Query 028378
Match_columns 210
No_of_seqs 172 out of 830
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 17:27:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028378.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028378hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z0n_A 5'-AMP-activated protei 99.9 1.1E-26 3.8E-31 175.8 12.2 89 85-174 3-91 (96)
2 2qlv_B Protein SIP2, protein S 99.9 2E-25 7E-30 195.2 12.3 83 91-173 2-87 (252)
3 3nme_A Ptpkis1 protein, SEX4 g 99.9 6.3E-24 2.2E-28 187.6 10.3 83 91-173 168-254 (294)
4 4aee_A Alpha amylase, catalyti 99.7 6.4E-17 2.2E-21 156.3 10.5 104 91-195 16-127 (696)
5 4aef_A Neopullulanase (alpha-a 99.3 5.1E-12 1.8E-16 120.7 9.3 65 93-157 17-82 (645)
6 2z0b_A GDE5, KIAA1434, putativ 98.5 4.9E-07 1.7E-11 71.3 8.6 55 91-145 7-75 (131)
7 3c8d_A Enterochelin esterase; 98.1 9E-06 3.1E-10 73.3 9.3 85 92-177 30-155 (403)
8 1ac0_A Glucoamylase; hydrolase 98.1 2.3E-06 7.9E-11 64.7 3.9 56 91-146 5-74 (108)
9 1m7x_A 1,4-alpha-glucan branch 97.7 0.00012 4E-09 69.9 8.8 65 94-159 26-100 (617)
10 3aml_A OS06G0726400 protein; s 97.5 0.00017 5.7E-09 71.1 7.8 62 94-156 66-142 (755)
11 3k1d_A 1,4-alpha-glucan-branch 97.5 0.00019 6.6E-09 70.5 8.1 64 94-158 137-210 (722)
12 2laa_A Beta/alpha-amylase; SBD 97.0 0.0037 1.3E-07 47.8 8.8 63 93-156 5-76 (104)
13 2bhu_A Maltooligosyltrehalose 96.6 0.0053 1.8E-07 58.5 8.6 60 94-158 35-96 (602)
14 3vgf_A Malto-oligosyltrehalose 96.6 0.0026 8.8E-08 59.9 6.1 60 94-157 10-73 (558)
15 1bf2_A Isoamylase; hydrolase, 96.5 0.0034 1.2E-07 61.4 6.7 54 95-149 18-85 (750)
16 2vn4_A Glucoamylase; hydrolase 96.5 0.0083 2.9E-07 57.6 8.9 55 91-145 495-563 (599)
17 1wzl_A Alpha-amylase II; pullu 96.5 0.0068 2.3E-07 57.1 8.1 56 91-146 21-87 (585)
18 2wsk_A Glycogen debranching en 96.4 0.0085 2.9E-07 57.6 8.5 51 95-147 21-76 (657)
19 2vr5_A Glycogen operon protein 96.3 0.012 4E-07 57.4 8.7 53 94-148 30-90 (718)
20 3bmv_A Cyclomaltodextrin gluca 96.1 0.011 3.8E-07 56.8 7.2 55 91-145 582-651 (683)
21 1cyg_A Cyclodextrin glucanotra 96.0 0.024 8.2E-07 54.4 9.5 55 91-145 578-647 (680)
22 1j0h_A Neopullulanase; beta-al 96.0 0.0098 3.4E-07 56.1 6.6 57 90-146 20-89 (588)
23 1d3c_A Cyclodextrin glycosyltr 95.8 0.017 5.8E-07 55.5 7.3 55 91-145 585-654 (686)
24 1qho_A Alpha-amylase; glycosid 95.8 0.02 6.8E-07 55.1 7.8 56 90-145 579-653 (686)
25 2e8y_A AMYX protein, pullulana 95.6 0.028 9.6E-07 54.5 8.0 63 94-157 114-184 (718)
26 4aio_A Limit dextrinase; hydro 95.2 0.037 1.3E-06 53.4 7.5 61 95-156 138-213 (884)
27 1ea9_C Cyclomaltodextrinase; h 95.2 0.019 6.5E-07 54.1 5.1 56 91-146 21-86 (583)
28 1vem_A Beta-amylase; beta-alph 95.0 0.054 1.8E-06 51.2 7.7 56 90-145 417-485 (516)
29 2fhf_A Pullulanase; multiple d 95.0 0.044 1.5E-06 56.1 7.6 63 95-158 306-384 (1083)
30 2ya0_A Putative alkaline amylo 94.4 0.11 3.6E-06 50.4 8.3 63 95-157 26-105 (714)
31 3faw_A Reticulocyte binding pr 94.4 0.044 1.5E-06 54.9 5.7 63 95-157 146-223 (877)
32 3m07_A Putative alpha amylase; 94.4 0.15 5.1E-06 48.8 9.1 60 95-159 44-107 (618)
33 2wan_A Pullulanase; hydrolase, 94.3 0.09 3.1E-06 52.7 7.7 62 94-157 326-398 (921)
34 1ji1_A Alpha-amylase I; beta/a 93.7 0.052 1.8E-06 51.6 4.5 53 94-147 31-96 (637)
35 1gcy_A Glucan 1,4-alpha-maltot 93.3 0.015 5E-07 54.1 0.0 56 90-145 428-495 (527)
36 2wan_A Pullulanase; hydrolase, 92.2 0.33 1.1E-05 48.7 7.9 60 91-150 151-221 (921)
37 2ya1_A Putative alkaline amylo 91.9 0.28 9.4E-06 49.8 7.1 62 95-156 333-411 (1014)
38 2c3v_A Alpha-amylase G-6; carb 88.2 1.6 5.6E-05 32.9 7.0 63 92-155 9-80 (102)
39 4fch_A Outer membrane protein 82.0 1.7 5.7E-05 35.9 4.9 47 103-150 12-63 (221)
40 2jnz_A PHL P 3 allergen; timot 76.6 8.2 0.00028 29.3 6.8 58 92-152 27-90 (108)
41 2eef_A Protein phosphatase 1, 76.5 12 0.0004 30.1 8.0 58 91-148 46-122 (156)
42 2djm_A Glucoamylase A; beta sa 66.4 23 0.0008 26.6 7.2 57 92-148 20-91 (106)
43 4dny_A Metalloprotease STCE; m 60.5 7.9 0.00027 30.4 3.7 25 131-156 99-124 (126)
44 4fe9_A Outer membrane protein 59.3 14 0.00047 33.4 5.7 42 104-146 151-197 (470)
45 3ft1_A PHL P 3 allergen; beta- 56.0 41 0.0014 24.9 6.9 58 92-152 16-79 (100)
46 2fqm_A Phosphoprotein, P prote 49.0 16 0.00056 26.0 3.4 27 110-137 1-27 (75)
47 4aef_A Neopullulanase (alpha-a 46.1 33 0.0011 32.2 6.2 48 93-145 125-178 (645)
48 2vzp_A Aocbm35, EXO-beta-D-glu 37.8 24 0.00081 26.0 3.0 18 129-146 97-114 (127)
49 2w47_A Lipolytic enzyme, G-D-S 36.7 22 0.00075 27.0 2.8 19 129-147 98-116 (144)
50 2bem_A CBP21; chitin-binding p 33.1 1.4E+02 0.0049 23.9 7.2 68 94-171 76-166 (170)
51 4fe9_A Outer membrane protein 32.9 42 0.0014 30.2 4.4 50 103-153 260-319 (470)
52 1uy4_A Endo-1,4-beta-xylanase 32.7 26 0.00088 27.0 2.6 19 130-148 115-133 (145)
53 2r9f_A Calpain-1 catalytic sub 32.0 26 0.0009 30.9 2.8 24 135-158 120-146 (339)
54 1uxx_X Xylanase U; carbohydrat 30.3 17 0.00059 27.4 1.2 20 130-149 100-119 (133)
55 4a02_A EFCBM33A, CBM33, chitin 29.7 1.6E+02 0.0053 23.7 6.9 68 94-171 75-163 (166)
56 4fch_A Outer membrane protein 29.6 25 0.00085 28.7 2.1 46 104-149 117-169 (221)
57 2w3j_A Carbohydrate binding mo 29.2 37 0.0013 26.0 3.0 29 109-147 86-114 (145)
58 2nqa_A Calpain 8; calpain, cal 27.6 27 0.00091 30.6 2.1 24 135-158 115-141 (326)
59 1uxz_A Cellulase B; carbohydra 27.5 18 0.0006 27.2 0.8 17 130-146 100-116 (131)
60 4aee_A Alpha amylase, catalyti 26.9 89 0.003 29.7 5.7 52 92-146 133-187 (696)
61 2w87_A Esterase D, XYL-CBM35; 26.7 39 0.0013 25.6 2.7 29 109-147 88-116 (139)
62 4fem_A Outer membrane protein 26.7 78 0.0027 27.4 4.9 47 103-150 149-200 (358)
63 1ziv_A Calpain 9; cysteine pro 26.6 29 0.00099 30.6 2.1 24 135-158 119-145 (339)
64 1ew4_A CYAY protein; friedreic 26.0 1.1E+02 0.0036 22.8 4.9 36 119-155 49-84 (106)
65 1bxv_A Plastocyanin; copper pr 25.0 1.4E+02 0.0049 19.7 5.2 16 94-109 28-44 (91)
66 1od3_A Putative xylanase; hydr 24.9 42 0.0014 26.6 2.6 19 130-148 137-155 (168)
67 3fil_A Immunoglobulin G-bindin 23.8 17 0.00059 24.5 0.1 12 145-156 39-50 (56)
68 1w9s_A BH0236 protein, BHCBM6; 23.4 29 0.00098 26.3 1.3 19 130-148 107-125 (142)
69 1mhx_A Immunoglobulin-binding 23.2 29 0.00099 23.9 1.1 12 145-156 48-59 (65)
70 1igd_A Protein G; immunoglobul 23.1 22 0.00075 24.5 0.5 12 145-156 44-55 (61)
71 1xbr_A Protein (T protein); co 22.7 39 0.0013 27.6 2.0 26 127-153 47-73 (184)
72 1edn_A Endothelin-1; signal po 21.7 15 0.00053 21.3 -0.4 17 191-207 2-18 (26)
73 3mep_A Uncharacterized protein 21.1 1.3E+02 0.0043 24.1 4.8 58 93-151 83-143 (198)
74 1pcs_A Plastocyanin; electron 21.1 1.7E+02 0.0057 19.9 5.0 14 127-141 68-81 (98)
75 3d30_A YOAJ, expansin like pro 21.0 90 0.0031 25.6 4.0 43 104-150 139-182 (208)
76 2aan_A Auracyanin A; cupredoxi 20.7 1.5E+02 0.0051 21.8 4.9 19 92-110 42-64 (139)
No 1
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.94 E-value=1.1e-26 Score=175.77 Aligned_cols=89 Identities=33% Similarity=0.686 Sum_probs=78.9
Q ss_pred CCCCCCCceeEEEEEcCCCCeEEEEeecCCCccceeeeeeCCcEEEEEEcCCceEEEEEEEcCeeecCCCCCeeeCCCCC
Q 028378 85 EDMGDGVGIPTMITWSHDGCEVAVEGSWDNWKTRIALQRSGKDFTIMKVLPSGVYQYRFLVDGLWKYAPDLPSTQDDDGN 164 (210)
Q Consensus 85 ~~~~~~~~vpv~F~w~~~g~~V~V~GSFdnW~~~ipM~rs~~~f~i~l~Lp~G~YqYKFiVDG~W~~Dp~~P~~~D~~G~ 164 (210)
++++++++++|+|+|.+.|++|+|+|+||+|+ +++|+|+++.|++++.|++|.|+|||+|||+|++||.++++.|..|+
T Consensus 3 ~~~~~~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~~~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~~~~~~d~~G~ 81 (96)
T 1z0n_A 3 NEKAPAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTRSQNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGT 81 (96)
T ss_dssp -------CEEEEEEECSCCSCEEEEEGGGTTC-CEECEEETTEEEEEEEECSEEEEEEEEETTEEECCTTSCEEECTTSC
T ss_pred cccCCCCceEEEEEECCCCcEEEEEEEeCCCc-cccCEECCCEEEEEEEccCCCEEEEEEECCeEEcCCCCCeEECCCCC
Confidence 35577889999999999999999999999999 79999988899999999999999999999999999999999999999
Q ss_pred eeEEEEcCCC
Q 028378 165 VYNILDLQVN 174 (210)
Q Consensus 165 ~NNvI~V~d~ 174 (210)
.||+|.|.+.
