BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028378
(210 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SCY5|KINB2_ARATH SNF1-related protein kinase regulatory subunit beta-2
OS=Arabidopsis thaliana GN=KINB2 PE=1 SV=1
Length = 289
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/181 (65%), Positives = 140/181 (77%), Gaps = 9/181 (4%)
Query: 1 MGNVNAREDG-SNSPSGVEE-------GESNNSVQEEGIIVPDGLMGQSPPHSPRATHSP 52
MGNVNARE+ SN+ S VE+ E+ ++ + + P LMGQSPPHSPRAT SP
Sbjct: 1 MGNVNAREEANSNNASAVEDEDAEICSREAMSAASDGNHVAPPELMGQSPPHSPRATQSP 60
Query: 53 LMFTPQVPVVPLQRPDEMQIPNLSWMQT-SSGYEDMGDGVGIPTMITWSHDGCEVAVEGS 111
LMF PQVPV+PLQRPDE+ IPN SWMQ+ SS YE+ + GIPTMITW H G E+AVEGS
Sbjct: 61 LMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASNEQGIPTMITWCHGGKEIAVEGS 120
Query: 112 WDNWKTRIALQRSGKDFTIMKVLPSGVYQYRFLVDGLWKYAPDLPSTQDDDGNVYNILDL 171
WDNWKTR LQRSGKDFTIMKVLPSGVY+YRF+VDG W++AP+LP +DD GN +NILDL
Sbjct: 121 WDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTFNILDL 180
Query: 172 Q 172
Q
Sbjct: 181 Q 181
>sp|Q84VQ1|KINB1_ARATH SNF1-related protein kinase regulatory subunit beta-1
OS=Arabidopsis thaliana GN=KINB1 PE=1 SV=1
Length = 283
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 87/127 (68%), Gaps = 4/127 (3%)
Query: 53 LMFTPQVPVVPLQRPDEMQIPNLSWMQTSSGYEDMGDGVGIPTMITWSHDGCEVAVEGSW 112
+F PQVPV PLQR + N+ W Q+ +++ + GIPT+ITW+ G +VAVEGSW
Sbjct: 61 FLFAPQVPVAPLQRANAPPPNNIQWNQSQRVFDNPPEQ-GIPTIITWNQGGNDVAVEGSW 119
Query: 113 DNWKTRIALQRSGKDFTIMKVLPSGVYQYRFLVDGLWKYAPDLPSTQDDDGNVYNILDLQ 172
DNW++R LQ+SGKD +I+ VLPSG+Y Y+ +VDG KY PDLP D+ GNV NILD+
Sbjct: 120 DNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDVH 179
Query: 173 VNITFIP 179
F+P
Sbjct: 180 ---NFVP 183
>sp|P78789|YC63_SCHPO Uncharacterized protein C1919.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1919.03c PE=1 SV=2
Length = 298
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 93 IPTMITWSHDGCEVAVEGSWDNWKTRIALQRSGKDFTIMKVLPSGVYQYRFLVDGLWKYA 152
+PT+I W G V V GS+ WK +I L +S +D+T++ L G +++FLVDG+W +
Sbjct: 99 VPTIIRWRGGGEVVYVTGSFSRWKKKIQLLKS-EDYTVLLQLRPGTQRFKFLVDGIWCCS 157
Query: 153 PDLPSTQDDDGNVYNILDLQVN 174
D P+ D +GN+YN L+++ N
Sbjct: 158 SDFPTATDAEGNLYNYLEVEAN 179
>sp|O43741|AAKB2_HUMAN 5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens
GN=PRKAB2 PE=1 SV=1
Length = 272
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 17/138 (12%)
Query: 44 HSPRATHSPLMFTPQVPVVPLQRPDEMQIPN----LSWMQTSSGYEDMGDGV-----GIP 94
H+P H ++ + P V PD ++P +SW Q D+ D V P
Sbjct: 27 HAPGKEHKIMVGSTDDPSV-FSLPDS-KLPGDKEFVSWQQ------DLEDSVKPTQQARP 78
Query: 95 TMITWSHDGCEVAVEGSWDNWKTRIALQRSGKDFTIMKVLPSGVYQYRFLVDGLWKYAPD 154
T+I WS G EV + GS++NW T+I L +S DF + LP G +QY+F VDG W + P
Sbjct: 79 TVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPS 138
