSDE 175
>sp|O82213|VAP31_ARATH Vesicle-associated protein 3-1 OS=Arabidopsis thaliana GN=PVA31
PE=3 SV=1
Length = 149
Score = 184 bits (467), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 103/126 (81%)
Query: 1 MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVL 60
MS ELL IEP+ L+FPFELKKQ+SCSL L+NKTDN VAFKVKTTN YCVRPN G++L
Sbjct: 1 MSNNELLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLIL 60
Query: 61 PRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECK 120
P+STC ++VTMQAQKE P DMQ +KF++QSV + G TAK++ EMF+KE+GHVVEE K
Sbjct: 61 PKSTCKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETK 120
Query: 121 LRVIYV 126
LRV YV
Sbjct: 121 LRVTYV 126
>sp|Q9LVU1|VAP21_ARATH Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21
PE=2 SV=1
Length = 220
Score = 164 bits (414), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 126/201 (62%), Gaps = 31/201 (15%)
Query: 5 ELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRST 64
+L+SI+P ELKF FEL+KQ C L+++NKT+NYVAFKVKTT+PKKY VRPNTG++ P +
Sbjct: 8 QLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWDS 67
Query: 65 CDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECKLRVI 124
C I VT+QAQ+E PPDMQCKDKFLLQS T ++ + F K++G + ECKL+V
Sbjct: 68 CIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECKLKVS 127
Query: 125 YVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQDKSTEARALI 184
Y++P + + SS G+ + +G +S+E + I
Sbjct: 128 YITP---------STTQRSSESGATNGDG----------------------QSSETISTI 156
Query: 185 SKLKDEKNNAVQQNNKLRQDL 205
+LK+E++ AV+Q +L+ +L
Sbjct: 157 QRLKEERDAAVKQTQQLQHEL 177
>sp|B9DHD7|VAP22_ARATH Vesicle-associated protein 2-2 OS=Arabidopsis thaliana GN=PVA22
PE=1 SV=1
Length = 386
Score = 160 bits (406), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/148 (55%), Positives = 102/148 (68%), Gaps = 4/148 (2%)
Query: 6 LLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTC 65
LL I+P L+F +LKKQ SC +QL+N T +YVAFKVKTT+PKKYCVRPN G+V P+STC
Sbjct: 5 LLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTC 64
Query: 66 DIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECKLRVIY 125
+ V MQA KE PPDM CKDKFL+QS + TT +DI A MF+K G +EE KLRV
Sbjct: 65 EFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTL 124
Query: 126 VSPPQPPSPVPEGSEEGSSPRGSVSDNG 153
V PPS PE S + +G+V ++
Sbjct: 125 V----PPSDSPELSPINTPKQGAVFEDS 148
>sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associated protein C16G5.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16G5.05c PE=1 SV=1
Length = 383
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 3 TGELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPR 62
+GEL P + K++ + + N V FKVKTT PK YCVRPN+G + P+
Sbjct: 6 SGELFFYPPFTT-----MSKEL---ISVHNPNPEPVIFKVKTTAPKHYCVRPNSGKIEPK 57
Query: 63 STCDIIVTMQAQKEAP-PDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEA---GHVVEE 118
ST ++ V +QA KE P PD +C+DKFL+QS+ D T+ N F E G + +
Sbjct: 58 STVNVQVLLQAMKEEPAPDFKCRDKFLIQSMAIGDADTSNVENYHEFWTEMEKQGRSIFD 117
Query: 119 CKLRVIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQDKST 178
K+R +Y S QPP + E S+ VS G N A A ++
Sbjct: 118 RKIRCVY-STKQPPQSADKQVENTSTSNPPVSVEGSENLASSVGGPTAVGVSLD------ 170
Query: 179 EARALISKLKDEKNNAV 195
EA+ + KD +N V
Sbjct: 171 EAQNDFNGAKDHLSNGV 187
>sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC17C9.12 PE=1 SV=2
Length = 319
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 14 LKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQA 73
+ FP L + + C L+L N + FKVKTT PK+YCVRPN G + S + V +Q
Sbjct: 9 IVFPRPLTRLVKCDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAVSVEVILQP 68