T Consensus 82 ~Nnvi~V~~~ 91 (96)
T 1z0n_A 82 VNNIIQVKKT 91 (96)
T ss_dssp EEEEEEECSC
T ss_pred EeEEEEEcCC
Confidence 9999999754
No 2
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=99.92 E-value=2e-25 Score=195.16 Aligned_cols=83 Identities=29% Similarity=0.578 Sum_probs=78.4
Q ss_pred CceeEEEEEcCCCCeEEEEeecCCCccceeeeee---CCcEEEEEEcCCceEEEEEEEcCeeecCCCCCeeeCCCCCeeE
Q 028378 91 VGIPTMITWSHDGCEVAVEGSWDNWKTRIALQRS---GKDFTIMKVLPSGVYQYRFLVDGLWKYAPDLPSTQDDDGNVYN 167 (210)
Q Consensus 91 ~~vpv~F~w~~~g~~V~V~GSFdnW~~~ipM~rs---~~~f~i~l~Lp~G~YqYKFiVDG~W~~Dp~~P~~~D~~G~~NN 167 (210)
..+||+|+|.++|++|+|+|+|++|+.+++|+|+ ++.|++++.|++|+|+|||+|||+|++||+++++.|+.|+.||
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~~~d~~G~~nN 81 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDSDNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPTATDQMGNFVN 81 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECSSSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCEEBCSSCCCEE
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceeccCCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCEEecCCCcCcc
Confidence 4689999999999999999999999988999984 2579999999999999999999999999999999999999999
Q ss_pred EEEcCC
Q 028378 168 ILDLQV 173 (210)
Q Consensus 168 vI~V~d 173 (210)
+|.|.+
T Consensus 82 vi~V~~ 87 (252)
T 2qlv_B 82 YIEVRQ 87 (252)
T ss_dssp EEEECC
T ss_pred eeeccC
Confidence 999987
No 3
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.90 E-value=6.3e-24 Score=187.58 Aligned_cols=83 Identities=22% Similarity=0.403 Sum_probs=77.7
Q ss_pred CceeEEEEEcC-CCCeEEEEeecCCCccceeeeee--CCcEEEEEEcCCceEEEEEEEcCeeecCCCCCee-eCCCCCee
Q 028378 91 VGIPTMITWSH-DGCEVAVEGSWDNWKTRIALQRS--GKDFTIMKVLPSGVYQYRFLVDGLWKYAPDLPST-QDDDGNVY 166 (210)
Q Consensus 91 ~~vpv~F~w~~-~g~~V~V~GSFdnW~~~ipM~rs--~~~f~i~l~Lp~G~YqYKFiVDG~W~~Dp~~P~~-~D~~G~~N 166 (210)
.+.+|+|+|.. ++++|+|+||||||+.+++|+|. ++.|++++.|++|+|+|||+|||+|++||++|.+ .|+.|++|
T Consensus 168 ~k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~~~~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~~~~~d~~G~~n 247 (294)
T 3nme_A 168 KRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLGKGTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFIGPNKDGHTN 247 (294)
T ss_dssp CCEEEEEEEECSSCSCEEEEETTTEEEEEEECEECTTTCEEEEEEEECSEEEEEEEEETTEEECCTTSCEECSCTTSCCE
T ss_pred ccccceeeeccCCCCEEEEEEeccCCCCcccceEcCCCCEEEEEEECCCceEEEEEEECCEEeeCCCCCeeeECCCCCEe
Confidence 46899999998 88999999999999988999994 5789999999999999999999999999999965 79999999
Q ss_pred EEEEcCC
Q 028378 167 NILDLQV 173 (210)
Q Consensus 167 NvI~V~d 173 (210)
|+|.|.+
T Consensus 248 n~~~v~~ 254 (294)
T 3nme_A 248 NYAKVVD 254 (294)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9999997
No 4
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.69 E-value=6.4e-17 Score=156.29 Aligned_cols=104 Identities=13% Similarity=0.057 Sum_probs=79.7
Q ss_pred CceeEEEEEcC--CCCeEEEEeecCCCcc-ceeeeeeCCcEEEEEEcCCceEEEEEEEcCeee--cCCCCC---eeeCCC
Q 028378 91 VGIPTMITWSH--DGCEVAVEGSWDNWKT-RIALQRSGKDFTIMKVLPSGVYQYRFLVDGLWK--YAPDLP---STQDDD 162 (210)
Q Consensus 91 ~~vpv~F~w~~--~g~~V~V~GSFdnW~~-~ipM~rs~~~f~i~l~Lp~G~YqYKFiVDG~W~--~Dp~~P---~~~D~~ 162 (210)
..++|+|++.. +|++|+|+||||+|++ ..+|+|+++.|++++.||+|+|||||+|||+|+ +||++| ++.|..
T Consensus 16 ~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~~~~~~~~~~~L~~g~~~y~f~vdg~~~~~~d~~~~~~~y~~~~~ 95 (696)
T 4aee_A 16 GRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRKIEEQGIVYLKLWPGEYGYGFQIDNDFENVLDPDNEEKKCVHTSF 95 (696)
T ss_dssp EEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEEETTEEEEEEEECSEEEEEEEEETTCCSCCCCTTCCCEEEEECSS
T ss_pred CcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEecCCeEEEEEEcCCceEEEEEEECCEEeecCCCCCCcccccccCC
Confidence 45788888775 7999999999999975 579999988999999999999999999999999 889888 467899
Q ss_pred CCeeEEEEcCCCccccchhhhhhhhhccCcCcc
Q 028378 163 GNVYNILDLQVNITFIPLYKYACFIVAVTCHSL 195 (210)
Q Consensus 163 G~~NNvI~V~d~vpe~p~~~~~~~~~~~tp~s~ 195 (210)
|..|+|.. ...+-+.|..+..++....+++-+
T Consensus 96 g~~n~~~~-~~~~~~~~~~~~~~i~h~~~~~y~ 127 (696)
T 4aee_A 96 FPEYKKCL-SKLVIKEPDNPLDKIIHIEESGFI 127 (696)
T ss_dssp CTTSEEEE-EEEEECCCSSGGGGCBCCSSTTTE
T ss_pred ccccceec-cceEEEcCCCCccceEeCCCCCce
Confidence 99999842 223222332233444444444333
No 5
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.30 E-value=5.1e-12 Score=120.69 Aligned_cols=65 Identities=25% Similarity=0.568 Sum_probs=59.3
Q ss_pred eeEEEEEcCCCCeEEEEeecCCCcc-ceeeeeeCCcEEEEEEcCCceEEEEEEEcCeeecCCCCCe
Q 028378 93 IPTMITWSHDGCEVAVEGSWDNWKT-RIALQRSGKDFTIMKVLPSGVYQYRFLVDGLWKYAPDLPS 157 (210)
Q Consensus 93 vpv~F~w~~~g~~V~V~GSFdnW~~-~ipM~rs~~~f~i~l~Lp~G~YqYKFiVDG~W~~Dp~~P~ 157 (210)
.-|.|.+...++.|+|.|+||+|.. ..+|++.++.|.+++.||||+|+|||+|||+|+.||.+|.
T Consensus 17 ~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~~g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~ 82 (645)
T 4aef_A 17 AEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQEGKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPE 82 (645)
T ss_dssp EEEEEEEECCSSCEEEEETTTTTCTTSSEEEECSSEEEEEEEECSEEEEEEEEETTEEECCTTCCC
T ss_pred EEEEEecCCCCeEEEEEEcCCCCCCCcccceEcCCEEEEEEEeCCceEEEEEEECCeEecCCCCCC
Confidence 4677888888999999999999986 4789998889999999999999999999999999999984
No 6
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.48 E-value=4.9e-07 Score=71.32 Aligned_cols=55 Identities=25% Similarity=0.328 Sum_probs=46.5
Q ss_pred CceeEEEEEcC---CCCeEEEEee---cCCCcc--ceeeeee----C-CcEEEEEEcCCc-eEEEEEEE
Q 028378 91 VGIPTMITWSH---DGCEVAVEGS---WDNWKT--RIALQRS----G-KDFTIMKVLPSG-VYQYRFLV 145 (210)
Q Consensus 91 ~~vpv~F~w~~---~g~~V~V~GS---FdnW~~--~ipM~rs----~-~~f~i~l~Lp~G-~YqYKFiV 145 (210)
..+.|+|+... .++.|+|+|| +.+|++ .++|.+. . ..|++++.||.| .++|||++
T Consensus 7 ~~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~~~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 7 GPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp CCEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECCTTCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred CeEEEEEEEeeecCCCCEEEEEeCCCcCCCCCccccccccccccCCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 45788888773 5789999999 899997 4689886 3 479999999988 69999999
No 7
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=98.12 E-value=9e-06 Score=73.25 Aligned_cols=85 Identities=20% Similarity=0.189 Sum_probs=64.7
Q ss_pred ceeEEEEEcC-CC-------CeEEEE--eecC---CCccceeeeee-C-CcEEEEEEcCCceE-EEEEEEc---------
Q 028378 92 GIPTMITWSH-DG-------CEVAVE--GSWD---NWKTRIALQRS-G-KDFTIMKVLPSGVY-QYRFLVD--------- 146 (210)
Q Consensus 92 ~vpv~F~w~~-~g-------~~V~V~--GSFd---nW~~~ipM~rs-~-~~f~i~l~Lp~G~Y-qYKFiVD--------- 146 (210)
...|||.|.. .+ ++|+|. |..+ +|. ..+|+|. + +.|+.++.|+++-| .|+|+||
T Consensus 30 ~~~vtF~~~~p~a~~~~~~~~~V~~~~~~~~d~~~~~~-~~~m~r~~~~~~W~~t~~l~~~~~~~Y~~~~~~~~~~~~~~ 108 (403)
T 3c8d_A 30 MFEVTFWWRDPQGSEEYSTIKRVWVYITGVTDHHQNSQ-PQSMQRIAGTDVWQWTTQLNANWRGSYCFIPTERDDIFSAP 108 (403)
T ss_dssp EEEEEEEEECTTCSTTTCCCCEEEEEETTTC--------CCBCEECTTSSEEEEEEEEETTCEEEEEEEEESCCSTTCCC
T ss_pred cEEEEEEeeCCCcccccCccceEEEECcCCCccccccC-ccccccCCCCCeEEEEEEECCCcEEEEEEEecCcccccccc
Confidence 4689999995 55 799998 4333 222 2579994 3 57999999999999 9999999
Q ss_pred ---------------CeeecCCCCCeeeC-CCCCeeEEEEcCCCccc
Q 028378 147 ---------------GLWKYAPDLPSTQD-DDGNVYNILDLQVNITF 177 (210)
Q Consensus 147 ---------------G~W~~Dp~~P~~~D-~~G~~NNvI~V~d~vpe 177 (210)
|..+.||.++.... ..|...|+|++.+..+.
T Consensus 109 ~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~p~~~~~ 155 (403)
T 3c8d_A 109 SPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEMPQAPLQ 155 (403)
T ss_dssp --CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEECTTCCCC
T ss_pred cchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccCCCCCcC
Confidence 77889999996643 44888999999876443
No 8
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=98.08 E-value=2.3e-06 Score=64.67 Aligned_cols=56 Identities=23% Similarity=0.484 Sum_probs=45.3
Q ss_pred CceeEEEEEcC---CCCeEEEEeec---CCCcc--ceeeeee-----CCcEEEEEEcCCc-eEEEEEEEc
Q 028378 91 VGIPTMITWSH---DGCEVAVEGSW---DNWKT--RIALQRS-----GKDFTIMKVLPSG-VYQYRFLVD 146 (210)
Q Consensus 91 ~~vpv~F~w~~---~g~~V~V~GSF---dnW~~--~ipM~rs-----~~~f~i~l~Lp~G-~YqYKFiVD 146 (210)
..+.|+|+... .|++|+|+||. .+|+. .++|.+. +..|++++.||.| .++|||+|.
T Consensus 5 ~~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~v~ 74 (108)
T 1ac0_A 5 TAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIRI 74 (108)
T ss_dssp CCCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSSSSSSCSSCEEEECCCSSSCEECCCEEC
T ss_pred CeEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccccCCcCCeEEEEEEeCCCCeEEEEEEEE
Confidence 45788888764 57899999985 58996 4689875 2579999999998 599999993
No 9
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.66 E-value=0.00012 Score=69.87 Aligned_cols=65 Identities=20% Similarity=0.402 Sum_probs=51.0
Q ss_pred eEEEE-EcCCCCeEEEEeecCCCcc-ceeeee--eCCcEEEEEE-cCCceEEEEEEE---cCee--ecCCCCCeee
Q 028378 94 PTMIT-WSHDGCEVAVEGSWDNWKT-RIALQR--SGKDFTIMKV-LPSGVYQYRFLV---DGLW--KYAPDLPSTQ 159 (210)
Q Consensus 94 pv~F~-w~~~g~~V~V~GSFdnW~~-~ipM~r--s~~~f~i~l~-Lp~G~YqYKFiV---DG~W--~~Dp~~P~~~ 159 (210)
-|+|+ |.+.+++|.|.|+|++|+. +++|++ .++.|++.+. +.+|. .|||.| ||.+ +.||-.....
T Consensus 26 gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~~~~GvW~~~v~~~~~g~-~Y~f~i~~~~g~~~~~~DPya~~~~ 100 (617)
T 1m7x_A 26 GTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLRKESGIWELFIPGAHNGQ-LYKYEMIDANGNLRLKSDPYAFEAQ 100 (617)
T ss_dssp EEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCCTTTTEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCSSEE
T ss_pred cEEEEEECCCCCEEEEEEEeCCCCCceeEeEECCCCCEEEEEEcCCCCCC-EEEEEEEcCCCcEEEecCccceeec
Confidence 47884 8899999999999999975 579986 3468999987 67887 499988 6774 5777665443
No 10
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=97.52 E-value=0.00017 Score=71.07 Aligned_cols=62 Identities=18% Similarity=0.476 Sum_probs=48.4
Q ss_pred eEEE-EEcCCCCeEEEEeecCCCcc-ceeeeeeC-CcEEEEEE-------cCCceEEEEEEEc---Cee--ecCCCCC
Q 028378 94 PTMI-TWSHDGCEVAVEGSWDNWKT-RIALQRSG-KDFTIMKV-------LPSGVYQYRFLVD---GLW--KYAPDLP 156 (210)
Q Consensus 94 pv~F-~w~~~g~~V~V~GSFdnW~~-~ipM~rs~-~~f~i~l~-------Lp~G~YqYKFiVD---G~W--~~Dp~~P 156 (210)
-|+| .|.+.+++|.|+|+|++|+. +++|.|.. +.|.+.+. +.+|.+ |||.|+ |.| +.||-..
