Query 028385
Match_columns 210
No_of_seqs 228 out of 2250
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 17:39:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028385.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028385hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pxx_A Uncharacterized protein 99.9 8.3E-21 2.8E-25 145.0 16.7 131 7-138 42-180 (215)
2 1pjz_A Thiopurine S-methyltran 99.9 1.8E-21 6.2E-26 148.5 10.2 104 7-117 22-140 (203)
3 4hg2_A Methyltransferase type 99.8 1.6E-21 5.6E-26 153.9 8.8 100 8-121 40-139 (257)
4 4gek_A TRNA (CMO5U34)-methyltr 99.8 1.2E-20 3.9E-25 149.4 13.0 106 7-120 70-181 (261)
5 2gb4_A Thiopurine S-methyltran 99.8 1.1E-20 3.9E-25 148.7 11.4 104 7-117 68-191 (252)
6 1vl5_A Unknown conserved prote 99.8 6E-20 2.1E-24 144.7 11.1 104 7-119 37-142 (260)
7 3g5l_A Putative S-adenosylmeth 99.8 1.3E-19 4.3E-24 142.3 12.2 103 7-118 44-146 (253)
8 3h2b_A SAM-dependent methyltra 99.8 9.3E-20 3.2E-24 138.4 10.9 103 8-120 42-144 (203)
9 3dh0_A SAM dependent methyltra 99.8 4.2E-19 1.4E-23 136.2 14.6 106 7-120 37-146 (219)
10 3ujc_A Phosphoethanolamine N-m 99.8 2E-19 6.7E-24 141.8 12.4 108 6-119 54-161 (266)
11 3dtn_A Putative methyltransfer 99.8 3.5E-19 1.2E-23 138.1 13.5 109 6-121 43-152 (234)
12 1xtp_A LMAJ004091AAA; SGPP, st 99.8 2.2E-19 7.7E-24 140.7 11.6 107 6-118 92-198 (254)
13 2p7i_A Hypothetical protein; p 99.8 2.7E-19 9.1E-24 139.4 10.9 102 7-120 42-144 (250)
14 1xxl_A YCGJ protein; structura 99.8 3.5E-19 1.2E-23 138.9 11.4 106 6-120 20-127 (239)
15 3hnr_A Probable methyltransfer 99.8 7.3E-19 2.5E-23 135.0 12.3 103 7-119 45-147 (220)
16 3kkz_A Uncharacterized protein 99.8 6.7E-19 2.3E-23 139.3 12.2 104 6-118 45-151 (267)
17 3l8d_A Methyltransferase; stru 99.8 4.8E-19 1.6E-23 137.8 11.1 104 7-120 53-156 (242)
18 3ofk_A Nodulation protein S; N 99.8 3.3E-19 1.1E-23 136.6 10.0 107 6-119 50-156 (216)
19 3dlc_A Putative S-adenosyl-L-m 99.8 4E-19 1.4E-23 135.9 10.3 104 10-121 46-152 (219)
20 2yqz_A Hypothetical protein TT 99.8 6.5E-19 2.2E-23 138.6 11.4 103 5-116 37-140 (263)
21 3jwh_A HEN1; methyltransferase 99.8 1.7E-18 5.7E-23 132.9 13.4 105 7-117 29-141 (217)
22 1nkv_A Hypothetical protein YJ 99.8 4.5E-19 1.5E-23 139.2 9.9 104 6-118 35-141 (256)
23 2p8j_A S-adenosylmethionine-de 99.8 6.3E-19 2.2E-23 134.2 10.2 109 7-122 23-133 (209)
24 3bus_A REBM, methyltransferase 99.8 6.6E-19 2.2E-23 139.6 10.7 106 6-119 60-168 (273)
25 4htf_A S-adenosylmethionine-de 99.8 6.2E-19 2.1E-23 140.8 10.4 104 8-119 69-175 (285)
26 3bkw_A MLL3908 protein, S-aden 99.8 1.3E-18 4.4E-23 135.4 12.0 103 7-118 43-145 (243)
27 3i9f_A Putative type 11 methyl 99.8 4E-18 1.4E-22 125.8 13.9 99 7-120 17-115 (170)
28 3jwg_A HEN1, methyltransferase 99.8 1.6E-18 5.4E-23 133.2 12.0 105 7-117 29-141 (219)
29 3f4k_A Putative methyltransfer 99.8 1.1E-18 3.8E-23 137.0 11.3 104 6-118 45-151 (257)
30 2xvm_A Tellurite resistance pr 99.8 2.6E-18 8.8E-23 129.7 12.7 105 7-119 32-138 (199)
31 3ou2_A SAM-dependent methyltra 99.8 2.3E-18 7.9E-23 131.7 12.5 107 7-123 46-152 (218)
32 3ege_A Putative methyltransfer 99.8 4.9E-19 1.7E-23 139.8 8.7 101 6-120 33-133 (261)
33 2ex4_A Adrenal gland protein A 99.8 1.1E-18 3.8E-23 136.0 10.6 107 7-119 79-187 (241)
34 3cgg_A SAM-dependent methyltra 99.8 1.6E-17 5.5E-22 124.6 16.3 104 7-120 46-150 (195)
35 2o57_A Putative sarcosine dime 99.8 8.4E-19 2.9E-23 140.7 9.8 105 6-119 81-189 (297)
36 2gs9_A Hypothetical protein TT 99.8 1.4E-18 4.8E-23 132.6 10.5 101 7-121 36-136 (211)
37 3dli_A Methyltransferase; PSI- 99.8 1.4E-18 4.9E-23 135.4 10.5 101 7-120 41-143 (240)
38 3sm3_A SAM-dependent methyltra 99.8 3.2E-18 1.1E-22 132.3 12.1 108 7-120 30-144 (235)
39 3ccf_A Cyclopropane-fatty-acyl 99.8 2.5E-18 8.5E-23 136.9 11.7 101 7-120 57-157 (279)
40 3lcc_A Putative methyl chlorid 99.8 1.3E-18 4.4E-23 135.2 9.4 104 9-120 68-174 (235)
41 2a14_A Indolethylamine N-methy 99.8 8.3E-19 2.8E-23 138.8 8.0 111 5-119 53-199 (263)
42 3g5t_A Trans-aconitate 3-methy 99.8 1.6E-18 5.6E-23 139.3 9.9 105 7-120 36-152 (299)
43 3pfg_A N-methyltransferase; N, 99.8 3.2E-18 1.1E-22 135.1 11.2 105 8-122 51-156 (263)
44 3gu3_A Methyltransferase; alph 99.8 3.1E-18 1.1E-22 136.8 11.1 105 6-119 21-128 (284)
45 3vc1_A Geranyl diphosphate 2-C 99.8 3.5E-18 1.2E-22 138.3 11.4 104 6-119 116-223 (312)
46 2vdw_A Vaccinia virus capping 99.8 1.2E-18 4E-23 140.6 8.4 108 8-119 49-171 (302)
47 1zx0_A Guanidinoacetate N-meth 99.8 9.2E-19 3.2E-23 136.2 7.4 109 7-119 60-172 (236)
48 2p35_A Trans-aconitate 2-methy 99.8 7.1E-18 2.4E-22 132.5 12.5 102 6-119 32-134 (259)
49 4fsd_A Arsenic methyltransfera 99.8 1.8E-18 6.3E-23 143.8 9.7 105 7-119 83-205 (383)
50 1ri5_A MRNA capping enzyme; me 99.8 5.4E-18 1.9E-22 135.7 12.0 109 7-119 64-176 (298)
51 3e23_A Uncharacterized protein 99.8 6E-18 2E-22 129.2 11.6 101 7-119 43-143 (211)
52 3mgg_A Methyltransferase; NYSG 99.8 3.2E-18 1.1E-22 135.9 10.5 105 6-118 36-143 (276)
53 1ve3_A Hypothetical protein PH 99.8 6.1E-18 2.1E-22 130.3 11.7 104 8-120 39-145 (227)
54 3m70_A Tellurite resistance pr 99.8 5.9E-18 2E-22 135.2 11.9 104 7-118 120-224 (286)
55 3ggd_A SAM-dependent methyltra 99.8 4.3E-18 1.5E-22 132.9 10.2 109 6-122 55-168 (245)
56 3g2m_A PCZA361.24; SAM-depende 99.7 8.1E-18 2.8E-22 135.3 11.9 106 9-122 84-195 (299)
57 3orh_A Guanidinoacetate N-meth 99.7 1.7E-18 5.9E-23 134.9 7.1 103 8-117 61-170 (236)
58 3g07_A 7SK snRNA methylphospha 99.7 1.2E-17 4E-22 134.1 11.5 110 7-117 46-220 (292)
59 3mti_A RRNA methylase; SAM-dep 99.7 1.4E-17 4.8E-22 124.6 10.9 112 7-119 22-137 (185)
60 2i62_A Nicotinamide N-methyltr 99.7 5E-18 1.7E-22 133.7 8.6 111 6-119 55-200 (265)
61 2kw5_A SLR1183 protein; struct 99.7 1.4E-17 4.8E-22 126.2 10.4 102 10-120 32-134 (202)
62 1kpg_A CFA synthase;, cyclopro 99.7 3.1E-17 1.1E-21 131.0 12.2 104 7-120 64-171 (287)
63 3hem_A Cyclopropane-fatty-acyl 99.7 2.1E-17 7E-22 133.1 11.1 112 6-122 71-188 (302)
64 2aot_A HMT, histamine N-methyl 99.7 8.2E-18 2.8E-22 134.9 8.3 107 7-120 52-175 (292)
65 1y8c_A S-adenosylmethionine-de 99.7 2.1E-17 7.3E-22 128.5 10.4 105 7-118 37-143 (246)
66 3ocj_A Putative exported prote 99.7 9.7E-18 3.3E-22 135.3 8.5 109 7-121 118-231 (305)
67 3iv6_A Putative Zn-dependent a 99.7 6.2E-17 2.1E-21 127.6 12.9 101 6-117 44-148 (261)
68 3thr_A Glycine N-methyltransfe 99.7 7.3E-18 2.5E-22 134.9 7.5 112 7-119 57-177 (293)
69 3p9n_A Possible methyltransfer 99.7 5E-17 1.7E-21 122.2 11.7 107 7-119 44-155 (189)
70 2g72_A Phenylethanolamine N-me 99.7 1.3E-17 4.3E-22 133.5 8.6 108 7-117 71-215 (289)
71 2fk8_A Methoxy mycolic acid sy 99.7 7.9E-17 2.7E-21 130.5 13.3 106 7-122 90-199 (318)
72 3bxo_A N,N-dimethyltransferase 99.7 5.1E-17 1.7E-21 126.0 11.0 105 7-121 40-145 (239)
73 2avn_A Ubiquinone/menaquinone 99.7 5.7E-17 2E-21 127.8 11.3 102 7-120 54-155 (260)
74 3lpm_A Putative methyltransfer 99.7 3.3E-16 1.1E-20 123.5 15.5 112 7-118 49-177 (259)
75 2qe6_A Uncharacterized protein 99.7 1.3E-16 4.5E-21 127.0 12.5 109 7-120 77-199 (274)
76 3bgv_A MRNA CAP guanine-N7 met 99.7 9.5E-17 3.3E-21 129.9 11.9 111 7-120 34-158 (313)
77 1wzn_A SAM-dependent methyltra 99.7 1.2E-16 4.1E-21 125.1 12.0 103 7-117 41-145 (252)
78 1vlm_A SAM-dependent methyltra 99.7 8.2E-17 2.8E-21 123.7 10.4 95 8-120 48-142 (219)
79 3e8s_A Putative SAM dependent 99.7 3.6E-17 1.2E-21 125.6 8.3 100 8-120 53-155 (227)
80 1nt2_A Fibrillarin-like PRE-rR 99.7 1.2E-16 4.1E-21 122.4 10.7 100 7-117 57-161 (210)
81 3d2l_A SAM-dependent methyltra 99.7 1.5E-16 5.2E-21 123.6 11.5 102 8-117 34-137 (243)
82 3cc8_A Putative methyltransfer 99.7 9.7E-17 3.3E-21 123.4 10.2 99 7-119 32-132 (230)
83 3dp7_A SAM-dependent methyltra 99.7 3.6E-16 1.2E-20 129.1 14.1 106 7-120 179-290 (363)
84 1dus_A MJ0882; hypothetical pr 99.7 2.8E-16 9.7E-21 117.6 11.9 105 7-120 52-160 (194)
85 3e05_A Precorrin-6Y C5,15-meth 99.7 1.2E-15 4.1E-20 115.9 15.6 102 7-119 40-144 (204)
86 3dmg_A Probable ribosomal RNA 99.7 2.1E-16 7.2E-21 131.1 11.9 109 7-119 233-342 (381)
87 3htx_A HEN1; HEN1, small RNA m 99.7 2.9E-16 9.9E-21 138.9 13.2 106 7-119 721-836 (950)
88 3eey_A Putative rRNA methylase 99.7 9.1E-17 3.1E-21 121.3 8.8 112 8-119 23-141 (197)
89 3evz_A Methyltransferase; NYSG 99.7 3.1E-16 1.1E-20 121.1 11.7 114 7-120 55-182 (230)
90 1af7_A Chemotaxis receptor met 99.7 2.4E-16 8.3E-21 125.1 11.1 103 8-116 106-251 (274)
91 2fca_A TRNA (guanine-N(7)-)-me 99.7 1E-15 3.4E-20 117.4 14.1 112 8-119 39-155 (213)
92 1xdz_A Methyltransferase GIDB; 99.7 3.9E-16 1.3E-20 121.7 11.7 100 7-118 70-175 (240)
93 2ift_A Putative methylase HI07 99.7 1.4E-16 5E-21 121.0 9.0 105 8-120 54-166 (201)
94 3bkx_A SAM-dependent methyltra 99.7 1.3E-16 4.4E-21 126.4 9.0 106 7-120 43-162 (275)
95 2fyt_A Protein arginine N-meth 99.7 2.2E-16 7.6E-21 129.3 10.6 99 7-114 64-168 (340)
96 3fpf_A Mtnas, putative unchara 99.7 1.1E-15 3.9E-20 121.8 14.1 100 6-118 121-223 (298)
97 3dxy_A TRNA (guanine-N(7)-)-me 99.7 1.1E-16 3.9E-21 123.2 8.0 107 8-119 35-152 (218)
98 3q7e_A Protein arginine N-meth 99.7 2.2E-16 7.6E-21 129.7 10.2 102 8-115 67-171 (349)
99 3grz_A L11 mtase, ribosomal pr 99.7 1.7E-16 5.8E-21 120.6 8.9 100 7-119 60-161 (205)
100 1fbn_A MJ fibrillarin homologu 99.7 3.6E-16 1.2E-20 121.1 10.7 100 6-116 73-177 (230)
101 3i53_A O-methyltransferase; CO 99.7 6.8E-16 2.3E-20 125.9 12.5 107 7-122 169-279 (332)
102 2ozv_A Hypothetical protein AT 99.7 4.5E-15 1.6E-19 117.1 16.9 111 6-117 35-170 (260)
103 2zfu_A Nucleomethylin, cerebra 99.7 5.2E-16 1.8E-20 118.7 11.1 88 7-120 67-154 (215)
104 4e2x_A TCAB9; kijanose, tetron 99.7 2.4E-17 8E-22 138.4 3.1 103 7-118 107-209 (416)
105 2esr_A Methyltransferase; stru 99.7 2.8E-16 9.6E-21 116.6 8.5 105 7-120 31-141 (177)
106 1vbf_A 231AA long hypothetical 99.7 4.7E-16 1.6E-20 120.2 9.9 99 7-120 70-168 (231)
107 4df3_A Fibrillarin-like rRNA/T 99.7 1.4E-15 4.8E-20 117.7 12.4 104 5-117 75-182 (233)
108 1yzh_A TRNA (guanine-N(7)-)-me 99.6 1.4E-15 4.7E-20 116.5 12.2 111 8-118 42-157 (214)
109 1jsx_A Glucose-inhibited divis 99.6 3.7E-15 1.3E-19 113.2 14.2 102 8-122 66-170 (207)
110 3uwp_A Histone-lysine N-methyl 99.6 2.6E-16 9E-21 130.2 8.1 108 6-122 172-293 (438)
111 3lbf_A Protein-L-isoaspartate 99.6 3.7E-16 1.3E-20 119.1 8.4 99 6-119 76-176 (210)
112 2r3s_A Uncharacterized protein 99.6 7.9E-16 2.7E-20 125.3 10.7 108 6-121 164-275 (335)
113 3m33_A Uncharacterized protein 99.6 5.2E-16 1.8E-20 119.9 9.1 91 7-115 48-140 (226)
114 4azs_A Methyltransferase WBDD; 99.6 2.2E-16 7.6E-21 137.5 7.7 106 7-120 66-176 (569)
115 2fpo_A Methylase YHHF; structu 99.6 4.6E-16 1.6E-20 118.3 8.5 102 8-118 55-161 (202)
116 1yb2_A Hypothetical protein TA 99.6 3.5E-15 1.2E-19 118.6 13.9 100 6-119 109-213 (275)
117 3njr_A Precorrin-6Y methylase; 99.6 2.2E-15 7.7E-20 114.7 12.0 99 7-119 55-156 (204)
118 3gwz_A MMCR; methyltransferase 99.6 2.5E-15 8.6E-20 124.3 13.2 107 6-121 201-311 (369)
119 3hm2_A Precorrin-6Y C5,15-meth 99.6 1.3E-15 4.3E-20 112.9 10.0 101 7-120 25-130 (178)
120 3ckk_A TRNA (guanine-N(7)-)-me 99.6 1.3E-15 4.3E-20 118.6 10.3 112 8-119 47-170 (235)
121 3fzg_A 16S rRNA methylase; met 99.6 2.2E-16 7.5E-21 117.7 5.2 99 8-117 50-152 (200)
122 3mcz_A O-methyltransferase; ad 99.6 1.2E-15 4E-20 125.3 10.0 108 8-121 180-291 (352)
123 2ipx_A RRNA 2'-O-methyltransfe 99.6 1.3E-15 4.6E-20 118.0 9.7 101 7-117 77-182 (233)
124 3r0q_C Probable protein argini 99.6 1.1E-15 3.9E-20 126.7 9.6 105 6-117 62-169 (376)
125 1x19_A CRTF-related protein; m 99.6 3.7E-15 1.3E-19 122.8 12.6 107 6-121 189-299 (359)
126 4dcm_A Ribosomal RNA large sub 99.6 1.8E-15 6.2E-20 125.3 10.5 108 8-119 223-336 (375)
127 3g89_A Ribosomal RNA small sub 99.6 1.9E-15 6.4E-20 118.6 10.1 104 6-121 79-188 (249)
128 1g6q_1 HnRNP arginine N-methyl 99.6 1.5E-15 5.1E-20 123.8 9.7 101 8-114 39-142 (328)
129 1qzz_A RDMB, aclacinomycin-10- 99.6 3.8E-15 1.3E-19 123.2 12.1 104 6-118 181-288 (374)
130 3q87_B N6 adenine specific DNA 99.6 2.5E-15 8.5E-20 111.2 9.8 100 8-119 24-125 (170)
131 1p91_A Ribosomal RNA large sub 99.6 3.9E-15 1.3E-19 117.6 11.3 96 7-120 85-181 (269)
132 3tma_A Methyltransferase; thum 99.6 1.9E-14 6.3E-19 118.4 15.7 113 6-119 202-319 (354)
133 1l3i_A Precorrin-6Y methyltran 99.6 1.9E-15 6.6E-20 112.9 9.0 100 7-119 33-136 (192)
134 2ip2_A Probable phenazine-spec 99.6 2.5E-15 8.6E-20 122.5 10.3 103 9-120 169-275 (334)
135 2fhp_A Methylase, putative; al 99.6 7.5E-16 2.6E-20 115.0 6.4 105 7-119 44-156 (187)
136 3gdh_A Trimethylguanosine synt 99.6 4E-17 1.4E-21 127.1 -0.7 99 7-115 78-179 (241)
137 3mq2_A 16S rRNA methyltransfer 99.6 7.9E-16 2.7E-20 118.0 6.3 101 7-116 27-139 (218)
138 2y1w_A Histone-arginine methyl 99.6 2.4E-15 8.3E-20 123.5 9.5 102 7-116 50-154 (348)
139 3reo_A (ISO)eugenol O-methyltr 99.6 4.7E-15 1.6E-19 122.6 10.5 102 6-121 202-304 (368)
140 3u81_A Catechol O-methyltransf 99.6 2.7E-15 9.2E-20 115.5 8.5 106 7-120 58-173 (221)
141 2pjd_A Ribosomal RNA small sub 99.6 4.1E-15 1.4E-19 121.9 9.8 107 8-119 197-305 (343)
142 1g8a_A Fibrillarin-like PRE-rR 99.6 1.4E-14 4.9E-19 111.6 12.3 102 6-116 72-177 (227)
143 4dzr_A Protein-(glutamine-N5) 99.6 1.9E-16 6.7E-21 120.5 1.6 112 6-119 29-166 (215)
144 3bzb_A Uncharacterized protein 99.6 1.4E-14 4.6E-19 115.6 12.3 104 7-117 79-205 (281)
145 1tw3_A COMT, carminomycin 4-O- 99.6 9.5E-15 3.3E-19 120.2 11.6 105 6-119 182-290 (360)
146 3p9c_A Caffeic acid O-methyltr 99.6 6.1E-15 2.1E-19 121.8 10.3 102 6-121 200-302 (364)
147 2frn_A Hypothetical protein PH 99.6 4E-15 1.4E-19 118.6 8.7 99 8-119 126-227 (278)
148 2yxe_A Protein-L-isoaspartate 99.6 6.8E-15 2.3E-19 112.4 9.4 101 6-120 76-180 (215)
149 3giw_A Protein of unknown func 99.6 4.5E-15 1.5E-19 117.1 8.4 110 7-121 78-204 (277)
150 1i1n_A Protein-L-isoaspartate 99.6 6.1E-15 2.1E-19 113.6 9.0 99 7-119 77-184 (226)
151 3p2e_A 16S rRNA methylase; met 99.6 4.4E-15 1.5E-19 114.8 8.0 107 8-116 25-138 (225)
152 3ntv_A MW1564 protein; rossman 99.6 4.9E-15 1.7E-19 114.9 8.2 101 7-117 71-176 (232)
153 1o9g_A RRNA methyltransferase; 99.6 1.1E-14 3.8E-19 114.0 10.1 112 7-118 51-215 (250)
154 3lst_A CALO1 methyltransferase 99.6 1.4E-14 4.6E-19 119.0 10.8 103 6-120 183-289 (348)
155 2yxd_A Probable cobalt-precorr 99.6 1.5E-14 5.3E-19 107.2 10.1 97 7-119 35-133 (183)
156 1dl5_A Protein-L-isoaspartate 99.6 6.2E-15 2.1E-19 119.5 8.5 97 7-117 75-175 (317)
157 3sso_A Methyltransferase; macr 99.6 2E-15 6.9E-20 124.5 5.5 97 7-119 216-326 (419)
158 1fp2_A Isoflavone O-methyltran 99.6 9.6E-15 3.3E-19 120.0 9.3 100 7-120 188-291 (352)
159 2nxc_A L11 mtase, ribosomal pr 99.6 4.8E-15 1.6E-19 116.6 7.2 100 7-119 120-220 (254)
160 1fp1_D Isoliquiritigenin 2'-O- 99.6 6.4E-15 2.2E-19 121.9 8.2 100 6-119 208-308 (372)
161 3b3j_A Histone-arginine methyl 99.6 8.2E-15 2.8E-19 125.0 9.0 101 7-115 158-261 (480)
162 4hc4_A Protein arginine N-meth 99.6 9.3E-15 3.2E-19 120.6 8.8 101 8-115 84-187 (376)
163 2vdv_E TRNA (guanine-N(7)-)-me 99.6 2.7E-14 9.3E-19 111.6 11.1 111 7-117 49-173 (246)
164 3tfw_A Putative O-methyltransf 99.6 1.8E-14 6.1E-19 112.9 10.0 102 7-118 63-171 (248)
165 3id6_C Fibrillarin-like rRNA/T 99.6 4.3E-14 1.5E-18 109.4 11.8 104 5-117 74-181 (232)
166 3adn_A Spermidine synthase; am 99.6 1.7E-14 5.7E-19 115.8 9.8 105 8-117 84-198 (294)
167 3dr5_A Putative O-methyltransf 99.5 7E-15 2.4E-19 113.4 7.2 99 9-117 58-163 (221)
168 3hp7_A Hemolysin, putative; st 99.5 6.1E-15 2.1E-19 117.6 7.1 97 7-116 85-184 (291)
169 1jg1_A PIMT;, protein-L-isoasp 99.5 1.4E-14 4.7E-19 112.5 8.8 98 7-119 91-191 (235)
170 1ws6_A Methyltransferase; stru 99.5 3E-15 1E-19 110.0 4.8 106 7-120 41-150 (171)
171 2pwy_A TRNA (adenine-N(1)-)-me 99.5 1.1E-14 3.8E-19 114.1 8.2 100 7-119 96-200 (258)
172 3bwc_A Spermidine synthase; SA 99.5 1.1E-14 3.7E-19 117.5 8.1 106 7-117 95-210 (304)
173 1ej0_A FTSJ; methyltransferase 99.5 2.9E-14 9.8E-19 104.9 9.6 105 7-122 22-141 (180)
174 1u2z_A Histone-lysine N-methyl 99.5 3.8E-14 1.3E-18 118.9 10.9 103 7-117 242-359 (433)
175 2b3t_A Protein methyltransfera 99.5 4.3E-14 1.5E-18 112.3 10.7 109 7-117 109-238 (276)
176 3gjy_A Spermidine synthase; AP 99.5 2.6E-14 8.9E-19 115.2 9.3 109 8-119 90-202 (317)
177 1ne2_A Hypothetical protein TA 99.5 7.6E-14 2.6E-18 105.5 11.4 96 7-116 51-146 (200)
178 1r18_A Protein-L-isoaspartate( 99.5 1.3E-14 4.3E-19 112.1 7.1 97 7-118 84-195 (227)
179 1i9g_A Hypothetical protein RV 99.5 1.8E-14 6.3E-19 114.4 7.6 100 7-119 99-205 (280)
180 3duw_A OMT, O-methyltransferas 99.5 3.5E-14 1.2E-18 109.1 8.3 102 7-118 58-168 (223)
181 4a6d_A Hydroxyindole O-methylt 99.5 2.9E-13 1E-17 111.3 13.8 105 7-120 179-286 (353)
182 1xj5_A Spermidine synthase 1; 99.5 4E-14 1.4E-18 115.5 8.4 105 7-116 120-234 (334)
183 3c3p_A Methyltransferase; NP_9 99.5 2.5E-14 8.6E-19 109.0 6.7 98 8-117 57-160 (210)
184 3tr6_A O-methyltransferase; ce 99.5 2.9E-14 1E-18 109.7 7.1 102 8-119 65-176 (225)
185 2bm8_A Cephalosporin hydroxyla 99.5 1.8E-14 6.1E-19 112.2 5.9 98 8-118 82-188 (236)
186 2igt_A SAM dependent methyltra 99.5 6.4E-14 2.2E-18 114.3 9.2 111 8-119 154-274 (332)
187 1uir_A Polyamine aminopropyltr 99.5 2.8E-14 9.4E-19 115.6 6.9 107 8-117 78-195 (314)
188 2pbf_A Protein-L-isoaspartate 99.5 3.3E-14 1.1E-18 109.6 7.0 99 7-118 80-194 (227)
189 2gpy_A O-methyltransferase; st 99.5 3.2E-14 1.1E-18 110.2 7.0 100 8-118 55-161 (233)
190 1ixk_A Methyltransferase; open 99.5 1.1E-13 3.6E-18 112.2 10.2 112 7-119 118-248 (315)
191 3mb5_A SAM-dependent methyltra 99.5 7.9E-14 2.7E-18 109.3 9.1 99 7-119 93-196 (255)
192 2plw_A Ribosomal RNA methyltra 99.5 9.9E-14 3.4E-18 104.8 9.3 102 8-120 23-157 (201)
193 3dou_A Ribosomal RNA large sub 99.5 3.9E-13 1.3E-17 101.3 12.4 103 7-122 25-144 (191)
194 3a27_A TYW2, uncharacterized p 99.5 8E-14 2.7E-18 110.7 9.1 101 7-120 119-222 (272)
195 3lec_A NADB-rossmann superfami 99.5 2.2E-13 7.5E-18 105.0 11.2 119 8-138 22-144 (230)
196 2pt6_A Spermidine synthase; tr 99.5 5.2E-14 1.8E-18 114.3 8.0 104 8-117 117-230 (321)
197 1inl_A Spermidine synthase; be 99.5 4.7E-14 1.6E-18 113.3 7.4 107 8-117 91-205 (296)
198 1zg3_A Isoflavanone 4'-O-methy 99.5 1.1E-13 3.7E-18 114.0 9.6 99 7-119 193-295 (358)
199 1iy9_A Spermidine synthase; ro 99.5 6E-14 2.1E-18 111.6 7.4 106 8-117 76-189 (275)
200 2qm3_A Predicted methyltransfe 99.5 2.4E-13 8.1E-18 112.6 11.2 97 8-113 173-273 (373)
201 2yvl_A TRMI protein, hypotheti 99.5 1.7E-13 5.8E-18 106.7 9.8 99 7-119 91-192 (248)
202 2o07_A Spermidine synthase; st 99.5 4.9E-14 1.7E-18 113.6 6.7 106 8-117 96-209 (304)
203 1wy7_A Hypothetical protein PH 99.5 4.7E-13 1.6E-17 101.6 11.7 99 7-117 49-148 (207)
204 2b25_A Hypothetical protein; s 99.5 2E-13 6.8E-18 111.4 10.1 101 7-119 105-221 (336)
205 2b2c_A Spermidine synthase; be 99.5 6.5E-14 2.2E-18 113.3 7.0 104 8-117 109-222 (314)
206 2i7c_A Spermidine synthase; tr 99.5 6.6E-14 2.3E-18 111.8 7.0 105 8-117 79-192 (283)
207 3ajd_A Putative methyltransfer 99.5 9.2E-14 3.1E-18 110.4 7.8 112 7-119 83-213 (274)
208 3r3h_A O-methyltransferase, SA 99.5 9.1E-15 3.1E-19 114.2 1.9 102 7-118 60-171 (242)
209 3gnl_A Uncharacterized protein 99.5 3.9E-13 1.4E-17 104.4 11.1 118 8-137 22-143 (244)
210 1mjf_A Spermidine synthase; sp 99.5 6.8E-14 2.3E-18 111.6 7.0 103 8-117 76-193 (281)
211 1o54_A SAM-dependent O-methylt 99.5 6E-13 2.1E-17 105.7 12.4 99 7-119 112-215 (277)
212 2h00_A Methyltransferase 10 do 99.5 6.1E-14 2.1E-18 110.0 6.1 110 7-117 65-192 (254)
213 2b78_A Hypothetical protein SM 99.5 8.7E-14 3E-18 115.7 7.2 114 7-120 212-334 (385)
214 1sui_A Caffeoyl-COA O-methyltr 99.5 7.3E-14 2.5E-18 109.4 6.3 101 7-117 79-190 (247)
215 3kr9_A SAM-dependent methyltra 99.4 6.9E-13 2.4E-17 102.1 11.2 117 9-138 17-138 (225)
216 2hnk_A SAM-dependent O-methylt 99.4 2.7E-13 9.1E-18 105.4 8.9 101 8-118 61-182 (239)
217 2wa2_A Non-structural protein 99.4 3.7E-14 1.3E-18 112.8 4.0 103 8-119 83-195 (276)
218 2as0_A Hypothetical protein PH 99.4 1.1E-13 3.8E-18 115.5 6.9 114 7-120 217-338 (396)
219 3tm4_A TRNA (guanine N2-)-meth 99.4 6.8E-13 2.3E-17 109.9 11.2 109 7-118 217-330 (373)
220 3opn_A Putative hemolysin; str 99.4 7.4E-14 2.5E-18 108.4 4.9 96 7-117 37-137 (232)
221 2oxt_A Nucleoside-2'-O-methylt 99.4 5.1E-14 1.7E-18 111.4 4.0 103 8-119 75-187 (265)
222 2ld4_A Anamorsin; methyltransf 99.4 3.7E-14 1.3E-18 105.1 2.9 86 8-117 13-101 (176)
223 3v97_A Ribosomal RNA large sub 99.4 5.4E-13 1.8E-17 118.5 10.4 111 8-119 540-659 (703)
224 2nyu_A Putative ribosomal RNA 99.4 2.9E-13 1E-17 101.7 7.3 102 8-121 23-149 (196)
225 3cbg_A O-methyltransferase; cy 99.4 3E-13 1E-17 104.9 7.5 102 8-119 73-184 (232)
226 1zq9_A Probable dimethyladenos 99.4 1.8E-12 6E-17 103.6 11.9 99 6-114 27-144 (285)
227 3c0k_A UPF0064 protein YCCW; P 99.4 4.2E-13 1.4E-17 111.9 8.7 113 7-119 220-341 (396)
228 2p41_A Type II methyltransfera 99.4 1.6E-13 5.5E-18 110.6 5.8 99 8-120 83-194 (305)
229 4dmg_A Putative uncharacterize 99.4 4.6E-13 1.6E-17 111.4 8.5 110 8-120 215-329 (393)
230 1nv8_A HEMK protein; class I a 99.4 7.6E-13 2.6E-17 105.7 9.4 106 8-116 124-248 (284)
231 2avd_A Catechol-O-methyltransf 99.4 1.9E-13 6.6E-18 105.3 5.7 102 7-118 69-180 (229)
232 2cmg_A Spermidine synthase; tr 99.4 1.9E-13 6.5E-18 107.9 5.8 93 8-117 73-171 (262)
233 1wxx_A TT1595, hypothetical pr 99.4 2.9E-13 9.8E-18 112.5 6.8 112 8-120 210-328 (382)
234 3c3y_A Pfomt, O-methyltransfer 99.4 4.4E-13 1.5E-17 104.3 7.4 101 7-117 70-181 (237)
235 3k6r_A Putative transferase PH 99.4 8.3E-13 2.8E-17 104.8 7.3 98 8-118 126-226 (278)
236 2yxl_A PH0851 protein, 450AA l 99.4 2.7E-12 9.2E-17 108.8 10.5 113 7-119 259-391 (450)
237 3frh_A 16S rRNA methylase; met 99.4 2.7E-12 9.2E-17 99.0 9.0 101 7-117 105-206 (253)
238 3lcv_B Sisomicin-gentamicin re 99.3 1.6E-12 5.5E-17 101.2 6.4 101 8-118 133-237 (281)
239 2frx_A Hypothetical protein YE 99.3 4E-12 1.4E-16 108.3 9.3 113 7-119 117-248 (479)
240 2yx1_A Hypothetical protein MJ 99.3 4E-12 1.4E-16 103.8 8.4 97 7-120 195-294 (336)
241 2f8l_A Hypothetical protein LM 99.3 3.3E-11 1.1E-15 98.6 13.8 109 7-117 130-256 (344)
242 2h1r_A Dimethyladenosine trans 99.3 1.1E-11 3.9E-16 99.5 10.5 75 7-85 42-118 (299)
243 1qam_A ERMC' methyltransferase 99.3 2.8E-11 9.5E-16 94.5 12.2 75 7-84 30-105 (244)
244 3m4x_A NOL1/NOP2/SUN family pr 99.3 2.8E-12 9.7E-17 108.3 6.6 113 7-119 105-236 (456)
245 3m6w_A RRNA methylase; rRNA me 99.3 4.7E-12 1.6E-16 107.1 7.1 112 7-119 101-231 (464)
246 3gru_A Dimethyladenosine trans 99.3 5.9E-12 2E-16 100.8 7.3 77 7-85 50-126 (295)
247 1sqg_A SUN protein, FMU protei 99.3 1.4E-11 4.9E-16 103.7 9.1 113 7-119 246-376 (429)
248 1yub_A Ermam, rRNA methyltrans 99.2 5.3E-13 1.8E-17 104.3 -0.6 101 7-116 29-144 (245)
249 1uwv_A 23S rRNA (uracil-5-)-me 99.2 7.2E-11 2.5E-15 99.5 12.0 97 7-116 286-388 (433)
250 2jjq_A Uncharacterized RNA met 99.2 7.5E-11 2.6E-15 99.1 11.9 96 7-117 290-387 (425)
251 2qfm_A Spermine synthase; sper 99.2 2E-11 6.9E-16 99.7 8.0 113 7-119 188-316 (364)
252 2xyq_A Putative 2'-O-methyl tr 99.2 3.8E-11 1.3E-15 95.8 8.4 99 7-120 63-174 (290)
253 2ih2_A Modification methylase 99.2 2.6E-11 8.7E-16 101.6 7.0 102 8-118 40-165 (421)
254 3ldu_A Putative methylase; str 99.2 1.5E-10 5.3E-15 96.0 11.0 109 6-119 194-346 (385)
255 3tqs_A Ribosomal RNA small sub 99.2 5.7E-11 1.9E-15 93.3 7.7 74 7-83 29-106 (255)
256 3k0b_A Predicted N6-adenine-sp 99.2 3E-10 1E-14 94.5 11.9 109 6-119 200-352 (393)
257 3ldg_A Putative uncharacterize 99.2 4.5E-10 1.5E-14 93.1 12.7 109 6-119 193-345 (384)
258 3fut_A Dimethyladenosine trans 99.1 1.1E-10 3.7E-15 92.4 8.0 72 10-84 49-121 (271)
259 3bt7_A TRNA (uracil-5-)-methyl 99.1 1E-10 3.6E-15 96.6 8.0 98 9-120 215-329 (369)
260 2okc_A Type I restriction enzy 99.1 1.3E-10 4.3E-15 98.4 8.7 109 7-117 171-307 (445)
261 2dul_A N(2),N(2)-dimethylguano 99.1 1.1E-10 3.6E-15 96.7 5.7 99 8-117 48-164 (378)
262 2b9e_A NOL1/NOP2/SUN domain fa 99.0 1.8E-09 6.2E-14 87.0 11.7 111 7-119 102-236 (309)
263 3axs_A Probable N(2),N(2)-dime 99.0 3.5E-10 1.2E-14 93.8 6.0 99 8-117 53-158 (392)
264 3v97_A Ribosomal RNA large sub 99.0 4.1E-09 1.4E-13 93.7 11.5 108 7-117 190-347 (703)
265 3ftd_A Dimethyladenosine trans 99.0 2.6E-09 9E-14 83.5 9.0 73 7-83 31-105 (249)
266 1qyr_A KSGA, high level kasuga 98.9 7.6E-10 2.6E-14 86.7 5.4 74 7-84 21-101 (252)
267 2r6z_A UPF0341 protein in RSP 98.9 3.4E-10 1.2E-14 89.0 3.4 77 8-85 84-173 (258)
268 3uzu_A Ribosomal RNA small sub 98.9 1.8E-09 6.2E-14 85.7 6.5 74 7-83 42-124 (279)
269 2efj_A 3,7-dimethylxanthine me 98.9 1.6E-08 5.4E-13 83.5 11.6 115 8-122 53-230 (384)
270 3o4f_A Spermidine synthase; am 98.9 1.3E-08 4.4E-13 81.0 10.5 106 8-116 84-197 (294)
271 2ar0_A M.ecoki, type I restric 98.9 2.2E-09 7.6E-14 92.8 6.5 111 7-117 169-312 (541)
272 3ll7_A Putative methyltransfer 98.9 8.1E-10 2.8E-14 91.9 3.6 75 8-83 94-173 (410)
273 4gqb_A Protein arginine N-meth 98.9 3E-09 1E-13 92.9 6.4 97 9-113 359-463 (637)
274 3evf_A RNA-directed RNA polyme 98.8 3.1E-09 1.1E-13 83.2 5.6 108 8-119 75-186 (277)
275 1m6y_A S-adenosyl-methyltransf 98.8 2.9E-09 9.8E-14 85.5 4.9 75 7-81 26-106 (301)
276 3b5i_A S-adenosyl-L-methionine 98.8 1.7E-08 5.8E-13 83.2 9.1 115 7-122 52-230 (374)
277 3ua3_A Protein arginine N-meth 98.8 4E-09 1.4E-13 92.3 5.6 101 8-114 410-531 (745)
278 3cvo_A Methyltransferase-like 98.8 5.4E-08 1.9E-12 73.4 10.1 96 8-117 31-154 (202)
279 3lkd_A Type I restriction-modi 98.7 7.3E-08 2.5E-12 83.2 11.1 111 7-117 221-358 (542)
280 2oyr_A UPF0341 protein YHIQ; a 98.7 7E-09 2.4E-13 81.4 4.1 93 9-111 90-194 (258)
281 3c6k_A Spermine synthase; sper 98.7 6.5E-08 2.2E-12 79.3 8.2 109 8-116 206-330 (381)
282 1m6e_X S-adenosyl-L-methionnin 98.6 8.7E-08 3E-12 78.4 7.9 115 7-122 51-214 (359)
283 3s1s_A Restriction endonucleas 98.6 2E-07 6.9E-12 82.9 10.4 111 7-117 321-465 (878)
284 3khk_A Type I restriction-modi 98.6 1E-07 3.5E-12 82.3 7.8 109 9-117 246-395 (544)
285 3gcz_A Polyprotein; flavivirus 98.6 2.6E-08 8.9E-13 78.1 3.4 108 8-119 91-203 (282)
286 2qy6_A UPF0209 protein YFCK; s 98.5 1.5E-07 5E-12 73.9 5.0 111 7-123 60-217 (257)
287 2k4m_A TR8_protein, UPF0146 pr 98.5 1.4E-07 4.7E-12 66.9 4.2 85 8-120 36-124 (153)
288 2wk1_A NOVP; transferase, O-me 98.4 6.2E-07 2.1E-11 71.1 8.3 104 7-119 106-246 (282)
289 4auk_A Ribosomal RNA large sub 98.4 2.1E-06 7.1E-11 70.2 10.3 95 7-119 211-308 (375)
290 1wg8_A Predicted S-adenosylmet 98.3 1.7E-06 5.8E-11 68.1 7.5 71 7-80 22-96 (285)
291 3eld_A Methyltransferase; flav 98.3 1.1E-06 3.7E-11 69.4 6.3 108 7-119 81-193 (300)
292 4fzv_A Putative methyltransfer 98.3 1.7E-06 5.8E-11 70.9 7.0 113 7-119 148-286 (359)
293 3tka_A Ribosomal RNA small sub 98.1 5E-06 1.7E-10 67.0 6.0 74 8-83 58-138 (347)
294 2px2_A Genome polyprotein [con 98.0 7.5E-06 2.6E-10 63.3 5.0 103 8-119 74-185 (269)
295 3ufb_A Type I restriction-modi 97.9 7.7E-05 2.6E-09 64.3 11.2 110 8-117 218-362 (530)
296 2vz8_A Fatty acid synthase; tr 97.9 1.8E-06 6.1E-11 86.1 0.6 104 7-118 1240-1349(2512)
297 3lkz_A Non-structural protein 97.8 3E-05 1E-09 61.1 5.8 105 8-120 95-207 (321)
298 3p8z_A Mtase, non-structural p 97.8 0.00019 6.5E-09 54.9 9.3 104 8-119 79-188 (267)
299 2zig_A TTHA0409, putative modi 97.7 4.5E-05 1.6E-09 60.8 5.5 43 8-51 236-278 (297)
300 3r24_A NSP16, 2'-O-methyl tran 97.5 0.00026 8.7E-09 55.9 7.5 103 1-121 105-221 (344)
301 1i4w_A Mitochondrial replicati 97.5 0.0002 7E-09 58.4 7.1 58 8-66 59-117 (353)
302 2oo3_A Protein involved in cat 97.5 0.00017 5.7E-09 56.8 5.7 101 8-116 92-197 (283)
303 1rjd_A PPM1P, carboxy methyl t 97.4 0.00089 3E-08 54.3 9.9 108 7-121 97-236 (334)
304 3g7u_A Cytosine-specific methy 97.4 0.0012 4.1E-08 54.4 10.1 73 9-84 3-82 (376)
305 2c7p_A Modification methylase 97.4 0.0016 5.5E-08 52.6 10.7 76 6-86 9-84 (327)
306 1g55_A DNA cytosine methyltran 97.3 0.00038 1.3E-08 56.7 6.1 76 8-86 2-81 (343)
307 2uyo_A Hypothetical protein ML 97.1 0.0068 2.3E-07 48.5 11.5 105 8-119 103-220 (310)
308 3vyw_A MNMC2; tRNA wobble urid 96.8 0.0044 1.5E-07 49.4 7.8 127 8-144 97-247 (308)
309 2qrv_A DNA (cytosine-5)-methyl 96.8 0.013 4.4E-07 46.6 10.4 82 3-87 11-97 (295)
310 2zig_A TTHA0409, putative modi 96.5 0.0026 8.8E-08 50.6 4.3 64 54-117 20-97 (297)
311 3ubt_Y Modification methylase 96.5 0.023 8E-07 45.5 10.1 98 9-110 1-104 (331)
312 3tos_A CALS11; methyltransfera 96.4 0.013 4.3E-07 45.6 8.1 105 8-121 70-221 (257)
313 1f8f_A Benzyl alcohol dehydrog 96.3 0.015 5.1E-07 47.5 8.2 94 8-118 191-290 (371)
314 1zkd_A DUF185; NESG, RPR58, st 96.2 0.017 5.6E-07 47.6 8.1 74 8-86 81-162 (387)
315 3qv2_A 5-cytosine DNA methyltr 96.2 0.02 6.7E-07 46.2 8.4 74 8-85 10-88 (327)
316 3fpc_A NADP-dependent alcohol 96.0 0.038 1.3E-06 44.6 9.2 95 7-118 166-267 (352)
317 4h0n_A DNMT2; SAH binding, tra 95.9 0.0091 3.1E-07 48.3 5.0 75 9-86 4-82 (333)
318 3me5_A Cytosine-specific methy 95.8 0.038 1.3E-06 46.9 8.5 76 8-84 88-180 (482)
319 2dph_A Formaldehyde dismutase; 95.7 0.05 1.7E-06 44.8 8.8 103 8-117 186-299 (398)
320 3m6i_A L-arabinitol 4-dehydrog 95.7 0.097 3.3E-06 42.4 10.3 95 8-118 180-284 (363)
321 3two_A Mannitol dehydrogenase; 95.3 0.044 1.5E-06 44.2 7.1 90 7-119 176-267 (348)
322 4ej6_A Putative zinc-binding d 95.3 0.075 2.5E-06 43.3 8.5 94 8-118 183-285 (370)
323 1pl8_A Human sorbitol dehydrog 95.3 0.069 2.3E-06 43.2 8.1 94 8-118 172-274 (356)
324 1boo_A Protein (N-4 cytosine-s 95.2 0.018 6E-07 46.3 4.4 64 54-117 13-84 (323)
325 1kol_A Formaldehyde dehydrogen 94.9 0.12 4.2E-06 42.4 8.7 105 8-117 186-300 (398)
326 3s2e_A Zinc-containing alcohol 94.9 0.086 2.9E-06 42.3 7.5 93 7-117 166-263 (340)
327 2py6_A Methyltransferase FKBM; 94.8 0.043 1.5E-06 45.5 5.7 60 6-65 225-293 (409)
328 3fwz_A Inner membrane protein 94.8 0.62 2.1E-05 32.0 11.2 94 8-117 7-105 (140)
329 1e3j_A NADP(H)-dependent ketos 94.7 0.27 9.3E-06 39.6 10.0 93 8-118 169-272 (352)
330 3uko_A Alcohol dehydrogenase c 94.6 0.13 4.5E-06 41.9 8.2 95 7-118 193-296 (378)
331 3pvc_A TRNA 5-methylaminomethy 94.6 0.03 1E-06 49.6 4.4 112 7-124 58-216 (689)
332 4dvj_A Putative zinc-dependent 94.4 0.19 6.5E-06 40.8 8.5 91 9-116 173-269 (363)
333 3uog_A Alcohol dehydrogenase; 94.4 0.16 5.4E-06 41.2 8.1 93 7-118 189-288 (363)
334 4f3n_A Uncharacterized ACR, CO 94.4 0.045 1.6E-06 45.6 4.7 44 8-51 138-187 (432)
335 1uuf_A YAHK, zinc-type alcohol 94.3 0.061 2.1E-06 43.8 5.5 91 8-117 195-288 (369)
336 1boo_A Protein (N-4 cytosine-s 94.1 0.1 3.4E-06 41.9 6.2 56 9-65 254-310 (323)
337 3nx4_A Putative oxidoreductase 94.0 0.22 7.5E-06 39.5 8.1 90 10-118 149-242 (324)
338 2fzw_A Alcohol dehydrogenase c 93.9 0.22 7.4E-06 40.5 8.0 94 8-118 191-293 (373)
339 1p0f_A NADP-dependent alcohol 93.9 0.19 6.7E-06 40.8 7.8 94 8-118 192-294 (373)
340 2hwk_A Helicase NSP2; rossman 93.8 0.12 4E-06 40.6 5.7 101 16-122 150-259 (320)
341 3jv7_A ADH-A; dehydrogenase, n 93.8 0.13 4.4E-06 41.4 6.3 93 7-117 171-270 (345)
342 3ip1_A Alcohol dehydrogenase, 93.8 0.32 1.1E-05 40.0 8.9 100 7-118 213-319 (404)
343 2d8a_A PH0655, probable L-thre 93.7 0.25 8.4E-06 39.7 7.9 94 8-118 168-268 (348)
344 1cdo_A Alcohol dehydrogenase; 93.7 0.18 6.3E-06 40.9 7.2 94 8-118 193-295 (374)
345 1pqw_A Polyketide synthase; ro 93.7 0.2 7E-06 36.6 6.9 90 7-117 38-137 (198)
346 2jhf_A Alcohol dehydrogenase E 93.7 0.23 7.8E-06 40.3 7.7 93 8-117 192-293 (374)
347 3ps9_A TRNA 5-methylaminomethy 93.6 0.098 3.3E-06 46.1 5.8 111 7-123 66-223 (676)
348 1rjw_A ADH-HT, alcohol dehydro 93.4 0.26 8.9E-06 39.5 7.5 90 8-118 165-262 (339)
349 2eih_A Alcohol dehydrogenase; 93.4 0.56 1.9E-05 37.5 9.5 90 7-117 166-265 (343)
350 2h6e_A ADH-4, D-arabinose 1-de 93.4 0.082 2.8E-06 42.5 4.5 92 7-117 170-269 (344)
351 2b5w_A Glucose dehydrogenase; 93.3 0.24 8.2E-06 40.0 7.2 89 9-118 174-274 (357)
352 1e3i_A Alcohol dehydrogenase, 93.1 0.26 9E-06 40.0 7.2 94 8-118 196-298 (376)
353 3ius_A Uncharacterized conserv 93.1 1.8 6.1E-05 33.2 11.7 64 9-83 6-73 (286)
354 4a2c_A Galactitol-1-phosphate 93.0 0.64 2.2E-05 37.1 9.3 95 7-118 160-261 (346)
355 1vj0_A Alcohol dehydrogenase, 93.0 0.34 1.1E-05 39.5 7.7 94 8-118 196-299 (380)
356 3ado_A Lambda-crystallin; L-gu 93.0 0.84 2.9E-05 36.5 9.7 106 1-122 1-128 (319)
357 3swr_A DNA (cytosine-5)-methyl 92.6 1.1 3.7E-05 41.4 11.1 78 6-86 538-631 (1002)
358 3grk_A Enoyl-(acyl-carrier-pro 92.6 0.83 2.9E-05 35.7 9.2 109 9-118 32-170 (293)
359 3iei_A Leucine carboxyl methyl 92.4 1.5 5E-05 35.3 10.5 108 8-122 91-234 (334)
360 1v3u_A Leukotriene B4 12- hydr 92.4 0.18 6.2E-06 40.2 5.2 89 8-117 146-244 (333)
361 1jvb_A NAD(H)-dependent alcoho 92.4 0.32 1.1E-05 39.1 6.7 91 8-118 171-272 (347)
362 1eg2_A Modification methylase 92.3 0.19 6.4E-06 40.2 5.2 43 9-52 244-289 (319)
363 4b7c_A Probable oxidoreductase 92.3 0.23 7.9E-06 39.6 5.7 93 7-117 149-248 (336)
364 4eso_A Putative oxidoreductase 92.1 0.87 3E-05 34.7 8.7 106 9-117 9-138 (255)
365 3gms_A Putative NADPH:quinone 92.0 0.28 9.5E-06 39.3 5.9 92 8-118 145-244 (340)
366 2j3h_A NADP-dependent oxidored 91.9 0.36 1.2E-05 38.6 6.5 90 8-117 156-255 (345)
367 2dq4_A L-threonine 3-dehydroge 91.7 0.29 1E-05 39.2 5.7 94 7-118 164-263 (343)
368 3oig_A Enoyl-[acyl-carrier-pro 91.6 1.7 5.8E-05 33.1 9.9 108 9-117 8-147 (266)
369 2hcy_A Alcohol dehydrogenase 1 91.4 0.16 5.4E-06 40.9 3.8 91 8-118 170-270 (347)
370 1eg2_A Modification methylase 91.2 0.16 5.3E-06 40.7 3.5 62 56-117 39-106 (319)
371 3jyn_A Quinone oxidoreductase; 91.1 0.64 2.2E-05 36.9 7.1 92 8-118 141-240 (325)
372 1piw_A Hypothetical zinc-type 91.1 0.16 5.6E-06 41.0 3.6 93 8-117 180-276 (360)
373 3qwb_A Probable quinone oxidor 91.1 0.74 2.5E-05 36.6 7.5 92 7-117 148-247 (334)
374 3ggo_A Prephenate dehydrogenas 91.1 2 6.9E-05 34.0 10.0 90 9-115 34-126 (314)
375 3o26_A Salutaridine reductase; 91.0 4.3 0.00015 31.3 12.2 74 9-83 13-101 (311)
376 1qor_A Quinone oxidoreductase; 90.9 0.84 2.9E-05 36.1 7.7 90 8-118 141-240 (327)
377 4ft4_B DNA (cytosine-5)-methyl 90.9 1.1 3.7E-05 40.3 9.1 54 7-63 211-270 (784)
378 3gvc_A Oxidoreductase, probabl 90.8 2 6.8E-05 33.2 9.6 106 9-117 30-161 (277)
379 3l9w_A Glutathione-regulated p 90.8 2 6.8E-05 35.5 10.0 92 8-117 4-102 (413)
380 2cdc_A Glucose dehydrogenase g 90.8 0.58 2E-05 37.8 6.7 87 8-118 181-279 (366)
381 3pxx_A Carveol dehydrogenase; 90.7 1.9 6.4E-05 33.2 9.4 107 9-117 11-153 (287)
382 2cf5_A Atccad5, CAD, cinnamyl 90.7 0.15 5E-06 41.3 3.0 92 8-117 181-275 (357)
383 3k31_A Enoyl-(acyl-carrier-pro 90.6 1 3.5E-05 35.2 7.8 109 9-118 31-169 (296)
384 1yb5_A Quinone oxidoreductase; 90.5 0.88 3E-05 36.6 7.4 89 8-117 171-269 (351)
385 1xa0_A Putative NADPH dependen 90.2 0.63 2.2E-05 36.9 6.3 89 10-117 152-246 (328)
386 1yqd_A Sinapyl alcohol dehydro 90.1 0.26 9E-06 39.9 4.1 93 8-118 188-283 (366)
387 3edm_A Short chain dehydrogena 90.1 1.3 4.5E-05 33.7 7.9 110 7-117 7-143 (259)
388 1wma_A Carbonyl reductase [NAD 90.0 0.96 3.3E-05 34.4 7.1 107 9-117 5-138 (276)
389 3ek2_A Enoyl-(acyl-carrier-pro 90.0 1.6 5.6E-05 33.2 8.4 110 7-117 13-153 (271)
390 4eye_A Probable oxidoreductase 90.0 0.74 2.5E-05 36.8 6.6 90 8-117 160-257 (342)
391 1zcj_A Peroxisomal bifunctiona 89.8 5.3 0.00018 33.4 11.9 92 9-115 38-148 (463)
392 1wly_A CAAR, 2-haloacrylate re 89.7 2 6.9E-05 34.0 8.9 89 8-117 146-244 (333)
393 3goh_A Alcohol dehydrogenase, 89.6 0.33 1.1E-05 38.4 4.2 86 7-117 142-229 (315)
394 2j8z_A Quinone oxidoreductase; 89.6 1.8 6E-05 34.8 8.6 90 8-118 163-262 (354)
395 3l4b_C TRKA K+ channel protien 89.6 3.1 0.0001 30.7 9.4 90 9-115 1-97 (218)
396 3c85_A Putative glutathione-re 89.5 4.4 0.00015 28.9 11.4 94 8-117 39-139 (183)
397 3llv_A Exopolyphosphatase-rela 89.4 3.6 0.00012 27.9 11.2 64 9-80 7-77 (141)
398 3fbg_A Putative arginate lyase 89.2 1.3 4.4E-05 35.5 7.4 90 8-116 151-247 (346)
399 2c0c_A Zinc binding alcohol de 89.1 1.5 5.1E-05 35.4 7.8 91 8-117 164-261 (362)
400 1g60_A Adenine-specific methyl 89.0 0.18 6.1E-06 39.0 2.1 62 56-117 5-74 (260)
401 4eez_A Alcohol dehydrogenase 1 88.9 1.9 6.6E-05 34.3 8.3 94 8-118 164-264 (348)
402 2gdz_A NAD+-dependent 15-hydro 88.8 2.1 7.1E-05 32.6 8.2 74 9-83 8-96 (267)
403 3f9i_A 3-oxoacyl-[acyl-carrier 88.7 5.4 0.00018 29.8 10.4 74 7-83 13-94 (249)
404 3av4_A DNA (cytosine-5)-methyl 88.4 4 0.00014 38.9 10.9 77 7-86 850-942 (1330)
405 4fgs_A Probable dehydrogenase 88.3 2.8 9.5E-05 32.6 8.6 105 10-117 31-159 (273)
406 3krt_A Crotonyl COA reductase; 88.3 3.1 0.0001 34.7 9.4 93 7-117 228-344 (456)
407 3guy_A Short-chain dehydrogena 88.1 6.4 0.00022 29.1 11.1 71 10-83 3-82 (230)
408 2zb4_A Prostaglandin reductase 88.0 1.6 5.5E-05 35.0 7.3 90 9-117 162-260 (357)
409 1tt7_A YHFP; alcohol dehydroge 87.7 0.9 3.1E-05 36.0 5.5 91 9-118 152-248 (330)
410 2ew2_A 2-dehydropantoate 2-red 87.6 5.2 0.00018 31.0 9.9 93 9-117 4-108 (316)
411 3c24_A Putative oxidoreductase 87.4 4.7 0.00016 31.1 9.5 84 9-114 12-98 (286)
412 1lss_A TRK system potassium up 87.4 4.8 0.00016 26.8 10.3 91 8-116 4-101 (140)
413 1id1_A Putative potassium chan 87.2 5.6 0.00019 27.4 9.9 94 8-116 3-104 (153)
414 4e6p_A Probable sorbitol dehyd 87.1 4.4 0.00015 30.7 9.1 72 9-83 9-92 (259)
415 3tqh_A Quinone oxidoreductase; 86.9 2.3 7.7E-05 33.5 7.5 90 8-117 153-245 (321)
416 2km1_A Protein DRE2; yeast, an 86.8 0.23 8E-06 34.4 1.4 42 69-115 55-96 (136)
417 3ew7_A LMO0794 protein; Q8Y8U8 86.6 3.4 0.00012 30.0 8.0 96 9-117 1-102 (221)
418 3gg2_A Sugar dehydrogenase, UD 86.5 5.2 0.00018 33.4 9.8 103 9-117 3-122 (450)
419 2dpo_A L-gulonate 3-dehydrogen 86.2 5.5 0.00019 31.6 9.4 96 8-117 6-123 (319)
420 2f1k_A Prephenate dehydrogenas 86.2 7.2 0.00025 29.8 9.9 85 10-114 2-88 (279)
421 3ijr_A Oxidoreductase, short c 86.0 4.9 0.00017 31.2 8.9 108 9-117 48-182 (291)
422 4dqx_A Probable oxidoreductase 85.9 9.2 0.00031 29.3 10.4 106 9-117 28-159 (277)
423 1iz0_A Quinone oxidoreductase; 85.9 0.53 1.8E-05 36.9 3.2 88 8-117 126-218 (302)
424 4e12_A Diketoreductase; oxidor 85.4 6.1 0.00021 30.5 9.2 95 9-117 5-121 (283)
425 3h2s_A Putative NADH-flavin re 85.4 7.9 0.00027 28.1 9.5 98 10-117 2-104 (224)
426 1ja9_A 4HNR, 1,3,6,8-tetrahydr 85.2 2.2 7.7E-05 32.4 6.5 107 9-117 22-155 (274)
427 3i6i_A Putative leucoanthocyan 85.2 3 0.0001 33.0 7.5 102 6-119 8-121 (346)
428 4a0s_A Octenoyl-COA reductase/ 85.1 4.1 0.00014 33.7 8.5 93 7-117 220-336 (447)
429 2wyu_A Enoyl-[acyl carrier pro 85.0 1.6 5.6E-05 33.2 5.6 106 8-117 8-146 (261)
430 4dcm_A Ribosomal RNA large sub 85.0 12 0.00041 30.3 11.0 95 8-118 39-137 (375)
431 3trk_A Nonstructural polyprote 84.9 4.2 0.00014 31.6 7.5 57 72-128 210-270 (324)
432 3g0o_A 3-hydroxyisobutyrate de 84.8 5.2 0.00018 31.2 8.6 95 9-122 8-107 (303)
433 3qha_A Putative oxidoreductase 84.7 2.5 8.7E-05 33.0 6.7 94 8-122 15-110 (296)
434 2eez_A Alanine dehydrogenase; 84.7 0.56 1.9E-05 38.2 2.9 98 8-118 166-267 (369)
435 4dup_A Quinone oxidoreductase; 84.3 2.4 8.3E-05 33.9 6.6 91 8-117 168-265 (353)
436 3v2g_A 3-oxoacyl-[acyl-carrier 84.3 6.3 0.00021 30.2 8.7 108 9-117 32-165 (271)
437 2y0c_A BCEC, UDP-glucose dehyd 84.2 3.1 0.00011 35.1 7.3 106 6-117 6-128 (478)
438 3is3_A 17BETA-hydroxysteroid d 84.1 4.5 0.00015 30.9 7.8 109 9-118 19-153 (270)
439 3r3s_A Oxidoreductase; structu 83.4 3.8 0.00013 31.8 7.2 108 9-117 50-185 (294)
440 1bg6_A N-(1-D-carboxylethyl)-L 83.4 3.9 0.00014 32.5 7.5 94 8-116 4-108 (359)
441 4g65_A TRK system potassium up 83.4 1.3 4.5E-05 37.2 4.7 65 8-79 3-74 (461)
442 2g1u_A Hypothetical protein TM 83.3 3.9 0.00013 28.3 6.6 95 7-116 18-117 (155)
443 3d1l_A Putative NADP oxidoredu 83.3 13 0.00044 28.1 10.5 95 8-121 10-106 (266)
444 2g5c_A Prephenate dehydrogenas 83.1 12 0.00042 28.5 10.0 89 10-116 3-95 (281)
445 4da9_A Short-chain dehydrogena 83.0 7.6 0.00026 29.8 8.7 73 10-83 31-117 (280)
446 2vn8_A Reticulon-4-interacting 83.0 2.7 9.2E-05 33.9 6.3 94 7-117 183-280 (375)
447 1xq1_A Putative tropinone redu 82.9 7.2 0.00025 29.4 8.5 73 9-83 15-102 (266)
448 1qsg_A Enoyl-[acyl-carrier-pro 82.9 13 0.00045 28.0 10.0 105 9-117 10-148 (265)
449 3f1l_A Uncharacterized oxidore 82.9 13 0.00044 27.9 10.0 74 9-83 13-102 (252)
450 4imr_A 3-oxoacyl-(acyl-carrier 82.3 6.6 0.00022 30.1 8.1 73 10-83 35-119 (275)
451 3dqp_A Oxidoreductase YLBE; al 82.1 12 0.00042 27.1 10.8 97 10-117 2-105 (219)
452 2pd4_A Enoyl-[acyl-carrier-pro 82.1 4.5 0.00015 30.9 7.1 106 9-118 7-145 (275)
453 3zwc_A Peroxisomal bifunctiona 81.9 28 0.00096 31.1 13.3 99 9-122 317-434 (742)
454 3iht_A S-adenosyl-L-methionine 81.9 2.1 7.2E-05 30.5 4.5 95 8-115 41-145 (174)
455 1pjc_A Protein (L-alanine dehy 81.8 0.52 1.8E-05 38.2 1.6 100 9-119 168-269 (361)
456 3r6d_A NAD-dependent epimerase 81.6 13 0.00044 27.0 9.3 69 11-83 8-83 (221)
457 3gqv_A Enoyl reductase; medium 81.6 4.8 0.00017 32.4 7.4 93 7-117 164-263 (371)
458 3k6j_A Protein F01G10.3, confi 80.8 24 0.00081 29.6 11.4 98 9-121 55-170 (460)
459 3rd5_A Mypaa.01249.C; ssgcid, 80.7 8.2 0.00028 29.7 8.2 70 9-83 17-96 (291)
460 1mv8_A GMD, GDP-mannose 6-dehy 80.7 7.2 0.00025 32.2 8.3 101 10-116 2-122 (436)
461 3asu_A Short-chain dehydrogena 80.6 16 0.00054 27.4 11.3 70 11-83 3-84 (248)
462 4f6c_A AUSA reductase domain p 80.6 10 0.00034 31.0 9.1 73 9-83 70-160 (427)
463 1f0y_A HCDH, L-3-hydroxyacyl-C 80.5 7.5 0.00026 30.2 7.9 92 9-114 16-133 (302)
464 2vhw_A Alanine dehydrogenase; 80.3 0.68 2.3E-05 37.8 1.8 99 8-117 168-268 (377)
465 3hwr_A 2-dehydropantoate 2-red 80.1 15 0.00052 28.8 9.7 98 8-119 19-122 (318)
466 2zwa_A Leucine carboxyl methyl 80.0 8.6 0.00029 33.9 8.9 107 7-121 107-258 (695)
467 2cvz_A Dehydrogenase, 3-hydrox 79.9 12 0.0004 28.7 8.8 91 9-121 2-94 (289)
468 3nzo_A UDP-N-acetylglucosamine 79.7 4.7 0.00016 32.9 6.7 77 9-86 36-125 (399)
469 3imf_A Short chain dehydrogena 79.3 8.6 0.00029 29.0 7.8 74 9-83 7-93 (257)
470 3gpi_A NAD-dependent epimerase 79.0 6.5 0.00022 30.0 7.1 63 8-82 3-72 (286)
471 1g0o_A Trihydroxynaphthalene r 79.0 8.8 0.0003 29.4 7.8 106 10-117 31-163 (283)
472 3b1f_A Putative prephenate deh 78.9 18 0.0006 27.8 9.6 88 9-114 7-98 (290)
473 1cyd_A Carbonyl reductase; sho 78.9 17 0.00058 26.8 11.5 70 9-83 8-86 (244)
474 3ce6_A Adenosylhomocysteinase; 78.8 3.7 0.00013 34.8 5.9 88 8-119 274-363 (494)
475 3u5t_A 3-oxoacyl-[acyl-carrier 78.4 5.3 0.00018 30.5 6.3 107 10-117 29-161 (267)
476 3abi_A Putative uncharacterize 78.4 5.6 0.00019 32.0 6.7 67 8-81 16-85 (365)
477 4e21_A 6-phosphogluconate dehy 78.3 3.7 0.00013 33.2 5.6 97 8-122 22-120 (358)
478 2p91_A Enoyl-[acyl-carrier-pro 78.2 13 0.00043 28.5 8.6 106 9-118 22-161 (285)
479 4fs3_A Enoyl-[acyl-carrier-pro 78.2 9.7 0.00033 28.8 7.8 107 10-117 8-146 (256)
480 2h7i_A Enoyl-[acyl-carrier-pro 78.1 5.4 0.00018 30.4 6.3 107 9-118 8-149 (269)
481 3tri_A Pyrroline-5-carboxylate 77.9 17 0.00058 28.0 9.2 89 8-115 3-96 (280)
482 2wtb_A MFP2, fatty acid multif 77.8 32 0.0011 30.6 11.8 92 9-115 313-425 (725)
483 3rku_A Oxidoreductase YMR226C; 77.6 22 0.00076 27.3 9.9 75 9-83 34-125 (287)
484 3g79_A NDP-N-acetyl-D-galactos 77.5 26 0.0009 29.5 10.7 109 8-122 18-152 (478)
485 3i83_A 2-dehydropantoate 2-red 77.4 8.4 0.00029 30.3 7.4 97 9-118 3-106 (320)
486 3k96_A Glycerol-3-phosphate de 77.3 12 0.0004 30.2 8.3 93 8-116 29-132 (356)
487 2h78_A Hibadh, 3-hydroxyisobut 77.3 8.3 0.00028 29.9 7.3 94 9-122 4-102 (302)
488 3ic5_A Putative saccharopine d 77.1 12 0.0004 23.9 8.1 67 9-82 6-78 (118)
489 3pi7_A NADH oxidoreductase; gr 76.9 5.7 0.00019 31.6 6.3 80 19-117 178-263 (349)
490 4dll_A 2-hydroxy-3-oxopropiona 76.8 13 0.00043 29.3 8.3 95 8-122 31-129 (320)
491 3o38_A Short chain dehydrogena 76.8 11 0.00038 28.4 7.8 74 9-83 23-111 (266)
492 3gaz_A Alcohol dehydrogenase s 76.5 3.7 0.00013 32.7 5.1 89 8-117 151-246 (343)
493 3ucx_A Short chain dehydrogena 76.3 11 0.00036 28.6 7.5 74 9-83 12-98 (264)
494 3qiv_A Short-chain dehydrogena 76.1 7.7 0.00026 29.0 6.6 74 9-83 10-96 (253)
495 3hn2_A 2-dehydropantoate 2-red 75.7 7.9 0.00027 30.3 6.8 95 9-117 3-103 (312)
496 1xu9_A Corticosteroid 11-beta- 75.4 5.7 0.0002 30.5 5.8 71 9-80 29-113 (286)
497 1zk4_A R-specific alcohol dehy 75.3 13 0.00046 27.5 7.8 73 9-83 7-92 (251)
498 1wg8_A Predicted S-adenosylmet 74.9 1.9 6.6E-05 33.7 2.9 27 94-120 210-236 (285)
499 3gt0_A Pyrroline-5-carboxylate 74.6 4.5 0.00016 30.5 5.0 87 9-114 3-94 (247)
500 3rc1_A Sugar 3-ketoreductase; 74.4 13 0.00045 29.6 7.9 67 7-80 26-96 (350)
No 1
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.87 E-value=8.3e-21 Score=145.03 Aligned_cols=131 Identities=33% Similarity=0.602 Sum_probs=110.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...+|||+|||+|.++..+++.+..+++++|+|+.+++.++++....+++++.++|+.+++ +++++||+|+++.+++++
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~v~~~~~~~~~ 120 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLD-FPSASFDVVLEKGTLDAL 120 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCC-SCSSCEEEEEEESHHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCC-CCCCcccEEEECcchhhh
Confidence 4468999999999999999998765899999999999999999876678999999999988 888999999999999887
Q ss_pred ccCCC--------chHHHHHHHHHHHHhccCCcEEEEEEcCCchhhHhhhcccccceEEE
Q 028385 87 MCGTN--------APISASQMLGEVSRLLKPGGIYMLITYGDPKARMIHLKWKVYNWKIE 138 (210)
Q Consensus 87 ~~~~~--------~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~~~~~~~~~~~~~~~~~ 138 (210)
.+... ...+..++++++.++|||||.+++.++..+......+....+.|...