Query: 74 QKEAP-PDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECKLRVIY 125
P P +C+DKFL+QS + DI A+++ + + + E K+R +Y
Sbjct: 69 LDHEPAPGTKCRDKFLVQSTELKPELQGMDI-ADIWTQVSKANISERKIRCVY 120
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding protein
OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 112/228 (49%), Gaps = 38/228 (16%)
Query: 7 LSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTC 65
L +EP EL+F ++ L+LSN TD + FKVKTT PK+YCVRPN+GI+ P+++
Sbjct: 8 LILEPAGELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILEPKTSI 67
Query: 66 DIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEA-GHVVEECKLRVI 124
+ V +Q P+ + K KF++QS+ D + E+ K+A + + KLR +
Sbjct: 68 AVAVMLQPFNYD-PNEKNKHKFMVQSMYAPDHVVE---SQELLWKDAPPESLMDTKLRCV 123
Query: 125 YVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFA----------------------A 162
+ +P+GS + + S + + + +E A
Sbjct: 124 F--------EMPDGSHQAPASDASRATDAGAHFSESALEDPTVASRKTETQSPKRVGAVG 175
Query: 163 AARAFTERIEHQDKSTEARALISKLKDEKNNAVQQNNKLRQDLVSDYI 210
+A ++++H+ K +A++ I+ LK E + + +LR+ ++D +
Sbjct: 176 SAGEDVKKLQHELK--KAQSEITSLKGENSQLKDEGIRLRKVAMTDTV 221
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A OS=Pongo
abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 6/119 (5%)
Query: 11 PLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVT 70
P +LKF ++ +L+L N +D V FKVKTT P++YCVRPN+GI+ P ST + V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 71 MQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLRVIYVSP 128
+Q + P+ + K KF++Q++ T+ + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNTS----DMEAVWKEAKPDELMDSKLRCVFEMP 133
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A OS=Homo
sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 6/119 (5%)
Query: 11 PLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVT 70
P +LKF ++ +L+L N +D V FKVKTT P++YCVRPN+GI+ P ST + V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 71 MQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLRVIYVSP 128
+Q + P+ + K KF++Q++ T+ + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNTS----DMEAVWKEAKPDELMDSKLRCVFEMP 133
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B OS=Bos
taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 7/132 (5%)
Query: 5 ELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRS 63
++LS+EP ELKF ++ +L+L N TD V FKVKTT P++YCVRPN+GI+ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 64 TCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLR 122
+ ++ V +Q + P+ + K KF++QS+ T+ + E KEA + + KLR
Sbjct: 66 SINVSVMLQPF-DYDPNEKSKHKFMVQSMFAPTDTS----DMEAVWKEAKPEDLMDSKLR 120
Query: 123 VIYVSPPQPPSP 134
++ P + P
Sbjct: 121 CVFELPAENDKP 132
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C OS=Homo
sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 7/132 (5%)
Query: 5 ELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRS 63
++LS+EP ELKF ++ +L+L N TD V FKVKTT P++YCVRPN+GI+ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 64 TCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLR 122
+ ++ V +Q + P+ + K KF++QS+ T+ + E KEA + + KLR
Sbjct: 66 SINVSVMLQPF-DYDPNEKSKHKFMVQSMFAPTDTS----DMEAVWKEAKPEDLMDSKLR 120
Query: 123 VIYVSPPQPPSP 134
++ P + P
Sbjct: 121 CVFELPAENDKP 132
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B OS=Rattus
norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 76/132 (57%), Gaps = 7/132 (5%)
Query: 5 ELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRS 63
++LS+EP ELKF ++ +L+L N TD V FKVKTT P++YCVRPN+G++ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGA 65
Query: 64 TCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLR 122
+ ++ V +Q + P+ + K KF++QS+ T+ + E KEA + + KLR