T Consensus 66 gv~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~~~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~~~g~~~~~~dpya~ 142 (755)
T 3aml_A 66 ATIYREWAPAAQEAQLIGEFNNWNGAKHKMEKDKFGIWSIKISHVNGKPAIPHNSK-VKFRFRHGGGAWVDRIPAWIR 142 (755)
T ss_dssp EEEEEEECTTCSEEEEEEGGGTTCCTTCBCEECTTSEEEEEEECBTTBCSSCTTEE-EEEEEECTTCCCEEECCTTCS
T ss_pred eEEEEEECCCCCEEEEEEecCCCCCceeeceeCCCCEEEEEEcccccccCCCCCCE-EEEEEECCCCcEEecCCcchh
Confidence 3678 59999999999999999985 58999865 68999988 677764 888886 455 3477554
No 11
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=97.51 E-value=0.00019 Score=70.46 Aligned_cols=64 Identities=19% Similarity=0.398 Sum_probs=50.3
Q ss_pred eEEE-EEcCCCCeEEEEeecCCCcc-ceeeeee--CCcEEEEEE-cCCceEEEEEEE---cCee--ecCCCCCee
Q 028378 94 PTMI-TWSHDGCEVAVEGSWDNWKT-RIALQRS--GKDFTIMKV-LPSGVYQYRFLV---DGLW--KYAPDLPST 158 (210)
Q Consensus 94 pv~F-~w~~~g~~V~V~GSFdnW~~-~ipM~rs--~~~f~i~l~-Lp~G~YqYKFiV---DG~W--~~Dp~~P~~ 158 (210)
-|+| +|.+.+++|.|+|+||+|+. ..+|++. .+.|.+.+. +.+|. .|||.| ||++ +.||-...+
T Consensus 137 g~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~~~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~~DPya~~~ 210 (722)
T 3k1d_A 137 GVSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVLGPSGVWELFWPDFPCDG-LYKFRVHGADGVVTDRADPFAFGT 210 (722)
T ss_dssp EEEEEEECTTCSEEEEEEGGGTTCCCSCBCEECGGGCEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCSSB
T ss_pred eEEEEEECCCCCEEEEEeecCCCCCCcccCEEcCCCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEeecccceee
Confidence 3678 59999999999999999986 4799874 368999886 77884 577777 5664 678877644
No 12
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=97.02 E-value=0.0037 Score=47.83 Aligned_cols=63 Identities=14% Similarity=0.190 Sum_probs=50.3
Q ss_pred eeEEEEEcCCCCeEEEEeecC--CCcc--ceeeeeeC-CcE-EEEEEcCCc-eEEEEEEEcCe--eecCCCCC
Q 028378 93 IPTMITWSHDGCEVAVEGSWD--NWKT--RIALQRSG-KDF-TIMKVLPSG-VYQYRFLVDGL--WKYAPDLP 156 (210)
Q Consensus 93 vpv~F~w~~~g~~V~V~GSFd--nW~~--~ipM~rs~-~~f-~i~l~Lp~G-~YqYKFiVDG~--W~~Dp~~P 156 (210)
-.|+|.|+.+.++|+|-..+. +|+. .++|.+.. ..| +++|.|+.+ .++|+|. ||. |-.+...-
T Consensus 5 ~~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~~~~gw~~~TI~l~~g~~~~~~F~-dG~~~WDNn~g~N 76 (104)
T 2laa_A 5 NKVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDAEISGYAKITVDIGSASQLEAAFN-DGNNNWDSNNTKN 76 (104)
T ss_dssp CEEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEETTTTEEEEEEECTTCSCEEEEEE-CSSSCEESTTTSC
T ss_pred CEEEEEEcCCCCcEEEEEcCCCCCCCcCCccccccccCCCeEEEEEECCCCCEEEEEEe-CCCCcCcCCCCcc
Confidence 467888888899999999985 8996 46899886 578 599999976 8999996 765 87765543
No 13
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=96.63 E-value=0.0053 Score=58.49 Aligned_cols=60 Identities=22% Similarity=0.256 Sum_probs=48.3
Q ss_pred eEEE-EEcCCCCeEEEEeecCCCccceeeeee-CCcEEEEEEcCCceEEEEEEEcCeeecCCCCCee
Q 028378 94 PTMI-TWSHDGCEVAVEGSWDNWKTRIALQRS-GKDFTIMKVLPSGVYQYRFLVDGLWKYAPDLPST 158 (210)
Q Consensus 94 pv~F-~w~~~g~~V~V~GSFdnW~~~ipM~rs-~~~f~i~l~Lp~G~YqYKFiVDG~W~~Dp~~P~~ 158 (210)
-|+| .|.+.+++|.|.++ . ..++|++. ++.|++.+.+.+|.+ |+|.|||..+.||.....
T Consensus 35 ~~~f~vwap~a~~v~l~~~---~-~~~~m~~~~~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~~ 96 (602)
T 2bhu_A 35 GTRFRLWTSTARTVAVRVN---G-TEHVMTSLGGGIYELELPVGPGAR-YLFVLDGVPTPDPYARFL 96 (602)
T ss_dssp CEEEEEECSSCSSEEEEET---T-EEEECEEEETTEEEEEESCCTTCE-EEEEETTEEECCTTCSCC
T ss_pred eEEEEEECCCCCEEEEEEc---C-CEEeCeeCCCcEEEEEEECCCCcE-EEEEECCeEecCCCcccc
Confidence 4678 48999999999994 2 46899985 568999988888886 999999977788876644
No 14
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=96.61 E-value=0.0026 Score=59.93 Aligned_cols=60 Identities=15% Similarity=0.164 Sum_probs=49.3
Q ss_pred eEEE-EEcCCCCeEEEEeecCCCccceeeeeeC-CcEEEEEE-cCCceEEEEEEEcCe-eecCCCCCe
Q 028378 94 PTMI-TWSHDGCEVAVEGSWDNWKTRIALQRSG-KDFTIMKV-LPSGVYQYRFLVDGL-WKYAPDLPS 157 (210)
Q Consensus 94 pv~F-~w~~~g~~V~V~GSFdnW~~~ipM~rs~-~~f~i~l~-Lp~G~YqYKFiVDG~-W~~Dp~~P~ 157 (210)
-|+| .|.+.+++|.|.+.++ ..++|++.+ +.|++.+. +.+|. .|||.|||. .+.||....
T Consensus 10 ~~~f~vwap~a~~v~l~~~~~---~~~~m~~~~~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~~ 73 (558)
T 3vgf_A 10 EVIFTLWAPYQKSVKLKVLEK---GLYEMERDEKGYFTITLNNVKVRD-RYKYVLDDASEIPDPASRY 73 (558)
T ss_dssp EEEEEEECTTCSCCEEEETTT---EEEECEECTTCEEEEEESSCCTTC-EEEEECTTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEEecC---ceeecccCCCCEEEEEECCCCCCC-EEEEEEeCCccccCcchhh
Confidence 3678 5899999999999987 568999865 58999886 77885 699999987 788886653
No 15
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=96.54 E-value=0.0034 Score=61.40 Aligned_cols=54 Identities=9% Similarity=0.105 Sum_probs=43.9
Q ss_pred EEE-EEcCCCCeEEEEeecCCCc-----cceeeeee-CCcEEEEEE-cC------CceEEEEEEEcCee
Q 028378 95 TMI-TWSHDGCEVAVEGSWDNWK-----TRIALQRS-GKDFTIMKV-LP------SGVYQYRFLVDGLW 149 (210)
Q Consensus 95 v~F-~w~~~g~~V~V~GSFdnW~-----~~ipM~rs-~~~f~i~l~-Lp------~G~YqYKFiVDG~W 149 (210)
|+| .|.+.+++|.|.+ |++|. .+++|.+. ++.|.+.+. +. +|.|.|+|.|+|.|
T Consensus 18 ~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~~~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g~~ 85 (750)
T 1bf2_A 18 ITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPAGSGVWAVTVPVSSIKAAGITGAVYYGYRAWGPN 85 (750)
T ss_dssp EEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEECSTTEEEEEEEHHHHHHTTCCSCCEEEEEEEBTT
T ss_pred EEEEEECCCCCEEEEEE-EccCCCCccceEEecccCCCCEEEEEECCcccccccCCCCEEEEEEEEeee
Confidence 678 4899999999998 88764 35789875 468999876 66 89999999999753
No 16
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=96.48 E-value=0.0083 Score=57.63 Aligned_cols=55 Identities=24% Similarity=0.335 Sum_probs=45.5
Q ss_pred CceeEEEEEcC---CCCeEEEEeecC---CCcc--ceeeeeeC-----CcEEEEEEcCCc-eEEEEEEE
Q 028378 91 VGIPTMITWSH---DGCEVAVEGSWD---NWKT--RIALQRSG-----KDFTIMKVLPSG-VYQYRFLV 145 (210)
Q Consensus 91 ~~vpv~F~w~~---~g~~V~V~GSFd---nW~~--~ipM~rs~-----~~f~i~l~Lp~G-~YqYKFiV 145 (210)
..+.|+|+... .|++|+|+|+-. +|+. .++|...+ ..|++++.||.| .++|||+|
T Consensus 495 ~~v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~~t~~~~~W~~~v~lp~~~~~eYKyvv 563 (599)
T 2vn4_A 495 TSVAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVNYADNHPLWIGTVNLEAGDVVEYKYIN 563 (599)
T ss_dssp SEEEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTTCBTTBCEEEEEEEEETTCEEEEEEEE
T ss_pred CeEEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeecccccCCCCCCcEEEEEEcCCCCcEEEEEEE
Confidence 45788888763 689999999874 7996 47898765 589999999988 59999998
No 17
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=96.46 E-value=0.0068 Score=57.11 Aligned_cols=56 Identities=13% Similarity=0.115 Sum_probs=44.6
Q ss_pred CceeEEE-EEcCCCCeEEE-EeecCCCcc----ceeeeeeC--C---cEEEEEEcCCceEEEEEEEc
Q 028378 91 VGIPTMI-TWSHDGCEVAV-EGSWDNWKT----RIALQRSG--K---DFTIMKVLPSGVYQYRFLVD 146 (210)
Q Consensus 91 ~~vpv~F-~w~~~g~~V~V-~GSFdnW~~----~ipM~rs~--~---~f~i~l~Lp~G~YqYKFiVD 146 (210)
..+.++| +|.+.+++|.| .|+|++|+. .++|+|.+ + .|++.+......+.|||.|.
T Consensus 21 ~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 21 TQLRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAGSDERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp TEEEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEEECSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CEEEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEeecCCCEEEEEEEEECCCCeEEEEEEEE
Confidence 4566667 47789999999 899999964 57998742 3 49999988777789999985
No 18
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=96.42 E-value=0.0085 Score=57.60 Aligned_cols=51 Identities=22% Similarity=0.227 Sum_probs=41.7
Q ss_pred EEE-EEcCCCCeEEEEeecCCCc--cceeeee-eCCcEEEEEE-cCCceEEEEEEEcC
Q 028378 95 TMI-TWSHDGCEVAVEGSWDNWK--TRIALQR-SGKDFTIMKV-LPSGVYQYRFLVDG 147 (210)
Q Consensus 95 v~F-~w~~~g~~V~V~GSFdnW~--~~ipM~r-s~~~f~i~l~-Lp~G~YqYKFiVDG 147 (210)
|+| .|.+.+++|.|.+ |+++. .+++|.+ .++.|.+.+. +.+|.+ |+|.|+|
T Consensus 21 ~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~~~~g~w~~~v~~~~~g~~-Y~y~v~~ 76 (657)
T 2wsk_A 21 VNFTLFSAHAERVELCV-FDANGQEHRYDLPGHSGDIWHGYLPDARPGLR-YGYRVHG 76 (657)
T ss_dssp EEEEEECSSCSEEEEEE-ECTTCCEEEEECCEEETTEEEEEEETCCTTCE-EEEEEEC
T ss_pred EEEEEECCCCCEEEEEE-ECCCCCEEEEeCcCCCCCEEEEEECCCCCCCE-EEEEEee
Confidence 778 4899999999999 88765 3689975 4678999875 678876 9999988
No 19
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=96.28 E-value=0.012 Score=57.38 Aligned_cols=53 Identities=17% Similarity=0.231 Sum_probs=42.1
Q ss_pred eEEE-EEcCCCCeEEEEeecCCCc-----cceeeeee-CCcEEEEEE-cCCceEEEEEEEcCe
Q 028378 94 PTMI-TWSHDGCEVAVEGSWDNWK-----TRIALQRS-GKDFTIMKV-LPSGVYQYRFLVDGL 148 (210)
Q Consensus 94 pv~F-~w~~~g~~V~V~GSFdnW~-----~~ipM~rs-~~~f~i~l~-Lp~G~YqYKFiVDG~ 148 (210)
-|+| .|.+.+++|.|.+ |+.+. .+++|.+. ++.|.+.+. +.+|.+ |+|.|+|.