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~ 180 (215)
T 2pxx_A 121 LAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPHFRTRHYAQAYYGWSLR 180 (215)
T ss_dssp TTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHHHHHHHHCCGGGCEEEE
T ss_pred ccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcHHHHHHHhccccCcEEE
Confidence 32211 13578999999999999999999999988877766665555667764
No 2
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.86 E-value=1.8e-21 Score=148.47 Aligned_cols=104 Identities=15% Similarity=0.150 Sum_probs=90.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--------------CCCcEEEEcccCCCCCCCC-
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--------------IPQLKYLQMDVRDMSFFED- 71 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--------------~~~v~~~~~d~~~~~~~~~- 71 (210)
...+|||+|||+|..+..+++.+. +|+|+|+|+.|++.|+++... ..+++++++|+.+++ +.+
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~-~~~~ 99 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT-ARDI 99 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST-HHHH
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCC-cccC
Confidence 446899999999999999999877 899999999999999988642 368999999999988 665
Q ss_pred CcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 72 ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 72 ~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
++||+|++..+++|+ +..+..+++++++|+|||||+++++.
T Consensus 100 ~~fD~v~~~~~l~~l-----~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 100 GHCAAFYDRAAMIAL-----PADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp HSEEEEEEESCGGGS-----CHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred CCEEEEEECcchhhC-----CHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 799999999999998 55677889999999999999855554
No 3
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.85 E-value=1.6e-21 Score=153.86 Aligned_cols=100 Identities=18% Similarity=0.248 Sum_probs=89.8
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchhc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLM 87 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~~ 87 (210)
..+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++ .++++++++|+++++ +++++||+|++..++||+
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~----~~~v~~~~~~~e~~~-~~~~sfD~v~~~~~~h~~- 112 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALR----HPRVTYAVAPAEDTG-LPPASVDVAIAAQAMHWF- 112 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCC----CTTEEEEECCTTCCC-CCSSCEEEEEECSCCTTC-
T ss_pred CCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhh----cCCceeehhhhhhhc-ccCCcccEEEEeeehhHh-
Confidence 46899999999999999998875 89999999999987754 378999999999999 999999999999999887
Q ss_pred cCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 88 CGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 88 ~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
+..+++++++|+|||||.+++..++.+
T Consensus 113 -------~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 113 -------DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp -------CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred -------hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 356899999999999999999887654
No 4
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.85 E-value=1.2e-20 Score=149.38 Aligned_cols=106 Identities=19% Similarity=0.244 Sum_probs=91.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHc---CCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEEC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD---GYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDK 80 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~ 80 (210)
...+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|+++.+.. .+++++++|+.+++ + +.||+|++.
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~-~--~~~d~v~~~ 146 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA-I--ENASMVVLN 146 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC-C--CSEEEEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc-c--cccccceee
Confidence 3468999999999999999886 2348999999999999999987543 57999999999887 5 469999999
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
.++||+ +..+...++++++|+|||||.+++.+...
T Consensus 147 ~~l~~~-----~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 147 FTLQFL-----EPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp SCGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred eeeeec-----CchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 999998 55677889999999999999999987654
No 5
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.84 E-value=1.1e-20 Score=148.69 Aligned_cols=104 Identities=14% Similarity=0.206 Sum_probs=91.2
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc-------------------CCCCcEEEEcccCCCC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE-------------------EIPQLKYLQMDVRDMS 67 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-------------------~~~~v~~~~~d~~~~~ 67 (210)
...+|||+|||+|..+..+++.|. +|+|+|+|+.|++.|+++.. ...+++|+++|+.+++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 446899999999999999999987 89999999999999987763 2367999999999988
Q ss_pred CCCC-CcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 68 FFED-ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 68 ~~~~-~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+.+ ++||+|++..+++++ +..+...+++++.++|||||++++++
T Consensus 147 -~~~~~~FD~V~~~~~l~~l-----~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 147 -RANIGKFDRIWDRGALVAI-----NPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp -GGCCCCEEEEEESSSTTTS-----CGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -cccCCCEEEEEEhhhhhhC-----CHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 554 899999999999998 55678899999999999999997654
No 6
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.82 E-value=6e-20 Score=144.75 Aligned_cols=104 Identities=21% Similarity=0.313 Sum_probs=93.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
...+|||+|||+|.++..+++.+. +++++|+|+.|++.++++.. ..+++.++++|+.+++ +++++||+|++..+++
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~-~~~~~fD~V~~~~~l~ 114 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-FTDERFHIVTCRIAAH 114 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-SCTTCEEEEEEESCGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC-CCCCCEEEEEEhhhhH
Confidence 456899999999999999988865 99999999999999998873 2367999999999998 8999999999999999
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
|+ .+...+++++.++|||||.+++.+..
T Consensus 115 ~~-------~d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 115 HF-------PNPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp GC-------SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hc-------CCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 99 78899999999999999999987644
No 7
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.81 E-value=1.3e-19 Score=142.27 Aligned_cols=103 Identities=17% Similarity=0.223 Sum_probs=94.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...+|||+|||+|.++..+++.+..+++++|+|+.+++.++++.. ..++.+.++|+.+++ +++++||+|++..+++|+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~ 121 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT-SPVVCYEQKAIEDIA-IEPDAYNVVLSSLALHYI 121 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC-CTTEEEEECCGGGCC-CCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc-cCCeEEEEcchhhCC-CCCCCeEEEEEchhhhhh
Confidence 557899999999999999999876689999999999999999876 468999999999998 889999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
.+..+++++++++|||||.+++...
T Consensus 122 -------~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 122 -------ASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp -------SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------hhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 8899999999999999999988653
No 8
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.81 E-value=9.3e-20 Score=138.43 Aligned_cols=103 Identities=10% Similarity=0.158 Sum_probs=94.0
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchhc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLM 87 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~~ 87 (210)
..+|||+|||+|.++..+++.+. +++|+|+|+.|++.++++. +++.++++|+.+++ +++++||+|++..+++|+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~---~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~- 115 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH---PSVTFHHGTITDLS-DSPKRWAGLLAWYSLIHM- 115 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC---TTSEEECCCGGGGG-GSCCCEEEEEEESSSTTC-
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC---CCCeEEeCcccccc-cCCCCeEEEEehhhHhcC-
Confidence 56899999999999999999866 8999999999999999885 67999999999988 888999999999999998
Q ss_pred cCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 88 CGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 88 ~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+..+...+++++.++|||||.+++..+..
T Consensus 116 ----~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 116 ----GPGELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp ----CTTTHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred ----CHHHHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 44589999999999999999999887654
No 9
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.81 E-value=4.2e-19 Score=136.23 Aligned_cols=106 Identities=14% Similarity=0.158 Sum_probs=94.7
Q ss_pred CCCCEEEeCCCCchhHHHHHHcC--CCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDG--YEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
...+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++.. ..+++++.++|+.+++ +++++||+|++..+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~ 115 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP-LPDNTVDFIFMAFT 115 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS-SCSSCEEEEEEESC
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC-CCCCCeeEEEeehh
Confidence 45689999999999999998874 3589999999999999999873 3357999999999988 88999999999999
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
++|+ .+...+++++.++|||||.+++.++..
T Consensus 116 l~~~-------~~~~~~l~~~~~~LkpgG~l~i~~~~~ 146 (219)
T 3dh0_A 116 FHEL-------SEPLKFLEELKRVAKPFAYLAIIDWKK 146 (219)
T ss_dssp GGGC-------SSHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred hhhc-------CCHHHHHHHHHHHhCCCeEEEEEEecc
Confidence 9999 788999999999999999999987654
No 10
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.81 E-value=2e-19 Score=141.76 Aligned_cols=108 Identities=14% Similarity=0.188 Sum_probs=97.3
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
....+|||+|||+|.++..+++....+|+++|+|+.+++.++++....++++++++|+.+++ +++++||+|++..+++|
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~ 132 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKE-FPENNFDLIYSRDAILA 132 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCC-CCTTCEEEEEEESCGGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCC-CCCCcEEEEeHHHHHHh
Confidence 34568999999999999999987233899999999999999999866578999999999998 88999999999999999
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+ +..+...+++++.++|||||.+++.++.
T Consensus 133 ~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 133 L-----SLENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp S-----CHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred c-----ChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 8 6789999999999999999999998754
No 11
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.81 E-value=3.5e-19 Score=138.11 Aligned_cols=109 Identities=18% Similarity=0.296 Sum_probs=95.3
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
....+|||+|||+|.++..+++. +..+++++|+|+.+++.++++.....++.++++|+.+++ ++ ++||+|++..+++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~-~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYD-FE-EKYDMVVSALSIH 120 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCC-CC-SCEEEEEEESCGG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccC-CC-CCceEEEEeCccc
Confidence 44578999999999999999987 245899999999999999999876668999999999988 66 8999999999999
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
|+ +......++++++++|||||.+++.+...+
T Consensus 121 ~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 121 HL-----EDEDKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp GS-----CHHHHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred cC-----CHHHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 99 444556799999999999999999886543
No 12
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.80 E-value=2.2e-19 Score=140.68 Aligned_cols=107 Identities=12% Similarity=0.181 Sum_probs=96.2
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
....+|||+|||+|.++..+++.+..+++++|+|+.+++.++++....++++++++|+.+++ +++++||+|++..+++|
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~ 170 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETAT-LPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCC-CCSSCEEEEEEESCGGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCC-CCCCCeEEEEEcchhhh
Confidence 34578999999999999999887665799999999999999999866578999999999988 88899999999999999
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
+ +..+...+++++.++|||||.+++.+.
T Consensus 171 ~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 171 L-----TDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp S-----CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-----CHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 8 556789999999999999999998874
No 13
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.80 E-value=2.7e-19 Score=139.43 Aligned_cols=102 Identities=14% Similarity=0.213 Sum_probs=91.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...+|||||||+|.++..+++.+. +++|+|+|+.+++.|+++... +++++++|+.++. ++++||+|++.++++|+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~--~v~~~~~d~~~~~--~~~~fD~v~~~~~l~~~ 116 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD--GITYIHSRFEDAQ--LPRRYDNIVLTHVLEHI 116 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS--CEEEEESCGGGCC--CSSCEEEEEEESCGGGC
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC--CeEEEEccHHHcC--cCCcccEEEEhhHHHhh
Confidence 446899999999999999988766 899999999999999998754 7999999998873 67899999999999999
Q ss_pred ccCCCchHHHHHHHHHHH-HhccCCcEEEEEEcCC
Q 028385 87 MCGTNAPISASQMLGEVS-RLLKPGGIYMLITYGD 120 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~-r~LkpgG~~~~~~~~~ 120 (210)
.+...++++++ ++|||||.+++.....
T Consensus 117 -------~~~~~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 117 -------DDPVALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp -------SSHHHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred -------cCHHHHHHHHHHHhcCCCCEEEEEcCCh
Confidence 78899999999 9999999999887543
No 14
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.80 E-value=3.5e-19 Score=138.85 Aligned_cols=106 Identities=14% Similarity=0.221 Sum_probs=94.8
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
....+|||+|||+|.++..+++.+. +++++|+|+.+++.++++.. ..+++.+.++|+.+++ +++++||+|++..++
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~l 97 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-FPDDSFDIITCRYAA 97 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-SCTTCEEEEEEESCG
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC-CCCCcEEEEEECCch
Confidence 3456899999999999999988765 89999999999999998863 3367999999999998 889999999999999
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+|+ .+...+++++.++|||||.+++.+...
T Consensus 98 ~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 98 HHF-------SDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp GGC-------SCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred hhc-------cCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 999 788999999999999999999987653
No 15
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.79 E-value=7.3e-19 Score=134.99 Aligned_cols=103 Identities=14% Similarity=0.152 Sum_probs=90.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...+|||+|||+|.++..+++.+. +++++|+|+.+++.++++.. .++++.++|+.+++ ++ ++||+|++..+++|+
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~--~~~~~~~~d~~~~~-~~-~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP--KEFSITEGDFLSFE-VP-TSIDTIVSTYAFHHL 119 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC--TTCCEESCCSSSCC-CC-SCCSEEEEESCGGGS
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC--CceEEEeCChhhcC-CC-CCeEEEEECcchhcC
Confidence 456899999999999999999865 89999999999999999875 57999999999988 77 999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+......+++++.++|||||.+++.+..
T Consensus 120 -----~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 120 -----TDDEKNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp -----CHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred -----ChHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 3333344999999999999999998744
No 16
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.79 E-value=6.7e-19 Score=139.33 Aligned_cols=104 Identities=15% Similarity=0.190 Sum_probs=93.0
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
....+|||||||+|.++..+++.+..+|+|+|+|+.+++.++++.+.. ++++++++|+.+++ +++++||+|++..+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP-FRNEELDLIWSEGA 123 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-CCTTCEEEEEESSC
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC-CCCCCEEEEEEcCC
Confidence 445689999999999999999986669999999999999999987432 56999999999988 88999999999999
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
++|+ +...+++++.++|||||.+++.+.
T Consensus 124 ~~~~--------~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 124 IYNI--------GFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp GGGT--------CHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ceec--------CHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9987 368899999999999999998875
No 17
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.79 E-value=4.8e-19 Score=137.83 Aligned_cols=104 Identities=25% Similarity=0.392 Sum_probs=94.2
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...+|||+|||+|.++..+++.+. +++++|+|+.+++.++++.. ..+++++++|+.+++ +++++||+|++..+++|+
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~ 129 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGE-GPDLSFIKGDLSSLP-FENEQFEAIMAINSLEWT 129 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTC-BTTEEEEECBTTBCS-SCTTCEEEEEEESCTTSS
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhcc-cCCceEEEcchhcCC-CCCCCccEEEEcChHhhc
Confidence 346899999999999999999866 89999999999999998852 368999999999998 889999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
.+...+++++.++|||||.+++..+..
T Consensus 130 -------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 130 -------EEPLRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp -------SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred -------cCHHHHHHHHHHHhCCCeEEEEEEcCC
Confidence 888999999999999999999887543
No 18
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.79 E-value=3.3e-19 Score=136.63 Aligned_cols=107 Identities=15% Similarity=0.221 Sum_probs=93.2
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
....+|||+|||+|.++..+++.+. +++++|+|+.+++.++++....++++++++|+.+++ ++++||+|++..+++|
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~--~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS--TAELFDLIVVAEVLYY 126 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC--CSCCEEEEEEESCGGG
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC--CCCCccEEEEccHHHh
Confidence 3456899999999999999998865 899999999999999999877678999999999986 5789999999999999
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+ .......++++++.++|||||.+++.+..
T Consensus 127 ~----~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 127 L----EDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp S----SSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred C----CCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 8 11244578899999999999999887644
No 19
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.79 E-value=4e-19 Score=135.91 Aligned_cols=104 Identities=17% Similarity=0.195 Sum_probs=93.5
Q ss_pred CEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 10 DTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 10 ~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
+|||+|||+|.++..+++.+..+++++|+|+.+++.|+++.... ++++++++|+.+++ +++++||+|++..+++|+
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~l~~~ 124 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP-IEDNYADLIVSRGSVFFW 124 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS-SCTTCEEEEEEESCGGGC
T ss_pred EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC-CCcccccEEEECchHhhc
Confidence 89999999999999999874458999999999999999987432 57999999999998 889999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
.+...++++++++|||||.+++.+...+
T Consensus 125 -------~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 152 (219)
T 3dlc_A 125 -------EDVATAFREIYRILKSGGKTYIGGGFGN 152 (219)
T ss_dssp -------SCHHHHHHHHHHHEEEEEEEEEEECCSS
T ss_pred -------cCHHHHHHHHHHhCCCCCEEEEEeccCc
Confidence 8899999999999999999988865443
No 20
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.79 E-value=6.5e-19 Score=138.64 Aligned_cols=103 Identities=19% Similarity=0.276 Sum_probs=92.9
Q ss_pred CCCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 5 STGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 5 ~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
.....+|||+|||+|.++..+++.+. +++++|+|+.+++.++++... .+++.+.++|+.+++ +++++||+|++..++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP-LPDESVHGVIVVHLW 114 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC-SCTTCEEEEEEESCG
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC-CCCCCeeEEEECCch
Confidence 34556899999999999999998864 899999999999999998732 368999999999988 889999999999999
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
||+ .+...+++++.++|||||.+++.
T Consensus 115 ~~~-------~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 115 HLV-------PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGC-------TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhc-------CCHHHHHHHHHHHCCCCcEEEEE
Confidence 999 78899999999999999999877
No 21
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.79 E-value=1.7e-18 Score=132.93 Aligned_cols=105 Identities=12% Similarity=0.182 Sum_probs=90.4
Q ss_pred CCCCEEEeCCCCchhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC-------CCcEEEEcccCCCCCCCCCcccEEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI-------PQLKYLQMDVRDMSFFEDESFDAVI 78 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-------~~v~~~~~d~~~~~~~~~~~fD~Vi 78 (210)
...+|||+|||+|.++..+++.+ ..+++++|+|+.+++.++++.... +++++.++|+...+ .++++||+|+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~ 107 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD-KRFHGYDAAT 107 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC-GGGCSCSEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc-ccCCCcCEEe
Confidence 34689999999999999999874 358999999999999999987533 27999999998776 6778999999
Q ss_pred ECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 79 DKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+..+++|+ +.++..++++++.++|||||.+++..
T Consensus 108 ~~~~l~~~-----~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 108 VIEVIEHL-----DLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp EESCGGGC-----CHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred eHHHHHcC-----CHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 99999999 44567999999999999999776554
No 22
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.78 E-value=4.5e-19 Score=139.21 Aligned_cols=104 Identities=19% Similarity=0.123 Sum_probs=91.6
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
....+|||+|||+|.++..+++....+++++|+|+.+++.++++.... +++.++++|+.+++ + +++||+|++..+
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-~-~~~fD~V~~~~~ 112 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV-A-NEKCDVAACVGA 112 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC-C-SSCEEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC-c-CCCCCEEEECCC
Confidence 345689999999999999998874348999999999999999887432 47999999999988 6 889999999999
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
++|+ .+..+++++++++|||||.+++.+.
T Consensus 113 ~~~~-------~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 113 TWIA-------GGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp GGGT-------SSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred hHhc-------CCHHHHHHHHHHHcCCCeEEEEecC
Confidence 9998 7889999999999999999988763
No 23
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.78 E-value=6.3e-19 Score=134.23 Aligned_cols=109 Identities=24% Similarity=0.316 Sum_probs=92.8
Q ss_pred CCCCEEEeCCCCchhHH-HHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 7 GTRDTCRRAAPSIVMSE-DMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~-~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
...+|||+|||+|.++. .+.+.+. +++++|+|+.+++.++++... ..++++.++|+.+++ +++++||+|++..+++
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP-FKDESMSFVYSYGTIF 100 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC-SCTTCEEEEEECSCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCC-CCCCceeEEEEcChHH
Confidence 34689999999999854 4444454 899999999999999988642 257899999999988 8889999999999999
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
|+ +..+..+++++++++|||||.+++.+++.+.
T Consensus 101 ~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 133 (209)
T 2p8j_A 101 HM-----RKNDVKEAIDEIKRVLKPGGLACINFLTTKD 133 (209)
T ss_dssp GS-----CHHHHHHHHHHHHHHEEEEEEEEEEEEETTS
T ss_pred hC-----CHHHHHHHHHHHHHHcCCCcEEEEEEecccc
Confidence 98 5678999999999999999999998876544
No 24
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.78 E-value=6.6e-19 Score=139.60 Aligned_cols=106 Identities=20% Similarity=0.297 Sum_probs=94.0
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
....+|||+|||+|.++..+++....+|+++|+|+.+++.++++... . +++.++++|+.+++ +++++||+|++..+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~ 138 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP-FEDASFDAVWALES 138 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-SCTTCEEEEEEESC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-CCCCCccEEEEech
Confidence 34568999999999999999886445999999999999999988743 2 47999999999998 88999999999999
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
++|+ .+...+++++.++|||||.+++.++.
T Consensus 139 l~~~-------~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 139 LHHM-------PDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp TTTS-------SCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred hhhC-------CCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 9999 77899999999999999999988754
No 25
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.78 E-value=6.2e-19 Score=140.79 Aligned_cols=104 Identities=17% Similarity=0.296 Sum_probs=93.4
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
..+|||+|||+|.++..+++.+. +++|+|+|+.+++.|+++.... ++++++++|+.+++.+.+++||+|++..+++
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 147 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLE 147 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGG
T ss_pred CCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhh
Confidence 46899999999999999999865 8999999999999999987543 5799999999987646788999999999999
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
|+ .+...+++++.++|||||.+++..+.
T Consensus 148 ~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 148 WV-------ADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp GC-------SCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred cc-------cCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 99 78899999999999999999988754
No 26
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.78 E-value=1.3e-18 Score=135.38 Aligned_cols=103 Identities=16% Similarity=0.244 Sum_probs=93.4
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...+|||+|||+|.++..+++.+..+++++|+|+.+++.++++... .++++.++|+.+++ +++++||+|++..+++|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~ 120 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD-TGITYERADLDKLH-LPQDSFDLAYSSLALHYV 120 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS-SSEEEEECCGGGCC-CCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc-CCceEEEcChhhcc-CCCCCceEEEEecccccc
Confidence 4568999999999999999988665899999999999999988754 47999999999988 888999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
.+...+++++.++|||||.+++...
T Consensus 121 -------~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 121 -------EDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp -------SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------chHHHHHHHHHHhcCcCcEEEEEeC
Confidence 7889999999999999999988764
No 27
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.78 E-value=4e-18 Score=125.82 Aligned_cols=99 Identities=17% Similarity=0.248 Sum_probs=89.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...+|||+|||+|.++..+++.+. +++++|+++.+++.++++. +++++..+| .+ +++++||+|++..+++|+
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~---~~v~~~~~d---~~-~~~~~~D~v~~~~~l~~~ 88 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKF---DSVITLSDP---KE-IPDNSVDFILFANSFHDM 88 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHC---TTSEEESSG---GG-SCTTCEEEEEEESCSTTC
T ss_pred CCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhC---CCcEEEeCC---CC-CCCCceEEEEEccchhcc
Confidence 446899999999999999998875 9999999999999999983 789999999 56 778999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
.+...+++++.++|||||.+++.++..
T Consensus 89 -------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 89 -------DDKQHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp -------SCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred -------cCHHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 788999999999999999999987654
No 28
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.78 E-value=1.6e-18 Score=133.15 Aligned_cols=105 Identities=11% Similarity=0.126 Sum_probs=89.9
Q ss_pred CCCCEEEeCCCCchhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC-------CCcEEEEcccCCCCCCCCCcccEEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI-------PQLKYLQMDVRDMSFFEDESFDAVI 78 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-------~~v~~~~~d~~~~~~~~~~~fD~Vi 78 (210)
...+|||+|||+|.++..+++.+ ..+++|+|+|+.+++.++++.... ++++++++|+...+ +++++||+|+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~ 107 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD-KRFSGYDAAT 107 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC-GGGTTCSEEE
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc-cccCCCCEEE
Confidence 34689999999999999999874 358999999999999999987432 27999999998777 7788999999
Q ss_pred ECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 79 DKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+..+++|+ +.++..++++++.++|||||.+++..
T Consensus 108 ~~~~l~~~-----~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 108 VIEVIEHL-----DENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp EESCGGGC-----CHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EHHHHHhC-----CHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 99999999 44566899999999999999765543
No 29
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.78 E-value=1.1e-18 Score=137.03 Aligned_cols=104 Identities=15% Similarity=0.198 Sum_probs=91.7
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
....+|||+|||+|.++..+++....+|+|+|+|+.+++.++++.... ++++++++|+.+++ +++++||+|++..+
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP-FQNEELDLIWSEGA 123 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS-SCTTCEEEEEEESC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-CCCCCEEEEEecCh
Confidence 344689999999999999999985559999999999999999987432 35999999999998 88999999999999
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
++|+ +...+++++.++|||||++++.+.
T Consensus 124 l~~~--------~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 124 IYNI--------GFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp SCCC--------CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred Hhhc--------CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 9987 367899999999999999999874
No 30
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.78 E-value=2.6e-18 Score=129.69 Aligned_cols=105 Identities=18% Similarity=0.288 Sum_probs=92.4
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
...+|||+|||+|.++..+++.+. +++++|+|+.+++.++++.. ..+++++.++|+.+++ + +++||+|++..+++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~-~~~~D~v~~~~~l~ 108 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLT-F-DRQYDFILSTVVLM 108 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCC-C-CCCEEEEEEESCGG
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCC-C-CCCceEEEEcchhh
Confidence 446899999999999999999865 89999999999999998863 3357999999999988 6 88999999999999
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
|+ +..+...+++++.++|||||.+++++..
T Consensus 109 ~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 109 FL-----EAKTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp GS-----CGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred hC-----CHHHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 98 4458899999999999999998887643
No 31
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.78 E-value=2.3e-18 Score=131.75 Aligned_cols=107 Identities=17% Similarity=0.153 Sum_probs=93.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...+|||+|||+|.++..+++.+. +++++|+|+.+++.+++ ...++++++++|+.++ +++++||+|++..+++|+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~--~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~l~~~ 120 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR--HGLDNVEFRQQDLFDW--TPDRQWDAVFFAHWLAHV 120 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG--GCCTTEEEEECCTTSC--CCSSCEEEEEEESCGGGS
T ss_pred CCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh--cCCCCeEEEecccccC--CCCCceeEEEEechhhcC
Confidence 345899999999999999998865 89999999999999988 3336899999999886 578899999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCchh
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKA 123 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~~ 123 (210)
+.+....+++++.++|||||.+++.+...+..
T Consensus 121 -----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 152 (218)
T 3ou2_A 121 -----PDDRFEAFWESVRSAVAPGGVVEFVDVTDHER 152 (218)
T ss_dssp -----CHHHHHHHHHHHHHHEEEEEEEEEEEECCCC-
T ss_pred -----CHHHHHHHHHHHHHHcCCCeEEEEEeCCCCcc
Confidence 44446999999999999999999998876543
No 32
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.78 E-value=4.9e-19 Score=139.81 Aligned_cols=101 Identities=16% Similarity=0.213 Sum_probs=90.6
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
....+|||+|||+|.++..+++.+. +|+|+|+|+.|++.++++. +++++++|+.+++ +++++||+|++..+++|
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~----~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~ 106 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVVHP----QVEWFTGYAENLA-LPDKSVDGVISILAIHH 106 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCCCT----TEEEECCCTTSCC-SCTTCBSEEEEESCGGG
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcc----CCEEEECchhhCC-CCCCCEeEEEEcchHhh
Confidence 3456899999999999999998654 9999999999998876553 8999999999998 88999999999999999
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+ .+...++++++++|| ||++++.++..
T Consensus 107 ~-------~~~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 107 F-------SHLEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp C-------SSHHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred c-------cCHHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 9 889999999999999 99888888753
No 33
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.78 E-value=1.1e-18 Score=136.03 Aligned_cols=107 Identities=17% Similarity=0.201 Sum_probs=93.3
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
...+|||+|||+|.++..+++.+..+++++|+|+.+++.|+++.... .++.++++|+.+++ +++++||+|++..+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT-PEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC-CCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC-CCCCCEEEEEEcchhh
Confidence 35689999999999999988876668999999999999999987542 46899999999988 7788999999999999
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
|+ +.+....+++++.++|||||.+++.+..
T Consensus 158 ~~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 158 HL-----TDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp GS-----CHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hC-----CHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 98 3344679999999999999999987754
No 34
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.77 E-value=1.6e-17 Score=124.60 Aligned_cols=104 Identities=16% Similarity=0.256 Sum_probs=91.7
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEEC-Cccch
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDK-GTLDS 85 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~-~~l~~ 85 (210)
...+|||+|||+|.++..+++.+. +++++|+++.+++.++++. +++.+.++|+.+.+ +++++||+|++. .+++|
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~---~~~~~~~~d~~~~~-~~~~~~D~i~~~~~~~~~ 120 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDF---PEARWVVGDLSVDQ-ISETDFDLIVSAGNVMGF 120 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC---TTSEEEECCTTTSC-CCCCCEEEEEECCCCGGG
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhC---CCCcEEEcccccCC-CCCCceeEEEECCcHHhh
Confidence 346899999999999999999865 8999999999999999887 56899999999988 788899999998 67887
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+ +.++...+++++.++|||||.+++.....
T Consensus 121 ~-----~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 121 L-----AEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp S-----CHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred c-----ChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 7 55678999999999999999998876543
No 35
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.77 E-value=8.4e-19 Score=140.73 Aligned_cols=105 Identities=15% Similarity=0.161 Sum_probs=93.9
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
....+|||+|||+|.++..+++. +. +++++|+|+.+++.++++... . ++++++++|+.+++ +++++||+|++..
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~ 158 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-CEDNSYDFIWSQD 158 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-SCTTCEEEEEEES
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC-CCCCCEeEEEecc
Confidence 44568999999999999999987 55 899999999999999988632 2 57999999999998 8899999999999
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+++|+ .+...+++++.++|||||.+++.+..
T Consensus 159 ~l~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 159 AFLHS-------PDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp CGGGC-------SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hhhhc-------CCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 99999 77899999999999999999998754
No 36
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.77 E-value=1.4e-18 Score=132.64 Aligned_cols=101 Identities=20% Similarity=0.263 Sum_probs=91.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...+|||+|||+|.++..+ +..+++++|+|+.+++.++++. +++.++++|+.+++ +++++||+|++..+++|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~ 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA---PEATWVRAWGEALP-FPGESFDVVLLFTTLEFV 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC---TTSEEECCCTTSCC-SCSSCEEEEEEESCTTTC
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC---CCcEEEEcccccCC-CCCCcEEEEEEcChhhhc
Confidence 4568999999999999877 4448999999999999999987 67899999999998 888999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
.+..++++++.++|||||.+++.+....
T Consensus 109 -------~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 109 -------EDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp -------SCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred -------CCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 7889999999999999999999887643
No 37
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.77 E-value=1.4e-18 Score=135.36 Aligned_cols=101 Identities=17% Similarity=0.200 Sum_probs=89.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCC--CCCCCCcccEEEECCccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM--SFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~--~~~~~~~fD~Vi~~~~l~ 84 (210)
...+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++ ++++++|+.+. + +++++||+|++..+++
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~------~~~~~~d~~~~~~~-~~~~~fD~i~~~~~l~ 112 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK------FNVVKSDAIEYLKS-LPDKYLDGVMISHFVE 112 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT------SEEECSCHHHHHHT-SCTTCBSEEEEESCGG
T ss_pred CCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh------cceeeccHHHHhhh-cCCCCeeEEEECCchh
Confidence 446899999999999999998866 899999999999999865 78899998885 6 7889999999999999
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
|+ +.++...+++++.++|||||.+++.....
T Consensus 113 ~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 113 HL-----DPERLFELLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp GS-----CGGGHHHHHHHHHHHBCTTCCEEEEEECT
T ss_pred hC-----CcHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 99 44577999999999999999998877553
No 38
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.77 E-value=3.2e-18 Score=132.34 Aligned_cols=108 Identities=27% Similarity=0.429 Sum_probs=93.2
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-------CCcEEEEcccCCCCCCCCCcccEEEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-------PQLKYLQMDVRDMSFFEDESFDAVID 79 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~v~~~~~d~~~~~~~~~~~fD~Vi~ 79 (210)
...+|||+|||+|.++..+++.+. +++++|+|+.+++.++++.... .++.+.++|+..++ +++++||+|++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~ 107 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS-FHDSSFDFAVM 107 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC-SCTTCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC-CCCCceeEEEE
Confidence 446899999999999999999866 8999999999999999987543 25799999999988 88999999999
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
..+++|+ ........+++++.++|||||.+++.++..
T Consensus 108 ~~~l~~~----~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 108 QAFLTSV----PDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp ESCGGGC----CCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred cchhhcC----CCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 9999998 112334499999999999999999988764
No 39
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.77 E-value=2.5e-18 Score=136.93 Aligned_cols=101 Identities=19% Similarity=0.347 Sum_probs=90.9
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.++++. +++.+.++|+.+++ + +++||+|++..+++|+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~---~~~~~~~~d~~~~~-~-~~~fD~v~~~~~l~~~ 130 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSG-AEVLGTDNAATMIEKARQNY---PHLHFDVADARNFR-V-DKPLDAVFSNAMLHWV 130 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHC---TTSCEEECCTTTCC-C-SSCEEEEEEESCGGGC
T ss_pred CCCEEEEecCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHhhC---CCCEEEECChhhCC-c-CCCcCEEEEcchhhhC
Confidence 44689999999999999999854 48999999999999999886 67899999999988 6 6799999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
.+...++++++++|||||++++.....
T Consensus 131 -------~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 131 -------KEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp -------SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred -------cCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 788999999999999999998877653
No 40
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.77 E-value=1.3e-18 Score=135.16 Aligned_cols=104 Identities=19% Similarity=0.193 Sum_probs=91.7
Q ss_pred CCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 9 RDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++.... .+++++++|+.+++ ++++||+|++..+++|
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR--PTELFDLIFDYVFFCA 144 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC--CSSCEEEEEEESSTTT
T ss_pred CCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC--CCCCeeEEEEChhhhc
Confidence 5899999999999999987655 8999999999999999998653 46999999999876 4569999999999999
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+ +..+...+++++.++|||||.+++..+..
T Consensus 145 ~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 145 I-----EPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp S-----CGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred C-----CHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 8 44589999999999999999999887653
No 41
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.76 E-value=8.3e-19 Score=138.79 Aligned_cols=111 Identities=17% Similarity=0.165 Sum_probs=88.1
Q ss_pred CCCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC------------------------------
Q 028385 5 STGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP------------------------------ 54 (210)
Q Consensus 5 ~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~------------------------------ 54 (210)
.....+|||||||+|.++..++..+..+|+|+|+|+.|++.|+++.+..+
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 34456899999999988877777776689999999999999998753321
Q ss_pred -CcE-EEEcccCCC-CCC---CCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 55 -QLK-YLQMDVRDM-SFF---EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 55 -~v~-~~~~d~~~~-~~~---~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
++. ++++|+.+. + + ..++||+|+++.++||+.. ..++..+++++++++|||||.|++....
T Consensus 133 ~~i~~~~~~D~~~~~~-~~~~~~~~fD~V~~~~~l~~i~~---~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNP-LAPAVLPLADCVLTLLAMECACC---SLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHEEEEEECCTTSSST-TTTCCCCCEEEEEEESCHHHHCS---SHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhhheEEeccccCCCC-CCccccCCCCEeeehHHHHHhcC---CHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 133 889999884 3 3 3579999999999998511 2467889999999999999999988643
No 42
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.76 E-value=1.6e-18 Score=139.33 Aligned_cols=105 Identities=13% Similarity=0.178 Sum_probs=92.0
Q ss_pred CCCCEEEeCCCCchhHHHHHH--cCCCcEEEEeCCHHHHHHHHHhhcC----CCCcEEEEcccCCCCCCCC------Ccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVK--DGYEDIVNIDISSVAIDMMKMKYEE----IPQLKYLQMDVRDMSFFED------ESF 74 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~--~~~~~v~~vD~s~~~~~~a~~~~~~----~~~v~~~~~d~~~~~~~~~------~~f 74 (210)
...+|||+|||+|.++..+++ .+..+|+|+|+|+.+++.|+++... .++++++++|+.+++ +++ ++|
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~~~~~~f 114 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK-FLGADSVDKQKI 114 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG-GGCTTTTTSSCE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC-ccccccccCCCe
Confidence 457899999999999999996 3566999999999999999998643 378999999999988 666 899
Q ss_pred cEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 75 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 75 D~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
|+|++..++||+ +...+++++.++|||||.+++.++..
T Consensus 115 D~V~~~~~l~~~--------~~~~~l~~~~~~LkpgG~l~i~~~~~ 152 (299)
T 3g5t_A 115 DMITAVECAHWF--------DFEKFQRSAYANLRKDGTIAIWGYAD 152 (299)
T ss_dssp EEEEEESCGGGS--------CHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred eEEeHhhHHHHh--------CHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 999999999986 57899999999999999999866553
No 43
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.76 E-value=3.2e-18 Score=135.07 Aligned_cols=105 Identities=14% Similarity=0.190 Sum_probs=91.3
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECC-ccchh
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKG-TLDSL 86 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~-~l~~~ 86 (210)
..+|||+|||+|.++..+++.+. +++|+|+|+.+++.|+++. +++.++++|+.+++ + +++||+|++.. +++|+
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~---~~~~~~~~d~~~~~-~-~~~fD~v~~~~~~l~~~ 124 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRN---PDAVLHHGDMRDFS-L-GRRFSAVTCMFSSIGHL 124 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHC---TTSEEEECCTTTCC-C-SCCEEEEEECTTGGGGS
T ss_pred CCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhC---CCCEEEECChHHCC-c-cCCcCEEEEcCchhhhc
Confidence 46899999999999999998865 8999999999999999987 47999999999988 6 78999999998 99998
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
.+..+...+++++.++|||||.+++..+..+.
T Consensus 125 ----~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 156 (263)
T 3pfg_A 125 ----AGQAELDAALERFAAHVLPDGVVVVEPWWFPE 156 (263)
T ss_dssp ----CHHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred ----CCHHHHHHHHHHHHHhcCCCcEEEEEeccChh
Confidence 12247789999999999999999887654443
No 44
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.76 E-value=3.1e-18 Score=136.84 Aligned_cols=105 Identities=12% Similarity=0.143 Sum_probs=93.2
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
....+|||+|||+|.++..+++. + ..+|+|+|+|+.+++.++++.... .++++.++|+.+++ + +++||+|++..+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~-~-~~~fD~v~~~~~ 98 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-L-NDKYDIAICHAF 98 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC-C-SSCEEEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcC-c-CCCeeEEEECCh
Confidence 45578999999999999999886 3 358999999999999999988654 48999999999988 6 469999999999
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
++|+ .+...++++++++|||||++++.+..
T Consensus 99 l~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 99 LLHM-------TTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGGC-------SSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhcC-------CCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 9999 88899999999999999999988754
No 45
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.76 E-value=3.5e-18 Score=138.29 Aligned_cols=104 Identities=16% Similarity=0.169 Sum_probs=92.7
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
....+|||+|||+|.++..+++. +. +|+|+|+|+.+++.|+++.... ++++++++|+.+++ +++++||+|++..
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP-FDKGAVTASWNNE 193 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-CCTTCEEEEEEES
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC-CCCCCEeEEEECC
Confidence 34568999999999999999987 54 8999999999999999987432 47999999999998 8899999999999
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+++|+ . ...+++++.++|||||++++.+..
T Consensus 194 ~l~~~-------~-~~~~l~~~~~~LkpgG~l~~~~~~ 223 (312)
T 3vc1_A 194 STMYV-------D-LHDLFSEHSRFLKVGGRYVTITGC 223 (312)
T ss_dssp CGGGS-------C-HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred chhhC-------C-HHHHHHHHHHHcCCCcEEEEEEcc
Confidence 99998 3 899999999999999999988743
No 46
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.76 E-value=1.2e-18 Score=140.63 Aligned_cols=108 Identities=15% Similarity=0.150 Sum_probs=84.5
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC--------CcEEEEccc------CCCC-CCCCC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP--------QLKYLQMDV------RDMS-FFEDE 72 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--------~v~~~~~d~------~~~~-~~~~~ 72 (210)
..+|||||||+|..+..++..+..+|+|+|+|+.|++.|+++..... +++|.+.|+ .+++ .++++
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~ 128 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFG 128 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSS
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCC
Confidence 46899999999987777777665589999999999999999874321 256888887 3221 15678
Q ss_pred cccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 73 SFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 73 ~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+||+|+|..++|++... .+...++++++++|||||++++.+..
T Consensus 129 ~FD~V~~~~~lhy~~~~----~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 129 KFNIIDWQFAIHYSFHP----RHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp CEEEEEEESCGGGTCST----TTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CeeEEEECchHHHhCCH----HHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 99999999999875211 24579999999999999999887754
No 47
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.76 E-value=9.2e-19 Score=136.22 Aligned_cols=109 Identities=14% Similarity=0.098 Sum_probs=89.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCC--CCCCCCcccEEEE-CCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDM--SFFEDESFDAVID-KGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~--~~~~~~~fD~Vi~-~~~ 82 (210)
...+|||+|||+|.++..+++.+..+|+++|+|+.|++.|+++.... .++.++++|+.++ + +++++||+|++ .+.
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPT-LPDGHFDGILYDTYP 138 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGG-SCTTCEEEEEECCCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcc-cCCCceEEEEECCcc
Confidence 34689999999999999998766568999999999999999987543 6799999999987 7 88999999999 554
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+ +... ........++++++|+|||||++++.++.
T Consensus 139 ~-~~~~--~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 139 L-SEET--WHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp C-BGGG--TTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred c-chhh--hhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 3 2100 12356678899999999999999887654
No 48
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.76 E-value=7.1e-18 Score=132.47 Aligned_cols=102 Identities=12% Similarity=0.146 Sum_probs=91.1
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
....+|||+|||+|.++..+++. +..+++++|+|+.|++.++++. +++.+.++|+.+++ ++++||+|++..+++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---~~~~~~~~d~~~~~--~~~~fD~v~~~~~l~ 106 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---PNTNFGKADLATWK--PAQKADLLYANAVFQ 106 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS---TTSEEEECCTTTCC--CSSCEEEEEEESCGG
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---CCcEEEECChhhcC--ccCCcCEEEEeCchh
Confidence 34568999999999999999887 3458999999999999999884 68999999999876 578999999999999
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
|+ .+...++++++++|||||.+++....
T Consensus 107 ~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 107 WV-------PDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp GS-------TTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred hC-------CCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 99 88999999999999999999887753
No 49
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.76 E-value=1.8e-18 Score=143.83 Aligned_cols=105 Identities=13% Similarity=0.142 Sum_probs=92.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcC----------CCCcEEEEcccCCC------CC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEE----------IPQLKYLQMDVRDM------SF 68 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~----------~~~v~~~~~d~~~~------~~ 68 (210)
...+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+++.+. .++++|+++|+.++ +
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~- 161 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG- 161 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC-
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC-
Confidence 4568999999999999999886 345899999999999999988631 16899999999987 7
Q ss_pred CCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 69 FEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 69 ~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+++++||+|+++.+++|+ .+...++++++++|||||++++.++.
T Consensus 162 ~~~~~fD~V~~~~~l~~~-------~d~~~~l~~~~r~LkpgG~l~i~~~~ 205 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLS-------TNKLALFKEIHRVLRDGGELYFSDVY 205 (383)
T ss_dssp CCTTCEEEEEEESCGGGC-------SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhcC-------CCHHHHHHHHHHHcCCCCEEEEEEec
Confidence 889999999999999999 78899999999999999999987643
No 50
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.76 E-value=5.4e-18 Score=135.68 Aligned_cols=109 Identities=13% Similarity=0.191 Sum_probs=93.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCC-CCCcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFF-EDESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~-~~~~fD~Vi~~~~ 82 (210)
...+|||+|||+|.++..+++.+..+++|+|+|+.+++.|+++.... .++.+.++|+.+.+ + ++++||+|++..+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH-MDLGKEFDVISSQFS 142 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC-CCCSSCEEEEEEESC
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccc-cCCCCCcCEEEECch
Confidence 34689999999999999988877668999999999999999988543 46899999999987 7 6889999999999
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+||.. .+..+...+++++.++|||||.+++....
T Consensus 143 l~~~~---~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 143 FHYAF---STSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp GGGGG---SSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhhc---CCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 98721 13378999999999999999999887754
No 51
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.76 E-value=6e-18 Score=129.21 Aligned_cols=101 Identities=18% Similarity=0.188 Sum_probs=90.2
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...+|||+|||+|.++..+++.+. +++++|+|+.+++.++++. ++.+..+|+.+++ .+++||+|++..+++|+
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~----~~~~~~~d~~~~~--~~~~fD~v~~~~~l~~~ 115 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL----GRPVRTMLFHQLD--AIDAYDAVWAHACLLHV 115 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH----TSCCEECCGGGCC--CCSCEEEEEECSCGGGS
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc----CCceEEeeeccCC--CCCcEEEEEecCchhhc
Confidence 346899999999999999999866 8999999999999999986 5778899999887 67899999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+..+...+++++.++|||||.+++....
T Consensus 116 -----~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 116 -----PRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp -----CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----CHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 4558999999999999999999887643
No 52
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.76 E-value=3.2e-18 Score=135.90 Aligned_cols=105 Identities=26% Similarity=0.372 Sum_probs=93.7
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC--CCCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
....+|||||||+|.++..+++.. ..+++++|+|+.+++.++++... .+++.+.++|+.+++ +++++||+|++..+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP-FEDSSFDHIFVCFV 114 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC-SCTTCEEEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC-CCCCCeeEEEEech
Confidence 345689999999999999999873 45899999999999999998743 368999999999988 88999999999999
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
++|+ .+...+++++.++|||||.+++.+.
T Consensus 115 l~~~-------~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 115 LEHL-------QSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp GGGC-------SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhc-------CCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 9999 7888999999999999999998763
No 53
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.76 E-value=6.1e-18 Score=130.26 Aligned_cols=104 Identities=25% Similarity=0.313 Sum_probs=92.0
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCCCCCCCcccEEEECCc--cc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFFEDESFDAVIDKGT--LD 84 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~--l~ 84 (210)
..+|||+|||+|.++..+++.+. +++++|+|+.+++.++++.... ++++++++|+.+++ +++++||+|+++.+ ++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~~~~~ 116 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS-FEDKTFDYVIFIDSIVHF 116 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC-SCTTCEEEEEEESCGGGC
T ss_pred CCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCC-CCCCcEEEEEEcCchHhC
Confidence 56899999999999999998866 8999999999999999887432 68999999999988 78889999999999 55
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+. .+..++++++.++|||||.+++.+...
T Consensus 117 ~~-------~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 117 EP-------LELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp CH-------HHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CH-------HHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 55 788999999999999999998887653
No 54
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.76 E-value=5.9e-18 Score=135.16 Aligned_cols=104 Identities=13% Similarity=0.158 Sum_probs=92.2
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
...+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++.... .++++.++|+.+.+ + +++||+|++..+++|
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENLNISTALYDINAAN-I-QENYDFIVSTVVFMF 196 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCC-C-CSCEEEEEECSSGGG
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCCceEEEEecccccc-c-cCCccEEEEccchhh
Confidence 456899999999999999999876 8999999999999999987433 38999999999987 5 889999999999999
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
+ +.+....+++++.++|||||.++++..
T Consensus 197 ~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 197 L-----NRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp S-----CGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred C-----CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 8 557788999999999999999877654
No 55
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.75 E-value=4.3e-18 Score=132.87 Aligned_cols=109 Identities=11% Similarity=0.039 Sum_probs=93.7
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCC-----CcccEEEEC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFED-----ESFDAVIDK 80 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~-----~~fD~Vi~~ 80 (210)
....+|||+|||+|.++..+++.+. +|+++|+|+.|++.++++... .+++++++|+.+.+ +.. ..||+|++.
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~d~~~~~-~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTA-ANISYRLLDGLVPE-QAAQIHSEIGDANIYMR 131 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCC-TTEEEEECCTTCHH-HHHHHHHHHCSCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcc-cCceEEECcccccc-cccccccccCccEEEEc
Confidence 3456899999999999999999876 899999999999999998843 58999999998865 221 249999999
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
.++||+ +..+...+++++.++|||||.+++.++..+.
T Consensus 132 ~~~~~~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 168 (245)
T 3ggd_A 132 TGFHHI-----PVEKRELLGQSLRILLGKQGAMYLIELGTGC 168 (245)
T ss_dssp SSSTTS-----CGGGHHHHHHHHHHHHTTTCEEEEEEECTTH
T ss_pred chhhcC-----CHHHHHHHHHHHHHHcCCCCEEEEEeCCccc
Confidence 999999 4458999999999999999999999887654
No 56
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.75 E-value=8.1e-18 Score=135.27 Aligned_cols=106 Identities=17% Similarity=0.318 Sum_probs=91.7
Q ss_pred CCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-----CCcEEEEcccCCCCCCCCCcccEEEEC-Cc
Q 028385 9 RDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-----PQLKYLQMDVRDMSFFEDESFDAVIDK-GT 82 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~v~~~~~d~~~~~~~~~~~fD~Vi~~-~~ 82 (210)
.+|||||||+|.++..+++.+. +|+++|+|+.+++.|+++.... .+++++++|+.+++ + +++||+|++. .+
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~-~-~~~fD~v~~~~~~ 160 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA-L-DKRFGTVVISSGS 160 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC-C-SCCEEEEEECHHH
T ss_pred CcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC-c-CCCcCEEEECCcc
Confidence 4899999999999999999865 8999999999999999988654 57999999999988 6 7899988865 56
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
++++ +..+...+++++.++|||||.+++..+..+.
T Consensus 161 ~~~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 195 (299)
T 3g2m_A 161 INEL-----DEADRRGLYASVREHLEPGGKFLLSLAMSEA 195 (299)
T ss_dssp HTTS-----CHHHHHHHHHHHHHHEEEEEEEEEEEECCHH
T ss_pred cccC-----CHHHHHHHHHHHHHHcCCCcEEEEEeecCcc
Confidence 6666 4567899999999999999999888776544
No 57
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.74 E-value=1.7e-18 Score=134.92 Aligned_cols=103 Identities=13% Similarity=0.097 Sum_probs=86.3
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCC-CCCCCcccEEEE-----C
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMS-FFEDESFDAVID-----K 80 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~-~~~~~~fD~Vi~-----~ 80 (210)
.++|||||||+|..+..+++....+++++|+|+.+++.|+++.+.. .++.++.+|+.+.. .+++++||.|+. .
T Consensus 61 G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~ 140 (236)
T 3orh_A 61 GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLS 140 (236)
T ss_dssp CEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCB
T ss_pred CCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeecc
Confidence 4689999999999999998875558999999999999999988544 57889999987642 378899999975 3
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
..++|+ .+...++++++|+|||||+|++..
T Consensus 141 ~~~~~~-------~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 141 EETWHT-------HQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp GGGTTT-------HHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cchhhh-------cchhhhhhhhhheeCCCCEEEEEe
Confidence 444555 889999999999999999998754
No 58
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.74 E-value=1.2e-17 Score=134.11 Aligned_cols=110 Identities=16% Similarity=0.176 Sum_probs=87.9
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC--------------------------------
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI-------------------------------- 53 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-------------------------------- 53 (210)
...+|||||||+|.++..+++. +..+|+|+|+|+.|++.|+++....
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 3568999999999999999987 4559999999999999999886421
Q ss_pred ----------------------------CCcEEEEcccCCCC----CCCCCcccEEEECCccchhccCCCchHHHHHHHH
Q 028385 54 ----------------------------PQLKYLQMDVRDMS----FFEDESFDAVIDKGTLDSLMCGTNAPISASQMLG 101 (210)
Q Consensus 54 ----------------------------~~v~~~~~d~~~~~----~~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~ 101 (210)
.+++|.++|+...+ .+.+++||+|++..+++|+-. ..+..+..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl-~~~~~~~~~~l~ 204 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHL-NWGDEGLKRMFR 204 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHH-HHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhh-cCCHHHHHHHHH
Confidence 37999999997643 246789999999999977600 001128899999
Q ss_pred HHHHhccCCcEEEEEE
Q 028385 102 EVSRLLKPGGIYMLIT 117 (210)
Q Consensus 102 ~i~r~LkpgG~~~~~~ 117 (210)
+++++|||||++++..
T Consensus 205 ~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 205 RIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHEEEEEEEEEEC
T ss_pred HHHHHhCCCcEEEEec
Confidence 9999999999997753
No 59
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.74 E-value=1.4e-17 Score=124.59 Aligned_cols=112 Identities=12% Similarity=0.102 Sum_probs=85.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECC-cc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKG-TL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~-~l 83 (210)
...+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|+++.+ ..+++++++.|..+++.+.+++||+|+++. .+
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLS-KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 34689999999999999999884 489999999999999999874 336899999888875434578999998862 22
Q ss_pred chhc-cCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 84 DSLM-CGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 84 ~~~~-~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
++-. .-.........+++++.++|||||.+++..+.
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 2100 00002256778899999999999999998775
No 60
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.74 E-value=5e-18 Score=133.70 Aligned_cols=111 Identities=14% Similarity=0.170 Sum_probs=90.8
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCC------------------------------
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQ------------------------------ 55 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------------------------------ 55 (210)
....+|||+|||+|.++..+++.+..+|+++|+|+.|++.++++....+.
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 34468999999999999988877656899999999999999988765331
Q ss_pred -c-EEEEcccCCCCCCCC---CcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 56 -L-KYLQMDVRDMSFFED---ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 56 -v-~~~~~d~~~~~~~~~---~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+ .+.++|+.+...+++ ++||+|++..+++++. ....+...+++++.++|||||.+++....
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~---~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAAC---PDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC---SSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhc---CChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 7 899999988642355 8999999999999431 01278999999999999999999888743
No 61
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.73 E-value=1.4e-17 Score=126.24 Aligned_cols=102 Identities=20% Similarity=0.278 Sum_probs=88.7
Q ss_pred CEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCCCCCCCcccEEEECCccchhcc
Q 028385 10 DTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMC 88 (210)
Q Consensus 10 ~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~~~ 88 (210)
+|||+|||+|.++..+++.+. +++++|+|+.+++.++++.... .++.+.++|+.+.+ +++++||+|++... |+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~--~~-- 105 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFD-IVADAWEGIVSIFC--HL-- 105 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBS-CCTTTCSEEEEECC--CC--
T ss_pred CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcC-CCcCCccEEEEEhh--cC--
Confidence 899999999999999998866 8999999999999999887432 37899999999988 88899999998543 33
Q ss_pred CCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 89 GTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 89 ~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+..+...+++++.++|||||.+++.++..
T Consensus 106 ---~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 106 ---PSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp ---CHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred ---CHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 34789999999999999999999988764
No 62
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.73 E-value=3.1e-17 Score=130.98 Aligned_cols=104 Identities=13% Similarity=0.146 Sum_probs=90.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
...+|||||||+|.++..+++. +. +|+|+|+|+.+++.++++.... +++++..+|+.+++ ++||+|++..+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~fD~v~~~~~ 138 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD----EPVDRIVSIGA 138 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC----CCCSEEEEESC
T ss_pred CcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC----CCeeEEEEeCc
Confidence 4468999999999999999854 55 9999999999999999987532 57999999997643 78999999999
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
++|+ +..+...+++++.++|||||.+++.+...
T Consensus 139 l~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 139 FEHF-----GHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp GGGT-----CTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred hhhc-----ChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 9998 44678999999999999999999987654
No 63
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.73 E-value=2.1e-17 Score=133.09 Aligned_cols=112 Identities=13% Similarity=0.141 Sum_probs=92.5
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
....+|||||||+|.++..+++. + .+|+|+|+|+.+++.|+++.... .++++.++|+.++ +++||+|++..
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~fD~v~~~~ 145 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF----DEPVDRIVSLG 145 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC----CCCCSEEEEES
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc----CCCccEEEEcc
Confidence 34468999999999999999988 7 58999999999999999987432 3799999999764 68999999999
Q ss_pred ccchhccCC--CchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 82 TLDSLMCGT--NAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 82 ~l~~~~~~~--~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
+++|+.... .+..+...+++++.++|||||.+++.++..+.
T Consensus 146 ~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 146 AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 999982110 02356689999999999999999998876543
No 64
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.72 E-value=8.2e-18 Score=134.90 Aligned_cols=107 Identities=10% Similarity=0.001 Sum_probs=82.5
Q ss_pred CCCCEEEeCCCCchhHHHHH----Hc-CCCc--EEEEeCCHHHHHHHHHhhcC---CCCcE--EEEcccCCCC-----CC
Q 028385 7 GTRDTCRRAAPSIVMSEDMV----KD-GYED--IVNIDISSVAIDMMKMKYEE---IPQLK--YLQMDVRDMS-----FF 69 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~----~~-~~~~--v~~vD~s~~~~~~a~~~~~~---~~~v~--~~~~d~~~~~-----~~ 69 (210)
...+|||||||+|.++..++ .. +... ++++|+|+.|++.|+++... .+++. +..+++.+++ .+
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 44689999999998765433 22 3333 39999999999999998743 24554 4455555432 14
Q ss_pred CCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 70 EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 70 ~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
++++||+|++..++||+ +++.+++++++|+|||||++++.....
T Consensus 132 ~~~~fD~V~~~~~l~~~-------~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYV-------KDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp CCCCEEEEEEESCGGGC-------SCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred CCCceeEEEEeeeeeec-------CCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 67899999999999999 899999999999999999999876543
No 65
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.72 E-value=2.1e-17 Score=128.48 Aligned_cols=105 Identities=14% Similarity=0.170 Sum_probs=90.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCCCCCCCcccEEEECC-ccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFFEDESFDAVIDKG-TLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~-~l~ 84 (210)
...+|||+|||+|.++..+++.+. +++++|+|+.|++.++++.... .++.+.++|+.+++ ++ ++||+|++.. +++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~-~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-IN-RKFDLITCCLDSTN 113 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-CS-CCEEEEEECTTGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCC-cc-CCceEEEEcCcccc
Confidence 446899999999999999998865 8999999999999999987433 37999999999988 66 8999999998 999
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
|+ .+..+...+++++.++|||||.+++...
T Consensus 114 ~~----~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 114 YI----IDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp GC----CSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cc----CCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 87 2236789999999999999999987443
No 66
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.72 E-value=9.7e-18 Score=135.27 Aligned_cols=109 Identities=15% Similarity=0.083 Sum_probs=90.9
Q ss_pred CCCCEEEeCCCCchhHHHHH--HcCCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 7 GTRDTCRRAAPSIVMSEDMV--KDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~--~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
...+|||+|||+|.++..++ ..+..+|+++|+|+.+++.|+++.... .+++++++|+.+++ ++ ++||+|+++.
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD-TR-EGYDLLTSNG 195 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC-CC-SCEEEEECCS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC-cc-CCeEEEEECC
Confidence 34689999999999999884 345568999999999999999998643 35999999999998 77 9999999999
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
+++|+ ........+++++.++|||||++++.++..+
T Consensus 196 ~~~~~----~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 231 (305)
T 3ocj_A 196 LNIYE----PDDARVTELYRRFWQALKPGGALVTSFLTPP 231 (305)
T ss_dssp SGGGC----CCHHHHHHHHHHHHHHEEEEEEEEEECCCCC
T ss_pred hhhhc----CCHHHHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 99987 1123344589999999999999999876643
No 67
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.72 E-value=6.2e-17 Score=127.56 Aligned_cols=101 Identities=14% Similarity=0.147 Sum_probs=82.7
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCC----CCCCcccEEEECC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF----FEDESFDAVIDKG 81 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~----~~~~~fD~Vi~~~ 81 (210)
....+|||+|||+|.++..+++.+. +|+++|+|+.|++.|+++.... ++..++.+.+. ..+++||+|++..
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~~~~~~~~~fD~Vv~~~ 118 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR----CVTIDLLDITAEIPKELAGHFDFVLNDR 118 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS----CCEEEECCTTSCCCGGGTTCCSEEEEES
T ss_pred CCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc----cceeeeeecccccccccCCCccEEEEhh
Confidence 3456899999999999999999876 8999999999999999988543 23444444430 1257899999999
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+++|+ ..++...+++++.++| |||++++..
T Consensus 119 ~l~~~-----~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 119 LINRF-----TTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp CGGGS-----CHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred hhHhC-----CHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 99998 5678889999999999 999998754
No 68
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.72 E-value=7.3e-18 Score=134.94 Aligned_cols=112 Identities=16% Similarity=0.224 Sum_probs=90.4
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC------CCCcEEEEcccCCCC--CCCCCcccEEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE------IPQLKYLQMDVRDMS--FFEDESFDAVI 78 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~~--~~~~~~fD~Vi 78 (210)
...+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|+++... ..++.+..+|+.+++ .+++++||+|+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~ 135 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVI 135 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEE
Confidence 346899999999999999999876 999999999999999887511 146889999987753 13678999999
Q ss_pred EC-CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 79 DK-GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 79 ~~-~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+. .+++|+........+..+++++++++|||||++++...+
T Consensus 136 ~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 136 CLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp ECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 98 899998221112245999999999999999999877643
No 69
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.72 E-value=5e-17 Score=122.15 Aligned_cols=107 Identities=8% Similarity=0.060 Sum_probs=89.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCcEEEEcccCCCC-CCCCCcccEEEECCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMS-FFEDESFDAVIDKGTL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~v~~~~~d~~~~~-~~~~~~fD~Vi~~~~l 83 (210)
...+|||+|||+|.++..+++.+..+|+++|+|+.+++.|+++.+. .++++++++|+.+.. .+++++||+|+++..+
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 3468999999999999988888777899999999999999998743 358999999998853 1447899999998887
Q ss_pred chhccCCCchHHHHHHHHHHHH--hccCCcEEEEEEcC
Q 028385 84 DSLMCGTNAPISASQMLGEVSR--LLKPGGIYMLITYG 119 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r--~LkpgG~~~~~~~~ 119 (210)
++. ..+..++++++.+ +|||||.+++....
T Consensus 124 ~~~------~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 124 NVD------SADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp TSC------HHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred Ccc------hhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 652 2678899999999 99999999886643
No 70
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.72 E-value=1.3e-17 Score=133.51 Aligned_cols=108 Identities=22% Similarity=0.235 Sum_probs=82.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC--------------------------------
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP-------------------------------- 54 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------------------------------- 54 (210)
...+|||||||+|..+..++..+..+|+|+|+|+.|++.|+++.+..+
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 446899999999996554444344589999999999999988653210
Q ss_pred CcEEEEcccCC-CC----CCCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 55 QLKYLQMDVRD-MS----FFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 55 ~v~~~~~d~~~-~~----~~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.+.++.+|+.+ ++ .+++++||+|+++.+++|+. ....+..+++++++++|||||++++..
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~---~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVS---PDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHC---SSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhc---CCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 14577779887 54 13456799999999999930 011789999999999999999998874
No 71
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.72 E-value=7.9e-17 Score=130.52 Aligned_cols=106 Identities=8% Similarity=0.058 Sum_probs=92.1
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
...+|||+|||+|.++..+++. +. +|+++|+|+.+++.++++.... +++++.++|+.+++ ++||+|++..+
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----~~fD~v~~~~~ 164 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA----EPVDRIVSIEA 164 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC----CCCSEEEEESC
T ss_pred CcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC----CCcCEEEEeCh
Confidence 4468999999999999999987 65 8999999999999999987543 46999999997654 68999999999
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
++|+ +..+...+++++.++|||||.+++.+...+.
T Consensus 165 l~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 165 FEHF-----GHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp GGGT-----CGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred HHhc-----CHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 9998 5568899999999999999999998876443
No 72
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.71 E-value=5.1e-17 Score=126.01 Aligned_cols=105 Identities=18% Similarity=0.269 Sum_probs=89.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEE-CCccch
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVID-KGTLDS 85 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~-~~~l~~ 85 (210)
...+|||+|||+|.++..+++.+. +++++|+|+.+++.++++. +++.+.++|+.+++ + +++||+|++ ..+++|
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~---~~~~~~~~d~~~~~-~-~~~~D~v~~~~~~~~~ 113 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL---PDATLHQGDMRDFR-L-GRKFSAVVSMFSSVGY 113 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC---TTCEEEECCTTTCC-C-SSCEEEEEECTTGGGG
T ss_pred CCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC---CCCEEEECCHHHcc-c-CCCCcEEEEcCchHhh
Confidence 346899999999999999998865 8999999999999999886 57899999999987 6 779999996 458888
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
+ ....+...+++++.++|||||.+++..+..+
T Consensus 114 ~----~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 114 L----KTTEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp C----CSHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred c----CCHHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 7 1236788999999999999999988765543
No 73
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.71 E-value=5.7e-17 Score=127.81 Aligned_cols=102 Identities=18% Similarity=0.270 Sum_probs=87.9
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...+|||+|||+|.++..+++.+. +++++|+|+.|++.++++... .+.++|+.+++ +++++||+|++..++.|+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~----~~~~~d~~~~~-~~~~~fD~v~~~~~~~~~ 127 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGVK----NVVEAKAEDLP-FPSGAFEAVLALGDVLSY 127 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTCS----CEEECCTTSCC-SCTTCEEEEEECSSHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcCC----CEEECcHHHCC-CCCCCEEEEEEcchhhhc
Confidence 456899999999999999998865 899999999999999988752 28999999988 888999999998876664
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
. .+...+++++.++|||||.+++...+.
T Consensus 128 -----~-~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 128 -----V-ENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp -----C-SCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred -----c-ccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 1 348899999999999999998877553
No 74
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.71 E-value=3.3e-16 Score=123.47 Aligned_cols=112 Identities=14% Similarity=0.142 Sum_probs=87.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCC-CCCCCcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMS-FFEDESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~-~~~~~~fD~Vi~~~~ 82 (210)
...+|||+|||+|.++..+++.+..+|+++|+++.+++.|+++.... .+++++++|+.+.+ .+++++||+|+++..
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 45689999999999999999886558999999999999999987532 46999999999865 245789999999876
Q ss_pred cchh-ccCCC------------chHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 83 LDSL-MCGTN------------APISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 83 l~~~-~~~~~------------~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
+... ..+.. ...+...+++++.++|||||+++++..
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 177 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR 177 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc
Confidence 6432 11111 124567899999999999999988653
No 75
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.70 E-value=1.3e-16 Score=126.95 Aligned_cols=109 Identities=18% Similarity=0.217 Sum_probs=90.5
Q ss_pred CCCCEEEeCCCC---chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC----------CCCCC
Q 028385 7 GTRDTCRRAAPS---IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----------FFEDE 72 (210)
Q Consensus 7 ~~~~vLdiGcG~---G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~----------~~~~~ 72 (210)
+..+|||||||+ |.++..+.+. +..+|+++|+|+.|++.|+++....++++++++|+.+.+ .++.+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 446899999999 9888766654 445899999999999999999865578999999997631 13335
Q ss_pred cccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 73 SFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 73 ~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+||+|++..++||+ +..+...++++++++|||||++++.++..
T Consensus 157 ~~d~v~~~~vlh~~-----~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 157 RPAAIMLVGMLHYL-----SPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp SCCEEEETTTGGGS-----CTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCEEEEEechhhhC-----CcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 89999999999999 33348999999999999999999988765
No 76
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.70 E-value=9.5e-17 Score=129.85 Aligned_cols=111 Identities=18% Similarity=0.168 Sum_probs=91.1
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC---------CCCcEEEEcccCCCC---CC--CCC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE---------IPQLKYLQMDVRDMS---FF--EDE 72 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------~~~v~~~~~d~~~~~---~~--~~~ 72 (210)
...+|||+|||+|.++..+++.+..+++++|+|+.|++.++++... ..+++++++|+.+.+ .+ +++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 3468999999999999999987666899999999999999988642 247899999999864 13 345
Q ss_pred cccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 73 SFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 73 ~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+||+|++..++||+. .+..+...+++++.++|||||.+++.+.+.
T Consensus 114 ~fD~V~~~~~l~~~~---~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 114 CFDICSCQFVCHYSF---ESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp CEEEEEEETCGGGGG---GSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CEEEEEEecchhhcc---CCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 999999999998751 123667899999999999999998887654
No 77
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.70 E-value=1.2e-16 Score=125.10 Aligned_cols=103 Identities=23% Similarity=0.398 Sum_probs=86.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCCCCCCCcccEEEECC-ccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFFEDESFDAVIDKG-TLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~-~l~ 84 (210)
...+|||+|||+|.++..+++.+. +++|+|+|+.|++.|+++.... .++.++++|+.+++ ++ ++||+|++.. .++
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~-~~-~~fD~v~~~~~~~~ 117 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-FK-NEFDAVTMFFSTIM 117 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-CC-SCEEEEEECSSGGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcc-cC-CCccEEEEcCCchh
Confidence 346899999999999999999876 8999999999999999887432 47999999999987 54 6899999874 344
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
++ +..+..++++++.++|||||.+++..
T Consensus 118 ~~-----~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 118 YF-----DEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp GS-----CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cC-----CHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 44 44688999999999999999997643
No 78
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.70 E-value=8.2e-17 Score=123.74 Aligned_cols=95 Identities=16% Similarity=0.198 Sum_probs=86.1
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchhc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLM 87 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~~ 87 (210)
..+|||+|||+|.++..+++. +++|+|+.+++.++++ ++.+.++|+.+++ +++++||+|++..+++|+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~-----~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~- 115 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR-----GVFVLKGTAENLP-LKDESFDFALMVTTICFV- 115 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT-----TCEEEECBTTBCC-SCTTCEEEEEEESCGGGS-
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc-----CCEEEEcccccCC-CCCCCeeEEEEcchHhhc-
Confidence 568999999999999888654 9999999999999886 5899999999988 888899999999999999
Q ss_pred cCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 88 CGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 88 ~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
.+...+++++.++|||||.+++.....
T Consensus 116 ------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 116 ------DDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp ------SCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ------cCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 788999999999999999999887654
No 79
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.70 E-value=3.6e-17 Score=125.62 Aligned_cols=100 Identities=13% Similarity=0.145 Sum_probs=86.3
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCC---CCCCCCcccEEEECCccc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM---SFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~---~~~~~~~fD~Vi~~~~l~ 84 (210)
..+|||+|||+|.++..+++.+. +++++|+|+.+++.++++ .++.+..+|+.++ +...+++||+|++..+++
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~ 127 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA----GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL 127 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT----CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh----cccccchhhHHhhcccccccCCCccEEEECchhh
Confidence 47899999999999999998866 899999999999999987 5678888888876 412345599999999998
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
. .+...++++++++|||||++++.+...
T Consensus 128 -~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 128 -H-------QDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp -S-------SCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred -h-------hhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 5 678899999999999999999988654
No 80
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.69 E-value=1.2e-16 Score=122.40 Aligned_cols=100 Identities=13% Similarity=0.082 Sum_probs=78.3
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCC----CCCCCCcccEEEECC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM----SFFEDESFDAVIDKG 81 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~----~~~~~~~fD~Vi~~~ 81 (210)
...+|||+|||+|.++..+++. +..+|+|+|+|+.|++.+.+..+...++.++.+|+... + +. ++||+|++..
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~-~~-~~fD~V~~~~ 134 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSG-IV-EKVDLIYQDI 134 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTT-TC-CCEEEEEECC
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcc-cc-cceeEEEEec
Confidence 4468999999999999999876 33489999999998876665554446789999998874 3 44 7999999872
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.++ .....++++++++|||||++++..
T Consensus 135 -~~~--------~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 135 -AQK--------NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp -CST--------THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -cCh--------hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 111 345567999999999999998874
No 81
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.69 E-value=1.5e-16 Score=123.61 Aligned_cols=102 Identities=17% Similarity=0.277 Sum_probs=87.5
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCCCCCCCcccEEEECC-ccch
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFFEDESFDAVIDKG-TLDS 85 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~-~l~~ 85 (210)
..+|||+|||+|.++..+++. .+++++|+|+.+++.|+++.... .++++.++|+.+++ ++ ++||+|++.. +++|
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~-~~fD~v~~~~~~~~~ 109 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE-LP-EPVDAITILCDSLNY 109 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC-CS-SCEEEEEECTTGGGG
T ss_pred CCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC-CC-CCcCEEEEeCCchhh
Confidence 368999999999999999887 58999999999999999887432 57999999999887 65 7899999986 8887
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+ .+..+...+++++.++|||||.+++..