Query: 155 LPSTQDDDGNVYNILDLQ 172
P G + N++ ++
Sbjct: 139 EPVVTSQLGTINNLIHVK 156
>sp|Q6PAM0|AAKB2_MOUSE 5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus
GN=Prkab2 PE=1 SV=1
Length = 271
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 85 EDMGDGV-----GIPTMITWSHDGCEVAVEGSWDNWKTRIALQRSGKDFTIMKVLPSGVY 139
+D+ D V PT+I WS G EV + GS++NW T+I L +S DF + LP G +
Sbjct: 63 QDLDDSVKPAQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEH 122
Query: 140 QYRFLVDGLWKYAPDLPSTQDDDGNVYNILDLQ 172
QY+F VDG W + P P G + N++ ++
Sbjct: 123 QYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVK 155
>sp|Q9QZH4|AAKB2_RAT 5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus
GN=Prkab2 PE=1 SV=1
Length = 271
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 85 EDMGDGV-----GIPTMITWSHDGCEVAVEGSWDNWKTRIALQRSGKDFTIMKVLPSGVY 139
+D+ D V PT+I WS G EV + GS++NW T+I L +S DF + LP G +
Sbjct: 63 QDLDDSVKPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEH 122
Query: 140 QYRFLVDGLWKYAPDLPSTQDDDGNVYNILDLQ 172
QY+F VDG W + P P G + N++ ++
Sbjct: 123 QYKFFVDGQWVHDPSEPVVTSQLGTINNLIHVK 155
>sp|P80387|AAKB1_PIG 5'-AMP-activated protein kinase subunit beta-1 (Fragment) OS=Sus
scrofa GN=PRKAB1 PE=1 SV=1
Length = 122
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 64 LQRPDEMQIPN----LSWMQTSSGYEDMGDGVGIPTMITWSHDGCEVAVEGSWDNWKTRI 119
L +E++ P L+W Q D PT+ W+ G EV + GS++NW +++
Sbjct: 11 LYHSEEIKAPEKEEFLAW-QHDLEVNDKASAQARPTVFRWTGGGKEVYLSGSFNNW-SKL 68
Query: 120 ALQRSGKDFTIMKVLPSGVYQYRFLVDGLWKYAPDLPSTQDDDGNVYNILDLQ 172
L RS +F + LP G +QY+FLVDG W + P P G V NI+ ++
Sbjct: 69 PLTRSHNNFVAILDLPEGEHQYKFLVDGQWTHDPSEPVVTSQLGTVNNIIQVK 121
>sp|Q5R801|AAKB1_PONAB 5'-AMP-activated protein kinase subunit beta-1 OS=Pongo abelii
GN=PRKAB1 PE=2 SV=3
Length = 270
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 75 LSWMQTSSGYEDMGDGVGIPTMITWSHDGCEVAVEGSWDNWKTRIALQRSGKDFTIMKVL 134
L+W Q D PT+ W+ G EV + GS++NW +++ L RS +F + L
Sbjct: 61 LAW-QRDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNW-SKLPLTRSHNNFVAILDL 118
Query: 135 PSGVYQYRFLVDGLWKYAPDLPSTQDDDGNVYNILDLQ 172
P G +QY+F VDG W + P P G V NI+ ++
Sbjct: 119 PEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVK 156
>sp|P80386|AAKB1_RAT 5'-AMP-activated protein kinase subunit beta-1 OS=Rattus norvegicus
GN=Prkab1 PE=1 SV=4
Length = 270
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 68 DEMQIPN----LSWMQTSSGYEDMGDGVGIPTMITWSHDGCEVAVEGSWDNWKTRIALQR 123
+EM+ P L+W Q + PT+ W+ G EV + GS++NW +++ L R
Sbjct: 50 EEMKAPEKEEFLAW-QHDLEVNEKAPAQARPTVFRWTGGGKEVYLSGSFNNW-SKLPLTR 107
Query: 124 SGKDFTIMKVLPSGVYQYRFLVDGLWKYAPDLPSTQDDDGNVYNILDLQ 172
S +F + LP G +QY+F VDG W + P P G V NI+ ++
Sbjct: 108 SQNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVK 156
>sp|Q9Y478|AAKB1_HUMAN 5'-AMP-activated protein kinase subunit beta-1 OS=Homo sapiens