T Consensus 30 g~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~~~~gvw~~~v~~~~~g~~-Y~y~v~g~ 90 (718)
T 2vr5_A 30 GVNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKNKTGDIWHVFVPGLRPGQL-YAYRVYGP 90 (718)
T ss_dssp EEEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECEESSSEEEEEEETCCTTCE-EEEEEECC
T ss_pred eEEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCccCCCCEEEEEeCCCCCCCE-EEEEEeee
Confidence 3678 4899999999999 86543 25889875 468999875 778887 99999984
No 20
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=96.06 E-value=0.011 Score=56.78 Aligned_cols=55 Identities=22% Similarity=0.333 Sum_probs=45.4
Q ss_pred CceeEEEEEcC----CCCeEEEEeecC---CCcc--ce-eeee---e-CCcEEEEEEcCCc-eEEEEEEE
Q 028378 91 VGIPTMITWSH----DGCEVAVEGSWD---NWKT--RI-ALQR---S-GKDFTIMKVLPSG-VYQYRFLV 145 (210)
Q Consensus 91 ~~vpv~F~w~~----~g~~V~V~GSFd---nW~~--~i-pM~r---s-~~~f~i~l~Lp~G-~YqYKFiV 145 (210)
..++|+|+... .|+.|+|+||-. +|++ .+ +|.. . ...|++++.||.| .++|||++
T Consensus 582 ~~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~ 651 (683)
T 3bmv_A 582 NQICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQVVYQYPTWYYDVSVPAGTTIQFKFIK 651 (683)
T ss_dssp SEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSSSSCTTSEEEEEEEETTCEEEEEEEE
T ss_pred CeEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccCCCCCCcEEEEEEeCCCCcEEEEEEE
Confidence 46889998763 589999999886 8996 46 7877 3 3589999999988 79999998
No 21
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=96.04 E-value=0.024 Score=54.41 Aligned_cols=55 Identities=18% Similarity=0.367 Sum_probs=45.0
Q ss_pred CceeEEEEEcC----CCCeEEEEeecC---CCccc--e-eeee---eC-CcEEEEEEcCCc-eEEEEEEE
Q 028378 91 VGIPTMITWSH----DGCEVAVEGSWD---NWKTR--I-ALQR---SG-KDFTIMKVLPSG-VYQYRFLV 145 (210)
Q Consensus 91 ~~vpv~F~w~~----~g~~V~V~GSFd---nW~~~--i-pM~r---s~-~~f~i~l~Lp~G-~YqYKFiV 145 (210)
..++|+|+... .|+.|+|+||-. +|++. + +|.. .. ..|++++.||.| .++|||++
T Consensus 578 ~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~v~ 647 (680)
T 1cyg_A 578 DQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQVVYSYPTWYIDVSVPEGKTIEFKFIK 647 (680)
T ss_dssp CEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSSSSCTTCEEEEEEEESSCEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCcEEEEEEeCCCCcEEEEEEE
Confidence 56889998753 588999999875 89973 5 6876 33 479999999988 79999998
No 22
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=96.02 E-value=0.0098 Score=56.07 Aligned_cols=57 Identities=14% Similarity=0.251 Sum_probs=44.9
Q ss_pred CCceeEEEE-EcCCCCeEEE-EeecCCCcc------ceeeeeeC--C---cEEEEEEcCCceEEEEEEEc
Q 028378 90 GVGIPTMIT-WSHDGCEVAV-EGSWDNWKT------RIALQRSG--K---DFTIMKVLPSGVYQYRFLVD 146 (210)
Q Consensus 90 ~~~vpv~F~-w~~~g~~V~V-~GSFdnW~~------~ipM~rs~--~---~f~i~l~Lp~G~YqYKFiVD 146 (210)
...+.++|+ |...+++|.| .|+|++|+. .++|+|.+ + .|++.+......+.|||.|+
T Consensus 20 ~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~~~~~~~~w~~~v~~~~~~~~Y~f~i~ 89 (588)
T 1j0h_A 20 SETLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTGSDELFDYWFAEVKPPYRRLRYGFVLY 89 (588)
T ss_dssp SSCEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEEECSSEEEEEEEECCTTSCEEEEEEEE
T ss_pred CCEEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEeecCCCeEEEEEEEECCCcEEEEEEEEE
Confidence 456777774 7789999999 799999864 57998743 2 59999887777788999885
No 23
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=95.81 E-value=0.017 Score=55.51 Aligned_cols=55 Identities=20% Similarity=0.377 Sum_probs=44.9
Q ss_pred CceeEEEEEcC----CCCeEEEEeecC---CCccc--e-eeee---eC-CcEEEEEEcCCc-eEEEEEEE
Q 028378 91 VGIPTMITWSH----DGCEVAVEGSWD---NWKTR--I-ALQR---SG-KDFTIMKVLPSG-VYQYRFLV 145 (210)
Q Consensus 91 ~~vpv~F~w~~----~g~~V~V~GSFd---nW~~~--i-pM~r---s~-~~f~i~l~Lp~G-~YqYKFiV 145 (210)
..++|+|+... .|+.|+|+||-. +|++. + +|.. .. ..|++++.||.| .++|||++
T Consensus 585 ~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~ 654 (686)
T 1d3c_A 585 DQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLK 654 (686)
T ss_dssp SEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCSSSSCTTCEEEEEEEETTCEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCeEEEEEEeCCCCcEEEEEEE
Confidence 56889998753 588999999876 89973 5 6776 33 489999999988 79999998
No 24
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=95.80 E-value=0.02 Score=55.05 Aligned_cols=56 Identities=23% Similarity=0.466 Sum_probs=45.1
Q ss_pred CCceeEEEEEcC-----CCCeEEEEeecC---CCcc--------ce-eeeeeC-CcEEEEEEcCCc-eEEEEEEE
Q 028378 90 GVGIPTMITWSH-----DGCEVAVEGSWD---NWKT--------RI-ALQRSG-KDFTIMKVLPSG-VYQYRFLV 145 (210)
Q Consensus 90 ~~~vpv~F~w~~-----~g~~V~V~GSFd---nW~~--------~i-pM~rs~-~~f~i~l~Lp~G-~YqYKFiV 145 (210)
...+.|+|+... .|++|+|+|+-. +|++ .+ +|.... ..|++++.||.| .++|||+|
T Consensus 579 ~~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~~~~~~W~~~v~l~~~~~~eyKy~~ 653 (686)
T 1qho_A 579 GTQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLAPNYPDWFYVFSVPAGKTIQFKFFI 653 (686)
T ss_dssp SSEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBCTTTTSEEEEEEEETTCEEEEEEEE
T ss_pred CCeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhcccccCCCCcEEEEEEeCCCCeEEEEEEE
Confidence 356788898763 478999999884 7987 45 777654 489999999988 59999998
No 25
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=95.60 E-value=0.028 Score=54.50 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=46.7
Q ss_pred eEEEE-EcCCCCeEEEEeecCCCcc-ceeeeeeC-CcEEEEEE-cCCceEEEEEEEc--Ce--eecCCCCCe
Q 028378 94 PTMIT-WSHDGCEVAVEGSWDNWKT-RIALQRSG-KDFTIMKV-LPSGVYQYRFLVD--GL--WKYAPDLPS 157 (210)
Q Consensus 94 pv~F~-w~~~g~~V~V~GSFdnW~~-~ipM~rs~-~~f~i~l~-Lp~G~YqYKFiVD--G~--W~~Dp~~P~ 157 (210)
-|+|+ |.+.+++|.|.+.+++|.. .++|++.. +.|.+.+. +.+| ..|+|.|+ |. .+.||....
T Consensus 114 ~~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~~~g~w~~~v~~~~~g-~~Y~f~v~~~g~~~~~~DPya~~ 184 (718)
T 2e8y_A 114 HTVFKVWAPAATSAAVKLSHPNKSGRTFQMTRLEKGVYAVTVTGDLHG-YEYLFCICNNSEWMETVDQYAKA 184 (718)
T ss_dssp EEEEEEECTTCSEEEEEEECTTSCCEEEECEECGGGEEEEEEESCCTT-CEEEEEEEETTEEEEECCTTCSS
T ss_pred cEEEEEECCCCCEEEEEEEcCCCcceEEeCccCCCCEEEEEECCCCCC-CeEEEEEEeCCeEEEecCCcccc
Confidence 47784 8899999999999988864 57999864 57999887 4566 35666664 76 456876653
No 26
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=95.24 E-value=0.037 Score=53.45 Aligned_cols=61 Identities=15% Similarity=0.046 Sum_probs=43.4
Q ss_pred EEEE-EcCCCCeEEEEeecCCCccc---eeeeeeCCcEEEEEE-cCCceEEEEEEEcC----------eeecCCCCC
Q 028378 95 TMIT-WSHDGCEVAVEGSWDNWKTR---IALQRSGKDFTIMKV-LPSGVYQYRFLVDG----------LWKYAPDLP 156 (210)
Q Consensus 95 v~F~-w~~~g~~V~V~GSFdnW~~~---ipM~rs~~~f~i~l~-Lp~G~YqYKFiVDG----------~W~~Dp~~P 156 (210)
|+|+ |.+.+++|.|.+-+++|... +.|.+.++.|++.+. +.+|. .|+|.|++ ....||...
T Consensus 138 ~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~~~~g~W~~~~~~~~~g~-~Y~y~v~~~~~~~~~~~~~~~~DPya~ 213 (884)
T 4aio_A 138 VSLHLWAPTAQGVSVCFFDGPAGPALETVQLKESNGVWSVTGPREWENR-YYLYEVDVYHPTKAQVLKCLAGDPYAR 213 (884)
T ss_dssp EEEEEECTTCSEEEEEEESTTTSCEEEEEECEEETTEEEEEEEGGGTTC-EEEEEEEEEETTTTEEEEEEECCTTCS
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCeeeeeeecCCCCEEEEEECCCCCCC-EEEEEEeCCCCCcccccCccccCCCee
Confidence 7885 99999999999965556543 244556789999886 56675 48888864 234677654
No 27
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=95.16 E-value=0.019 Score=54.11 Aligned_cols=56 Identities=18% Similarity=0.242 Sum_probs=42.9
Q ss_pred CceeEEE-EEcCCCCeEEE-EeecCCCcc---ceeeeeeC--C---cEEEEEEcCCceEEEEEEEc
Q 028378 91 VGIPTMI-TWSHDGCEVAV-EGSWDNWKT---RIALQRSG--K---DFTIMKVLPSGVYQYRFLVD 146 (210)
Q Consensus 91 ~~vpv~F-~w~~~g~~V~V-~GSFdnW~~---~ipM~rs~--~---~f~i~l~Lp~G~YqYKFiVD 146 (210)
..+.++| +|.+.+++|.| .|+|++|+. .++|+|.+ + .|++.+........|||.|.
T Consensus 21 ~~~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i~ 86 (583)
T 1ea9_C 21 TTVHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLATDELFDYWECEVTPPYRRVKYGFLLQ 86 (583)
T ss_dssp SCEECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEEECSSCEEECCEECCTTSCEEECBCCE
T ss_pred CEEEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEeccCCeEEEEEEEECCCceEEEEEEEE
Confidence 4456666 47788999999 799999964 57998742 2 49998887777788888874
No 28
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=95.03 E-value=0.054 Score=51.15 Aligned_cols=56 Identities=23% Similarity=0.344 Sum_probs=44.7
Q ss_pred CCceeEEEEEcC----CCCeEEEEeecC---CCccc---eeeee-eCC-cEEEEEEcCCc-eEEEEEEE
Q 028378 90 GVGIPTMITWSH----DGCEVAVEGSWD---NWKTR---IALQR-SGK-DFTIMKVLPSG-VYQYRFLV 145 (210)
Q Consensus 90 ~~~vpv~F~w~~----~g~~V~V~GSFd---nW~~~---ipM~r-s~~-~f~i~l~Lp~G-~YqYKFiV 145 (210)
.+.+.|+|+... .|++|+|+||-. +|+.. ++|.. ... .|++++.||.+ .++|||+|
T Consensus 417 ~~~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~~~p~~W~~~v~lp~~~~~eYKyv~ 485 (516)
T 1vem_A 417 VTPVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYDSHSNDWRGNVVLPAERNIEFKAFI 485 (516)
T ss_dssp CCEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEETTTTEEEEEEEEETTCCEEEEEEE
T ss_pred cCccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccCCCCCEEEEEEEECCCCcEEEEEEE
Confidence 456889998653 589999999874 79974 46766 344 89999999988 59999998
No 29
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=95.03 E-value=0.044 Score=56.14 Aligned_cols=63 Identities=16% Similarity=0.171 Sum_probs=47.5
Q ss_pred EEEE-EcCCCCeEEEEe-ecCCCcc-ceeeeee--CCcEEEEEE-cCCceEEEEEEEc------C----eeecCCCCCee
Q 028378 95 TMIT-WSHDGCEVAVEG-SWDNWKT-RIALQRS--GKDFTIMKV-LPSGVYQYRFLVD------G----LWKYAPDLPST 158 (210)
Q Consensus 95 v~F~-w~~~g~~V~V~G-SFdnW~~-~ipM~rs--~~~f~i~l~-Lp~G~YqYKFiVD------G----~W~~Dp~~P~~ 158 (210)
|+|+ |.+.+++|.|.+ ++++|.. +++|.+. .+.|.+.+. +.+|.+ |+|.|+ | ..+.||....+
T Consensus 306 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~~~~GvW~~~v~~~~~G~~-Y~y~v~~~~p~~g~~~~~~~~DPYa~~~ 384 (1083)
T 2fhf_A 306 VTFRVWAPTAQQVELVIYSADKKVIASHPMTRDSASGAWSWQGGSDLKGAF-YRYAMTVYHPQSRKVEQYEVTDPYAHSL 384 (1083)
T ss_dssp EEEEEECTTCSEEEEEEECTTCCEEEEEECEECTTTCEEEEEECGGGTTCE-EEEEEEEEETTTTEEEEEEECCTTCSCB
T ss_pred EEEEEECCCCCEEEEEEEcCCCCccceEECeECCCCCEEEEEECCCCCCCE-EEEEEEeecCCCCccccceecCCcccee
Confidence 6784 999999999999 8999975 5799863 468999875 677864 777774 4 34778866543
No 30
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=94.44 E-value=0.11 Score=50.42 Aligned_cols=63 Identities=21% Similarity=0.302 Sum_probs=46.5
Q ss_pred EEEE-EcCCCCeEEEEe-ecCCCcc---ceeeeee-CCcEEEEEEcC--Cc-----eEEEEEEEc--Ce--eecCCCCCe
Q 028378 95 TMIT-WSHDGCEVAVEG-SWDNWKT---RIALQRS-GKDFTIMKVLP--SG-----VYQYRFLVD--GL--WKYAPDLPS 157 (210)
Q Consensus 95 v~F~-w~~~g~~V~V~G-SFdnW~~---~ipM~rs-~~~f~i~l~Lp--~G-----~YqYKFiVD--G~--W~~Dp~~P~ 157 (210)
|.|+ |.+.+++|.|.+ ++++|.. +++|.+. ++.|.+.+.-. +| -+.|+|.|+ |. .+.||....