T Consensus 110 ~----~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 110 L----QTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp C----CSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c----CCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 6 234678899999999999999997644
No 82
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.69 E-value=9.7e-17 Score=123.44 Aligned_cols=99 Identities=19% Similarity=0.280 Sum_probs=87.7
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCC--CCCCCCCcccEEEECCccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD--MSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~--~~~~~~~~fD~Vi~~~~l~ 84 (210)
...+|||+|||+|.++..+++.+ .+++++|+|+.+++.++++. .++.++|+.+ .+ +++++||+|++..+++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~-----~~~~~~d~~~~~~~-~~~~~fD~v~~~~~l~ 104 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL-----DHVVLGDIETMDMP-YEEEQFDCVIFGDVLE 104 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS-----SEEEESCTTTCCCC-SCTTCEEEEEEESCGG
T ss_pred CCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC-----CcEEEcchhhcCCC-CCCCccCEEEECChhh
Confidence 45689999999999999999886 59999999999999998765 3788999987 45 7788999999999999
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
|+ .+...+++++.++|||||.+++....
T Consensus 105 ~~-------~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 105 HL-------FDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp GS-------SCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred hc-------CCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 99 77889999999999999999887644
No 83
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.69 E-value=3.6e-16 Score=129.15 Aligned_cols=106 Identities=13% Similarity=0.141 Sum_probs=91.7
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCC--CCCCCCcccEEEEC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDM--SFFEDESFDAVIDK 80 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~--~~~~~~~fD~Vi~~ 80 (210)
+..+|||||||+|.++..+++. +..+++++|+ +.+++.|+++.... ++++++.+|+.+. | ++ ++||+|++.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~p-~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVP-FP-TGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCC-CC-CCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCC-CC-CCcCEEEEe
Confidence 4568999999999999999885 4458999999 99999999987543 4799999999885 4 55 789999999
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
.++|++ +.++..+++++++++|||||++++.+...
T Consensus 256 ~vlh~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (363)
T 3dp7_A 256 QFLDCF-----SEEEVISILTRVAQSIGKDSKVYIMETLW 290 (363)
T ss_dssp SCSTTS-----CHHHHHHHHHHHHHHCCTTCEEEEEECCT
T ss_pred chhhhC-----CHHHHHHHHHHHHHhcCCCcEEEEEeecc
Confidence 999988 55677899999999999999999988653
No 84
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.69 E-value=2.8e-16 Score=117.64 Aligned_cols=105 Identities=14% Similarity=0.203 Sum_probs=89.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCC--cEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQ--LKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~--v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
...+|||+|||+|.++..+++. ..+++++|+++.+++.++++... ..+ +++.++|+.+. +++++||+|+++.+
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~ 128 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN--VKDRKYNKIITNPP 128 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT--CTTSCEEEEEECCC
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc--cccCCceEEEECCC
Confidence 4568999999999999999888 44899999999999999998742 344 99999999874 45789999999988
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+++. ......+++++.++|||||.+++.....
T Consensus 129 ~~~~------~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 129 IRAG------KEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp STTC------HHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred cccc------hhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 8761 2778899999999999999999888764
No 85
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.69 E-value=1.2e-15 Score=115.85 Aligned_cols=102 Identities=13% Similarity=0.061 Sum_probs=85.3
Q ss_pred CCCCEEEeCCCCchhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
...+|||+|||+|.++..+++.+ ..+++++|+|+.+++.|+++.. ..++++++++|+.+.. ...++||+|++...+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~i~~~~~~ 118 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGL-DDLPDPDRVFIGGSG 118 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTC-TTSCCCSEEEESCCT
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhh-hcCCCCCEEEECCCC
Confidence 44689999999999999999874 4589999999999999998874 3368999999997654 334789999987765
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+ +...+++++.++|||||++++....
T Consensus 119 ~----------~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 119 G----------MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp T----------CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred c----------CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 3 4578999999999999999887655
No 86
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.68 E-value=2.1e-16 Score=131.14 Aligned_cols=109 Identities=17% Similarity=0.254 Sum_probs=92.1
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
...+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++.... .+++++++|+.+.. .++++||+|+++.++|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~-~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEAL-TEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTS-CTTCCEEEEEECCCCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcc-ccCCCeEEEEECCchhh
Confidence 446899999999999999999865 9999999999999999987533 35899999999987 66689999999999887
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
. ..........+++++.++|||||.++++...
T Consensus 311 ~--~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 311 G--GAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp T--CSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred c--ccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 2 0112378899999999999999999887643
No 87
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.68 E-value=2.9e-16 Score=138.89 Aligned_cols=106 Identities=10% Similarity=0.110 Sum_probs=90.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCC--CcEEEEeCCHHHHHHHHHhhc--------CCCCcEEEEcccCCCCCCCCCcccE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGY--EDIVNIDISSVAIDMMKMKYE--------EIPQLKYLQMDVRDMSFFEDESFDA 76 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~--------~~~~v~~~~~d~~~~~~~~~~~fD~ 76 (210)
...+|||+|||+|.++..+++.+. .+|+|+|+|+.|++.|+++.. ..++++|+++|+.+++ +.+++||+
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp-~~d~sFDl 799 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFD-SRLHDVDI 799 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCC-TTSCSCCE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCC-cccCCeeE
Confidence 456899999999999999998862 489999999999999988542 2368999999999998 88899999
Q ss_pred EEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 77 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 77 Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
|++..+++|+ +......+++++.++|||| .+++.+..
T Consensus 800 VV~~eVLeHL-----~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 800 GTCLEVIEHM-----EEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EEEESCGGGS-----CHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EEEeCchhhC-----ChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 9999999999 4455667999999999999 66666543
No 88
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.68 E-value=9.1e-17 Score=121.34 Aligned_cols=112 Identities=16% Similarity=0.128 Sum_probs=88.3
Q ss_pred CCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
..+|||+|||+|.++..+++. +..+++++|+++.+++.|+++.... ++++++++|+.+++.+.+++||+|++...
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 102 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLG 102 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEES
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCC
Confidence 468999999999999999887 4458999999999999999987532 57999999998875355689999998765
Q ss_pred cchhcc--CCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 83 LDSLMC--GTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 83 l~~~~~--~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+..... ......+..++++++.++|||||++++..+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 103 YLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp BCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 511000 0012346678999999999999999988764
No 89
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.68 E-value=3.1e-16 Score=121.14 Aligned_cols=114 Identities=12% Similarity=0.096 Sum_probs=88.2
Q ss_pred CCCCEEEeCCC-CchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 7 GTRDTCRRAAP-SIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
...+|||+||| +|.++..+++....+|+++|+|+.+++.|+++.... .+++++++|+..+..+++++||+|+++..++
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~ 134 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYY 134 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCc
Confidence 45689999999 999999999873348999999999999999987433 3799999998654336678999999987776
Q ss_pred hhcc------------CCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 85 SLMC------------GTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 85 ~~~~------------~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+... +.........+++++.++|||||++++.....
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 182 (230)
T 3evz_A 135 DKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK 182 (230)
T ss_dssp ---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC
T ss_pred CCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc
Confidence 5311 11122345889999999999999998875444
No 90
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.68 E-value=2.4e-16 Score=125.12 Aligned_cols=103 Identities=15% Similarity=0.254 Sum_probs=84.3
Q ss_pred CCCEEEeCCCCch----hHHHHHHc-C----CCcEEEEeCCHHHHHHHHHhhc------------------------C--
Q 028385 8 TRDTCRRAAPSIV----MSEDMVKD-G----YEDIVNIDISSVAIDMMKMKYE------------------------E-- 52 (210)
Q Consensus 8 ~~~vLdiGcG~G~----~~~~l~~~-~----~~~v~~vD~s~~~~~~a~~~~~------------------------~-- 52 (210)
..+|||+|||||. ++..+++. + ..+|+|+|+|+.|++.|+++.. .
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 4689999999998 55555554 3 2389999999999999998641 0
Q ss_pred C-------CCcEEEEcccCCCCCCC-CCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 53 I-------PQLKYLQMDVRDMSFFE-DESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 53 ~-------~~v~~~~~d~~~~~~~~-~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
. .++.|.++|+.+.+ ++ .++||+|+|.++++|+ +.+...++++++++.|||||++++.
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~-~~~~~~fDlI~crnvliyf-----~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQ-YNVPGPFDAIFCRNVMIYF-----DKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSS-CCCCCCEEEEEECSSGGGS-----CHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eeechhhcccCeEEecccCCCC-CCcCCCeeEEEECCchHhC-----CHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 0 26899999999866 65 5789999999999998 5567799999999999999999763
No 91
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.68 E-value=1e-15 Score=117.39 Aligned_cols=112 Identities=15% Similarity=0.108 Sum_probs=84.5
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCC-CCCCCcccEEEECCcc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMS-FFEDESFDAVIDKGTL 83 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~-~~~~~~fD~Vi~~~~l 83 (210)
..+|||||||+|.++..+++. +..+++|+|+|+.+++.|+++.. +.+++.++++|+.+++ .+++++||.|++.+..
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~~ 118 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSD 118 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESCC
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECCC
Confidence 457999999999999999886 45589999999999999998874 3468999999998854 2567899999875443
Q ss_pred chhccC-CCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 84 DSLMCG-TNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 84 ~~~~~~-~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
.+.... ...+-....+++++.++|||||.+++.+-.
T Consensus 119 p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 119 PWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp CCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred CCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 221000 000001468899999999999999887633
No 92
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.67 E-value=3.9e-16 Score=121.67 Aligned_cols=100 Identities=14% Similarity=0.157 Sum_probs=83.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCC---CCcccEEEEC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFE---DESFDAVIDK 80 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~---~~~fD~Vi~~ 80 (210)
...+|||+|||+|.++..++.. +..+|+++|+|+.|++.++++.. ...+++++++|+.+++ +. +++||+|++.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFG-QRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHT-TCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhc-ccccccCCccEEEEe
Confidence 4468999999999999999863 44589999999999999998764 3357999999998876 53 6799999986
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
. + .+...+++++.++|||||.+++..-
T Consensus 149 ~----~-------~~~~~~l~~~~~~LkpgG~l~~~~g 175 (240)
T 1xdz_A 149 A----V-------ARLSVLSELCLPLVKKNGLFVALKA 175 (240)
T ss_dssp C----C-------SCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred c----c-------CCHHHHHHHHHHhcCCCCEEEEEeC
Confidence 5 2 4578999999999999999987653
No 93
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.67 E-value=1.4e-16 Score=121.02 Aligned_cols=105 Identities=14% Similarity=0.177 Sum_probs=85.5
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CC--CCcEEEEcccCCCC-CCCCCc-ccEEEECC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EI--PQLKYLQMDVRDMS-FFEDES-FDAVIDKG 81 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~--~~v~~~~~d~~~~~-~~~~~~-fD~Vi~~~ 81 (210)
..+|||+|||+|.++..++..+..+|+++|+|+.|++.|+++.+ .. ++++++++|+.+.. .+.+++ ||+|++..
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 133 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDP 133 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECC
T ss_pred CCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECC
Confidence 45899999999999998888776689999999999999999874 22 47999999998753 124678 99999987
Q ss_pred ccchhccCCCchHHHHHHHHHH--HHhccCCcEEEEEEcCC
Q 028385 82 TLDSLMCGTNAPISASQMLGEV--SRLLKPGGIYMLITYGD 120 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i--~r~LkpgG~~~~~~~~~ 120 (210)
.++ . .....+++.+ .++|||||.+++.....
T Consensus 134 ~~~-~-------~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 134 PFH-F-------NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CSS-S-------CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCC-C-------ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 754 3 5677888888 67899999998776543
No 94
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.67 E-value=1.3e-16 Score=126.44 Aligned_cols=106 Identities=13% Similarity=0.013 Sum_probs=88.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CC-CcEEEEeCCHH------HHHHHHHhhcCC---CCcEEEEcc---cCCCCCCCCC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GY-EDIVNIDISSV------AIDMMKMKYEEI---PQLKYLQMD---VRDMSFFEDE 72 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~-~~v~~vD~s~~------~~~~a~~~~~~~---~~v~~~~~d---~~~~~~~~~~ 72 (210)
...+|||||||+|.++..+++. +. .+|+++|+|+. +++.++++.... +++++.++| ...++ ++++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~~ 121 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGP-IADQ 121 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGG-GTTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCC-CCCC
Confidence 4468999999999999999987 32 58999999997 999999987543 579999998 44455 7789
Q ss_pred cccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 73 SFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 73 ~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+||+|++..+++|+ .+...+++.+.++++|||.+++.++..
T Consensus 122 ~fD~v~~~~~l~~~-------~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 122 HFDRVVLAHSLWYF-------ASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp CCSEEEEESCGGGS-------SCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred CEEEEEEccchhhC-------CCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 99999999999998 666677777888888899999988764
No 95
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.67 E-value=2.2e-16 Score=129.29 Aligned_cols=99 Identities=13% Similarity=0.121 Sum_probs=85.4
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECCc-
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKGT- 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~- 82 (210)
...+|||+|||+|.++..+++.+..+|+|+|+|+ |++.|+++.+. . ++++++++|+.+++ +++++||+|++..+
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH-LPVEKVDVIISEWMG 141 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSCSCEEEEEECCCB
T ss_pred CCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc-CCCCcEEEEEEcCch
Confidence 3468999999999999999998766899999997 99999988743 2 68999999999988 88889999999763
Q ss_pred --cchhccCCCchHHHHHHHHHHHHhccCCcEEE
Q 028385 83 --LDSLMCGTNAPISASQMLGEVSRLLKPGGIYM 114 (210)
Q Consensus 83 --l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~ 114 (210)
+++. .....++.++.++|||||.++
T Consensus 142 ~~l~~~-------~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFE-------SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTT-------CHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCH-------HHHHHHHHHHHhhcCCCcEEE
Confidence 4443 678889999999999999987
No 96
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.67 E-value=1.1e-15 Score=121.82 Aligned_cols=100 Identities=8% Similarity=0.080 Sum_probs=82.5
Q ss_pred CCCCCEEEeCCCCchhHH-HHHHcCCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 6 TGTRDTCRRAAPSIVMSE-DMVKDGYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~-~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
....+|||||||+|.++. .+++....+|+++|+|+.|++.|+++.+ ...+++|+++|+.+++ +++||+|++...
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~---d~~FDvV~~~a~ 197 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID---GLEFDVLMVAAL 197 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG---GCCCSEEEECTT
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC---CCCcCEEEECCC
Confidence 445789999999987764 4555445599999999999999999874 3378999999998764 689999997544
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
. ++..++++++.|+|||||++++...
T Consensus 198 ---~-------~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 198 ---A-------EPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp ---C-------SCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ---c-------cCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 3 6788999999999999999988764
No 97
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.67 E-value=1.1e-16 Score=123.19 Aligned_cols=107 Identities=16% Similarity=0.082 Sum_probs=84.1
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCC-C-CCCCCcccEEEECCc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDM-S-FFEDESFDAVIDKGT 82 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~-~-~~~~~~fD~Vi~~~~ 82 (210)
..+|||||||+|.++..+++. +..+|+|+|+|+.+++.|+++.. ...|+.++++|+.++ + .+++++||.|++++.
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~ 114 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFP 114 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESC
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCC
Confidence 457999999999999999976 44579999999999999998874 346899999999884 2 167899999998744
Q ss_pred cchhccCCCchHHH------HHHHHHHHHhccCCcEEEEEEcC
Q 028385 83 LDSLMCGTNAPISA------SQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 83 l~~~~~~~~~~~~~------~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
..+. ..... ..+++++.++|||||.+++.+-.
T Consensus 115 ~p~~-----~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 115 DPWH-----KARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp CCCC-----SGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCcc-----chhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 3221 00111 25999999999999999887743
No 98
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.67 E-value=2.2e-16 Score=129.75 Aligned_cols=102 Identities=15% Similarity=0.167 Sum_probs=85.7
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
..+|||+|||+|.++..+++.+..+|+|+|+|+ |++.|+++.+. . ++++++++|+.+++ +++++||+|++..+.+
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVE-LPVEKVDIIISEWMGY 144 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSSCEEEEEECCCBB
T ss_pred CCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHcc-CCCCceEEEEEccccc
Confidence 468999999999999999999777999999995 99999988743 2 45999999999998 8889999999976544
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEE
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYML 115 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~ 115 (210)
++. .......++.++.++|||||+++.
T Consensus 145 ~l~----~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 145 CLF----YESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TBT----BTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccc----CchhHHHHHHHHHHhCCCCCEEcc
Confidence 331 226778899999999999999864
No 99
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.67 E-value=1.7e-16 Score=120.63 Aligned_cols=100 Identities=13% Similarity=0.144 Sum_probs=85.2
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
...+|||+|||+|.++..+++.+..+++++|+|+.+++.|+++.. ...++++.++|+.+. .+++||+|+++..++
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD---VDGKFDLIVANILAE 136 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT---CCSCEEEEEEESCHH
T ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc---CCCCceEEEECCcHH
Confidence 346899999999999999998877799999999999999999874 334599999999764 358999999987765
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
++ ..+++++.++|||||.+++.++.
T Consensus 137 ~~----------~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 137 IL----------LDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp HH----------HHHGGGSGGGEEEEEEEEEEEEE
T ss_pred HH----------HHHHHHHHHhcCCCCEEEEEecC
Confidence 54 78899999999999999887654
No 100
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.67 E-value=3.6e-16 Score=121.11 Aligned_cols=100 Identities=13% Similarity=0.132 Sum_probs=82.9
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCC----CCCCCCCcccEEEEC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD----MSFFEDESFDAVIDK 80 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~----~~~~~~~~fD~Vi~~ 80 (210)
....+|||+|||+|.++..+++. +..+|+++|+|+.+++.++++....+++.++.+|+.+ .+ +. ++||+|+.
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~-~~-~~~D~v~~- 149 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYAN-IV-EKVDVIYE- 149 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTT-TS-CCEEEEEE-
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccc-cC-ccEEEEEE-
Confidence 34568999999999999999987 5458999999999999999988666889999999988 66 55 78999993
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
++ ........+++++.++|||||.+++.
T Consensus 150 ----~~----~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 150 ----DV----AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ----CC----CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----ec----CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 22 01134477899999999999999886
No 101
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.66 E-value=6.8e-16 Score=125.85 Aligned_cols=107 Identities=8% Similarity=0.057 Sum_probs=90.2
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
...+|||+|||+|.++..+++. +..+++++|+ +.+++.++++... . ++++|+.+|+. .+ ++. .||+|++.++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~-~p~-~~D~v~~~~v 244 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DP-LPA-GAGGYVLSAV 244 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-CCC-SCSEEEEESC
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CC-CCC-CCcEEEEehh
Confidence 3468999999999999999875 4558999999 9999999988642 2 67999999997 34 555 8999999999
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
+|++ +.+...+++++++++|||||++++.+...+.
T Consensus 245 lh~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 245 LHDW-----DDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp GGGS-----CHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred hccC-----CHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 9998 4555799999999999999999998876543
No 102
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.66 E-value=4.5e-15 Score=117.13 Aligned_cols=111 Identities=14% Similarity=0.099 Sum_probs=85.3
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcC---C---CCcEEEEcccCCCC------CCCCC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEE---I---PQLKYLQMDVRDMS------FFEDE 72 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~---~---~~v~~~~~d~~~~~------~~~~~ 72 (210)
....+|||+|||+|.++..+++.. ..+++++|+++.+++.|+++... . .+++++++|+.+.. .++++
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 345689999999999999998873 45899999999999999999865 3 35999999998861 15678
Q ss_pred cccEEEECCccchhccCC------------CchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 73 SFDAVIDKGTLDSLMCGT------------NAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 73 ~fD~Vi~~~~l~~~~~~~------------~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+||+|+++..+.... +. ........+++++.++|||||.++++.
T Consensus 115 ~fD~Vv~nPPy~~~~-~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAG-DRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp CEEEEEECCCC----------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcCEEEECCCCcCCC-CCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 999999986554321 00 011236788999999999999998765
No 103
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.66 E-value=5.2e-16 Score=118.70 Aligned_cols=88 Identities=19% Similarity=0.270 Sum_probs=76.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...+|||+|||+|.++..++ .+++++|+|+. ++.+.++|+.+++ +++++||+|++..++| .
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~-------------~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~-~ 127 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR----NPVHCFDLASL-------------DPRVTVCDMAQVP-LEDESVDVAVFCLSLM-G 127 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC----SCEEEEESSCS-------------STTEEESCTTSCS-CCTTCEEEEEEESCCC-S
T ss_pred CCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC-------------CceEEEeccccCC-CCCCCEeEEEEehhcc-c
Confidence 44689999999999988772 48999999986 5788999999988 8889999999999986 3
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
.+...+++++.++|||||.+++.++..
T Consensus 128 -------~~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 128 -------TNIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp -------SCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred -------cCHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 577899999999999999999987643
No 104
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.66 E-value=2.4e-17 Score=138.43 Aligned_cols=103 Identities=14% Similarity=0.125 Sum_probs=85.3
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...+|||||||+|.++..+++.+. +++|+|+|+.+++.|+++........+...++..++ +++++||+|++.++++|+
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~-~~~~~fD~I~~~~vl~h~ 184 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVR-RTEGPANVIYAANTLCHI 184 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHH-HHHCCEEEEEEESCGGGC
T ss_pred CCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcc-cCCCCEEEEEECChHHhc
Confidence 456899999999999999999876 899999999999999987311111223345555566 678899999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
.++..++++++++|||||++++...
T Consensus 185 -------~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 185 -------PYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp -------TTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------CCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 8999999999999999999988654
No 105
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.65 E-value=2.8e-16 Score=116.65 Aligned_cols=105 Identities=13% Similarity=0.085 Sum_probs=85.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCC-CCCCCCCcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRD-MSFFEDESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~-~~~~~~~~fD~Vi~~~~ 82 (210)
...+|||+|||+|.++..+++.+..+++++|+|+.+++.|+++.... ++++++++|+.+ ++ ..+++||+|++...
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~fD~i~~~~~ 109 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAID-CLTGRFDLVFLDPP 109 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHH-HBCSCEEEEEECCS
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHH-hhcCCCCEEEECCC
Confidence 44689999999999999999887668999999999999999988544 468999999987 33 33467999999877
Q ss_pred cchhccCCCchHHHHHHHHHHH--HhccCCcEEEEEEcCC
Q 028385 83 LDSLMCGTNAPISASQMLGEVS--RLLKPGGIYMLITYGD 120 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~--r~LkpgG~~~~~~~~~ 120 (210)
++. ......++.+. ++|||||.+++.....
T Consensus 110 ~~~--------~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 110 YAK--------ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp SHH--------HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCc--------chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 642 45566677776 9999999998876543
No 106
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.65 E-value=4.7e-16 Score=120.22 Aligned_cols=99 Identities=15% Similarity=0.095 Sum_probs=84.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...+|||+|||+|.++..+++.+ .+|+++|+++.+++.++++.....++++.++|+.+.. ..+++||+|++..+++|+
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY-EEEKPYDRVVVWATAPTL 147 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC-GGGCCEEEEEESSBBSSC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccc-ccCCCccEEEECCcHHHH
Confidence 44689999999999999999887 5899999999999999999865458999999998733 346789999999999988
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
. .++.++|||||++++.....
T Consensus 148 -------~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 148 -------L------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp -------C------HHHHHTEEEEEEEEEEECSS
T ss_pred -------H------HHHHHHcCCCcEEEEEEcCC
Confidence 2 46899999999998876443
No 107
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.65 E-value=1.4e-15 Score=117.67 Aligned_cols=104 Identities=11% Similarity=0.031 Sum_probs=86.4
Q ss_pred CCCCCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC--CCCCCcccEEEEC
Q 028385 5 STGTRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS--FFEDESFDAVIDK 80 (210)
Q Consensus 5 ~~~~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~--~~~~~~fD~Vi~~ 80 (210)
.....+|||+|||+|.++..+++. +..+|+++|+++.|++.++++.++.+|+..+.+|..+.. .+..+++|+|++.
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d 154 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYAD 154 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEe
Confidence 344568999999999999999986 445899999999999999999887789999999987632 2667899999864
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.. +. .+...++.++++.|||||++++..
T Consensus 155 ~~--~~-------~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 155 VA--QP-------EQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp CC--CT-------THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc--CC-------hhHHHHHHHHHHhccCCCEEEEEE
Confidence 33 33 567889999999999999998764
No 108
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.65 E-value=1.4e-15 Score=116.48 Aligned_cols=111 Identities=18% Similarity=0.177 Sum_probs=85.1
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCC-CCCCCcccEEEECCcc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMS-FFEDESFDAVIDKGTL 83 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~-~~~~~~fD~Vi~~~~l 83 (210)
..+|||+|||+|.++..+++. +..+++|+|+|+.+++.|+++.. ..+++.++++|+.+++ .+++++||+|+++...
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~ 121 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSD 121 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESCC
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECCC
Confidence 457999999999999999886 44589999999999999998874 3368999999998864 2567899999987654
Q ss_pred chhccC-CCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 84 DSLMCG-TNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 84 ~~~~~~-~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
.+.... ...+.....+++++.++|||||.+++.+-
T Consensus 122 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 122 PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 322000 00000236799999999999999988753
No 109
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.65 E-value=3.7e-15 Score=113.19 Aligned_cols=102 Identities=13% Similarity=0.138 Sum_probs=84.0
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC--CCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
..+|||+|||+|.++..+++. +..+++++|+|+.+++.++++... ..++++.++|+.+.+ +.++||+|++...
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP--SEPPFDGVISRAF-- 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC--CCSCEEEEECSCS--
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC--ccCCcCEEEEecc--
Confidence 468999999999999999886 456899999999999999988743 356999999998865 4678999997542
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
.+...+++++.++|||||.+++.......
T Consensus 142 ---------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 170 (207)
T 1jsx_A 142 ---------ASLNDMVSWCHHLPGEQGRFYALKGQMPE 170 (207)
T ss_dssp ---------SSHHHHHHHHTTSEEEEEEEEEEESSCCH
T ss_pred ---------CCHHHHHHHHHHhcCCCcEEEEEeCCCch
Confidence 34578999999999999999887644433
No 110
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.64 E-value=2.6e-16 Score=130.16 Aligned_cols=108 Identities=7% Similarity=-0.035 Sum_probs=87.4
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc---------C--CCCcEEEEcccCCCCCCCC--
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE---------E--IPQLKYLQMDVRDMSFFED-- 71 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~---------~--~~~v~~~~~d~~~~~~~~~-- 71 (210)
....+|||||||+|.++..++.. +..+++|+|+++.+++.|+++.+ . ..+++|+++|+.+++ +.+
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp-~~d~~ 250 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEE-WRERI 250 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHH-HHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCc-ccccc
Confidence 34568999999999999999865 55469999999999999987431 1 268999999999987 644
Q ss_pred CcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 72 ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 72 ~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
..||+|+++..++ . ++....|.+++++|||||++++.+...|.
T Consensus 251 ~~aDVVf~Nn~~F-~-------pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 251 ANTSVIFVNNFAF-G-------PEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp HTCSEEEECCTTC-C-------HHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred CCccEEEEccccc-C-------chHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 4799999987753 3 68888999999999999999887655443
No 111
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.64 E-value=3.7e-16 Score=119.09 Aligned_cols=99 Identities=12% Similarity=0.034 Sum_probs=84.4
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
....+|||+|||+|.++..+++.+ .+|+++|+++.+++.++++... .+++++..+|+.+.. ..+++||+|++..++
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW-QARAPFDAIIVTAAP 153 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEESSBC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC-ccCCCccEEEEccch
Confidence 345689999999999999999885 4899999999999999998753 368999999998866 567899999999999
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+++ . +++.++|||||++++....
T Consensus 154 ~~~-------~------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 154 PEI-------P------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SSC-------C------THHHHTEEEEEEEEEEECS
T ss_pred hhh-------h------HHHHHhcccCcEEEEEEcC
Confidence 988 2 2689999999999876543
No 112
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.64 E-value=7.9e-16 Score=125.34 Aligned_cols=108 Identities=10% Similarity=0.184 Sum_probs=92.2
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
.+..+|||+|||+|.++..+++. +..+++++|++ .+++.++++... . .+++++.+|+.+.+ ++++ ||+|++..
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~-~D~v~~~~ 240 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVD-YGND-YDLVLLPN 240 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSC-CCSC-EEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCC-CCCC-CcEEEEcc
Confidence 45578999999999999999886 34589999999 999999988632 2 46999999998876 6554 99999999
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
++|++ +.++..+++++++++|||||++++.+...+
T Consensus 241 ~l~~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 241 FLHHF-----DVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp CGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred hhccC-----CHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 99998 566778999999999999999999887644
No 113
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.64 E-value=5.2e-16 Score=119.88 Aligned_cols=91 Identities=7% Similarity=0.137 Sum_probs=78.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEccc-CCCCCCC-CCcccEEEECCccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDV-RDMSFFE-DESFDAVIDKGTLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~-~~~~~~~-~~~fD~Vi~~~~l~ 84 (210)
...+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++. ++++++++|+ ..++ ++ +++||+|+++.
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~---~~~~~~~~d~~~~~~-~~~~~~fD~v~~~~--- 119 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARANA---PHADVYEWNGKGELP-AGLGAPFGLIVSRR--- 119 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHC---TTSEEEECCSCSSCC-TTCCCCEEEEEEES---
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhC---CCceEEEcchhhccC-CcCCCCEEEEEeCC---
Confidence 346899999999999999999865 8999999999999999984 6899999999 5577 77 88999999862
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEE
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYML 115 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~ 115 (210)
+...+++++.++|||||.++.
T Consensus 120 ----------~~~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 120 ----------GPTSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp ----------CCSGGGGGHHHHEEEEEEEEE
T ss_pred ----------CHHHHHHHHHHHcCCCcEEEE
Confidence 334668899999999999973
No 114
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.64 E-value=2.2e-16 Score=137.47 Aligned_cols=106 Identities=13% Similarity=0.150 Sum_probs=87.3
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCcEEEEcccCCCC-CCCCCcccEEEECCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMS-FFEDESFDAVIDKGTL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~-~~~~~~fD~Vi~~~~l 83 (210)
..++|||||||+|.++..|++.|. +|+|+|.++.+++.|+.+.... .+++|.+++++++. .+.+++||+|+|..++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 347899999999999999999988 8999999999999999887543 47899999999872 1567899999999999
Q ss_pred chhccCCCchHHHH--HHHHHHHHhccCCcEEEEEEcCC
Q 028385 84 DSLMCGTNAPISAS--QMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 84 ~~~~~~~~~~~~~~--~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+|+ .+.. ..+..+.+.|+++|..++..+..
T Consensus 145 ehv-------~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 145 HHI-------VHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp HHH-------HHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred hcC-------CCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 999 5443 33556777788888777766543
No 115
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.64 E-value=4.6e-16 Score=118.30 Aligned_cols=102 Identities=5% Similarity=0.003 Sum_probs=83.6
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCcEEEEcccCC-CCCCCCCcccEEEECCccc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRD-MSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~-~~~~~~~~fD~Vi~~~~l~ 84 (210)
..+|||+|||+|.++..++..+..+|+++|+|+.|++.|+++.+.. ++++++++|+.+ ++ ..+++||+|++...++
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~-~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLA-QKGTPHNIVFVDPPFR 133 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHS-SCCCCEEEEEECCSSS
T ss_pred CCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHh-hcCCCCCEEEECCCCC
Confidence 4589999999999999888877668999999999999999987433 589999999987 45 5677999999987744
Q ss_pred hhccCCCchHHHHHHHHHHHH--hccCCcEEEEEEc
Q 028385 85 SLMCGTNAPISASQMLGEVSR--LLKPGGIYMLITY 118 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r--~LkpgG~~~~~~~ 118 (210)
. .....+++++.+ +|||||.+++...
T Consensus 134 -~-------~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 134 -R-------GLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp -T-------TTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred -C-------CcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 3 455677777765 5999999987654
No 116
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.64 E-value=3.5e-15 Score=118.61 Aligned_cols=100 Identities=16% Similarity=0.212 Sum_probs=84.3
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEEC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDK 80 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~ 80 (210)
....+|||+|||+|.++..+++. +..+++++|+++.+++.|+++.+.. +++++.++|+.+ + +++++||+|++
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~-~~~~~fD~Vi~- 185 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-F-ISDQMYDAVIA- 185 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-C-CCSCCEEEEEE-
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-c-CcCCCccEEEE-
Confidence 34468999999999999999886 3458999999999999999987543 689999999987 4 67789999997
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
++ ++...+++++.++|||||++++.+..
T Consensus 186 ----~~-------~~~~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 186 ----DI-------PDPWNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp ----CC-------SCGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred ----cC-------cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 23 44568899999999999999888754
No 117
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.64 E-value=2.2e-15 Score=114.72 Aligned_cols=99 Identities=12% Similarity=0.038 Sum_probs=81.7
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CC-CcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IP-QLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~-~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
...+|||+|||+|.++..+++. ..+|+++|+|+.+++.|+++.+. .+ +++++++|+.+.. .....||+|++...+
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~~~D~v~~~~~~ 132 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL-ADLPLPEAVFIGGGG 132 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG-TTSCCCSEEEECSCC
T ss_pred CCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc-ccCCCCCEEEECCcc
Confidence 3468999999999999999998 44899999999999999998743 34 7999999998843 234579999986533
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+.. +++++.++|||||++++....
T Consensus 133 -----------~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 133 -----------SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp -----------CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred -----------cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 234 899999999999999887755
No 118
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.64 E-value=2.5e-15 Score=124.30 Aligned_cols=107 Identities=10% Similarity=0.047 Sum_probs=90.6
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC---CCCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE---IPQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~---~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
....+|||+|||+|.++..+++. +..+++++|+ +.+++.++++... .++++++.+|+. .+ ++. .||+|++..
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~-~p~-~~D~v~~~~ 276 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ET-IPD-GADVYLIKH 276 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TC-CCS-SCSEEEEES
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CC-CCC-CceEEEhhh
Confidence 34578999999999999999886 4458999999 9999999988742 267999999998 44 555 899999999
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
++|++ +.+...+++++++++|||||++++.+...+
T Consensus 277 vlh~~-----~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 277 VLHDW-----DDDDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp CGGGS-----CHHHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred hhccC-----CHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 99998 455566999999999999999999886543
No 119
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.63 E-value=1.3e-15 Score=112.92 Aligned_cols=101 Identities=11% Similarity=0.069 Sum_probs=81.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC--C-CcEEEEcccCC-CCCCCCCcccEEEECC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI--P-QLKYLQMDVRD-MSFFEDESFDAVIDKG 81 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~--~-~v~~~~~d~~~-~~~~~~~~fD~Vi~~~ 81 (210)
...+|||+|||+|.++..+++. +..+++++|+|+.+++.++++.... + ++ ++.+|+.+ ++ ..+++||+|++..
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~-~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFD-DVPDNPDVIFIGG 102 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGG-GCCSCCSEEEECC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhh-ccCCCCCEEEECC
Confidence 4468999999999999999887 4558999999999999999987543 3 67 88888754 33 2238999999988
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
.+++ ..+++++.++|||||.+++.....
T Consensus 103 ~~~~-----------~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 103 GLTA-----------PGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp -TTC-----------TTHHHHHHHTCCTTCEEEEEECSH
T ss_pred cccH-----------HHHHHHHHHhcCCCCEEEEEeecc
Confidence 8765 467999999999999998887654
No 120
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.63 E-value=1.3e-15 Score=118.64 Aligned_cols=112 Identities=13% Similarity=0.094 Sum_probs=81.8
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc--------CCCCcEEEEcccCC-CC-CCCCCcccE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE--------EIPQLKYLQMDVRD-MS-FFEDESFDA 76 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~--------~~~~v~~~~~d~~~-~~-~~~~~~fD~ 76 (210)
..+|||||||+|.++..+++. +...++|+|+|+.|++.|+++.. ...|+.++++|+.+ ++ .+++++||.
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~ 126 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTK 126 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEE
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeE
Confidence 457999999999999999886 45589999999999999987642 34789999999987 43 156889999
Q ss_pred EEECCccchhccC-CCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 77 VIDKGTLDSLMCG-TNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 77 Vi~~~~l~~~~~~-~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
|++.+.-.+.... ...+-....+++++.++|||||.+++.+..
T Consensus 127 v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 127 MFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 9875433221000 000001147999999999999999887643
No 121
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.63 E-value=2.2e-16 Score=117.67 Aligned_cols=99 Identities=8% Similarity=0.046 Sum_probs=82.8
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC--C-CcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI--P-QLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~--~-~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
..+|||+|||+|.++..++.. +..+|+++|+|+.|++.++++.... . ++.+ .|.... .+.++||+|++..++
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~--~~~~~~DvVLa~k~L 125 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD--VYKGTYDVVFLLKML 125 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH--HTTSEEEEEEEETCH
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc--CCCCCcChhhHhhHH
Confidence 568999999999999999776 4449999999999999999998532 2 4544 555443 357889999999999
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
|++ ++.+..+.++.+.|||||.|+...
T Consensus 126 HlL-------~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 126 PVL-------KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHH-------HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred Hhh-------hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 999 888889999999999999997654
No 122
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.62 E-value=1.2e-15 Score=125.30 Aligned_cols=108 Identities=17% Similarity=0.234 Sum_probs=90.9
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
..+|||||||+|.++..+++. +..+++++|+ +.+++.++++.... ++++++.+|+.+.+.+..+.||+|++..++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 578999999999999999886 4458999999 88999999876432 469999999987542245679999999999
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
|++ +.++..+++++++++|||||++++.+...+
T Consensus 259 h~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 259 HYF-----DAREAREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp GGS-----CHHHHHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred ccC-----CHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 998 556679999999999999999999886543
No 123
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=118.05 Aligned_cols=101 Identities=9% Similarity=-0.008 Sum_probs=81.4
Q ss_pred CCCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCC---CCCCCCCcccEEEECC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD---MSFFEDESFDAVIDKG 81 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~---~~~~~~~~fD~Vi~~~ 81 (210)
...+|||+|||+|.++..+++. +..+|+++|+|+.+++.+.++.+..+++.++++|+.+ ++ +.+++||+|++..
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~-~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYR-MLIAMVDVIFADV 155 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGG-GGCCCEEEEEECC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhc-ccCCcEEEEEEcC
Confidence 4568999999999999999987 3458999999999888777666544789999999987 34 4578999999854
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
. .. .....++.++.++|||||.+++..
T Consensus 156 ~--~~-------~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 156 A--QP-------DQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp C--CT-------THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred C--Cc-------cHHHHHHHHHHHHcCCCeEEEEEE
Confidence 4 11 445667899999999999998853
No 124
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.62 E-value=1.1e-15 Score=126.70 Aligned_cols=105 Identities=14% Similarity=0.129 Sum_probs=86.8
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
....+|||+|||+|.++..+++.+..+|+|+|+| .|++.|+++.+.. ++++++++|+.+++ ++ ++||+|++..+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~-~~~D~Iv~~~~ 138 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS-LP-EKVDVIISEWM 138 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC-CS-SCEEEEEECCC
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC-cC-CcceEEEEcCh
Confidence 3456899999999999999999877799999999 9999999887432 45999999999988 66 89999999765
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.+++ ........+++++.++|||||.+++..
T Consensus 139 ~~~l----~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 139 GYFL----LRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp BTTB----TTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred hhcc----cchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 5443 122457889999999999999997643
No 125
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.62 E-value=3.7e-15 Score=122.76 Aligned_cols=107 Identities=18% Similarity=0.209 Sum_probs=90.8
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
....+|||||||+|.++..+++. +..+++++|+ +.+++.++++.+. . ++++++.+|+.+.+ +++. |+|++..
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~--D~v~~~~ 264 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKES-YPEA--DAVLFCR 264 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSC-CCCC--SEEEEES
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCC-CCCC--CEEEEec
Confidence 34568999999999999999886 3458999999 9999999988742 2 45999999999876 6554 9999999
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
++|++ +.+...+++++++++|||||++++.++..+
T Consensus 265 vlh~~-----~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 265 ILYSA-----NEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp CGGGS-----CHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred hhccC-----CHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 99998 445589999999999999999999886654
No 126
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.62 E-value=1.8e-15 Score=125.33 Aligned_cols=108 Identities=15% Similarity=0.178 Sum_probs=85.7
Q ss_pred CCCEEEeCCCCchhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC-----CCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI-----PQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
..+|||+|||+|.++..+++.. ..+|+++|+|+.+++.++++.... .+++|..+|+.+ + +++++||+|+++.
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~-~~~~~fD~Ii~np 300 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-G-VEPFRFNAVLCNP 300 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-T-CCTTCEEEEEECC
T ss_pred CCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-c-CCCCCeeEEEECC
Confidence 3789999999999999999873 558999999999999999987432 258889999987 4 6788999999999
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
.+|+... .......++++++.++|||||.++++...
T Consensus 301 pfh~~~~--~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 301 PFHQQHA--LTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp CC---------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred CcccCcc--cCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 9876311 12234567899999999999999887644
No 127
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.62 E-value=1.9e-15 Score=118.64 Aligned_cols=104 Identities=10% Similarity=0.059 Sum_probs=85.6
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCC---CCcccEEEE
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFE---DESFDAVID 79 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~---~~~fD~Vi~ 79 (210)
....+|||||||+|..+..++.. +..+|+++|+|+.+++.++++.. ...+++++++|+.+++ .. +++||+|++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~-~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLA-REAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHT-TSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhh-cccccCCCceEEEE
Confidence 34568999999999999999876 55689999999999999999874 3357999999998876 32 479999998
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
..+ .+...+++.+.++|||||++++..-..+
T Consensus 158 ~a~-----------~~~~~ll~~~~~~LkpgG~l~~~~g~~~ 188 (249)
T 3g89_A 158 RAV-----------APLCVLSELLLPFLEVGGAAVAMKGPRV 188 (249)
T ss_dssp ESS-----------CCHHHHHHHHGGGEEEEEEEEEEECSCC
T ss_pred CCc-----------CCHHHHHHHHHHHcCCCeEEEEEeCCCc
Confidence 643 3457899999999999999988764333
No 128
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.62 E-value=1.5e-15 Score=123.81 Aligned_cols=101 Identities=18% Similarity=0.196 Sum_probs=84.1
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
..+|||+|||+|.++..+++.+..+|+++|+| .|++.|+++.+. . ++++++.+|+.+++ +++++||+|++..+.+
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDIIISEWMGY 116 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEEEEECCCBT
T ss_pred CCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc-CCCCcccEEEEeCchh
Confidence 45899999999999999999877789999999 599999888743 2 56999999999988 7878999999986544
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEE
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYM 114 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~ 114 (210)
++. .......++.++.++|||||.++
T Consensus 117 ~l~----~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 117 FLL----YESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TBS----TTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hcc----cHHHHHHHHHHHHhhcCCCeEEE
Confidence 331 12567789999999999999986
No 129
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.61 E-value=3.8e-15 Score=123.18 Aligned_cols=104 Identities=13% Similarity=0.130 Sum_probs=87.6
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
....+|||+|||+|.++..+++. +..+++++|+ +.+++.++++... . ++++++.+|+.+ + ++. .||+|++..
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~~~-~~D~v~~~~ 256 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-P-LPV-TADVVLLSF 256 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-C-CSC-CEEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-c-CCC-CCCEEEEec
Confidence 34568999999999999999886 3458999999 9999999988743 2 479999999976 3 444 399999999
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
++|++ +.....+++++++++|||||++++.+.
T Consensus 257 vl~~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 257 VLLNW-----SDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp CGGGS-----CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccCC-----CHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 99998 445556999999999999999999887
No 130
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.61 E-value=2.5e-15 Score=111.20 Aligned_cols=100 Identities=14% Similarity=0.144 Sum_probs=79.9
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchhc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLM 87 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~~ 87 (210)
..+|||+|||+|.++..+++.+ +|+|+|+|+.|++. .++++++++|+.+ + +++++||+|+++..+++..
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~-------~~~~~~~~~d~~~-~-~~~~~fD~i~~n~~~~~~~ 92 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES-------HRGGNLVRADLLC-S-INQESVDVVVFNPPYVPDT 92 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT-------CSSSCEEECSTTT-T-BCGGGCSEEEECCCCBTTC
T ss_pred CCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc-------ccCCeEEECChhh-h-cccCCCCEEEECCCCccCC
Confidence 4589999999999999999877 89999999999987 2678999999988 4 5678999999998887641
Q ss_pred cC--CCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 88 CG--TNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 88 ~~--~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
.. .....+...+++++.+.| |||.+++....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 93 DDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp CCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred ccccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 10 001123456788888888 99999887754
No 131
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.61 E-value=3.9e-15 Score=117.63 Aligned_cols=96 Identities=23% Similarity=0.313 Sum_probs=82.7
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
...+|||+|||+|.++..+++. +..+++++|+|+.+++.|+++. +++.+..+|+.+++ +++++||+|++.++.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~d~~~~~-~~~~~fD~v~~~~~~-- 158 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---PQVTFCVASSHRLP-FSDTSMDAIIRIYAP-- 158 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---TTSEEEECCTTSCS-BCTTCEEEEEEESCC--
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---CCcEEEEcchhhCC-CCCCceeEEEEeCCh--
Confidence 4468999999999999999987 3458999999999999999886 67899999999988 888999999986542
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
..++++.++|||||.+++.+...
T Consensus 159 ------------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 ------------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp ------------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred ------------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 23789999999999999887654
No 132
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.61 E-value=1.9e-14 Score=118.44 Aligned_cols=113 Identities=12% Similarity=0.067 Sum_probs=88.6
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcC--CCcEEEEeCCHHHHHHHHHhhcCC--CCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDG--YEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
....+|||+|||+|.++..++... ..+++|+|+++.+++.|+++.+.. .+++|.++|+.+++ .+.+.||+|+++.
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~-~~~~~~D~Ii~np 280 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLP-RFFPEVDRILANP 280 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGG-GTCCCCSEEEECC
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCc-cccCCCCEEEECC
Confidence 345689999999999999998863 358999999999999999987533 47999999999987 6677899999986
Q ss_pred ccchhccCC-CchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 82 TLDSLMCGT-NAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 82 ~l~~~~~~~-~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
.+....... ........+++++.++|||||.+++++..
T Consensus 281 Pyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 281 PHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp CSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred CCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 654321000 01133578999999999999999888743
No 133
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.61 E-value=1.9e-15 Score=112.89 Aligned_cols=100 Identities=15% Similarity=0.218 Sum_probs=84.1
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCCCCCC-CcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFED-ESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~~~~~-~~fD~Vi~~~~ 82 (210)
...+|||+|||+|.++..+++.. .+++++|+|+.+++.++++... . +++.+.++|+.+ + ++. ++||+|++..+
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~-~~~~~~~D~v~~~~~ 109 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-A-LCKIPDIDIAVVGGS 109 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-H-HTTSCCEEEEEESCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-h-cccCCCCCEEEECCc
Confidence 44689999999999999999887 6999999999999999988743 2 578999999877 2 233 58999999877
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
++++ ..+++++.++|+|||.+++..+.
T Consensus 110 ~~~~----------~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 110 GGEL----------QEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp TTCH----------HHHHHHHHHTEEEEEEEEEEECB
T ss_pred hHHH----------HHHHHHHHHhcCCCcEEEEEecC
Confidence 6544 78899999999999999887765
No 134
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.61 E-value=2.5e-15 Score=122.48 Aligned_cols=103 Identities=11% Similarity=0.096 Sum_probs=88.7
Q ss_pred CCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC---CCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 9 RDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE---IPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~---~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
.+|||+|||+|.++..+++. +..+++++|+ +.+++.++++... .++++++.+|+.+ + ++ +.||+|++..++|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~~-~~~D~v~~~~vl~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-E-VP-SNGDIYLLSRIIG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-C-CC-SSCSEEEEESCGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-C-CC-CCCCEEEEchhcc
Confidence 78999999999999999886 4458999999 9999999988642 2579999999987 5 55 6799999999999
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
++ +.+...+++++++++|||||++++.+...
T Consensus 245 ~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 245 DL-----DEAASLRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp GC-----CHHHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred CC-----CHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 88 44566799999999999999999988653
No 135
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.61 E-value=7.5e-16 Score=115.02 Aligned_cols=105 Identities=15% Similarity=0.100 Sum_probs=83.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCC-C--CCCCcccEEEEC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMS-F--FEDESFDAVIDK 80 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~-~--~~~~~fD~Vi~~ 80 (210)
...+|||+|||+|.++..+++.+..+|+++|+|+.+++.|+++... . ++++++++|+.+.. . +.+++||+|++.
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 4468999999999999998887766899999999999999988743 2 47999999987732 0 226789999998
Q ss_pred CccchhccCCCchHHHHHHHHHH--HHhccCCcEEEEEEcC
Q 028385 81 GTLDSLMCGTNAPISASQMLGEV--SRLLKPGGIYMLITYG 119 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i--~r~LkpgG~~~~~~~~ 119 (210)
.+++. ......++.+ .++|||||.+++....
T Consensus 124 ~~~~~--------~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 124 PPYAK--------QEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp CCGGG--------CCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCCc--------hhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 77542 2345556666 8999999999877644
No 136
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.61 E-value=4e-17 Score=127.11 Aligned_cols=99 Identities=13% Similarity=0.106 Sum_probs=84.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
...+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++.... ++++++++|+.+++ ++++||+|+++.++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA--SFLKADVVFLSPPW 154 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG--GGCCCSEEEECCCC
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc--ccCCCCEEEECCCc
Confidence 35689999999999999999987 49999999999999999987432 47999999998875 56799999999999
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEE
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYML 115 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~ 115 (210)
++. ......+.+++++|||||.+++
T Consensus 155 ~~~-------~~~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 155 GGP-------DYATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp SSG-------GGGGSSSBCTTTSCSSCHHHHH
T ss_pred CCc-------chhhhHHHHHHhhcCCcceeHH
Confidence 887 5555577789999999998644
No 137
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.60 E-value=7.9e-16 Score=117.98 Aligned_cols=101 Identities=13% Similarity=0.140 Sum_probs=78.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhh------cCCCCcEEEEcccCCCCCCCCCcccEEEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDG-YEDIVNIDISSVAIDMMKMKY------EEIPQLKYLQMDVRDMSFFEDESFDAVID 79 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~------~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~ 79 (210)
...+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.+.++. ...+++.++++|+.+++ +++++ |.|..
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~-~~~~~-d~v~~ 104 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP-PLSGV-GELHV 104 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC-SCCCE-EEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC-CCCCC-CEEEE
Confidence 44689999999999999999873 458999999999888643222 22368999999999998 77777 77764
Q ss_pred CCcc-----chhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 80 KGTL-----DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 80 ~~~l-----~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
.... +|+ .+...++++++++|||||.+++.
T Consensus 105 ~~~~~~~~~~~~-------~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 105 LMPWGSLLRGVL-------GSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp ESCCHHHHHHHH-------TSSSHHHHHHHHTEEEEEEEEEE
T ss_pred Eccchhhhhhhh-------ccHHHHHHHHHHHcCCCcEEEEE
Confidence 3321 134 44589999999999999999874
No 138
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.60 E-value=2.4e-15 Score=123.49 Aligned_cols=102 Identities=15% Similarity=0.132 Sum_probs=85.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CC-CCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EI-PQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
...+|||||||+|.++..+++.+..+|+++|+|+ +++.|+++.+ .. ++++++.+|+.+++ ++ ++||+|++..++
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~-~~~D~Ivs~~~~ 126 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS-LP-EQVDIIISEPMG 126 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-CS-SCEEEEEECCCB
T ss_pred CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC-CC-CceeEEEEeCch
Confidence 4468999999999999999998777999999996 8888888764 22 67999999999987 55 689999999888
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
+|+ ..+.....+.++.++|||||.+++.
T Consensus 127 ~~~-----~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 127 YML-----FNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TTB-----TTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred hcC-----ChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 876 3345677888999999999999753
No 139
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.59 E-value=4.7e-15 Score=122.65 Aligned_cols=102 Identities=16% Similarity=0.124 Sum_probs=86.5
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
.+..+|||||||+|.++..+++. +..+++++|+ +.+++.+++. ++++++.+|+.+ + ++++ |+|++..++|
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~v~~~~~d~~~-~-~p~~--D~v~~~~vlh 272 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF----SGVEHLGGDMFD-G-VPKG--DAIFIKWICH 272 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----TTEEEEECCTTT-C-CCCC--SEEEEESCGG
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc----CCCEEEecCCCC-C-CCCC--CEEEEechhh
Confidence 45578999999999999999886 4558999999 8888766532 689999999987 6 6654 9999999999
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
++ +.++..+++++++++|||||++++.+...+
T Consensus 273 ~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 273 DW-----SDEHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp GB-----CHHHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred cC-----CHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 98 556778999999999999999999987643
No 140
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.59 E-value=2.7e-15 Score=115.45 Aligned_cols=106 Identities=11% Similarity=0.096 Sum_probs=85.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCC-CCCCC----CCcccE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRD-MSFFE----DESFDA 76 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~-~~~~~----~~~fD~ 76 (210)
...+|||+|||+|..+..+++. ...+|+++|+++.+++.|+++.+. . ++++++++|+.+ ++.+. .++||+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 3468999999999999999985 245899999999999999998742 2 469999999866 33122 278999
Q ss_pred EEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 77 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 77 Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
|++....++. .+..+++.++ ++|||||++++.+...
T Consensus 138 V~~d~~~~~~-------~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 138 VFLDHWKDRY-------LPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp EEECSCGGGH-------HHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred EEEcCCcccc-------hHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 9998888777 6777888888 9999999998866543
No 141
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.59 E-value=4.1e-15 Score=121.88 Aligned_cols=107 Identities=14% Similarity=0.154 Sum_probs=86.5
Q ss_pred CCCEEEeCCCCchhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
..+|||+|||+|.++..+++.+ ..+++++|+|+.|++.++++.... .++.+..+|+.+. .+++||+|+++.++|+
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~---~~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE---VKGRFDMIISNPPFHD 273 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT---CCSCEEEEEECCCCCS
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc---ccCCeeEEEECCCccc
Confidence 4689999999999999998874 348999999999999999987432 3467888888653 3679999999999875
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
... .......++++++.++|||||.++++...
T Consensus 274 g~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 274 GMQ--TSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp SSH--HHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred Ccc--CCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 100 02267899999999999999999888654
No 142
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.59 E-value=1.4e-14 Score=111.65 Aligned_cols=102 Identities=15% Similarity=0.097 Sum_probs=81.8
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC--CCCCCcccEEEECC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS--FFEDESFDAVIDKG 81 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~--~~~~~~fD~Vi~~~ 81 (210)
....+|||+|||+|.++..+++. + ..+|+++|+|+.+++.++++.+..++++++++|+.+.. ....++||+|++..
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~ 151 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDV 151 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECC
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECC
Confidence 34568999999999999999976 3 35899999999999999988876688999999998732 02246899999764
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
. .. .....++.++.++|||||.+++.
T Consensus 152 ~--~~-------~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 152 A--QP-------TQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp C--ST-------THHHHHHHHHHHHEEEEEEEEEE
T ss_pred C--CH-------hHHHHHHHHHHHhcCCCCEEEEE
Confidence 4 11 33455699999999999999887
No 143
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.59 E-value=1.9e-16 Score=120.51 Aligned_cols=112 Identities=11% Similarity=0.089 Sum_probs=70.2
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCC-CcEEEEcccCCCCCCCC-----CcccEEE
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMSFFED-----ESFDAVI 78 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~~~~-----~~fD~Vi 78 (210)
....+|||+|||+|.++..+++.. ..+++++|+|+.+++.++++..... +++++++|+.+ + +++ ++||+|+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~-~~~~~~~~~~fD~i~ 106 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-W-LIERAERGRPWHAIV 106 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-H-HHHHHHTTCCBSEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-h-hhhhhhccCcccEEE
Confidence 345689999999999999999873 3489999999999999998875432 68899999887 4 555 8999999
Q ss_pred ECCccchhcc-------------------CCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 79 DKGTLDSLMC-------------------GTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 79 ~~~~l~~~~~-------------------~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
++..+++... +.........+++++.++|||||+++++.+.
T Consensus 107 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 107 SNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp ECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred ECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 9766543210 0011122388999999999999995565544
No 144
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.59 E-value=1.4e-14 Score=115.64 Aligned_cols=104 Identities=14% Similarity=0.162 Sum_probs=84.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeC-CHHHHHHHHHhh-----cCC-------CCcEEEEcccCCCC-CC---
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDI-SSVAIDMMKMKY-----EEI-------PQLKYLQMDVRDMS-FF--- 69 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~-s~~~~~~a~~~~-----~~~-------~~v~~~~~d~~~~~-~~--- 69 (210)
...+|||+|||+|.++..+++.+..+|+++|+ |+.+++.++++. +.. +++++...|..+.. .+
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 34589999999999999999887668999999 899999999987 322 26888877765531 11
Q ss_pred -CCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhcc---C--CcEEEEEE
Q 028385 70 -EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLK---P--GGIYMLIT 117 (210)
Q Consensus 70 -~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~Lk---p--gG~~~~~~ 117 (210)
.+++||+|++..++++. .+...+++++.++|| | ||.++++.
T Consensus 159 ~~~~~fD~Ii~~dvl~~~-------~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFH-------QAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HSCSSBSEEEEESCCSCG-------GGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred ccCCCCCEEEEeCcccCh-------HHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 36789999999999888 889999999999999 9 99876643
No 145
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.58 E-value=9.5e-15 Score=120.22 Aligned_cols=105 Identities=13% Similarity=0.181 Sum_probs=87.9
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
....+|||+|||+|.++..+++. +..+++++|+ +.+++.++++... . ++++++.+|+.+ + ++. .||+|++..
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~-~~~-~~D~v~~~~ 257 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-P-LPR-KADAIILSF 257 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-C-CSS-CEEEEEEES
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-C-CCC-CccEEEEcc
Confidence 34568999999999999999886 3458999999 9999999988743 2 479999999876 3 444 499999999
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
++|++ +..+..+++++++++|||||++++.+..
T Consensus 258 vl~~~-----~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 258 VLLNW-----PDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp CGGGS-----CHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cccCC-----CHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 99998 4455679999999999999999998876
No 146
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.58 E-value=6.1e-15 Score=121.79 Aligned_cols=102 Identities=15% Similarity=0.114 Sum_probs=86.9
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
.+..+|||||||+|.++..+++. +..+++++|+ +.+++.+++ .++++|+.+|+.+ + ++.+ |+|++..++|
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~D~~~-~-~p~~--D~v~~~~vlh 270 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----FPGVTHVGGDMFK-E-VPSG--DTILMKWILH 270 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----CTTEEEEECCTTT-C-CCCC--SEEEEESCGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh----cCCeEEEeCCcCC-C-CCCC--CEEEehHHhc
Confidence 45578999999999999999876 5558999999 888876654 2689999999988 6 7755 9999999999
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
++ +.++..+++++++++|||||++++.+...+
T Consensus 271 ~~-----~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 271 DW-----SDQHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp GS-----CHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred cC-----CHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 88 567788999999999999999999987643
No 147
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.58 E-value=4e-15 Score=118.55 Aligned_cols=99 Identities=12% Similarity=0.122 Sum_probs=83.5
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CC-CCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EI-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
..+|||+|||+|.++..+++.+..+|+++|+|+.+++.|+++.+ +. ++++++++|+.+.+ . +++||+|++....
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~-~-~~~fD~Vi~~~p~- 202 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-G-ENIADRILMGYVV- 202 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-C-CSCEEEEEECCCS-
T ss_pred CCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc-c-cCCccEEEECCch-
Confidence 46899999999999999999876579999999999999999874 33 34899999999987 4 7899999986442
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
....++.++.++|||||.+++.++.
T Consensus 203 ----------~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 203 ----------RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp ----------SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ----------hHHHHHHHHHHHCCCCeEEEEEEee
Confidence 2356788999999999999988765
No 148
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.58 E-value=6.8e-15 Score=112.44 Aligned_cols=101 Identities=9% Similarity=-0.074 Sum_probs=82.6
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCC--CcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGY--EDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
....+|||+|||+|.++..+++... .+|+++|+++.+++.++++.. ..+++++..+|+.... ..+++||+|++..
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~ 154 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGY-EPLAPYDRIYTTA 154 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCC-GGGCCEEEEEESS
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CCCCCeeEEEECC
Confidence 3456899999999999999988742 589999999999999998864 3357999999986532 2367899999999
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+++++ . +++.++|||||.+++.....
T Consensus 155 ~~~~~-------~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 155 AGPKI-------P------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp BBSSC-------C------HHHHHTEEEEEEEEEEESSS
T ss_pred chHHH-------H------HHHHHHcCCCcEEEEEECCC
Confidence 99988 2 48899999999998876433
No 149
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.58 E-value=4.5e-15 Score=117.13 Aligned_cols=110 Identities=11% Similarity=0.108 Sum_probs=84.7
Q ss_pred CCCCEEEeCCCC--chhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCC--CCcEEEEcccCCCCC---CC--CCccc
Q 028385 7 GTRDTCRRAAPS--IVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSF---FE--DESFD 75 (210)
Q Consensus 7 ~~~~vLdiGcG~--G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~---~~--~~~fD 75 (210)
+..+|||||||+ +.++..+++. +..+|+++|.|+.|++.|+++.... .++.|+++|+.+.+. .+ .+.||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 445799999997 4444555443 5568999999999999999998654 369999999988520 11 34555
Q ss_pred -----EEEECCccchhccCCCchHH-HHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 76 -----AVIDKGTLDSLMCGTNAPIS-ASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 76 -----~Vi~~~~l~~~~~~~~~~~~-~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
.|+++.+|||+ +..+ +..+++++.+.|+|||+|++.+....
T Consensus 158 ~~~p~av~~~avLH~l-----~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 158 LTRPVALTVIAIVHFV-----LDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp TTSCCEEEEESCGGGS-----CGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred cCCcchHHhhhhHhcC-----CchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 68899999999 2222 68899999999999999999887653
No 150
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.57 E-value=6.1e-15 Score=113.63 Aligned_cols=99 Identities=16% Similarity=0.140 Sum_probs=82.9
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CC-CcEEEEeCCHHHHHHHHHhhcC-------CCCcEEEEcccCCCCCCCCCcccEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GY-EDIVNIDISSVAIDMMKMKYEE-------IPQLKYLQMDVRDMSFFEDESFDAV 77 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~-~~v~~vD~s~~~~~~a~~~~~~-------~~~v~~~~~d~~~~~~~~~~~fD~V 77 (210)
...+|||+|||+|..+..+++. +. .+|+++|+++.+++.++++... ..++.+.++|+...+ ..+++||+|
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~i 155 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY-AEEAPYDAI 155 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC-GGGCCEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc-ccCCCcCEE
Confidence 4468999999999999999876 32 4899999999999999988643 357999999998765 456789999
Q ss_pred EECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 78 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 78 i~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
++...++++ ++++.++|||||.+++....
T Consensus 156 ~~~~~~~~~-------------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 156 HVGAAAPVV-------------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EECSBBSSC-------------CHHHHHTEEEEEEEEEEESC
T ss_pred EECCchHHH-------------HHHHHHhcCCCcEEEEEEec
Confidence 999888776 46889999999999887643
No 151
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.57 E-value=4.4e-15 Score=114.82 Aligned_cols=107 Identities=11% Similarity=0.056 Sum_probs=75.3
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCC-HHHHHHH---HHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEEC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDIS-SVAIDMM---KMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s-~~~~~~a---~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~ 80 (210)
..+|||||||+|.++..+++. +..+|+|+|+| +.|++.| +++.. ..+++.+.++|+.+++....+.+|.|.++
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~~ 104 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISIL 104 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEEe
Confidence 457999999999999999864 44589999999 7777776 65543 33689999999998761112556666655
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
+.+.+... ....+...++++++|+|||||.+++.
T Consensus 105 ~~~~~~~~--~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 105 FPWGTLLE--YVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp SCCHHHHH--HHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred CCCcHHhh--hhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 43322100 00012356899999999999999883
No 152
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.57 E-value=4.9e-15 Score=114.93 Aligned_cols=101 Identities=11% Similarity=0.121 Sum_probs=81.9
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCC-CCCCcccEEEECC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSF-FEDESFDAVIDKG 81 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~-~~~~~fD~Vi~~~ 81 (210)
...+|||+|||+|..+..+++. +..+|+++|+++.+++.|+++.+.. ++++++++|+.+... ..+++||+|++..
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 3468999999999999999984 3458999999999999999987432 489999999987531 1267999999754
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.. .....+++++.++|||||++++-.
T Consensus 151 ~~----------~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 151 AK----------AQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp TS----------SSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred cH----------HHHHHHHHHHHHhcCCCeEEEEee
Confidence 32 456779999999999999997743
No 153
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.57 E-value=1.1e-14 Score=114.01 Aligned_cols=112 Identities=10% Similarity=0.076 Sum_probs=84.9
Q ss_pred CCCCEEEeCCCCchhHHHHHHc---CCCcEEEEeCCHHHHHHHHHhhcCC-----C-C----------------------
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD---GYEDIVNIDISSVAIDMMKMKYEEI-----P-Q---------------------- 55 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~---~~~~v~~vD~s~~~~~~a~~~~~~~-----~-~---------------------- 55 (210)
...+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+++.... . +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 4468999999999999999875 2348999999999999999876433 1 1
Q ss_pred ---cE-------------EEEcccCCCCCC----CCCcccEEEECCccchhccC--CCchHHHHHHHHHHHHhccCCcEE
Q 028385 56 ---LK-------------YLQMDVRDMSFF----EDESFDAVIDKGTLDSLMCG--TNAPISASQMLGEVSRLLKPGGIY 113 (210)
Q Consensus 56 ---v~-------------~~~~d~~~~~~~----~~~~fD~Vi~~~~l~~~~~~--~~~~~~~~~~l~~i~r~LkpgG~~ 113 (210)
++ +.++|+.+.... ..++||+|+++..+.+...- .........+++++.++|||||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 66 999998774201 34589999998776543110 112467889999999999999999
Q ss_pred EEEEc
Q 028385 114 MLITY 118 (210)
Q Consensus 114 ~~~~~ 118 (210)
+++..
T Consensus 211 ~~~~~ 215 (250)
T 1o9g_A 211 AVTDR 215 (250)
T ss_dssp EEEES
T ss_pred EEeCc
Confidence 88543
No 154
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.57 E-value=1.4e-14 Score=118.96 Aligned_cols=103 Identities=12% Similarity=0.075 Sum_probs=81.7
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC---CCCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE---IPQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~---~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
.+..+|||||||+|.++..+++. +..+++++|++ .++. +++.+. .++++++.+|+. .+ ++ +||+|++..
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~-~~-~p--~~D~v~~~~ 255 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFL-RE-VP--HADVHVLKR 255 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTT-TC-CC--CCSEEEEES
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCC-CC-CC--CCcEEEEeh
Confidence 34568999999999999999886 44579999994 4444 322221 257999999997 34 55 899999999
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
++|++ +..+..+++++++++|||||++++.+...
T Consensus 256 vlh~~-----~d~~~~~~L~~~~~~LkpgG~l~i~e~~~ 289 (348)
T 3lst_A 256 ILHNW-----GDEDSVRILTNCRRVMPAHGRVLVIDAVV 289 (348)
T ss_dssp CGGGS-----CHHHHHHHHHHHHHTCCTTCEEEEEECCB
T ss_pred hccCC-----CHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 99998 44555899999999999999999988653
No 155
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.57 E-value=1.5e-14 Score=107.20 Aligned_cols=97 Identities=13% Similarity=0.109 Sum_probs=81.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
...+|||+|||+|.++..+++ +..+++++|+|+.+++.++++.... +++++.++|+.+ + +++++||+|++..+ +
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~-~~~~~~D~i~~~~~-~ 110 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-V-LDKLEFNKAFIGGT-K 110 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-H-GGGCCCSEEEECSC-S
T ss_pred CCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-c-ccCCCCcEEEECCc-c
Confidence 446899999999999999998 5559999999999999999987433 679999999988 5 66789999999876 2
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+...+++++.++ |||.+++....
T Consensus 111 ----------~~~~~l~~~~~~--~gG~l~~~~~~ 133 (183)
T 2yxd_A 111 ----------NIEKIIEILDKK--KINHIVANTIV 133 (183)
T ss_dssp ----------CHHHHHHHHHHT--TCCEEEEEESC
T ss_pred ----------cHHHHHHHHhhC--CCCEEEEEecc
Confidence 346788888888 99999888754
No 156
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.56 E-value=6.2e-15 Score=119.54 Aligned_cols=97 Identities=14% Similarity=0.034 Sum_probs=82.3
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCC--CcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGY--EDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
...+|||+|||+|.++..+++.+. .+|+++|+|+.+++.|+++.+ ..+++++.++|+.+.+ ..+++||+|++..+
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~-~~~~~fD~Iv~~~~ 153 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV-PEFSPYDVIFVTVG 153 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEECSB
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcc-ccCCCeEEEEEcCC
Confidence 446899999999999999988733 359999999999999999874 3367999999998865 45678999999999
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
++|+ . +++.++|||||++++..
T Consensus 154 ~~~~-------~------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 154 VDEV-------P------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp BSCC-------C------HHHHHHEEEEEEEEEEB
T ss_pred HHHH-------H------HHHHHhcCCCcEEEEEE
Confidence 9998 2 57889999999998774
No 157
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.56 E-value=2e-15 Score=124.55 Aligned_cols=97 Identities=21% Similarity=0.202 Sum_probs=79.8
Q ss_pred CCCCEEEeCCC------CchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCC------CC
Q 028385 7 GTRDTCRRAAP------SIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFE------DE 72 (210)
Q Consensus 7 ~~~~vLdiGcG------~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~------~~ 72 (210)
...+||||||| +|..+..+++. +..+|+|+|+|+.|. ...++++|+++|+.+++ +. ++
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-------~~~~rI~fv~GDa~dlp-f~~~l~~~d~ 287 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-------VDELRIRTIQGDQNDAE-FLDRIARRYG 287 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-------GCBTTEEEEECCTTCHH-HHHHHHHHHC
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-------hcCCCcEEEEecccccc-hhhhhhcccC
Confidence 34689999999 66667677654 456899999999973 12378999999999987 66 68
Q ss_pred cccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 73 SFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 73 ~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+||+|++... |+. .+..+++++++++|||||++++.++.
T Consensus 288 sFDlVisdgs-H~~-------~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 288 PFDIVIDDGS-HIN-------AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CEEEEEECSC-CCH-------HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CccEEEECCc-ccc-------hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 9999999754 566 78899999999999999999988754
No 158
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.56 E-value=9.6e-15 Score=120.00 Aligned_cols=100 Identities=14% Similarity=0.116 Sum_probs=84.1
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
+..+|||||||+|.++..+++. +..+++++|+ +.+++.+++. ++++++.+|+.+ + ++. ||+|++..++||
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~v~~~~~d~~~-~-~p~--~D~v~~~~~lh~ 258 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----NNLTYVGGDMFT-S-IPN--ADAVLLKYILHN 258 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----TTEEEEECCTTT-C-CCC--CSEEEEESCGGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----CCcEEEeccccC-C-CCC--ccEEEeehhhcc
Confidence 3468999999999999999876 4458999999 9998877652 569999999976 5 553 999999999999
Q ss_pred hccCCCchHHHHHHHHHHHHhccC---CcEEEEEEcCC
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKP---GGIYMLITYGD 120 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~Lkp---gG~~~~~~~~~ 120 (210)
+ +.....+++++++++||| ||++++.+...
T Consensus 259 ~-----~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 259 W-----TDKDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp S-----CHHHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred C-----CHHHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 8 334455999999999999 99999988653
No 159
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.56 E-value=4.8e-15 Score=116.60 Aligned_cols=100 Identities=14% Similarity=0.137 Sum_probs=82.7
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
...+|||+|||+|.++..+++.+. +|+++|+++.+++.++++.... ..+++.++|+.+. +++++||+|+++...+
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~--~~~~~fD~Vv~n~~~~- 195 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA--LPFGPFDLLVANLYAE- 195 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH--GGGCCEEEEEEECCHH-
T ss_pred CCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc--CcCCCCCEEEECCcHH-
Confidence 346899999999999999999877 9999999999999999987432 1289999998762 3467899999976544
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
....++.++.++|||||++++..+.