Sbjct: 66 SLNVSVMLQPF-DYDPNEKSKHKFMVQSMFAPPDTS----DMEAVWKEAKPEDLMDSKLR 120
Query: 123 VIYVSPPQPPSP 134
++ P + P
Sbjct: 121 CVFELPAENAKP 132
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B OS=Sus
scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 7/132 (5%)
Query: 5 ELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRS 63
++LS+EP ELKF ++ +L+L N TD V FKVKTT P++YCVRPN+GI+ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 64 TCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLR 122
+ ++ V +Q + P+ + K KF++QS+ T+ + E KEA + + KLR
Sbjct: 66 SINVSVMLQPF-DYDPNEKSKHKFMVQSMFAPADTS----DMEAAWKEAKPEDLMDSKLR 120
Query: 123 VIYVSPPQPPSP 134
++ P + P
Sbjct: 121 CVFELPAENDKP 132
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B OS=Mus
musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 76/132 (57%), Gaps = 7/132 (5%)
Query: 5 ELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRS 63
++LS+EP ELKF ++ +L+L N TD V FKVKTT P++YCVRPN+G++ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGA 65
Query: 64 TCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLR 122
+ ++ V +Q + P+ + K KF++QS+ T+ + E KEA + + KLR
Sbjct: 66 SLNVSVMLQPF-DYDPNEKSKHKFMVQSMFAPPDTS----DMEAVWKEAKPEDLMDSKLR 120
Query: 123 VIYVSPPQPPSP 134
++ P + P
Sbjct: 121 CVFELPAENAKP 132
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A OS=Mus
musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 11 PLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVT 70
P +LKF ++ +L+L N +D V FKVKTT P++YCVRPN+GI+ P S + V
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVM 79
Query: 71 MQAQKEAPPDMQCKDKFLLQSV 92
+Q + P+ + K KF++Q++
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTI 100
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A OS=Bos
taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 11 PLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVT 70
P +LKF ++ +L+L N +D V FKVKTT P++YCVRPN+GI+ P T + V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTVTVSVM 79
Query: 71 MQAQKEAPPDMQCKDKFLLQSV 92
+Q + P+ + K KF++Q++
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTI 100
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A OS=Rattus
norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 11 PLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVT 70
P +LKF ++ +L+L N +D V FKVKTT P++YCVRPN+G++ P S + V
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIVTVSVM 79
Query: 71 MQAQKEAPPDMQCKDKFLLQSV 92
+Q + P+ + K KF++Q++
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTI 100
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein SCS2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS2 PE=1 SV=3
Length = 244
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 7 LSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCD 66
+ I P L + L +Q + +SN +D +AFKVKTT PK YCVRPN +V P T
Sbjct: 4 VEISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQ 63
Query: 67 IIVTMQAQKEAP-PDMQCKDKFLLQSVKTN---DGTTAKDINAEM 107
+ V E P D +C+DKFL+ ++ + +G D+ +++
Sbjct: 64 VQVIFLGLTEEPAADFKCRDKFLVITLPSPYDLNGKAVADVWSDL 108
>sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2 OS=Arabidopsis thaliana GN=PVA42
PE=1 SV=1
Length = 295
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 12/135 (8%)
Query: 1 MSTGELLSIEPLE-LKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIV 59
+ T L ++P E L FP+E KQ+ ++++ N + ++VAFK +TT PK +RP I+
Sbjct: 102 LPTKRRLKLDPSEKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAIL 161
Query: 60 LPRSTCDIIVTM------QAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG 113
P T II T+ E P D + + KF + S+K D E+F+++