T Consensus 26 v~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~~~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~~~~~~~~DPya~~ 105 (714)
T 2ya0_A 26 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKGERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYAKS 105 (714)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEECGGGEEEEEECTTCSSSCSCCTTCEEEEEEEETTEEEEECCTTCSE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCccceEEeCccCCCCEEEEEECCccCCCccccCCcEEEEEEEeCCceEEecCCceee
Confidence 6784 999999999999 8888863 5899875 35899987631 34 267888886 54 467886654
No 31
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=94.39 E-value=0.044 Score=54.93 Aligned_cols=63 Identities=17% Similarity=0.173 Sum_probs=47.7
Q ss_pred EEEE-EcCCCCeEEEEe-ecCCCcc---ceeeeee-CCcEEEEEEcCCce-----EEEEEEEc--Ce--eecCCCCCe
Q 028378 95 TMIT-WSHDGCEVAVEG-SWDNWKT---RIALQRS-GKDFTIMKVLPSGV-----YQYRFLVD--GL--WKYAPDLPS 157 (210)
Q Consensus 95 v~F~-w~~~g~~V~V~G-SFdnW~~---~ipM~rs-~~~f~i~l~Lp~G~-----YqYKFiVD--G~--W~~Dp~~P~ 157 (210)
|.|+ |.+.|++|.|.+ ++++|.. +++|.+. ++.|.+.+.+.+|. +.|+|.|+ |. .+.||..-.
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~~~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~~~~~DPYA~~ 223 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKNNKGVWQTILDTKLGIKNYTGYYYLYEIKRGKDKVKILDPYAKS 223 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEECTTSEEEEEECGGGTCSCCTTCEEEEEEEETTEEEEECCTTCSC
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeeccccCCCCEEEEEECCCCCCccCCCeEEEEEEeeCCceeEecCcccee
Confidence 6885 899999999998 7888853 5899885 46899998766662 67888886 33 567887653
No 32
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=94.37 E-value=0.15 Score=48.82 Aligned_cols=60 Identities=20% Similarity=0.336 Sum_probs=45.6
Q ss_pred EEE-EEcCCCCeEEEEeecCCCccceeeeeeC-CcEEEEEE-cCCceEEEEEEEc-CeeecCCCCCeee
Q 028378 95 TMI-TWSHDGCEVAVEGSWDNWKTRIALQRSG-KDFTIMKV-LPSGVYQYRFLVD-GLWKYAPDLPSTQ 159 (210)
Q Consensus 95 v~F-~w~~~g~~V~V~GSFdnW~~~ipM~rs~-~~f~i~l~-Lp~G~YqYKFiVD-G~W~~Dp~~P~~~ 159 (210)
|+| .|.+.+++|.|++ +|. .++|+|.+ +.|.+.+. +.+|. .|||.|+ |..+.||......
T Consensus 44 ~~F~vwap~a~~v~l~~---~~~-~~~m~~~~~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~~~ 107 (618)
T 3m07_A 44 VRFRLWATGQQKVMLRL---AGK-DQEMQANGDGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRAQK 107 (618)
T ss_dssp EEEEEECTTCSCEEEEE---TTE-EEECEECSTTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSCBS
T ss_pred EEEEEECCCCCEEEEEE---CCC-cccCeecCCEEEEEEeCCCCCCC-EEEEEEeCCeEeccccceeee
Confidence 678 4899999999998 354 48999865 46888774 67775 5889995 5688899776543
No 33
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=94.31 E-value=0.09 Score=52.70 Aligned_cols=62 Identities=16% Similarity=0.260 Sum_probs=45.0
Q ss_pred eEEE-EEcCCCCeEEEEeecCCCc----cceeeeeeC-CcEEEEEE-cCCceEEEEEEE--cCe--eecCCCCCe
Q 028378 94 PTMI-TWSHDGCEVAVEGSWDNWK----TRIALQRSG-KDFTIMKV-LPSGVYQYRFLV--DGL--WKYAPDLPS 157 (210)
Q Consensus 94 pv~F-~w~~~g~~V~V~GSFdnW~----~~ipM~rs~-~~f~i~l~-Lp~G~YqYKFiV--DG~--W~~Dp~~P~ 157 (210)
-|+| .|.+.+++|.|.. |++|. .+++|++.. +.|.+.+. +.+|. .|+|.| +|. .+.||....
T Consensus 326 gv~F~vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~~~gvW~~~v~~~~~g~-~Y~y~v~~~g~~~~~~DPya~~ 398 (921)
T 2wan_A 326 ATSFRVWAPTASNVQLLL-YNSEKGSITKQLEMQKSDNGTWKLQVSGNLENW-YYLYQVTVNGTTQTAVDPYARA 398 (921)
T ss_dssp EEEEEEECTTCSEEEEEE-ESSSSSCCSEEEECEECGGGEEEEEEESCCTTC-EEEEEEECSSCEEEECCTTCSS
T ss_pred eEEEEEECCCCCEEEEEE-EeCCCCCcCeEEeCeeCCCCEEEEEEccCCCCC-EEEEEEEeCCeEEEecCCccee
Confidence 3677 4889999999997 99994 358999864 57999886 45664 366666 565 456776553
No 34
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=93.74 E-value=0.052 Score=51.63 Aligned_cols=53 Identities=9% Similarity=0.139 Sum_probs=39.8
Q ss_pred eEEEE-E----cCCCCeEEEEeecCCCc-cceeeee--eC-----CcEEEEEEcCCceEEEEEEEcC
Q 028378 94 PTMIT-W----SHDGCEVAVEGSWDNWK-TRIALQR--SG-----KDFTIMKVLPSGVYQYRFLVDG 147 (210)
Q Consensus 94 pv~F~-w----~~~g~~V~V~GSFdnW~-~~ipM~r--s~-----~~f~i~l~Lp~G~YqYKFiVDG 147 (210)
-|+|+ | .+.+++|.|.+.|++ . .+++|++ .. +.|++.+........|+|.|+|
T Consensus 31 ~v~f~v~~~~~ap~a~~V~l~~~~~~-~~~~~~m~~~~~~~~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 31 SVTLKLRTFKGDITSANIKYWDTADN-AFHWVPMVWDSNDPTGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CEEEEEEEETTCCSEEEEEEEETTTT-EEEEEECEEEEECTTSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred EEEEEEEEecCcCCeeEEEEEEecCC-CEEEEEeEEeeccccCCeeEEEEEEECCCceEEEEEEEEE
Confidence 46774 7 567899999999864 3 2589988 32 4699988876667789999974
No 35
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=93.33 E-value=0.015 Score=54.14 Aligned_cols=56 Identities=20% Similarity=0.335 Sum_probs=0.0
Q ss_pred CCceeEEEEE-c---CCCCeEEEEeecC---CCcc--ceeee-e-eCCcEEEEEEcCCc-eEEEEEEE
Q 028378 90 GVGIPTMITW-S---HDGCEVAVEGSWD---NWKT--RIALQ-R-SGKDFTIMKVLPSG-VYQYRFLV 145 (210)
Q Consensus 90 ~~~vpv~F~w-~---~~g~~V~V~GSFd---nW~~--~ipM~-r-s~~~f~i~l~Lp~G-~YqYKFiV 145 (210)
...+.|+|+. . ..|++|+|+||-. +|++ .++|. . ....|++++.||.| .++|||+|
T Consensus 428 ~~~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~~~~~~W~~~v~lp~~~~~eyKy~~ 495 (527)
T 1gcy_A 428 GALVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDTSGYPTWKGSIALPAGQNEEWKCLI 495 (527)
T ss_dssp --------------------------------------------------------------------
T ss_pred CCEEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccCCCCCeEEEEEEeCCCCcEEEEEEE
Confidence 3457888886 3 3589999999885 7997 46887 3 34589999999988 69999997
No 36
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=92.20 E-value=0.33 Score=48.67 Aligned_cols=60 Identities=25% Similarity=0.549 Sum_probs=45.0
Q ss_pred CceeEEEEEcCCCCeEEEEeec-------CCCccc---eeeee-eCCcEEEEEEcCCceEEEEEEEcCeee
Q 028378 91 VGIPTMITWSHDGCEVAVEGSW-------DNWKTR---IALQR-SGKDFTIMKVLPSGVYQYRFLVDGLWK 150 (210)
Q Consensus 91 ~~vpv~F~w~~~g~~V~V~GSF-------dnW~~~---ipM~r-s~~~f~i~l~Lp~G~YqYKFiVDG~W~ 150 (210)
.+++|..--......+.|.|+| .+|++. .-|++ .++.|+.+..||+|.|+||+.++|.|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~w~p~~~~~~~~~~~~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 151 EKIPVTSAVSANPVTAVLVGDLQQALGAANNWSPDDDHTLLKKINPNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp CEECEEEEEECCCCCEEEEETTSGGGTCSSSSCTTCGGGBCEEEETTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred ccccccccccccccccccccchhhhccccccCCCCCCcceeeccCCcceeeeeccCCcceeEEEeecCccc
Confidence 3567766666666778888866 568863 24554 356899888999999999999998774
No 37
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=91.93 E-value=0.28 Score=49.78 Aligned_cols=62 Identities=19% Similarity=0.295 Sum_probs=45.0
Q ss_pred EEEE-EcCCCCeEEEEe-ecCCCcc---ceeeeee-CCcEEEEEEcC--Cc-----eEEEEEEEc--Ce--eecCCCCC
Q 028378 95 TMIT-WSHDGCEVAVEG-SWDNWKT---RIALQRS-GKDFTIMKVLP--SG-----VYQYRFLVD--GL--WKYAPDLP 156 (210)
Q Consensus 95 v~F~-w~~~g~~V~V~G-SFdnW~~---~ipM~rs-~~~f~i~l~Lp--~G-----~YqYKFiVD--G~--W~~Dp~~P 156 (210)
|.|+ |.+.+++|.|++ ++++|.. +++|.+. ++.|.+.+... +| -+.|+|.|+ |. ...||...
T Consensus 333 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~~~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~~~~~~~~DPYa~ 411 (1014)
T 2ya1_A 333 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKGERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYAK 411 (1014)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEECGGGEEEEEECTTCSSCCSCCTTCEEEEEEEETTEEEEECCTTCS
T ss_pred EEEEEECCCCCEEEEEEEECCCCCccceEEecccCCCCEEEEEEcccccCCccccCCcEEEEEEEeCCeEEEecCccce
Confidence 6784 899999999999 8888863 5899874 35899987632 23 256777775 54 56788654
No 38
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=88.22 E-value=1.6 Score=32.90 Aligned_cols=63 Identities=16% Similarity=0.280 Sum_probs=42.0
Q ss_pred ceeEEEEEcCCCCeEEEEeecC--CCcc--ceeeeee-CCc-EEEEEEcCCc-eEEEEEEEcC--eeecCCCC
Q 028378 92 GIPTMITWSHDGCEVAVEGSWD--NWKT--RIALQRS-GKD-FTIMKVLPSG-VYQYRFLVDG--LWKYAPDL 155 (210)
Q Consensus 92 ~vpv~F~w~~~g~~V~V~GSFd--nW~~--~ipM~rs-~~~-f~i~l~Lp~G-~YqYKFiVDG--~W~~Dp~~ 155 (210)
.--+++.+..+.++|+|==.+. +|+. .++|.+. ... |.++|.|+.+ .++|+| -|| .|-.....
T Consensus 9 g~~vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~~~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN~g~ 80 (102)
T 2c3v_A 9 ATDITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKSEXEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNNQGR 80 (102)
T ss_dssp CCSEEEEEECCCSSCEEEEEETTCCBCCTTCEECEECSSTTEEEEEECCCTTCEEEEEE-ECSSSCEECGGGT
T ss_pred CCEEEEEEcCCCCcEEEEEeCCCCCcccCCCcCccccccCCceEEEEecCCCceEEEEE-eCCCcccccCCCc
Confidence 4455666667778887764453 4775 4799985 344 5799999965 888988 454 48654433
No 39
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=82.05 E-value=1.7 Score=35.94 Aligned_cols=47 Identities=11% Similarity=0.007 Sum_probs=36.4
Q ss_pred CCeEEEEeecCCCc--cceeeeeeC---CcEEEEEEcCCceEEEEEEEcCeee
Q 028378 103 GCEVAVEGSWDNWK--TRIALQRSG---KDFTIMKVLPSGVYQYRFLVDGLWK 150 (210)
Q Consensus 103 g~~V~V~GSFdnW~--~~ipM~rs~---~~f~i~l~Lp~G~YqYKFiVDG~W~ 150 (210)
.++++|+|++.+|. ...+|.+.. +.|..++.|+.|. +|||.-+..|-
T Consensus 12 p~~lY~vG~~~gW~~~~~~~m~~~~~~~g~y~~~~yl~ag~-~fKf~~~~~~~ 63 (221)
T 4fch_A 12 PKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANS-EFKFGTKENEY 63 (221)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECTTCTTEEEEEEEECTTE-EEEEESSTTCC
T ss_pred cceEEEEecCCCCCCCccceeeeccCCCceEEEEEEEcCCC-eEEEeeccCcc
Confidence 46899999999886 346787753 4799999998774 89999876553
No 40
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=76.55 E-value=8.2 Score=29.33 Aligned_cols=58 Identities=19% Similarity=0.465 Sum_probs=40.7
Q ss_pred ceeEEEEEcCCC---CeEEEEe-ecCCCccceeeeeeCCcEEEEE-EcCCceEEEEEEE-cCeeecC
Q 028378 92 GIPTMITWSHDG---CEVAVEG-SWDNWKTRIALQRSGKDFTIMK-VLPSGVYQYRFLV-DGLWKYA 152 (210)
Q Consensus 92 ~vpv~F~w~~~g---~~V~V~G-SFdnW~~~ipM~rs~~~f~i~l-~Lp~G~YqYKFiV-DG~W~~D 152 (210)
-.-|+|+.-.++ ..|.|.+ +=.+|. +|.|++..|++.- ....|-+.||+.. ||+|++.