T Consensus 196 ---------~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 196 ---------LHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp ---------HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ---------HHHHHHHHHHHHcCCCCEEEEEeec
Confidence 3478899999999999999887654
No 160
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.56 E-value=6.4e-15 Score=121.93 Aligned_cols=100 Identities=16% Similarity=0.167 Sum_probs=83.9
Q ss_pred CCCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
.+..+|||||||+|.++..+++. +..+++++|+ +.+++.+++ .++++++.+|+.+ + ++. ||+|++..++|
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~-~~~--~D~v~~~~~lh 278 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP----LSGIEHVGGDMFA-S-VPQ--GDAMILKAVCH 278 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----CTTEEEEECCTTT-C-CCC--EEEEEEESSGG
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh----cCCCEEEeCCccc-C-CCC--CCEEEEecccc
Confidence 34578999999999999999887 3457899999 998887654 2679999999987 6 665 99999999999
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
|+ +.....+++++++++|||||++++.++.
T Consensus 279 ~~-----~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 279 NW-----SDEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp GS-----CHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cC-----CHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 98 3344559999999999999999998754
No 161
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.56 E-value=8.2e-15 Score=124.97 Aligned_cols=101 Identities=15% Similarity=0.133 Sum_probs=85.1
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
...+|||||||+|.++..+++.+..+|+++|+|+ +++.|+++.+. . ++++++.+|+.+++ ++ ++||+|++..++
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~-~~-~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS-LP-EQVDIIISEPMG 234 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-CS-SCEEEEECCCCH
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc-cC-CCeEEEEEeCch
Confidence 3468999999999999999988777999999998 99999887643 2 67999999999876 54 589999998887
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEE
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYML 115 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~ 115 (210)
+++ ..+.....+.++.++|||||.+++
T Consensus 235 ~~~-----~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 235 YML-----FNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHH-----TCHHHHHHHHHGGGGEEEEEEEES
T ss_pred Hhc-----CcHHHHHHHHHHHHhcCCCCEEEE
Confidence 776 335667788899999999999974
No 162
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.55 E-value=9.3e-15 Score=120.64 Aligned_cols=101 Identities=16% Similarity=0.162 Sum_probs=80.6
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
...|||||||+|.++...++.|.++|+++|.|+ |++.|++..+. . .+++++.+|++++. ++ ++||+|++-..-.
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~-lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE-LP-EQVDAIVSEWMGY 160 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC-CS-SCEEEEECCCCBT
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec-CC-ccccEEEeecccc
Confidence 347999999999999999999888999999996 78888877642 2 57999999999987 65 6899999843322
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEE
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYML 115 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~ 115 (210)
.+ .....+..++....|+|||||.++-
T Consensus 161 ~l----~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 161 GL----LHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TB----TTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cc----cccchhhhHHHHHHhhCCCCceECC
Confidence 21 1225678889999999999998754
No 163
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.55 E-value=2.7e-14 Score=111.63 Aligned_cols=111 Identities=15% Similarity=0.141 Sum_probs=80.7
Q ss_pred CCCCEEEeCCCCchhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhc----------CCCCcEEEEcccCC-CC-CCCCCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYE----------EIPQLKYLQMDVRD-MS-FFEDES 73 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~----------~~~~v~~~~~d~~~-~~-~~~~~~ 73 (210)
...+|||||||+|.++..+++.+ ..+++|+|+|+.+++.++++.. ..+++.++++|+.+ ++ .++.++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 34579999999999999999874 4489999999999999988753 34689999999987 43 256789
Q ss_pred ccEEEECCccchhccC-CCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 74 FDAVIDKGTLDSLMCG-TNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 74 fD~Vi~~~~l~~~~~~-~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+|.|+....--+.-.. ...+.....+++++.++|||||.+++.+
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 9999853221110000 0000001589999999999999998865
No 164
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.55 E-value=1.8e-14 Score=112.91 Aligned_cols=102 Identities=7% Similarity=0.063 Sum_probs=82.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCC-CCCCC-CCcccEEEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRD-MSFFE-DESFDAVID 79 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~-~~~~~-~~~fD~Vi~ 79 (210)
...+|||||||+|..+..+++. + ..+|+++|+++.+++.|+++... . +++++.++|+.+ ++.+. .++||+|++
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 3468999999999999999986 2 45899999999999999998742 2 479999999977 33122 348999998
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
.... .....+++++.++|||||++++.+.
T Consensus 143 d~~~----------~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 143 DADK----------PNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CSCG----------GGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CCch----------HHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 6532 5567899999999999999987654
No 165
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.55 E-value=4.3e-14 Score=109.45 Aligned_cols=104 Identities=13% Similarity=-0.006 Sum_probs=77.0
Q ss_pred CCCCCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCC--CCCCcccEEEEC
Q 028385 5 STGTRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF--FEDESFDAVIDK 80 (210)
Q Consensus 5 ~~~~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~--~~~~~fD~Vi~~ 80 (210)
.....+|||+|||+|.++..+++. +..+|+++|+|+.|++.+.+..+...|+.++++|+..... ...++||+|++.
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEec
Confidence 344578999999999999999875 3458999999999876554443333789999999987431 224689999987
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
... . .....+...+.++|||||++++..
T Consensus 154 ~a~--~-------~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 154 IAQ--P-------DQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp CCC--T-------THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCC--h-------hHHHHHHHHHHHhCCCCeEEEEEE
Confidence 543 1 334445566777999999998764
No 166
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.55 E-value=1.7e-14 Score=115.77 Aligned_cols=105 Identities=18% Similarity=0.241 Sum_probs=80.0
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc-------CCCCcEEEEcccCCCCCCCCCcccEEEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE-------EIPQLKYLQMDVRDMSFFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~-------~~~~v~~~~~d~~~~~~~~~~~fD~Vi~ 79 (210)
..+|||||||+|.++..+++. +..+|+++|+++.+++.|+++.. ..++++++.+|+.......+++||+|++
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~ 163 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEE
Confidence 468999999999999999987 45689999999999999999863 1368999999998742145689999999
Q ss_pred CCccchhccCCCchHHH--HHHHHHHHHhccCCcEEEEEE
Q 028385 80 KGTLDSLMCGTNAPISA--SQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~--~~~l~~i~r~LkpgG~~~~~~ 117 (210)
...-... +.... ..+++++.++|||||++++..
T Consensus 164 D~~~p~~-----~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 164 DCTDPIG-----PGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CC---------------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCccC-----cchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 6543211 11122 679999999999999998765
No 167
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.55 E-value=7e-15 Score=113.38 Aligned_cols=99 Identities=15% Similarity=0.226 Sum_probs=81.0
Q ss_pred CCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcC--C--CCcEEEEcccCCC-CCCCCCcccEEEECC
Q 028385 9 RDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEE--I--PQLKYLQMDVRDM-SFFEDESFDAVIDKG 81 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~--~--~~v~~~~~d~~~~-~~~~~~~fD~Vi~~~ 81 (210)
.+|||+|||+|..+..+++. +..+|+++|+++.+++.|+++.+. . ++++++++|+.+. +.+++++||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 48999999999999999885 245899999999999999998743 2 3799999998774 224478999999865
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.. .+...+++++.++|||||++++-+
T Consensus 138 ~~----------~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 138 SP----------MDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CT----------TTHHHHHHHHHHHEEEEEEEEETT
T ss_pred cH----------HHHHHHHHHHHHHcCCCcEEEEeC
Confidence 42 445678999999999999998743
No 168
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.55 E-value=6.1e-15 Score=117.62 Aligned_cols=97 Identities=14% Similarity=0.134 Sum_probs=74.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcE-EEEcccCCCC--CCCCCcccEEEECCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLK-YLQMDVRDMS--FFEDESFDAVIDKGTL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~-~~~~d~~~~~--~~~~~~fD~Vi~~~~l 83 (210)
...+|||+|||||.++..+++.+..+|+|+|+|+.|++.+.++. +++. +...|+..++ .++..+||+|++..++
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~---~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf 161 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD---DRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSF 161 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC---TTEEEECSCCGGGCCGGGCTTCCCSEEEECCSS
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---cccceecccCceecchhhCCCCCCCEEEEEeeH
Confidence 34589999999999999999988779999999999999865432 3332 2234444433 1345569999998877
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
+++ ..++.+++|+|||||.++++
T Consensus 162 ~sl----------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 162 ISL----------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp SCG----------GGTHHHHHHHSCTTCEEEEE
T ss_pred hhH----------HHHHHHHHHHcCcCCEEEEE
Confidence 654 67899999999999999887
No 169
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.55 E-value=1.4e-14 Score=112.47 Aligned_cols=98 Identities=13% Similarity=0.110 Sum_probs=79.9
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCcEEEEcccCCCCCCCCC-cccEEEECCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDE-SFDAVIDKGTL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~-~fD~Vi~~~~l 83 (210)
...+|||+|||+|.++..+++....+|+++|+++.+++.|+++.+. ..++++..+|+ ..+ ++++ .||+|++..++
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~-~~~~~~fD~Ii~~~~~ 168 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKG-FPPKAPYDVIIVTAGA 168 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGC-CGGGCCEEEEEECSBB
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccC-CCCCCCccEEEECCcH
Confidence 4468999999999999999887425899999999999999998743 35799999998 333 4444 59999999999
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+++ . +++.++|||||++++....
T Consensus 169 ~~~-------~------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 169 PKI-------P------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp SSC-------C------HHHHHTEEEEEEEEEEECS
T ss_pred HHH-------H------HHHHHhcCCCcEEEEEEec
Confidence 887 2 3789999999999877643
No 170
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.55 E-value=3e-15 Score=110.03 Aligned_cols=106 Identities=16% Similarity=0.179 Sum_probs=79.2
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC-CcEEEEcccCCC-CCC--CCCcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDM-SFF--EDESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~v~~~~~d~~~~-~~~--~~~~fD~Vi~~~~ 82 (210)
...+|||+|||+|.++..+++.+. +++++|+|+.+++.|+++..... ++++.++|+.+. +.. ..++||+|++..+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 119 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPP 119 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCC
Confidence 345899999999999999999876 59999999999999998874322 789999998873 211 1348999999876
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
++ - ......+.+.+ .++|||||.+++.....
T Consensus 120 ~~-~-----~~~~~~~~~~~-~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 120 YA-M-----DLAALFGELLA-SGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp TT-S-----CTTHHHHHHHH-HTCEEEEEEEEEEEETT
T ss_pred Cc-h-----hHHHHHHHHHh-hcccCCCcEEEEEeCCc
Confidence 64 1 11233333333 49999999998876544
No 171
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.54 E-value=1.1e-14 Score=114.13 Aligned_cols=100 Identities=10% Similarity=0.135 Sum_probs=84.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcC---CCCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEE---IPQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~---~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
...+|||+|||+|.++..+++. + ..+++++|+++.+++.|+++.+. .+++++..+|+.+.+ +++++||+|++.
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~-~~~~~~D~v~~~- 173 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE-LEEAAYDGVALD- 173 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC-CCTTCEEEEEEE-
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC-CCCCCcCEEEEC-
Confidence 4468999999999999999987 3 45899999999999999988642 368999999999887 778899999972
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
. .+...+++++.++|||||.+++....
T Consensus 174 ----~-------~~~~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 174 ----L-------MEPWKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp ----S-------SCGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred ----C-------cCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 2 34557899999999999999888754
No 172
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.54 E-value=1.1e-14 Score=117.49 Aligned_cols=106 Identities=17% Similarity=0.133 Sum_probs=81.7
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc------CCCCcEEEEcccCCCCC-CCCCcccEEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE------EIPQLKYLQMDVRDMSF-FEDESFDAVI 78 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~------~~~~v~~~~~d~~~~~~-~~~~~fD~Vi 78 (210)
...+|||||||+|.++..+++. +..+++++|+++.+++.|+++.. ..++++++.+|+.+... ..+++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 3468999999999999999987 45689999999999999998762 23689999999987541 1478999999
Q ss_pred ECCccchhccCCCchHHH--HHHHHHHHHhccCCcEEEEEE
Q 028385 79 DKGTLDSLMCGTNAPISA--SQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~--~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+....++. +.... .+++++++++|||||++++..
T Consensus 175 ~d~~~~~~-----~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 175 IDTTDPAG-----PASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EECC--------------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCccc-----cchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 96654332 11111 688999999999999998765
No 173
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.54 E-value=2.9e-14 Score=104.94 Aligned_cols=105 Identities=18% Similarity=0.171 Sum_probs=80.3
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCC-------CCCCcccEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF-------FEDESFDAV 77 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-------~~~~~fD~V 77 (210)
...+|||+|||+|.++..+++. + ..+++++|+++ +++. +++++.++|+.+.+. +++++||+|
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i 92 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------VGVDFLQGDFRDELVMKALLERVGDSKVQVV 92 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------TTEEEEESCTTSHHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------CcEEEEEcccccchhhhhhhccCCCCceeEE
Confidence 3458999999999999999887 3 35899999999 6532 678999999987530 356799999
Q ss_pred EECCccchhccCCCchHH------HHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 78 IDKGTLDSLMCGTNAPIS------ASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 78 i~~~~l~~~~~~~~~~~~------~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
+++.++++... ..... ...+++++.++|||||.+++..+..+.
T Consensus 93 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 93 MSDMAPNMSGT--PAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp EECCCCCCCSC--HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT
T ss_pred EECCCccccCC--CccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc
Confidence 99888776410 01111 168999999999999999988776543
No 174
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.53 E-value=3.8e-14 Score=118.87 Aligned_cols=103 Identities=9% Similarity=-0.023 Sum_probs=81.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHH-------HHhhc--C--CCCcEEEEcccCCCC-CC--CC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMM-------KMKYE--E--IPQLKYLQMDVRDMS-FF--ED 71 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a-------~~~~~--~--~~~v~~~~~d~~~~~-~~--~~ 71 (210)
...+|||+|||+|.++..+++. +..+|+|+|+++.+++.| +++.. + ..+++++++|....+ .+ ..
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~ 321 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELI 321 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHG
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccccc
Confidence 4568999999999999999986 555799999999999988 66653 2 358999987654221 01 24
Q ss_pred CcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 72 ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 72 ~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
++||+|+++..+ +. .+...+++++.++|||||.+++.+
T Consensus 322 ~~FDvIvvn~~l-~~-------~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 322 PQCDVILVNNFL-FD-------EDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp GGCSEEEECCTT-CC-------HHHHHHHHHHHTTCCTTCEEEESS
T ss_pred CCCCEEEEeCcc-cc-------ccHHHHHHHHHHhCCCCeEEEEee
Confidence 689999987665 23 677888999999999999998874
No 175
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.53 E-value=4.3e-14 Score=112.34 Aligned_cols=109 Identities=11% Similarity=0.156 Sum_probs=84.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
...+|||+|||+|.++..+++. +..+++++|+|+.+++.++++.. ..++++++++|+.+. +++++||+|+++..+
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~--~~~~~fD~Iv~npPy 186 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA--LAGQQFAMIVSNPPY 186 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG--GTTCCEEEEEECCCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh--cccCCccEEEECCCC
Confidence 3468999999999999999865 55689999999999999999874 335799999999773 446789999998554
Q ss_pred chhc------------------cCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 84 DSLM------------------CGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 84 ~~~~------------------~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.... .+..+......+++++.++|||||++++..
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3210 000112467889999999999999997754
No 176
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.53 E-value=2.6e-14 Score=115.21 Aligned_cols=109 Identities=15% Similarity=0.188 Sum_probs=84.3
Q ss_pred CCCEEEeCCCCchhHHHHHH-cCCCcEEEEeCCHHHHHHHHHhhcC--CCCcEEEEcccCCCC-CCCCCcccEEEECCcc
Q 028385 8 TRDTCRRAAPSIVMSEDMVK-DGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMS-FFEDESFDAVIDKGTL 83 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~--~~~v~~~~~d~~~~~-~~~~~~fD~Vi~~~~l 83 (210)
..+|||||||+|.++..+++ .+..+++++|+++.+++.|+++... .++++++.+|+.... .+++++||+|++....
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 45899999999999999998 4555899999999999999998853 368999999998742 2457899999986433
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+.. ....-...+++++++++|||||++++....
T Consensus 170 ~~~---~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 170 GAI---TPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp TSC---CCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ccc---cchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 211 000011268999999999999999876643
No 177
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.53 E-value=7.6e-14 Score=105.53 Aligned_cols=96 Identities=19% Similarity=0.224 Sum_probs=75.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...+|||+|||+|.++..+++.+..+++++|+|+.+++.++++.. +++++++|+.+++ ++||+|+++.++++.
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~---~~~~~~~d~~~~~----~~~D~v~~~~p~~~~ 123 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG---GVNFMVADVSEIS----GKYDTWIMNPPFGSV 123 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT---TSEEEECCGGGCC----CCEEEEEECCCC---
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC---CCEEEECcHHHCC----CCeeEEEECCCchhc
Confidence 446899999999999999998866579999999999999999874 7899999998754 689999999999887
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
......++++++.+++ |+.+++.
T Consensus 124 -----~~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 124 -----VKHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp ---------CHHHHHHHHHHE--EEEEEEE
T ss_pred -----cCchhHHHHHHHHHhc--CcEEEEE
Confidence 1122357899999998 5544333
No 178
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.53 E-value=1.3e-14 Score=112.08 Aligned_cols=97 Identities=14% Similarity=0.099 Sum_probs=81.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-C------CCcEEEEeCCHHHHHHHHHhhcC-------CCCcEEEEcccCCCCCCCC-
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-G------YEDIVNIDISSVAIDMMKMKYEE-------IPQLKYLQMDVRDMSFFED- 71 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~------~~~v~~vD~s~~~~~~a~~~~~~-------~~~v~~~~~d~~~~~~~~~- 71 (210)
...+|||+|||+|.++..+++. + ..+|+++|+++.+++.++++... .+++++..+|+.+ + +++
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~-~~~~ 161 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-G-YPPN 161 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-C-CGGG
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-C-CCcC
Confidence 3468999999999999999875 3 14899999999999999988643 3589999999987 3 444
Q ss_pred CcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 72 ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 72 ~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
++||+|++...++++ .+++.++|||||++++...
T Consensus 162 ~~fD~I~~~~~~~~~-------------~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 162 APYNAIHVGAAAPDT-------------PTELINQLASGGRLIVPVG 195 (227)
T ss_dssp CSEEEEEECSCBSSC-------------CHHHHHTEEEEEEEEEEES
T ss_pred CCccEEEECCchHHH-------------HHHHHHHhcCCCEEEEEEe
Confidence 789999999999887 3788999999999987653
No 179
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.52 E-value=1.8e-14 Score=114.40 Aligned_cols=100 Identities=16% Similarity=0.232 Sum_probs=84.1
Q ss_pred CCCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcC-----CCCcEEEEcccCCCCCCCCCcccEEEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEE-----IPQLKYLQMDVRDMSFFEDESFDAVID 79 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~-----~~~v~~~~~d~~~~~~~~~~~fD~Vi~ 79 (210)
...+|||+|||+|.++..+++. +..+++++|+++.+++.|+++... .+++++.++|+.+.+ +++++||+|++
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~-~~~~~~D~v~~ 177 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE-LPDGSVDRAVL 177 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC-CCTTCEEEEEE
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC-CCCCceeEEEE
Confidence 4458999999999999999985 345899999999999999988732 368999999999887 77889999997
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
. + .+...+++++.++|||||.+++....
T Consensus 178 ~-----~-------~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 178 D-----M-------LAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp E-----S-------SCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred C-----C-------cCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3 2 34457899999999999999887754
No 180
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.51 E-value=3.5e-14 Score=109.10 Aligned_cols=102 Identities=14% Similarity=0.122 Sum_probs=81.2
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhc--CC-CCcEEEEcccCCCC-CCC---CCcccEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYE--EI-PQLKYLQMDVRDMS-FFE---DESFDAV 77 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~--~~-~~v~~~~~d~~~~~-~~~---~~~fD~V 77 (210)
...+|||+|||+|..+..+++. + ..+++++|+++.+++.|+++.. .. ++++++++|+.+.. .+. .++||+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 3468999999999999999987 2 4589999999999999998874 23 45999999987631 011 2679999
Q ss_pred EECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 78 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 78 i~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
++.... .....+++++.++|||||.+++.+.
T Consensus 138 ~~d~~~----------~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 138 FIDADK----------QNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp EECSCG----------GGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EEcCCc----------HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 986552 4567899999999999998877543
No 181
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.50 E-value=2.9e-13 Score=111.28 Aligned_cols=105 Identities=17% Similarity=0.109 Sum_probs=89.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC--CCCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~--~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
+..+|||||||+|.++..+++. +..+++..|. |.+++.++++.+. .++++++.+|+...+ .+ .+|+|+.+.+|
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~-~~--~~D~~~~~~vl 254 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDP-LP--EADLYILARVL 254 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSC-CC--CCSEEEEESSG
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCC-CC--CceEEEeeeec
Confidence 3457999999999999999886 5557888886 8899999988743 278999999998755 44 47999999999
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
|++ +.++..++|+++++.|+|||++++++...
T Consensus 255 h~~-----~d~~~~~iL~~~~~al~pgg~lli~e~~~ 286 (353)
T 4a6d_A 255 HDW-----ADGKCSHLLERIYHTCKPGGGILVIESLL 286 (353)
T ss_dssp GGS-----CHHHHHHHHHHHHHHCCTTCEEEEEECCC
T ss_pred ccC-----CHHHHHHHHHHHHhhCCCCCEEEEEEeee
Confidence 998 66777899999999999999999998753
No 182
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.50 E-value=4e-14 Score=115.48 Aligned_cols=105 Identities=17% Similarity=0.222 Sum_probs=82.2
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC------CCCcEEEEcccCCC-CCCCCCcccEEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE------IPQLKYLQMDVRDM-SFFEDESFDAVI 78 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~-~~~~~~~fD~Vi 78 (210)
...+|||||||+|.++..+++. +..+|+++|+|+.+++.|+++... .++++++++|+.+. +.+++++||+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 3468999999999999999987 446899999999999999998742 26899999998764 214467899999
Q ss_pred ECCccchhccCCCchHH--HHHHHHHHHHhccCCcEEEEE
Q 028385 79 DKGTLDSLMCGTNAPIS--ASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 79 ~~~~l~~~~~~~~~~~~--~~~~l~~i~r~LkpgG~~~~~ 116 (210)
+......- .... ...+++++.++|||||++++.
T Consensus 200 ~d~~~p~~-----~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 200 VDSSDPIG-----PAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp ECCCCTTS-----GGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCCccC-----cchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 86542110 0011 478999999999999999775
No 183
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.50 E-value=2.5e-14 Score=109.05 Aligned_cols=98 Identities=9% Similarity=0.087 Sum_probs=79.8
Q ss_pred CCCEEEeCCCCchhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCC-CCCCCCcccEEEECC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDM-SFFEDESFDAVIDKG 81 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~-~~~~~~~fD~Vi~~~ 81 (210)
..+|||+|||+|..+..+++. + ..+|+++|+++.+++.|+++.+.. ++++++++|+.+. + ..++ ||+|++..
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAA-GQRD-IDILFMDC 134 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHT-TCCS-EEEEEEET
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhc-cCCC-CCEEEEcC
Confidence 468999999999999999886 2 458999999999999999887422 4689999999764 4 3456 99999763
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
. . .+...+++++.++|||||.+++.+
T Consensus 135 ~---~-------~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 D---V-------FNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp T---T-------SCHHHHHHHHGGGEEEEEEEEEES
T ss_pred C---h-------hhhHHHHHHHHHhcCCCeEEEEEC
Confidence 2 1 456789999999999999997754
No 184
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.50 E-value=2.9e-14 Score=109.65 Aligned_cols=102 Identities=11% Similarity=0.100 Sum_probs=81.7
Q ss_pred CCCEEEeCCCCchhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCC-CCCC----CCcccEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDM-SFFE----DESFDAV 77 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~-~~~~----~~~fD~V 77 (210)
..+|||+|||+|..+..+++. + ..+|+++|+++.+++.|+++.+. . ++++++++|+.+. +.+. .++||+|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 458999999999999999986 2 45899999999999999998743 2 4699999998653 2111 1789999
Q ss_pred EECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 78 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 78 i~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
++.... .+...+++++.++|||||++++.+..
T Consensus 145 ~~~~~~----------~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 145 YIDADK----------ANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EECSCG----------GGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EECCCH----------HHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 975432 56788999999999999999886543
No 185
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.50 E-value=1.8e-14 Score=112.18 Aligned_cols=98 Identities=9% Similarity=0.062 Sum_probs=77.7
Q ss_pred CCCEEEeCCCCchhHHHHHHc-----CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCC---CCCCCCcccEEEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-----GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM---SFFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-----~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~---~~~~~~~fD~Vi~ 79 (210)
..+|||||||+|..+..+++. +..+|+++|+|+.|++.|+.. .++++++++|+.+. +...+.+||+|++
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~---~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD---MENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG---CTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc---CCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 358999999999999999875 345899999999999888732 26899999999884 4123347999997
Q ss_pred CCccchhccCCCchHHHHHHHHHHHH-hccCCcEEEEEEc
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSR-LLKPGGIYMLITY 118 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r-~LkpgG~~~~~~~ 118 (210)
... | .+...++.++.+ +|||||++++.++
T Consensus 159 d~~--~--------~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 159 DNA--H--------ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp ESS--C--------SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CCc--h--------HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 654 2 245779999997 9999999988653
No 186
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.50 E-value=6.4e-14 Score=114.26 Aligned_cols=111 Identities=14% Similarity=0.076 Sum_probs=83.6
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CCC--CcEEEEcccCCCCCC---CCCcccEEEEC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EIP--QLKYLQMDVRDMSFF---EDESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~--~v~~~~~d~~~~~~~---~~~~fD~Vi~~ 80 (210)
..+|||+|||+|.++..+++.+. +|+++|+|+.+++.|+++.+ ... +++++++|+.+.... .+++||+|++.
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred CCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 35899999999999999999877 99999999999999999874 223 489999999874301 15689999996
Q ss_pred CccchhccC---CCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 81 GTLDSLMCG---TNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 81 ~~l~~~~~~---~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
......... .....+...+++++.++|||||.+++....
T Consensus 233 PP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 233 PPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp CCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 542111000 001267889999999999999997665533
No 187
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.50 E-value=2.8e-14 Score=115.62 Aligned_cols=107 Identities=20% Similarity=0.185 Sum_probs=83.8
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC-------CCCcEEEEcccCC-CCCCCCCcccEEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE-------IPQLKYLQMDVRD-MSFFEDESFDAVI 78 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~-------~~~v~~~~~d~~~-~~~~~~~~fD~Vi 78 (210)
..+|||||||+|.++..+++. +..+++++|+++.+++.|+++... .++++++.+|+.+ ++ ..+++||+|+
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~-~~~~~fD~Ii 156 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLE-RTEERYDVVI 156 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHH-HCCCCEEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHH-hcCCCccEEE
Confidence 468999999999999999987 456899999999999999987632 3689999999987 34 3567899999
Q ss_pred ECCccchhccCCCchHH--HHHHHHHHHHhccCCcEEEEEE
Q 028385 79 DKGTLDSLMCGTNAPIS--ASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 79 ~~~~l~~~~~~~~~~~~--~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+....+....+ +... ..+++++++++|||||++++..
T Consensus 157 ~d~~~~~~~~~--~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 157 IDLTDPVGEDN--PARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EECCCCBSTTC--GGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCcccccC--cchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 97654330000 1111 4789999999999999998764
No 188
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.49 E-value=3.3e-14 Score=109.56 Aligned_cols=99 Identities=12% Similarity=0.080 Sum_probs=81.1
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCC------CcEEEEeCCHHHHHHHHHhhcC-------CCCcEEEEcccCCCCC---CC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGY------EDIVNIDISSVAIDMMKMKYEE-------IPQLKYLQMDVRDMSF---FE 70 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~------~~v~~vD~s~~~~~~a~~~~~~-------~~~v~~~~~d~~~~~~---~~ 70 (210)
...+|||+|||+|.++..+++... .+|+++|+++.+++.|+++... ..++++..+|+.+... ..
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 346899999999999999988632 4899999999999999988642 3579999999887320 13
Q ss_pred CCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 71 DESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 71 ~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
.++||+|++...++++ ++++.++|||||++++...
T Consensus 160 ~~~fD~I~~~~~~~~~-------------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 160 LGLFDAIHVGASASEL-------------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HCCEEEEEECSBBSSC-------------CHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCEEEECCchHHH-------------HHHHHHhcCCCcEEEEEEc
Confidence 5689999999988876 5788999999999987753
No 189
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.49 E-value=3.2e-14 Score=110.17 Aligned_cols=100 Identities=12% Similarity=0.109 Sum_probs=82.1
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCC-CCCC--CCcccEEEEC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDM-SFFE--DESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~-~~~~--~~~fD~Vi~~ 80 (210)
..+|||+|||+|..+..+++. +..+|+++|+++.+++.|+++.... +++.+.++|+.+. + .. +++||+|++.
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGE-KLELYPLFDVLFID 133 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHH-HHTTSCCEEEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH-hcccCCCccEEEEC
Confidence 458999999999999999887 3458999999999999999987432 4699999999874 3 22 5789999986
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
... .+...+++++.++|||||.+++.+.
T Consensus 134 ~~~----------~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 134 AAK----------GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp GGG----------SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CCH----------HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 553 3567899999999999999987643
No 190
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.49 E-value=1.1e-13 Score=112.21 Aligned_cols=112 Identities=13% Similarity=0.099 Sum_probs=84.9
Q ss_pred CCCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
...+|||+|||+|..+..+++. +..+|+++|+|+.+++.++++.+ ...++.++++|+.+++ ..+++||+|++...
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~-~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG-ELNVEFDKILLDAP 196 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG-GGCCCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcc-cccccCCEEEEeCC
Confidence 3468999999999999999875 33589999999999999999874 3357999999999876 44678999998533
Q ss_pred cchhc-cCCCc-------h-------HHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 83 LDSLM-CGTNA-------P-------ISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 83 l~~~~-~~~~~-------~-------~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
..... ....+ . ....++++++.++|||||++++.+++
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 21110 00000 0 12368999999999999999988775
No 191
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.49 E-value=7.9e-14 Score=109.26 Aligned_cols=99 Identities=17% Similarity=0.192 Sum_probs=82.1
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhc--CCC-CcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYE--EIP-QLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~--~~~-~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
...+|||+|||+|.++..+++. + ..+++++|+++.+++.|+++.+ ..+ ++++.++|+.+. +++++||+|++.
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~~- 169 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG--IEEENVDHVILD- 169 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC--CCCCSEEEEEEC-
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc--cCCCCcCEEEEC-
Confidence 4468999999999999999987 3 5589999999999999999874 233 499999999864 577889999973
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
. .+...+++++.++|||||.+++....
T Consensus 170 ----~-------~~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 170 ----L-------PQPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp ----S-------SCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred ----C-------CCHHHHHHHHHHHcCCCCEEEEEECC
Confidence 2 34467899999999999999887643
No 192
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.49 E-value=9.9e-14 Score=104.79 Aligned_cols=102 Identities=12% Similarity=0.219 Sum_probs=76.1
Q ss_pred CCCEEEeCCCCchhHHHHHHc-C--CCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-----------------
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-G--YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----------------- 67 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~--~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~----------------- 67 (210)
..+|||+|||+|.++..+++. + ..+|+|+|+|+.+ ..+++.+.++|+.+.+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~ 93 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNS 93 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------CCTTCEEEECCTTTTSSCCC-----------CH
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------CCCCceEEEccccchhhhhhccccccccccchh
Confidence 358999999999999999886 3 4589999999831 2367899999998753
Q ss_pred -------CCCCCcccEEEECCccchhccCCCchH------HHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 68 -------FFEDESFDAVIDKGTLDSLMCGTNAPI------SASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 68 -------~~~~~~fD~Vi~~~~l~~~~~~~~~~~------~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
.+++++||+|++...+++.. ..... ....+++++.++|||||.+++..+..
T Consensus 94 ~~~~~~~~~~~~~fD~v~~~~~~~~~g--~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 94 VDYKLKEILQDKKIDIILSDAAVPCIG--NKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCCCCCS--CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred hHHHHHhhcCCCcccEEEeCCCcCCCC--CcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 03567999999988766520 00001 12358999999999999998876654
No 193
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.49 E-value=3.9e-13 Score=101.30 Aligned_cols=103 Identities=16% Similarity=0.212 Sum_probs=76.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCC-----------CCccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFE-----------DESFD 75 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~-----------~~~fD 75 (210)
...+|||+|||+|.++..+++. ..+|+|+|+++. ...++++++++|+.+.+ .. .++||
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~---------~~~~~v~~~~~D~~~~~-~~~~~~~~~~~~~~~~~D 93 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEM---------EEIAGVRFIRCDIFKET-IFDDIDRALREEGIEKVD 93 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCC---------CCCTTCEEEECCTTSSS-HHHHHHHHHHHHTCSSEE
T ss_pred CCCEEEEEeecCCHHHHHHHHc-CCcEEEEecccc---------ccCCCeEEEEccccCHH-HHHHHHHHhhcccCCcce
Confidence 3468999999999999999988 448999999974 12368999999998754 11 14899
Q ss_pred EEEECCccchhccCC------CchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 76 AVIDKGTLDSLMCGT------NAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 76 ~Vi~~~~l~~~~~~~------~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
+|++....... +. ........+++.+.++|||||.|++..+..+.
T Consensus 94 ~Vlsd~~~~~~--g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~ 144 (191)
T 3dou_A 94 DVVSDAMAKVS--GIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM 144 (191)
T ss_dssp EEEECCCCCCC--SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH
T ss_pred EEecCCCcCCC--CCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC
Confidence 99997543211 00 01123567899999999999999988876655
No 194
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.49 E-value=8e-14 Score=110.68 Aligned_cols=101 Identities=14% Similarity=0.078 Sum_probs=84.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
...+|||+|||+|.++..+++. +..+|+++|+++.+++.|+++.+ +..++.++++|+.+.+ . .++||+|++....
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~-~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVE-L-KDVADRVIMGYVH 196 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCC-C-TTCEEEEEECCCS
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcC-c-cCCceEEEECCcc
Confidence 4468999999999999999987 45589999999999999999874 3367899999998875 4 6789999986543
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+...++.++.+.|||||.+++.++..
T Consensus 197 -----------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 -----------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp -----------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred -----------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 34567889999999999998877643
No 195
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.49 E-value=2.2e-13 Score=105.05 Aligned_cols=119 Identities=8% Similarity=-0.016 Sum_probs=92.3
Q ss_pred CCCEEEeCCCCchhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
..+|||||||+|.++..+++.+ ..+|+++|+++.+++.|+++.+.. .++++.++|+.+.. .+++.||+|+..++.
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~-~~~~~~D~IviaGmG 100 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAF-EEADNIDTITICGMG 100 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC-CGGGCCCEEEEEEEC
T ss_pred CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcc-ccccccCEEEEeCCc
Confidence 3589999999999999999985 457999999999999999988533 46999999998865 444579998864432
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCchhhHhhhcccccceEEE
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKARMIHLKWKVYNWKIE 138 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~~~~~~~~~~~~~~~~~ 138 (210)
-.....++.+..+.|+++|+|++...........++. ..+|.+.
T Consensus 101 ---------g~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L~--~~Gf~i~ 144 (230)
T 3lec_A 101 ---------GRLIADILNNDIDKLQHVKTLVLQPNNREDDLRKWLA--ANDFEIV 144 (230)
T ss_dssp ---------HHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHH--HTTEEEE
T ss_pred ---------hHHHHHHHHHHHHHhCcCCEEEEECCCChHHHHHHHH--HCCCEEE
Confidence 2457888999999999999998877666555555542 3456654
No 196
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.49 E-value=5.2e-14 Score=114.27 Aligned_cols=104 Identities=14% Similarity=0.252 Sum_probs=82.4
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC------CCCcEEEEcccCCC-CCCCCCcccEEEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE------IPQLKYLQMDVRDM-SFFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~-~~~~~~~fD~Vi~ 79 (210)
..+|||||||+|.++..+++. +..+++++|+|+.+++.|+++... .++++++++|+.+. + ..+++||+|++
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~-~~~~~fDvIi~ 195 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE-NVTNTYDVIIV 195 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH-HCCSCEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHh-hcCCCceEEEE
Confidence 468999999999999999987 456899999999999999998754 36899999998763 3 34678999998
Q ss_pred CCccchhccCCCchHHH--HHHHHHHHHhccCCcEEEEEE
Q 028385 80 KGTLDSLMCGTNAPISA--SQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~--~~~l~~i~r~LkpgG~~~~~~ 117 (210)
... +++ + +.... .++++++.++|||||++++..
T Consensus 196 d~~-~p~--~--~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 196 DSS-DPI--G--PAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp ECC-CSS--S--GGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCc-CCC--C--cchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 643 111 0 11222 789999999999999998764
No 197
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.48 E-value=4.7e-14 Score=113.34 Aligned_cols=107 Identities=12% Similarity=0.169 Sum_probs=80.6
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC------CCCcEEEEcccCC-CCCCCCCcccEEEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE------IPQLKYLQMDVRD-MSFFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~-~~~~~~~~fD~Vi~ 79 (210)
..+|||+|||+|.++..+++. +..+|+++|+++.+++.|+++... .++++++.+|+.+ ++ ..+++||+|++
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~-~~~~~fD~Ii~ 169 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVR-KFKNEFDVIII 169 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGG-GCSSCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh-hCCCCceEEEE
Confidence 368999999999999999987 556899999999999999988632 3689999999877 34 34678999998
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
...-+++ +........++++++.++|||||++++..
T Consensus 170 d~~~~~~--~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 170 DSTDPTA--GQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EC------------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCccc--CchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 5432112 00000012688999999999999998764
No 198
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.48 E-value=1.1e-13 Score=113.96 Aligned_cols=99 Identities=14% Similarity=0.093 Sum_probs=82.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
+..+|||||||+|.++..+++. +..+++++|+ +.+++.+++ .++++++.+|+.+ + ++ .||+|+++.++|+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~-~~--~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----NENLNFVGGDMFK-S-IP--SADAVLLKWVLHD 263 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----CSSEEEEECCTTT-C-CC--CCSEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----CCCcEEEeCccCC-C-CC--CceEEEEcccccC
Confidence 3468999999999999999886 4458999999 788876654 3579999999987 6 66 4999999999999
Q ss_pred hccCCCchHHHHHHHHHHHHhccC---CcEEEEEEcC
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKP---GGIYMLITYG 119 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~Lkp---gG~~~~~~~~ 119 (210)
+ +.....+++++++++||| ||++++.++.
T Consensus 264 ~-----~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 264 W-----NDEQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp S-----CHHHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred C-----CHHHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 8 334455999999999999 9999998765
No 199
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.48 E-value=6e-14 Score=111.57 Aligned_cols=106 Identities=13% Similarity=0.140 Sum_probs=82.3
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc----C--CCCcEEEEcccCC-CCCCCCCcccEEEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE----E--IPQLKYLQMDVRD-MSFFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~----~--~~~v~~~~~d~~~-~~~~~~~~fD~Vi~ 79 (210)
..+|||||||+|.++..+++. +..+++++|+++.+++.|+++.. . .++++++.+|+.. ++ ..+++||+|++
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~-~~~~~fD~Ii~ 154 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIA-KSENQYDVIMV 154 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHH-TCCSCEEEEEE
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh-hCCCCeeEEEE
Confidence 468999999999999999987 56699999999999999998762 1 3689999999877 34 34678999999
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
....+.. . ...-...++++++.++|||||++++..
T Consensus 155 d~~~~~~-~--~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 155 DSTEPVG-P--AVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp SCSSCCS-C--CCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCCC-c--chhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 6543211 0 000012578999999999999997764
No 200
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.48 E-value=2.4e-13 Score=112.62 Aligned_cols=97 Identities=15% Similarity=0.192 Sum_probs=80.7
Q ss_pred CCCEEEeCCCCchhHHHHHHcCC-CcEEEEeCCHHHHHHHHHhhcC--CCCcEEEEcccCC-CCCCCCCcccEEEECCcc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGY-EDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRD-MSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~--~~~v~~~~~d~~~-~~~~~~~~fD~Vi~~~~l 83 (210)
..+|||+| |+|.++..+++.+. .+|+++|+|+.|++.|+++.+. ..+++++++|+.+ ++...+++||+|+++.++
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~ 251 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPE 251 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCS
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCC
Confidence 46899999 99999999988754 6899999999999999998742 3479999999998 651135689999998876
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEE
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIY 113 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~ 113 (210)
+.. ....+++++.++|||||.+
T Consensus 252 ~~~--------~~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 252 TLE--------AIRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp SHH--------HHHHHHHHHHHTBCSTTCE
T ss_pred chH--------HHHHHHHHHHHHcccCCeE
Confidence 653 3588999999999999954
No 201
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.48 E-value=1.7e-13 Score=106.75 Aligned_cols=99 Identities=10% Similarity=0.126 Sum_probs=81.9
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
...+|||+|||+|.++..+++. ..+++++|+++.+++.|+++... . +++++..+|+.+.. ++++.||+|++.
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~--- 165 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE-VPEGIFHAAFVD--- 165 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-CCTTCBSEEEEC---
T ss_pred CCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-cCCCcccEEEEC---
Confidence 4468999999999999999988 45899999999999999988743 2 57899999998753 367789999973
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
. .+...+++++.++|||||.+++....
T Consensus 166 --~-------~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 166 --V-------REPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp --S-------SCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred --C-------cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 2 34457799999999999999887753
No 202
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.47 E-value=4.9e-14 Score=113.61 Aligned_cols=106 Identities=16% Similarity=0.136 Sum_probs=80.7
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC------CCCcEEEEcccCC-CCCCCCCcccEEEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE------IPQLKYLQMDVRD-MSFFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~-~~~~~~~~fD~Vi~ 79 (210)
..+|||||||+|.++..+++. +..+++++|+++.+++.|+++... .++++++.+|+.+ ++ ..+++||+|++
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~-~~~~~fD~Ii~ 174 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMK-QNQDAFDVIIT 174 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH-TCSSCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHh-hCCCCceEEEE
Confidence 468999999999999999987 446899999999999999988642 3789999999876 34 45678999998
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
....+.. ........++++++.++|||||++++..
T Consensus 175 d~~~~~~---~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 175 DSSDPMG---PAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp ECC--------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCC---cchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 6543211 0000123578999999999999998765
No 203
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.47 E-value=4.7e-13 Score=101.57 Aligned_cols=99 Identities=17% Similarity=0.213 Sum_probs=79.3
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCC-CcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIP-QLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
...+|||+|||+|.++..+++.+..+++++|+|+.+++.++++..... +++++++|+.+++ ++||+|+++..+++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~----~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN----SRVDIVIMNPPFGS 124 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC----CCCSEEEECCCCSS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC----CCCCEEEEcCCCcc
Confidence 346899999999999999999876689999999999999999875432 7999999998865 38999999988776
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
. .......+++++.+++ |+.+ +..
T Consensus 125 ~-----~~~~~~~~l~~~~~~l--~~~~-~~~ 148 (207)
T 1wy7_A 125 Q-----RKHADRPFLLKAFEIS--DVVY-SIH 148 (207)
T ss_dssp S-----STTTTHHHHHHHHHHC--SEEE-EEE
T ss_pred c-----cCCchHHHHHHHHHhc--CcEE-EEE
Confidence 5 2233457788899988 5544 444
No 204
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.47 E-value=2e-13 Score=111.45 Aligned_cols=101 Identities=18% Similarity=0.205 Sum_probs=77.7
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CC-CcEEEEeCCHHHHHHHHHhhcC-------------CCCcEEEEcccCCCC-CCC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GY-EDIVNIDISSVAIDMMKMKYEE-------------IPQLKYLQMDVRDMS-FFE 70 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~-~~v~~vD~s~~~~~~a~~~~~~-------------~~~v~~~~~d~~~~~-~~~ 70 (210)
...+|||+|||+|.++..+++. +. .+|+++|+++.+++.|+++... ..++++..+|+.+.. .++
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~ 184 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK 184 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccC
Confidence 3458999999999999999986 43 5899999999999999998642 257999999998862 266
Q ss_pred CCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 71 DESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 71 ~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+++||+|++... ....++.++.++|||||.+++....
T Consensus 185 ~~~fD~V~~~~~------------~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 185 SLTFDAVALDML------------NPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp ---EEEEEECSS------------STTTTHHHHGGGEEEEEEEEEEESS
T ss_pred CCCeeEEEECCC------------CHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 778999998532 2233789999999999999877643
No 205
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.47 E-value=6.5e-14 Score=113.33 Aligned_cols=104 Identities=18% Similarity=0.220 Sum_probs=79.2
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC------CCCcEEEEcccCCC-CCCCCCcccEEEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE------IPQLKYLQMDVRDM-SFFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~-~~~~~~~fD~Vi~ 79 (210)
..+|||||||+|..+..+++. +..+++++|+++.+++.|+++... .++++++.+|+.+. + ..+++||+|++
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~-~~~~~fD~Ii~ 187 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLK-NHKNEFDVIIT 187 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHH-HCTTCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHH-hcCCCceEEEE
Confidence 468999999999999999987 456899999999999999998753 26799999998773 3 34678999998
Q ss_pred CCccchhccCCCchHHH--HHHHHHHHHhccCCcEEEEEE
Q 028385 80 KGTLDSLMCGTNAPISA--SQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~--~~~l~~i~r~LkpgG~~~~~~ 117 (210)
... +++ + +.... .++++++.++|||||++++..
T Consensus 188 d~~-~~~--~--~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSS-DPV--G--PAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC------------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCC-CCC--C--cchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 653 222 0 11111 788999999999999997653
No 206
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.47 E-value=6.6e-14 Score=111.79 Aligned_cols=105 Identities=12% Similarity=0.150 Sum_probs=82.7
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC------CCCcEEEEcccCCCCCCCCCcccEEEEC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE------IPQLKYLQMDVRDMSFFEDESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~~fD~Vi~~ 80 (210)
..+|||||||+|.++..+++. +..+++++|+++.+++.|+++... .++++++.+|+.+.....+++||+|++.
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 158 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVD 158 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEc
Confidence 468999999999999999887 356899999999999999998753 3689999999877320236789999985
Q ss_pred CccchhccCCCchHHH--HHHHHHHHHhccCCcEEEEEE
Q 028385 81 GTLDSLMCGTNAPISA--SQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~--~~~l~~i~r~LkpgG~~~~~~ 117 (210)
...+.. +.... .+++++++++|||||++++..
T Consensus 159 ~~~~~~-----~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 159 SSDPIG-----PAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CCCTTT-----GGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCC-----cchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 443221 11222 689999999999999997764
No 207
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.47 E-value=9.2e-14 Score=110.42 Aligned_cols=112 Identities=13% Similarity=0.129 Sum_probs=84.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcC--CCCcEEEEcccCCCCCC----CCCcccEEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFF----EDESFDAVI 78 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~--~~~v~~~~~d~~~~~~~----~~~~fD~Vi 78 (210)
...+|||+|||+|..+..+++. +..+|+++|+++.+++.++++.+. ..+++++++|+.+++ . ..++||+|+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~-~~~~~~~~~fD~Vl 161 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYK-DYLLKNEIFFDKIL 161 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHH-HHHHHTTCCEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcc-hhhhhccccCCEEE
Confidence 3458999999999999999874 435899999999999999998743 358999999998765 3 267899999
Q ss_pred ECCccchhccCC-----------CchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 79 DKGTLDSLMCGT-----------NAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 79 ~~~~l~~~~~~~-----------~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+.........-. .......++++++.++|||||.+++.+++
T Consensus 162 ~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 162 LDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp EEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 863322110000 00024578999999999999999988765
No 208
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.47 E-value=9.1e-15 Score=114.22 Aligned_cols=102 Identities=11% Similarity=0.047 Sum_probs=82.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCCCCC-----CCcccE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFE-----DESFDA 76 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~~~~-----~~~fD~ 76 (210)
+..+|||+|||+|..+..+++. ...+|+++|+++.+++.|+++.+. . ++++++++|+.+..... +++||+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 3468999999999999999985 245899999999999999988743 2 58999999997642011 478999
Q ss_pred EEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 77 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 77 Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
|++.... .+...+++++.++|||||++++.+.
T Consensus 140 V~~d~~~----------~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 140 IFIDADK----------TNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEEESCG----------GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEcCCh----------HHhHHHHHHHHHhcCCCeEEEEECC
Confidence 9976542 5667899999999999999988553
No 209
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.46 E-value=3.9e-13 Score=104.45 Aligned_cols=118 Identities=10% Similarity=-0.003 Sum_probs=90.7
Q ss_pred CCCEEEeCCCCchhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
..+|||||||+|.++..+++.+ ..+|+++|+++.+++.|+++.+.. .++++.++|+.+.. .++++||+|+..++-
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~-~~~~~~D~IviagmG 100 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVI-EKKDAIDTIVIAGMG 100 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC-CGGGCCCEEEEEEEC
T ss_pred CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhcc-CccccccEEEEeCCc
Confidence 3589999999999999999985 447999999999999999997432 46999999998764 334469998864332
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCchhhHhhhcccccceEE
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKARMIHLKWKVYNWKI 137 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~~~~~~~~~~~~~~~~ 137 (210)
......++.+..+.|+++|+|++...........++. ..+|.+
T Consensus 101 ---------g~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~--~~Gf~i 143 (244)
T 3gnl_A 101 ---------GTLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSE--QNNWLI 143 (244)
T ss_dssp ---------HHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHH--HHTEEE
T ss_pred ---------hHHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHH--HCCCEE
Confidence 2457888999999999999998877655555544542 335555
No 210
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.46 E-value=6.8e-14 Score=111.60 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=80.6
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc------------CCCCcEEEEcccCCC-CCCCCCcc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE------------EIPQLKYLQMDVRDM-SFFEDESF 74 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~------------~~~~v~~~~~d~~~~-~~~~~~~f 74 (210)
..+|||||||+|.++..+++.+..+++++|+++.+++.|+++.. ..++++++.+|+.+. + . +++|
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~-~-~~~f 153 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIK-N-NRGF 153 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHH-H-CCCE
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhc-c-cCCe
Confidence 46899999999999999998866689999999999999998871 236799999998763 3 2 6789
Q ss_pred cEEEECCccchhccCCCchHH--HHHHHHHHHHhccCCcEEEEEE
Q 028385 75 DAVIDKGTLDSLMCGTNAPIS--ASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 75 D~Vi~~~~l~~~~~~~~~~~~--~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
|+|++....+ . + +... ..++++++.++|||||++++..
T Consensus 154 D~Ii~d~~~~-~--~--~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 154 DVIIADSTDP-V--G--PAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEECCCC-C---------TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCC-C--C--cchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9999865432 1 0 1112 3678999999999999997754
No 211
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.46 E-value=6e-13 Score=105.70 Aligned_cols=99 Identities=11% Similarity=0.147 Sum_probs=81.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
...+|||+|||+|.++..+++. + ..+++++|+++.+++.|+++.+.. +++++..+|+.+. +++++||+|++.
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~V~~~- 188 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG--FDEKDVDALFLD- 188 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC--CSCCSEEEEEEC-
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc--ccCCccCEEEEC-
Confidence 3458999999999999999887 3 458999999999999999987432 5789999999875 456789999973
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
. ++...+++++.++|||||.+++.+..
T Consensus 189 ----~-------~~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 189 ----V-------PDPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp ----C-------SCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred ----C-------cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 2 34457899999999999999887753
No 212
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.46 E-value=6.1e-14 Score=109.96 Aligned_cols=110 Identities=9% Similarity=0.135 Sum_probs=74.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCC---CCCC---CCcccE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDM---SFFE---DESFDA 76 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~---~~~~---~~~fD~ 76 (210)
...+|||+|||+|.++..+++. +..+|+++|+|+.|++.|+++... . .+++++++|+.+. + ++ +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDA-LKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTT-STTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhh-hhcccCCcccE
Confidence 3458999999999999888875 335899999999999999998743 2 3599999998762 3 44 368999
Q ss_pred EEECCccchhcc--CCCc------hHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 77 VIDKGTLDSLMC--GTNA------PISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 77 Vi~~~~l~~~~~--~~~~------~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
|+++..+++... .... ......++.+++++|||||.+.++.
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~ 192 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVK 192 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEH
Confidence 999977765410 0000 0122356778889999999876553
No 213
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.46 E-value=8.7e-14 Score=115.69 Aligned_cols=114 Identities=11% Similarity=0.126 Sum_probs=86.7
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CC--CcEEEEcccCCC-CCC--CCCcccEEEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IP--QLKYLQMDVRDM-SFF--EDESFDAVID 79 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~--~v~~~~~d~~~~-~~~--~~~~fD~Vi~ 79 (210)
...+|||+|||+|.++..+++.+..+|+++|+|+.+++.|+++.+. .. +++|+++|+.+. +.+ ..++||+|++
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 3458999999999999999987766899999999999999998742 33 899999998773 211 2458999998
Q ss_pred CCccchh--ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 80 KGTLDSL--MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 80 ~~~l~~~--~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
....... ...........+++.++.++|+|||.+++.+...
T Consensus 292 DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 292 DPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp CCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 6544211 0111233677788999999999999998877553
No 214
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.45 E-value=7.3e-14 Score=109.40 Aligned_cols=101 Identities=10% Similarity=0.049 Sum_probs=81.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCC-CCC-----CCCccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDM-SFF-----EDESFD 75 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~-~~~-----~~~~fD 75 (210)
+..+|||||||+|..+..+++. + ..+++++|+++.+++.|+++.+.. ++++++.+|+.+. +.+ .+++||
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 3468999999999999999886 2 458999999999999999987432 4799999998763 212 157899
Q ss_pred EEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 76 AVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 76 ~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+|++.... .+...+++++.++|||||++++..
T Consensus 159 ~V~~d~~~----------~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 159 FIFVDADK----------DNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEEECSCS----------TTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEcCch----------HHHHHHHHHHHHhCCCCeEEEEec
Confidence 99986432 456789999999999999997754
No 215
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.45 E-value=6.9e-13 Score=102.06 Aligned_cols=117 Identities=11% Similarity=0.046 Sum_probs=88.7
Q ss_pred CCEEEeCCCCchhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCC-cccEEEECCcc
Q 028385 9 RDTCRRAAPSIVMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDE-SFDAVIDKGTL 83 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~-~fD~Vi~~~~l 83 (210)
.+|||||||+|.++..+++.+ ..+|+++|+++.+++.|+++.+.. .++++..+|+.+. ++.+ .||+|+..++-
T Consensus 17 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~--l~~~~~~D~IviaG~G 94 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA--FEETDQVSVITIAGMG 94 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG--CCGGGCCCEEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh--cccCcCCCEEEEcCCC
Confidence 589999999999999999975 457999999999999999988533 4699999998642 2333 69988864431
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCchhhHhhhcccccceEEE
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKARMIHLKWKVYNWKIE 138 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~~~~~~~~~~~~~~~~~ 138 (210)
......++.+..+.|+++|++++...........++. ..+|.+.
T Consensus 95 ---------g~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L~--~~Gf~i~ 138 (225)
T 3kr9_A 95 ---------GRLIARILEEGLGKLANVERLILQPNNREDDLRIWLQ--DHGFQIV 138 (225)
T ss_dssp ---------HHHHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHHH--HTTEEEE
T ss_pred ---------hHHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHHH--HCCCEEE
Confidence 1447889999999999999998876655554444442 3355553
No 216
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.44 E-value=2.7e-13 Score=105.44 Aligned_cols=101 Identities=14% Similarity=0.093 Sum_probs=81.0
Q ss_pred CCCEEEeCCCCchhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCC-C-------------C
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDM-S-------------F 68 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~-~-------------~ 68 (210)
..+|||+|||+|..+..+++. + ..+|+++|+++.+++.|+++... . .++.+.++|+.+. + .
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 468999999999999999987 2 45899999999999999998743 2 3489999998652 1 1
Q ss_pred CCC--CcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 69 FED--ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 69 ~~~--~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
|++ ++||+|++.... .+...+++++.++|||||++++.+.
T Consensus 141 f~~~~~~fD~I~~~~~~----------~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDADK----------ENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp TCCSTTCEEEEEECSCG----------GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred ccCCCCCcCEEEEeCCH----------HHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 233 789999987543 4556889999999999999988653
No 217
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.44 E-value=3.7e-14 Score=112.75 Aligned_cols=103 Identities=15% Similarity=0.026 Sum_probs=73.9
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc---CC-CCcEEE--EcccCCCCCCCCCcccEEEECC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE---EI-PQLKYL--QMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---~~-~~v~~~--~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
..+|||+|||+|.++..+++. .+|+|+|+++ |+..++++.. .. .++.++ ++|+.+++ +++||+|++..
T Consensus 83 g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~---~~~fD~Vvsd~ 156 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME---PFQADTVLCDI 156 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC---CCCCSEEEECC
T ss_pred CCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC---CCCcCEEEECC
Confidence 458999999999999999988 4899999999 5433322211 01 178999 99998764 67999999976
Q ss_pred ccchhccCCCchHHH--HHHHHHHHHhccCCc--EEEEEEcC
Q 028385 82 TLDSLMCGTNAPISA--SQMLGEVSRLLKPGG--IYMLITYG 119 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~--~~~l~~i~r~LkpgG--~~~~~~~~ 119 (210)
. ++. +....... ..+++++.++||||| .|++..+.
T Consensus 157 ~-~~~--~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 157 G-ESN--PTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp C-CCC--SCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred C-cCC--CchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 6 321 00000111 147999999999999 99887766
No 218
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.44 E-value=1.1e-13 Score=115.48 Aligned_cols=114 Identities=15% Similarity=0.069 Sum_probs=87.1
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--C-CcEEEEcccCCCC-CC--CCCcccEEEEC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--P-QLKYLQMDVRDMS-FF--EDESFDAVIDK 80 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~-~v~~~~~d~~~~~-~~--~~~~fD~Vi~~ 80 (210)
...+|||+|||+|.++..+++.+..+|+++|+|+.+++.|+++.+.. . +++++++|+.+.. .+ .+++||+|++.
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 44689999999999999999987668999999999999999987432 3 7999999987753 01 25789999986
Q ss_pred CccchhccC--CCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 81 GTLDSLMCG--TNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 81 ~~l~~~~~~--~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
......... .........++.++.++|||||.+++.+++.
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 543211000 0011567889999999999999998887753
No 219
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.44 E-value=6.8e-13 Score=109.88 Aligned_cols=109 Identities=15% Similarity=0.106 Sum_probs=83.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCC-CcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGY-EDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
...+|||+|||+|.++..++..+. .+++|+|+|+.|++.|+++.... +++++.++|+.+++ +++++||+|+++..
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~-~~~~~fD~Ii~npP 295 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS-QYVDSVDFAISNLP 295 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG-GTCSCEEEEEEECC
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-cccCCcCEEEECCC
Confidence 456899999999999999998754 48999999999999999987432 47999999999998 77889999999876
Q ss_pred cchhccCCCchH-HHHHHHHHHHHhccCCcEEEEEEc
Q 028385 83 LDSLMCGTNAPI-SASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 83 l~~~~~~~~~~~-~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
+..-........ ...++++++.++| ||.+++++.
T Consensus 296 yg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~ 330 (373)
T 3tm4_A 296 YGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT 330 (373)
T ss_dssp CC------CCHHHHHHHHHHHHHHHE--EEEEEEEES
T ss_pred CCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC
Confidence 543211111122 3478899999999 555555553
No 220
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.43 E-value=7.4e-14 Score=108.40 Aligned_cols=96 Identities=13% Similarity=0.141 Sum_probs=66.9
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-----CCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-----PQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
...+|||||||+|.++..+++.+..+|+|+|+|+.|++.++++.... .++.+.. ..+ ++...||.+.+..
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~d~~~~D~ 111 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAV--LAD---FEQGRPSFTSIDV 111 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCC--GGG---CCSCCCSEEEECC
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeC--HhH---cCcCCCCEEEEEE
Confidence 34589999999999999999987669999999999999988765321 1222222 111 1122245544443
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
++.++ ..++.+++|+|||||.+++..
T Consensus 112 v~~~l----------~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 112 SFISL----------DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp SSSCG----------GGTHHHHHHHSCTTCEEEEEE
T ss_pred EhhhH----------HHHHHHHHHhccCCCEEEEEE
Confidence 33332 678999999999999998863
No 221
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.43 E-value=5.1e-14 Score=111.36 Aligned_cols=103 Identities=8% Similarity=-0.063 Sum_probs=73.4
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC---C-CCcEEE--EcccCCCCCCCCCcccEEEECC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE---I-PQLKYL--QMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---~-~~v~~~--~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
..+|||+|||+|.++..+++. .+|+|+|+++ |+..++++... . .++.++ ++|+.+++ +++||+|++..
T Consensus 75 g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~---~~~fD~V~sd~ 148 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP---VERTDVIMCDV 148 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC---CCCCSEEEECC
T ss_pred CCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC---CCCCcEEEEeC
Confidence 458999999999999999987 5899999998 53322211100 0 178999 89998764 67999999976
Q ss_pred ccchhccCCCchHHH--HHHHHHHHHhccCCc--EEEEEEcC
Q 028385 82 TLDSLMCGTNAPISA--SQMLGEVSRLLKPGG--IYMLITYG 119 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~--~~~l~~i~r~LkpgG--~~~~~~~~ 119 (210)
. ++. +....... ..++.++.++||||| .|++..+.
T Consensus 149 ~-~~~--~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 149 G-ESS--PKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp C-CCC--SCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred c-ccC--CccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 6 321 00000111 138999999999999 99887766
No 222
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.43 E-value=3.7e-14 Score=105.15 Aligned_cols=86 Identities=16% Similarity=0.265 Sum_probs=73.1
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCC---CCCcccEEEECCccc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF---EDESFDAVIDKGTLD 84 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~---~~~~fD~Vi~~~~l~ 84 (210)
..+|||+|||. +++|+|+.|++.|+++... ++++.++|+.+++ + ++++||+|++..++|
T Consensus 13 g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~--~~~~~~~d~~~~~-~~~~~~~~fD~V~~~~~l~ 74 (176)
T 2ld4_A 13 GQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN--EGRVSVENIKQLL-QSAHKESSFDIILSGLVPG 74 (176)
T ss_dssp TSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT--TSEEEEEEGGGGG-GGCCCSSCEEEEEECCSTT
T ss_pred CCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc--CcEEEEechhcCc-cccCCCCCEeEEEECChhh
Confidence 35799999986 2399999999999998753 5899999999987 6 789999999999999
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
|+. .+..+++++++|+|||||++++..
T Consensus 75 ~~~------~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 75 STT------LHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp CCC------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcc------cCHHHHHHHHHHHCCCCEEEEEEc
Confidence 861 245889999999999999998854
No 223
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.42 E-value=5.4e-13 Score=118.54 Aligned_cols=111 Identities=14% Similarity=0.160 Sum_probs=86.5
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CC--CCcEEEEcccCC-CCCCCCCcccEEEECCc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EI--PQLKYLQMDVRD-MSFFEDESFDAVIDKGT 82 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~--~~v~~~~~d~~~-~~~~~~~~fD~Vi~~~~ 82 (210)
..+|||+|||+|.++..++..+..+|+++|+|+.+++.|+++.+ .. .+++++++|+.+ ++ ...++||+|++...
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~-~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR-EANEQFDLIFIDPP 618 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHH-HCCCCEEEEEECCC
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHH-hcCCCccEEEECCc
Confidence 45899999999999999998877679999999999999999874 22 379999999987 33 34678999998654
Q ss_pred cchhcc----CCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 83 LDSLMC----GTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 83 l~~~~~----~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
...-.- ......+..+++.++.++|||||.+++.+..
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 211000 0012278889999999999999999876543
No 224
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.42 E-value=2.9e-13 Score=101.71 Aligned_cols=102 Identities=15% Similarity=0.231 Sum_probs=75.2
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CC---------CcEEEEeCCHHHHHHHHHhhcCCCCcEEE-EcccCCCC-------CC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GY---------EDIVNIDISSVAIDMMKMKYEEIPQLKYL-QMDVRDMS-------FF 69 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~---------~~v~~vD~s~~~~~~a~~~~~~~~~v~~~-~~d~~~~~-------~~ 69 (210)
..+|||+|||+|.++..+++. +. .+|+++|+|+.+ ..+++++. .+|+.+.+ .+
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~~~~~~~~~~~d~~~~~~~~~~~~~~ 93 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------PLEGATFLCPADVTDPRTSQRILEVL 93 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------CCTTCEEECSCCTTSHHHHHHHHHHS
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------cCCCCeEEEeccCCCHHHHHHHHHhc
Confidence 468999999999999999987 43 589999999831 12578889 88887643 03
Q ss_pred CCCcccEEEECCccchhccCCCchHHH-------HHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 70 EDESFDAVIDKGTLDSLMCGTNAPISA-------SQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 70 ~~~~fD~Vi~~~~l~~~~~~~~~~~~~-------~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
++++||+|++...+++... ...+. ..+++++.++|||||.+++..+..+
T Consensus 94 ~~~~fD~V~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 149 (196)
T 2nyu_A 94 PGRRADVILSDMAPNATGF---RDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS 149 (196)
T ss_dssp GGGCEEEEEECCCCCCCSC---HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG
T ss_pred CCCCCcEEEeCCCCCCCCC---cccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Confidence 4568999999765443100 00222 5889999999999999998877654
No 225
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.42 E-value=3e-13 Score=104.86 Aligned_cols=102 Identities=11% Similarity=0.045 Sum_probs=80.9
Q ss_pred CCCEEEeCCCCchhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhc--CC-CCcEEEEcccCCC-CC--CCC--CcccEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYE--EI-PQLKYLQMDVRDM-SF--FED--ESFDAV 77 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~--~~-~~v~~~~~d~~~~-~~--~~~--~~fD~V 77 (210)
..+|||+|||+|..+..+++. + ..+++++|+++.+++.|+++.. .. +++++.++|+.+. +. ..+ ++||+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 458999999999999999986 2 3589999999999999998863 22 4689999997552 10 223 789999
Q ss_pred EECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 78 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 78 i~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
++.... .+...+++++.++|||||.+++.+..
T Consensus 153 ~~d~~~----------~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 153 FIDADK----------RNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp EECSCG----------GGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred EECCCH----------HHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 976542 56788999999999999999886543
No 226
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.41 E-value=1.8e-12 Score=103.61 Aligned_cols=99 Identities=14% Similarity=0.159 Sum_probs=77.1
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
....+|||+|||+|.++..+++.+. +|+++|+|+.|++.++++.... ++++++++|+.+.+ ++ +||+|+++..
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~-~~--~fD~vv~nlp 102 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD-LP--FFDTCVANLP 102 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC-CC--CCSEEEEECC
T ss_pred CCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceeccc-ch--hhcEEEEecC
Confidence 3446899999999999999999865 8999999999999999987543 57999999999877 54 7999999877
Q ss_pred cchhccCCCchHHHHHHH--------------HHH--HHhccCCcEEE
Q 028385 83 LDSLMCGTNAPISASQML--------------GEV--SRLLKPGGIYM 114 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l--------------~~i--~r~LkpgG~~~ 114 (210)
++.. .+....++ +++ ++++||||.++
T Consensus 103 y~~~------~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 103 YQIS------SPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp GGGH------HHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cccc------hHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 6653 11222333 223 36899999873
No 227
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.41 E-value=4.2e-13 Score=111.94 Aligned_cols=113 Identities=16% Similarity=0.186 Sum_probs=86.7
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CC-C-CcEEEEcccCCCC-CC--CCCcccEEEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EI-P-QLKYLQMDVRDMS-FF--EDESFDAVID 79 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~-~-~v~~~~~d~~~~~-~~--~~~~fD~Vi~ 79 (210)
...+|||+|||+|.++..+++.+..+|+++|+|+.+++.|+++.+ .. . +++++++|+.+.. .+ .+++||+|++
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 345899999999999999999876689999999999999999874 33 3 7899999998752 01 1468999998
Q ss_pred CCccchhcc--CCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 80 KGTLDSLMC--GTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 80 ~~~l~~~~~--~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
........- -.........++.++.++|+|||.+++.+..
T Consensus 300 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 754311100 0011257789999999999999999887765
No 228
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.41 E-value=1.6e-13 Score=110.60 Aligned_cols=99 Identities=9% Similarity=-0.028 Sum_probs=72.4
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeC----CHHHHHHHHHhhcCC--CCcEEEEc-ccCCCCCCCCCcccEEEEC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDI----SSVAIDMMKMKYEEI--PQLKYLQM-DVRDMSFFEDESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~----s~~~~~~a~~~~~~~--~~v~~~~~-d~~~~~~~~~~~fD~Vi~~ 80 (210)
..+|||+|||+|.++..+++. .+|+++|+ ++.+++.+ ..+.. +++.++++ |+..++ .++||+|++.
T Consensus 83 g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~---~~~fD~V~sd 155 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIP---PERCDTLLCD 155 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSC---CCCCSEEEEC
T ss_pred CCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCC---cCCCCEEEEC
Confidence 458999999999999999987 47999999 55443211 11111 57899998 887654 5689999997
Q ss_pred Cccc---hhccCCCchHHH---HHHHHHHHHhccCCcEEEEEEcCC
Q 028385 81 GTLD---SLMCGTNAPISA---SQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 81 ~~l~---~~~~~~~~~~~~---~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
..++ +. .+. ..++.++.++|||||.|++..+..
T Consensus 156 ~~~~~g~~~-------~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 156 IGESSPNPT-------VEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCCSSHH-------HHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CccccCcch-------hhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 6653 22 222 258899999999999998766544
No 229
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.41 E-value=4.6e-13 Score=111.43 Aligned_cols=110 Identities=10% Similarity=-0.006 Sum_probs=82.0
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
..+|||+|||+|.++..+++.+.. |+++|+|+.+++.|+++.+.. ....+.++|+.+......+.||+|++......-
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~ 293 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVK 293 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCS
T ss_pred CCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCC
Confidence 468999999999999999998774 999999999999999987422 123577899877420113349999987543110
Q ss_pred ccCC----CchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 87 MCGT----NAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 87 ~~~~----~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+. .......+++..+.++|||||.+++.+++.
T Consensus 294 --~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 294 --RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp --SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred --CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 00 012466789999999999999998887764
No 230
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.41 E-value=7.6e-13 Score=105.67 Aligned_cols=106 Identities=14% Similarity=0.166 Sum_probs=79.0
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--C-CcEEEEcccCCCCCCCCCcc---cEEEECC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--P-QLKYLQMDVRDMSFFEDESF---DAVIDKG 81 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~-~v~~~~~d~~~~~~~~~~~f---D~Vi~~~ 81 (210)
..+|||+|||+|.++..+++.+..+|+++|+|+.+++.|+++.... . +++|+++|+.+. ++ ++| |+|+++.
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~--~~-~~f~~~D~IvsnP 200 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP--FK-EKFASIEMILSNP 200 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG--GG-GGTTTCCEEEECC
T ss_pred CCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh--cc-cccCCCCEEEEcC
Confidence 3589999999999999998874458999999999999999987432 3 599999999873 22 478 9999985
Q ss_pred ccchhcc----C--CCch------HHHHHHHHHHH-HhccCCcEEEEE
Q 028385 82 TLDSLMC----G--TNAP------ISASQMLGEVS-RLLKPGGIYMLI 116 (210)
Q Consensus 82 ~l~~~~~----~--~~~~------~~~~~~l~~i~-r~LkpgG~~~~~ 116 (210)
.+..... . ..+. .+...+++++. +.|+|||++++.