Sbjct: 162 APGET--IIATVFKFVEPPENNEKPMDQRSRVKFKIMSLKVKG---PMDYVPELFDEQKD 216
Query: 114 HVVEECKLRVIYVSP 128
V +E LRVI++ P
Sbjct: 217 DVSKEQILRVIFLDP 231
>sp|Q8LPQ7|VAP43_ARATH Vesicle-associated protein 4-3 OS=Arabidopsis thaliana GN=PVA43
PE=2 SV=1
Length = 287
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 1 MSTGELLSIEP-LELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIV 59
+ T L ++P +L FP+E KQ+ ++++ N + ++VAFK +TT PK +RP I+
Sbjct: 94 LPTKRRLKLDPSAKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAIL 153
Query: 60 LPR----STCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHV 115
P +T V E P + + KF + S+K T D E+F ++ HV
Sbjct: 154 APGEEIIATVFKFVEPPENNEKPMEQKSGVKFKIMSLKMKVPT---DYMPELFEEQKDHV 210
Query: 116 VEECKLRVIYVSPPQPPS 133
EE +RV+++ P P S
Sbjct: 211 SEEQVMRVVFLDPENPNS 228
>sp|Q1ECE0|VAP41_ARATH Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41
PE=2 SV=1
Length = 266
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 14 LKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTM-- 71
L FP+E KQ+ +++L N + ++ AFK +TT PK +RP G++ P + V
Sbjct: 85 LYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCYMRPPGGVLAPGESVFATVFKFV 144
Query: 72 ---QAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECKLRVIYVSP 128
+ ++ P + + K KF + S+K G + E+F+++ V E LRVI++
Sbjct: 145 EHPENNEKQPLNQKSKVKFKIMSLKVKPGV---EYVPELFDEQKDQVAVEQVLRVIFIDA 201
Query: 129 PQP 131
+P
Sbjct: 202 DRP 204
>sp|Q6Q595|SCS22_YEAST Vesicle-associated membrane protein-associated protein SCS22
OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SCS22 PE=1 SV=2
Length = 175
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 7 LSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCD 66
+ I P +L F L KQ + ++L N + V FKV+T+ P KYCVRPN I+ + +
Sbjct: 1 MRIVPEKLVFKAPLNKQSTEYIKLENDGEKRVIFKVRTSAPTKYCVRPNVAIIGAHESVN 60
Query: 67 I-IVTMQAQKEAPPDM--QCKDKFLLQSV 92
+ IV + K D Q +DKFL+ ++
Sbjct: 61 VQIVFLGLPKSTADDEMDQKRDKFLIVTL 89
>sp|Q9CWP6|MSPD2_MOUSE Motile sperm domain-containing protein 2 OS=Mus musculus GN=Mospd2
PE=1 SV=2
Length = 518
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 4 GELLSIEPLE-LKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPR 62
G LL I P E L F + + L+N T N VAFKV+TT P+KY V+P+ P
Sbjct: 325 GPLLHISPAEELYFGSIESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPG 384
Query: 63 STCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEA-GHVVEECKL 121
++ DIIV+ + +D+FL+ + + + F KE + V E +L
Sbjct: 385 ASIDIIVS----PHGGLTVSAQDRFLIMAAEMEQSSGTGPAELSQFWKEVPRNKVMEHRL 440
Query: 122 RVIYVSPPQPPS 133
R V +P S
Sbjct: 441 RCHTVESSKPNS 452
>sp|Q8NHP6|MSPD2_HUMAN Motile sperm domain-containing protein 2 OS=Homo sapiens GN=MOSPD2
PE=1 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 4 GELLSIEPLE-LKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPR 62
G LL I P E L F + + L+N T N VAFKV+TT P+KY V+P+ P
Sbjct: 325 GPLLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPG 384
Query: 63 STCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEA-GHVVEECKL 121
++ DI+V+ + +D+FL+ + + + F KE + V E +L
Sbjct: 385 ASVDIVVS----PHGGLTVSAQDRFLIMAAEMEQSSGTGPAELTQFWKEVPRNKVMEHRL 440
Query: 122 RVIYVSPPQP 131
R V +P
Sbjct: 441 RCHTVESSKP 450
>sp|P34538|YNC5_CAEEL Uncharacterized protein R05D3.5 OS=Caenorhabditis elegans
GN=R05D3.5 PE=2 SV=3
Length = 178
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 7 LSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCD 66
L ++ +E K E +K IS +L+L N T V++KV+ T+ + V+P G V P T
Sbjct: 65 LQVQKVEFKCT-EDRKPISVNLKLHNPTAVTVSYKVRCTSADIFRVQPPLGFVKPSETVS 123
Query: 67 IIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINA 105