T Consensus 27 ~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~---~M~rnGa~W~~~s~~~L~GplSfRvtts~G~~~va 90 (108)
T 2jnz_A 27 KLVLDIKYTRPGDSLAEVELRQHGSEEWE---PLTKKGNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 90 (108)
T ss_dssp EEEEEEEEEBTTBCEEEEEEECTTCCCCE---ECEEETTEEEEECSSCCCSSEEEEEEETTTEEEEE
T ss_pred EEEEEEEEeCCCCCEEEEEEEeCCCCcEe---EccccCCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 345666666443 5789996 777895 6999955799764 1345789999988 5877654
No 41
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.50 E-value=12 Score=30.15 Aligned_cols=58 Identities=17% Similarity=0.271 Sum_probs=41.3
Q ss_pred CceeEEEEEc--CCCCeEEEEeecCCCccc--eeeeee--------CCcEEEEEEcCC-----c--eEEEEEEEcCe
Q 028378 91 VGIPTMITWS--HDGCEVAVEGSWDNWKTR--IALQRS--------GKDFTIMKVLPS-----G--VYQYRFLVDGL 148 (210)
Q Consensus 91 ~~vpv~F~w~--~~g~~V~V~GSFdnW~~~--ipM~rs--------~~~f~i~l~Lp~-----G--~YqYKFiVDG~ 148 (210)
..+.-++.-. .-.|+|.|.=+||+|+.. +++... -+.|...|.||+ + .+-.||.|+|+
T Consensus 46 ~~l~GtV~V~NlafeK~V~VR~T~D~Wkt~~dv~a~y~~~~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~ 122 (156)
T 2eef_A 46 KAIAGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQYVKDTYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQ 122 (156)
T ss_dssp TEEEEEEEECCSSSCCEEEEEEESSTTSSEEEEECEECCCSSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTE
T ss_pred CEEEEEEEEeccCCCcEEEEEEeECCCcccEEEEEEEccccCCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCC
Confidence 3566666665 367999999999999974 344432 125888888885 3 46678888887
No 42
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=66.36 E-value=23 Score=26.56 Aligned_cols=57 Identities=16% Similarity=0.155 Sum_probs=37.9
Q ss_pred ceeEEEEEcC--CCCeEEEEee--cCCCcc-cee--ee--ee---C--CcEEEEEEcCCc-eEEEEEEEcCe
Q 028378 92 GIPTMITWSH--DGCEVAVEGS--WDNWKT-RIA--LQ--RS---G--KDFTIMKVLPSG-VYQYRFLVDGL 148 (210)
Q Consensus 92 ~vpv~F~w~~--~g~~V~V~GS--FdnW~~-~ip--M~--rs---~--~~f~i~l~Lp~G-~YqYKFiVDG~ 148 (210)
.+.-+++-.. -.|.|.|.=+ ||+|+. ... .. ++ + ..|...|.||.. .+--||.|+|+
T Consensus 20 ~l~GtV~V~NlafeK~V~VR~T~~~D~W~t~~~dv~a~y~~~~~~~~~D~F~F~i~l~~~~eFcIrY~v~g~ 91 (106)
T 2djm_A 20 TFSGKIYVKNIAYSKKVTVVYADGSDNWNNNGNIIAASFSGPISGSNYEYWTFSASVKGIKEFYIKYEVSGK 91 (106)
T ss_dssp CEEEEEEECCSSSCEEEEEEEEETTSSCSSCCCEEECEEEEECTTSSCEEEEEEECCSSEEEEEEEEEESSC
T ss_pred EEEEEEEEeecCcCcEEEEEECCCcCCCccccEEEEEEEecCCCCCCeEEEEEEEECCCCeEEEEEEEECCc
Confidence 4555555553 4577888777 999998 432 21 11 2 259999999855 56678889987
No 43
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=60.49 E-value=7.9 Score=30.41 Aligned_cols=25 Identities=24% Similarity=0.582 Sum_probs=20.4
Q ss_pred EEEcCCc-eEEEEEEEcCeeecCCCCC
Q 028378 131 MKVLPSG-VYQYRFLVDGLWKYAPDLP 156 (210)
Q Consensus 131 ~l~Lp~G-~YqYKFiVDG~W~~Dp~~P 156 (210)
.+.|..| +|.|+| ++|+|+.+.+..
T Consensus 99 svtl~rG~t~~F~y-~~g~Wv~~gd~~ 124 (126)
T 4dny_A 99 KVTLSVGNTLLFKY-VNGQWFRSGELE 124 (126)
T ss_dssp EEEECTTCEEEEEE-ETTEEEETTCC-
T ss_pred EEEecCCCEEEEEE-cCCEEEEccccc
Confidence 4577888 899999 999999987753
No 44
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=59.33 E-value=14 Score=33.42 Aligned_cols=42 Identities=7% Similarity=0.290 Sum_probs=31.6
Q ss_pred CeEEEEeecCCCccc--eeeeeeC---CcEEEEEEcCCceEEEEEEEc
Q 028378 104 CEVAVEGSWDNWKTR--IALQRSG---KDFTIMKVLPSGVYQYRFLVD 146 (210)
Q Consensus 104 ~~V~V~GSFdnW~~~--ipM~rs~---~~f~i~l~Lp~G~YqYKFiVD 146 (210)
...+|+|++++|... .+|.+.. +.|++...|..+. +|||+..
T Consensus 151 ~~~YlvG~~~gW~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~fK~~~~ 197 (470)
T 4fe9_A 151 DGYYIVGDFTGWDGNSAQQMKKDALDENLYILEAEIESTS-NFKIFPA 197 (470)
T ss_dssp TCEEEEETTTCSSGGGCEECEECSSCTTEEEEEEEESSCC-EEEEEEG
T ss_pred ceeEEEcccCCCCcccCeeeeeecCCCceEEEEEEeccCc-eEEEeec
Confidence 468999999999853 5676642 3688888887665 7999864
No 45
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=55.96 E-value=41 Score=24.93 Aligned_cols=58 Identities=19% Similarity=0.449 Sum_probs=40.5
Q ss_pred ceeEEEEEcCCC---CeEEEEeecC-CCccceeeeeeCCcEEEEEE-cCCceEEEEEEE-cCeeecC
Q 028378 92 GIPTMITWSHDG---CEVAVEGSWD-NWKTRIALQRSGKDFTIMKV-LPSGVYQYRFLV-DGLWKYA 152 (210)
Q Consensus 92 ~vpv~F~w~~~g---~~V~V~GSFd-nW~~~ipM~rs~~~f~i~l~-Lp~G~YqYKFiV-DG~W~~D 152 (210)
-.-|.|+.-.++ ..|.|.|+=. +|. +|.|-+..|++.-. ...|-+.||+.. ||++++.
T Consensus 16 ~l~vlv~nv~G~gdI~~V~ik~s~t~~W~---~M~rwGa~W~~~s~~~l~GplSfRvt~~~G~~~v~ 79 (100)
T 3ft1_A 16 KLVLDIKYTRPGDSLAEVELRQHGSEEWE---PLTKKGNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 79 (100)
T ss_dssp EEEEEEEEECTTCCEEEEEEECTTCCCCE---ECEEETTEEEEECSSCCCSSEEEEEEETTCCEEEE
T ss_pred eEEEEEEEcCCCccEEEEEEEeCCCCCeE---EecccCCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 345677766543 4688999876 795 69995558988642 445788888887 6776654
No 46
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=49.04 E-value=16 Score=26.02 Aligned_cols=27 Identities=33% Similarity=0.550 Sum_probs=18.0
Q ss_pred eecCCCccceeeeeeCCcEEEEEEcCCc
Q 028378 110 GSWDNWKTRIALQRSGKDFTIMKVLPSG 137 (210)
Q Consensus 110 GSFdnW~~~ipM~rs~~~f~i~l~Lp~G 137 (210)
|||.+|+. -.|+.+++.-++.+.+|.|
T Consensus 1 ~~~s~W~q-P~lk~~g~~KsL~Lf~P~g 27 (75)
T 2fqm_A 1 GSHMDWKQ-PELESDEHGKTLRLTLPEG 27 (75)
T ss_dssp ----CCCC-CEEEEETTEEEEEEECCSS
T ss_pred CCcccccC-ceeecCCCCceEEEeCCCC
Confidence 79999986 4577777777888888877
No 47
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=46.07 E-value=33 Score=32.23 Aligned_cols=48 Identities=10% Similarity=0.165 Sum_probs=33.8
Q ss_pred eeEEEE-EcCCCCeEEEEeecCCCccceeeeeeC--C---cEEEEEEcCCceEEEEEEE
Q 028378 93 IPTMIT-WSHDGCEVAVEGSWDNWKTRIALQRSG--K---DFTIMKVLPSGVYQYRFLV 145 (210)
Q Consensus 93 vpv~F~-w~~~g~~V~V~GSFdnW~~~ipM~rs~--~---~f~i~l~Lp~G~YqYKFiV 145 (210)
+-++|+ .....++|.+.++ .+++|+|.. + .|.+.+.......+|+|.|
T Consensus 125 ~~~r~~~~~~~~~~~~~~~~-----~~~~m~~~~~~~~~d~w~~~v~~~~~~~~Y~f~i 178 (645)
T 4aef_A 125 VHVLLRTQKGVIKGATFLGE-----KHVPMRKKASDELFDYFEVIVEGGDKRLNYSFEV 178 (645)
T ss_dssp EEEEEEEETTTEEEEEEESS-----SEEECEEEEECSSEEEEEEEEECSCSCEEEEEEE
T ss_pred EEEEEEcccCCcceEEEeCC-----CEEEEEEEecCCCeEEEEEEEECCCCceEEEEEE
Confidence 445553 2345678888754 468998853 3 3888888888888999988
No 48
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=37.79 E-value=24 Score=26.01 Aligned_cols=18 Identities=22% Similarity=0.359 Sum_probs=15.0
Q ss_pred EEEEEcCCceEEEEEEEc
Q 028378 129 TIMKVLPSGVYQYRFLVD 146 (210)
Q Consensus 129 ~i~l~Lp~G~YqYKFiVD 146 (210)
.+.+.|+.|.+.-||..+
T Consensus 97 ~~~v~L~aG~ntI~l~~~ 114 (127)
T 2vzp_A 97 TVRVTLAAGVNKIKAVAT 114 (127)
T ss_dssp EEEEEECSEEEEEEEEEC
T ss_pred EEEEEECCCceEEEEEEe
Confidence 356889999999999875
No 49
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=36.74 E-value=22 Score=26.97 Aligned_cols=19 Identities=21% Similarity=0.071 Sum_probs=15.3
Q ss_pred EEEEEcCCceEEEEEEEcC
Q 028378 129 TIMKVLPSGVYQYRFLVDG 147 (210)
Q Consensus 129 ~i~l~Lp~G~YqYKFiVDG 147 (210)
.+.+.|++|.+..||..++
T Consensus 98 ~~~v~L~aG~ntI~l~~~~ 116 (144)
T 2w47_A 98 GIVANLNQGNNVIRATAIA 116 (144)
T ss_dssp EEEEEECSEEEEEEEEECS
T ss_pred EEEEEECCCccEEEEEEeC
Confidence 3568899999999998754
No 50
>2bem_A CBP21; chitin-binding protein, chitin degradation, chitin-binding, FNIII-like fold; 1.55A {Serratia marcescens} SCOP: b.1.18.2 PDB: 2lhs_A 2ben_A
Probab=33.08 E-value=1.4e+02 Score=23.90 Aligned_cols=68 Identities=19% Similarity=0.399 Sum_probs=38.8
Q ss_pred eEEEEEcCCCC------eEEEEeecCCCccceeeeee-----------------CCcEEEEEEcCCceEEEEEEEcCeee
Q 028378 94 PTMITWSHDGC------EVAVEGSWDNWKTRIALQRS-----------------GKDFTIMKVLPSGVYQYRFLVDGLWK 150 (210)
Q Consensus 94 pv~F~w~~~g~------~V~V~GSFdnW~~~ipM~rs-----------------~~~f~i~l~Lp~G~YqYKFiVDG~W~ 150 (210)
.++|+|...+. +++|+- .+|++..+|.++ ++.++..+.||.|+--| ++|=..|.
T Consensus 76 ~~~f~w~~TA~H~t~~~~~YITK--~gwdp~~pLtw~dlel~pf~~~~~~~~~p~~~~~~~~~lP~~rsG~-hVI~~vWq 152 (170)
T 2bem_A 76 PNSFTWKLTARHSTTSWRYFITK--PNWDASQPLTRASFDLTPFCQFNDGGAIPAAQVTHQCNIPADRSGS-HVILAVWD 152 (170)
T ss_dssp EEEEEEEESSCCCEEEEEEEEEC--TTCCTTSCCCGGGEEEEEEEEEECTTCCCCSEEEEEEEECTTCCEE-EEEEEEEE
T ss_pred cEEEEEEeecccCCceEEEEECC--CCCCCCCCccHHHccccceeecCCCCcCCCceEEEEEEcCCCCccC-EEEEEEEE
Confidence 67899985332 578864 445544444331 12467777888754433 55556787
Q ss_pred cCCCCCeeeCCCCCeeEEEEc
Q 028378 151 YAPDLPSTQDDDGNVYNILDL 171 (210)
Q Consensus 151 ~Dp~~P~~~D~~G~~NNvI~V 171 (210)
..... -...|.++|
T Consensus 153 ~~Dt~-------eaFY~c~DV 166 (170)
T 2bem_A 153 IADTA-------NAFYQAIDV 166 (170)
T ss_dssp ESSSS-------EEEEEEEEE
T ss_pred eccCC-------CCCEEEEEE
Confidence 76411 135666666
No 51
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=32.89 E-value=42 Score=30.23 Aligned_cols=50 Identities=24% Similarity=0.228 Sum_probs=33.7
Q ss_pred CCeEEEEeecCCCcc-------ceeeeee---CCcEEEEEEcCCceEEEEEEEcCeeecCC
Q 028378 103 GCEVAVEGSWDNWKT-------RIALQRS---GKDFTIMKVLPSGVYQYRFLVDGLWKYAP 153 (210)
Q Consensus 103 g~~V~V~GSFdnW~~-------~ipM~rs---~~~f~i~l~Lp~G~YqYKFiVDG~W~~Dp 153 (210)
..+++|+|++.+|.- ..+|... .+.|..++.|..+ -+|||.-++.|-.+-
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-gefKF~~~~~W~~~~ 319 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPVNGTKGTFWGIFYFAAN-DQVKFAPQANWGNDF 319 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEECTTCTTEEEEEEEECTT-CEEEEESSSSSSSCB
T ss_pred cceEEEEeecccCCCCCCCcccccccccccCcCceEEEEEEECCC-ceEEEEecCCccccc
Confidence 467999999988742 1345443 2467777766544 588999998886543
No 52
>1uy4_A Endo-1,4-beta-xylanase A; carbohydrate-binding module, thermodynamics, protein structure, protein-carbohydrate interactions; HET: XYP; 1.69A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1uy1_A* 1uy3_A* 1uy2_A*
Probab=32.73 E-value=26 Score=27.01 Aligned_cols=19 Identities=16% Similarity=0.100 Sum_probs=14.1
Q ss_pred EEEEcCCceEEEEEEEcCe
Q 028378 130 IMKVLPSGVYQYRFLVDGL 148 (210)
Q Consensus 130 i~l~Lp~G~YqYKFiVDG~ 148 (210)
+.+.++.|+|..+|...|.