T Consensus 201 Pyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 201 PYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp CCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred CCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 4332100 0 0000 11227899999 999999999764
No 231
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.41 E-value=1.9e-13 Score=105.29 Aligned_cols=102 Identities=10% Similarity=0.139 Sum_probs=81.2
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCCC-CCCCC----CcccE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRDM-SFFED----ESFDA 76 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~-~~~~~----~~fD~ 76 (210)
...+|||+|||+|..+..+++. + ..+++++|+++.+++.|+++.+.. .+++++++|+.+. +.+.. ++||+
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 3468999999999999999986 2 458999999999999999887432 5799999998653 11211 68999
Q ss_pred EEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 77 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 77 Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
|++.... .....+++++.++|||||.+++.+.
T Consensus 149 v~~d~~~----------~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 149 AVVDADK----------ENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEECSCS----------TTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEECCCH----------HHHHHHHHHHHHHcCCCeEEEEECC
Confidence 9986542 4567889999999999999988653
No 232
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.41 E-value=1.9e-13 Score=107.91 Aligned_cols=93 Identities=9% Similarity=0.135 Sum_probs=77.0
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC------CCCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE------IPQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
..+|||||||+|.++..+++.+ .+++++|+++.+++.|+++... .++++++.+|+... . ++||+|++..
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~---~-~~fD~Ii~d~ 147 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD---I-KKYDLIFCLQ 147 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC---C-CCEEEEEESS
T ss_pred CCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH---H-hhCCEEEECC
Confidence 3689999999999999998886 7999999999999999987643 26799999998764 2 7899999852
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
. +...+++++.++|||||++++..
T Consensus 148 ~------------dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 148 E------------PDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp C------------CCHHHHHHHHTTEEEEEEEEEEE
T ss_pred C------------ChHHHHHHHHHhcCCCcEEEEEc
Confidence 1 12248999999999999997754
No 233
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.40 E-value=2.9e-13 Score=112.46 Aligned_cols=112 Identities=16% Similarity=0.141 Sum_probs=85.2
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCC-CC--CCCcccEEEECCc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMS-FF--EDESFDAVIDKGT 82 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~-~~--~~~~fD~Vi~~~~ 82 (210)
..+|||+|||+|.++..+++. ..+|+++|+|+.+++.|+++.+ ...+++++++|+.+.. .+ .+++||+|++...
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP 288 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPP 288 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCC
Confidence 457999999999999999987 5589999999999999999874 3356999999998753 01 2578999998643
Q ss_pred cchhccC--CCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 83 LDSLMCG--TNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 83 l~~~~~~--~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
.....-. .........++.++.++|+|||.+++.++..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 289 AFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 2111000 0011567889999999999999998887653
No 234
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.40 E-value=4.4e-13 Score=104.26 Aligned_cols=101 Identities=13% Similarity=0.081 Sum_probs=81.4
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCC-CCC-----CCCccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDM-SFF-----EDESFD 75 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~-~~~-----~~~~fD 75 (210)
+..+|||||||+|..+..+++. + ..+++++|+++.+++.|+++.+. . ++++++++|+.+. +.+ ..++||
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 3468999999999999999886 3 45899999999999999988743 2 4699999998763 212 257899
Q ss_pred EEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 76 AVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 76 ~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+|++... ..+...+++++.++|||||++++..
T Consensus 150 ~I~~d~~----------~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 150 FGFVDAD----------KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEECSC----------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCc----------hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 9997543 2567889999999999999997754
No 235
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.37 E-value=8.3e-13 Score=104.81 Aligned_cols=98 Identities=12% Similarity=0.149 Sum_probs=80.5
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CC-CCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EI-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
..+|||+|||+|.++..+++.+..+|+++|+|+.+++.++++.+ +. ++++++++|+.+++ ..+.||.|+......
T Consensus 126 g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~--~~~~~D~Vi~~~p~~ 203 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP--GENIADRILMGYVVR 203 (278)
T ss_dssp TCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC--CCSCEEEEEECCCSS
T ss_pred CCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc--cccCCCEEEECCCCc
Confidence 45799999999999999999887799999999999999999874 33 56899999999875 567899999765432
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
...++..+.++||+||++.+.++
T Consensus 204 -----------~~~~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 204 -----------THEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp -----------GGGGHHHHHHHEEEEEEEEEEEE
T ss_pred -----------HHHHHHHHHHHcCCCCEEEEEee
Confidence 23457778899999999876554
No 236
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.36 E-value=2.7e-12 Score=108.77 Aligned_cols=113 Identities=21% Similarity=0.214 Sum_probs=84.2
Q ss_pred CCCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCC-CCCCcccEEEECC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSF-FEDESFDAVIDKG 81 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~-~~~~~fD~Vi~~~ 81 (210)
...+|||+|||+|..+..+++. +..+++++|+++.+++.++++.+ +..++.+.++|+.+.+. +++++||+|++..
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~ 338 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDA 338 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEEC
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcC
Confidence 3458999999999999999885 32589999999999999999874 33689999999988652 4457899999743
Q ss_pred ccchhcc-CCCch--------------HHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 82 TLDSLMC-GTNAP--------------ISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 82 ~l~~~~~-~~~~~--------------~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
....... ...+. ....++++++.++|||||.+++.+++
T Consensus 339 Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 339 PCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp CCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 2211100 00000 01267899999999999999988876
No 237
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.35 E-value=2.7e-12 Score=98.97 Aligned_cols=101 Identities=15% Similarity=-0.024 Sum_probs=81.4
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
...+|||||||+|.++..+. +...|+++|+++.+++.+++.... ..+..+..+|....+ +.++||+|++.-++|+
T Consensus 105 ~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~--~~~~~DvvLllk~lh~ 180 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAP--PAEAGDLALIFKLLPL 180 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSC--CCCBCSEEEEESCHHH
T ss_pred CCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCC--CCCCcchHHHHHHHHH
Confidence 45689999999999998887 556899999999999999998743 367889999998876 4459999999999998
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+ ..... ...-++...|+++|.++...
T Consensus 181 L-----E~q~~-~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 181 L-----EREQA-GSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp H-----HHHST-THHHHHHHHCBCSEEEEEEE
T ss_pred h-----hhhch-hhHHHHHHHhcCCCEEEEcC
Confidence 8 22222 33448888999999886654
No 238
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.33 E-value=1.6e-12 Score=101.20 Aligned_cols=101 Identities=13% Similarity=0.048 Sum_probs=83.9
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
..+|||||||+|.++..+... +..+|+++|+++.|++.++++.... .+..+...|...-+ +.+.||+|++.-++++
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~--p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR--LDEPADVTLLLKTLPC 210 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC--CCSCCSEEEETTCHHH
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC--CCCCcchHHHHHHHHH
Confidence 568999999999999988876 6668999999999999999998432 45788888887654 6788999999999999
Q ss_pred hccCCCchHHH--HHHHHHHHHhccCCcEEEEEEc
Q 028385 86 LMCGTNAPISA--SQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 86 ~~~~~~~~~~~--~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
+ ++. ...+ ++...|+++|.++....
T Consensus 211 L-------e~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 211 L-------ETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp H-------HHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred h-------hhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 9 443 2444 89999999999976554
No 239
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.33 E-value=4e-12 Score=108.29 Aligned_cols=113 Identities=15% Similarity=0.187 Sum_probs=84.4
Q ss_pred CCCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
...+|||+|||+|..+..+++. +...|+++|+|+.+++.++++.+ ...++.++++|+.+++...+++||.|++...
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 4468999999999999999886 33589999999999999999874 3468999999998865114678999998432
Q ss_pred c------chhccCC--Cch-------HHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 83 L------DSLMCGT--NAP-------ISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 83 l------~~~~~~~--~~~-------~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
. ....... ... ....++++++.++|||||+++..+++
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 1 1100000 001 12457899999999999999988775
No 240
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.32 E-value=4e-12 Score=103.84 Aligned_cols=97 Identities=21% Similarity=0.200 Sum_probs=79.7
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
...+|||+|||+|.++.. ++ +..+|+++|+|+.+++.++++.+. . ++++++++|+.+.. ++||+|++....
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----VKGNRVIMNLPK 268 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----CCEEEEEECCTT
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----CCCcEEEECCcH
Confidence 446899999999999999 77 566899999999999999998743 2 47999999998753 789999986432
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
. ...++.++.++|+|||.+++.++..
T Consensus 269 ~-----------~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 269 F-----------AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp T-----------GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred h-----------HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 1 2367889999999999998887664
No 241
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.31 E-value=3.3e-11 Score=98.63 Aligned_cols=109 Identities=12% Similarity=0.125 Sum_probs=81.9
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCC------CcEEEEeCCHHHHHHHHHhhcC-CCCcEEEEcccCCCCCCCCCcccEEEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGY------EDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFFEDESFDAVID 79 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~------~~v~~vD~s~~~~~~a~~~~~~-~~~v~~~~~d~~~~~~~~~~~fD~Vi~ 79 (210)
...+|||+|||+|.++..+++... .+++|+|+++.+++.|+.+... ..++.+.++|.... ...++||+|++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~--~~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN--LLVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC--CCCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc--cccCCccEEEE
Confidence 446899999999999998887521 4799999999999999987631 12688999998763 35678999999
Q ss_pred CCccchhccC----------CCchH-HHHHHHHHHHHhccCCcEEEEEE
Q 028385 80 KGTLDSLMCG----------TNAPI-SASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 80 ~~~l~~~~~~----------~~~~~-~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+..+.++... ..+.. ....++.++.+.|||||+++++.
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 9887654100 00001 12368999999999999998876
No 242
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.31 E-value=1.1e-11 Score=99.53 Aligned_cols=75 Identities=15% Similarity=0.133 Sum_probs=60.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
...+|||+|||+|.++..+++.+. +|+++|+++.+++.++++.. ..++++++++|+.+.+ + .+||+|+++..++
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~-~--~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV-F--PKFDVCTANIPYK 117 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC-C--CCCSEEEEECCGG
T ss_pred CcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC-c--ccCCEEEEcCCcc
Confidence 446899999999999999998754 89999999999999998873 3368999999998876 4 3899999987765
Q ss_pred h
Q 028385 85 S 85 (210)
Q Consensus 85 ~ 85 (210)
.
T Consensus 118 ~ 118 (299)
T 2h1r_A 118 I 118 (299)
T ss_dssp G
T ss_pred c
Confidence 4
No 243
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.30 E-value=2.8e-11 Score=94.50 Aligned_cols=75 Identities=11% Similarity=0.171 Sum_probs=62.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCC-CcccEEEECCccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFED-ESFDAVIDKGTLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~-~~fD~Vi~~~~l~ 84 (210)
...+|||+|||+|.++..+++.+ .+|+++|+|+.+++.++++....++++++++|+.+++ +++ ..| .|+++..++
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~-~~~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFK-FPKNQSY-KIFGNIPYN 105 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCC-CCSSCCC-EEEEECCGG
T ss_pred CCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCC-cccCCCe-EEEEeCCcc
Confidence 44689999999999999999987 4899999999999999998866578999999999987 664 456 566655543
No 244
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.30 E-value=2.8e-12 Score=108.33 Aligned_cols=113 Identities=12% Similarity=0.078 Sum_probs=84.1
Q ss_pred CCCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
...+|||+|||+|..+..+++. +..+|+++|+++.+++.++++.+ ...++.+.++|+.+++...+++||+|++...
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaP 184 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAP 184 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECC
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCC
Confidence 4468999999999999999875 34589999999999999999874 3367999999988764123578999998543
Q ss_pred cchhcc-CCCch--------------HHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 83 LDSLMC-GTNAP--------------ISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 83 l~~~~~-~~~~~--------------~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
...... ...+. ....+++.++.++|||||.++..+++
T Consensus 185 CSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 185 CSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp CCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred CCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEee
Confidence 211100 00000 12348899999999999999887775
No 245
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.28 E-value=4.7e-12 Score=107.13 Aligned_cols=112 Identities=18% Similarity=0.174 Sum_probs=83.2
Q ss_pred CCCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
...+|||+|||+|..+..+++. +...|+++|+|+.+++.++++.+ ... +.++++|+.+++.+.+++||+|++...
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~D~P 179 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLLDAP 179 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEEECC
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEECCC
Confidence 4468999999999999999875 33589999999999999999874 335 899999988764224678999997433
Q ss_pred cchhc-cCCCc-------h-------HHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 83 LDSLM-CGTNA-------P-------ISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 83 l~~~~-~~~~~-------~-------~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
..... ....+ . ....++++++.++|||||+++..+++
T Consensus 180 cSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 180 CSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp CCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred cCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 21100 00000 0 12478999999999999999987775
No 246
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.28 E-value=5.9e-12 Score=100.79 Aligned_cols=77 Identities=10% Similarity=0.101 Sum_probs=67.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
...+|||||||+|.++..+++.+. +|+++|+++.+++.++++....++++++++|+.+++ +++.+||+|+++..++.
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~~~-~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~-~~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKNAK-KVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVD-LNKLDFNKVVANLPYQI 126 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSC-GGGSCCSEEEEECCGGG
T ss_pred CcCEEEEECCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCC-cccCCccEEEEeCcccc
Confidence 446899999999999999999854 899999999999999998865578999999999988 77788999999877653
No 247
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.26 E-value=1.4e-11 Score=103.72 Aligned_cols=113 Identities=15% Similarity=0.137 Sum_probs=83.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCCC-CCCCcccEEEECCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSF-FEDESFDAVIDKGTL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~-~~~~~fD~Vi~~~~l 83 (210)
...+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++.+.. .++.+.++|+.+.+. +++++||+|++....
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pc 325 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPC 325 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCC
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCC
Confidence 34589999999999999999863 258999999999999999987432 357899999987641 345789999974332
Q ss_pred chhcc-CCCch--------------HHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 84 DSLMC-GTNAP--------------ISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 84 ~~~~~-~~~~~--------------~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
..... ...+. ....++++++.++|||||++++.+++
T Consensus 326 sg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp CCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred CcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 11100 00010 12358899999999999999998865
No 248
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.24 E-value=5.3e-13 Score=104.29 Aligned_cols=101 Identities=12% Similarity=0.182 Sum_probs=77.2
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCC-CcccEEEECCccch
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFED-ESFDAVIDKGTLDS 85 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~-~~fD~Vi~~~~l~~ 85 (210)
...+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.++++....++++++++|+.+++ +++ ++| .|+++..++.
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~-~~~~~~f-~vv~n~Py~~ 105 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQ-FPNKQRY-KIVGNIPYHL 105 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTT-CCCSSEE-EEEEECCSSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcC-cccCCCc-EEEEeCCccc
Confidence 44589999999999999999887 5899999999999999887764468999999999987 664 689 6777654332
Q ss_pred hccCCCchHHHHHH----------H----HHHHHhccCCcEEEEE
Q 028385 86 LMCGTNAPISASQM----------L----GEVSRLLKPGGIYMLI 116 (210)
Q Consensus 86 ~~~~~~~~~~~~~~----------l----~~i~r~LkpgG~~~~~ 116 (210)
. ......+ + +.+.|+|||||.+.+.
T Consensus 106 ~------~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 106 S------TQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp C------HHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred c------HHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 1 1112222 2 6689999999987654
No 249
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.23 E-value=7.2e-11 Score=99.54 Aligned_cols=97 Identities=7% Similarity=0.143 Sum_probs=75.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCC----CCCCCCcccEEEEC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDM----SFFEDESFDAVIDK 80 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~----~~~~~~~fD~Vi~~ 80 (210)
...+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|+++.+ ...+++|+++|+.+. + +.+++||+|+++
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~~~-~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~-~~~~~fD~Vv~d 363 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLATQA-ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQP-WAKNGFDKVLLD 363 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSG-GGTTCCSEEEEC
T ss_pred CCCEEEECCCCCCHHHHHHHhhC-CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhh-hhcCCCCEEEEC
Confidence 44689999999999999999884 489999999999999999874 336899999999882 3 456789999986
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
...... ..+++.+.+ ++|++.+++.
T Consensus 364 PPr~g~----------~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 364 PARAGA----------AGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp CCTTCC----------HHHHHHHHH-HCCSEEEEEE
T ss_pred CCCccH----------HHHHHHHHh-cCCCeEEEEE
Confidence 543322 245555544 6888877654
No 250
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.23 E-value=7.5e-11 Score=99.08 Aligned_cols=96 Identities=19% Similarity=0.261 Sum_probs=73.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
...+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|+++.+ +.. ++|+++|+.+.. +. +||+|++.....
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~-~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~--~~-~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGF-NVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVS--VK-GFDTVIVDPPRA 364 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCC--CT-TCSEEEECCCTT
T ss_pred CCCEEEEeeccchHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcC--cc-CCCEEEEcCCcc
Confidence 346899999999999999998754 89999999999999998874 334 899999998864 22 899999865432
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.. ...+++.+. .|+|||.+++..
T Consensus 365 g~---------~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 365 GL---------HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CS---------CHHHHHHHH-HHCCSEEEEEES
T ss_pred ch---------HHHHHHHHH-hcCCCcEEEEEC
Confidence 11 123445454 489999987653
No 251
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.23 E-value=2e-11 Score=99.66 Aligned_cols=113 Identities=18% Similarity=0.107 Sum_probs=80.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC----------CCcEEEEcccCCCC-CC--CCCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI----------PQLKYLQMDVRDMS-FF--EDES 73 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------~~v~~~~~d~~~~~-~~--~~~~ 73 (210)
...+||+||||+|..+..+++++..+|+++|+++.+++.|++..... ++++++.+|+...- .+ .+++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 45689999999999999999887678999999999999999987521 26999999998743 01 3578
Q ss_pred ccEEEECCccchhccCC---CchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 74 FDAVIDKGTLDSLMCGT---NAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 74 fD~Vi~~~~l~~~~~~~---~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
||+|+....-.....+. ...+-...+++.+.++|+|||++++...+
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 99999864320100000 11233344444459999999999776543
No 252
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.20 E-value=3.8e-11 Score=95.82 Aligned_cols=99 Identities=12% Similarity=-0.015 Sum_probs=69.8
Q ss_pred CCCCEEEeCCCC------chhHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhhcCCCCcEE-EEcccCCCCCCCCCcccEE
Q 028385 7 GTRDTCRRAAPS------IVMSEDMVKD-G-YEDIVNIDISSVAIDMMKMKYEEIPQLKY-LQMDVRDMSFFEDESFDAV 77 (210)
Q Consensus 7 ~~~~vLdiGcG~------G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~v~~-~~~d~~~~~~~~~~~fD~V 77 (210)
...+|||+|||+ |. ..+++. + ..+|+|+|+|+. . +++++ +++|+.+.+ ++ ++||+|
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v---~~v~~~i~gD~~~~~-~~-~~fD~V 127 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V---SDADSTLIGDCATVH-TA-NKWDLI 127 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B---CSSSEEEESCGGGCC-CS-SCEEEE
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C---CCCEEEEECccccCC-cc-CcccEE
Confidence 345899999955 66 333333 3 358999999987 1 47889 999999876 54 689999
Q ss_pred EECCccchh----ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 78 IDKGTLDSL----MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 78 i~~~~l~~~----~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+++...+.. ............+++++.++|||||.|++..+..
T Consensus 128 vsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 128 ISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp EECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred EEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 997542211 0111122446789999999999999999866543
No 253
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.19 E-value=2.6e-11 Score=101.60 Aligned_cols=102 Identities=18% Similarity=0.210 Sum_probs=77.1
Q ss_pred CCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
..+|||+|||+|.++..+++. +..+++|+|+++.+++.| .+++++++|+.+.. +.++||+|+++..+..
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------~~~~~~~~D~~~~~--~~~~fD~Ii~NPPy~~ 110 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------PWAEGILADFLLWE--PGEAFDLILGNPPYGI 110 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------TTEEEEESCGGGCC--CSSCEEEEEECCCCCC
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------CCCcEEeCChhhcC--ccCCCCEEEECcCccC
Confidence 458999999999999999875 445899999999998766 46899999998865 4578999999765532
Q ss_pred hccCC-----CchH-----------------HHHHHHHHHHHhccCCcEEEEEEc
Q 028385 86 LMCGT-----NAPI-----------------SASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 86 ~~~~~-----~~~~-----------------~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
..... .... ....+++.+.++|+|||.++++..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 111 VGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp BSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 21100 0011 123679999999999999988763
No 254
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.17 E-value=1.5e-10 Score=96.04 Aligned_cols=109 Identities=17% Similarity=0.156 Sum_probs=83.2
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCC---------------------------------------CcEEEEeCCHHHHHHH
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGY---------------------------------------EDIVNIDISSVAIDMM 46 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~---------------------------------------~~v~~vD~s~~~~~~a 46 (210)
.+..+|||++||+|.++..++..+. .+|+|+|+++.|++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 4457899999999999988876521 3699999999999999
Q ss_pred HHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccC--CcEEEEEEcC
Q 028385 47 KMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKP--GGIYMLITYG 119 (210)
Q Consensus 47 ~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~Lkp--gG~~~~~~~~ 119 (210)
+++... . .+++|.++|+.+++ . .++||+|+++..+..- .....+...+.+++.+.||+ ||.+++++-.
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~-~-~~~~D~Iv~NPPyg~r---l~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFK-S-EDEFGFIITNPPYGER---LEDKDSVKQLYKELGYAFRKLKNWSYYLITSY 346 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCC-C-SCBSCEEEECCCCCCS---HHHHHHHHHHHHHHHHHHHTSBSCEEEEEESC
T ss_pred HHHHHHcCCCCceEEEECChhhcC-c-CCCCcEEEECCCCcCc---cCCHHHHHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 998742 2 37999999999987 4 4589999998765321 01124567778888888877 8888877643
No 255
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.17 E-value=5.7e-11 Score=93.28 Aligned_cols=74 Identities=12% Similarity=0.265 Sum_probs=62.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCC----CCcccEEEECCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFE----DESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~----~~~fD~Vi~~~~ 82 (210)
...+|||||||+|.++..+++.+ .+|+++|+++.|++.++++....++++++++|+.+++ ++ +++|| |+++..
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~-~~~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFD-FSSVKTDKPLR-VVGNLP 105 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCC-GGGSCCSSCEE-EEEECC
T ss_pred CcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCC-HHHhccCCCeE-EEecCC
Confidence 34589999999999999999887 4899999999999999999876678999999999986 43 35788 666655
Q ss_pred c
Q 028385 83 L 83 (210)
Q Consensus 83 l 83 (210)
+
T Consensus 106 Y 106 (255)
T 3tqs_A 106 Y 106 (255)
T ss_dssp H
T ss_pred c
Confidence 4
No 256
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.16 E-value=3e-10 Score=94.48 Aligned_cols=109 Identities=16% Similarity=0.164 Sum_probs=81.1
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCC---------------------------------------CcEEEEeCCHHHHHHH
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGY---------------------------------------EDIVNIDISSVAIDMM 46 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~---------------------------------------~~v~~vD~s~~~~~~a 46 (210)
.+...|||.+||+|.++...+..+. .+|+|+|+++.|++.|
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 3456899999999999988876421 2599999999999999
Q ss_pred HHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccC--CcEEEEEEcC
Q 028385 47 KMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKP--GGIYMLITYG 119 (210)
Q Consensus 47 ~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~Lkp--gG~~~~~~~~ 119 (210)
+++... . .++++.++|+.+++ . .++||+|+++..+..- .........+.+++.+.||+ ||.+++++-.
T Consensus 280 r~Na~~~gl~~~I~~~~~D~~~~~-~-~~~fD~Iv~NPPYg~r---l~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 352 (393)
T 3k0b_A 280 KQNAVEAGLGDLITFRQLQVADFQ-T-EDEYGVVVANPPYGER---LEDEEAVRQLYREMGIVYKRMPTWSVYVLTSY 352 (393)
T ss_dssp HHHHHHTTCTTCSEEEECCGGGCC-C-CCCSCEEEECCCCCCS---HHHHHHHHHHHHHHHHHHHTCTTCEEEEEECC
T ss_pred HHHHHHcCCCCceEEEECChHhCC-C-CCCCCEEEECCCCccc---cCCchhHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 998743 2 35999999999987 4 4589999998654211 00124556667777777776 8888887743
No 257
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.15 E-value=4.5e-10 Score=93.14 Aligned_cols=109 Identities=13% Similarity=0.137 Sum_probs=83.7
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCC---------------------------------------CcEEEEeCCHHHHHHH
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGY---------------------------------------EDIVNIDISSVAIDMM 46 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~---------------------------------------~~v~~vD~s~~~~~~a 46 (210)
.+...|||.+||+|.++...+..+. .+++|+|+++.|++.|
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 3456899999999999988876421 2599999999999999
Q ss_pred HHhhcC--C-CCcEEEEcccCCCCCCCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccC--CcEEEEEEcC
Q 028385 47 KMKYEE--I-PQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKP--GGIYMLITYG 119 (210)
Q Consensus 47 ~~~~~~--~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~Lkp--gG~~~~~~~~ 119 (210)
+++... . .++++.++|+.+++ .+ ++||+|+++..+..- .....+...+.+++.+.||+ ||.+++++..
T Consensus 273 r~Na~~~gl~~~I~~~~~D~~~l~-~~-~~fD~Iv~NPPYG~r---l~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 345 (384)
T 3ldg_A 273 RKNAREVGLEDVVKLKQMRLQDFK-TN-KINGVLISNPPYGER---LLDDKAVDILYNEMGETFAPLKTWSQFILTND 345 (384)
T ss_dssp HHHHHHTTCTTTEEEEECCGGGCC-CC-CCSCEEEECCCCTTT---TSCHHHHHHHHHHHHHHHTTCTTSEEEEEESC
T ss_pred HHHHHHcCCCCceEEEECChHHCC-cc-CCcCEEEECCchhhc---cCCHHHHHHHHHHHHHHHhhCCCcEEEEEECC
Confidence 998743 2 35999999999987 44 589999998665321 12335677788888888876 9988888743
No 258
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.14 E-value=1.1e-10 Score=92.39 Aligned_cols=72 Identities=6% Similarity=0.058 Sum_probs=63.3
Q ss_pred CEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCC-cccEEEECCccc
Q 028385 10 DTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDE-SFDAVIDKGTLD 84 (210)
Q Consensus 10 ~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~-~fD~Vi~~~~l~ 84 (210)
+|||||||+|.++..+++.+. +|+++|+++.|++.++++... .+++++++|+.+++ +++. .+|.|+++..++
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~~~l~~~~~~-~~v~vi~~D~l~~~-~~~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLRPVLEETLSG-LPVRLVFQDALLYP-WEEVPQGSLLVANLPYH 121 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTTT-SSEEEEESCGGGSC-GGGSCTTEEEEEEECSS
T ss_pred eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCC-CCEEEEECChhhCC-hhhccCccEEEecCccc
Confidence 899999999999999999874 899999999999999998864 68999999999987 5542 689999987654
No 259
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.13 E-value=1e-10 Score=96.58 Aligned_cols=98 Identities=7% Similarity=0.138 Sum_probs=75.0
Q ss_pred CCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCC-CCCC--------------
Q 028385 9 RDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMS-FFED-------------- 71 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~-~~~~-------------- 71 (210)
.+|||+|||+|.++..+++.. .+|+++|+|+.+++.|+++.+ +..+++|+++|+.+.. .+..
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~-~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~ 293 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNF-DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKS 293 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGS-SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGG
T ss_pred CEEEEccCCCCHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccccc
Confidence 579999999999999888754 489999999999999998874 3368999999987642 0111
Q ss_pred CcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 72 ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 72 ~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
++||+|+....-. .+..++.+.|+++|.++.++++.
T Consensus 294 ~~fD~Vv~dPPr~-------------g~~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 294 YQCETIFVDPPRS-------------GLDSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp CCEEEEEECCCTT-------------CCCHHHHHHHTTSSEEEEEESCH
T ss_pred CCCCEEEECcCcc-------------ccHHHHHHHHhCCCEEEEEECCH
Confidence 3799999754322 12455677778999998888763
No 260
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.13 E-value=1.3e-10 Score=98.38 Aligned_cols=109 Identities=12% Similarity=0.123 Sum_probs=82.1
Q ss_pred CCCCEEEeCCCCchhHHHHHHc--------------CCCcEEEEeCCHHHHHHHHHhhc--CCC--CcEEEEcccCCCCC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD--------------GYEDIVNIDISSVAIDMMKMKYE--EIP--QLKYLQMDVRDMSF 68 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~--------------~~~~v~~vD~s~~~~~~a~~~~~--~~~--~v~~~~~d~~~~~~ 68 (210)
...+|||.|||+|.++..+++. ...+++|+|+++.+++.|+.+.. ... ++++.++|....+
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~- 249 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE- 249 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC-
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc-
Confidence 3468999999999999888763 22479999999999999998762 322 6789999988766
Q ss_pred CCCCcccEEEECCccchhccCCC----------chHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 69 FEDESFDAVIDKGTLDSLMCGTN----------APISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 69 ~~~~~fD~Vi~~~~l~~~~~~~~----------~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
. .++||+|+++..+........ .......+++++.++|||||++.++.
T Consensus 250 ~-~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 250 P-STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp C-SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c-cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 3 348999999987765321110 01123578999999999999998876
No 261
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.08 E-value=1.1e-10 Score=96.74 Aligned_cols=99 Identities=15% Similarity=0.044 Sum_probs=77.0
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc-----------------CCCCcEEEEcccCCCCCC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE-----------------EIPQLKYLQMDVRDMSFF 69 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~-----------------~~~~v~~~~~d~~~~~~~ 69 (210)
..+|||+|||+|..+..+++. +..+|+++|+++.+++.++++.+ +..+++++++|+.+....
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 458999999999999999987 55589999999999999998873 223589999998775311
Q ss_pred CCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 70 EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 70 ~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
..+.||+|+.... .....+++.+.+.||+||.++++.
T Consensus 128 ~~~~fD~I~lDP~-----------~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 128 RHRYFHFIDLDPF-----------GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp STTCEEEEEECCS-----------SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCEEEeCCC-----------CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 2457999996421 122577888999999999876654
No 262
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.05 E-value=1.8e-09 Score=87.02 Aligned_cols=111 Identities=8% Similarity=-0.040 Sum_probs=79.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcC--CCCcEEEEcccCCCCCCCC---CcccEEEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDVRDMSFFED---ESFDAVID 79 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~--~~~v~~~~~d~~~~~~~~~---~~fD~Vi~ 79 (210)
...+|||+|||+|..+..+++. +..+|+++|+++.+++.++++.+. ..++.++++|+.+++ ... ++||.|++
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~-~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVS-PSDPRYHEVHYILL 180 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSC-TTCGGGTTEEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcC-ccccccCCCCEEEE
Confidence 3458999999999999999875 445899999999999999998853 368999999998875 322 57999997
Q ss_pred CCccchhccC-C------------Cch----HHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 80 KGTLDSLMCG-T------------NAP----ISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 80 ~~~l~~~~~~-~------------~~~----~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
.......... . ... ....++++++.++|+ ||+++..+++
T Consensus 181 D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 181 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp CCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred cCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 5332111000 0 000 123457888888887 9998877765
No 263
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.00 E-value=3.5e-10 Score=93.85 Aligned_cols=99 Identities=22% Similarity=0.208 Sum_probs=77.0
Q ss_pred CCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhc--CCCC--cEEEEcccCCCCC-CCCCcccEEEEC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYE--EIPQ--LKYLQMDVRDMSF-FEDESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~--~~~~--v~~~~~d~~~~~~-~~~~~fD~Vi~~ 80 (210)
..+|||++||+|.++..++.. +..+|+++|+++.+++.++++.+ +..+ ++++++|+.+... ...+.||+|+..
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 468999999999999999985 44689999999999999999885 3344 8999999876421 114579999976
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
. . .....++..+.+.|++||++++..
T Consensus 133 P-~----------g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 133 P-F----------GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp C-S----------SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred C-C----------cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 4 1 112457888999999999876654
No 264
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.96 E-value=4.1e-09 Score=93.70 Aligned_cols=108 Identities=10% Similarity=0.074 Sum_probs=76.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHcC-------------------------------------------CCcEEEEeCCHHHH
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDG-------------------------------------------YEDIVNIDISSVAI 43 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~-------------------------------------------~~~v~~vD~s~~~~ 43 (210)
+...|||.+||+|.++...+..+ ...++|+|+++.|+
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 45689999999999998877531 13799999999999
Q ss_pred HHHHHhhcC--C-CCcEEEEcccCCCC-CCCCCcccEEEECCccchhccCCCchHHHHHH---HHHHHHhccCCcEEEEE
Q 028385 44 DMMKMKYEE--I-PQLKYLQMDVRDMS-FFEDESFDAVIDKGTLDSLMCGTNAPISASQM---LGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 44 ~~a~~~~~~--~-~~v~~~~~d~~~~~-~~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~---l~~i~r~LkpgG~~~~~ 116 (210)
+.|+++... . ..++|.++|+.++. ....++||+|+++..+..-. ....+...+ +.++.+.+.|||.++++
T Consensus 270 ~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rl---g~~~~l~~ly~~l~~~lk~~~~g~~~~il 346 (703)
T 3v97_A 270 QRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERL---DSEPALIALHSLLGRIMKNQFGGWNLSLF 346 (703)
T ss_dssp HHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC------CCHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccc---cchhHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 999998743 2 34899999999874 13344899999986643210 112334444 44555555689999888
Q ss_pred E
Q 028385 117 T 117 (210)
Q Consensus 117 ~ 117 (210)
+
T Consensus 347 t 347 (703)
T 3v97_A 347 S 347 (703)
T ss_dssp E
T ss_pred e
Confidence 6
No 265
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.95 E-value=2.6e-09 Score=83.49 Aligned_cols=73 Identities=8% Similarity=0.133 Sum_probs=59.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCC--cccEEEECCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDE--SFDAVIDKGTL 83 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~--~fD~Vi~~~~l 83 (210)
...+|||||||+|.++..+++.+..+|+++|+++.+++.++++ ...+++++++|+.+++ +++. .| .|+++..+
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~--~~~~v~~i~~D~~~~~-~~~~~~~~-~vv~NlPy 105 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI--GDERLEVINEDASKFP-FCSLGKEL-KVVGNLPY 105 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS--CCTTEEEECSCTTTCC-GGGSCSSE-EEEEECCT
T ss_pred CcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc--cCCCeEEEEcchhhCC-hhHccCCc-EEEEECch
Confidence 4468999999999999999998656999999999999999887 3468999999999987 5432 33 66665554
No 266
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.94 E-value=7.6e-10 Score=86.72 Aligned_cols=74 Identities=12% Similarity=0.059 Sum_probs=58.9
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCc--EEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCC-----CcccEEEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYED--IVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFED-----ESFDAVID 79 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~--v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~-----~~fD~Vi~ 79 (210)
...+|||||||+|.++. +.+ + .+ |+++|+++.|++.++++....++++++++|+.+++ +++ +..|.|++
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~-~~~~~~~~~~~~~vvs 96 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFN-FGELAEKMGQPLRVFG 96 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCC-HHHHHHHHTSCEEEEE
T ss_pred CcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCC-HHHhhcccCCceEEEE
Confidence 44689999999999999 654 3 36 99999999999999988765568999999999876 432 23468888
Q ss_pred CCccc
Q 028385 80 KGTLD 84 (210)
Q Consensus 80 ~~~l~ 84 (210)
+..+.
T Consensus 97 NlPY~ 101 (252)
T 1qyr_A 97 NLPYN 101 (252)
T ss_dssp ECCTT
T ss_pred CCCCC
Confidence 76643
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.94 E-value=3.4e-10 Score=89.01 Aligned_cols=77 Identities=9% Similarity=-0.049 Sum_probs=61.1
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCH-------HHHHHHHHhhcC--C-CCcEEEEcccCCC-CCCCC--Ccc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISS-------VAIDMMKMKYEE--I-PQLKYLQMDVRDM-SFFED--ESF 74 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~-------~~~~~a~~~~~~--~-~~v~~~~~d~~~~-~~~~~--~~f 74 (210)
..+|||+|||+|..+..+++.+. +|+++|+++ .+++.|+++.+. . .+++++++|+.+. +.+++ ++|
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~f 162 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKP 162 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCC
T ss_pred cCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCc
Confidence 46899999999999999999865 899999999 999999876532 2 3499999999874 21334 789
Q ss_pred cEEEECCccch
Q 028385 75 DAVIDKGTLDS 85 (210)
Q Consensus 75 D~Vi~~~~l~~ 85 (210)
|+|++..++.+
T Consensus 163 D~V~~dP~~~~ 173 (258)
T 2r6z_A 163 DIVYLDPMYPE 173 (258)
T ss_dssp SEEEECCCC--
T ss_pred cEEEECCCCCC
Confidence 99999877655
No 268
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.91 E-value=1.8e-09 Score=85.75 Aligned_cols=74 Identities=7% Similarity=0.022 Sum_probs=58.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCC---cEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCC------cccEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYE---DIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDE------SFDAV 77 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~------~fD~V 77 (210)
...+|||||||+|.++..+++.+.. +|+++|+++.|++.++++. .++++++++|+.+++ +++- ..+.|
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~~~v~~i~~D~~~~~-~~~~~~~~~~~~~~v 118 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--GELLELHAGDALTFD-FGSIARPGDEPSLRI 118 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--GGGEEEEESCGGGCC-GGGGSCSSSSCCEEE
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--CCCcEEEECChhcCC-hhHhcccccCCceEE
Confidence 3468999999999999999987542 2999999999999999884 468999999999987 4321 23467
Q ss_pred EECCcc
Q 028385 78 IDKGTL 83 (210)
Q Consensus 78 i~~~~l 83 (210)
+++..+
T Consensus 119 v~NlPY 124 (279)
T 3uzu_A 119 IGNLPY 124 (279)
T ss_dssp EEECCH
T ss_pred EEccCc
Confidence 766554
No 269
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.89 E-value=1.6e-08 Score=83.47 Aligned_cols=115 Identities=13% Similarity=-0.033 Sum_probs=79.8
Q ss_pred CCCEEEeCCCCchhHHHHHHc------------------CCCcEEEEeCC-----------HHHHHHHHHhhcCCCCcEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD------------------GYEDIVNIDIS-----------SVAIDMMKMKYEEIPQLKY 58 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~------------------~~~~v~~vD~s-----------~~~~~~a~~~~~~~~~v~~ 58 (210)
..+|+|+||++|.++..+... +.-+|+..|.. +.+.+.+++......+-.|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999999999887653 11257888887 6666555443322123456
Q ss_pred EEcccCCCC--CCCCCcccEEEECCccchhccCCCc--------------------------------hHHHHHHHHHHH
Q 028385 59 LQMDVRDMS--FFEDESFDAVIDKGTLDSLMCGTNA--------------------------------PISASQMLGEVS 104 (210)
Q Consensus 59 ~~~d~~~~~--~~~~~~fD~Vi~~~~l~~~~~~~~~--------------------------------~~~~~~~l~~i~ 104 (210)
+.+...++- -|++++||+|+++.+|||+.-.... ..+...+|+..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666655531 2889999999999999997422111 123344588889
Q ss_pred HhccCCcEEEEEEcCCch
Q 028385 105 RLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 105 r~LkpgG~~~~~~~~~p~ 122 (210)
+.|+|||++++...+.+.
T Consensus 213 ~eL~pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 213 EELISRGRMLLTFICKED 230 (384)
T ss_dssp HHEEEEEEEEEEEECCCT
T ss_pred HHhccCCeEEEEEecCCC
Confidence 999999999998877654
No 270
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.88 E-value=1.3e-08 Score=80.99 Aligned_cols=106 Identities=19% Similarity=0.309 Sum_probs=81.1
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc-------CCCCcEEEEcccCCCCCCCCCcccEEEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE-------EIPQLKYLQMDVRDMSFFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~-------~~~~v~~~~~d~~~~~~~~~~~fD~Vi~ 79 (210)
..+||-||.|.|..+..++++ +..+++.+|+++.+++.+++... +-++++++.+|+...-.-..++||+|+.
T Consensus 84 pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~ 163 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEE
T ss_pred CCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEE
Confidence 468999999999999999987 45689999999999999998752 1278999999998853245678999997
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
... +....+ ..---...++.+++.|+|||+++..
T Consensus 164 D~~-dp~~~~--~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 164 DCT-DPIGPG--ESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp SCC-CCCCTT--CCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred eCC-CcCCCc--hhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 532 111000 0011246789999999999999764
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.88 E-value=2.2e-09 Score=92.77 Aligned_cols=111 Identities=9% Similarity=-0.016 Sum_probs=80.4
Q ss_pred CCCCEEEeCCCCchhHHHHHHc----C---------------CCcEEEEeCCHHHHHHHHHhhc--CCCC-----cEEEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD----G---------------YEDIVNIDISSVAIDMMKMKYE--EIPQ-----LKYLQ 60 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~----~---------------~~~v~~vD~s~~~~~~a~~~~~--~~~~-----v~~~~ 60 (210)
...+|||.+||+|.++..+++. . ...++|+|+++.+++.|+.+.. ...+ ..+.+
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 3468999999999999877653 1 1369999999999999998763 2233 78899
Q ss_pred cccCCCCCCCCCcccEEEECCccchhccCC-------CchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 61 MDVRDMSFFEDESFDAVIDKGTLDSLMCGT-------NAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 61 ~d~~~~~~~~~~~fD~Vi~~~~l~~~~~~~-------~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+|....+....++||+|+++..+....... ........++.++.+.|||||++.++.
T Consensus 249 gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 249 GNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp SCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 998664313457899999987765431110 001223478999999999999988876
No 272
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.88 E-value=8.1e-10 Score=91.94 Aligned_cols=75 Identities=7% Similarity=-0.025 Sum_probs=61.7
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc----CCCCcEEEEcccCCC-CCCCCCcccEEEECCc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE----EIPQLKYLQMDVRDM-SFFEDESFDAVIDKGT 82 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~v~~~~~d~~~~-~~~~~~~fD~Vi~~~~ 82 (210)
..+|||+|||+|..+..+++.+. +|+++|+|+.+++.|+++.+ +..+++++++|+.+. +.+.+++||+|++...
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDPP 172 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDPA 172 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECCE
T ss_pred CCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECCC
Confidence 46899999999999999988765 89999999999999999875 336899999999874 3112458999998654
Q ss_pred c
Q 028385 83 L 83 (210)
Q Consensus 83 l 83 (210)
.
T Consensus 173 r 173 (410)
T 3ll7_A 173 R 173 (410)
T ss_dssp E
T ss_pred C
Confidence 3
No 273
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.85 E-value=3e-09 Score=92.88 Aligned_cols=97 Identities=14% Similarity=0.161 Sum_probs=68.4
Q ss_pred CCEEEeCCCCchhHHHHHHc---CCC--cEEEEeCCHHHHHHHHHhhc--CC-CCcEEEEcccCCCCCCCCCcccEEEEC
Q 028385 9 RDTCRRAAPSIVMSEDMVKD---GYE--DIVNIDISSVAIDMMKMKYE--EI-PQLKYLQMDVRDMSFFEDESFDAVIDK 80 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~~---~~~--~v~~vD~s~~~~~~a~~~~~--~~-~~v~~~~~d~~~~~~~~~~~fD~Vi~~ 80 (210)
..|||+|||+|.++...++. +.. +|++||-|+.+.. +++..+ +. +.|+++.+|++++. .| +++|+||+-
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~-a~~~v~~N~~~dkVtVI~gd~eev~-LP-EKVDIIVSE 435 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVV-TLENWQFEEWGSQVTVVSSDMREWV-AP-EKADIIVSE 435 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHH-HHHHHHHHTTGGGEEEEESCTTTCC-CS-SCEEEEECC
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHH-HHHHHHhccCCCeEEEEeCcceecc-CC-cccCEEEEE
Confidence 46999999999996555443 332 6899999986554 444432 22 67999999999987 54 689999983
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEE
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIY 113 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~ 113 (210)
. +..++.. +....++....|.|||||.+
T Consensus 436 w-MG~fLl~----E~mlevL~Ardr~LKPgGim 463 (637)
T 4gqb_A 436 L-LGSFADN----ELSPECLDGAQHFLKDDGVS 463 (637)
T ss_dssp C-CBTTBGG----GCHHHHHHHHGGGEEEEEEE
T ss_pred c-Ccccccc----cCCHHHHHHHHHhcCCCcEE
Confidence 2 2222222 22346888899999999986
No 274
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.84 E-value=3.1e-09 Score=83.15 Aligned_cols=108 Identities=6% Similarity=-0.068 Sum_probs=70.3
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
..+|||+|||+|.|+..+++. +...+.++|++..+............++.....++.... +.++.||+|++....+
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~-l~~~~~DlVlsD~apn-- 151 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHR-LEPVKCDTLLCDIGES-- 151 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTT-SCCCCCSEEEECCCCC--
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehh-cCCCCccEEEecCccC--
Confidence 347999999999999988775 555788999885431000000000025566667665555 7788999999987554
Q ss_pred ccCCCchHHH--HHHHHHHHHhccCC-cEEEEEEcC
Q 028385 87 MCGTNAPISA--SQMLGEVSRLLKPG-GIYMLITYG 119 (210)
Q Consensus 87 ~~~~~~~~~~--~~~l~~i~r~Lkpg-G~~~~~~~~ 119 (210)
.|....+.. ..+++.+.++|||| |.|++-.|.
T Consensus 152 -sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 152 -SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred -cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 111111221 23578899999999 999886665
No 275
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.82 E-value=2.9e-09 Score=85.46 Aligned_cols=75 Identities=15% Similarity=0.194 Sum_probs=61.1
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCCC----CCCCcccEEEEC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSF----FEDESFDAVIDK 80 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~----~~~~~fD~Vi~~ 80 (210)
...+|||+|||+|..+..+++. +..+|+++|+|+.|++.|+++.... .+++++++|+.+++. ...++||.|++.
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D 105 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMD 105 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEEEc
Confidence 3468999999999999999987 3458999999999999999988543 689999999988641 112589999874
Q ss_pred C
Q 028385 81 G 81 (210)
Q Consensus 81 ~ 81 (210)
.
T Consensus 106 ~ 106 (301)
T 1m6y_A 106 L 106 (301)
T ss_dssp C
T ss_pred C
Confidence 3
No 276
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.80 E-value=1.7e-08 Score=83.16 Aligned_cols=115 Identities=11% Similarity=0.037 Sum_probs=77.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHc----------------CCCcEEEEeCCHHHHHHHHHhhcCC--------------CCc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD----------------GYEDIVNIDISSVAIDMMKMKYEEI--------------PQL 56 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~----------------~~~~v~~vD~s~~~~~~a~~~~~~~--------------~~v 56 (210)
...+|+|+|||+|.++..+... +.-+|..-|...+.-...=+..... .+-
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 3578999999999999887321 2236888887766544333332210 011
Q ss_pred EEEEcccCC---CCCCCCCcccEEEECCccchhccCCC-------------------------------chHHHHHHHHH
Q 028385 57 KYLQMDVRD---MSFFEDESFDAVIDKGTLDSLMCGTN-------------------------------APISASQMLGE 102 (210)
Q Consensus 57 ~~~~~d~~~---~~~~~~~~fD~Vi~~~~l~~~~~~~~-------------------------------~~~~~~~~l~~ 102 (210)
.|..+...+ -. ||+++||+|+++.+|||+.-... ...+...+|+.
T Consensus 132 ~f~~gvpgSFy~rl-fP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 132 YFVAGVPGSFYRRL-FPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp SEEEEEESCTTSCC-SCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhccc-CCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 244444333 23 88999999999999999841110 01266778999
Q ss_pred HHHhccCCcEEEEEEcCCch
Q 028385 103 VSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 103 i~r~LkpgG~~~~~~~~~p~ 122 (210)
.++.|+|||++++...+.+.
T Consensus 211 ra~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHHHEEEEEEEEEEEEECCC
T ss_pred HHHHhCCCCEEEEEEecCCC
Confidence 99999999999988876543
No 277
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.80 E-value=4e-09 Score=92.28 Aligned_cols=101 Identities=16% Similarity=0.114 Sum_probs=72.0
Q ss_pred CCCEEEeCCCCchhHHHHHHc----C----------CCcEEEEeCCHHHHHHHHHhhc-CC-CCcEEEEcccCCCCCCC-
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD----G----------YEDIVNIDISSVAIDMMKMKYE-EI-PQLKYLQMDVRDMSFFE- 70 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~----~----------~~~v~~vD~s~~~~~~a~~~~~-~~-~~v~~~~~d~~~~~~~~- 70 (210)
...|||+|||+|.++...++. + ..+|++||.|+.++...+.+.. .. +.|+++.+|++++. .+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~-lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLP-GIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHH-HHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcc-ccc
Confidence 346999999999997543221 1 2389999999988766665543 33 56999999999986 53
Q ss_pred ----CCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEE
Q 028385 71 ----DESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYM 114 (210)
Q Consensus 71 ----~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~ 114 (210)
.++.|+||+-.. ..++ ..+-...++..+.|.|||||.++
T Consensus 489 ~~~~~ekVDIIVSElm-Gsfl----~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELL-GSFG----DNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCC-BTTB----GGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEecc-cccc----chhccHHHHHHHHHhCCCCcEEE
Confidence 578999998433 1111 11345668888899999999763
No 278
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.77 E-value=5.4e-08 Score=73.39 Aligned_cols=96 Identities=7% Similarity=-0.084 Sum_probs=69.5
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-----CCCcEEEEcccCCC---------------C
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-----IPQLKYLQMDVRDM---------------S 67 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~v~~~~~d~~~~---------------~ 67 (210)
..+|||+||| ..+..+++....+|+.+|.+++..+.|++..+. ..+++++.+|+... +
T Consensus 31 a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~ 108 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYP 108 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTT
T ss_pred CCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHH
Confidence 4579999985 566666665345899999999999999988743 34799999996542 1
Q ss_pred C-------C-CCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 68 F-------F-EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 68 ~-------~-~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
. . ..++||+|+..+- .....+..+.+.|+|||++++-.
T Consensus 109 ~~~~~i~~~~~~~~fDlIfIDg~------------k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 109 DYPLAVWRTEGFRHPDVVLVDGR------------FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp HHHHGGGGCTTCCCCSEEEECSS------------SHHHHHHHHHHHCSSCEEEEETT
T ss_pred HHhhhhhccccCCCCCEEEEeCC------------CchhHHHHHHHhcCCCeEEEEeC
Confidence 0 1 2378999996542 11355666779999999996544
No 279
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.73 E-value=7.3e-08 Score=83.16 Aligned_cols=111 Identities=12% Similarity=0.063 Sum_probs=81.1
Q ss_pred CCCCEEEeCCCCchhHHHHHHc----CCCcEEEEeCCHHHHHHHHHhh--cCC--CCcEEEEcccCCC--CCCCCCcccE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD----GYEDIVNIDISSVAIDMMKMKY--EEI--PQLKYLQMDVRDM--SFFEDESFDA 76 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~----~~~~v~~vD~s~~~~~~a~~~~--~~~--~~v~~~~~d~~~~--~~~~~~~fD~ 76 (210)
...+|||.+||+|.+...+++. +..+++|+|+++.++..|+.+. .+. +++.+.++|.... +......||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 4568999999999998888765 2457999999999999999875 233 4678999998765 3245678999
Q ss_pred EEECCccchhc--------------cC-CCchH-HHHHHHHHHHHhcc-CCcEEEEEE
Q 028385 77 VIDKGTLDSLM--------------CG-TNAPI-SASQMLGEVSRLLK-PGGIYMLIT 117 (210)
Q Consensus 77 Vi~~~~l~~~~--------------~~-~~~~~-~~~~~l~~i~r~Lk-pgG~~~~~~ 117 (210)
|+++..+..-. ++ ..+.. .--..+.++.+.|| +||++.++.
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEE
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEe
Confidence 99987664210 01 00000 11258999999999 999988776
No 280
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.72 E-value=7e-09 Score=81.38 Aligned_cols=93 Identities=9% Similarity=0.020 Sum_probs=63.9
Q ss_pred CCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc---------C-C-CCcEEEEcccCCC-CCCCCCcccE
Q 028385 9 RDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE---------E-I-PQLKYLQMDVRDM-SFFEDESFDA 76 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---------~-~-~~v~~~~~d~~~~-~~~~~~~fD~ 76 (210)
.+|||+|||+|..+..++..+. +|+++|.++.+...+++..+ + . .+++++++|+.++ +.++ ++||+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~-~~fDv 167 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDIT-PRPQV 167 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCS-SCCSE
T ss_pred CEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCc-ccCCE
Confidence 6899999999999999999876 89999999987666554431 1 1 4689999999873 3233 47999
Q ss_pred EEECCccchhccCCCchHHHHHHHHHHHHhccCCc
Q 028385 77 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGG 111 (210)
Q Consensus 77 Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG 111 (210)
|+....+.+- . ...++++..++|++.+
T Consensus 168 V~lDP~y~~~-----~---~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 168 VYLDPMFPHK-----Q---KSALVKKEMRVFQSLV 194 (258)
T ss_dssp EEECCCCCCC-----C---C-----HHHHHHHHHS
T ss_pred EEEcCCCCCc-----c---cchHHHHHHHHHHHhh
Confidence 9988766442 1 1144455555555544
No 281
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.66 E-value=6.5e-08 Score=79.33 Aligned_cols=109 Identities=18% Similarity=0.099 Sum_probs=78.1
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC----------CCcEEEEcccCCCC-C--CCCCcc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI----------PQLKYLQMDVRDMS-F--FEDESF 74 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------~~v~~~~~d~~~~~-~--~~~~~f 74 (210)
..+||-||.|.|..+..+++++..+++.+|+++.+++.+++..... ++++++..|+...- . -..++|
T Consensus 206 pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~y 285 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREF 285 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCE
T ss_pred CCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCce
Confidence 3589999999999999999987778999999999999999876321 45889999987631 0 134689
Q ss_pred cEEEECCccchhcc---CCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 75 DAVIDKGTLDSLMC---GTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 75 D~Vi~~~~l~~~~~---~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
|+|+....-..... +.....-.+++++.+++.|+|||+++..
T Consensus 286 DvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 286 DYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp EEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred eEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 99997432110000 0001112357789999999999999653
No 282
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.62 E-value=8.7e-08 Score=78.43 Aligned_cols=115 Identities=11% Similarity=-0.002 Sum_probs=84.4
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-----------------CCCcEEEEeCCHHHHHHHHHhhcCC---CCcEEEEcccCC-
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-----------------GYEDIVNIDISSVAIDMMKMKYEEI---PQLKYLQMDVRD- 65 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-----------------~~~~v~~vD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~- 65 (210)
...+|+|+||++|.++..+... +.-+|+..|...+.....-+..... .+-.|+.+...+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 4578999999999888665432 1136889999988888777766431 123566665555
Q ss_pred --CCCCCCCcccEEEECCccchhccCC--------------------------CchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 66 --MSFFEDESFDAVIDKGTLDSLMCGT--------------------------NAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 66 --~~~~~~~~fD~Vi~~~~l~~~~~~~--------------------------~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
-. |+++++|+|+++.+|||+.-.. ....+...+|+..++.|+|||++++..
T Consensus 131 y~rl-fp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 131 YGRL-FPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSCC-SCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhcc-CCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 34 8999999999999999974211 013467788999999999999999888
Q ss_pred cCCch
Q 028385 118 YGDPK 122 (210)
Q Consensus 118 ~~~p~ 122 (210)
.+.+.
T Consensus 210 ~gr~~ 214 (359)
T 1m6e_X 210 LGRRS 214 (359)
T ss_dssp EECSS
T ss_pred ecCCC
Confidence 76544
No 283
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.61 E-value=2e-07 Score=82.90 Aligned_cols=111 Identities=14% Similarity=0.023 Sum_probs=75.8
Q ss_pred CCCCEEEeCCCCchhHHHHHHcC----CCcEEEEeCCHHHHHHH--HHhhcC------CCCcEEEEcccCCCCCCCCCcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDG----YEDIVNIDISSVAIDMM--KMKYEE------IPQLKYLQMDVRDMSFFEDESF 74 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~----~~~v~~vD~s~~~~~~a--~~~~~~------~~~v~~~~~d~~~~~~~~~~~f 74 (210)
...+|||.|||+|.++..+++.. ..+++|+|+++.+++.| +.+... .....+...|+........+.|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 35689999999999999988752 24799999999999999 443321 1223566666655321345789
Q ss_pred cEEEECCccchhccC----------------------CCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 75 DAVIDKGTLDSLMCG----------------------TNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 75 D~Vi~~~~l~~~~~~----------------------~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
|+|+++..+-..... .........++..+.+.||+||++.++.
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIl 465 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIM 465 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEE
Confidence 999999776210000 0000123457889999999999998876
No 284
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.59 E-value=1e-07 Score=82.33 Aligned_cols=109 Identities=13% Similarity=-0.044 Sum_probs=76.6
Q ss_pred CCEEEeCCCCchhHHHHHHc--------C--------CCcEEEEeCCHHHHHHHHHhhc--CC-CCcEEEEcccCCCCCC
Q 028385 9 RDTCRRAAPSIVMSEDMVKD--------G--------YEDIVNIDISSVAIDMMKMKYE--EI-PQLKYLQMDVRDMSFF 69 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~~--------~--------~~~v~~vD~s~~~~~~a~~~~~--~~-~~v~~~~~d~~~~~~~ 69 (210)
.+|||.+||+|.+...+++. . ...++|+|+++.++..|+.+.. .. .++.+.++|....+.+
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 38999999999998776532 1 2379999999999999998762 22 2344477886655435
Q ss_pred CCCcccEEEECCccchhc-------------cC--------CCchH-HHHHHHHHHHHhccCCcEEEEEE
Q 028385 70 EDESFDAVIDKGTLDSLM-------------CG--------TNAPI-SASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 70 ~~~~fD~Vi~~~~l~~~~-------------~~--------~~~~~-~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.+.+||+|+++..+..-. ++ ..+.. .--..+.++.+.|||||++.++.
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVl 395 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLL 395 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEe
Confidence 678999999987764310 11 00011 11268999999999999988776
No 285
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.57 E-value=2.6e-08 Score=78.08 Aligned_cols=108 Identities=9% Similarity=-0.065 Sum_probs=68.1
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
..+|||+|||+|.|+..+++. +...++|+|++..+...+........++.....++.... ++.+.+|+|+|....+
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~-l~~~~~DvVLSDmApn-- 167 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFN-MEVIPGDTLLCDIGES-- 167 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGG-SCCCCCSEEEECCCCC--
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhh-cCCCCcCEEEecCccC--
Confidence 347999999999999987754 666799999986532211110000123334443333334 5678999999987654
Q ss_pred ccCCCchHH--HHHHHHHHHHhccCC--cEEEEEEcC
Q 028385 87 MCGTNAPIS--ASQMLGEVSRLLKPG--GIYMLITYG 119 (210)
Q Consensus 87 ~~~~~~~~~--~~~~l~~i~r~Lkpg--G~~~~~~~~ 119 (210)
.|....+. ...+++-+.++|||| |.|++-.|.
T Consensus 168 -sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 168 -SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred -CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 12111122 223577788999999 999887666
No 286
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.46 E-value=1.5e-07 Score=73.86 Aligned_cols=111 Identities=13% Similarity=0.137 Sum_probs=71.2
Q ss_pred CCCCEEEeCCCCchhHHHHHH--------cC-----CCcEEEEeCCH---HHHH-----------HHHHhhcC-------
Q 028385 7 GTRDTCRRAAPSIVMSEDMVK--------DG-----YEDIVNIDISS---VAID-----------MMKMKYEE------- 52 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~--------~~-----~~~v~~vD~s~---~~~~-----------~a~~~~~~------- 52 (210)
...+|||+|+|+|..+..+++ .+ ..+++++|..| +++. .+++..+.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 346899999999998877654 22 13799999876 5444 34443221
Q ss_pred ---------CCCcEEEEcccCC-CCCCCC---CcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 53 ---------IPQLKYLQMDVRD-MSFFED---ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 53 ---------~~~v~~~~~d~~~-~~~~~~---~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
..++++..+|+.+ ++..++ ..||+|+.... .....+.-=...+++.+.++|||||.++ +|+
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~f----sp~~~p~lw~~~~l~~l~~~L~pGG~l~--tys 213 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGF----APAKNPDMWTQNLFNAMARLARPGGTLA--TFT 213 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSS----CTTTCGGGCCHHHHHHHHHHEEEEEEEE--ESC
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCC----CcccChhhcCHHHHHHHHHHcCCCcEEE--EEe
Confidence 1357789999887 442222 37999996421 1111111114678999999999999986 455
Q ss_pred Cchh
Q 028385 120 DPKA 123 (210)
Q Consensus 120 ~p~~ 123 (210)
....
T Consensus 214 aa~~ 217 (257)
T 2qy6_A 214 SAGF 217 (257)
T ss_dssp CBHH
T ss_pred CCHH
Confidence 4443
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.46 E-value=1.4e-07 Score=66.92 Aligned_cols=85 Identities=14% Similarity=0.122 Sum_probs=62.8
Q ss_pred CCCEEEeCCCCc-hhHHHHHH-cCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCC--CcccEEEECCcc
Q 028385 8 TRDTCRRAAPSI-VMSEDMVK-DGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFED--ESFDAVIDKGTL 83 (210)
Q Consensus 8 ~~~vLdiGcG~G-~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~--~~fD~Vi~~~~l 83 (210)
..+|||||||+| ..+..|++ .+. +|+++|+++.+++ +++.|+.+.. .+ +.||+|.+..
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~-------------~v~dDiF~P~--~~~Y~~~DLIYsir-- 97 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG-------------IVRDDITSPR--MEIYRGAALIYSIR-- 97 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT-------------EECCCSSSCC--HHHHTTEEEEEEES--
T ss_pred CCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc-------------eEEccCCCCc--ccccCCcCEEEEcC--
Confidence 469999999999 69999997 666 8999999986544 7888887732 22 4799998743
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+..+++..+-++.+. -|.-+++..++.
T Consensus 98 --------PP~El~~~i~~lA~~--v~adliI~pL~~ 124 (153)
T 2k4m_A 98 --------PPAEIHSSLMRVADA--VGARLIIKPLTG 124 (153)
T ss_dssp --------CCTTTHHHHHHHHHH--HTCEEEEECBTT
T ss_pred --------CCHHHHHHHHHHHHH--cCCCEEEEcCCC
Confidence 235566667777664 467787776654
No 288
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.44 E-value=6.2e-07 Score=71.05 Aligned_cols=104 Identities=13% Similarity=0.055 Sum_probs=77.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHc------CCCcEEEEeCCHH--------------------------HHHHHHHhhcC--
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD------GYEDIVNIDISSV--------------------------AIDMMKMKYEE-- 52 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~------~~~~v~~vD~s~~--------------------------~~~~a~~~~~~-- 52 (210)
..++|||+|+..|..+..++.. ...+++++|..+. .++.++++++.
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 3568999999999988887642 2458999996421 35566766642
Q ss_pred C--CCcEEEEcccCC-CCCCCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 53 I--PQLKYLQMDVRD-MSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 53 ~--~~v~~~~~d~~~-~~~~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
. ++++++.+|+.+ ++.+++++||+|+..... . ......++.+...|+|||++++-++.
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y-------~~~~~~Le~~~p~L~pGGiIv~DD~~ 246 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--Y-------ESTWDTLTNLYPKVSVGGYVIVDDYM 246 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--H-------HHHHHHHHHHGGGEEEEEEEEESSCT
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--c-------ccHHHHHHHHHhhcCCCEEEEEcCCC
Confidence 2 679999999977 454556789999975432 2 45678899999999999999877663
No 289
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.39 E-value=2.1e-06 Score=70.22 Aligned_cols=95 Identities=11% Similarity=0.036 Sum_probs=67.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
...++||+||++|.|+..+++++. .|++||+.+-. ......++|++.++|+.... .+.+.||+|+|.....
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l~-----~~l~~~~~V~~~~~d~~~~~-~~~~~~D~vvsDm~~~-- 281 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPMA-----QSLMDTGQVTWLREDGFKFR-PTRSNISWMVCDMVEK-- 281 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCCC-----HHHHTTTCEEEECSCTTTCC-CCSSCEEEEEECCSSC--
T ss_pred CCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhcC-----hhhccCCCeEEEeCcccccc-CCCCCcCEEEEcCCCC--
Confidence 346899999999999999999876 89999987521 11223378999999999877 6677899999976543
Q ss_pred ccCCCchHHHHHHHHHHHHhccCC---cEEEEEEcC
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPG---GIYMLITYG 119 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~Lkpg---G~~~~~~~~ 119 (210)
+...+.-+.++|..+ +.++.+.+.
T Consensus 282 ---------p~~~~~l~~~wl~~~~~~~aI~~lKL~ 308 (375)
T 4auk_A 282 ---------PAKVAALMAQWLVNGWCRETIFNLKLP 308 (375)
T ss_dssp ---------HHHHHHHHHHHHHTTSCSEEEEEEECC
T ss_pred ---------hHHhHHHHHHHHhccccceEEEEEEec
Confidence 233444444444443 555555543
No 290
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.30 E-value=1.7e-06 Score=68.11 Aligned_cols=71 Identities=14% Similarity=0.184 Sum_probs=59.7
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC----CCCCCcccEEEEC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----FFEDESFDAVIDK 80 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~----~~~~~~fD~Vi~~ 80 (210)
..+.++|.+||.|..+..+++.+ .+|+|+|.++.+++.+++ ... +++.++++|+.+++ ....+++|.|+..
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~~-g~VigiD~Dp~Ai~~A~~-L~~-~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILERG-GRVIGLDQDPEAVARAKG-LHL-PGLTVVQGNFRHLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHH-TCC-TTEEEEESCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHCC-CEEEEEeCCHHHHHHHHh-hcc-CCEEEEECCcchHHHHHHHcCCCCcCEEEeC
Confidence 34579999999999999999984 489999999999999999 765 78999999999864 1233679999974
No 291
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.30 E-value=1.1e-06 Score=69.39 Aligned_cols=108 Identities=6% Similarity=-0.098 Sum_probs=67.1
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcC-CCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~-~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
...+|||+||++|.|+..+++. +...|+|+|+...+...... ... ..++.....++.... +..+.+|+|++...-+
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~~iv~~~~~~di~~-l~~~~~DlVlsD~APn 158 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGWNIVKFKDKSNVFT-MPTEPSDTLLCDIGES 158 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCTTT-SCCCCCSEEEECCCCC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCCceEEeecCceeee-cCCCCcCEEeecCcCC
Confidence 3468999999999999999975 55578999987542110000 000 013333333333233 5678999999976544
Q ss_pred hhccCCCchH--HHHHHHHHHHHhccCC-cEEEEEEcC
Q 028385 85 SLMCGTNAPI--SASQMLGEVSRLLKPG-GIYMLITYG 119 (210)
Q Consensus 85 ~~~~~~~~~~--~~~~~l~~i~r~Lkpg-G~~~~~~~~ 119 (210)
.|....+ ....+++-+.++|+|| |.|++-.|.
T Consensus 159 ---sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 159 ---SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp ---CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 1211111 1234577788999999 999887766
No 292
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.26 E-value=1.7e-06 Score=70.87 Aligned_cols=113 Identities=16% Similarity=0.143 Sum_probs=81.0
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCC-CcEEEEeCCHHHHHHHHHhhcC--------CCCcEEEEcccCCCCCCCCCcccEE
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGY-EDIVNIDISSVAIDMMKMKYEE--------IPQLKYLQMDVRDMSFFEDESFDAV 77 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~--------~~~v~~~~~d~~~~~~~~~~~fD~V 77 (210)
...+|||+.||.|.=+..+++... ..++++|+++.-+...+++... ..++.+...|...++....+.||.|
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~V 227 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRV 227 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEE
Confidence 345899999999999988888633 3699999999998888876631 1468888899887542456789999
Q ss_pred EECCccchh---ccCCC-------ch-------HHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 78 IDKGTLDSL---MCGTN-------AP-------ISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 78 i~~~~l~~~---~~~~~-------~~-------~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
++......- ..... .. .-..++|.+..+.|||||+++-.+++
T Consensus 228 LlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCS 286 (359)
T 4fzv_A 228 LVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCS 286 (359)
T ss_dssp EEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred EECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCC
Confidence 975432110 00000 01 12457899999999999999887776
No 293
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.08 E-value=5e-06 Score=66.98 Aligned_cols=74 Identities=11% Similarity=0.026 Sum_probs=57.4
Q ss_pred CCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCC----CC-CCcccEEEEC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF----FE-DESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~----~~-~~~fD~Vi~~ 80 (210)
.+.++|..||.|..+..+++. +..+|+|+|.++.+++.++ +.. ..+++++.++..++.. .. .+++|.|+..
T Consensus 58 ggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~-~~Rv~lv~~nF~~l~~~L~~~g~~~~vDgILfD 135 (347)
T 3tka_A 58 DGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID-DPRFSIIHGPFSALGEYVAERDLIGKIDGILLD 135 (347)
T ss_dssp TCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC-CTTEEEEESCGGGHHHHHHHTTCTTCEEEEEEE
T ss_pred CCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc-CCcEEEEeCCHHHHHHHHHhcCCCCcccEEEEC
Confidence 457899999999999999986 3458999999999999994 543 3689999999988631 11 1369988875
Q ss_pred Ccc
Q 028385 81 GTL 83 (210)
Q Consensus 81 ~~l 83 (210)
..+
T Consensus 136 LGV 138 (347)
T 3tka_A 136 LGV 138 (347)
T ss_dssp CSC
T ss_pred Ccc
Confidence 443
No 294
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.98 E-value=7.5e-06 Score=63.32 Aligned_cols=103 Identities=10% Similarity=-0.080 Sum_probs=61.0
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC-CCc---EEEEc-ccCCCCCCCCCcccEEEECC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI-PQL---KYLQM-DVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-~~v---~~~~~-d~~~~~~~~~~~fD~Vi~~~ 81 (210)
..+|+|+||+.|.|+...++. +...|.|.++.... . ..-.... +++ +|.++ |+.+++ ...+|+|+|..
T Consensus 74 g~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~--~~P~~~~~~Gv~~i~~~~G~Df~~~~---~~~~DvVLSDM 147 (269)
T 2px2_A 74 IGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H--EEPMLMQSYGWNIVTMKSGVDVFYKP---SEISDTLLCDI 147 (269)
T ss_dssp CEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S--CCCCCCCSTTGGGEEEECSCCGGGSC---CCCCSEEEECC
T ss_pred CCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c--cCCCcccCCCceEEEeeccCCccCCC---CCCCCEEEeCC
Confidence 468999999999999988876 22234455544321 0 0001111 234 44446 987754 56899999964
Q ss_pred ccchhccCCCchHH--HHHHHHHHHHhccCCc-EEEEEEcC
Q 028385 82 TLDSLMCGTNAPIS--ASQMLGEVSRLLKPGG-IYMLITYG 119 (210)
Q Consensus 82 ~l~~~~~~~~~~~~--~~~~l~~i~r~LkpgG-~~~~~~~~ 119 (210)
.=. .+....+. ...++.-+.++|+||| .|++=.|.
T Consensus 148 APn---SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 148 GES---SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CCC---CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCC---CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 321 22111111 1126777779999999 88876665
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.94 E-value=7.7e-05 Score=64.25 Aligned_cols=110 Identities=11% Similarity=0.093 Sum_probs=73.6
Q ss_pred CCCEEEeCCCCchhHHHHHHc----C----------CCcEEEEeCCHHHHHHHHHhh--cCCCCcEEEEcccCCCC---C
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD----G----------YEDIVNIDISSVAIDMMKMKY--EEIPQLKYLQMDVRDMS---F 68 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~----~----------~~~v~~vD~s~~~~~~a~~~~--~~~~~v~~~~~d~~~~~---~ 68 (210)
..+|+|.+||+|.+.....+. . ...++|+|+++.+...|+.+. ......++..+|....+ .