GN=PRKAB1 PE=1 SV=4
Length = 270
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 75 LSWMQTSSGYEDMGDGVGIPTMITWSHDGCEVAVEGSWDNWKTRIALQRSGKDFTIMKVL 134
L+W Q D PT+ W+ G EV + GS++NW +++ L RS +F + L
Sbjct: 61 LAW-QHDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNW-SKLPLTRSHNNFVAILDL 118
Query: 135 PSGVYQYRFLVDGLWKYAPDLPSTQDDDGNVYNILDLQ 172
P G +QY+F VDG W + P P G V NI+ ++
Sbjct: 119 PEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVK 156
>sp|Q9R078|AAKB1_MOUSE 5'-AMP-activated protein kinase subunit beta-1 OS=Mus musculus
GN=Prkab1 PE=1 SV=2
Length = 270
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 75 LSWMQTSSGYEDMGDGVGIPTMITWSHDGCEVAVEGSWDNWKTRIALQRSGKDFTIMKVL 134
L+W Q D PT+ W+ G EV + GS++NW +++ L RS +F + L
Sbjct: 61 LAW-QHDLEANDKAPAQARPTVFRWTGGGKEVYLSGSFNNW-SKLPLTRSQNNFVAILDL 118
Query: 135 PSGVYQYRFLVDGLWKYAPDLPSTQDDDGNVYNILDLQ 172
P G +QY+F VDG W + P P G V NI+ ++
Sbjct: 119 PEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVK 156
>sp|Q5BIS9|AAKB1_BOVIN 5'-AMP-activated protein kinase subunit beta-1 OS=Bos taurus
GN=PRKAB1 PE=2 SV=3
Length = 270
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 75 LSWMQTSSGYEDMGDGVGIPTMITWSHDGCEVAVEGSWDNWKTRIALQRSGKDFTIMKVL 134
L+W Q D PT+ W+ G EV + GS++NW +++ L RS +F + L
Sbjct: 61 LAW-QHDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNW-SKLPLTRSHNNFVAILDL 118
Query: 135 PSGVYQYRFLVDGLWKYAPDLPSTQDDDGNVYNILDLQ 172
P G +QY+F VDG W + P P G V N++ ++
Sbjct: 119 PEGEHQYKFFVDGQWTHDPSEPVVTSQLGTVNNVIQVK 156
>sp|P34164|SIP2_YEAST SNF1 protein kinase subunit beta-2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SIP2 PE=1 SV=3
Length = 415
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 67 PDEMQIPNLSWMQTSSGYEDMGDGVGIPTMITWSHDGCEVAVEGSWDNWKTRIAL----Q 122
P E + + S G ++ + +P I W G +V V GS+ W+ I L
Sbjct: 138 PREEGQQQIRAKEASGGPSEIKSSLMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDSD 197
Query: 123 RSGKDFTIMKVLPSGVYQYRFLVDGLWKYAPDLPSTQDDDGNVYNILDLQ 172
+G +++LP G +++RF+VD + + LP+ D GN N ++++
Sbjct: 198 NNGSFHVKLRLLP-GTHRFRFIVDNELRVSDFLPTATDQMGNFVNYIEVR 246
>sp|Q04739|GAL83_YEAST SNF1 protein kinase subunit beta-3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GAL83 PE=1 SV=1
Length = 417
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 88 GDGVGIPTMITWSHDGCEVAVEGSWDNWKTRIALQRSGKDFTIMKV---LPSGVYQYRFL 144
G + P ITW G +V V GS+ W+ I L +M V LP G +++RF+
Sbjct: 157 GRAMMFPVDITWQQGGNKVYVTGSFTGWRKMIGLVPVPGQPGLMHVKLQLPPGTHRFRFI 216
Query: 145 VDGLWKYAPDLPSTQDDDGNVYNILDL 171
VD +++ LP+ D GN N +++
Sbjct: 217 VDNELRFSDYLPTATDQMGNFVNYMEV 243
>sp|F4J117|LSF1_ARATH Phosphoglucan phosphatase LSF1, chloroplastic OS=Arabidopsis
thaliana GN=LSF1 PE=1 SV=1
Length = 591