T Consensus 115 ~~v~~~~G~h~lyl~f~g~ 133 (145)
T 1uy4_A 115 TNISKITGVHDIVLVFSGP 133 (145)
T ss_dssp EEEEEECSEEEEEEEESSC
T ss_pred EEecCCCceEEEEEEEeCC
Confidence 3456678888888888774
No 53
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=32.04 E-value=26 Score=30.89 Aligned_cols=24 Identities=21% Similarity=0.546 Sum_probs=19.7
Q ss_pred CCceEEEEEEEcCeee---cCCCCCee
Q 028378 135 PSGVYQYRFLVDGLWK---YAPDLPST 158 (210)
Q Consensus 135 p~G~YqYKFiVDG~W~---~Dp~~P~~ 158 (210)
+.|+|++||..+|+|+ +|...|+.
T Consensus 120 ~~G~y~vr~~~~G~W~~VvVDD~LP~~ 146 (339)
T 2r9f_A 120 YAGIFHFQLWQFGEWVDVVVDDLLPTK 146 (339)
T ss_dssp CCSEEEEEEEETTEEEEEEEESCEEEE
T ss_pred CCceEEEEEeeCCEEEEEEEcCCCccc
Confidence 4699999999999997 56777754
No 54
>1uxx_X Xylanase U; carbohydrate binding module, CBM6, xylopentaose binding, xylan degradation; HET: XYP; 1.6A {Clostridium thermocellum} SCOP: b.18.1.10 PDB: 1gmm_A*
Probab=30.33 E-value=17 Score=27.42 Aligned_cols=20 Identities=10% Similarity=0.037 Sum_probs=15.1
Q ss_pred EEEEcCCceEEEEEEEcCee
Q 028378 130 IMKVLPSGVYQYRFLVDGLW 149 (210)
Q Consensus 130 i~l~Lp~G~YqYKFiVDG~W 149 (210)
+.+.++.|+|..+|...|.+
T Consensus 100 ~~v~~~~G~h~l~l~f~G~~ 119 (133)
T 1uxx_X 100 CSITNTTGQHDLYLVFSGPV 119 (133)
T ss_dssp EEEEEECSEEEEEEEESSCC
T ss_pred EEEccCCcEEEEEEEEECCc
Confidence 34566889999999888753
No 55
>4a02_A EFCBM33A, CBM33, chitin binding protein; chitin degradation, chitin oxidation; 0.95A {Enterococcus faecalis} SCOP: b.1.18.0
Probab=29.66 E-value=1.6e+02 Score=23.70 Aligned_cols=68 Identities=16% Similarity=0.363 Sum_probs=39.4
Q ss_pred eEEEEEcCCCC------eEEEEeecCCCccceeeeee---------------CCcEEEEEEcCCceEEEEEEEcCeeecC
Q 028378 94 PTMITWSHDGC------EVAVEGSWDNWKTRIALQRS---------------GKDFTIMKVLPSGVYQYRFLVDGLWKYA 152 (210)
Q Consensus 94 pv~F~w~~~g~------~V~V~GSFdnW~~~ipM~rs---------------~~~f~i~l~Lp~G~YqYKFiVDG~W~~D 152 (210)
.++|+|...+. +++|+ =.+|++..+|.++ ++.++..+.||.++-- +++|=..|...
T Consensus 75 ~~~f~w~~TA~H~t~~~~~YIT--K~gwdp~~pLtw~dle~~~~~~~~~~~p~~~y~~~v~lP~~rsG-~hVI~~vWq~~ 151 (166)
T 4a02_A 75 PLDITWNLTAQHRTASWDYYIT--KNGWNPNQPLDIKNFDKIASIDGKQEVPNKVVKQTINIPTDRKG-YHVIYAVWGIG 151 (166)
T ss_dssp EEEEEEEESSCCCEEEEEEEEE--CTTCCTTSCCCGGGEEEEEEEEEEEECCCSEEEEEEEECTTCCE-EEEEEEEEEES
T ss_pred ceEEEEeeecccCCCeEEEEEc--CCCCCCCCCccHHHCeeeeeecCCCcCCCCeEEEEEEeCCCCcc-CEEEEEEEEec
Confidence 47899985432 57786 4566665555442 2346777777755322 23555778776
Q ss_pred CCCCeeeCCCCCeeEEEEc
Q 028378 153 PDLPSTQDDDGNVYNILDL 171 (210)
Q Consensus 153 p~~P~~~D~~G~~NNvI~V 171 (210)
... ....|.++|
T Consensus 152 Dt~-------eaFY~csDV 163 (166)
T 4a02_A 152 DTV-------NAFYQAIDV 163 (166)
T ss_dssp SSS-------EEEEEEEEE
T ss_pred CCC-------CCCEEEEEE
Confidence 431 125577666
No 56
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=29.61 E-value=25 Score=28.72 Aligned_cols=46 Identities=22% Similarity=0.309 Sum_probs=32.2
Q ss_pred CeEEEEeec--CCCccc--eeeee---eCCcEEEEEEcCCceEEEEEEEcCee
Q 028378 104 CEVAVEGSW--DNWKTR--IALQR---SGKDFTIMKVLPSGVYQYRFLVDGLW 149 (210)
Q Consensus 104 ~~V~V~GSF--dnW~~~--ipM~r---s~~~f~i~l~Lp~G~YqYKFiVDG~W 149 (210)
.+|+|+|+- ++|... .+|+. .++.|.....|..|..+++|.++..|
T Consensus 117 ~~v~liG~at~~gW~~~~~~~~t~~~t~~g~~~~~~~l~~Ge~k~~~~~~~DW 169 (221)
T 4fch_A 117 AEVYLFGNTTGGSWAFNDEWKFTVPATKDGNFVSPAMTASGEVRMCFKTDLDW 169 (221)
T ss_dssp CCEEEEBGGGTSBCSCBGGGBCBCCSSTTCCEECCCCCSCEECEEEECCSSCG
T ss_pred ceEEEEEeecCCCCCCCcccceeeccCCCceEEeEEEecCCcEEEEEcCCCCc
Confidence 469999984 678753 45654 23468777889999888877665444
No 57
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=29.16 E-value=37 Score=25.97 Aligned_cols=29 Identities=17% Similarity=0.570 Sum_probs=20.8
Q ss_pred EeecCCCccceeeeeeCCcEEEEEEcCCceEEEEEEEcC
Q 028378 109 EGSWDNWKTRIALQRSGKDFTIMKVLPSGVYQYRFLVDG 147 (210)
Q Consensus 109 ~GSFdnW~~~ipM~rs~~~f~i~l~Lp~G~YqYKFiVDG 147 (210)
+|+|+.|.. .++.+.|+.|.+..||..++
T Consensus 86 Tg~W~~w~t----------~~~~v~L~aG~ntI~l~~~~ 114 (145)
T 2w3j_A 86 NSNWTQWQT----------VNVDIPLKAGTNSIKLVAET 114 (145)
T ss_dssp CSCTTSCEE----------EEEEEEECSEEEEEEEEECS
T ss_pred CCCCCeeEE----------EEEEEEECCCceEEEEEEec
Confidence 456666643 23578899999999998754
No 58
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=27.59 E-value=27 Score=30.58 Aligned_cols=24 Identities=25% Similarity=0.696 Sum_probs=19.8
Q ss_pred CCceEEEEEEEcCeee---cCCCCCee
Q 028378 135 PSGVYQYRFLVDGLWK---YAPDLPST 158 (210)
Q Consensus 135 p~G~YqYKFiVDG~W~---~Dp~~P~~ 158 (210)
+.|+|++||..+|+|+ +|...|+.
T Consensus 115 ~~G~y~vr~~~~G~w~~VvVDD~lP~~ 141 (326)
T 2nqa_A 115 YAGIFHFQFWQYGEWVEVVIDDRLPTK 141 (326)
T ss_dssp CSSEEEEEEECSSSEEEEEEECCEEEE
T ss_pred CCceEEEEEEECCEEEEEEEeCcCccc
Confidence 4699999999999997 57777754
No 59
>1uxz_A Cellulase B; carbohydrate binding module, CBM6, mixted BETA1, 3-1, 4 linked glucan; 1.4A {Cellvibrio mixtus} SCOP: b.18.1.10 PDB: 1uy0_A* 1uyx_A* 1uyy_A* 1uyz_A* 1uz0_A*
Probab=27.51 E-value=18 Score=27.24 Aligned_cols=17 Identities=18% Similarity=0.202 Sum_probs=13.8
Q ss_pred EEEEcCCceEEEEEEEc
Q 028378 130 IMKVLPSGVYQYRFLVD 146 (210)
Q Consensus 130 i~l~Lp~G~YqYKFiVD 146 (210)
..+.|+.|+|..+|...
T Consensus 100 ~~v~l~~G~h~l~l~~~ 116 (131)
T 1uxz_A 100 HTVNLSAGSHQFGIKAN 116 (131)
T ss_dssp EEEEECSEEECEEEEEE
T ss_pred EEEEeCCCeEEEEEEEc
Confidence 45778999999888876
No 60
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=26.90 E-value=89 Score=29.72 Aligned_cols=52 Identities=10% Similarity=0.087 Sum_probs=32.3
Q ss_pred ceeEEEEEcCCCCeEEEEeecCCCccceeeeeeCC---cEEEEEEcCCceEEEEEEEc
Q 028378 92 GIPTMITWSHDGCEVAVEGSWDNWKTRIALQRSGK---DFTIMKVLPSGVYQYRFLVD 146 (210)
Q Consensus 92 ~vpv~F~w~~~g~~V~V~GSFdnW~~~ipM~rs~~---~f~i~l~Lp~G~YqYKFiVD 146 (210)
.+.++|+-.....+|.|...-..|. ..|.+..+ .|++++. ....++|+|+|+
T Consensus 133 ~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~Y~f~~~ 187 (696)
T 4aee_A 133 EIIIRLIAPTEINEPLIDLGNEIRE--PLTKHVVGDNIVYQYIIP-SRSILRYRFIFN 187 (696)
T ss_dssp EEEEEEEEETTSCCCEEECSSCEEC--CSEEEEETTEEEEEEEEE-CCSEEEEEEEEE
T ss_pred EEEEEEEEcCCCCEEEEEcCCccee--eeeeeecCCceEEEEEEc-CCCeEEEEEEEE
Confidence 4566664334666677754433343 23444332 5888888 777899999995
No 61
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=26.72 E-value=39 Score=25.60 Aligned_cols=29 Identities=28% Similarity=0.460 Sum_probs=21.3
Q ss_pred EeecCCCccceeeeeeCCcEEEEEEcCCceEEEEEEEcC
Q 028378 109 EGSWDNWKTRIALQRSGKDFTIMKVLPSGVYQYRFLVDG 147 (210)
Q Consensus 109 ~GSFdnW~~~ipM~rs~~~f~i~l~Lp~G~YqYKFiVDG 147 (210)
+|+|+.|.. .++.+.|+.|.+..||.-++
T Consensus 88 Tg~W~~w~t----------~~~~v~L~aG~ntI~l~~~~ 116 (139)
T 2w87_A 88 TGAWTTWQT----------ATIDVDLVQGNNIVQLSATT 116 (139)
T ss_dssp CSSTTCCEE----------EEEEEEECSEEEEEEEEESS
T ss_pred CCCCCccEE----------EEEEEEECCCceEEEEEEcC
Confidence 466777753 23578899999999998764
No 62
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=26.68 E-value=78 Score=27.39 Aligned_cols=47 Identities=11% Similarity=0.030 Sum_probs=34.0
Q ss_pred CCeEEEEeecCCCc--cceeeeee---CCcEEEEEEcCCceEEEEEEEcCeee
Q 028378 103 GCEVAVEGSWDNWK--TRIALQRS---GKDFTIMKVLPSGVYQYRFLVDGLWK 150 (210)
Q Consensus 103 g~~V~V~GSFdnW~--~~ipM~rs---~~~f~i~l~Lp~G~YqYKFiVDG~W~ 150 (210)
...++|+|+..+|. ...+|... .+.|...+.|..| ..|||+-+..|-
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~~~~g~y~~~~yl~~~-~~fKf~~~~~~~ 200 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDAN-SEFKFGTKENEY 200 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECTTSTTEEEEEEEECTT-EEEEEESSTTCC
T ss_pred cceEEEeccccCCCCcccceeeeccCCCceEEEEEEecCC-ceEEeccccCCc
Confidence 47899999997654 34567654 3578888888766 579998875554
No 63
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=26.56 E-value=29 Score=30.60 Aligned_cols=24 Identities=21% Similarity=0.617 Sum_probs=19.6
Q ss_pred CCceEEEEEEEcCeee---cCCCCCee
Q 028378 135 PSGVYQYRFLVDGLWK---YAPDLPST 158 (210)
Q Consensus 135 p~G~YqYKFiVDG~W~---~Dp~~P~~ 158 (210)
+.|+|++||..+|+|+ +|..+|+.