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~~ 297 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLREM 297 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGGC
T ss_pred CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhhh
Confidence 358999999999998776542 1 135999999999999998765 23334466777776544 1
Q ss_pred CCCCcccEEEECCccchhc-------c--CCCchHHHHHHHHHHHHhcc-------CCcEEEEEE
Q 028385 69 FEDESFDAVIDKGTLDSLM-------C--GTNAPISASQMLGEVSRLLK-------PGGIYMLIT 117 (210)
Q Consensus 69 ~~~~~fD~Vi~~~~l~~~~-------~--~~~~~~~~~~~l~~i~r~Lk-------pgG~~~~~~ 117 (210)
.....||+|+++..+..-. + ...........++.+.+.|| +||++.++.
T Consensus 298 ~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 298 GDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp CGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred cccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 2345799999997763110 0 00111223456788888887 699987775
No 296
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.91 E-value=1.8e-06 Score=86.07 Aligned_cols=104 Identities=17% Similarity=0.126 Sum_probs=54.6
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-C-----CCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEEC
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-G-----YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDK 80 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~-----~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~ 80 (210)
..++|||||.|+|..+..+.+. + ..+++..|+|+.+.+.++++++.. ++.....|..+...+...+||+|++.
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~-di~~~~~d~~~~~~~~~~~ydlvia~ 1318 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL-HVTQGQWDPANPAPGSLGKADLLVCN 1318 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH-TEEEECCCSSCCCC-----CCEEEEE
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc-ccccccccccccccCCCCceeEEEEc
Confidence 3568999999999877665543 1 347999999998888877776321 22222234333211455689999999
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
.++|.. .+....+++++++|||||.+++.+.
T Consensus 1319 ~vl~~t-------~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1319 CALATL-------GDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp CC---------------------------CCEEEEEEC
T ss_pred cccccc-------ccHHHHHHHHHHhcCCCcEEEEEec
Confidence 999987 7889999999999999999988763
No 297
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.81 E-value=3e-05 Score=61.10 Aligned_cols=105 Identities=11% Similarity=0.048 Sum_probs=65.9
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHH--HHHhhcCCCCcEEEEc-ccCCCCCCCCCcccEEEECCcc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDM--MKMKYEEIPQLKYLQM-DVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~--a~~~~~~~~~v~~~~~-d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
..+|||+||++|.++...+.. +...|+|+|+-..--+. ..+.+ ..+.|.|..+ |+..++ ...+|+|+|.-.
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql-~w~lV~~~~~~Dv~~l~---~~~~D~ivcDig- 169 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSY-GWNIVTMKSGVDVFYRP---SECCDTLLCDIG- 169 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBT-TGGGEEEECSCCTTSSC---CCCCSEEEECCC-
T ss_pred CCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhc-CCcceEEEeccCHhhCC---CCCCCEEEEECc-
Confidence 348999999999999977665 66679999987541000 00000 1133777877 887766 267999998643
Q ss_pred chhccCCCchHHH---HHHHHHHHHhccCC-cEEEEEEcCC
Q 028385 84 DSLMCGTNAPISA---SQMLGEVSRLLKPG-GIYMLITYGD 120 (210)
Q Consensus 84 ~~~~~~~~~~~~~---~~~l~~i~r~Lkpg-G~~~~~~~~~ 120 (210)
+. .+ .+.-+. .++|+-+.++|++| |.|++--+..
T Consensus 170 eS--s~-~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 170 ES--SS-SAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp CC--CS-CHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred cC--CC-ChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 21 11 111122 23677778999999 8887644443
No 298
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.75 E-value=0.00019 Score=54.86 Aligned_cols=104 Identities=10% Similarity=-0.050 Sum_probs=66.3
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHH-hhcCCCCcEEEEc-ccCCCCCCCCCcccEEEECCccc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKM-KYEEIPQLKYLQM-DVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~-~~~~~~~v~~~~~-d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
..+|||+||++|.++...+.. +..+|+++|+-..--+.-+- .....+.++|..+ |+..++ ..++|.|+|.-.=
T Consensus 79 g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~---~~~~DtllcDIge- 154 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLP---PEKCDTLLCDIGE- 154 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCC---CCCCSEEEECCCC-
T ss_pred CCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecC---CccccEEEEecCC-
Confidence 348999999999999977765 66689999986531100000 0012267899999 987665 3679999985321
Q ss_pred hhccCCCchHHH---HHHHHHHHHhccCCcEEEEEEcC
Q 028385 85 SLMCGTNAPISA---SQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 85 ~~~~~~~~~~~~---~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
..+ .+..+. .++|+-+.++|++ |.|++--+.
T Consensus 155 --Ss~-~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~ 188 (267)
T 3p8z_A 155 --SSP-SPTVEESRTIRVLKMVEPWLKN-NQFCIKVLN 188 (267)
T ss_dssp --CCS-CHHHHHHHHHHHHHHHGGGCSS-CEEEEEESC
T ss_pred --CCC-ChhhhhhHHHHHHHHHHHhccc-CCEEEEEcc
Confidence 111 111122 2367777899998 777664443
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.69 E-value=4.5e-05 Score=60.81 Aligned_cols=43 Identities=7% Similarity=0.007 Sum_probs=39.2
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE 51 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~ 51 (210)
...|||++||+|..+..+++.+. +++|+|+++.+++.|+++..
T Consensus 236 ~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 236 GDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHH
Confidence 35799999999999999988876 89999999999999999874
No 300
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.55 E-value=0.00026 Score=55.87 Aligned_cols=103 Identities=13% Similarity=0.053 Sum_probs=65.2
Q ss_pred CCCCCCCCCCEEEeCC------CCchhHHHHHHc-CC-CcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCC
Q 028385 1 MATPSTGTRDTCRRAA------PSIVMSEDMVKD-GY-EDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDE 72 (210)
Q Consensus 1 ~~~~~~~~~~vLdiGc------G~G~~~~~l~~~-~~-~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~ 72 (210)
||+|.. ++|||+|+ ..|.+. +.+. +. ..++++|+.+-. ...+ .++++|+.... ..+
T Consensus 105 ~~vp~g--mrVLDLGA~s~kg~APGS~V--Lr~~~p~g~~VVavDL~~~~---------sda~-~~IqGD~~~~~--~~~ 168 (344)
T 3r24_A 105 LAVPYN--MRVIHFGAGSDKGVAPGTAV--LRQWLPTGTLLVDSDLNDFV---------SDAD-STLIGDCATVH--TAN 168 (344)
T ss_dssp CCCCTT--CEEEEESCCCTTSBCHHHHH--HHHHSCTTCEEEEEESSCCB---------CSSS-EEEESCGGGEE--ESS
T ss_pred EeecCC--CEEEeCCCCCCCCCCCcHHH--HHHhCCCCcEEEEeeCcccc---------cCCC-eEEEccccccc--cCC
Confidence 466643 58999997 456632 2222 22 379999997632 1122 55999987654 357
Q ss_pred cccEEEECCccchhccCC------CchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 73 SFDAVIDKGTLDSLMCGT------NAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 73 ~fD~Vi~~~~l~~~~~~~------~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
+||+|++...=. .+|. +...-.+.++.=+.+.|+|||.|++=.+..+
T Consensus 169 k~DLVISDMAPN--tTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGs 221 (344)
T 3r24_A 169 KWDLIISDMYDP--RTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS 221 (344)
T ss_dssp CEEEEEECCCCT--TSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS
T ss_pred CCCEEEecCCCC--cCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCC
Confidence 899999953211 1111 1223467777778889999999988766543
No 301
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.53 E-value=0.0002 Score=58.37 Aligned_cols=58 Identities=14% Similarity=0.045 Sum_probs=49.5
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCC
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM 66 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~ 66 (210)
...|||||+|.|.++..+++. ...+|+++|+++.++...++.. ..++++++.+|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-EGSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-TTSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-cCCCEEEEECCccch
Confidence 357999999999999999986 3348999999999999998876 447899999999653
No 302
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.47 E-value=0.00017 Score=56.83 Aligned_cols=101 Identities=6% Similarity=-0.003 Sum_probs=75.9
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCC-CC--CCCCCcccEEEECCccc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD-MS--FFEDESFDAVIDKGTLD 84 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~-~~--~~~~~~fD~Vi~~~~l~ 84 (210)
...+||+=+|||.++..+++.+ .+++.+|.++..++..+++.+...+++++..|... +. .-+...||+|+....++
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~-d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPYe 170 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQ-DRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYE 170 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTT-SEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCCC
T ss_pred CCCceeEeCCcHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCCC
Confidence 3568999999999999998854 69999999999999999988766789999999654 21 02345799999876654
Q ss_pred hhccCCCchHHHHHHHHHHHH--hccCCcEEEEE
Q 028385 85 SLMCGTNAPISASQMLGEVSR--LLKPGGIYMLI 116 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r--~LkpgG~~~~~ 116 (210)
.- ....++++.+.+ .+.++|.+++.
T Consensus 171 ~k-------~~~~~vl~~L~~~~~r~~~Gi~v~W 197 (283)
T 2oo3_A 171 RK-------EEYKEIPYAIKNAYSKFSTGLYCVW 197 (283)
T ss_dssp ST-------THHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CC-------cHHHHHHHHHHHhCccCCCeEEEEE
Confidence 22 345555555554 34689998664
No 303
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.44 E-value=0.00089 Score=54.25 Aligned_cols=108 Identities=12% Similarity=0.102 Sum_probs=81.1
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCC-----------------------CCcEEEEcc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEI-----------------------PQLKYLQMD 62 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-----------------------~~v~~~~~d 62 (210)
+...|+.+|||.......+... +...++-+|. |++++.-++.+.+. ++..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 3457999999999999888764 3336677776 77777766654321 578899999
Q ss_pred cCCCC-------CC-CCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 63 VRDMS-------FF-EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 63 ~~~~~-------~~-~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
+.+.. .. ..+...++++-+++.++ +.+...++++.+.+.. |+|.+++.+...|
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL-----~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~ 236 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYM-----HNNESQLLINTIMSKF-SHGLWISYDPIGG 236 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGS-----CHHHHHHHHHHHHHHC-SSEEEEEEEECCC
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCC-----CHHHHHHHHHHHHhhC-CCcEEEEEeccCC
Confidence 98842 11 23567899999999998 7789999999999887 7888877776555
No 304
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.38 E-value=0.0012 Score=54.37 Aligned_cols=73 Identities=16% Similarity=0.238 Sum_probs=60.3
Q ss_pred CCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC--CC-----CCCcccEEEECC
Q 028385 9 RDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS--FF-----EDESFDAVIDKG 81 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~--~~-----~~~~fD~Vi~~~ 81 (210)
++++|+-||.|.++..+.+.|...+.++|+++.+++..+.+. ++..++++|+.++. .+ ....+|+|+...
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~---~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggp 79 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF---PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGP 79 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC---TTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC---CCCceEecChhhcCHHHHHhhcccCCCeeEEEecC
Confidence 689999999999999998888867889999999999888876 56788899998864 01 346799999876
Q ss_pred ccc
Q 028385 82 TLD 84 (210)
Q Consensus 82 ~l~ 84 (210)
...
T Consensus 80 PCQ 82 (376)
T 3g7u_A 80 PCQ 82 (376)
T ss_dssp CCC
T ss_pred CCC
Confidence 643
No 305
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.38 E-value=0.0016 Score=52.57 Aligned_cols=76 Identities=12% Similarity=0.007 Sum_probs=59.0
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
....+++|+.||.|.++..+.+.|...+.++|+++.+++..+.+..... .+|+.++..-.-..+|+|+.......
T Consensus 9 ~~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~-----~~Di~~~~~~~~~~~D~l~~gpPCQ~ 83 (327)
T 2c7p_A 9 LTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKP-----EGDITQVNEKTIPDHDILCAGFPCQA 83 (327)
T ss_dssp TTTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCC-----BSCGGGSCGGGSCCCSEEEEECCCTT
T ss_pred cCCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCC-----cCCHHHcCHhhCCCCCEEEECCCCCC
Confidence 3457899999999999999999888789999999999999998885432 67887754111125899998766654
Q ss_pred h
Q 028385 86 L 86 (210)
Q Consensus 86 ~ 86 (210)
+
T Consensus 84 f 84 (327)
T 2c7p_A 84 F 84 (327)
T ss_dssp T
T ss_pred c
Confidence 4
No 306
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.29 E-value=0.00038 Score=56.67 Aligned_cols=76 Identities=16% Similarity=0.245 Sum_probs=57.9
Q ss_pred CCCEEEeCCCCchhHHHHHHcC--CCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC--CCCCCcccEEEECCcc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDG--YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS--FFEDESFDAVIDKGTL 83 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~--~~~~~~fD~Vi~~~~l 83 (210)
..+|+|+-||.|.++..+.+.| ...+.++|+++.+++..+.+. ++..++++|+.++. .++...+|+|+.....
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~---~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPC 78 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNF---PHTQLLAKTIEGITLEEFDRLSFDMILMSPPC 78 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC---TTSCEECSCGGGCCHHHHHHHCCSEEEECCC-
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhc---cccccccCCHHHccHhHcCcCCcCEEEEcCCC
Confidence 4679999999999999998887 447999999999999999887 44567889998864 0111258999987765
Q ss_pred chh
Q 028385 84 DSL 86 (210)
Q Consensus 84 ~~~ 86 (210)
..+
T Consensus 79 q~f 81 (343)
T 1g55_A 79 QPF 81 (343)
T ss_dssp ---
T ss_pred cch
Confidence 433
No 307
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.11 E-value=0.0068 Score=48.52 Aligned_cols=105 Identities=14% Similarity=0.100 Sum_probs=77.9
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc-----CCCCcEEEEcccCCCC--------CCCCCcc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE-----EIPQLKYLQMDVRDMS--------FFEDESF 74 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-----~~~~v~~~~~d~~~~~--------~~~~~~f 74 (210)
...|+++|||-=.....+.......++-+| .|.+++..++.+. ...+..++.+|+.+ . .+..+.-
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSAR 180 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSC
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCC
Confidence 346999999987775555421224788999 5999998888775 23678899999987 3 1333445
Q ss_pred cEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 75 DAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 75 D~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
=++++-++++++ +.+....+++.+...+.||+.+++-...
T Consensus 181 t~~i~Egvl~Yl-----~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 181 TAWLAEGLLMYL-----PATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp EEEEECSCGGGS-----CHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred EEEEEechHhhC-----CHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 578888999998 6788899999999998899888655443
No 308
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.80 E-value=0.0044 Score=49.42 Aligned_cols=127 Identities=14% Similarity=0.089 Sum_probs=71.9
Q ss_pred CCCEEEeCCCCchhHHHHHH-----cCCC--cEEEEeCCH------------HHHHHHHHhhcC--CC--CcEEEEcccC
Q 028385 8 TRDTCRRAAPSIVMSEDMVK-----DGYE--DIVNIDISS------------VAIDMMKMKYEE--IP--QLKYLQMDVR 64 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~-----~~~~--~v~~vD~s~------------~~~~~a~~~~~~--~~--~v~~~~~d~~ 64 (210)
..+|||+|=|+|.+.....+ .+.. +++.+|..+ ...+........ .. .+++..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 35799999999987644332 2222 456666421 122222222211 12 3467788887
Q ss_pred C-CCCCCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCchhhHhhhcccccceEEEEEEec
Q 028385 65 D-MSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKARMIHLKWKVYNWKIELYIIA 143 (210)
Q Consensus 65 ~-~~~~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~p 143 (210)
. ++.+.+..||+|+..+ +.....+.-=-..+++.++++++|||.+ ++|+........+. ..++.+ ..+|
T Consensus 177 ~~l~~l~~~~~Da~flDg----FsP~kNPeLWs~e~f~~l~~~~~pgg~l--aTYtaag~VRR~L~--~aGF~V--~k~~ 246 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDA----FSPYKNPELWTLDFLSLIKERIDEKGYW--VSYSSSLSVRKSLL--TLGFKV--GSSR 246 (308)
T ss_dssp HHGGGCCSCCEEEEEECC----SCTTTSGGGGSHHHHHHHHTTEEEEEEE--EESCCCHHHHHHHH--HTTCEE--EEEE
T ss_pred HHHhhhcccceeEEEeCC----CCcccCcccCCHHHHHHHHHHhCCCcEE--EEEeCcHHHHHHHH--HCCCEE--EecC
Confidence 6 4435556899998532 2222222222368999999999999988 46776555544442 344554 3444
Q ss_pred C
Q 028385 144 R 144 (210)
Q Consensus 144 ~ 144 (210)
-
T Consensus 247 G 247 (308)
T 3vyw_A 247 E 247 (308)
T ss_dssp C
T ss_pred C
Confidence 3
No 309
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.78 E-value=0.013 Score=46.56 Aligned_cols=82 Identities=12% Similarity=0.035 Sum_probs=62.6
Q ss_pred CCCCCCCCEEEeCCCCchhHHHHHHcCCCc--EEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC--CCC-CCcccEE
Q 028385 3 TPSTGTRDTCRRAAPSIVMSEDMVKDGYED--IVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS--FFE-DESFDAV 77 (210)
Q Consensus 3 ~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~--v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~--~~~-~~~fD~V 77 (210)
+......+++|+-||.|.++..+.+.|... +.++|+++.+++.-+.+. ++..+..+|+.++. .++ ...+|++
T Consensus 11 ~~~~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~---~~~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 11 AEKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH---QGKIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp CCCCCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT---TTCEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred cccCCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC---CCCceeCCChHHccHHHhcccCCcCEE
Confidence 444556789999999999999998888754 699999999988877776 45567889998864 011 1369999
Q ss_pred EECCccchhc
Q 028385 78 IDKGTLDSLM 87 (210)
Q Consensus 78 i~~~~l~~~~ 87 (210)
+.......++
T Consensus 88 ~ggpPCQ~fS 97 (295)
T 2qrv_A 88 IGGSPCNDLS 97 (295)
T ss_dssp EECCCCGGGB
T ss_pred EecCCCcccc
Confidence 9987665543
No 310
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.46 E-value=0.0026 Score=50.56 Aligned_cols=64 Identities=22% Similarity=0.270 Sum_probs=43.3
Q ss_pred CCcEEEEcccCC-CCCCCCCcccEEEECCccchhc-cCCC------------chHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 54 PQLKYLQMDVRD-MSFFEDESFDAVIDKGTLDSLM-CGTN------------APISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 54 ~~v~~~~~d~~~-~~~~~~~~fD~Vi~~~~l~~~~-~~~~------------~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.++.++++|+.+ +..+++++||+|+++..+.... +... .......+++++.++|||||.+++..
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 456899999987 3335678999999987764210 1000 01224567889999999999987653
No 311
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.45 E-value=0.023 Score=45.47 Aligned_cols=98 Identities=13% Similarity=0.025 Sum_probs=69.2
Q ss_pred CCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchhcc
Q 028385 9 RDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLMC 88 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~~~ 88 (210)
++|+|+=||-|.++.-+.+.|+.-+.++|+++.+.+.-+.+.. -.++.+|+.++..-.-...|+++.......++.
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~----~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ 76 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS----AKLIKGDISKISSDEFPKCDGIIGGPPSQSWSE 76 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC----SEEEESCGGGCCGGGSCCCSEEECCCCGGGTEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC----CCcccCChhhCCHhhCCcccEEEecCCCCCcCC
Confidence 5799999999999999988888778899999999988887763 367889998875111235899988766554431
Q ss_pred -C-----CCchHHHHHHHHHHHHhccCC
Q 028385 89 -G-----TNAPISASQMLGEVSRLLKPG 110 (210)
Q Consensus 89 -~-----~~~~~~~~~~l~~i~r~Lkpg 110 (210)
+ .+++..+...+-++.+.++|.
T Consensus 77 ag~~~g~~d~R~~L~~~~~r~i~~~~Pk 104 (331)
T 3ubt_Y 77 GGSLRGIDDPRGKLFYEYIRILKQKKPI 104 (331)
T ss_dssp TTEECCTTCGGGHHHHHHHHHHHHHCCS
T ss_pred CCCccCCCCchhHHHHHHHHHHhccCCe
Confidence 1 133334444444555566885
No 312
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.44 E-value=0.013 Score=45.59 Aligned_cols=105 Identities=11% Similarity=0.033 Sum_probs=71.7
Q ss_pred CCCEEEeCCCCchhHHHHHHc--------CCCcEEEEeCCHHH---------------------------HHHHH---Hh
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD--------GYEDIVNIDISSVA---------------------------IDMMK---MK 49 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~--------~~~~v~~vD~s~~~---------------------------~~~a~---~~ 49 (210)
++.|+|+|+-.|..+..++.. ...+++++|.-+.+ ++... ++
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 568999999999888776541 23579999921111 22111 11
Q ss_pred ---hcCC-CCcEEEEcccCCC-CC----CCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 50 ---YEEI-PQLKYLQMDVRDM-SF----FEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 50 ---~~~~-~~v~~~~~d~~~~-~~----~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
+... ++++++.+++.+. +. .+..+||+|....-. . ......++.+...|+|||++++-++..
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y-------~~t~~~le~~~p~l~~GGvIv~DD~~~ 220 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--Y-------EPTKAVLEAIRPYLTKGSIVAFDELDN 220 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--H-------HHHHHHHHHHGGGEEEEEEEEESSTTC
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--c-------chHHHHHHHHHHHhCCCcEEEEcCCCC
Confidence 1222 6799999998873 31 345679999976532 2 567788999999999999999888754
Q ss_pred c
Q 028385 121 P 121 (210)
Q Consensus 121 p 121 (210)
+
T Consensus 221 ~ 221 (257)
T 3tos_A 221 P 221 (257)
T ss_dssp T
T ss_pred C
Confidence 3
No 313
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.30 E-value=0.015 Score=47.46 Aligned_cols=94 Identities=13% Similarity=0.093 Sum_probs=61.8
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCC----CCCCCCcccEEEECC
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM----SFFEDESFDAVIDKG 81 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~----~~~~~~~fD~Vi~~~ 81 (210)
..+||-+|+|. |..+..+++. +..+|+++|.++..++.+++.-.. .++..+-.+. ....++.+|+|+...
T Consensus 191 g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~----~vi~~~~~~~~~~~~~~~~gg~D~vid~~ 266 (371)
T 1f8f_A 191 ASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGAT----HVINSKTQDPVAAIKEITDGGVNFALEST 266 (371)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCS----EEEETTTSCHHHHHHHHTTSCEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCC----EEecCCccCHHHHHHHhcCCCCcEEEECC
Confidence 35799999876 7777777775 554699999999999988765321 1222211111 001123799999743
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
. ....++...++|+++|+++++..
T Consensus 267 g-------------~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 267 G-------------SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp C-------------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred C-------------CHHHHHHHHHHHhcCCEEEEeCC
Confidence 2 12457888999999999977643
No 314
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=96.25 E-value=0.017 Score=47.64 Aligned_cols=74 Identities=12% Similarity=0.141 Sum_probs=50.0
Q ss_pred CCCEEEeCCCCchhHHHHHHc--------CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD--------GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~ 79 (210)
...|+|+|+|+|.+...+++. ...+++.||+|+...+.-+++.....++.|.. ++.++| ++ .-+|++
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~v~W~~-~l~~lp---~~-~~~viA 155 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIRNIHWHD-SFEDVP---EG-PAVILA 155 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCSSEEEES-SGGGSC---CS-SEEEEE
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCCCCeEEeC-ChhhcC---CC-CeEEEe
Confidence 457999999999999888752 12379999999998887777665433566552 233333 22 346666
Q ss_pred CCccchh
Q 028385 80 KGTLDSL 86 (210)
Q Consensus 80 ~~~l~~~ 86 (210)
+.+|+++
T Consensus 156 NE~fDAl 162 (387)
T 1zkd_A 156 NEYFDVL 162 (387)
T ss_dssp ESSGGGS
T ss_pred ccccccC
Confidence 6666654
No 315
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.24 E-value=0.02 Score=46.17 Aligned_cols=74 Identities=8% Similarity=0.060 Sum_probs=56.7
Q ss_pred CCCEEEeCCCCchhHHHHHHcCC--CcE-EEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC--CCCCCcccEEEECCc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGY--EDI-VNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS--FFEDESFDAVIDKGT 82 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~--~~v-~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~--~~~~~~fD~Vi~~~~ 82 (210)
..+++|+-||.|.++..+.+.|. ..+ .++|+++.+.+.-+.+... . +.++|+.++. .++...+|+++....
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~---~-~~~~DI~~~~~~~i~~~~~Dil~ggpP 85 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE---E-VQVKNLDSISIKQIESLNCNTWFMSPP 85 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC---C-CBCCCTTTCCHHHHHHTCCCEEEECCC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC---C-cccCChhhcCHHHhccCCCCEEEecCC
Confidence 46899999999999999988874 456 7999999999998888743 2 5678888764 122236899998766
Q ss_pred cch
Q 028385 83 LDS 85 (210)
Q Consensus 83 l~~ 85 (210)
...
T Consensus 86 CQ~ 88 (327)
T 3qv2_A 86 CQP 88 (327)
T ss_dssp CTT
T ss_pred ccC
Confidence 443
No 316
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.00 E-value=0.038 Score=44.62 Aligned_cols=95 Identities=15% Similarity=0.161 Sum_probs=62.5
Q ss_pred CCCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-----CCCCCcccEEEE
Q 028385 7 GTRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-----FFEDESFDAVID 79 (210)
Q Consensus 7 ~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-----~~~~~~fD~Vi~ 79 (210)
...+||-+|+|. |.++..+++. +..+|+++|.++.-++.+++.-.. .++..+-.+.. ......+|+|+.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~----~vi~~~~~~~~~~v~~~t~g~g~D~v~d 241 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGAT----DIINYKNGDIVEQILKATDGKGVDKVVI 241 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCC----EEECGGGSCHHHHHHHHTTTCCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCc----eEEcCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 345789999876 7777777776 554899999999988888775321 22221111110 022346999997
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
...- ...++...+.|++||+++.+..
T Consensus 242 ~~g~-------------~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 242 AGGD-------------VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp CSSC-------------TTHHHHHHHHEEEEEEEEECCC
T ss_pred CCCC-------------hHHHHHHHHHHhcCCEEEEecc
Confidence 4321 1347778899999999977654
No 317
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.90 E-value=0.0091 Score=48.26 Aligned_cols=75 Identities=15% Similarity=0.236 Sum_probs=57.9
Q ss_pred CCEEEeCCCCchhHHHHHHcCC--CcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC--CCCCCcccEEEECCccc
Q 028385 9 RDTCRRAAPSIVMSEDMVKDGY--EDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS--FFEDESFDAVIDKGTLD 84 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~--~~~~~~fD~Vi~~~~l~ 84 (210)
.+++|+-||.|.++..+.+.|. ..+.++|+++.+.+.-+.+. ++..+...|+.++. .++...+|+++....-.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~---~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ 80 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNF---PETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQ 80 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC---TTSCEECCCGGGCCHHHHHHTTCCEEEECCCCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhC---CCCceeccccccCCHHHhccCCCCEEEecCCCc
Confidence 5799999999999999988775 46899999999999888887 44567788888764 12233689999876544
Q ss_pred hh
Q 028385 85 SL 86 (210)
Q Consensus 85 ~~ 86 (210)
.+
T Consensus 81 ~f 82 (333)
T 4h0n_A 81 PF 82 (333)
T ss_dssp CS
T ss_pred ch
Confidence 33
No 318
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.79 E-value=0.038 Score=46.86 Aligned_cols=76 Identities=12% Similarity=0.023 Sum_probs=59.0
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCC-----------------
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFE----------------- 70 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~----------------- 70 (210)
..+++|+-||.|.++.-+.+.|...+.++|+++.+.+.-+.+....++..++++|+.++. ..
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~-~~~~~~~~~~~~~~~i~~~ 166 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDIT-LSHQEGVSDEAAAEHIRQH 166 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHH-CTTCTTSCHHHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhh-hccccccchhhHHhhhhhc
Confidence 468999999999999999888876699999999999988888754456677888887653 11
Q ss_pred CCcccEEEECCccc
Q 028385 71 DESFDAVIDKGTLD 84 (210)
Q Consensus 71 ~~~fD~Vi~~~~l~ 84 (210)
-..+|+++......
T Consensus 167 ~~~~Dvl~gGpPCQ 180 (482)
T 3me5_A 167 IPEHDVLLAGFPCQ 180 (482)
T ss_dssp SCCCSEEEEECCCC
T ss_pred CCCCCEEEecCCCc
Confidence 13589999866544
No 319
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.70 E-value=0.05 Score=44.79 Aligned_cols=103 Identities=9% Similarity=0.070 Sum_probs=62.0
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCC-C----C-CCCCcccEEEE
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM-S----F-FEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~-~----~-~~~~~fD~Vi~ 79 (210)
..+||-+|+|. |.++..+++. +..+|+++|.++..++.+++.- .+++..+-.+. . . .....+|+|+.
T Consensus 186 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG-----a~~i~~~~~~~~~~~~~~~~~g~g~Dvvid 260 (398)
T 2dph_A 186 GSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAG-----FETIDLRNSAPLRDQIDQILGKPEVDCGVD 260 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTT-----CEEEETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC-----CcEEcCCCcchHHHHHHHHhCCCCCCEEEE
Confidence 35799999976 7788888775 5558999999999888886532 22232211111 0 0 11236999997
Q ss_pred CCccchhccCCCc---hHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 80 KGTLDSLMCGTNA---PISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 80 ~~~l~~~~~~~~~---~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.-.-... +... .......+++..++|++||+++++.
T Consensus 261 ~~g~~~~--~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 261 AVGFEAH--GLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp CSCTTCB--CSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CCCCccc--cccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 5332100 0000 0001235788889999999987654
No 320
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.66 E-value=0.097 Score=42.37 Aligned_cols=95 Identities=14% Similarity=0.090 Sum_probs=62.3
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcc------cCC-C-CCCCCCcccEE
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMD------VRD-M-SFFEDESFDAV 77 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d------~~~-~-~~~~~~~fD~V 77 (210)
..+||-+|+|. |.++..+++. |...|+++|.++.-.+.+++. . +.+.....+ +.+ + .......+|+|
T Consensus 180 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~--~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv 256 (363)
T 3m6i_A 180 GDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C--PEVVTHKVERLSAEESAKKIVESFGGIEPAVA 256 (363)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C--TTCEEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c--hhcccccccccchHHHHHHHHHHhCCCCCCEE
Confidence 35788899865 7777777776 554599999999999999876 3 222222211 111 0 00234579999
Q ss_pred EECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 78 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 78 i~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
+..-. -...+....++|++||+++++..
T Consensus 257 id~~g-------------~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 257 LECTG-------------VESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp EECSC-------------CHHHHHHHHHHSCTTCEEEECCC
T ss_pred EECCC-------------ChHHHHHHHHHhcCCCEEEEEcc
Confidence 97432 12357778899999999987654
No 321
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.34 E-value=0.044 Score=44.22 Aligned_cols=90 Identities=11% Similarity=0.030 Sum_probs=60.9
Q ss_pred CCCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 7 GTRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
...+||-+|+|. |..+..+++. +. +|+++|.++.-.+.+++.-. . .++ .+...+. . .+|+|+....-.
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa--~--~v~-~~~~~~~---~-~~D~vid~~g~~ 245 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGV--K--HFY-TDPKQCK---E-ELDFIISTIPTH 245 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTC--S--EEE-SSGGGCC---S-CEEEEEECCCSC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCC--C--eec-CCHHHHh---c-CCCEEEECCCcH
Confidence 345788899875 7777777775 55 89999999988888876421 1 222 3333222 2 799999743322
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
..++...++|+++|+++++...
T Consensus 246 -------------~~~~~~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 246 -------------YDLKDYLKLLTYNGDLALVGLP 267 (348)
T ss_dssp -------------CCHHHHHTTEEEEEEEEECCCC
T ss_pred -------------HHHHHHHHHHhcCCEEEEECCC
Confidence 1366788899999999876543
No 322
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.33 E-value=0.075 Score=43.32 Aligned_cols=94 Identities=11% Similarity=0.127 Sum_probs=61.0
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCC----CC---CCCCcccEEE
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM----SF---FEDESFDAVI 78 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~----~~---~~~~~fD~Vi 78 (210)
..+||-+|+|. |.++..+++. |..+|+++|.++.-.+.+++.-.. .++...-.+. .. ...+.+|+|+
T Consensus 183 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~----~vi~~~~~~~~~~i~~~~~~~~gg~Dvvi 258 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGAT----ATVDPSAGDVVEAIAGPVGLVPGGVDVVI 258 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS----EEECTTSSCHHHHHHSTTSSSTTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC----EEECCCCcCHHHHHHhhhhccCCCCCEEE
Confidence 34788899865 6777777775 555899999999999888775321 1121111110 00 2234799999
Q ss_pred ECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 79 DKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
.... ....++...++|++||.++++..
T Consensus 259 d~~G-------------~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 259 ECAG-------------VAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp ECSC-------------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred ECCC-------------CHHHHHHHHHHhccCCEEEEEec
Confidence 7422 12457788899999999977643
No 323
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.26 E-value=0.069 Score=43.22 Aligned_cols=94 Identities=14% Similarity=0.073 Sum_probs=60.3
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcc---cCC----CCCCCCCcccEEE
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMD---VRD----MSFFEDESFDAVI 78 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d---~~~----~~~~~~~~fD~Vi 78 (210)
..+||-+|+|. |.++..+++. +..+|+++|.++.-++.+++.-. . .++..+ ..+ +.....+.+|+|+
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa--~--~vi~~~~~~~~~~~~~i~~~~~~g~D~vi 247 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA--D--LVLQISKESPQEIARKVEGQLGCKPEVTI 247 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC--S--EEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC--C--EEEcCcccccchHHHHHHHHhCCCCCEEE
Confidence 35799999875 7777777775 55489999999998888875432 1 222211 011 1001115699999
Q ss_pred ECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 79 DKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
..-.- ...+....++|++||+++.+..
T Consensus 248 d~~g~-------------~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 248 ECTGA-------------EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp ECSCC-------------HHHHHHHHHHSCTTCEEEECSC
T ss_pred ECCCC-------------hHHHHHHHHHhcCCCEEEEEec
Confidence 74321 2346778899999999977643
No 324
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.23 E-value=0.018 Score=46.32 Aligned_cols=64 Identities=17% Similarity=0.130 Sum_probs=44.2
Q ss_pred CCcEEEEcccCC-CCCCCCCcccEEEECCccchhc---cCCC----chHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 54 PQLKYLQMDVRD-MSFFEDESFDAVIDKGTLDSLM---CGTN----APISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 54 ~~v~~~~~d~~~-~~~~~~~~fD~Vi~~~~l~~~~---~~~~----~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.+..++++|..+ +..+++++||+|++...+.... ++.. -.......+.+++++|||||.+++..
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE
Confidence 457889999875 3336688999999986653210 0000 01356788999999999999987753
No 325
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.92 E-value=0.12 Score=42.37 Aligned_cols=105 Identities=9% Similarity=0.109 Sum_probs=62.5
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCC-CC----C-CCCCcccEEEE
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD-MS----F-FEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~-~~----~-~~~~~fD~Vi~ 79 (210)
..+||-+|+|. |.++..+++. |...|+++|.++.-++.+++.- .+.+...-.+ +. . .....+|+|+.
T Consensus 186 g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lG-----a~~i~~~~~~~~~~~v~~~t~g~g~Dvvid 260 (398)
T 1kol_A 186 GSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG-----FEIADLSLDTPLHEQIAALLGEPEVDCAVD 260 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT-----CEEEETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcC-----CcEEccCCcchHHHHHHHHhCCCCCCEEEE
Confidence 34789999876 7777778775 5557999999999999887542 1222211111 00 0 12246999998
Q ss_pred CCccchhccCC--CchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 80 KGTLDSLMCGT--NAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 80 ~~~l~~~~~~~--~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.-.-....-.. ....+....++...++|++||+++++.
T Consensus 261 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 261 AVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp CCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 54321000000 000122346788899999999997654
No 326
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.86 E-value=0.086 Score=42.30 Aligned_cols=93 Identities=11% Similarity=0.149 Sum_probs=60.7
Q ss_pred CCCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-CC--CCCcccEEEECC
Q 028385 7 GTRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-FF--EDESFDAVIDKG 81 (210)
Q Consensus 7 ~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-~~--~~~~fD~Vi~~~ 81 (210)
...+||-.|+|. |..+..+++. +. +|+++|.+++-.+.+++.-.. .++..+-.+.. .. ..+.+|+|+...
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~----~~i~~~~~~~~~~~~~~~g~~d~vid~~ 240 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAE----VAVNARDTDPAAWLQKEIGGAHGVLVTA 240 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCS----EEEETTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCC----EEEeCCCcCHHHHHHHhCCCCCEEEEeC
Confidence 345788899976 8888888876 55 899999999999988764321 12211111110 00 113689998642
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
. ....++...++|+++|+++++.
T Consensus 241 g-------------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 241 V-------------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp C-------------CHHHHHHHHHHEEEEEEEEECS
T ss_pred C-------------CHHHHHHHHHHhccCCEEEEeC
Confidence 2 1345778889999999997764
No 327
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.80 E-value=0.043 Score=45.51 Aligned_cols=60 Identities=7% Similarity=0.138 Sum_probs=46.6
Q ss_pred CCCCCEEEeCCCCchhHHHHH-Hc-C-CCcEEEEeCCHHHHHHHHHhhcC-----C-CCcEEEEcccCC
Q 028385 6 TGTRDTCRRAAPSIVMSEDMV-KD-G-YEDIVNIDISSVAIDMMKMKYEE-----I-PQLKYLQMDVRD 65 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~-~~-~-~~~v~~vD~s~~~~~~a~~~~~~-----~-~~v~~~~~d~~~ 65 (210)
.....++|+||+.|..+..++ +. + ..+|+++|.+|...+..+++.+. . ++++++..-+.+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGE 293 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECS
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEEC
Confidence 344579999999999999887 43 3 35899999999999999988754 3 567777665544
No 328
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.79 E-value=0.62 Score=32.05 Aligned_cols=94 Identities=10% Similarity=-0.003 Sum_probs=58.0
Q ss_pred CCCEEEeCCCC-ch-hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC---CCCCCcccEEEECCc
Q 028385 8 TRDTCRRAAPS-IV-MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS---FFEDESFDAVIDKGT 82 (210)
Q Consensus 8 ~~~vLdiGcG~-G~-~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~---~~~~~~fD~Vi~~~~ 82 (210)
..+|+=+|+|. |. ++..+.+.+. +|+++|.+++.++.+++ ..+.++.+|..+.. ...-...|+|+....
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~-----~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRE-----RGVRAVLGNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH-----TTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHH-----cCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence 45799999865 32 2233334465 89999999999888765 24678889987642 122357898886422
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
- ......+....+.+.|+..++...
T Consensus 81 ~----------~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 81 N----------GYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp C----------HHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred C----------hHHHHHHHHHHHHHCCCCeEEEEE
Confidence 1 111222334556667887765443
No 329
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.65 E-value=0.27 Score=39.55 Aligned_cols=93 Identities=16% Similarity=0.078 Sum_probs=59.1
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEccc-CCCC----C-CC---CCcccE
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDV-RDMS----F-FE---DESFDA 76 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~-~~~~----~-~~---~~~fD~ 76 (210)
..+||-+|+|. |..+..+++. +. +|+++|.++.-.+.+++.-. + .++..+- .+.. . .. .+.+|+
T Consensus 169 g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa--~--~~~~~~~~~~~~~~i~~~~~~~~g~g~D~ 243 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGA--D--VTLVVDPAKEEESSIIERIRSAIGDLPNV 243 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTC--S--EEEECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCC--C--EEEcCcccccHHHHHHHHhccccCCCCCE
Confidence 34789999865 6677777765 55 69999999999888875422 1 2222110 1110 0 11 246999
Q ss_pred EEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 77 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 77 Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
|+....- ...++...++|+++|+++.+..
T Consensus 244 vid~~g~-------------~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 244 TIDCSGN-------------EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp EEECSCC-------------HHHHHHHHHHSCTTCEEEECSC
T ss_pred EEECCCC-------------HHHHHHHHHHHhcCCEEEEEec
Confidence 9974321 2346778899999999977643
No 330
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.62 E-value=0.13 Score=41.87 Aligned_cols=95 Identities=13% Similarity=0.114 Sum_probs=61.1
Q ss_pred CCCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcc--cCCCC----CCCCCcccEEE
Q 028385 7 GTRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMD--VRDMS----FFEDESFDAVI 78 (210)
Q Consensus 7 ~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d--~~~~~----~~~~~~fD~Vi 78 (210)
...+||-+|+|. |.++..+++. +..+|+++|.++.-++.+++.-.. .++... -.++. ...++.+|+|+
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~----~vi~~~~~~~~~~~~i~~~~~gg~D~vi 268 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVN----EFVNPKDHDKPIQEVIVDLTDGGVDYSF 268 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCC----EEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc----EEEccccCchhHHHHHHHhcCCCCCEEE
Confidence 345799999864 6777777765 655899999999988888754211 122111 01110 01234799999
Q ss_pred ECCccchhccCCCchHHHHHHHHHHHHhccCC-cEEEEEEc
Q 028385 79 DKGTLDSLMCGTNAPISASQMLGEVSRLLKPG-GIYMLITY 118 (210)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~~~~l~~i~r~Lkpg-G~~~~~~~ 118 (210)
.... ....++...+.|++| |+++++..
T Consensus 269 d~~g-------------~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 269 ECIG-------------NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp ECSC-------------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred ECCC-------------CHHHHHHHHHHhhccCCEEEEEcc
Confidence 7422 134578888999997 99977654
No 331
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.58 E-value=0.03 Score=49.62 Aligned_cols=112 Identities=13% Similarity=0.168 Sum_probs=67.2
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-----------C--CCcEEEEeC---CHHHHHHHHHhh-----------cCC------
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-----------G--YEDIVNIDI---SSVAIDMMKMKY-----------EEI------ 53 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-----------~--~~~v~~vD~---s~~~~~~a~~~~-----------~~~------ 53 (210)
...+|+|+|-|+|.+...+.+. . ..+++.+|. +.+.+..+.+.. ...
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 3458999999999888776542 1 136899998 555555433211 111
Q ss_pred ----------CCcEEEEcccCC-CCCCC---CCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 54 ----------PQLKYLQMDVRD-MSFFE---DESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 54 ----------~~v~~~~~d~~~-~~~~~---~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
-.+++..+|+.+ ++.+. +..+|.++..+. .....+..=...++..+.++++|||.+ .+++
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f----~p~~np~~w~~~~~~~l~~~~~~g~~~--~t~~ 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGF----APAKNPDMWNEQLFNAMARMTRPGGTF--STFT 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSS----CC--CCTTCSHHHHHHHHHHEEEEEEE--EESC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCC----CCCCChhhhhHHHHHHHHHHhCCCCEE--Eecc
Confidence 135677778765 33232 468999986432 111111111367899999999999987 4555
Q ss_pred Cchhh
Q 028385 120 DPKAR 124 (210)
Q Consensus 120 ~p~~~ 124 (210)
.....
T Consensus 212 ~~~~v 216 (689)
T 3pvc_A 212 AAGFV 216 (689)
T ss_dssp CCHHH
T ss_pred CcHHH
Confidence 44433
No 332
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.38 E-value=0.19 Score=40.77 Aligned_cols=91 Identities=10% Similarity=0.098 Sum_probs=60.1
Q ss_pred CCEEEeC-CCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcc--cCC-CCCCCCCcccEEEECCc
Q 028385 9 RDTCRRA-APS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMD--VRD-MSFFEDESFDAVIDKGT 82 (210)
Q Consensus 9 ~~vLdiG-cG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d--~~~-~~~~~~~~fD~Vi~~~~ 82 (210)
.+||=.| +|. |.++..+++. +..+|+++|.+++-++.+++.-.. .++... ... +.....+.+|+|+....
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad----~vi~~~~~~~~~v~~~~~~g~Dvvid~~g 248 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAH----HVIDHSKPLAAEVAALGLGAPAFVFSTTH 248 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCS----EEECTTSCHHHHHHTTCSCCEEEEEECSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCC----EEEeCCCCHHHHHHHhcCCCceEEEECCC
Confidence 4688888 544 7888888886 556999999999988888764211 112111 000 11133457999987422
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
-...++...++|+++|+++++
T Consensus 249 -------------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 249 -------------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp -------------HHHHHHHHHHHSCTTCEEEEC
T ss_pred -------------chhhHHHHHHHhcCCCEEEEE
Confidence 234578888999999999766
No 333
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.38 E-value=0.16 Score=41.17 Aligned_cols=93 Identities=13% Similarity=0.126 Sum_probs=60.1
Q ss_pred CCCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-----CCCCCcccEEEE
Q 028385 7 GTRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-----FFEDESFDAVID 79 (210)
Q Consensus 7 ~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-----~~~~~~fD~Vi~ 79 (210)
...+||-+|+|. |..+..+++. |. +|+++|.++.-++.+++.-. -.++..+-.++. ......+|+|+.
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa----~~vi~~~~~~~~~~v~~~~~g~g~D~vid 263 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGA----DHGINRLEEDWVERVYALTGDRGADHILE 263 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTC----SEEEETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCC----CEEEcCCcccHHHHHHHHhCCCCceEEEE
Confidence 345799999765 6777777765 55 89999999998888876432 122222111110 012347999997
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
... ...+....++|+++|.++++..
T Consensus 264 ~~g--------------~~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 264 IAG--------------GAGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp ETT--------------SSCHHHHHHHEEEEEEEEEECC
T ss_pred CCC--------------hHHHHHHHHHhhcCCEEEEEec
Confidence 432 1236677889999999987754
No 334
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=94.35 E-value=0.045 Score=45.63 Aligned_cols=44 Identities=14% Similarity=0.165 Sum_probs=35.0
Q ss_pred CCCEEEeCCCCchhHHHHHHc----C--CCcEEEEeCCHHHHHHHHHhhc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD----G--YEDIVNIDISSVAIDMMKMKYE 51 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~----~--~~~v~~vD~s~~~~~~a~~~~~ 51 (210)
..+|+|+|+|+|.+...+++. + ..+++.||+|+...+.-+++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 468999999999999888753 1 2379999999988877776653
No 335
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.33 E-value=0.061 Score=43.83 Aligned_cols=91 Identities=18% Similarity=0.185 Sum_probs=57.8
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCC-CCCCCCCcccEEEECCccc
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD-MSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~-~~~~~~~~fD~Vi~~~~l~ 84 (210)
..+||-+|+|. |.++..+++. +. +|+++|.++.-++.+++.-. . .++...-.+ ..... +.+|+|+....-.
T Consensus 195 g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa--~--~vi~~~~~~~~~~~~-~g~Dvvid~~g~~ 268 (369)
T 1uuf_A 195 GKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGA--D--EVVNSRNADEMAAHL-KSFDFILNTVAAP 268 (369)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTC--S--EEEETTCHHHHHTTT-TCEEEEEECCSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC--c--EEeccccHHHHHHhh-cCCCEEEECCCCH
Confidence 35789999875 6777777765 55 79999999988888876321 1 122111001 11122 5799999743321
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
..++...++|+++|+++.+.
T Consensus 269 -------------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 269 -------------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp -------------CCHHHHHTTEEEEEEEEECC
T ss_pred -------------HHHHHHHHHhccCCEEEEec
Confidence 12566788999999987654
No 336
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.11 E-value=0.1 Score=41.85 Aligned_cols=56 Identities=2% Similarity=-0.084 Sum_probs=43.6
Q ss_pred CCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCC
Q 028385 9 RDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRD 65 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~ 65 (210)
..|||.-||+|..+....+.+. +.+|+|+++.+++.++++.... .....++.|+.+
T Consensus 254 ~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 310 (323)
T 1boo_A 254 DLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDNNISEEKITDIYNR 310 (323)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCSCSCHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 4699999999999998888876 8999999999999999998543 223333444433
No 337
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.01 E-value=0.22 Score=39.52 Aligned_cols=90 Identities=13% Similarity=0.172 Sum_probs=59.4
Q ss_pred CEEEeCC--CCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEE-cccCCCCCCCCCcccEEEECCccch
Q 028385 10 DTCRRAA--PSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQ-MDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 10 ~vLdiGc--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~-~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
+||=.|+ |.|..+..+++. |. +|++++.+++-.+.+++.-.. .++. .+.........+.+|+|+..-.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~----~vi~~~~~~~~~~~~~~~~d~v~d~~g--- 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGAN----RILSRDEFAESRPLEKQLWAGAIDTVG--- 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCS----EEEEGGGSSCCCSSCCCCEEEEEESSC---
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCC----EEEecCCHHHHHhhcCCCccEEEECCC---
Confidence 5999997 347777777776 55 899999999988888764321 1111 1111111133457999986321
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
. ..+++..++|+++|+++.+..
T Consensus 221 ---------~--~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 221 ---------D--KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp ---------H--HHHHHHHHTEEEEEEEEECCC
T ss_pred ---------c--HHHHHHHHHHhcCCEEEEEec
Confidence 1 268888999999999977643
No 338
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.94 E-value=0.22 Score=40.45 Aligned_cols=94 Identities=11% Similarity=0.029 Sum_probs=59.6
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEccc--CCCC----CCCCCcccEEEE
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDV--RDMS----FFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~--~~~~----~~~~~~fD~Vi~ 79 (210)
..+||-+|+|. |.++..+++. +..+|+++|.++.-.+.+++.-.. .++..+- .++. ...++.+|+|+.
T Consensus 191 g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~----~vi~~~~~~~~~~~~v~~~~~~g~D~vid 266 (373)
T 2fzw_A 191 GSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT----ECINPQDFSKPIQEVLIEMTDGGVDYSFE 266 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCS----EEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc----eEeccccccccHHHHHHHHhCCCCCEEEE
Confidence 34789999865 6667777765 555799999999988888754321 1221110 1110 011247999997
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCC-cEEEEEEc
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPG-GIYMLITY 118 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~Lkpg-G~~~~~~~ 118 (210)
...- ...++...++|+++ |+++++..
T Consensus 267 ~~g~-------------~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 267 CIGN-------------VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CSCC-------------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCCc-------------HHHHHHHHHhhccCCcEEEEEec
Confidence 4321 23577888999999 99976543
No 339
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.94 E-value=0.19 Score=40.75 Aligned_cols=94 Identities=7% Similarity=-0.032 Sum_probs=59.8
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEccc--CCCC----CCCCCcccEEEE
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDV--RDMS----FFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~--~~~~----~~~~~~fD~Vi~ 79 (210)
..+||-+|+|. |..+..+++. +..+|+++|.++.-.+.+++.-. . .++..+- .++. ....+.+|+|+.
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa--~--~vi~~~~~~~~~~~~i~~~t~gg~Dvvid 267 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA--T--ECLNPKDYDKPIYEVICEKTNGGVDYAVE 267 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC--S--EEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC--c--EEEecccccchHHHHHHHHhCCCCCEEEE
Confidence 34799999865 6677777765 55579999999998888875321 1 1221110 1110 011247999997
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCC-cEEEEEEc
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPG-GIYMLITY 118 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~Lkpg-G~~~~~~~ 118 (210)
.-.- ...++...++|+++ |+++++..
T Consensus 268 ~~g~-------------~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 268 CAGR-------------IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp CSCC-------------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred CCCC-------------HHHHHHHHHHHhcCCCEEEEEcc
Confidence 4321 24577888999999 99876543
No 340
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=93.81 E-value=0.12 Score=40.55 Aligned_cols=101 Identities=16% Similarity=0.218 Sum_probs=56.3
Q ss_pred CCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhh---cCCCCcEEE-EcccCCCCCCCCCcccEEEECCc----cchh-
Q 028385 16 APSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKY---EEIPQLKYL-QMDVRDMSFFEDESFDAVIDKGT----LDSL- 86 (210)
Q Consensus 16 cG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~~v~~~-~~d~~~~~~~~~~~fD~Vi~~~~----l~~~- 86 (210)
++.|.....+.+.....|..+|..-..- .++. .-.+..++. .+|+...+ ..+.+|+|++... -||.
T Consensus 150 ~~~~~~~~~~~k~~g~~vl~v~~~~~~p---~k~v~wi~Pi~GAt~~~~lDfg~p~--~~~k~DvV~SDMApn~sGh~yq 224 (320)
T 2hwk_A 150 HPQSDFSSFVSKLKGRTVLVVGEKLSVP---GKMVDWLSDRPEATFRARLDLGIPG--DVPKYDIIFVNVRTPYKYHHYQ 224 (320)
T ss_dssp CCCCCCHHHHHTSSCSEEEEEESCCCCT---TSEEEEEESSTTCSEECCGGGCSCT--TSCCEEEEEEECCCCCCSCHHH
T ss_pred cCCCCHHHHHhhCCCcEEEEEecccccC---CceeEeeccCCCceeecccccCCcc--ccCcCCEEEEcCCCCCCCcccc
Confidence 4566666666665444676666432110 1111 011334444 56665533 2367999999532 2221
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
.| .+......-++.-..++|+|||.|++-.|...+
T Consensus 225 QC-~DHarii~Lal~fA~~vLkPGGtfV~KvyggaD 259 (320)
T 2hwk_A 225 QC-EDHAIKLSMLTKKACLHLNPGGTCVSIGYGYAD 259 (320)
T ss_dssp HH-HHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCS
T ss_pred cc-chHHHHHHHHHHHHHHhcCCCceEEEEEecCCc
Confidence 00 000133444778889999999999999998773
No 341
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.78 E-value=0.13 Score=41.35 Aligned_cols=93 Identities=6% Similarity=0.069 Sum_probs=61.3
Q ss_pred CCCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC----C-CCCCcccEEEE
Q 028385 7 GTRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----F-FEDESFDAVID 79 (210)
Q Consensus 7 ~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~----~-~~~~~fD~Vi~ 79 (210)
...+||-+|+|. |..+..+++. +..+|+++|.+++-++.+++.-.. .++..+- +.. . .....+|+|+.
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~----~~i~~~~-~~~~~v~~~t~g~g~d~v~d 245 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGAD----AAVKSGA-GAADAIRELTGGQGATAVFD 245 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCS----EEEECST-THHHHHHHHHGGGCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCC----EEEcCCC-cHHHHHHHHhCCCCCeEEEE
Confidence 345788899865 7777777765 456899999999999988764321 1222111 110 0 12237999997
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.-. ....++...++|+++|+++++.
T Consensus 246 ~~G-------------~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 246 FVG-------------AQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp SSC-------------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CCC-------------CHHHHHHHHHHHhcCCEEEEEC
Confidence 432 1236788889999999997764
No 342
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.77 E-value=0.32 Score=39.97 Aligned_cols=100 Identities=7% Similarity=0.047 Sum_probs=58.6
Q ss_pred CCCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-----CCCCCcccEEEE
Q 028385 7 GTRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-----FFEDESFDAVID 79 (210)
Q Consensus 7 ~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-----~~~~~~fD~Vi~ 79 (210)
...+||=+|+|. |.++..+++. +..+|+++|.++.-++.+++.-.. .++..+-.+.. ......+|+|+.
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~----~vi~~~~~~~~~~i~~~t~g~g~D~vid 288 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGAD----HVIDPTKENFVEAVLDYTNGLGAKLFLE 288 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS----EEECTTTSCHHHHHHHHTTTCCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC----EEEcCCCCCHHHHHHHHhCCCCCCEEEE
Confidence 344788899865 6666777765 555899999999999988765321 12211111110 012346999997
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
.-.-.. .....+++.+.+.++++|+++++..
T Consensus 289 ~~g~~~--------~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 289 ATGVPQ--------LVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CSSCHH--------HHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCCCcH--------HHHHHHHHHHHhccCCCcEEEEeCC
Confidence 432110 1223333333455599999977643
No 343
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.71 E-value=0.25 Score=39.73 Aligned_cols=94 Identities=12% Similarity=0.097 Sum_probs=59.3
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC----C-CCCCcccEEEEC
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----F-FEDESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~----~-~~~~~fD~Vi~~ 80 (210)
..+||-+|+|. |..+..+++. +..+|+++|.+++-++.+++.-.. .++..+-.++. . .....+|+|+..
T Consensus 168 g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~----~~~~~~~~~~~~~v~~~~~g~g~D~vid~ 243 (348)
T 2d8a_A 168 GKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGAD----YVINPFEEDVVKEVMDITDGNGVDVFLEF 243 (348)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCS----EEECTTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC----EEECCCCcCHHHHHHHHcCCCCCCEEEEC
Confidence 45799999954 6666666665 544899999999988888754211 12211111110 0 123469999974
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
... ...++...++|+++|+++.+..
T Consensus 244 ~g~-------------~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 244 SGA-------------PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp SCC-------------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCC-------------HHHHHHHHHHHhcCCEEEEEcc
Confidence 321 2457778899999999877643
No 344
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.70 E-value=0.18 Score=40.94 Aligned_cols=94 Identities=10% Similarity=0.106 Sum_probs=59.3
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEccc--CCCC----CCCCCcccEEEE
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDV--RDMS----FFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~--~~~~----~~~~~~fD~Vi~ 79 (210)
..+||-+|+|. |..+..+++. +..+|+++|.++.-++.+++.-. . .++..+- .++. ....+.+|+|+.
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa--~--~vi~~~~~~~~~~~~~~~~~~~g~D~vid 268 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGA--T--DFVNPNDHSEPISQVLSKMTNGGVDFSLE 268 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC--C--EEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCC--c--eEEeccccchhHHHHHHHHhCCCCCEEEE
Confidence 34789999865 6677777765 55479999999998888875321 1 1221110 1110 011237999997
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCC-cEEEEEEc
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPG-GIYMLITY 118 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~Lkpg-G~~~~~~~ 118 (210)
.-.- ...++...++|+++ |+++++..
T Consensus 269 ~~g~-------------~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 269 CVGN-------------VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp CSCC-------------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCCC-------------HHHHHHHHHHhhcCCcEEEEEcC
Confidence 4321 23577888999999 99876543
No 345
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.69 E-value=0.2 Score=36.58 Aligned_cols=90 Identities=16% Similarity=0.178 Sum_probs=55.3
Q ss_pred CCCCEEEeCCCC--chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-------CCCCCcccE
Q 028385 7 GTRDTCRRAAPS--IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-------FFEDESFDA 76 (210)
Q Consensus 7 ~~~~vLdiGcG~--G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-------~~~~~~fD~ 76 (210)
...+||..|++. |.....++.. |. +|+++|.+++..+.+++.- .. .. .|..+.. ....+.+|+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g---~~-~~--~d~~~~~~~~~~~~~~~~~~~D~ 110 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLG---VE-YV--GDSRSVDFADEILELTDGYGVDV 110 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTC---CS-EE--EETTCSTHHHHHHHHTTTCCEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcC---CC-EE--eeCCcHHHHHHHHHHhCCCCCeE
Confidence 335799999533 5555555443 65 8999999998887765421 11 11 2332211 012346999
Q ss_pred EEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 77 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 77 Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
|+.+.. ...++...++|++||+++.+.
T Consensus 111 vi~~~g--------------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 111 VLNSLA--------------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEECCC--------------THHHHHHHHTEEEEEEEEECS
T ss_pred EEECCc--------------hHHHHHHHHHhccCCEEEEEc
Confidence 996432 134678889999999987654
No 346
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.68 E-value=0.23 Score=40.34 Aligned_cols=93 Identities=9% Similarity=0.011 Sum_probs=58.8
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEccc--CCCC----CCCCCcccEEEE
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDV--RDMS----FFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~--~~~~----~~~~~~fD~Vi~ 79 (210)
..+||-+|+|. |..+..+++. +..+|+++|.++.-++.+++.-. . .++..+- .++. ...++.+|+|+.
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa--~--~vi~~~~~~~~~~~~~~~~~~~g~D~vid 267 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA--T--ECVNPQDYKKPIQEVLTEMSNGGVDFSFE 267 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC--S--EEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC--c--eEecccccchhHHHHHHHHhCCCCcEEEE
Confidence 35789999865 6677777765 54479999999988888865321 1 1221110 1110 011247999997
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCC-cEEEEEE
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPG-GIYMLIT 117 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~Lkpg-G~~~~~~ 117 (210)
.-.- ...+....++|+++ |+++++.
T Consensus 268 ~~g~-------------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 268 VIGR-------------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp CSCC-------------HHHHHHHHHHBCTTTCEEEECS
T ss_pred CCCC-------------HHHHHHHHHHhhcCCcEEEEec
Confidence 4321 23577888999999 9987654
No 347
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=93.64 E-value=0.098 Score=46.15 Aligned_cols=111 Identities=12% Similarity=0.170 Sum_probs=66.3
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-----------CC--CcEEEEeC---CHHHHHHHHHhhc-----------CC------
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-----------GY--EDIVNIDI---SSVAIDMMKMKYE-----------EI------ 53 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-----------~~--~~v~~vD~---s~~~~~~a~~~~~-----------~~------ 53 (210)
...+|||+|-|+|.+.....+. .. -+++++|. +.+.+..+.+... ..
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 3458999999999887666442 11 25899998 7777775443211 01
Q ss_pred ----------CCcEEEEcccCC-CCCCC---CCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 54 ----------PQLKYLQMDVRD-MSFFE---DESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 54 ----------~~v~~~~~d~~~-~~~~~---~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
-.++...+|+.+ ++.+. +..||+++....- ....+.-=-..+++.+.++++|||.+ .+++
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~----p~~np~~w~~~~~~~l~~~~~~g~~~--~t~~ 219 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFA----PAKNPDMWTQNLFNAMARLARPGGTL--ATFT 219 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSC----GGGCGGGSCHHHHHHHHHHEEEEEEE--EESC
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCC----CcCChhhhhHHHHHHHHHHhCCCCEE--Eecc
Confidence 123455666655 22122 4679999864321 11111112357899999999999987 4555
Q ss_pred Cchh
Q 028385 120 DPKA 123 (210)
Q Consensus 120 ~p~~ 123 (210)
....
T Consensus 220 ~~~~ 223 (676)
T 3ps9_A 220 SAGF 223 (676)
T ss_dssp CCHH
T ss_pred CcHH
Confidence 4333
No 348
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.41 E-value=0.26 Score=39.46 Aligned_cols=90 Identities=11% Similarity=0.087 Sum_probs=58.3
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC------CCCCCcccEEEE
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS------FFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~------~~~~~~fD~Vi~ 79 (210)
..+||-+|+|. |..+..+++. +. +|+++|.++.-++.+++.-. . .+ .|..+.. ... +.+|+|+.
T Consensus 165 g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa--~--~~--~d~~~~~~~~~~~~~~-~~~d~vid 236 (339)
T 1rjw_A 165 GEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGA--D--LV--VNPLKEDAAKFMKEKV-GGVHAAVV 236 (339)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTC--S--EE--ECTTTSCHHHHHHHHH-SSEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCC--C--EE--ecCCCccHHHHHHHHh-CCCCEEEE
Confidence 35799999864 6666666665 55 89999999998888865321 1 11 2322111 001 46999987
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
...- ...++...++|+++|+++.+..
T Consensus 237 ~~g~-------------~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 237 TAVS-------------KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp SSCC-------------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCC-------------HHHHHHHHHHhhcCCEEEEecc
Confidence 4321 2357778899999999876543
No 349
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.40 E-value=0.56 Score=37.50 Aligned_cols=90 Identities=16% Similarity=0.084 Sum_probs=59.1
Q ss_pred CCCCEEEeCC--CCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-------CCCCCcccE
Q 028385 7 GTRDTCRRAA--PSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-------FFEDESFDA 76 (210)
Q Consensus 7 ~~~~vLdiGc--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-------~~~~~~fD~ 76 (210)
...+||-.|+ |.|.....+++. +. +|+++|.++..++.+++.-. . .++ |..+.. ......+|+
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga--~--~~~--d~~~~~~~~~~~~~~~~~~~d~ 238 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGA--D--ETV--NYTHPDWPKEVRRLTGGKGADK 238 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTC--S--EEE--ETTSTTHHHHHHHHTTTTCEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCC--C--EEE--cCCcccHHHHHHHHhCCCCceE
Confidence 3457999998 557777777765 55 89999999998888865321 1 122 322211 012347999
Q ss_pred EEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 77 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 77 Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
|+.... . ..++...+.|+++|+++.+.
T Consensus 239 vi~~~g-~-------------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 239 VVDHTG-A-------------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp EEESSC-S-------------SSHHHHHHHEEEEEEEEESS
T ss_pred EEECCC-H-------------HHHHHHHHhhccCCEEEEEe
Confidence 997543 1 13677788999999987654
No 350
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.36 E-value=0.082 Score=42.51 Aligned_cols=92 Identities=15% Similarity=0.102 Sum_probs=59.4
Q ss_pred CCCCEEEeCCCC-chhHHHHHHcC--CCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEc----cc-CCCCCCCCCcccEEE
Q 028385 7 GTRDTCRRAAPS-IVMSEDMVKDG--YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQM----DV-RDMSFFEDESFDAVI 78 (210)
Q Consensus 7 ~~~~vLdiGcG~-G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~----d~-~~~~~~~~~~fD~Vi 78 (210)
...+||-+|+|. |.++..+++.- ..+|+++|.++.-.+.+++.-.. .++.. |. ..+. ....+|+|+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~----~vi~~~~~~~~~~~~~--~g~g~D~vi 243 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGAD----YVSEMKDAESLINKLT--DGLGASIAI 243 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCS----EEECHHHHHHHHHHHH--TTCCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCC----EEeccccchHHHHHhh--cCCCccEEE
Confidence 345799999964 66666776643 34899999999988888764321 12211 11 1111 133799999
Q ss_pred ECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 79 DKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
..-.- ...++...++|+++|.++.+.
T Consensus 244 d~~g~-------------~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 244 DLVGT-------------EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp ESSCC-------------HHHHHHHHHHEEEEEEEEECC
T ss_pred ECCCC-------------hHHHHHHHHHhhcCCEEEEeC
Confidence 74321 235777889999999987754
No 351
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=93.28 E-value=0.24 Score=39.97 Aligned_cols=89 Identities=18% Similarity=0.256 Sum_probs=58.1
Q ss_pred CCEEEeCCCC-chhH-HHHH-Hc-CCCcEEEEeCCHH---HHHHHHHhhcCCCCcEEEEcccCCCC-----CCCCCcccE
Q 028385 9 RDTCRRAAPS-IVMS-EDMV-KD-GYEDIVNIDISSV---AIDMMKMKYEEIPQLKYLQMDVRDMS-----FFEDESFDA 76 (210)
Q Consensus 9 ~~vLdiGcG~-G~~~-~~l~-~~-~~~~v~~vD~s~~---~~~~a~~~~~~~~~v~~~~~d~~~~~-----~~~~~~fD~ 76 (210)
.+||-+|+|. |.++ ..++ +. +..+|+++|.+++ -.+.+++.- .+.+ |..+-. .. .+.+|+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lG-----a~~v--~~~~~~~~~i~~~-~gg~Dv 245 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELD-----ATYV--DSRQTPVEDVPDV-YEQMDF 245 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTT-----CEEE--ETTTSCGGGHHHH-SCCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcC-----Cccc--CCCccCHHHHHHh-CCCCCE
Confidence 5799999854 6777 7777 65 5534999999887 778776532 2222 322211 01 237999
Q ss_pred EEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 77 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 77 Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
|+....- ...++...++|+++|+++.+..
T Consensus 246 vid~~g~-------------~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 246 IYEATGF-------------PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp EEECSCC-------------HHHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCC-------------hHHHHHHHHHHhcCCEEEEEeC
Confidence 9874321 2357788899999999877643
No 352
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.09 E-value=0.26 Score=40.03 Aligned_cols=94 Identities=15% Similarity=0.047 Sum_probs=59.3
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEccc--CCCC----CCCCCcccEEEE
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDV--RDMS----FFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~--~~~~----~~~~~~fD~Vi~ 79 (210)
..+||-+|+|. |.++..+++. +..+|+++|.+++-.+.+++.-. . .++..+- .++. ....+.+|+|+.
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa--~--~vi~~~~~~~~~~~~v~~~~~~g~Dvvid 271 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA--T--DCLNPRELDKPVQDVITELTAGGVDYSLD 271 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC--S--EEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC--c--EEEccccccchHHHHHHHHhCCCccEEEE
Confidence 35789999864 6677777765 55479999999988888865321 1 1221110 1110 011237999997
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCC-cEEEEEEc
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPG-GIYMLITY 118 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~Lkpg-G~~~~~~~ 118 (210)
.-. ....++...++|+++ |+++++..
T Consensus 272 ~~G-------------~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 272 CAG-------------TAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp SSC-------------CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred CCC-------------CHHHHHHHHHHhhcCCCEEEEECC
Confidence 422 124577888999999 99876543
No 353
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.06 E-value=1.8 Score=33.17 Aligned_cols=64 Identities=6% Similarity=0.027 Sum_probs=46.7
Q ss_pred CCEEEeCCCCchhHHHHHHc----CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 9 RDTCRRAAPSIVMSEDMVKD----GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~~----~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
++||=.|+ |.++..+++. +. +|++++.++........ .+++++.+|+.++. -..+|+|+.....
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-----~~~~~~~~D~~d~~---~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRA-----SGAEPLLWPGEEPS---LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHH-----TTEEEEESSSSCCC---CTTCCEEEECCCC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhh-----CCCeEEEecccccc---cCCCCEEEECCCc
Confidence 57999995 7777776653 55 89999998865544332 46899999998865 3568999976553
No 354
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.01 E-value=0.64 Score=37.09 Aligned_cols=95 Identities=13% Similarity=0.112 Sum_probs=59.2
Q ss_pred CCCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-----CCCCCcccEEEE
Q 028385 7 GTRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-----FFEDESFDAVID 79 (210)
Q Consensus 7 ~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-----~~~~~~fD~Vi~ 79 (210)
...+||=.|+|. |.++..+++. +...++++|.++.-++.+++.-. ..++..+-.+.+ .-....+|+|+.
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa----~~~i~~~~~~~~~~~~~~~~~~g~d~v~d 235 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA----MQTFNSSEMSAPQMQSVLRELRFNQLILE 235 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC----SEEEETTTSCHHHHHHHHGGGCSSEEEEE
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCC----eEEEeCCCCCHHHHHHhhcccCCcccccc
Confidence 345788889865 5555566655 66568999999998888876532 122222111110 012345888886
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
... ....++...++|++||.+++...
T Consensus 236 ~~G-------------~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 236 TAG-------------VPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp CSC-------------SHHHHHHHHHHCCTTCEEEECCC
T ss_pred ccc-------------ccchhhhhhheecCCeEEEEEec
Confidence 422 23457778889999999977654
No 355
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.99 E-value=0.34 Score=39.52 Aligned_cols=94 Identities=18% Similarity=0.210 Sum_probs=59.3
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcc---cCC----C-CCCCCCcccEE
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMD---VRD----M-SFFEDESFDAV 77 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d---~~~----~-~~~~~~~fD~V 77 (210)
..+||-+|+|. |..+..+++. +..+|+++|.+++-++.+++.-. . .++..+ -.+ + .......+|+|
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa--~--~vi~~~~~~~~~~~~~v~~~~~g~g~Dvv 271 (380)
T 1vj0_A 196 GKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA--D--LTLNRRETSVEERRKAIMDITHGRGADFI 271 (380)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC--S--EEEETTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCC--c--EEEeccccCcchHHHHHHHHhCCCCCcEE
Confidence 34799999764 6677777765 43589999999998888875321 1 222221 011 1 00123369999
Q ss_pred EECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 78 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 78 i~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
+....- ...+....++|+++|+++.+..