I++ Q Q + D K+ + +DG TA+++ A
Sbjct: 124 IVIWYQNQDKK--DAISKNHYFAFYHTNSDGRTARELWA 160
>sp|P34593|YOD1_CAEEL Uncharacterized protein ZC262.1 OS=Caenorhabditis elegans
GN=ZC262.1 PE=4 SV=1
Length = 131
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 6 LLSIEPLELKFP-FELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRST 64
LL LE++F E +K IS +L+L N T V++KV+ T+ + V+P G V P T
Sbjct: 15 LLIYSSLEVEFKCTEDRKPISVNLKLHNPTAVTVSYKVRCTSADIFRVQPPLGFVKPSET 74
Query: 65 CDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINA 105
I++ Q Q + D K+ + +DG TA+++ A
Sbjct: 75 VSIVIWYQNQDKK--DAISKNHYFAFYHTNSDGRTARELWA 113
>sp|Q8BGG6|MSPD3_MOUSE Motile sperm domain-containing protein 3 OS=Mus musculus GN=Mospd3
PE=2 SV=1
Length = 235
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 28 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQAQKEAPPDMQCKDKF 87
L L N T + F+V T P KY V G V P+S DI++ A P +D+F
Sbjct: 55 LTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVIRHVA--PVPSHYDVQDRF 112
Query: 88 LLQSVKTNDGTTAKDIN 104
++ + +GT + +
Sbjct: 113 RIE--LSEEGTEGRVVG 127
>sp|Q3T033|MSPD3_BOVIN Motile sperm domain-containing protein 3 OS=Bos taurus GN=MOSPD3
PE=2 SV=1
Length = 235
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 28 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQAQKEAPPDMQCKDKF 87
L L N T + F+V T P KY V G V P+S DI++ A P + +D+F
Sbjct: 55 LTLYNPTGAVLRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVIRHVAPH--PRNYDVQDRF 112
Query: 88 LLQSVKTNDGTTAKDIN 104
++ + +GT + +
Sbjct: 113 RIE--LSEEGTEGRVVG 127
>sp|O75425|MSPD3_HUMAN Motile sperm domain-containing protein 3 OS=Homo sapiens GN=MOSPD3
PE=2 SV=1
Length = 235
Score = 35.0 bits (79), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 28 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQAQKEAPPDMQCKDKF 87
L L N T + F+V T P KY V G V P+S DI++ A P +D+F
Sbjct: 55 LTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVIRHVA--PIPSHYDVQDRF 112
>sp|O45433|SSP32_CAEEL Sperm-specific class P protein 32 OS=Caenorhabditis elegans
GN=ssp-32 PE=2 SV=1
Length = 107
Score = 34.3 bits (77), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 6 LLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRS 63
+L+IEP FP S + +++ ++ +AFKVK++N + Y VRP G V R
Sbjct: 1 MLTIEPPSATFP---ASGGSSTHTITSVNESRMAFKVKSSNNEHYRVRPVYGFVEARG 55
>sp|Q9QZY7|CD1C2_CAVPO T-cell surface glycoprotein CD1c2 OS=Cavia porcellus GN=CD1C2 PE=2
SV=1
Length = 332
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 13/129 (10%)
Query: 12 LELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTN----PKKYCVRPNTGIVLPRSTCDI 67
L+ K+PF+++ ++ C L T +++ N K CV G + CDI
Sbjct: 106 LQFKYPFDIQVRLGCELHSRETTKSFLHVAFNGLNFLSFQHKSCVPSPEGETRAQKACDI 165
Query: 68 IVTMQAQKEAPPDMQ---CKDKFLLQSVKTNDGTTAKDINAEMF-----NKEAGHVVEEC 119
+ T +A KE + C + LL ++ + + E++ N E G ++ C
Sbjct: 166 LNTYEATKEIAYYVMNDICP-RLLLSLLEAGKMDLQRQVRPEVWLSSSPNLEPGRLLLAC 224
Query: 120 KLRVIYVSP 128
+ Y P
Sbjct: 225 HVSGFYPKP 233
>sp|Q9QZY8|CD1C1_CAVPO T-cell surface glycoprotein CD1c1 OS=Cavia porcellus GN=CD1C1 PE=2
SV=1
Length = 332
Score = 33.9 bits (76), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 13/129 (10%)
Query: 12 LELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKY----CVRPNTGIVLPRSTCDI 67
LE+K+PFE++ + C L T ++ V N Y V G + CD+
Sbjct: 106 LEVKYPFEVQARAGCELHSGEHTKGFIHAAVNGLNFLSYQNKSLVPSPEGGTRAQKFCDL 165
Query: 68 IVTMQAQKEAPPDMQCKD---KFLLQSVKTNDGTTAKDINAEMF-----NKEAGHVVEEC 119
T + +E + +D +FLL + + + E++ N E G ++ C
Sbjct: 166 FNTYEGIRETVYYL-IRDTCPRFLLGLLDAGKMDLQRQVRPEVWLSSSPNLEPGRLLLAC 224
Query: 120 KLRVIYVSP 128
+ Y P
Sbjct: 225 HVSGFYPKP 233