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 86 DMGDGVGIPT---MITWS-HDGCEVAVEGSWD-NWKTRI-ALQRSGKDFTIMKVLPSGVY 139
D G G PT W+ H+G EV + G + NWK I A + G F L G Y
Sbjct: 445 DDGKHDGTPTHSVTFVWNGHEGEEVLLVGDFTGNWKEPIKATHKGGPRFETEVRLTQGKY 504
Query: 140 QYRFLVDGLWKYAPDLPSTQDDDGNVYNIL 169
Y+++++G W+++ P+ +DD GN NI+
Sbjct: 505 YYKYIINGDWRHSATSPTERDDRGNTNNII 534
>sp|Q944A6|SNF4_ARATH Sucrose nonfermenting 4-like protein OS=Arabidopsis thaliana
GN=SNF4 PE=1 SV=1
Length = 487
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Query: 76 SWMQTSSGYEDMGDGVGIPTMITWSHDGCEVAVEGSWDNWKTRIA---LQRSGKDFTIMK 132
S + +S G + PT W + G V + GS+ W + L+ F ++
Sbjct: 4 STLDSSRGNSAASGQLLTPTRFVWPYGGRRVFLSGSFTRWTEHVPMSPLEGCPTVFQVIC 63
Query: 133 VLPSGVYQYRFLVDGLWKYAPDLPSTQDDDGNVYNIL 169
L G +QY+F VDG W++ P + G V I
Sbjct: 64 NLTPGYHQYKFFVDGEWRHDEHQPFVSGNGGVVNTIF 100
>sp|Q876L5|AKR1_SACBA Palmitoyltransferase AKR1 OS=Saccharomyces bayanus GN=AKR1 PE=3
SV=2
Length = 763
Score = 35.8 bits (81), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 139 YQYRFLVDGLWKYAPDLPSTQDDDGNVYNILDLQVNITFIPLYKYACFIVAVTCHSLLGF 198
Y Y ++VD L K+ D P+ DD G +N+L L VN + I L Y F +V LL
Sbjct: 152 YGYVYIVDFLLKHGAD-PTMTDDQG--FNLLHLSVNSSNIMLVLYVLF--SVVSKGLLDV 206
Query: 199 EC 200
+C
Sbjct: 207 DC 208
>sp|P39010|AKR1_YEAST Palmitoyltransferase AKR1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=AKR1 PE=1 SV=1
Length = 764
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 139 YQYRFLVDGLWKYAPDLPSTQDDDGNVYNILDLQVNITFIPLYKYACFIVAVTCHSLLGF 198
Y Y ++VD L K+ D P+ DD G +N+L L VN + I L Y F V LL
Sbjct: 153 YGYVYIVDFLLKHGAD-PTMTDDQG--FNLLHLSVNSSNIMLVLYVLF--NVVSKGLLDI 207
Query: 199 EC 200
+C
Sbjct: 208 DC 209
>sp|E7NIP0|CRP1_YEASO Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain FostersO) GN=CRP1 PE=3 SV=2
Length = 465
Score = 33.5 bits (75), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 98 TWSHDGCEVAVEGSWDNWKTRIALQRSGK-DFTIMKVLP------SGVYQYRFLVDGLW 149
+W +V + G++D+W+ + L ++ K +F I +P +Q++F+VDG+W
Sbjct: 12 SWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEI--TMPVKLANKDDTFQFKFIVDGVW 68
>sp|P38845|CRP1_YEAST Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CRP1 PE=1 SV=1
Length = 465
Score = 33.5 bits (75), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 98 TWSHDGCEVAVEGSWDNWKTRIALQRSGK-DFTIMKVLP------SGVYQYRFLVDGLW 149
+W +V + G++D+W+ + L ++ K +F I +P +Q++F+VDG+W
Sbjct: 12 SWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEI--TMPVKLANKDDTFQFKFIVDGVW 68
>sp|A6ZT54|CRP1_YEAS7 Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain YJM789) GN=CRP1 PE=3 SV=1
Length = 465
Score = 33.5 bits (75), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 98 TWSHDGCEVAVEGSWDNWKTRIALQRSGK-DFTIMKVLP------SGVYQYRFLVDGLW 149
+W +V + G++D+W+ + L ++ K +F I +P +Q++F+VDG+W