T Consensus 272 id~~g~-------------~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 272 LEATGD-------------SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp EECSSC-------------TTHHHHHHHHEEEEEEEEECCC
T ss_pred EECCCC-------------HHHHHHHHHHHhcCCEEEEEec
Confidence 974321 1246778899999999876643
No 356
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.95 E-value=0.84 Score=36.47 Aligned_cols=106 Identities=10% Similarity=0.096 Sum_probs=64.1
Q ss_pred CCCCCCCCCCEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC----------C----------CCcEE
Q 028385 1 MATPSTGTRDTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE----------I----------PQLKY 58 (210)
Q Consensus 1 ~~~~~~~~~~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~----------~----------~~v~~ 58 (210)
|++|..+ +|.=||+|+ ..++..++..|. +|+..|++++.++.+.++..+ . .++.+
T Consensus 1 Ma~p~~~--~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~ 77 (319)
T 3ado_A 1 MASPAAG--DVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS 77 (319)
T ss_dssp ------C--EEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE
T ss_pred CCCCCCC--eEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc
Confidence 5566544 788899986 345566667777 899999999998887665421 0 01121
Q ss_pred EEcccCCCCCCCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 59 LQMDVRDMSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 59 ~~~d~~~~~~~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
. .|+.+ .-..-|+|+-. +.+-+ +-.+++++++-++++|+.++...+.+-+.
T Consensus 78 ~-~~l~~----a~~~ad~ViEa-v~E~l-------~iK~~lf~~l~~~~~~~aIlaSNTSsl~i 128 (319)
T 3ado_A 78 C-TNLAE----AVEGVVHIQEC-VPENL-------DLKRKIFAQLDSIVDDRVVLSSSSSCLLP 128 (319)
T ss_dssp E-CCHHH----HTTTEEEEEEC-CCSCH-------HHHHHHHHHHHTTCCSSSEEEECCSSCCH
T ss_pred c-cchHh----HhccCcEEeec-cccHH-------HHHHHHHHHHHHHhhhcceeehhhhhccc
Confidence 1 22211 01235777642 23333 77889999999999999888665544333
No 357
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=92.64 E-value=1.1 Score=41.42 Aligned_cols=78 Identities=10% Similarity=0.104 Sum_probs=57.1
Q ss_pred CCCCCEEEeCCCCchhHHHHHHcCC-CcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCC------------C--CC-
Q 028385 6 TGTRDTCRRAAPSIVMSEDMVKDGY-EDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM------------S--FF- 69 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~------------~--~~- 69 (210)
....+++|+-||.|.++.-+.+.|. ..+.++|+++.+.+.-+.+. ++..++..|+.++ . .+
T Consensus 538 ~~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~---p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp 614 (1002)
T 3swr_A 538 LPKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN---PGSTVFTEDCNILLKLVMAGETTNSRGQRLP 614 (1002)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC---TTSEEECSCHHHHHHHHHHTCSBCTTCCBCC
T ss_pred CCCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC---CCCccccccHHHHhhhccchhhhhhhhhhcc
Confidence 4456899999999999999988886 56889999999998887776 5566666664321 0 02
Q ss_pred CCCcccEEEECCccchh
Q 028385 70 EDESFDAVIDKGTLDSL 86 (210)
Q Consensus 70 ~~~~fD~Vi~~~~l~~~ 86 (210)
..+.+|+|+....-..+
T Consensus 615 ~~~~vDll~GGpPCQ~F 631 (1002)
T 3swr_A 615 QKGDVEMLCGGPPCQGF 631 (1002)
T ss_dssp CTTTCSEEEECCCCTTC
T ss_pred cCCCeeEEEEcCCCcch
Confidence 23579999987665443
No 358
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.56 E-value=0.83 Score=35.69 Aligned_cols=109 Identities=12% Similarity=0.107 Sum_probs=65.7
Q ss_pred CCEEEeCCCCc-----hhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCC----C-----CCCcc
Q 028385 9 RDTCRRAAPSI-----VMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF----F-----EDESF 74 (210)
Q Consensus 9 ~~vLdiGcG~G-----~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~----~-----~~~~f 74 (210)
..+|=.|++.| .++..+++.|. +|+.++.++...+.+++......++.++.+|+.+... + .-+..
T Consensus 32 k~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 110 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKL 110 (293)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 35788887633 34455666676 7999999976555444433322567889999987430 0 11478
Q ss_pred cEEEECCccchh-----ccCCCchHH-----------HHHHHHHHHHhccCCcEEEEEEc
Q 028385 75 DAVIDKGTLDSL-----MCGTNAPIS-----------ASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 75 D~Vi~~~~l~~~-----~~~~~~~~~-----------~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
|+++.+...... .+...+.++ ...+++.+.+.++.+|.++.++.
T Consensus 111 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 111 DFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 999987664320 011112222 23456677777888898877663
No 359
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=92.41 E-value=1.5 Score=35.32 Aligned_cols=108 Identities=9% Similarity=0.075 Sum_probs=73.3
Q ss_pred CCCEEEeCCCCchhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhc-------------------------CCCCcEEEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYE-------------------------EIPQLKYLQ 60 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~-------------------------~~~~v~~~~ 60 (210)
...|+-+|||.-.....+... ....++=+|. |+.++.=++... ...+.+++.
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 457999999998888777664 2336777776 444443222221 125678999
Q ss_pred cccCCCC---------CCCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 61 MDVRDMS---------FFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 61 ~d~~~~~---------~~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
+|+.+.. ++..+.-=++++-+++.++ +.+...++++.+.+.. |+|.+++.+...|.
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL-----~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~ 234 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYM-----TPEQSANLLKWAANSF-ERAMFINYEQVNMG 234 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGS-----CHHHHHHHHHHHHHHC-SSEEEEEEEECCTT
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCC-----CHHHHHHHHHHHHHhC-CCceEEEEeccCCC
Confidence 9987732 2444556688888888888 7788999999999876 55666666655443
No 360
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.40 E-value=0.18 Score=40.20 Aligned_cols=89 Identities=17% Similarity=0.092 Sum_probs=56.0
Q ss_pred CCCEEEeCCC--CchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCC-CC------CCCCCcccEE
Q 028385 8 TRDTCRRAAP--SIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD-MS------FFEDESFDAV 77 (210)
Q Consensus 8 ~~~vLdiGcG--~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~-~~------~~~~~~fD~V 77 (210)
..+||-.|++ .|.....+++. +. +|+++|.+++.++.+++.-. . . ..|..+ -. ....+.+|+|
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~---~-~--~~d~~~~~~~~~~~~~~~~~~~d~v 218 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGF---D-A--AFNYKTVNSLEEALKKASPDGYDCY 218 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTC---S-E--EEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCC---c-E--EEecCCHHHHHHHHHHHhCCCCeEE
Confidence 3579999983 45555555554 55 89999999988888743311 1 1 123332 11 0112479999
Q ss_pred EECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 78 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 78 i~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+.+.. . ..+....++|++||+++++.
T Consensus 219 i~~~g-----------~---~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 219 FDNVG-----------G---EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EESSC-----------H---HHHHHHHTTEEEEEEEEECC
T ss_pred EECCC-----------h---HHHHHHHHHHhcCCEEEEEe
Confidence 87532 1 24678889999999997754
No 361
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.38 E-value=0.32 Score=39.07 Aligned_cols=91 Identities=20% Similarity=0.267 Sum_probs=57.5
Q ss_pred CCCEEEeCCCC--chhHHHHHHc--CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC------CCCC-CcccE
Q 028385 8 TRDTCRRAAPS--IVMSEDMVKD--GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS------FFED-ESFDA 76 (210)
Q Consensus 8 ~~~vLdiGcG~--G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~------~~~~-~~fD~ 76 (210)
..+||-.|+|+ |.....+++. +. +|+++|.+++.++.+++.-. . .+. |..+.. .... +.+|+
T Consensus 171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~---~-~~~--~~~~~~~~~~~~~~~~~~~~d~ 243 (347)
T 1jvb_A 171 TKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGA---D-YVI--NASMQDPLAEIRRITESKGVDA 243 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHTC---S-EEE--ETTTSCHHHHHHHHTTTSCEEE
T ss_pred CCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCC---C-EEe--cCCCccHHHHHHHHhcCCCceE
Confidence 35799999984 4455555544 55 89999999998888865321 1 112 221111 0112 47999
Q ss_pred EEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 77 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 77 Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
|+....- ...++...++|+++|+++.+..
T Consensus 244 vi~~~g~-------------~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 244 VIDLNNS-------------EKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp EEESCCC-------------HHHHTTGGGGEEEEEEEEECCS
T ss_pred EEECCCC-------------HHHHHHHHHHHhcCCEEEEECC
Confidence 9975331 2357778899999999877543
No 362
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.31 E-value=0.19 Score=40.24 Aligned_cols=43 Identities=12% Similarity=0.021 Sum_probs=37.6
Q ss_pred CCEEEeCCCCchhHHHHHHcCCCcEEEEeCCH---HHHHHHHHhhcC
Q 028385 9 RDTCRRAAPSIVMSEDMVKDGYEDIVNIDISS---VAIDMMKMKYEE 52 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~---~~~~~a~~~~~~ 52 (210)
..|||.-||+|..+....+.+. +.+|+|+++ ..++.++++...
T Consensus 244 ~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 244 STVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp CEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC--
T ss_pred CEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHH
Confidence 4699999999999998888876 899999999 999999998753
No 363
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.25 E-value=0.23 Score=39.63 Aligned_cols=93 Identities=11% Similarity=0.049 Sum_probs=58.0
Q ss_pred CCCCEEEeCCC--CchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC----CCCCCcccEEEE
Q 028385 7 GTRDTCRRAAP--SIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----FFEDESFDAVID 79 (210)
Q Consensus 7 ~~~~vLdiGcG--~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~----~~~~~~fD~Vi~ 79 (210)
...+||-.|++ -|..+..+++. +. +|+++|.+++-++.+.+.... -.++...-.+.. ....+.+|+|+.
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 224 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGF---DGAIDYKNEDLAAGLKRECPKGIDVFFD 224 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCC---SEEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCC---CEEEECCCHHHHHHHHHhcCCCceEEEE
Confidence 33579999983 36666666665 55 899999999988887443321 112211111110 011357999987
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
... ...+....+.|+++|+++++.
T Consensus 225 ~~g--------------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 225 NVG--------------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp SSC--------------HHHHHHHHTTEEEEEEEEECC
T ss_pred CCC--------------cchHHHHHHHHhhCCEEEEEe
Confidence 432 135788889999999997654
No 364
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.14 E-value=0.87 Score=34.74 Aligned_cols=106 Identities=12% Similarity=0.206 Sum_probs=66.2
Q ss_pred CCEEEeCCCCch---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCC---------CCCcccE
Q 028385 9 RDTCRRAAPSIV---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF---------EDESFDA 76 (210)
Q Consensus 9 ~~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~---------~~~~fD~ 76 (210)
..+|=.|++.|. ++..+++.|. +|+.+|.++..++...+... .++.++.+|+.+.... .-+..|+
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFG--PRVHALRSDIADLNEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC--CcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 457888876653 3344555676 89999999988777665542 4678899998874300 0146899
Q ss_pred EEECCccchhc-cCCCchHHH-----------HHHHHHHHHhccCCcEEEEEE
Q 028385 77 VIDKGTLDSLM-CGTNAPISA-----------SQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 77 Vi~~~~l~~~~-~~~~~~~~~-----------~~~l~~i~r~LkpgG~~~~~~ 117 (210)
++.+....... +...+.++. ..+.+.+...++.+|.++.++
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 99876543210 111122222 234566777777888887765
No 365
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.98 E-value=0.28 Score=39.28 Aligned_cols=92 Identities=12% Similarity=0.074 Sum_probs=57.1
Q ss_pred CCCEEEeCCCC--chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-----CCCCCcccEEEE
Q 028385 8 TRDTCRRAAPS--IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-----FFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~--G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-----~~~~~~fD~Vi~ 79 (210)
..+||-+|+|+ |..+..+++. |. +|+++|.++.-++.+++.-.. .++...-.+.. ......+|+|+.
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~----~~~~~~~~~~~~~~~~~~~~~g~Dvvid 219 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAA----YVIDTSTAPLYETVMELTNGIGADAAID 219 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCS----EEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCc----EEEeCCcccHHHHHHHHhCCCCCcEEEE
Confidence 35799999974 6666666665 65 899999999888888764321 12221111110 012347999997
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
...- .. ..+..++|+++|+++++..
T Consensus 220 ~~g~----------~~----~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 220 SIGG----------PD----GNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp SSCH----------HH----HHHHHHTEEEEEEEEECCC
T ss_pred CCCC----------hh----HHHHHHHhcCCCEEEEEee
Confidence 5331 11 2234479999999977654
No 366
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=91.95 E-value=0.36 Score=38.62 Aligned_cols=90 Identities=16% Similarity=0.145 Sum_probs=57.6
Q ss_pred CCCEEEeCC--CCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCC---CC----CCCCCcccEE
Q 028385 8 TRDTCRRAA--PSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD---MS----FFEDESFDAV 77 (210)
Q Consensus 8 ~~~vLdiGc--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~---~~----~~~~~~fD~V 77 (210)
..+||-.|+ |.|.....+++. +. +|+++|.++..++.+++.... . .+. |..+ .. ....+.+|+|
T Consensus 156 g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~g~-~--~~~--d~~~~~~~~~~~~~~~~~~~d~v 229 (345)
T 2j3h_A 156 GETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKFGF-D--DAF--NYKEESDLTAALKRCFPNGIDIY 229 (345)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTSCC-S--EEE--ETTSCSCSHHHHHHHCTTCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCC-c--eEE--ecCCHHHHHHHHHHHhCCCCcEE
Confidence 357999997 346666666664 55 899999999888888744321 1 112 3222 11 0112469999
Q ss_pred EECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 78 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 78 i~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+.... . ..++...++|++||+++++.
T Consensus 230 i~~~g------------~--~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 230 FENVG------------G--KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EESSC------------H--HHHHHHHTTEEEEEEEEECC
T ss_pred EECCC------------H--HHHHHHHHHHhcCCEEEEEc
Confidence 87432 1 35788889999999987653
No 367
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=91.67 E-value=0.29 Score=39.20 Aligned_cols=94 Identities=12% Similarity=0.115 Sum_probs=57.5
Q ss_pred CCCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC----CCCCCcccEEEEC
Q 028385 7 GTRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----FFEDESFDAVIDK 80 (210)
Q Consensus 7 ~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~----~~~~~~fD~Vi~~ 80 (210)
...+||-+|+|. |..+..+++. +..+|+++|.+++-++.+++. . . .++..+-.++. ....+.+|+|+..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a--~--~v~~~~~~~~~~~~~~~~~~g~D~vid~ 238 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A--D--RLVNPLEEDLLEVVRRVTGSGVEVLLEF 238 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C--S--EEECTTTSCHHHHHHHHHSSCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H--H--hccCcCccCHHHHHHHhcCCCCCEEEEC
Confidence 345799999854 6666666665 444899999998877666543 1 1 12211111110 0013469999974
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
..- ...++...++|+++|+++.+..
T Consensus 239 ~g~-------------~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 239 SGN-------------EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp SCC-------------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCC-------------HHHHHHHHHHHhcCCEEEEEec
Confidence 321 2357778899999999876643
No 368
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.61 E-value=1.7 Score=33.09 Aligned_cols=108 Identities=8% Similarity=0.056 Sum_probs=65.4
Q ss_pred CCEEEeCCC--Cch---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCcEEEEcccCCCCC----C-----CCC
Q 028385 9 RDTCRRAAP--SIV---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSF----F-----EDE 72 (210)
Q Consensus 9 ~~vLdiGcG--~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~----~-----~~~ 72 (210)
..+|=.|++ .|. ++..+++.|. +|+.++.++...+.+.+..... .++.++.+|+.+... + .-+
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVG 86 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHS
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 457778875 332 4455566677 8999998875555544443322 368999999988530 0 013
Q ss_pred cccEEEECCccchh-----ccCCCchHHHH-----------HHHHHHHHhccCCcEEEEEE
Q 028385 73 SFDAVIDKGTLDSL-----MCGTNAPISAS-----------QMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 73 ~fD~Vi~~~~l~~~-----~~~~~~~~~~~-----------~~l~~i~r~LkpgG~~~~~~ 117 (210)
..|+++.+...... .....+.++.. .+++.+...++++|.++.++
T Consensus 87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 87 VIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 68999987654320 01111223322 35667777888889887776
No 369
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=91.42 E-value=0.16 Score=40.87 Aligned_cols=91 Identities=14% Similarity=0.178 Sum_probs=57.3
Q ss_pred CCCEEEeCCC--CchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-------CCCCCcccEE
Q 028385 8 TRDTCRRAAP--SIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-------FFEDESFDAV 77 (210)
Q Consensus 8 ~~~vLdiGcG--~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-------~~~~~~fD~V 77 (210)
..+||-+|++ .|.....+++. +. +|+++|.++...+.+++.-. . .+ .|..+.. ...++.+|+|
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~--~--~~--~d~~~~~~~~~~~~~~~~~~~D~v 242 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGG--E--VF--IDFTKEKDIVGAVLKATDGGAHGV 242 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTC--C--EE--EETTTCSCHHHHHHHHHTSCEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCC--c--eE--EecCccHhHHHHHHHHhCCCCCEE
Confidence 3579999983 45666666654 55 89999999887777765321 1 11 2333111 0011269999
Q ss_pred EECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 78 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 78 i~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
+..... ...++...+.|+++|+++.+..
T Consensus 243 i~~~g~-------------~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 243 INVSVS-------------EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EECSSC-------------HHHHHHHTTSEEEEEEEEECCC
T ss_pred EECCCc-------------HHHHHHHHHHHhcCCEEEEEeC
Confidence 975331 2457888999999999876643
No 370
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.18 E-value=0.16 Score=40.71 Aligned_cols=62 Identities=19% Similarity=0.237 Sum_probs=41.6
Q ss_pred cEEE-EcccCC-CCCCCCCcccEEEECCccchhc--c--CCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 56 LKYL-QMDVRD-MSFFEDESFDAVIDKGTLDSLM--C--GTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 56 v~~~-~~d~~~-~~~~~~~~fD~Vi~~~~l~~~~--~--~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
..++ ++|... +..+++++||+|+....+.--. + ...-.......+.++.++|+|||.+++..
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 4677 899866 2225678999999976653110 0 00112356788899999999999987654
No 371
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=91.12 E-value=0.64 Score=36.88 Aligned_cols=92 Identities=12% Similarity=0.011 Sum_probs=58.6
Q ss_pred CCCEEEeCC-C-CchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-----CCCCCcccEEEE
Q 028385 8 TRDTCRRAA-P-SIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-----FFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGc-G-~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-----~~~~~~fD~Vi~ 79 (210)
..+||-.|+ | .|..+..+++. +. +|++++.+++-++.+++.-.. .++..+-.+.. ......+|+|+.
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~----~~~~~~~~~~~~~~~~~~~~~g~Dvvid 215 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAW----ETIDYSHEDVAKRVLELTDGKKCPVVYD 215 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCS----EEEETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCC----EEEeCCCccHHHHHHHHhCCCCceEEEE
Confidence 357888883 3 36666666665 65 899999999988888764311 12221111110 022357999997
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
...- ..+....+.|+++|+++++..
T Consensus 216 ~~g~--------------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 216 GVGQ--------------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp SSCG--------------GGHHHHHTTEEEEEEEEECCC
T ss_pred CCCh--------------HHHHHHHHHhcCCCEEEEEec
Confidence 5332 246677889999999977653
No 372
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=91.08 E-value=0.16 Score=41.02 Aligned_cols=93 Identities=15% Similarity=0.091 Sum_probs=57.4
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccC-CC-CCCCCCcccEEEECCcc
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVR-DM-SFFEDESFDAVIDKGTL 83 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~-~~-~~~~~~~fD~Vi~~~~l 83 (210)
..+||-+|+|. |..+..+++. +. +|+++|.++.-++.+++.-. . .++..+-. +. .... +.+|+|+....-
T Consensus 180 g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa--~--~v~~~~~~~~~~~~~~-~~~D~vid~~g~ 253 (360)
T 1piw_A 180 GKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGA--D--HYIATLEEGDWGEKYF-DTFDLIVVCASS 253 (360)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTC--S--EEEEGGGTSCHHHHSC-SCEEEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCC--C--EEEcCcCchHHHHHhh-cCCCEEEECCCC
Confidence 35799999854 6666677665 65 79999999988888876321 1 22222111 11 0012 479999975332
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
- ....++...++|++||+++.+.
T Consensus 254 ~-----------~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 254 L-----------TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp S-----------TTCCTTTGGGGEEEEEEEEECC
T ss_pred C-----------cHHHHHHHHHHhcCCCEEEEec
Confidence 0 0112455678999999987654
No 373
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=91.08 E-value=0.74 Score=36.62 Aligned_cols=92 Identities=14% Similarity=0.113 Sum_probs=57.9
Q ss_pred CCCCEEEeCC--CCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-----CCCCCcccEEE
Q 028385 7 GTRDTCRRAA--PSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-----FFEDESFDAVI 78 (210)
Q Consensus 7 ~~~~vLdiGc--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-----~~~~~~fD~Vi 78 (210)
...+||-.|+ |-|..+..+++. |. +|+++|.++.-++.+++.-. -.++..+-.+.. ......+|+|+
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga----~~~~~~~~~~~~~~~~~~~~~~g~D~vi 222 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGA----EYLINASKEDILRQVLKFTNGKGVDASF 222 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTC----SEEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC----cEEEeCCCchHHHHHHHHhCCCCceEEE
Confidence 3457899985 336666666665 55 89999999998888766421 122222111110 01245699999
Q ss_pred ECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 79 DKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
....- ..++...+.|++||+++.+.
T Consensus 223 d~~g~--------------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 223 DSVGK--------------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp ECCGG--------------GGHHHHHHHEEEEEEEEECC
T ss_pred ECCCh--------------HHHHHHHHHhccCCEEEEEc
Confidence 74321 34677788999999997764
No 374
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.05 E-value=2 Score=34.01 Aligned_cols=90 Identities=13% Similarity=0.093 Sum_probs=56.4
Q ss_pred CCEEEeCCCC--chhHHHHHHcCCC-cEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 9 RDTCRRAAPS--IVMSEDMVKDGYE-DIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 9 ~~vLdiGcG~--G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
.+|.=||+|. +.++..+.+.+.. +|++.|.+++.++.+++.- -+.-...|..+. .-...|+|+..-..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G----~~~~~~~~~~~~---~~~~aDvVilavp~-- 104 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG----IIDEGTTSIAKV---EDFSPDFVMLSSPV-- 104 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT----SCSEEESCTTGG---GGGCCSEEEECSCG--
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCC----CcchhcCCHHHH---hhccCCEEEEeCCH--
Confidence 5788899875 4455555555543 7999999998888776532 111122233220 11347998864332
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEE
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYML 115 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~ 115 (210)
.....+++++...+++|..++-
T Consensus 105 --------~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 105 --------RTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp --------GGHHHHHHHHHHHSCTTCEEEE
T ss_pred --------HHHHHHHHHHhhccCCCcEEEE
Confidence 4456788899999999876643
No 375
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=91.04 E-value=4.3 Score=31.29 Aligned_cols=74 Identities=12% Similarity=0.135 Sum_probs=49.7
Q ss_pred CCEEEeCCCCch---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCcEEEEcccCCC-C---CC------CCCc
Q 028385 9 RDTCRRAAPSIV---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDM-S---FF------EDES 73 (210)
Q Consensus 9 ~~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~-~---~~------~~~~ 73 (210)
..||=.|++.|. ++..+++.|. +|+.++.++.-.+.+.+..... .++.++.+|+.+. . .+ .-+.
T Consensus 13 k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~ 91 (311)
T 3o26_A 13 RCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGK 91 (311)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSS
T ss_pred cEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCC
Confidence 356777766552 3344455576 8999999998777666655332 4789999999886 2 00 0146
Q ss_pred ccEEEECCcc
Q 028385 74 FDAVIDKGTL 83 (210)
Q Consensus 74 fD~Vi~~~~l 83 (210)
.|+++.+...
T Consensus 92 iD~lv~nAg~ 101 (311)
T 3o26_A 92 LDILVNNAGV 101 (311)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCcc
Confidence 8999988764
No 376
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.94 E-value=0.84 Score=36.13 Aligned_cols=90 Identities=10% Similarity=0.028 Sum_probs=56.2
Q ss_pred CCCEEEeCC--CCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-------CCCCCcccEE
Q 028385 8 TRDTCRRAA--PSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-------FFEDESFDAV 77 (210)
Q Consensus 8 ~~~vLdiGc--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-------~~~~~~fD~V 77 (210)
..+||-.|+ |.|.....+++. +. +|+++|.+++.++.+++.-. . .+. |..+.. ......+|+|
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~---~-~~~--~~~~~~~~~~~~~~~~~~~~D~v 213 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGA---W-QVI--NYREEDLVERLKEITGGKKVRVV 213 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTC---S-EEE--ETTTSCHHHHHHHHTTTCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC---C-EEE--ECCCccHHHHHHHHhCCCCceEE
Confidence 356898884 335555555554 65 89999999988888776321 1 112 222211 0123469999
Q ss_pred EECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 78 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 78 i~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
+.... ...++...++|+++|+++++..
T Consensus 214 i~~~g--------------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 214 YDSVG--------------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EECSC--------------GGGHHHHHHTEEEEEEEEECCC
T ss_pred EECCc--------------hHHHHHHHHHhcCCCEEEEEec
Confidence 97543 1236778899999999877643
No 377
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=90.90 E-value=1.1 Score=40.26 Aligned_cols=54 Identities=19% Similarity=0.093 Sum_probs=41.4
Q ss_pred CCCCEEEeCCCCchhHHHHHHcC------CCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEccc
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDG------YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDV 63 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~ 63 (210)
..++|+|+=||.|.++.-+.+.| +.-+.++|+++.+++.-+.+. ++..+.+.|+
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh---p~~~~~~~di 270 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH---PQTEVRNEKA 270 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC---TTSEEEESCH
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC---CCCceecCcH
Confidence 44679999999999998887654 446889999999999888776 4445555544
No 378
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=90.83 E-value=2 Score=33.21 Aligned_cols=106 Identities=13% Similarity=0.112 Sum_probs=63.5
Q ss_pred CCEEEeCCCCc---hhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCC----C-----CCCcccE
Q 028385 9 RDTCRRAAPSI---VMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF----F-----EDESFDA 76 (210)
Q Consensus 9 ~~vLdiGcG~G---~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~----~-----~~~~fD~ 76 (210)
..+|=.|++.| .++..+++.|. +|+.+|.++..++...+... .++.++.+|+.+... + .-+..|+
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIG--CGAAACRVDVSDEQQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHC--SSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcC--CcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 34677776655 23445556676 89999999887777665552 467889999987430 0 0136899
Q ss_pred EEECCccchhc-cCCCchHHHH-----------HHHHHHHHhc--cCCcEEEEEE
Q 028385 77 VIDKGTLDSLM-CGTNAPISAS-----------QMLGEVSRLL--KPGGIYMLIT 117 (210)
Q Consensus 77 Vi~~~~l~~~~-~~~~~~~~~~-----------~~l~~i~r~L--kpgG~~~~~~ 117 (210)
++.+....... +...+.++.. .+.+.+.+.+ +.+|.++.++
T Consensus 107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~is 161 (277)
T 3gvc_A 107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLS 161 (277)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 99876653321 1122333332 2344555555 4567776654
No 379
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.83 E-value=2 Score=35.54 Aligned_cols=92 Identities=12% Similarity=0.033 Sum_probs=60.1
Q ss_pred CCCEEEeCCCCchhHHHHH----HcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC---CCCCCcccEEEEC
Q 028385 8 TRDTCRRAAPSIVMSEDMV----KDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS---FFEDESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~---~~~~~~fD~Vi~~ 80 (210)
..+|+=+|+|. ++..++ +.+. .|+++|.+++.++.+++. .+.++.+|+.+.. ...-...|+|++.
T Consensus 4 ~~~viIiG~Gr--~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~-----g~~vi~GDat~~~~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 4 GMRVIIAGFGR--FGQITGRLLLSSGV-KMVVLDHDPDHIETLRKF-----GMKVFYGDATRMDLLESAGAAKAEVLINA 75 (413)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHT-----TCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred CCeEEEECCCH--HHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhC-----CCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence 45788888864 443333 3455 899999999999988753 4667899998843 1234568888863
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.. .......+....|.+.|...++...
T Consensus 76 ~~----------~~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 76 ID----------DPQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp CS----------SHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CC----------ChHHHHHHHHHHHHhCCCCeEEEEE
Confidence 21 1333444555666677887776643
No 380
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=90.76 E-value=0.58 Score=37.81 Aligned_cols=87 Identities=18% Similarity=0.237 Sum_probs=55.6
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCH---HHHHHHHHhhcCCCCcEEEEcccCCCCCCC------CCcccE
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISS---VAIDMMKMKYEEIPQLKYLQMDVRDMSFFE------DESFDA 76 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~---~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~------~~~fD~ 76 (210)
..+||-+|+|. |..+..+++. |. +|+++|.++ +-.+.+++.- .+.+ | .+ . +. .+.+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~g-----a~~v--~-~~-~-~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETK-----TNYY--N-SS-N-GYDKLKDSVGKFDV 249 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHT-----CEEE--E-CT-T-CSHHHHHHHCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhC-----Ccee--c-hH-H-HHHHHHHhCCCCCE
Confidence 45799999832 4445555554 66 899999988 7777776532 2222 3 32 2 21 146999
Q ss_pred EEECCccchhccCCCchHHHHHHH-HHHHHhccCCcEEEEEEc
Q 028385 77 VIDKGTLDSLMCGTNAPISASQML-GEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 77 Vi~~~~l~~~~~~~~~~~~~~~~l-~~i~r~LkpgG~~~~~~~ 118 (210)
|+...... ..+ +...+.|+++|.++++..
T Consensus 250 vid~~g~~-------------~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 250 IIDATGAD-------------VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp EEECCCCC-------------THHHHHHGGGEEEEEEEEECSC
T ss_pred EEECCCCh-------------HHHHHHHHHHHhcCCEEEEEec
Confidence 99754321 135 788899999999877643
No 381
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.72 E-value=1.9 Score=33.18 Aligned_cols=107 Identities=16% Similarity=0.153 Sum_probs=64.8
Q ss_pred CCEEEeCCCCch---hHHHHHHcCCCcEEEEeCC------------HHHHHHHHHhhc-CCCCcEEEEcccCCCCC----
Q 028385 9 RDTCRRAAPSIV---MSEDMVKDGYEDIVNIDIS------------SVAIDMMKMKYE-EIPQLKYLQMDVRDMSF---- 68 (210)
Q Consensus 9 ~~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~s------------~~~~~~a~~~~~-~~~~v~~~~~d~~~~~~---- 68 (210)
..+|=.|++.|. ++..+++.|. +|+.+|.+ ...++.+..... ...++.++.+|+.+...
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 89 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRE 89 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 357777776653 3344555676 89999987 555555544432 22578899999987430
Q ss_pred C-----CCCcccEEEECCccchhccCCCchHH-----------HHHHHHHHHHhccCCcEEEEEE
Q 028385 69 F-----EDESFDAVIDKGTLDSLMCGTNAPIS-----------ASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 69 ~-----~~~~fD~Vi~~~~l~~~~~~~~~~~~-----------~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+ .-+..|+++.+........ ..+.++ ...+++.+.+.|+.+|.++.++
T Consensus 90 ~~~~~~~~g~id~lv~nAg~~~~~~-~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 90 LANAVAEFGKLDVVVANAGICPLGA-HLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCT-TCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHcCCCCEEEECCCcCcccC-cCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 0 0136899998766532211 112222 2344566777778888887765
No 382
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=90.69 E-value=0.15 Score=41.31 Aligned_cols=92 Identities=22% Similarity=0.168 Sum_probs=55.2
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEc-ccCCCCCCCCCcccEEEECCccc
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQM-DVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~-d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
..+||-+|+|. |..+..+++. +. +|+++|.+++-.+.+++.... . .++.. +...+... .+.+|+|+..-.-.
T Consensus 181 g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa-~--~vi~~~~~~~~~~~-~~g~D~vid~~g~~ 255 (357)
T 2cf5_A 181 GLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGA-D--DYVIGSDQAKMSEL-ADSLDYVIDTVPVH 255 (357)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCC-S--CEEETTCHHHHHHS-TTTEEEEEECCCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCC-c--eeeccccHHHHHHh-cCCCCEEEECCCCh
Confidence 34788899754 5666666665 65 899999998877777644321 1 11111 11111101 23699999753321
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
..++...++|+++|+++.+.
T Consensus 256 -------------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 256 -------------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp -------------CCSHHHHTTEEEEEEEEECS
T ss_pred -------------HHHHHHHHHhccCCEEEEeC
Confidence 12455678999999997754
No 383
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=90.59 E-value=1 Score=35.21 Aligned_cols=109 Identities=14% Similarity=0.149 Sum_probs=64.7
Q ss_pred CCEEEeCCCC--ch---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCC----C-----CCCcc
Q 028385 9 RDTCRRAAPS--IV---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF----F-----EDESF 74 (210)
Q Consensus 9 ~~vLdiGcG~--G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~----~-----~~~~f 74 (210)
..+|=.|+++ |. ++..+++.|. +|+.+|.++...+...+.......+.++.+|+.+... + .-+..
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 109 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSL 109 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3577788753 32 4555566677 7999999875544444333222457889999987430 0 01468
Q ss_pred cEEEECCccchh-----ccCCCchHH-----------HHHHHHHHHHhccCCcEEEEEEc
Q 028385 75 DAVIDKGTLDSL-----MCGTNAPIS-----------ASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 75 D~Vi~~~~l~~~-----~~~~~~~~~-----------~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
|+++.+...... .+...+.++ ...+++.+.+.++.+|.++.++.
T Consensus 110 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 110 DFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred CEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 999988664321 011112222 23455667777788898877663
No 384
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.46 E-value=0.88 Score=36.59 Aligned_cols=89 Identities=12% Similarity=0.205 Sum_probs=55.9
Q ss_pred CCCEEEeCCC--CchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-------CCCCCcccEE
Q 028385 8 TRDTCRRAAP--SIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-------FFEDESFDAV 77 (210)
Q Consensus 8 ~~~vLdiGcG--~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-------~~~~~~fD~V 77 (210)
..+||-.|++ .|.....+++. |. +|++++.+++.++.+++.-. . .+. |..+.. ......+|+|
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga--~--~~~--d~~~~~~~~~~~~~~~~~~~D~v 243 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGA--H--EVF--NHREVNYIDKIKKYVGEKGIDII 243 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTC--S--EEE--ETTSTTHHHHHHHHHCTTCEEEE
T ss_pred cCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCC--C--EEE--eCCCchHHHHHHHHcCCCCcEEE
Confidence 3579999973 35555555554 55 89999999988887765321 1 112 222211 0123469999
Q ss_pred EECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 78 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 78 i~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+.... . ..+....++|+++|+++++.
T Consensus 244 i~~~G------------~--~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 244 IEMLA------------N--VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EESCH------------H--HHHHHHHHHEEEEEEEEECC
T ss_pred EECCC------------h--HHHHHHHHhccCCCEEEEEe
Confidence 87422 1 24677889999999987664
No 385
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=90.22 E-value=0.63 Score=36.88 Aligned_cols=89 Identities=16% Similarity=0.189 Sum_probs=54.9
Q ss_pred CEEEeCC--CCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEc-cc-CC-CCCCCCCcccEEEECCcc
Q 028385 10 DTCRRAA--PSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQM-DV-RD-MSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 10 ~vLdiGc--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~-d~-~~-~~~~~~~~fD~Vi~~~~l 83 (210)
+||-+|+ |.|..+..+++. +. +|++++.+++-++.+++.-. . .++.. +. .+ ......+.+|+|+....-
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa--~--~~i~~~~~~~~~~~~~~~~~~d~vid~~g~ 226 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGA--K--EVLAREDVMAERIRPLDKQRWAAAVDPVGG 226 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTC--S--EEEECC---------CCSCCEEEEEECSTT
T ss_pred eEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC--c--EEEecCCcHHHHHHHhcCCcccEEEECCcH
Confidence 7999997 346777777765 54 89999999887787765321 1 11111 11 01 111233579999874221
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
..+....++|+++|+++++.
T Consensus 227 --------------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 227 --------------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp --------------TTHHHHHHTEEEEEEEEECS
T ss_pred --------------HHHHHHHHhhccCCEEEEEe
Confidence 13667788999999997654
No 386
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=90.12 E-value=0.26 Score=39.93 Aligned_cols=93 Identities=17% Similarity=0.154 Sum_probs=55.2
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEc-ccCCCCCCCCCcccEEEECCccc
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQM-DVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~-d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
..+||-+|+|. |..+..+++. +. +|++++.++.-.+.+++.... . .++.. +...+... .+.+|+|+......
T Consensus 188 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa-~--~v~~~~~~~~~~~~-~~~~D~vid~~g~~ 262 (366)
T 1yqd_A 188 GKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGA-D--SFLVSRDQEQMQAA-AGTLDGIIDTVSAV 262 (366)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCC-S--EEEETTCHHHHHHT-TTCEEEEEECCSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCC-c--eEEeccCHHHHHHh-hCCCCEEEECCCcH
Confidence 34788899754 5566666665 55 899999999887777644421 1 12211 10011101 13699999753321
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
. .++...++|+++|+++.+..
T Consensus 263 ~-------------~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 263 H-------------PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp C-------------CSHHHHHHEEEEEEEEECCC
T ss_pred H-------------HHHHHHHHHhcCCEEEEEcc
Confidence 1 24456788999999876643
No 387
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=90.08 E-value=1.3 Score=33.74 Aligned_cols=110 Identities=7% Similarity=-0.003 Sum_probs=64.7
Q ss_pred CCCCEEEeCCCCch---hHHHHHHcCCCcEEEE-eCCHHHHHHHHHhhcC-CCCcEEEEcccCCCCC----C-----CCC
Q 028385 7 GTRDTCRRAAPSIV---MSEDMVKDGYEDIVNI-DISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSF----F-----EDE 72 (210)
Q Consensus 7 ~~~~vLdiGcG~G~---~~~~l~~~~~~~v~~v-D~s~~~~~~a~~~~~~-~~~v~~~~~d~~~~~~----~-----~~~ 72 (210)
....+|=.|++.|. ++..+++.|. +|+.+ +.++...+...+.... ..++.++.+|+.+... + .-+
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 33467888877663 3445555677 77777 6666666655554433 2578899999987430 0 013
Q ss_pred cccEEEECCccc-hh-ccCCCchHH-----------HHHHHHHHHHhccCCcEEEEEE
Q 028385 73 SFDAVIDKGTLD-SL-MCGTNAPIS-----------ASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 73 ~fD~Vi~~~~l~-~~-~~~~~~~~~-----------~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
..|+++.+.... .. .+...+.++ ...+.+.+.+.++++|.++.++
T Consensus 86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 689999876432 11 111222222 2345566777777788877665
No 388
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=90.05 E-value=0.96 Score=34.35 Aligned_cols=107 Identities=11% Similarity=0.137 Sum_probs=62.1
Q ss_pred CCEEEeCCCCchhHHH----HHH-cCCCcEEEEeCCHHHHHHHHHhhcC-CCCcEEEEcccCCCCC---CC------CCc
Q 028385 9 RDTCRRAAPSIVMSED----MVK-DGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSF---FE------DES 73 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~----l~~-~~~~~v~~vD~s~~~~~~a~~~~~~-~~~v~~~~~d~~~~~~---~~------~~~ 73 (210)
.+||=.|+. |.++.. |++ .+. +|+.++.++...+...+.... ..++.++.+|+.+... +- -+.
T Consensus 5 k~vlITGas-ggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 5 HVALVTGGN-KGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CEEEESSCS-SHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CEEEEeCCC-cHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 456766654 444444 445 566 899999998766655544422 2568899999887430 00 136
Q ss_pred ccEEEECCccchhccCCCc-hHH-----------HHHHHHHHHHhccCCcEEEEEE
Q 028385 74 FDAVIDKGTLDSLMCGTNA-PIS-----------ASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 74 fD~Vi~~~~l~~~~~~~~~-~~~-----------~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+|+|+.+............ ..+ ...+++.+.+.++++|.++.++
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 8999987654321111111 122 2245566667777778877765
No 389
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=89.97 E-value=1.6 Score=33.15 Aligned_cols=110 Identities=9% Similarity=0.033 Sum_probs=64.5
Q ss_pred CCCCEEEeCCC-CchhH----HHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCC----C-----CCC
Q 028385 7 GTRDTCRRAAP-SIVMS----EDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF----F-----EDE 72 (210)
Q Consensus 7 ~~~~vLdiGcG-~G~~~----~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~----~-----~~~ 72 (210)
...+||=.|++ +|.++ ..+++.+. +|+.++.+....+.+++......++.++.+|+.+... + .-+
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 91 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD 91 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 34568888875 23333 44455576 8999988865444444333333558889999987430 0 124
Q ss_pred cccEEEECCccchh-----ccCC-CchHHHH-----------HHHHHHHHhccCCcEEEEEE
Q 028385 73 SFDAVIDKGTLDSL-----MCGT-NAPISAS-----------QMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 73 ~fD~Vi~~~~l~~~-----~~~~-~~~~~~~-----------~~l~~i~r~LkpgG~~~~~~ 117 (210)
..|+++.+...... .+.. .+.++.. .+++.+.+.++++|.++.++
T Consensus 92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 92 SLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp CEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 68999987665321 0111 2223332 34566677777788887765
No 390
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=89.97 E-value=0.74 Score=36.85 Aligned_cols=90 Identities=13% Similarity=0.118 Sum_probs=58.0
Q ss_pred CCCEEEeCCC--CchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-----CCCCCcccEEEE
Q 028385 8 TRDTCRRAAP--SIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-----FFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG--~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-----~~~~~~fD~Vi~ 79 (210)
..+||-.|++ -|..+..+++. |. +|++++.+++-.+.+++.-. -.+...+ .+.. ......+|+|+.
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga----~~v~~~~-~~~~~~v~~~~~~~g~Dvvid 233 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGA----DIVLPLE-EGWAKAVREATGGAGVDMVVD 233 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTC----SEEEESS-TTHHHHHHHHTTTSCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC----cEEecCc-hhHHHHHHHHhCCCCceEEEE
Confidence 4579999973 36677777765 55 89999999988888876432 1222222 2211 022347999997
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
...- ..+....+.|+++|+++++.
T Consensus 234 ~~g~--------------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 234 PIGG--------------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp SCC----------------CHHHHHHTEEEEEEEEEC-
T ss_pred CCch--------------hHHHHHHHhhcCCCEEEEEE
Confidence 4331 14677888999999998764
No 391
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.78 E-value=5.3 Score=33.43 Aligned_cols=92 Identities=15% Similarity=0.263 Sum_probs=57.2
Q ss_pred CCEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc-------------C--C--CCcEEEEcccCCCCCC
Q 028385 9 RDTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE-------------E--I--PQLKYLQMDVRDMSFF 69 (210)
Q Consensus 9 ~~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-------------~--~--~~v~~~~~d~~~~~~~ 69 (210)
.+|.=||+|. +.++..+++.|. +|+.+|.+++.++.+++... . . ....+ ..|...+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~--- 112 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL--- 112 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGG---
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHH---
Confidence 4688899986 344555556676 89999999998887765321 0 0 11222 3343222
Q ss_pred CCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEE
Q 028385 70 EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYML 115 (210)
Q Consensus 70 ~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~ 115 (210)
...|+|+..-. + ...-...+++++...++++.+++.
T Consensus 113 --~~aDlVIeaVp-e-------~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 113 --STVDLVVEAVF-E-------DMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp --TTCSEEEECCC-S-------CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --CCCCEEEEcCC-C-------CHHHHHHHHHHHHhhCCCCeEEEe
Confidence 24688886432 1 113456788899999999887754
No 392
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=89.72 E-value=2 Score=34.03 Aligned_cols=89 Identities=11% Similarity=0.046 Sum_probs=57.1
Q ss_pred CCCEEEeCC--CCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-------CCCCCcccEE
Q 028385 8 TRDTCRRAA--PSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-------FFEDESFDAV 77 (210)
Q Consensus 8 ~~~vLdiGc--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-------~~~~~~fD~V 77 (210)
..+||-.|+ |.|.....+++. +. +|+++|.+++.++.+++.-. . ... |..+.. ......+|+|
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~---~-~~~--d~~~~~~~~~i~~~~~~~~~d~v 218 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGC---H-HTI--NYSTQDFAEVVREITGGKGVDVV 218 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTC---S-EEE--ETTTSCHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC---C-EEE--ECCCHHHHHHHHHHhCCCCCeEE
Confidence 356899985 456666666665 55 89999999988888765321 1 112 222211 0113469999
Q ss_pred EECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 78 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 78 i~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+....- ..++...++|+++|+++.+.
T Consensus 219 i~~~g~--------------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 219 YDSIGK--------------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EECSCT--------------TTHHHHHHTEEEEEEEEECC
T ss_pred EECCcH--------------HHHHHHHHhhccCCEEEEEe
Confidence 975321 34677889999999987664
No 393
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=89.59 E-value=0.33 Score=38.37 Aligned_cols=86 Identities=16% Similarity=0.159 Sum_probs=55.6
Q ss_pred CCCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 7 GTRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 7 ~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
...+||-+|+|. |..+..+++. |. +|++++ +++-.+.+++.-. -.++ -| .... .+.+|+|+..-.
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa----~~v~-~d---~~~v-~~g~Dvv~d~~g-- 208 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGV----RHLY-RE---PSQV-TQKYFAIFDAVN-- 208 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTE----EEEE-SS---GGGC-CSCEEEEECC----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCC----CEEE-cC---HHHh-CCCccEEEECCC--
Confidence 345799999954 7777777776 66 899999 8888888876432 1122 23 2213 567999986321
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
. ..+.+..++|+++|+++.+.
T Consensus 209 ----------~--~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 209 ----------S--QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp -----------------TTGGGEEEEEEEEEEC
T ss_pred ----------c--hhHHHHHHHhcCCCEEEEEe
Confidence 1 12356788999999997763
No 394
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=89.58 E-value=1.8 Score=34.77 Aligned_cols=90 Identities=10% Similarity=-0.010 Sum_probs=55.6
Q ss_pred CCCEEEeCCC--CchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-------CCCCCcccEE
Q 028385 8 TRDTCRRAAP--SIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-------FFEDESFDAV 77 (210)
Q Consensus 8 ~~~vLdiGcG--~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-------~~~~~~fD~V 77 (210)
..+||-.|++ .|.....+++. +. +|+++|.+++.++.+++.-. . ... |..+.. ......+|+|
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~---~-~~~--~~~~~~~~~~~~~~~~~~~~d~v 235 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGA---A-AGF--NYKKEDFSEATLKFTKGAGVNLI 235 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTC---S-EEE--ETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC---c-EEE--ecCChHHHHHHHHHhcCCCceEE
Confidence 3468888853 35555555554 55 89999999998888854321 1 112 222111 0123469999
Q ss_pred EECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 78 IDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 78 i~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
+....- ..+....++|+++|.++++..
T Consensus 236 i~~~G~--------------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 236 LDCIGG--------------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp EESSCG--------------GGHHHHHHHEEEEEEEEECCC
T ss_pred EECCCc--------------hHHHHHHHhccCCCEEEEEec
Confidence 975431 135667889999999977643
No 395
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.58 E-value=3.1 Score=30.72 Aligned_cols=90 Identities=9% Similarity=-0.073 Sum_probs=55.8
Q ss_pred CCEEEeCCCCchhHHHHHH----cCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC---CCCCCcccEEEECC
Q 028385 9 RDTCRRAAPSIVMSEDMVK----DGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS---FFEDESFDAVIDKG 81 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~----~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~---~~~~~~fD~Vi~~~ 81 (210)
++|+=+|+ |.++..+++ .+. +|+.+|.+++.++...+. .++.++.+|..+.. ...-...|+|++..
T Consensus 1 M~iiIiG~--G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 1 MKVIIIGG--ETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKK----LKATIIHGDGSHKEILRDAEVSKNDVVVILT 73 (218)
T ss_dssp CCEEEECC--HHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHH----SSSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHH----cCCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence 35777776 556655554 355 899999999988765543 24678999988732 11234689888642
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEE
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYML 115 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~ 115 (210)
.- ......+....+.+.+...++.
T Consensus 74 ~~----------d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 74 PR----------DEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp SC----------HHHHHHHHHHHHHTSCCCEEEE
T ss_pred CC----------cHHHHHHHHHHHHHcCCCeEEE
Confidence 21 2334445555555556666544
No 396
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.47 E-value=4.4 Score=28.87 Aligned_cols=94 Identities=12% Similarity=-0.005 Sum_probs=54.8
Q ss_pred CCCEEEeCCCC-ch-hHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC---CC-CCCcccEEEEC
Q 028385 8 TRDTCRRAAPS-IV-MSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS---FF-EDESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiGcG~-G~-~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~---~~-~~~~fD~Vi~~ 80 (210)
..+|+=+|+|. |. ++..+.+. +. +|+++|.+++.++.+++. .+.++.+|..+.. .. .-+.+|+|+..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~-----g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~ 112 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSE-----GRNVISGDATDPDFWERILDTGHVKLVLLA 112 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHT-----TCCEEECCTTCHHHHHTBCSCCCCCEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHC-----CCCEEEcCCCCHHHHHhccCCCCCCEEEEe
Confidence 45799998764 32 22333444 55 899999999888776642 3556777765521 12 23468988863
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
..- ......+-...+.+.|++.++...
T Consensus 113 ~~~----------~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 113 MPH----------HQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CSS----------HHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCC----------hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 221 122222333455566777776554
No 397
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=89.45 E-value=3.6 Score=27.87 Aligned_cols=64 Identities=16% Similarity=0.190 Sum_probs=44.3
Q ss_pred CCEEEeCCCCchhHHHH----HHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC---CCCCCcccEEEEC
Q 028385 9 RDTCRRAAPSIVMSEDM----VKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS---FFEDESFDAVIDK 80 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l----~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~---~~~~~~fD~Vi~~ 80 (210)
.+|+=+|+|. ++..+ .+.+. +|+++|.+++.++.+++. .+.++.+|..+.. ...-..+|+|+..
T Consensus 7 ~~v~I~G~G~--iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~-----~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 7 YEYIVIGSEA--AGVGLVRELTAAGK-KVLAVDKSKEKIELLEDE-----GFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CSEEEECCSH--HHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT-----TCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CEEEEECCCH--HHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC-----CCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 4799999864 44444 34466 899999999988877653 4678888887732 1223568988864
No 398
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=89.17 E-value=1.3 Score=35.46 Aligned_cols=90 Identities=16% Similarity=0.129 Sum_probs=56.9
Q ss_pred CCCEEEeC-CCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCC----CCCCCCcccEEEEC
Q 028385 8 TRDTCRRA-APS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM----SFFEDESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiG-cG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~----~~~~~~~fD~Vi~~ 80 (210)
..+||=+| +|. |..+..+++. |. +|+++|.++.-++.+++.-.. .++..+ .+. .....+.+|+|+..
T Consensus 151 g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~----~vi~~~-~~~~~~~~~~~~~g~Dvv~d~ 224 (346)
T 3fbg_A 151 GKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGAD----IVLNHK-ESLLNQFKTQGIELVDYVFCT 224 (346)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCS----EEECTT-SCHHHHHHHHTCCCEEEEEES
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCc----EEEECC-ccHHHHHHHhCCCCccEEEEC
Confidence 34688884 443 6666666665 55 899999999988888874321 111111 111 01223579999974
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
.. ....++...++|+++|+++.+
T Consensus 225 ~g-------------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 225 FN-------------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp SC-------------HHHHHHHHHHHEEEEEEEEES
T ss_pred CC-------------chHHHHHHHHHhccCCEEEEE
Confidence 22 234567888999999999654
No 399
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=89.15 E-value=1.5 Score=35.38 Aligned_cols=91 Identities=13% Similarity=0.073 Sum_probs=58.3
Q ss_pred CCCEEEeCC--CCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC----CCCCCcccEEEEC
Q 028385 8 TRDTCRRAA--PSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----FFEDESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiGc--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~----~~~~~~fD~Vi~~ 80 (210)
..+||-.|+ |.|..+..+++. +. +|++++.+++-++.+++.-. . .++..+-.+.. ....+.+|+|+..
T Consensus 164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga--~--~~~~~~~~~~~~~~~~~~~~g~D~vid~ 238 (362)
T 2c0c_A 164 GKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGC--D--RPINYKTEPVGTVLKQEYPEGVDVVYES 238 (362)
T ss_dssp TCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTC--S--EEEETTTSCHHHHHHHHCTTCEEEEEEC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCC--c--EEEecCChhHHHHHHHhcCCCCCEEEEC
Confidence 357899993 457777777775 55 89999999988888876321 1 12221111110 0113469999974
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.. . ..++.+.++|+++|+++++.
T Consensus 239 ~g------------~--~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 239 VG------------G--AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp SC------------T--HHHHHHHHHEEEEEEEEECC
T ss_pred CC------------H--HHHHHHHHHHhcCCEEEEEe
Confidence 32 1 35778889999999987654
No 400
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=88.96 E-value=0.18 Score=38.99 Aligned_cols=62 Identities=15% Similarity=0.121 Sum_probs=38.6
Q ss_pred cEEEEcccCC-CCCCCCCcccEEEECCccchhc--cCCC-ch----HHHHHHHHHHHHhccCCcEEEEEE
Q 028385 56 LKYLQMDVRD-MSFFEDESFDAVIDKGTLDSLM--CGTN-AP----ISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 56 v~~~~~d~~~-~~~~~~~~fD~Vi~~~~l~~~~--~~~~-~~----~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
..++++|..+ +..+++++||+|+....+.--. +... .. .-....+.++.++|||||.+++..
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 3567777654 2224567899999876643110 0000 11 245677888999999999987653
No 401
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=88.87 E-value=1.9 Score=34.26 Aligned_cols=94 Identities=12% Similarity=0.047 Sum_probs=56.8
Q ss_pred CCCEEEeCCCCc-hhHHHHHH-cCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCC-----CCCCCCcccEEEEC
Q 028385 8 TRDTCRRAAPSI-VMSEDMVK-DGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM-----SFFEDESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiGcG~G-~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~-----~~~~~~~fD~Vi~~ 80 (210)
..+||=+|+|.+ .++..+++ .+..+|+++|.+++-++.+++.-.. .++...-.+. .......+|.++..
T Consensus 164 g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~----~~i~~~~~~~~~~v~~~t~g~g~d~~~~~ 239 (348)
T 4eez_A 164 GDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD----VTINSGDVNPVDEIKKITGGLGVQSAIVC 239 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS----EEEEC-CCCHHHHHHHHTTSSCEEEEEEC
T ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe----EEEeCCCCCHHHHhhhhcCCCCceEEEEe
Confidence 346888999863 44444444 3556899999999988887765422 1221111111 00123457777653
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
.. -...+....+.|+++|.+++...
T Consensus 240 ~~-------------~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 240 AV-------------ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp CS-------------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred cc-------------CcchhheeheeecCCceEEEEec
Confidence 22 23457778899999999877643
No 402
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=88.83 E-value=2.1 Score=32.64 Aligned_cols=74 Identities=18% Similarity=0.207 Sum_probs=46.9
Q ss_pred CCEEEeCCCCch---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC---CCCcEEEEcccCCCCC----CC-----CCc
Q 028385 9 RDTCRRAAPSIV---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE---IPQLKYLQMDVRDMSF----FE-----DES 73 (210)
Q Consensus 9 ~~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---~~~v~~~~~d~~~~~~----~~-----~~~ 73 (210)
..+|=.|++.|. ++..+++.|. +|+.++.++...+...+.... ..++.++.+|+.+... +. -+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR 86 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 467888876552 3344455576 899999998776655444432 1357888999887420 00 135
Q ss_pred ccEEEECCcc
Q 028385 74 FDAVIDKGTL 83 (210)
Q Consensus 74 fD~Vi~~~~l 83 (210)
.|+++.+...
T Consensus 87 id~lv~~Ag~ 96 (267)
T 2gdz_A 87 LDILVNNAGV 96 (267)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 7999987653
No 403
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=88.66 E-value=5.4 Score=29.85 Aligned_cols=74 Identities=7% Similarity=0.077 Sum_probs=49.2
Q ss_pred CCCCEEEeCCCCch---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCC----C-CCCcccEEE
Q 028385 7 GTRDTCRRAAPSIV---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF----F-EDESFDAVI 78 (210)
Q Consensus 7 ~~~~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~----~-~~~~fD~Vi 78 (210)
...+||=.|++.|. ++..+++.|. +|+.++.++..++...+... .++.+..+|+.+... + .-+..|+++
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~li 89 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALK--DNYTIEVCNLANKEECSNLISKTSNLDILV 89 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC--SSEEEEECCTTSHHHHHHHHHTCSCCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhc--cCccEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence 34467877776652 3344455676 89999999988777666553 367888899877420 0 124689999
Q ss_pred ECCcc
Q 028385 79 DKGTL 83 (210)
Q Consensus 79 ~~~~l 83 (210)
.+...
T Consensus 90 ~~Ag~ 94 (249)
T 3f9i_A 90 CNAGI 94 (249)
T ss_dssp ECCC-
T ss_pred ECCCC
Confidence 87654
No 404
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=88.38 E-value=4 Score=38.94 Aligned_cols=77 Identities=12% Similarity=0.105 Sum_probs=55.9
Q ss_pred CCCCEEEeCCCCchhHHHHHHcCC-CcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCC------------C--CCC-
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKDGY-EDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM------------S--FFE- 70 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~------------~--~~~- 70 (210)
...+++|+-||.|.++.-+.+.|. ..+.++|+++.+++.-+.+. ++..+...|+.++ . .++
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~---p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~ 926 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNN---PGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQ 926 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHC---TTSEEECSCHHHHHHHHTTTCSBCSSCCBCCC
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC---CCCcEeeccHHHHhHhhhccchhhhhhhhccc
Confidence 456799999999999999988886 46899999999999887776 4455666554311 0 022
Q ss_pred CCcccEEEECCccchh
Q 028385 71 DESFDAVIDKGTLDSL 86 (210)
Q Consensus 71 ~~~fD~Vi~~~~l~~~ 86 (210)
.+.+|+|+....-..+
T Consensus 927 ~~~vDvl~GGpPCQ~F 942 (1330)
T 3av4_A 927 KGDVEMLCGGPPCQGF 942 (1330)
T ss_dssp TTTCSEEEECCCCTTT
T ss_pred cCccceEEecCCCccc
Confidence 3468999987665544
No 405
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=88.33 E-value=2.8 Score=32.59 Aligned_cols=105 Identities=14% Similarity=0.072 Sum_probs=67.4
Q ss_pred CEEEeCCCCch---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCC---------CCCCcccEE
Q 028385 10 DTCRRAAPSIV---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF---------FEDESFDAV 77 (210)
Q Consensus 10 ~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~---------~~~~~fD~V 77 (210)
.+|=-|++.|. .+..|++.|. +|+.+|.+++.++.+.+... .++.++.+|+.+... -.-+..|++
T Consensus 31 valVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL 107 (273)
T 4fgs_A 31 IAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIG--GGAVGIQADSANLAELDRLYEKVKAEAGRIDVL 107 (273)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred EEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 35666776663 3445556677 89999999998887766653 456788899887430 012568999
Q ss_pred EECCccchh-ccCCCchHH-----------HHHHHHHHHHhccCCcEEEEEE
Q 028385 78 IDKGTLDSL-MCGTNAPIS-----------ASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 78 i~~~~l~~~-~~~~~~~~~-----------~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+.+...... .+.+-+.++ ...+.+.+.+.|+.+|.++.+.
T Consensus 108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 988654322 122223333 3345677788888888876654
No 406
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=88.32 E-value=3.1 Score=34.67 Aligned_cols=93 Identities=11% Similarity=0.082 Sum_probs=58.2
Q ss_pred CCCCEEEeCC-C-CchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCC------------------
Q 028385 7 GTRDTCRRAA-P-SIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM------------------ 66 (210)
Q Consensus 7 ~~~~vLdiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~------------------ 66 (210)
...+||=+|+ | -|.++..+++....++++++.++.-++.+++.-.. .++...-.+.
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~----~vi~~~~~d~~~~~~~~~~~~~~~~~~~ 303 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAE----AIIDRNAEGYRFWKDENTQDPKEWKRFG 303 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCC----EEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCc----EEEecCcCcccccccccccchHHHHHHH
Confidence 3346898987 3 36777777776334899999999988888764321 1121111100
Q ss_pred ---CC-CCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 67 ---SF-FEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 67 ---~~-~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.. .....+|+|+..-. . ..+....++|++||.++++.
T Consensus 304 ~~i~~~t~g~g~Dvvid~~G------------~--~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 304 KRIRELTGGEDIDIVFEHPG------------R--ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHTSCCEEEEEECSC------------H--HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHhCCCCCcEEEEcCC------------c--hhHHHHHHHhhCCcEEEEEe
Confidence 00 12357999987322 1 45777888999999997754
No 407
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=88.10 E-value=6.4 Score=29.07 Aligned_cols=71 Identities=11% Similarity=-0.007 Sum_probs=47.7
Q ss_pred CEEEeCCCCch---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC------CCCCCcccEEEEC
Q 028385 10 DTCRRAAPSIV---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS------FFEDESFDAVIDK 80 (210)
Q Consensus 10 ~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~------~~~~~~fD~Vi~~ 80 (210)
.||=.|++.|. ++..+++.|. +|+.++.++..++...+... .++.++.+|+.+.. ..-.+.+|+++.+
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~ 79 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLS--NNVGYRARDLASHQEVEQLFEQLDSIPSTVVHS 79 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCS--SCCCEEECCTTCHHHHHHHHHSCSSCCSEEEEC
T ss_pred EEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHh--hccCeEeecCCCHHHHHHHHHHHhhcCCEEEEe
Confidence 46777876653 3344455676 79999999988877666542 46788999988743 0123345999887
Q ss_pred Ccc
Q 028385 81 GTL 83 (210)
Q Consensus 81 ~~l 83 (210)
...
T Consensus 80 Ag~ 82 (230)
T 3guy_A 80 AGS 82 (230)
T ss_dssp CCC
T ss_pred CCc
Confidence 654
No 408
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=87.98 E-value=1.6 Score=34.97 Aligned_cols=90 Identities=9% Similarity=0.017 Sum_probs=56.1
Q ss_pred CCEEEeCCC--CchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC------CCCCCcccEEEE
Q 028385 9 RDTCRRAAP--SIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS------FFEDESFDAVID 79 (210)
Q Consensus 9 ~~vLdiGcG--~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~------~~~~~~fD~Vi~ 79 (210)
.+||-.|++ -|.....+++. |..+|+++|.+++-++.+++.... . .+ .|..+.. ....+.+|+|+.
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~-~--~~--~d~~~~~~~~~~~~~~~~~~d~vi~ 236 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF-D--AA--INYKKDNVAEQLRESCPAGVDVYFD 236 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC-S--EE--EETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC-c--eE--EecCchHHHHHHHHhcCCCCCEEEE
Confidence 578989973 35555555554 544899999999888877653321 1 11 2222211 011226999987
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
... ...++...++|+++|+++++.
T Consensus 237 ~~G--------------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 237 NVG--------------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp SCC--------------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCC--------------HHHHHHHHHHhccCcEEEEEC
Confidence 432 145778889999999987654
No 409
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=87.66 E-value=0.9 Score=36.03 Aligned_cols=91 Identities=16% Similarity=0.205 Sum_probs=57.1
Q ss_pred CCEEEeCC-C-CchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEc-cc--CCCCCCCCCcccEEEECCc
Q 028385 9 RDTCRRAA-P-SIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQM-DV--RDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 9 ~~vLdiGc-G-~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~-d~--~~~~~~~~~~fD~Vi~~~~ 82 (210)
.+||-.|+ | -|..+..+++. +. ++++++.+++-++.+++.-. . .++.. +. ........+.+|+|+....
T Consensus 152 ~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa--~--~v~~~~~~~~~~~~~~~~~~~d~vid~~g 226 (330)
T 1tt7_A 152 GSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGA--S--EVISREDVYDGTLKALSKQQWQGAVDPVG 226 (330)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTC--S--EEEEHHHHCSSCCCSSCCCCEEEEEESCC
T ss_pred ceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC--c--EEEECCCchHHHHHHhhcCCccEEEECCc
Confidence 37999997 3 36666666665 65 79999999877777765321 1 11211 11 1111123457999986422
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
. ..+....++|++||+++++..
T Consensus 227 ------------~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 227 ------------G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp ------------T--HHHHHHHTTEEEEEEEEECCC
T ss_pred ------------H--HHHHHHHHhhcCCCEEEEEec
Confidence 1 247788899999999977643
No 410
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.59 E-value=5.2 Score=31.01 Aligned_cols=93 Identities=12% Similarity=0.103 Sum_probs=55.9
Q ss_pred CCEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEE--------cccCCCCCCCC--CcccE
Q 028385 9 RDTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQ--------MDVRDMSFFED--ESFDA 76 (210)
Q Consensus 9 ~~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~--------~d~~~~~~~~~--~~fD~ 76 (210)
++|.=||+|. +.++..+++.+. +|+.+|.+++.++..++.. +.... .+..+...... ...|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 77 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKNG-----LIADFNGEEVVANLPIFSPEEIDHQNEQVDL 77 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHC-----EEEEETTEEEEECCCEECGGGCCTTSCCCSE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhCC-----EEEEeCCCeeEecceeecchhhcccCCCCCE
Confidence 5788899875 234444555566 8999999998877766542 11111 00111110111 26899
Q ss_pred EEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 77 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 77 Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
|+..-. ......+++++...++++..++.+.
T Consensus 78 vi~~v~----------~~~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 78 IIALTK----------AQQLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp EEECSC----------HHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred EEEEec----------cccHHHHHHHHHHhcCCCCEEEEec
Confidence 886422 2456778888888898887765543
No 411
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=87.43 E-value=4.7 Score=31.14 Aligned_cols=84 Identities=12% Similarity=0.133 Sum_probs=53.2
Q ss_pred CCEEEeCC-CC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 9 RDTCRRAA-PS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 9 ~~vLdiGc-G~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
++|.=||+ |. +.++..+.+.+. +|+++|.++..++.+.+. .+.+ .+..+ .-...|+|+..-
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~-----g~~~--~~~~~----~~~~aDvVi~av---- 75 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGM-----GIPL--TDGDG----WIDEADVVVLAL---- 75 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHT-----TCCC--CCSSG----GGGTCSEEEECS----
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhc-----CCCc--CCHHH----HhcCCCEEEEcC----
Confidence 47899998 75 344455556666 899999999887766552 1211 12211 113579998642
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEE
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYM 114 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~ 114 (210)
+......+++++...+++|..++
T Consensus 76 ------~~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 76 ------PDNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp ------CHHHHHHHHHHHGGGSCTTCEEE
T ss_pred ------CchHHHHHHHHHHHhCCCCCEEE
Confidence 22446778888888888887553
No 412
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=87.40 E-value=4.8 Score=26.84 Aligned_cols=91 Identities=13% Similarity=-0.013 Sum_probs=52.6
Q ss_pred CCCEEEeCCCCchhHHHH----HHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC---CCCCCcccEEEEC
Q 028385 8 TRDTCRRAAPSIVMSEDM----VKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS---FFEDESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l----~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~---~~~~~~fD~Vi~~ 80 (210)
.++|+=+|+| .++..+ .+.+. +|+.+|.++..++..++.. ++.++.+|..+.. ...-...|+|+..
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~----~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 76 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEI----DALVINGDCTKIKTLEDAGIEDADMYIAV 76 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC----SSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhc----CcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence 3578888875 444444 34455 8999999998777665432 3556777765421 0113468988865
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
-.- ......+..+.+.+.++ .++..
T Consensus 77 ~~~----------~~~~~~~~~~~~~~~~~-~ii~~ 101 (140)
T 1lss_A 77 TGK----------EEVNLMSSLLAKSYGIN-KTIAR 101 (140)
T ss_dssp CSC----------HHHHHHHHHHHHHTTCC-CEEEE
T ss_pred eCC----------chHHHHHHHHHHHcCCC-EEEEE
Confidence 321 22233455556667775 44333
No 413
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=87.15 E-value=5.6 Score=27.39 Aligned_cols=94 Identities=9% Similarity=0.024 Sum_probs=55.8
Q ss_pred CCCEEEeCCCCchhHHHHHH----cCCCcEEEEeCC-HHHHHHHHHhhcCCCCcEEEEcccCCCC---CCCCCcccEEEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVK----DGYEDIVNIDIS-SVAIDMMKMKYEEIPQLKYLQMDVRDMS---FFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~----~~~~~v~~vD~s-~~~~~~a~~~~~~~~~v~~~~~d~~~~~---~~~~~~fD~Vi~ 79 (210)
..+|+=+|+ |..+..+++ .+. +|+.+|.+ ++..+...+... ..+.++.+|..+.. ...-+..|+|++
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG--DNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC--TTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhc--CCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 457888876 555555443 455 89999997 454444443322 35788999987632 012346888886
Q ss_pred CCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 80 KGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 80 ~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
...- ......+....+.+.|...++..
T Consensus 78 ~~~~----------d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 78 LSDN----------DADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp CSSC----------HHHHHHHHHHHHHHTSSSCEEEE
T ss_pred ecCC----------hHHHHHHHHHHHHHCCCCEEEEE
Confidence 4221 23345555666666677666543
No 414
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=87.11 E-value=4.4 Score=30.68 Aligned_cols=72 Identities=17% Similarity=0.237 Sum_probs=48.8
Q ss_pred CCEEEeCCCCc---hhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCC----C-----CCCcccE
Q 028385 9 RDTCRRAAPSI---VMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF----F-----EDESFDA 76 (210)
Q Consensus 9 ~~vLdiGcG~G---~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~----~-----~~~~fD~ 76 (210)
.++|=.|++.| .++..+++.|. +|+.+|.++...+...+... .++.++.+|+.+... + .-+..|+
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 85 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIG--PAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI 85 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC--CCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45787887655 33445556676 89999999887776665553 457889999887430 0 1236899
Q ss_pred EEECCcc
Q 028385 77 VIDKGTL 83 (210)
Q Consensus 77 Vi~~~~l 83 (210)
++.+...
T Consensus 86 lv~~Ag~ 92 (259)
T 4e6p_A 86 LVNNAAL 92 (259)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9987654
No 415
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=86.87 E-value=2.3 Score=33.55 Aligned_cols=90 Identities=16% Similarity=0.069 Sum_probs=52.8
Q ss_pred CCCEEEeC-CCC-chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCC-CCCCCCCcccEEEECCccc
Q 028385 8 TRDTCRRA-APS-IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD-MSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 8 ~~~vLdiG-cG~-G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~-~~~~~~~~fD~Vi~~~~l~ 84 (210)
..+||=+| +|. |..+..+++.-..+|++++ ++.-.+.+++.-. + .++..+-.+ .. -.-..+|+|+..-.
T Consensus 153 g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa--~--~~i~~~~~~~~~-~~~~g~D~v~d~~g-- 224 (321)
T 3tqh_A 153 GDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGA--E--QCINYHEEDFLL-AISTPVDAVIDLVG-- 224 (321)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTC--S--EEEETTTSCHHH-HCCSCEEEEEESSC--
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCC--C--EEEeCCCcchhh-hhccCCCEEEECCC--
Confidence 34688886 543 7777777776333899888 5554676665422 1 222222111 11 11146999987422
Q ss_pred hhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
. . .+....++|+++|+++.+.
T Consensus 225 ----------~-~-~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 225 ----------G-D-VGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp ----------H-H-HHHHHGGGEEEEEEEEECC
T ss_pred ----------c-H-HHHHHHHhccCCCEEEEeC
Confidence 1 1 2377889999999997653
No 416
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=86.84 E-value=0.23 Score=34.44 Aligned_cols=42 Identities=14% Similarity=0.208 Sum_probs=30.1
Q ss_pred CCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEE
Q 028385 69 FEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYML 115 (210)
Q Consensus 69 ~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~ 115 (210)
++.++||.|+.-..-+. ....-..+++..+.+.|||||.|..