>sp|O01829|SSP19_CAEEL Sperm-specific class P protein 19 OS=Caenorhabditis elegans
GN=ssp-19 PE=1 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 28/50 (56%)
Query: 24 ISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQA 73
+S + +L N + FK+K++N +Y + P G V P + D+++T A
Sbjct: 17 VSSTHKLVNGGAEKIVFKIKSSNNNEYRIAPVFGFVDPSGSKDVVITRTA 66
>sp|O50399|DNAE2_MYCTU Error-prone DNA polymerase OS=Mycobacterium tuberculosis GN=dnaE2
PE=2 SV=4
Length = 1098
Score = 32.3 bits (72), Expect = 2.5, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 112 AGHVVEECKLRVIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERI 171
A + E C + ++P PP VP+G E S R V +A RA+++ I
Sbjct: 325 AAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRAYSQ-I 383
Query: 172 EHQDK 176
EH+ K
Sbjct: 384 EHELK 388
>sp|Q7TWL9|DNAE2_MYCBO Error-prone DNA polymerase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=dnaE2 PE=3 SV=2
Length = 1091
Score = 32.3 bits (72), Expect = 2.6, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 112 AGHVVEECKLRVIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERI 171
A + E C + ++P PP VP+G E S R V +A RA+++ I
Sbjct: 318 AAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRAYSQ-I 376
Query: 172 EHQDK 176
EH+ K
Sbjct: 377 EHELK 381
>sp|P53022|MSP2_GLORO Major sperm protein 2 OS=Globodera rostochiensis GN=MSP-2 PE=2
SV=2
Length = 126
Score = 32.0 bits (71), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/73 (19%), Positives = 37/73 (50%)
Query: 1 MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVL 60
+ G++ ++ ++ F + + +++ N N + F KTT PK+ + P G++
Sbjct: 4 LPPGDIATMPNQKVVFNAPFDNKATYYVRVINPGTNRIGFAFKTTKPKRINMNPPNGVLG 63
Query: 61 PRSTCDIIVTMQA 73
P+ + ++ ++ A
Sbjct: 64 PKESVNVAISCDA 76
>sp|Q6FJI3|HSP7F_CANGA Heat shock protein homolog SSE1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SSE1 PE=3 SV=1
Length = 694
Score = 31.2 bits (69), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 22/207 (10%)
Query: 16 FPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQA-- 73
F FE Q S S + + ++ +V N P+T ++ + D +M+A
Sbjct: 392 FKFEDIHQFSVSYKWDKQVEDEDHLEVFPANSN----FPSTKLITLHRSGDF--SMEANY 445
Query: 74 --QKEAPPDMQCK-DKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEEC-KLRVIYVSP 128
++E PP + K+ + V+ +G T+ + ++ +G H++EE L I V
Sbjct: 446 TNKEELPPHLDANIAKWDITGVQIPEGETSVPVKLKLRCDPSGLHIIEEAYSLEDIVV-- 503
Query: 129 PQPPSPVPEGSEEGSSP------RGSVSDNGHVNSAEFAAAARAFTERIEHQDKSTEARA 182
+ P+PE + E + P + D + + F A IE ++ T
Sbjct: 504 -KEEVPLPEDAPEDAVPEVKEVTKTVKKDTLEITAHTFTLADDKLNTLIEKENDMTAQDR 562
Query: 183 LISKLKDEKNNAVQQNNKLRQDLVSDY 209
L+++ +D KNN + LR L +Y
Sbjct: 563 LVAETEDRKNNLEEYIYTLRGKLDEEY 589
>sp|Q8CFA7|KLF17_MOUSE Krueppel-like factor 17 OS=Mus musculus GN=Klf17 PE=1 SV=2
Length = 341
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 130 QPPSPVPEGSEEGSSPRGSVSDNGHVNS---AEFAAAARAFTER---IEHQDKST 178
+PP+P PEG+E S+ RG+ V+ + + +++T+R + HQ K T
Sbjct: 227 EPPTPAPEGAESPSTSRGATRRQSPVSRPYVCTYNSCGKSYTKRSHLVSHQRKHT 281
>sp|Q21289|SSP10_CAEEL Sperm-specific class P protein 10 OS=Caenorhabditis elegans
GN=ssp-10 PE=2 SV=1
Length = 109
Score = 30.8 bits (68), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 25 SCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQA 73
S + +L N + FK+K++N +Y + P G V P + D+++T A
Sbjct: 18 SSTHKLVNGGAEKIIFKIKSSNNNEYRIAPVFGFVDPSGSKDVVITRTA 66
>sp|Q23246|SSPZC_CAEEL Sperm-specific protein ZC168.6 OS=Caenorhabditis elegans
GN=ZC168.6 PE=1 SV=1
Length = 107
Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 30 LSNKTDNYVAFKVKTTNPKKYCVRPNTGIV 59
+++++D+ +AFKVK++N + Y VRP G V
Sbjct: 22 ITSESDSRLAFKVKSSNNEHYRVRPVYGFV 51