Sbjct: 12 SWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEI--TMPVKLANKDDTFQFKFIVDGVW 68
>sp|E7Q4T7|CRP1_YEASB Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain FostersB) GN=CRP1 PE=3 SV=1
Length = 465
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 98 TWSHDGCEVAVEGSWDNWKTRIALQRSGK-DFTIMKVLP------SGVYQYRFLVDGLW 149
+W +V + G++D+W+ + L ++ K +F I +P +Q++F+VDG+W
Sbjct: 12 SWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEI--TMPVKLXNKDDTFQFKFIVDGVW 68
>sp|C7GJZ2|CRP1_YEAS2 Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain JAY291) GN=CRP1 PE=3 SV=1
Length = 465
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 98 TWSHDGCEVAVEGSWDNWKTRIALQRSGK-DFTIMKVLP------SGVYQYRFLVDGLW 149
+W +V + G++D+W+ + L ++ K +F I +P +Q++F+VDG+W
Sbjct: 12 SWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEI--TMPVKLANKDDTFQFKFIVDGVW 68
>sp|P32578|SIP1_YEAST SNF1 protein kinase subunit beta-1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SIP1 PE=1 SV=2
Length = 815
Score = 33.5 bits (75), Expect = 1.0, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 25/38 (65%)
Query: 134 LPSGVYQYRFLVDGLWKYAPDLPSTQDDDGNVYNILDL 171
LP+G+Y+ +F ++G+ ++ LP+ D +GN N ++
Sbjct: 523 LPAGIYRLQFSINGILTHSNFLPTATDSEGNFVNWFEV 560
>sp|B3LFN4|SIP1_YEAS1 SNF1 protein kinase subunit beta-1 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=SIP1 PE=3 SV=2
Length = 815
Score = 33.5 bits (75), Expect = 1.0, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 25/38 (65%)
Query: 134 LPSGVYQYRFLVDGLWKYAPDLPSTQDDDGNVYNILDL 171
LP+G+Y+ +F ++G+ ++ LP+ D +GN N ++
Sbjct: 523 LPAGIYRLQFSINGILTHSNFLPTATDSEGNFVNWFEV 560
>sp|E7LVH4|CRP1_YEASV Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain VIN 13) GN=CRP1 PE=3 SV=2
Length = 465
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 98 TWSHDGCEVAVEGSWDNWKTRIALQRSGK-DFTIMKVLP------SGVYQYRFLVDGLW 149
+W +V + G++D+W+ + L ++ K +F I +P +Q++F+VDG+W
Sbjct: 12 SWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEI--TMPVKLANKDDTFQFKFIVDGVW 68
>sp|E7KDM2|CRP1_YEASA Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain AWRI796) GN=CRP1 PE=3 SV=2
Length = 465
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 98 TWSHDGCEVAVEGSWDNWKTRIALQRSGK-DFTIMKVLP------SGVYQYRFLVDGLW 149
+W +V + G++D+W+ + L ++ K +F I +P +Q++F+VDG+W
Sbjct: 12 SWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEI--TMPVKLANKDDTFQFKFIVDGVW 68
>sp|E7KPJ0|CRP1_YEASL Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain Lalvin QA23) GN=CRP1 PE=3 SV=2
Length = 465
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 98 TWSHDGCEVAVEGSWDNWKTRIALQRSGK-DFTIMKVLP------SGVYQYRFLVDGLW 149
+W +V + G++D+W+ + L ++ K +F I +P +Q++F+VDG+W
Sbjct: 12 SWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEI--TMPVKLANKDDTFQFKFIVDGVW 68