T Consensus 119 ~~G~y~~r~~~~G~W~~VvVDD~LP~~ 145 (339)
T 1ziv_A 119 YAGIFHFQFWQHSEWLDVVIDDRLPTF 145 (339)
T ss_dssp CCSEEEEEEECSSSEEEEEEECCEEES
T ss_pred cceEEEEEEeeCCEEEEEEEcCCCccC
Confidence 5799999999999997 56667753
No 64
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=25.98 E-value=1.1e+02 Score=22.76 Aligned_cols=36 Identities=14% Similarity=0.237 Sum_probs=22.3
Q ss_pred eeeeeeCCcEEEEEEcCCceEEEEEEEcCeeecCCCC
Q 028378 119 IALQRSGKDFTIMKVLPSGVYQYRFLVDGLWKYAPDL 155 (210)
Q Consensus 119 ipM~rs~~~f~i~l~Lp~G~YqYKFiVDG~W~~Dp~~ 155 (210)
+-..|+.-.-+|-+-=|.|-|+|+|. +|.|++.-+.
T Consensus 49 ~VINkQ~P~~QIWlaSp~sG~hfd~~-~~~Wi~~r~g 84 (106)
T 1ew4_A 49 IIINRQEPLHQVWLATKQGGYHFDLK-GDEWICDRSG 84 (106)
T ss_dssp EEEEEETTTTEEEEECSSCEEEEEEE-TTEEEETTTC
T ss_pred EEEeCCchhhhheEecCCCceeeeec-CCEEEECCCC
Confidence 44556543334444445444999985 8999987654
No 65
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=25.03 E-value=1.4e+02 Score=19.74 Aligned_cols=16 Identities=19% Similarity=0.073 Sum_probs=7.3
Q ss_pred eEEEEEcC-CCCeEEEE
Q 028378 94 PTMITWSH-DGCEVAVE 109 (210)
Q Consensus 94 pv~F~w~~-~g~~V~V~ 109 (210)
+|+|++.. ...+|.+.
T Consensus 28 ~V~~~n~~~~~H~v~~~ 44 (91)
T 1bxv_A 28 TVQWVNNKLAPHNVVVE 44 (91)
T ss_dssp EEEEEECSSCCEEEEET
T ss_pred EEEEEECCCCCcEEEEe
Confidence 45555443 23445443
No 66
>1od3_A Putative xylanase; hydrolase, carbohydrate binding module, beta-sandwich, laminaribiose; HET: BGC; 1.0A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1nae_A* 1o8s_A* 1o8p_A
Probab=24.94 E-value=42 Score=26.59 Aligned_cols=19 Identities=16% Similarity=0.151 Sum_probs=13.9
Q ss_pred EEEEcCCceEEEEEEEcCe
Q 028378 130 IMKVLPSGVYQYRFLVDGL 148 (210)
Q Consensus 130 i~l~Lp~G~YqYKFiVDG~ 148 (210)
+.+.++.|+|..+|...|.
T Consensus 137 ~~v~~~~G~hdLylvf~G~ 155 (168)
T 1od3_A 137 ATISNTAGVKDIVLVFSGP 155 (168)
T ss_dssp EEEEEECSEEEEEEEESSC
T ss_pred EEEcCCCcEEEEEEEEECC
Confidence 3456678888888887774
No 67
>3fil_A Immunoglobulin G-binding protein G; dimerization, beta sheet, alpha helix, improved hydrophobic packing of core residues, protein binding; HET: FME; 0.88A {Streptococcus SP} SCOP: d.15.7.1 PDB: 2qmt_A 2jsv_X 2ju6_X 2k0p_A 2kq4_X 2kwd_A 2lgi_A 2gi9_A 1gb1_A 1pga_A 1pgb_A 2gb1_A 3gb1_A 2klk_A 2rmm_A 2onq_A 2on8_A 2j52_A 2j53_A 3v3x_A* ...
Probab=23.78 E-value=17 Score=24.51 Aligned_cols=12 Identities=42% Similarity=0.855 Sum_probs=9.3
Q ss_pred EcCeeecCCCCC
Q 028378 145 VDGLWKYAPDLP 156 (210)
Q Consensus 145 VDG~W~~Dp~~P 156 (210)
|||+|.+|+.-.
T Consensus 39 vdgeW~YD~ATk 50 (56)
T 3fil_A 39 VDGEWTYDDATK 50 (56)
T ss_dssp CCCEEEEEGGGT
T ss_pred CccEEEecCcee
Confidence 689999988554
No 68
>1w9s_A BH0236 protein, BHCBM6; carbohydrate-binding module, lectin, beta-glucan, carbohydrate binding, glycoside hydrolase; 1.59A {Bacillus halodurans} SCOP: b.18.1.10 PDB: 1w9t_A* 1w9w_A*
Probab=23.40 E-value=29 Score=26.34 Aligned_cols=19 Identities=16% Similarity=0.254 Sum_probs=14.6
Q ss_pred EEEEcCCceEEEEEEEcCe
Q 028378 130 IMKVLPSGVYQYRFLVDGL 148 (210)
Q Consensus 130 i~l~Lp~G~YqYKFiVDG~ 148 (210)
+.+.++.|+|..+|...|.
T Consensus 107 ~~v~~~~G~h~l~l~f~g~ 125 (142)
T 1w9s_A 107 GNVQIQPGTYDVYLVFKGS 125 (142)
T ss_dssp EEEEECSEEEEEEEEEESC
T ss_pred EEEccCCcEEEEEEEEECC
Confidence 3466789999999888763
No 69
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=23.18 E-value=29 Score=23.86 Aligned_cols=12 Identities=42% Similarity=0.858 Sum_probs=10.1
Q ss_pred EcCeeecCCCCC
Q 028378 145 VDGLWKYAPDLP 156 (210)
Q Consensus 145 VDG~W~~Dp~~P 156 (210)
|||+|.+|+...
T Consensus 48 vdgeWsYD~ATk 59 (65)
T 1mhx_A 48 VDGEWTYDDAAK 59 (65)
T ss_dssp CCSEEEEETTTT
T ss_pred CccEEEecCcee
Confidence 689999998765
No 70
>1igd_A Protein G; immunoglobulin binding protein; 1.10A {Streptococcus SP} SCOP: d.15.7.1 PDB: 1igc_A 2igd_A 2igh_A 1qkz_A 2igg_A 1uwx_A 3mp9_A
Probab=23.14 E-value=22 Score=24.47 Aligned_cols=12 Identities=42% Similarity=0.983 Sum_probs=9.8
Q ss_pred EcCeeecCCCCC
Q 028378 145 VDGLWKYAPDLP 156 (210)
Q Consensus 145 VDG~W~~Dp~~P 156 (210)
|||+|.+|+.-.
T Consensus 44 vdgew~yd~atk 55 (61)
T 1igd_A 44 VDGVWTYDDATK 55 (61)
T ss_dssp CCCEEEEETTTT
T ss_pred CCceEeecCcee
Confidence 589999998655
No 71
>1xbr_A Protein (T protein); complex (transcription factor/DNA), transcription factor, DNA-binding protein, transcription/DNA complex; HET: DNA; 2.50A {Xenopus laevis} SCOP: b.2.5.4
Probab=22.68 E-value=39 Score=27.62 Aligned_cols=26 Identities=15% Similarity=0.432 Sum_probs=20.1
Q ss_pred cEEEEEEcC-CceEEEEEEEcCeeecCC
Q 028378 127 DFTIMKVLP-SGVYQYRFLVDGLWKYAP 153 (210)
Q Consensus 127 ~f~i~l~Lp-~G~YqYKFiVDG~W~~Dp 153 (210)
.|.+.+++. ...++||| ++|+|....
T Consensus 47 ~Y~v~l~~~~~D~~ryk~-~~~~W~~~g 73 (184)
T 1xbr_A 47 MYTVLLDFVAADNHRWKY-VNGEWVPGG 73 (184)
T ss_dssp EEEEEEEEEESSSCEEEE-ETTEEEEES
T ss_pred CeEEEEEEEEccCceEEE-ECCcEEEcC
Confidence 577777764 45899999 799998753
No 72
>1edn_A Endothelin-1; signal polypeptide G-protein coupled-receptor ligand, vasoconstrictor; 2.18A {Homo sapiens} SCOP: j.28.1.1 PDB: 1v6r_A 6cmh_A*
Probab=21.71 E-value=15 Score=21.27 Aligned_cols=17 Identities=47% Similarity=1.167 Sum_probs=14.4
Q ss_pred CcCcccccceeeeeeec
Q 028378 191 TCHSLLGFECSYWCYLN 207 (210)
Q Consensus 191 tp~s~~~~~~~~~~~~~ 207 (210)
+++|+.-=+|-|.|.|.
T Consensus 2 sC~s~~DkEC~YfChld 18 (26)
T 1edn_A 2 SCSSLMDKECVYFCHLD 18 (26)
T ss_dssp CCCSSSGGGSTTTSTTT
T ss_pred cccccccccEEEEEecc
Confidence 67888899999999774
No 73
>3mep_A Uncharacterized protein ECA2234; all beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Pectobacterium atrosepticum}
Probab=21.11 E-value=1.3e+02 Score=24.10 Aligned_cols=58 Identities=21% Similarity=0.367 Sum_probs=30.2
Q ss_pred eeEEEEEcCCCCeEE--EEeecCCCccceeeeeeCCcEEEEEEcCCceEEEEEEEcCe-eec
Q 028378 93 IPTMITWSHDGCEVA--VEGSWDNWKTRIALQRSGKDFTIMKVLPSGVYQYRFLVDGL-WKY 151 (210)
Q Consensus 93 vpv~F~w~~~g~~V~--V~GSFdnW~~~ipM~rs~~~f~i~l~Lp~G~YqYKFiVDG~-W~~ 151 (210)
+.+-|++..+...+. ++-.+.+|.. .++....+...+.+....+.|+|.|-.||+ |+.
T Consensus 83 ~k~gie~~~g~~~l~~V~t~g~sd~~~-~~~~~~~~~v~LRv~~~~~~~~~~yS~DG~~w~~ 143 (198)
T 3mep_A 83 IKAGIEFNDGQPSIGCVVTNNNSDWST-GLFPGNPGDFWMRVTSKSDVIRIQYSIDGKNWPL 143 (198)
T ss_dssp EEEEEEECSSSEEEEEEEEESSEEEEE-EECCSCTTSEEEEEEEETTEEEEEEESSSSCCCE
T ss_pred EEEEEEEeCCeEEEEEEEcCCcccccc-ccccCCCCeEEEEEEEECCEEEEEEECCCCEEEE
Confidence 445566654433332 2222444532 333322344445555556788888888987 764
No 74
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=21.07 E-value=1.7e+02 Score=19.85 Aligned_cols=14 Identities=36% Similarity=0.598 Sum_probs=6.6
Q ss_pred cEEEEEEcCCceEEE
Q 028378 127 DFTIMKVLPSGVYQY 141 (210)
Q Consensus 127 ~f~i~l~Lp~G~YqY 141 (210)
.+++++ ..+|.|.|
T Consensus 68 ~~~~tf-~~~G~y~~ 81 (98)
T 1pcs_A 68 SFTSTF-TEPGTYTY 81 (98)
T ss_dssp EEEEEC-CSCEEEEE
T ss_pred EEEEEc-CCCeEEEE
Confidence 444444 24555544
No 75
>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A
Probab=21.05 E-value=90 Score=25.59 Aligned_cols=43 Identities=14% Similarity=0.247 Sum_probs=29.1
Q ss_pred CeEEEEeecCCCccceeeeeeCCcEEEEEEcCCceEEEEEEE-cCeee
Q 028378 104 CEVAVEGSWDNWKTRIALQRSGKDFTIMKVLPSGVYQYRFLV-DGLWK 150 (210)
Q Consensus 104 ~~V~V~GSFdnW~~~ipM~rs~~~f~i~l~Lp~G~YqYKFiV-DG~W~ 150 (210)
++|.|.++ .+|. +|.|+...|...-.|..+-+.+|.-. ||+++
T Consensus 139 ~~v~i~~~-~~W~---~m~r~~~n~~~~~~~~~~pls~rvT~~~G~~v 182 (208)
T 3d30_A 139 MKMEYEKD-GKWI---NMEKMDYNHFVSTNLGTGSLKVRMTDIRGKVV 182 (208)
T ss_dssp EEEEEEET-TEEE---EEEECTTSCEEEECCCSSSEEEEEEETTCCEE
T ss_pred EEEEEecC-CcEE---EccccccceeecCCCCCCCEEEEEEECCCCEE
Confidence 57888887 5674 69887654444445666677777764 68766
No 76
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=20.71 E-value=1.5e+02 Score=21.81 Aligned_cols=19 Identities=11% Similarity=0.162 Sum_probs=12.0
Q ss_pred ceeEEEEEcCC----CCeEEEEe
Q 028378 92 GIPTMITWSHD----GCEVAVEG 110 (210)
Q Consensus 92 ~vpv~F~w~~~----g~~V~V~G 110 (210)
+-.|+|+|... ..++.|.+
T Consensus 42 G~~V~~~~~N~~~~~~H~~~i~~ 64 (139)
T 2aan_A 42 GQTVTIRFKNNSAVQQHNWILVK 64 (139)
T ss_dssp TCEEEEEEECCCSSCCBCCEEES
T ss_pred CCEEEEEEEeCCCCCCeeEEEec
Confidence 44677888742 56666665
Done!