>sp|Q23058|SSP9_CAEEL Sperm-specific class P protein 9/11 OS=Caenorhabditis elegans
GN=ssp-9 PE=2 SV=1
Length = 109
Score = 30.8 bits (68), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 25 SCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQA 73
S + +L N + FK+K++N +Y + P G V P + D+++T A
Sbjct: 18 SSTHKLVNGGAEKIIFKIKSSNNNEYRIAPVFGFVDPAGSKDVVITRTA 66
>sp|Q9UJG1|MSPD1_HUMAN Motile sperm domain-containing protein 1 OS=Homo sapiens
GN=MOSPD1 PE=2 SV=1
Length = 213
Score = 30.8 bits (68), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 28 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQAQKEAPPDMQCKDKF 87
L L N + + FKV T P KY V G V P+ DI++ + + DKF
Sbjct: 38 LTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKPQCCVDIVIRHRDVRSC--HYGVIDKF 95
Query: 88 LLQ 90
LQ
Sbjct: 96 RLQ 98
>sp|Q8VEL0|MSPD1_MOUSE Motile sperm domain-containing protein 1 OS=Mus musculus
GN=Mospd1 PE=2 SV=1
Length = 213
Score = 30.8 bits (68), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 28 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIV 69
L L N + + FKV T P KY V G V P+ DI++
Sbjct: 38 LTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKPQCCVDIVI 79
>sp|B2B223|ARO1_PODAN Pentafunctional AROM polypeptide OS=Podospora anserina (strain S /
ATCC MYA-4624 / DSM 980 / FGSC 10383) GN=Pa_6_5280 PE=3
SV=1
Length = 1567
Score = 30.4 bits (67), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 60 LPRSTCD-IIVTMQAQKEAPPDMQCKDKFLLQSV---KTNDGTTAKDINAEMFNKEA--- 112
LP S D IV + A KE P D+ LLQ + K NDG K + K
Sbjct: 325 LPTSLHDKRIVKLTAGKECPVDV------LLQKMGVDKKNDGRKKKVVLLSAIGKTYEPK 378
Query: 113 GHVVEECKLRVIYVSPPQPPSP-VPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERI 171
VVE+ +R++ +SP +P VP+G +P GS S + N A AA T RI
Sbjct: 379 ATVVEDRAIRIV-LSPSVRVTPGVPKGLNVSVTPPGSKSIS---NRALVLAAMGEGTTRI 434
Query: 172 E---HQDKSTEARALISKLK 188
+ H D + I++L+
Sbjct: 435 KGLLHSDDTHYMLTAIAQLQ 454
>sp|Q5RJS6|MSPD1_RAT Motile sperm domain-containing protein 1 OS=Rattus norvegicus
GN=Mospd1 PE=2 SV=1
Length = 213
Score = 30.4 bits (67), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 28 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIV 69
L L N + + FKV T P KY V G V P+ DI++
Sbjct: 38 LTLYNPYEFALKFKVLCTTPNKYVVIDAAGAVKPQCCVDIVI 79
>sp|P91499|SSP16_CAEEL Sperm-specific class P protein 16 OS=Caenorhabditis elegans
GN=ssp-16 PE=2 SV=1
Length = 109
Score = 30.4 bits (67), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 25 SCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQA 73
S + +L N + + FK+K++N +Y + P G V P + D+++T A
Sbjct: 18 SSTHKLVNGGADKLIFKIKSSNNNEYRIVPVFGFVDPSGSKDVVITRTA 66
>sp|Q5RCC7|MSPD1_PONAB Motile sperm domain-containing protein 1 OS=Pongo abelii
GN=MOSPD1 PE=2 SV=1
Length = 213
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 28 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQAQKEAPPDMQCKDKF 87
L L N + + FKV T P KY V G V P+ DI++ + + DKF
Sbjct: 38 LTLYNPYEFALKFKVLCTTPNKYVVVNAAGAVKPQCCVDIVIRHRDVRSC--HYGVIDKF 95
Query: 88 LLQ 90
LQ
Sbjct: 96 RLQ 98
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.128 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,148,606
Number of Sequences: 539616
Number of extensions: 3171216
Number of successful extensions: 10584
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 10499
Number of HSP's gapped (non-prelim): 113
length of query: 210
length of database: 191,569,459
effective HSP length: 112
effective length of query: 98
effective length of database: 131,132,467
effective search space: 12850981766
effective search space used: 12850981766
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)