>sp|C8Z9U3|CRP1_YEAS8 Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse) GN=CRP1 PE=3
SV=1
Length = 465
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 98 TWSHDGCEVAVEGSWDNWKTRIALQRSGK-DFTIMKVLP------SGVYQYRFLVDGLW 149
+W +V + G++D+W+ + L ++ K +F I +P +Q++F+VDG+W
Sbjct: 12 SWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEI--TMPVKLANKDDTFQFKFIVDGVW 68
>sp|B3LSR0|CRP1_YEAS1 Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=CRP1 PE=3 SV=1
Length = 465
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 98 TWSHDGCEVAVEGSWDNWKTRIALQRSGK-DFTIMKVLP------SGVYQYRFLVDGLW 149
+W +V + G++D+W+ + L ++ K +F I +P +Q++F+VDG+W
Sbjct: 12 SWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEI--TMPVKLANKDDTFQFKFIVDGVW 68
>sp|A6ZZ19|SIP1_YEAS7 SNF1 protein kinase subunit beta-1 OS=Saccharomyces cerevisiae
(strain YJM789) GN=SIP1 PE=3 SV=2
Length = 815
Score = 33.5 bits (75), Expect = 1.1, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 25/38 (65%)
Query: 134 LPSGVYQYRFLVDGLWKYAPDLPSTQDDDGNVYNILDL 171
LP+G+Y+ +F ++G+ ++ LP+ D +GN N ++
Sbjct: 523 LPAGIYRLQFSINGILTHSNFLPTATDSEGNFVNWFEV 560
>sp|P52979|GLGB_RHIRD 1,4-alpha-glucan branching enzyme GlgB OS=Rhizobium radiobacter
GN=glgB PE=3 SV=2
Length = 734
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 89 DGVGIPTMITWSHDGCEVAVEGSWDNWKTRIALQRSGKDFTIMKVLPSGVY--QYRFLVD 146
+GV W+ +G V+V G ++NW R + R KD I ++ VY Y+F +
Sbjct: 142 EGVEGFHFAVWAPNGRRVSVVGDFNNWDGRRHVMRFRKDTGIWEIFAPDVYACAYKFEIL 201
Query: 147 G 147
G
Sbjct: 202 G 202
>sp|P0CA10|PRIM_ASFK5 Putative helicase/primase complex protein OS=African swine fever
virus (isolate Pig/Kenya/KEN-50/1950) GN=Ken-059 PE=3
SV=1
Length = 1048
Score = 31.6 bits (70), Expect = 3.6, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Query: 150 KYAPDLP-----STQDDDGNVYNILDLQVNITFIPLYK 182
K+ D P S +D+D NVYNILD+ +N+ Y+
Sbjct: 76 KFDIDFPVNKSYSEEDNDDNVYNILDIIINVIMDVFYE 113
>sp|Q9FEB5|DSP4_ARATH Phosphoglucan phosphatase DSP4, chloroplastic OS=Arabidopsis
thaliana GN=DSP4 PE=1 SV=1
Length = 379
Score = 30.4 bits (67), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 105 EVAVEGSWDNWKTRIALQ-RSGKDFTIMKV-LPSGVYQYRFLVDGLWKY 151
V + G W RI L G F I+K LP G ++Y++++DG W +
Sbjct: 268 RVEISGLDIGWGQRIPLTLDKGTGFWILKRELPEGQFEYKYIIDGEWTH 316
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,338,257
Number of Sequences: 539616
Number of extensions: 4091699
Number of successful extensions: 8642
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 8595
Number of HSP's gapped (non-prelim): 42
length of query: 210
length of database: 191,569,459
effective HSP length: 112
effective length of query: 98
effective length of database: 131,132,467
effective search space: 12850981766
effective search space used: 12850981766
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)