T Consensus 55 Lp~stYD~V~~lt~~~~-----~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 55 LENAKYETVHYLTPEAQ-----TDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCSSSCCSEEEECCCSS-----CSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CCcccccEEEEecCCcc-----chhhcCHHHHHHHHHHhCCCCEEEe
Confidence 78999999986322210 0112238899999999999999975
No 417
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=86.63 E-value=3.4 Score=30.04 Aligned_cols=96 Identities=13% Similarity=0.116 Sum_probs=54.5
Q ss_pred CCEEEeCCCCchhHHHH----HHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccc
Q 028385 9 RDTCRRAAPSIVMSEDM----VKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLD 84 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l----~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~ 84 (210)
++||=.|+ +|.++..+ ++.+. +|++++.++..+.... ++++++.+|+.+...-.-..+|+|+......
T Consensus 1 MkvlVtGa-tG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 1 MKIGIIGA-TGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH------KDINILQKDIFDLTLSDLSDQNVVVDAYGIS 72 (221)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC------SSSEEEECCGGGCCHHHHTTCSEEEECCCSS
T ss_pred CeEEEEcC-CchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc------CCCeEEeccccChhhhhhcCCCEEEECCcCC
Confidence 35777775 44444444 44565 8999999976544322 5789999999875410113579999765442
Q ss_pred hhccCCCchHHHHHHHHHHHHhccC--CcEEEEEE
Q 028385 85 SLMCGTNAPISASQMLGEVSRLLKP--GGIYMLIT 117 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~i~r~Lkp--gG~~~~~~ 117 (210)
.- ..........++.+.++. .+++++++
T Consensus 73 ~~-----~~~~~~~~~~~l~~a~~~~~~~~~v~~S 102 (221)
T 3ew7_A 73 PD-----EAEKHVTSLDHLISVLNGTVSPRLLVVG 102 (221)
T ss_dssp TT-----TTTSHHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred cc-----ccchHHHHHHHHHHHHHhcCCceEEEEe
Confidence 11 112222334444444443 35666654
No 418
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=86.54 E-value=5.2 Score=33.40 Aligned_cols=103 Identities=10% Similarity=0.030 Sum_probs=58.0
Q ss_pred CCEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC---------------CCCcEEEEcccCCCCCCCC
Q 028385 9 RDTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE---------------IPQLKYLQMDVRDMSFFED 71 (210)
Q Consensus 9 ~~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------------~~~v~~~~~d~~~~~~~~~ 71 (210)
++|.=||+|. ..++..+++.|. +|+++|.+++.++..++.... ..++.+ ..|..+. -
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea----~ 76 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQA----V 76 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHH----G
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHH----H
Confidence 5788888875 234444555676 899999999988877663211 012222 1222211 1
Q ss_pred CcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 72 ESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 72 ~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
...|+|+..-.-..-..+.........+++.+.+.|++|-.++..+
T Consensus 77 ~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 77 PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 2468877632111000011122367788899999999887665544
No 419
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=86.23 E-value=5.5 Score=31.63 Aligned_cols=96 Identities=6% Similarity=-0.018 Sum_probs=59.4
Q ss_pred CCCEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc---------CC-C----------CcEEEEcccCC
Q 028385 8 TRDTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE---------EI-P----------QLKYLQMDVRD 65 (210)
Q Consensus 8 ~~~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---------~~-~----------~v~~~~~d~~~ 65 (210)
..+|.=||+|+ +.++..+++.|+ +|++.|.+++.++.++++.. .. + ++++. .|..+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~e 83 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAE 83 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHH
Confidence 34688888875 455566667777 89999999999988865421 10 1 23332 22221
Q ss_pred CCCCCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 66 MSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 66 ~~~~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
. -..-|+|+..-.- .......+++++...++|+..+...+
T Consensus 84 a----v~~aDlVieavpe--------~~~~k~~v~~~l~~~~~~~~Ii~s~t 123 (319)
T 2dpo_A 84 A----VEGVVHIQECVPE--------NLDLKRKIFAQLDSIVDDRVVLSSSS 123 (319)
T ss_dssp H----TTTEEEEEECCCS--------CHHHHHHHHHHHHTTCCSSSEEEECC
T ss_pred H----HhcCCEEEEeccC--------CHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 1 1346888854221 12345678899999999988765433
No 420
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=86.15 E-value=7.2 Score=29.79 Aligned_cols=85 Identities=8% Similarity=0.025 Sum_probs=52.4
Q ss_pred CEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchhc
Q 028385 10 DTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSLM 87 (210)
Q Consensus 10 ~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~~ 87 (210)
+|.=||||. +.++..+.+.+. +|+++|.+++.++.+.+.- .. .. ...|... . ...|+|+..-
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g--~~-~~-~~~~~~~---~--~~~D~vi~av------ 65 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQ--LV-DE-AGQDLSL---L--QTAKIIFLCT------ 65 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTT--SC-SE-EESCGGG---G--TTCSEEEECS------
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCC--CC-cc-ccCCHHH---h--CCCCEEEEEC------
Confidence 577788875 234444555566 8999999998877765321 11 11 1222221 2 4679988642
Q ss_pred cCCCchHHHHHHHHHHHHhccCCcEEE
Q 028385 88 CGTNAPISASQMLGEVSRLLKPGGIYM 114 (210)
Q Consensus 88 ~~~~~~~~~~~~l~~i~r~LkpgG~~~ 114 (210)
+......+++++...++++..++
T Consensus 66 ----~~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 66 ----PIQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp ----CHHHHHHHHHHHGGGSCTTCEEE
T ss_pred ----CHHHHHHHHHHHHhhCCCCCEEE
Confidence 22456778888888888887664
No 421
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=86.00 E-value=4.9 Score=31.15 Aligned_cols=108 Identities=13% Similarity=0.057 Sum_probs=62.8
Q ss_pred CCEEEeCCCCch---hHHHHHHcCCCcEEEEeCCHH-HHHHHHHhhcC-CCCcEEEEcccCCCCC----C-----CCCcc
Q 028385 9 RDTCRRAAPSIV---MSEDMVKDGYEDIVNIDISSV-AIDMMKMKYEE-IPQLKYLQMDVRDMSF----F-----EDESF 74 (210)
Q Consensus 9 ~~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~s~~-~~~~a~~~~~~-~~~v~~~~~d~~~~~~----~-----~~~~f 74 (210)
..+|=.|++.|. ++..+++.|. +|+.++.++. ..+...+..+. ..++.++.+|+.+... + .-+..
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 126 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSL 126 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 357878876653 3344555676 8999998764 33333333322 2578899999987430 0 01368
Q ss_pred cEEEECCccchh--ccCCCchHH-----------HHHHHHHHHHhccCCcEEEEEE
Q 028385 75 DAVIDKGTLDSL--MCGTNAPIS-----------ASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 75 D~Vi~~~~l~~~--~~~~~~~~~-----------~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
|+++.+...... .....+.++ ...+++.+.+.|+.+|.++.++
T Consensus 127 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 127 NILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp CEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 999987543211 011112222 2345667777888889887765
No 422
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=85.92 E-value=9.2 Score=29.32 Aligned_cols=106 Identities=15% Similarity=0.073 Sum_probs=62.6
Q ss_pred CCEEEeCCCCch---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCC----C-----CCCcccE
Q 028385 9 RDTCRRAAPSIV---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF----F-----EDESFDA 76 (210)
Q Consensus 9 ~~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~----~-----~~~~fD~ 76 (210)
..+|=.|++.|. ++..+++.|. +|+.+|.++..++...+... .++.++.+|+.+... + .-+..|+
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 104 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIG--SKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV 104 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 357777876653 3444555676 89999999887776655442 467888999887430 0 0136899
Q ss_pred EEECCccchhc-cCCCchHHHH-----------HHHHHHHHhccC--CcEEEEEE
Q 028385 77 VIDKGTLDSLM-CGTNAPISAS-----------QMLGEVSRLLKP--GGIYMLIT 117 (210)
Q Consensus 77 Vi~~~~l~~~~-~~~~~~~~~~-----------~~l~~i~r~Lkp--gG~~~~~~ 117 (210)
++.+....... +...+.++.. .+.+.+.+.++. +|.++.++
T Consensus 105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~is 159 (277)
T 4dqx_A 105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTT 159 (277)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEEC
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEC
Confidence 99876643221 1122233333 334455566644 46776654
No 423
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=85.91 E-value=0.53 Score=36.91 Aligned_cols=88 Identities=13% Similarity=0.097 Sum_probs=55.1
Q ss_pred CCCEEEeCC--CCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEccc-CCCC-CCCCCcccEEEECCc
Q 028385 8 TRDTCRRAA--PSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDV-RDMS-FFEDESFDAVIDKGT 82 (210)
Q Consensus 8 ~~~vLdiGc--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~-~~~~-~~~~~~fD~Vi~~~~ 82 (210)
..+||-+|+ |.|..+..+++. +. +|+++|.++...+.+++.-. . .++..+- .+.. .. +.+|+|+. ..
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga--~--~~~~~~~~~~~~~~~--~~~d~vid-~g 197 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGA--E--EAATYAEVPERAKAW--GGLDLVLE-VR 197 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTC--S--EEEEGGGHHHHHHHT--TSEEEEEE-CS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCC--C--EEEECCcchhHHHHh--cCceEEEE-CC
Confidence 357999997 336666666665 55 89999999888877765321 1 1222111 1111 02 46999986 33
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
- ..++...++|+++|+++.+.
T Consensus 198 ~--------------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 198 G--------------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp C--------------TTHHHHHTTEEEEEEEEEC-
T ss_pred H--------------HHHHHHHHhhccCCEEEEEe
Confidence 1 13677889999999987654
No 424
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=85.45 E-value=6.1 Score=30.52 Aligned_cols=95 Identities=15% Similarity=0.190 Sum_probs=58.2
Q ss_pred CCEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-----------C---------CCcEEEEcccCCC
Q 028385 9 RDTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-----------I---------PQLKYLQMDVRDM 66 (210)
Q Consensus 9 ~~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-----------~---------~~v~~~~~d~~~~ 66 (210)
.+|.=||+|+ +.++..+++.+. +|+..|.+++.++.+++.... . .++.+ ..|..+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 4677888875 334444555676 899999999998888765210 0 11222 2232221
Q ss_pred CCCCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 67 SFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 67 ~~~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
-...|+|+..-.- .......+++++...++++..++..+
T Consensus 83 ----~~~aDlVi~av~~--------~~~~~~~v~~~l~~~~~~~~il~s~t 121 (283)
T 4e12_A 83 ----VKDADLVIEAVPE--------SLDLKRDIYTKLGELAPAKTIFATNS 121 (283)
T ss_dssp ----TTTCSEEEECCCS--------CHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred ----hccCCEEEEeccC--------cHHHHHHHHHHHHhhCCCCcEEEECC
Confidence 1346988864221 12466788899999999988764333
No 425
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=85.41 E-value=7.9 Score=28.15 Aligned_cols=98 Identities=13% Similarity=0.094 Sum_probs=57.2
Q ss_pred CEEEeCCCCchhHHHHH----HcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 10 DTCRRAAPSIVMSEDMV----KDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 10 ~vLdiGcG~G~~~~~l~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
+||=.|+ +|.++..++ +.+. +|++++.++..+.... ..+++++.+|+.+.....-+.+|+|+......+
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~ 74 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRL-----GATVATLVKEPLVLTEADLDSVDAVVDALSVPW 74 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHT-----CTTSEEEECCGGGCCHHHHTTCSEEEECCCCCT
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCC-EEEEEEeccccccccc-----CCCceEEecccccccHhhcccCCEEEECCccCC
Confidence 5777775 455554444 4466 8999999987654321 157899999998754101135799998665421
Q ss_pred hccCCCchHHHHHHHHHHHHhccC-CcEEEEEE
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKP-GGIYMLIT 117 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~Lkp-gG~~~~~~ 117 (210)
.......-.....++.+.++. |+++++++
T Consensus 75 ---~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 75 ---GSGRGYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp ---TSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred ---CcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 111122333444556666543 46666654
No 426
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=85.16 E-value=2.2 Score=32.37 Aligned_cols=107 Identities=15% Similarity=0.063 Sum_probs=58.4
Q ss_pred CCEEEeCCCCchhHHHH----HHcCCCcEEEEeC-CHHHHHHHHHhhcC-CCCcEEEEcccCCCCC----CC-----CCc
Q 028385 9 RDTCRRAAPSIVMSEDM----VKDGYEDIVNIDI-SSVAIDMMKMKYEE-IPQLKYLQMDVRDMSF----FE-----DES 73 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l----~~~~~~~v~~vD~-s~~~~~~a~~~~~~-~~~v~~~~~d~~~~~~----~~-----~~~ 73 (210)
.+||=.|++ |.++..+ ++.|. +|+.++. ++...+...+.... ..++.++.+|+.+... +. -+.
T Consensus 22 k~vlItGas-ggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 99 (274)
T 1ja9_A 22 KVALTTGAG-RGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 99 (274)
T ss_dssp CEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 357767754 4444444 44566 8999998 77666554443321 2567889999887430 10 136
Q ss_pred ccEEEECCccchhc-cCCCchHHHH-----------HHHHHHHHhccCCcEEEEEE
Q 028385 74 FDAVIDKGTLDSLM-CGTNAPISAS-----------QMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 74 fD~Vi~~~~l~~~~-~~~~~~~~~~-----------~~l~~i~r~LkpgG~~~~~~ 117 (210)
.|+|+.+....... ....+.++.. .+++.+.+.++.+|.++.++
T Consensus 100 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~s 155 (274)
T 1ja9_A 100 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS 155 (274)
T ss_dssp EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEc
Confidence 89998765432210 0011222222 33444455665568877654
No 427
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=85.15 E-value=3 Score=33.01 Aligned_cols=102 Identities=6% Similarity=0.055 Sum_probs=57.8
Q ss_pred CCCCCEEEeCCCCchhHHHHH----HcCCCcEEEEeCCH----HHHHHHHHhhcCCCCcEEEEcccCCCC----CCCCCc
Q 028385 6 TGTRDTCRRAAPSIVMSEDMV----KDGYEDIVNIDISS----VAIDMMKMKYEEIPQLKYLQMDVRDMS----FFEDES 73 (210)
Q Consensus 6 ~~~~~vLdiGcG~G~~~~~l~----~~~~~~v~~vD~s~----~~~~~a~~~~~~~~~v~~~~~d~~~~~----~~~~~~ 73 (210)
+...+||=.|+ +|.++..++ +.+. +|++++.++ ...+....... .+++++.+|+.+.. .+....
T Consensus 8 M~~~~IlVtGa-tG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~~~ 83 (346)
T 3i6i_A 8 SPKGRVLIAGA-TGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALED--KGAIIVYGLINEQEAMEKILKEHE 83 (346)
T ss_dssp ---CCEEEECT-TSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHHHHTT
T ss_pred CCCCeEEEECC-CcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHh--CCcEEEEeecCCHHHHHHHHhhCC
Confidence 34468998886 555555554 4465 899998865 33332222111 56899999998743 122236
Q ss_pred ccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 74 FDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 74 fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
.|+|+.......+ .....+++.+.+. ..-.+++...++
T Consensus 84 ~d~Vi~~a~~~n~-------~~~~~l~~aa~~~-g~v~~~v~S~~g 121 (346)
T 3i6i_A 84 IDIVVSTVGGESI-------LDQIALVKAMKAV-GTIKRFLPSEFG 121 (346)
T ss_dssp CCEEEECCCGGGG-------GGHHHHHHHHHHH-CCCSEEECSCCS
T ss_pred CCEEEECCchhhH-------HHHHHHHHHHHHc-CCceEEeecccC
Confidence 8999987665444 4445555555443 112356554444
No 428
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=85.10 E-value=4.1 Score=33.69 Aligned_cols=93 Identities=13% Similarity=-0.014 Sum_probs=56.9
Q ss_pred CCCCEEEeCC-C-CchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCC------------------
Q 028385 7 GTRDTCRRAA-P-SIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDM------------------ 66 (210)
Q Consensus 7 ~~~~vLdiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~------------------ 66 (210)
...+||=.|+ | -|..+..+++....++++++.++.-++.+++.-.. . ++...-.+.
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~---~-~i~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCD---L-VINRAELGITDDIADDPRRVVETGRKL 295 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC---C-EEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC---E-EEecccccccccccccccccchhhhHH
Confidence 3456898987 3 36666666665334899999999988888653221 1 111110110
Q ss_pred ----CCCCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 67 ----SFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 67 ----~~~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.......+|+|+.... . ..++...++|++||.++.+.
T Consensus 296 ~~~v~~~~g~g~Dvvid~~G------------~--~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 296 AKLVVEKAGREPDIVFEHTG------------R--VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHSSCCSEEEECSC------------H--HHHHHHHHHSCTTCEEEESC
T ss_pred HHHHHHHhCCCceEEEECCC------------c--hHHHHHHHHHhcCCEEEEEe
Confidence 0001346999997432 1 24677788999999997754
No 429
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=84.98 E-value=1.6 Score=33.18 Aligned_cols=106 Identities=9% Similarity=0.037 Sum_probs=58.9
Q ss_pred CCCEEEeCCC-CchhHHH----HHHcCCCcEEEEeCCHH---HHHHHHHhhcCCCCcEEEEcccCCCCC----CC-----
Q 028385 8 TRDTCRRAAP-SIVMSED----MVKDGYEDIVNIDISSV---AIDMMKMKYEEIPQLKYLQMDVRDMSF----FE----- 70 (210)
Q Consensus 8 ~~~vLdiGcG-~G~~~~~----l~~~~~~~v~~vD~s~~---~~~~a~~~~~~~~~v~~~~~d~~~~~~----~~----- 70 (210)
..++|=.|++ +|.++.. +++.|. +|+.++.++. .++...+.. ..+.++.+|+.+... +.
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEAL---GGALLFRADVTQDEELDALFAGVKEA 83 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHT---TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHHHHHHH
Confidence 3468888876 2444444 444576 7999998875 222222222 347888999887430 00
Q ss_pred CCcccEEEECCccchh-----ccCCCchHHHH-----------HHHHHHHHhccCCcEEEEEE
Q 028385 71 DESFDAVIDKGTLDSL-----MCGTNAPISAS-----------QMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 71 ~~~fD~Vi~~~~l~~~-----~~~~~~~~~~~-----------~~l~~i~r~LkpgG~~~~~~ 117 (210)
-+..|+++.+...... .+...+.++.. .+++.+.+.++.+|.++.++
T Consensus 84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 146 (261)
T 2wyu_A 84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLT 146 (261)
T ss_dssp HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEE
T ss_pred cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 1368999987654321 01111223332 34455556666578877765
No 430
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=84.96 E-value=12 Score=30.29 Aligned_cols=95 Identities=11% Similarity=-0.011 Sum_probs=62.0
Q ss_pred CCCEEEeCCCCchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CCC--CcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 8 TRDTCRRAAPSIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EIP--QLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~--~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
..+||.++.+.|.++..++.. .++.+.-|-......+.+.. ..+ ++++... +. -....||+|+....
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~----~~-~~~~~~~~v~~~lp- 109 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFLDS----TA-DYPQQPGVVLIKVP- 109 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET----TS-CCCSSCSEEEEECC-
T ss_pred CCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc----cc-ccccCCCEEEEEcC-
Confidence 358999999999999888654 34455335444444444442 222 3555422 22 23467999986433
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
+........+.++...|++|+.+++..-
T Consensus 110 -------k~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 110 -------KTLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp -------SCHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred -------CCHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 3447788899999999999999977653
No 431
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=84.90 E-value=4.2 Score=31.60 Aligned_cols=57 Identities=21% Similarity=0.345 Sum_probs=37.0
Q ss_pred CcccEEEEC----CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCchhhHhhh
Q 028385 72 ESFDAVIDK----GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPKARMIHL 128 (210)
Q Consensus 72 ~~fD~Vi~~----~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~~~~~~~ 128 (210)
+.||+|+.+ +-.||..-+++.-....-+-....+.|+|||.+++..|+-.+...+.+
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~v 270 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERV 270 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHH
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHH
Confidence 789999986 334444111111134555667778899999999999998655444433
No 432
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=84.83 E-value=5.2 Score=31.22 Aligned_cols=95 Identities=16% Similarity=0.120 Sum_probs=56.5
Q ss_pred CCEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 9 RDTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 9 ~~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
++|.=||+|. +.++..+++.+. +|++.|.+++.++.+.+.- ......+..+. -...|+|+..-.-
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g-----~~~~~~~~~e~----~~~aDvvi~~vp~--- 74 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEG-----ACGAAASAREF----AGVVDALVILVVN--- 74 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTT-----CSEEESSSTTT----TTTCSEEEECCSS---
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcC-----CccccCCHHHH----HhcCCEEEEECCC---
Confidence 5788888875 334445555676 8999999998887766541 22223333332 1346988864221
Q ss_pred ccCCCchHHHHHHH---HHHHHhccCCcEEEEEEcCCch
Q 028385 87 MCGTNAPISASQML---GEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 87 ~~~~~~~~~~~~~l---~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
......++ +++...+++|..++-.+-..|.
T Consensus 75 ------~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~ 107 (303)
T 3g0o_A 75 ------AAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSA 107 (303)
T ss_dssp ------HHHHHHHHC--CCCGGGSCTTCEEEECSCCCHH
T ss_pred ------HHHHHHHHhChhhHHhhCCCCCEEEecCCCCHH
Confidence 12344555 6667788888877544433443
No 433
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=84.71 E-value=2.5 Score=32.97 Aligned_cols=94 Identities=14% Similarity=0.058 Sum_probs=57.5
Q ss_pred CCCEEEeCCCC-c-hhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 8 TRDTCRRAAPS-I-VMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 8 ~~~vLdiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
..+|.=||+|. | .++..+++.+. +|++.|.+++.++.+.+. .+.+ ..|..+.. . .|+|+..-.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~-----g~~~-~~~~~~~~----~-aDvvi~~vp--- 79 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEA-----GATL-ADSVADVA----A-ADLIHITVL--- 79 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHT-----TCEE-CSSHHHHT----T-SSEEEECCS---
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHC-----CCEE-cCCHHHHH----h-CCEEEEECC---
Confidence 35799999876 3 34444445566 899999999877766543 2222 12222221 2 698886422
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
.......+++++...+++|..++-.+-..|.
T Consensus 80 ------~~~~~~~v~~~l~~~l~~g~ivv~~st~~~~ 110 (296)
T 3qha_A 80 ------DDAQVREVVGELAGHAKPGTVIAIHSTISDT 110 (296)
T ss_dssp ------SHHHHHHHHHHHHTTCCTTCEEEECSCCCHH
T ss_pred ------ChHHHHHHHHHHHHhcCCCCEEEEeCCCCHH
Confidence 1235567788899999988877554433444
No 434
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=84.68 E-value=0.56 Score=38.16 Aligned_cols=98 Identities=9% Similarity=0.137 Sum_probs=52.4
Q ss_pred CCCEEEeCCCCchhHHHHHH----cCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 8 TRDTCRRAAPSIVMSEDMVK----DGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~----~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
..+|+=+|+| ..+..+++ .|. +|+++|.++..++.+++.... .+.....+..++. -.-...|+|+.....
T Consensus 166 ~~~V~ViGaG--~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~--~~~~~~~~~~~l~-~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 166 PASVVILGGG--TVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGG--RVITLTATEANIK-KSVQHADLLIGAVLV 239 (369)
T ss_dssp CCEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT--SEEEEECCHHHHH-HHHHHCSEEEECCC-
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCc--eEEEecCCHHHHH-HHHhCCCEEEECCCC
Confidence 3578999985 44433332 365 899999999888777654321 1211111111111 001258999875432
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
... ....-+.++..+.||+||.++.+..
T Consensus 240 ~~~-------~~~~li~~~~l~~mk~gg~iV~v~~ 267 (369)
T 2eez_A 240 PGA-------KAPKLVTRDMLSLMKEGAVIVDVAV 267 (369)
T ss_dssp -------------CCSCHHHHTTSCTTCEEEECC-
T ss_pred Ccc-------ccchhHHHHHHHhhcCCCEEEEEec
Confidence 210 1111124667788899998866543
No 435
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=84.34 E-value=2.4 Score=33.93 Aligned_cols=91 Identities=9% Similarity=0.052 Sum_probs=56.6
Q ss_pred CCCEEEeCC-C-CchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC----CCCCCcccEEEEC
Q 028385 8 TRDTCRRAA-P-SIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----FFEDESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiGc-G-~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~----~~~~~~fD~Vi~~ 80 (210)
..+||-.|+ | -|..+..+++. |. +|+++|.+++-++.+++.-.. .++..+-.+.. ....+.+|+|+..
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~----~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 242 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAK----RGINYRSEDFAAVIKAETGQGVDIILDM 242 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCS----EEEETTTSCHHHHHHHHHSSCEEEEEES
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCC----EEEeCCchHHHHHHHHHhCCCceEEEEC
Confidence 346888853 2 36666666665 55 899999999998888764321 12221111110 0113569999975
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
..- ..+....+.|+++|.++.+.
T Consensus 243 ~g~--------------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 243 IGA--------------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp CCG--------------GGHHHHHHTEEEEEEEEECC
T ss_pred CCH--------------HHHHHHHHHhccCCEEEEEE
Confidence 331 14667788999999987764
No 436
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=84.30 E-value=6.3 Score=30.17 Aligned_cols=108 Identities=11% Similarity=0.112 Sum_probs=62.9
Q ss_pred CCEEEeCCCCch---hHHHHHHcCCCcEEEEeCC-HHHHHHHHHhhc-CCCCcEEEEcccCCCCC----C-----CCCcc
Q 028385 9 RDTCRRAAPSIV---MSEDMVKDGYEDIVNIDIS-SVAIDMMKMKYE-EIPQLKYLQMDVRDMSF----F-----EDESF 74 (210)
Q Consensus 9 ~~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~s-~~~~~~a~~~~~-~~~~v~~~~~d~~~~~~----~-----~~~~f 74 (210)
..+|=.|++.|. ++..+++.|. +|+.++.. ....+...+... ...++.++.+|+.+... + .-+..
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 110 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGL 110 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 457878877653 3445556676 78888654 454444444332 22568889999887430 0 01368
Q ss_pred cEEEECCccchhc-cCCCchHH-----------HHHHHHHHHHhccCCcEEEEEE
Q 028385 75 DAVIDKGTLDSLM-CGTNAPIS-----------ASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 75 D~Vi~~~~l~~~~-~~~~~~~~-----------~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
|+++.+....... +...+.++ ...+++.+.+.|+++|.++.++
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 111 DILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 9999876542210 11112222 3345677778888889887764
No 437
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=84.17 E-value=3.1 Score=35.10 Aligned_cols=106 Identities=14% Similarity=0.100 Sum_probs=60.9
Q ss_pred CCCCCEEEeCCCC-c-hhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CC-------------cEEEEcccCCCCC
Q 028385 6 TGTRDTCRRAAPS-I-VMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQ-------------LKYLQMDVRDMSF 68 (210)
Q Consensus 6 ~~~~~vLdiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~-------------v~~~~~d~~~~~~ 68 (210)
-+.++|.=||+|. | .++..+++.|. +|+++|.+++.++..++..... +. +.+ ..|....
T Consensus 6 ~~~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a-- 81 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAA-- 81 (478)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHH--
T ss_pred CCCceEEEECcCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHH--
Confidence 4668899999985 3 44555666677 8999999999888877642100 11 221 1121110
Q ss_pred CCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 69 FEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 69 ~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
-...|+|+..-.--.-..+.........+++.+.+.|++|..++..+
T Consensus 82 --~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S 128 (478)
T 2y0c_A 82 --VAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS 128 (478)
T ss_dssp --HHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred --hhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 12368777532110000011122567888889999999887665443
No 438
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=84.08 E-value=4.5 Score=30.88 Aligned_cols=109 Identities=13% Similarity=0.084 Sum_probs=63.2
Q ss_pred CCEEEeCCCCch---hHHHHHHcCCCcEEEEeC-CHHHHHHHHHhhcC-CCCcEEEEcccCCCCC----C-----CCCcc
Q 028385 9 RDTCRRAAPSIV---MSEDMVKDGYEDIVNIDI-SSVAIDMMKMKYEE-IPQLKYLQMDVRDMSF----F-----EDESF 74 (210)
Q Consensus 9 ~~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~-s~~~~~~a~~~~~~-~~~v~~~~~d~~~~~~----~-----~~~~f 74 (210)
..+|=.|++.|. ++..+++.|. +|+.++. +....+...+.... ..++.++.+|+.+... + .-+..
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 97 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHL 97 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 356777766553 3444555676 7888775 45555544444322 2578899999987430 0 01368
Q ss_pred cEEEECCccchhc-cCCCchHH-----------HHHHHHHHHHhccCCcEEEEEEc
Q 028385 75 DAVIDKGTLDSLM-CGTNAPIS-----------ASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 75 D~Vi~~~~l~~~~-~~~~~~~~-----------~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
|+++.+....... +...+.++ ...+.+.+.+.++++|.++.++-
T Consensus 98 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 98 DIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp CEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 9999876543210 11112222 23456677788888998877653
No 439
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=83.44 E-value=3.8 Score=31.81 Aligned_cols=108 Identities=15% Similarity=0.059 Sum_probs=62.3
Q ss_pred CCEEEeCCCCch---hHHHHHHcCCCcEEEEeCC--HHHHHHHHHhhc-CCCCcEEEEcccCCCCC----C-----CCCc
Q 028385 9 RDTCRRAAPSIV---MSEDMVKDGYEDIVNIDIS--SVAIDMMKMKYE-EIPQLKYLQMDVRDMSF----F-----EDES 73 (210)
Q Consensus 9 ~~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~s--~~~~~~a~~~~~-~~~~v~~~~~d~~~~~~----~-----~~~~ 73 (210)
..+|=.|++.|. ++..+++.|. +|+.++.+ ....+...+... ...++.++.+|+.+... + .-+.
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 128 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGG 128 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 357878876552 3344555676 79998886 333443333332 22568888899887430 0 0146
Q ss_pred ccEEEECCccchh--ccCCCchHH-----------HHHHHHHHHHhccCCcEEEEEE
Q 028385 74 FDAVIDKGTLDSL--MCGTNAPIS-----------ASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 74 fD~Vi~~~~l~~~--~~~~~~~~~-----------~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.|+++.+...... .+...+.++ ...+++.+.+.++.+|.++.++
T Consensus 129 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 129 LDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 8999987664221 011112222 2345667777888889887765
No 440
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=83.44 E-value=3.9 Score=32.46 Aligned_cols=94 Identities=11% Similarity=0.148 Sum_probs=55.3
Q ss_pred CCCEEEeCCCC-c-hhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc----C--CC---CcEEEEcccCCCCCCCCCcccE
Q 028385 8 TRDTCRRAAPS-I-VMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE----E--IP---QLKYLQMDVRDMSFFEDESFDA 76 (210)
Q Consensus 8 ~~~vLdiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~--~~---~v~~~~~d~~~~~~~~~~~fD~ 76 (210)
.++|.=||+|. | .++..+++.+. +|+.+|.+++.++..++... . .. ++.....|..+. -...|+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~D~ 78 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA----VKDADV 78 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH----HTTCSE
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH----HhcCCE
Confidence 36899999875 2 34444555565 79999999988877765521 0 00 000011111110 135798
Q ss_pred EEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 77 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 77 Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
|+..-.- .....+++.+...+++|..++..
T Consensus 79 vi~~v~~----------~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 79 ILIVVPA----------IHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EEECSCG----------GGHHHHHHHHGGGCCTTCEEEES
T ss_pred EEEeCCc----------hHHHHHHHHHHHhCCCCCEEEEc
Confidence 8864332 33467788888889988766444
No 441
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=83.41 E-value=1.3 Score=37.18 Aligned_cols=65 Identities=12% Similarity=0.139 Sum_probs=46.6
Q ss_pred CCCEEEeCCCCchhHHHHHHc----CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC---CCCCCcccEEEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD----GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS---FFEDESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~----~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~---~~~~~~fD~Vi~ 79 (210)
.++|+=+||| ..+..+++. +. +|+.+|.+++.++.+.+++ .+.++.+|+.+.. ...-+..|++++
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~-~v~vId~d~~~~~~~~~~~----~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENN-DITIVDKDGDRLRELQDKY----DLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTE-EEEEEESCHHHHHHHHHHS----SCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHhc----CcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 4678887776 455555543 44 7999999999999887764 4788999998843 122356888886
No 442
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=83.32 E-value=3.9 Score=28.32 Aligned_cols=95 Identities=11% Similarity=-0.068 Sum_probs=50.7
Q ss_pred CCCCEEEeCCCC-chhH-HHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC---CCCCCcccEEEECC
Q 028385 7 GTRDTCRRAAPS-IVMS-EDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS---FFEDESFDAVIDKG 81 (210)
Q Consensus 7 ~~~~vLdiGcG~-G~~~-~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~---~~~~~~fD~Vi~~~ 81 (210)
...+|+=+|+|. |... ..+.+.+. +|+++|.++..++.+++ ...+.++.+|..+.. ...-..+|+|+..-
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~----~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~ 92 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNS----EFSGFTVVGDAAEFETLKECGMEKADMVFAFT 92 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCT----TCCSEEEESCTTSHHHHHTTTGGGCSEEEECS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHh----cCCCcEEEecCCCHHHHHHcCcccCCEEEEEe
Confidence 345789998864 3222 22333465 89999999865443321 124556667754421 01124689888642
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
.- ......+..+.+.+.+...++..
T Consensus 93 ~~----------~~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 93 ND----------DSTNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp SC----------HHHHHHHHHHHHHTSCCSEEEEE
T ss_pred CC----------cHHHHHHHHHHHHHCCCCeEEEE
Confidence 21 23334444455555555555443
No 443
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=83.30 E-value=13 Score=28.14 Aligned_cols=95 Identities=8% Similarity=0.087 Sum_probs=57.6
Q ss_pred CCCEEEeCCCC-c-hhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 8 TRDTCRRAAPS-I-VMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 8 ~~~vLdiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
.++|.=||+|. | .++..+.+.+...|+.+|.+++..+...+.. ++.+ ..|..+.- ...|+|+..-.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~----g~~~-~~~~~~~~----~~~Dvvi~av~--- 77 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV----EAEY-TTDLAEVN----PYAKLYIVSLK--- 77 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT----TCEE-ESCGGGSC----SCCSEEEECCC---
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc----CCce-eCCHHHHh----cCCCEEEEecC---
Confidence 35899999874 2 3334444556633899999998887766553 2322 22332221 25799886422
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
......+++++...+++|..++..+-+.+
T Consensus 78 -------~~~~~~v~~~l~~~~~~~~ivv~~s~~~~ 106 (266)
T 3d1l_A 78 -------DSAFAELLQGIVEGKREEALMVHTAGSIP 106 (266)
T ss_dssp -------HHHHHHHHHHHHTTCCTTCEEEECCTTSC
T ss_pred -------HHHHHHHHHHHHhhcCCCcEEEECCCCCc
Confidence 23457777888888888876655443334
No 444
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=83.13 E-value=12 Score=28.48 Aligned_cols=89 Identities=11% Similarity=0.038 Sum_probs=52.5
Q ss_pred CEEEeCCCC--chhHHHHHHcCC-CcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCC-cccEEEECCccch
Q 028385 10 DTCRRAAPS--IVMSEDMVKDGY-EDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDE-SFDAVIDKGTLDS 85 (210)
Q Consensus 10 ~vLdiGcG~--G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~-~fD~Vi~~~~l~~ 85 (210)
+|.=||+|. +.++..+.+.+. .+|+++|.++..++.+++.-. ......|.... . . ..|+|+..-
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~----~~~~~~~~~~~--~--~~~aDvVilav---- 70 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI----IDEGTTSIAKV--E--DFSPDFVMLSS---- 70 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS----CSEEESCGGGG--G--GTCCSEEEECS----
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCC----cccccCCHHHH--h--cCCCCEEEEcC----
Confidence 577788775 233344444453 269999999988877654311 10112222221 1 2 579988642
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
+......++.++...++++..++.+
T Consensus 71 ------p~~~~~~v~~~l~~~l~~~~iv~~~ 95 (281)
T 2g5c_A 71 ------PVRTFREIAKKLSYILSEDATVTDQ 95 (281)
T ss_dssp ------CHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred ------CHHHHHHHHHHHHhhCCCCcEEEEC
Confidence 2245567788888889998866443
No 445
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=83.02 E-value=7.6 Score=29.83 Aligned_cols=73 Identities=14% Similarity=0.243 Sum_probs=46.6
Q ss_pred CEEEeCCCCch---hHHHHHHcCCCcEEEEeC-CHHHHHHHHHhhc-CCCCcEEEEcccCCCCCC---------CCCccc
Q 028385 10 DTCRRAAPSIV---MSEDMVKDGYEDIVNIDI-SSVAIDMMKMKYE-EIPQLKYLQMDVRDMSFF---------EDESFD 75 (210)
Q Consensus 10 ~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~-s~~~~~~a~~~~~-~~~~v~~~~~d~~~~~~~---------~~~~fD 75 (210)
.+|=.|++.|. ++..+++.|. +|+.+|. ++..++...+... ...++.++.+|+.+.... .-+..|
T Consensus 31 ~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 109 (280)
T 4da9_A 31 VAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRID 109 (280)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCC
T ss_pred EEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 47777776653 3444555676 8999985 6666665544442 225788999999885410 013689
Q ss_pred EEEECCcc
Q 028385 76 AVIDKGTL 83 (210)
Q Consensus 76 ~Vi~~~~l 83 (210)
+++.+...
T Consensus 110 ~lvnnAg~ 117 (280)
T 4da9_A 110 CLVNNAGI 117 (280)
T ss_dssp EEEEECC-
T ss_pred EEEECCCc
Confidence 99987655
No 446
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=82.95 E-value=2.7 Score=33.94 Aligned_cols=94 Identities=10% Similarity=0.030 Sum_probs=53.2
Q ss_pred CCCCEEEeCC-C-CchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-C-CCCCcccEEEECCc
Q 028385 7 GTRDTCRRAA-P-SIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-F-FEDESFDAVIDKGT 82 (210)
Q Consensus 7 ~~~~vLdiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-~-~~~~~fD~Vi~~~~ 82 (210)
...+||=.|+ | -|..+..+++....+|++++ ++.-.+.+++.-. . .++..+-.+.. . .....+|+|+....
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa--~--~v~~~~~~~~~~~~~~~~g~D~vid~~g 257 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGA--D--DVIDYKSGSVEEQLKSLKPFDFILDNVG 257 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTC--S--EEEETTSSCHHHHHHTSCCBSEEEESSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCC--C--EEEECCchHHHHHHhhcCCCCEEEECCC
Confidence 3457999984 4 36667777765333899998 6666666654321 1 12211111110 0 01246999997432
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
- ....+....++|++||+++.+.
T Consensus 258 ~------------~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 258 G------------STETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp T------------THHHHGGGGBCSSSCCEEEESC
T ss_pred C------------hhhhhHHHHHhhcCCcEEEEeC
Confidence 1 1123566778899999986654
No 447
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=82.93 E-value=7.2 Score=29.41 Aligned_cols=73 Identities=10% Similarity=0.002 Sum_probs=45.6
Q ss_pred CCEEEeCCCCchhHHHH----HHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCcEEEEcccCCCCC----CC------CCc
Q 028385 9 RDTCRRAAPSIVMSEDM----VKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSF----FE------DES 73 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l----~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~v~~~~~d~~~~~~----~~------~~~ 73 (210)
.+||=.|++. .++..+ ++.+. +|+.++.++..++...+.... ..++.++.+|+.+... +. .+.
T Consensus 15 k~vlITGasg-giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 92 (266)
T 1xq1_A 15 KTVLVTGGTK-GIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 92 (266)
T ss_dssp CEEEETTTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 3567666644 444444 44566 899999998766655444321 2467888999887420 10 156
Q ss_pred ccEEEECCcc
Q 028385 74 FDAVIDKGTL 83 (210)
Q Consensus 74 fD~Vi~~~~l 83 (210)
.|+|+.+...
T Consensus 93 id~li~~Ag~ 102 (266)
T 1xq1_A 93 LDILINNLGA 102 (266)
T ss_dssp CSEEEEECCC
T ss_pred CcEEEECCCC
Confidence 8999886554
No 448
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=82.91 E-value=13 Score=28.01 Aligned_cols=105 Identities=12% Similarity=0.103 Sum_probs=57.7
Q ss_pred CCEEEeCCCC-chhHHH----HHHcCCCcEEEEeCCH---HHHHHHHHhhcCCCCcEEEEcccCCCCC---------CCC
Q 028385 9 RDTCRRAAPS-IVMSED----MVKDGYEDIVNIDISS---VAIDMMKMKYEEIPQLKYLQMDVRDMSF---------FED 71 (210)
Q Consensus 9 ~~vLdiGcG~-G~~~~~----l~~~~~~~v~~vD~s~---~~~~~a~~~~~~~~~v~~~~~d~~~~~~---------~~~ 71 (210)
.++|=.|+++ |.++.. +++.+. +|+.++.++ ..++...+.. .+..++.+|+.+... -.-
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQL---GSDIVLQCDVAEDASIDTMFAELGKVW 85 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhc---CCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3577778751 444444 445576 899999886 3333332222 234678889887420 112
Q ss_pred CcccEEEECCccchh-----ccCC-CchHHHH-----------HHHHHHHHhccCCcEEEEEE
Q 028385 72 ESFDAVIDKGTLDSL-----MCGT-NAPISAS-----------QMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 72 ~~fD~Vi~~~~l~~~-----~~~~-~~~~~~~-----------~~l~~i~r~LkpgG~~~~~~ 117 (210)
+..|+++.+...... .+.. .+.++.. .+++.+.+.++++|.++.++
T Consensus 86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (265)
T 1qsg_A 86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLS 148 (265)
T ss_dssp SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEc
Confidence 468999987654321 0000 1222222 34556666666678887765
No 449
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=82.86 E-value=13 Score=27.88 Aligned_cols=74 Identities=12% Similarity=0.112 Sum_probs=47.5
Q ss_pred CCEEEeCCCCc---hhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCcEEEEccc--CCCC---C------CCCC
Q 028385 9 RDTCRRAAPSI---VMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQMDV--RDMS---F------FEDE 72 (210)
Q Consensus 9 ~~vLdiGcG~G---~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~v~~~~~d~--~~~~---~------~~~~ 72 (210)
..+|=.|++.| .++..+++.|. +|+.+|.++..++...+.... ..++.++.+|+ .+.. . -.-+
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g 91 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYP 91 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCC
Confidence 35777777655 23344555676 899999998877766554422 13678889998 4421 0 0124
Q ss_pred cccEEEECCcc
Q 028385 73 SFDAVIDKGTL 83 (210)
Q Consensus 73 ~fD~Vi~~~~l 83 (210)
..|+++.+...
T Consensus 92 ~id~lv~nAg~ 102 (252)
T 3f1l_A 92 RLDGVLHNAGL 102 (252)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 68999988664
No 450
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=82.34 E-value=6.6 Score=30.14 Aligned_cols=73 Identities=7% Similarity=0.079 Sum_probs=47.3
Q ss_pred CEEEeCCCCch---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc-CCCCcEEEEcccCCCCC---C-----CCCcccEE
Q 028385 10 DTCRRAAPSIV---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYE-EIPQLKYLQMDVRDMSF---F-----EDESFDAV 77 (210)
Q Consensus 10 ~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~v~~~~~d~~~~~~---~-----~~~~fD~V 77 (210)
.+|=.|++.|. ++..+++.|. +|+.+|.++...+...+... ...++.++.+|+.+... + ..+..|++
T Consensus 35 ~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~l 113 (275)
T 4imr_A 35 TALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDIL 113 (275)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEE
Confidence 46666765542 3344455576 89999998876665555442 22578899999987530 0 01478999
Q ss_pred EECCcc
Q 028385 78 IDKGTL 83 (210)
Q Consensus 78 i~~~~l 83 (210)
+.+...
T Consensus 114 vnnAg~ 119 (275)
T 4imr_A 114 VINASA 119 (275)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 987664
No 451
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=82.13 E-value=12 Score=27.11 Aligned_cols=97 Identities=11% Similarity=0.078 Sum_probs=55.1
Q ss_pred CEEEeCCCCchhHHHHHHc----CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCC-CC--CCCCCcccEEEECCc
Q 028385 10 DTCRRAAPSIVMSEDMVKD----GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRD-MS--FFEDESFDAVIDKGT 82 (210)
Q Consensus 10 ~vLdiGcG~G~~~~~l~~~----~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~-~~--~~~~~~fD~Vi~~~~ 82 (210)
+||=.|+ +|.++..+++. +. +|++++.++.. ....++++++.+|+.+ .. .-.-+.+|+|+....
T Consensus 2 ~ilItGa-tG~iG~~l~~~L~~~g~-~V~~~~R~~~~-------~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag 72 (219)
T 3dqp_A 2 KIFIVGS-TGRVGKSLLKSLSTTDY-QIYAGARKVEQ-------VPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSG 72 (219)
T ss_dssp EEEEEST-TSHHHHHHHHHHTTSSC-EEEEEESSGGG-------SCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCC
T ss_pred eEEEECC-CCHHHHHHHHHHHHCCC-EEEEEECCccc-------hhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCc
Confidence 5777774 56666666553 54 89999988642 2222678999999988 32 011235899998665
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
...-..-..+......+++.+.+. ..++++.++
T Consensus 73 ~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~S 105 (219)
T 3dqp_A 73 SGGKSLLKVDLYGAVKLMQAAEKA--EVKRFILLS 105 (219)
T ss_dssp CTTSSCCCCCCHHHHHHHHHHHHT--TCCEEEEEC
T ss_pred CCCCCcEeEeHHHHHHHHHHHHHh--CCCEEEEEC
Confidence 432111111223344555555432 224666554
No 452
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=82.06 E-value=4.5 Score=30.93 Aligned_cols=106 Identities=8% Similarity=0.139 Sum_probs=59.5
Q ss_pred CCEEEeCCC-CchhHHHH----HHcCCCcEEEEeCCHH---HHHHHHHhhcCCCCcEEEEcccCCCCC----C-----CC
Q 028385 9 RDTCRRAAP-SIVMSEDM----VKDGYEDIVNIDISSV---AIDMMKMKYEEIPQLKYLQMDVRDMSF----F-----ED 71 (210)
Q Consensus 9 ~~vLdiGcG-~G~~~~~l----~~~~~~~v~~vD~s~~---~~~~a~~~~~~~~~v~~~~~d~~~~~~----~-----~~ 71 (210)
..+|=.|++ +|.++..+ ++.|. +|+.++.++. .++...+.. .++.++.+|+.+... + .-
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQEL---NSPYVYELDVSKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc---CCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 457888875 24444444 44465 8999998875 233222222 347788899887420 0 02
Q ss_pred CcccEEEECCccchh-----ccCCCchHHH-----------HHHHHHHHHhccCCcEEEEEEc
Q 028385 72 ESFDAVIDKGTLDSL-----MCGTNAPISA-----------SQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 72 ~~fD~Vi~~~~l~~~-----~~~~~~~~~~-----------~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
+..|+++.+...... .+...+.++. ..+++.+.+.|+++|.++.++.
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 145 (275)
T 2pd4_A 83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSY 145 (275)
T ss_dssp SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEec
Confidence 468999987654321 0111122322 2345566666766788877653
No 453
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=81.89 E-value=28 Score=31.08 Aligned_cols=99 Identities=15% Similarity=0.241 Sum_probs=64.5
Q ss_pred CCEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-------------C----CCcEEEEcccCCCCCC
Q 028385 9 RDTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-------------I----PQLKYLQMDVRDMSFF 69 (210)
Q Consensus 9 ~~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-------------~----~~v~~~~~d~~~~~~~ 69 (210)
.+|-=||+|+ +.++..++..|. .|+..|++++.++.+++.... . .++. ...|...+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l--- 391 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLR-FSSSTKEL--- 391 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEE-EESCGGGG---
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-chhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhc-ccCcHHHH---
Confidence 3678888887 344555566677 899999999999888764320 0 1111 22222222
Q ss_pred CCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 70 EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 70 ~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
...|+||-. +.+-+ +-.+++++++.++++|+.++..-+.+-|.
T Consensus 392 --~~aDlVIEA-V~E~l-------~iK~~vf~~le~~~~~~aIlASNTSsl~i 434 (742)
T 3zwc_A 392 --STVDLVVEA-VFEDM-------NLKKKVFAELSALCKPGAFLCTNTSALNV 434 (742)
T ss_dssp --GSCSEEEEC-CCSCH-------HHHHHHHHHHHHHSCTTCEEEECCSSSCH
T ss_pred --hhCCEEEEe-ccccH-------HHHHHHHHHHhhcCCCCceEEecCCcCCh
Confidence 246888753 34444 78899999999999999988655444333
No 454
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=81.88 E-value=2.1 Score=30.47 Aligned_cols=95 Identities=9% Similarity=0.036 Sum_probs=56.1
Q ss_pred CCCEEEeCCCCchhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhc-CC-CCcEEEEcccCCC-CCCC----CCcccEEEE
Q 028385 8 TRDTCRRAAPSIVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYE-EI-PQLKYLQMDVRDM-SFFE----DESFDAVID 79 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~-~~-~~v~~~~~d~~~~-~~~~----~~~fD~Vi~ 79 (210)
++-|||+|-|+|..-..+.+. +..+++.+|-.-. -.. .. +.-.++.+|+.+. + .. ....-++.+
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~-------~hp~~~P~~e~~ilGdi~~tL~-~~~~r~g~~a~LaHa 112 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVA-------SHPDSTPPEAQLILGDIRETLP-ATLERFGATASLVHA 112 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCC-------CCGGGCCCGGGEEESCHHHHHH-HHHHHHCSCEEEEEE
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeec-------cCCCCCCchHheecccHHHHHH-HHHHhcCCceEEEEe
Confidence 467999999999999989886 6668999995311 011 11 3456888888774 2 10 223333333
Q ss_pred CCccchhccCCCch--HHHHHHHHHHHHhccCCcEEEE
Q 028385 80 KGTLDSLMCGTNAP--ISASQMLGEVSRLLKPGGIYML 115 (210)
Q Consensus 80 ~~~l~~~~~~~~~~--~~~~~~l~~i~r~LkpgG~~~~ 115 (210)
... ++.... .....+-.-+..+|.|||.++.
T Consensus 113 D~G-----~g~~~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 113 DLG-----GHNREKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp CCC-----CSCHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ecC-----CCCcchhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 211 111111 1233344557788999998843
No 455
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=81.75 E-value=0.52 Score=38.21 Aligned_cols=100 Identities=8% Similarity=0.088 Sum_probs=54.6
Q ss_pred CCEEEeCCCC-chhHHHHHH-cCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 9 RDTCRRAAPS-IVMSEDMVK-DGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 9 ~~vLdiGcG~-G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
.+|+=+|+|. |.....++. .|. +|+.+|.++.-++.+++.... .+.....+..++. -.-..+|+|+..-.....
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS--RVELLYSNSAEIE-TAVAEADLLIGAVLVPGR 243 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG--GSEEEECCHHHHH-HHHHTCSEEEECCCCTTS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc--eeEeeeCCHHHHH-HHHcCCCEEEECCCcCCC
Confidence 6799999854 333333333 366 899999999888877665422 2222222211111 001258999875432210
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
....-+.++..+.|++||.++-+.+.
T Consensus 244 -------~~~~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 244 -------RAPILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp -------SCCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred -------CCCeecCHHHHhhCCCCCEEEEEecC
Confidence 00000133456788999988665443
No 456
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=81.60 E-value=13 Score=27.03 Aligned_cols=69 Identities=6% Similarity=0.004 Sum_probs=42.7
Q ss_pred EEEeCCCCc---hhHHHHH-HcCCCcEEEEeCCHH-HHHHHHHhhcCCCCcEEEEcccCCCCCC--CCCcccEEEECCcc
Q 028385 11 TCRRAAPSI---VMSEDMV-KDGYEDIVNIDISSV-AIDMMKMKYEEIPQLKYLQMDVRDMSFF--EDESFDAVIDKGTL 83 (210)
Q Consensus 11 vLdiGcG~G---~~~~~l~-~~~~~~v~~vD~s~~-~~~~a~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD~Vi~~~~l 83 (210)
||=.|+..| .+...++ +.+. +|++++.++. .++.... ...++.++.+|+.+...+ .-+..|+|+.....
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~ 83 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEII---DHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAME 83 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHH---TSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCC
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhcc---CCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCC
Confidence 888885433 2334445 4566 8999999986 5443321 225789999999874200 01357999986654
No 457
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=81.56 E-value=4.8 Score=32.41 Aligned_cols=93 Identities=10% Similarity=0.076 Sum_probs=55.7
Q ss_pred CCCCEEEeCCC--CchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC----CCCCCcccEEEEC
Q 028385 7 GTRDTCRRAAP--SIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----FFEDESFDAVIDK 80 (210)
Q Consensus 7 ~~~~vLdiGcG--~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~----~~~~~~fD~Vi~~ 80 (210)
...+||=+|++ .|..+..+++....+|+++. ++.-.+.+++.-. -.++...-.+.. ...++.+|+|+..
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa----~~vi~~~~~~~~~~v~~~t~g~~d~v~d~ 238 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGA----EEVFDYRAPNLAQTIRTYTKNNLRYALDC 238 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTC----SEEEETTSTTHHHHHHHHTTTCCCEEEES
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCC----cEEEECCCchHHHHHHHHccCCccEEEEC
Confidence 33579999984 57777777776333788885 7877777765421 122222111110 0123459999974
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhc-cCCcEEEEEE
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLL-KPGGIYMLIT 117 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~L-kpgG~~~~~~ 117 (210)
-. -...+....+.| ++||+++.+.
T Consensus 239 ~g-------------~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 239 IT-------------NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp SC-------------SHHHHHHHHHHSCTTCEEEEESS
T ss_pred CC-------------chHHHHHHHHHhhcCCCEEEEEe
Confidence 22 123466677788 6999987653
No 458
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=80.83 E-value=24 Score=29.57 Aligned_cols=98 Identities=9% Similarity=0.081 Sum_probs=57.0
Q ss_pred CCEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHH-HHHHHh---h-c-C-C---------CCcEEEEcccCCCCCCC
Q 028385 9 RDTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAI-DMMKMK---Y-E-E-I---------PQLKYLQMDVRDMSFFE 70 (210)
Q Consensus 9 ~~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~---~-~-~-~---------~~v~~~~~d~~~~~~~~ 70 (210)
.+|.=||+|+ +.++..+++.+. +|+..|.+++.. +..++. . + . . .++++. .|... +
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t-~dl~a---l- 128 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT-SDFHK---L- 128 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE-SCGGG---C-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe-CCHHH---H-
Confidence 4688889886 455666667777 899999998821 111111 0 0 0 0 233332 33322 2
Q ss_pred CCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 71 DESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 71 ~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
...|+||..-. + ...-...+++++...++|+.++...+-+-+
T Consensus 129 -~~aDlVIeAVp-e-------~~~vk~~v~~~l~~~~~~~aIlasnTSsl~ 170 (460)
T 3k6j_A 129 -SNCDLIVESVI-E-------DMKLKKELFANLENICKSTCIFGTNTSSLD 170 (460)
T ss_dssp -TTCSEEEECCC-S-------CHHHHHHHHHHHHTTSCTTCEEEECCSSSC
T ss_pred -ccCCEEEEcCC-C-------CHHHHHHHHHHHHhhCCCCCEEEecCCChh
Confidence 24688886322 1 124567788999999999988754443333
No 459
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=80.72 E-value=8.2 Score=29.70 Aligned_cols=70 Identities=14% Similarity=0.197 Sum_probs=48.0
Q ss_pred CCEEEeCCCCch---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-------CCCCCcccEEE
Q 028385 9 RDTCRRAAPSIV---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-------FFEDESFDAVI 78 (210)
Q Consensus 9 ~~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-------~~~~~~fD~Vi 78 (210)
..+|=.|++.|. ++..+++.|. +|+.++.++...+.+.+... .++.++.+|+.+.. .+ +..|+++
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv 91 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMA--GQVEVRELDLQDLSSVRRFADGV--SGADVLI 91 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSS--SEEEEEECCTTCHHHHHHHHHTC--CCEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhc--CCeeEEEcCCCCHHHHHHHHHhc--CCCCEEE
Confidence 457777766542 3344445576 89999999887776655442 46889999998743 12 4789999
Q ss_pred ECCcc
Q 028385 79 DKGTL 83 (210)
Q Consensus 79 ~~~~l 83 (210)
.+...
T Consensus 92 ~nAg~ 96 (291)
T 3rd5_A 92 NNAGI 96 (291)
T ss_dssp ECCCC
T ss_pred ECCcC
Confidence 87664
No 460
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=80.67 E-value=7.2 Score=32.25 Aligned_cols=101 Identities=13% Similarity=0.032 Sum_probs=54.4
Q ss_pred CEEEeCCCC-c-hhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC---------------CCCcEEEEcccCCCCCCCCC
Q 028385 10 DTCRRAAPS-I-VMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE---------------IPQLKYLQMDVRDMSFFEDE 72 (210)
Q Consensus 10 ~vLdiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------------~~~v~~~~~d~~~~~~~~~~ 72 (210)
+|.=||+|. | .++..+++.+. +|+++|.+++.++..++.... ..++.+ ..|.... -.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~-~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~----~~ 75 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKKA----VL 75 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHH----HH
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHHH----hc
Confidence 577788876 3 44455566676 899999999988876653110 011222 1222110 11
Q ss_pred cccEEEECCccchhccCCCchHHHHHHHHHHHHhccC---CcEEEEE
Q 028385 73 SFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKP---GGIYMLI 116 (210)
Q Consensus 73 ~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~Lkp---gG~~~~~ 116 (210)
..|+|+..-.-..-..+.........+++++.+.|++ |..++..
T Consensus 76 ~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~ 122 (436)
T 1mv8_A 76 DSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVR 122 (436)
T ss_dssp TCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEEC
T ss_pred cCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEe
Confidence 3587776421110000111112267788899999998 6555433
No 461
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=80.61 E-value=16 Score=27.38 Aligned_cols=70 Identities=16% Similarity=0.236 Sum_probs=45.3
Q ss_pred EEEeCCCCc---hhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-------CC--CCCcccEEE
Q 028385 11 TCRRAAPSI---VMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-------FF--EDESFDAVI 78 (210)
Q Consensus 11 vLdiGcG~G---~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-------~~--~~~~fD~Vi 78 (210)
+|=.|++.| .++..+++.|. +|+.++.++..++...+... .++.++.+|+.+.. .. .-+..|+++
T Consensus 3 vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 79 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILV 79 (248)
T ss_dssp EEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEE
T ss_pred EEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhc--CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 455565444 23344555676 89999999887766655443 36788899988742 01 124789999
Q ss_pred ECCcc
Q 028385 79 DKGTL 83 (210)
Q Consensus 79 ~~~~l 83 (210)
.+...
T Consensus 80 nnAg~ 84 (248)
T 3asu_A 80 NNAGL 84 (248)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 87654
No 462
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=80.56 E-value=10 Score=30.98 Aligned_cols=73 Identities=14% Similarity=0.112 Sum_probs=43.1
Q ss_pred CCEEEeCCCCchhHHHHHHc----CCCcEEEEeCCHH---HHHHHHHhhc----------CCCCcEEEEcccCCCCCC-C
Q 028385 9 RDTCRRAAPSIVMSEDMVKD----GYEDIVNIDISSV---AIDMMKMKYE----------EIPQLKYLQMDVRDMSFF-E 70 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~~----~~~~v~~vD~s~~---~~~~a~~~~~----------~~~~v~~~~~d~~~~~~~-~ 70 (210)
.+||=.|+ +|.++..+++. +. +|++++.++. ..+...+... ...++.++.+|+.+.+.+ .
T Consensus 70 ~~vlVTGa-tG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~ 147 (427)
T 4f6c_A 70 GNTLLTGA-TGFLGAYLIEALQGYSH-RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVL 147 (427)
T ss_dssp EEEEEECT-TSHHHHHHHHHHTTTEE-EEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCCC
T ss_pred CEEEEecC-CcHHHHHHHHHHHcCCC-EEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCCC
Confidence 46787775 56666666543 44 7999988765 3333222111 015789999999884412 2
Q ss_pred CCcccEEEECCcc
Q 028385 71 DESFDAVIDKGTL 83 (210)
Q Consensus 71 ~~~fD~Vi~~~~l 83 (210)
...+|+|+.....
T Consensus 148 ~~~~d~Vih~A~~ 160 (427)
T 4f6c_A 148 PENMDTIIHAGAR 160 (427)
T ss_dssp SSCCSEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 4578999976554
No 463
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=80.48 E-value=7.5 Score=30.24 Aligned_cols=92 Identities=11% Similarity=0.086 Sum_probs=55.2
Q ss_pred CCEEEeCCCC-c-hhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc---------C-C--------------CCcEEEEcc
Q 028385 9 RDTCRRAAPS-I-VMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE---------E-I--------------PQLKYLQMD 62 (210)
Q Consensus 9 ~~vLdiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---------~-~--------------~~v~~~~~d 62 (210)
.+|.=||+|. | .++..+++.+. +|+.+|.+++.++.+++... . . .++.+. .|
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~-~~ 93 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS-TD 93 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE-SC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe-cC
Confidence 3588899986 3 35566666676 89999999998887654221 0 0 022222 22
Q ss_pred cCCCCCCCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEE
Q 028385 63 VRDMSFFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYM 114 (210)
Q Consensus 63 ~~~~~~~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~ 114 (210)
..+. -...|+|+..-.- .......+++++...++++..++
T Consensus 94 ~~~~----~~~aD~Vi~avp~--------~~~~~~~v~~~l~~~~~~~~iv~ 133 (302)
T 1f0y_A 94 AASV----VHSTDLVVEAIVE--------NLKVKNELFKRLDKFAAEHTIFA 133 (302)
T ss_dssp HHHH----TTSCSEEEECCCS--------CHHHHHHHHHHHTTTSCTTCEEE
T ss_pred HHHh----hcCCCEEEEcCcC--------cHHHHHHHHHHHHhhCCCCeEEE
Confidence 2210 1246888864211 11335677888888898887654
No 464
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=80.26 E-value=0.68 Score=37.81 Aligned_cols=99 Identities=12% Similarity=0.125 Sum_probs=52.4
Q ss_pred CCCEEEeCCCC-chhHHHHHH-cCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 8 TRDTCRRAAPS-IVMSEDMVK-DGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
..+|+=+|+|. |......++ .|. +|+++|.++..++.+++.... .+.....+..++. -.-...|+|+..-....
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~--~~~~~~~~~~~l~-~~l~~aDvVi~~~~~p~ 243 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCG--RIHTRYSSAYELE-GAVKRADLVIGAVLVPG 243 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT--SSEEEECCHHHHH-HHHHHCSEEEECCCCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCC--eeEeccCCHHHHH-HHHcCCCEEEECCCcCC
Confidence 45789999854 333333333 365 899999999988877664421 1212111111111 00125799987432110
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
. ....-+.++..+.|||||.++.+.
T Consensus 244 ~-------~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 244 A-------KAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp S-------CCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred C-------CCcceecHHHHhcCCCCcEEEEEe
Confidence 0 000111345667889999886554
No 465
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=80.10 E-value=15 Score=28.79 Aligned_cols=98 Identities=9% Similarity=0.053 Sum_probs=57.8
Q ss_pred CCCEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC--CCCcEEEE-ccc-CCCCCCCCCcccEEEECC
Q 028385 8 TRDTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE--IPQLKYLQ-MDV-RDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 8 ~~~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~v~~~~-~d~-~~~~~~~~~~fD~Vi~~~ 81 (210)
..+|+=||+|. +.++..+++.+. +|+.+ .+++.++..++.-.. .+...+.. ..+ .+.. .-..+|+|+..-
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~D~vilav 94 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGH-EVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPS--AVQGADLVLFCV 94 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGG--GGTTCSEEEECC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCC-eEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHH--HcCCCCEEEEEc
Confidence 45789999885 345555566666 89999 888888777654210 11111110 000 1111 124689888642
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
. ......+++.+...++++..++...-+
T Consensus 95 k----------~~~~~~~l~~l~~~l~~~~~iv~~~nG 122 (318)
T 3hwr_A 95 K----------STDTQSAALAMKPALAKSALVLSLQNG 122 (318)
T ss_dssp C----------GGGHHHHHHHHTTTSCTTCEEEEECSS
T ss_pred c----------cccHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 2 235678889999999998877655433
No 466
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=80.01 E-value=8.6 Score=33.87 Aligned_cols=107 Identities=10% Similarity=0.155 Sum_probs=69.5
Q ss_pred CCCCEEEeCCCCchhHHHHHHc-C--------CCcEEEEeCCHHHHHHHHHhhcCC------------------------
Q 028385 7 GTRDTCRRAAPSIVMSEDMVKD-G--------YEDIVNIDISSVAIDMMKMKYEEI------------------------ 53 (210)
Q Consensus 7 ~~~~vLdiGcG~G~~~~~l~~~-~--------~~~v~~vD~s~~~~~~a~~~~~~~------------------------ 53 (210)
+...|+-+|||.=.....+... + ...++=+|.. +.++.-++.+...
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p-~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYS-DLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECH-HHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccH-HHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 3456999999998888877654 2 1234555543 3333333322200
Q ss_pred --CCcEEEEcccCCCC---------CC-CCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 54 --PQLKYLQMDVRDMS---------FF-EDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 54 --~~v~~~~~d~~~~~---------~~-~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
.+..++.+|+.+.. .+ ..+.--++++-.+|.++ +.+...++++.+.+. ++|.+++.+...|
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl-----~~~~~~~ll~~~~~~--~~~~~~~~e~~~~ 258 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYM-----KPERSDSIIEATSKM--ENSHFIILEQLIP 258 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGS-----CHHHHHHHHHHHHTS--SSEEEEEEEECCT
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEc-----CHHHHHHHHHHHhhC--CCceEEEEEeecC
Confidence 36789999998742 12 34445577888888888 778999999999865 6777777664444
No 467
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=79.86 E-value=12 Score=28.66 Aligned_cols=91 Identities=7% Similarity=-0.012 Sum_probs=54.6
Q ss_pred CCEEEeCCCC-c-hhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 9 RDTCRRAAPS-I-VMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 9 ~~vLdiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
++|.=||+|. | .++..+.+ +. +|+.+|.++...+...+.- +... +..+. -...|+|+..-.-
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g-----~~~~--~~~~~----~~~~D~vi~~v~~--- 65 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEF-----GSEA--VPLER----VAEARVIFTCLPT--- 65 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHH-----CCEE--CCGGG----GGGCSEEEECCSS---
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCC-----Cccc--CHHHH----HhCCCEEEEeCCC---
Confidence 3688889986 3 34455556 65 7999999988777665431 1221 11111 1257998864321
Q ss_pred ccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCc
Q 028385 87 MCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDP 121 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p 121 (210)
......+++++...+++|..++..+...+
T Consensus 66 ------~~~~~~v~~~l~~~l~~~~~vv~~s~~~~ 94 (289)
T 2cvz_A 66 ------TREVYEVAEALYPYLREGTYWVDATSGEP 94 (289)
T ss_dssp ------HHHHHHHHHHHTTTCCTTEEEEECSCCCH
T ss_pred ------hHHHHHHHHHHHhhCCCCCEEEECCCCCH
Confidence 12355677888888888877654443333
No 468
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=79.74 E-value=4.7 Score=32.87 Aligned_cols=77 Identities=12% Similarity=0.174 Sum_probs=49.7
Q ss_pred CCEEEeCCCCchhHHHHHH----cCCCcEEEEeCCHHHHHHHHHhhcC-----CCCcEEEEcccCCCC----CCCCCccc
Q 028385 9 RDTCRRAAPSIVMSEDMVK----DGYEDIVNIDISSVAIDMMKMKYEE-----IPQLKYLQMDVRDMS----FFEDESFD 75 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l~~----~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~v~~~~~d~~~~~----~~~~~~fD 75 (210)
.+||=.|+ +|.++..+++ .+..+|+++|.++..+....+.... ..++.++.+|+.+.. .+....+|
T Consensus 36 k~vLVTGa-tG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D 114 (399)
T 3nzo_A 36 SRFLVLGG-AGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQYD 114 (399)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCCS
T ss_pred CEEEEEcC-ChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCCC
Confidence 46777775 4555555544 4635899999998876655443311 156889999988742 12235789
Q ss_pred EEEECCccchh
Q 028385 76 AVIDKGTLDSL 86 (210)
Q Consensus 76 ~Vi~~~~l~~~ 86 (210)
+|+......|.
T Consensus 115 ~Vih~Aa~~~~ 125 (399)
T 3nzo_A 115 YVLNLSALKHV 125 (399)
T ss_dssp EEEECCCCCCG
T ss_pred EEEECCCcCCC
Confidence 99987665444
No 469
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=79.33 E-value=8.6 Score=28.99 Aligned_cols=74 Identities=20% Similarity=0.251 Sum_probs=50.3
Q ss_pred CCEEEeCCCCch---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC-CCcEEEEcccCCCCC----C-----CCCccc
Q 028385 9 RDTCRRAAPSIV---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI-PQLKYLQMDVRDMSF----F-----EDESFD 75 (210)
Q Consensus 9 ~~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~----~-----~~~~fD 75 (210)
..+|=.|++.|. ++..+++.|. +|+.+|.++..++.+.+..... .++.++.+|+.+... + .-+..|
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 85 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRID 85 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 456777766552 3344555676 8999999998888777766443 578899999987430 0 013689
Q ss_pred EEEECCcc
Q 028385 76 AVIDKGTL 83 (210)
Q Consensus 76 ~Vi~~~~l 83 (210)
+++.+...
T Consensus 86 ~lv~nAg~ 93 (257)
T 3imf_A 86 ILINNAAG 93 (257)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99987653
No 470
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=79.05 E-value=6.5 Score=30.00 Aligned_cols=63 Identities=8% Similarity=0.014 Sum_probs=42.2
Q ss_pred CCCEEEeCCCCchhHHHHHH----cCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCC---CCCCcccEEEEC
Q 028385 8 TRDTCRRAAPSIVMSEDMVK----DGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF---FEDESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiGcG~G~~~~~l~~----~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~---~~~~~fD~Vi~~ 80 (210)
.++||=.|+ |.++..+++ .+. +|++++.++.. ..++++++.+|+.+... ...+.+|+|+..
T Consensus 3 ~~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~---------~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~ 70 (286)
T 3gpi_A 3 LSKILIAGC--GDLGLELARRLTAQGH-EVTGLRRSAQP---------MPAGVQTLIADVTRPDTLASIVHLRPEILVYC 70 (286)
T ss_dssp CCCEEEECC--SHHHHHHHHHHHHTTC-CEEEEECTTSC---------CCTTCCEEECCTTCGGGCTTGGGGCCSEEEEC
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCC-EEEEEeCCccc---------cccCCceEEccCCChHHHHHhhcCCCCEEEEe
Confidence 357999984 677766654 466 89999976532 11578899999987531 122359999875
Q ss_pred Cc
Q 028385 81 GT 82 (210)
Q Consensus 81 ~~ 82 (210)
..
T Consensus 71 a~ 72 (286)
T 3gpi_A 71 VA 72 (286)
T ss_dssp HH
T ss_pred CC
Confidence 43
No 471
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=78.99 E-value=8.8 Score=29.38 Aligned_cols=106 Identities=15% Similarity=0.117 Sum_probs=58.2
Q ss_pred CEEEeCCCCchhHHHH----HHcCCCcEEEEeCCHH-HHHHHHHhhc-CCCCcEEEEcccCCCCC----CC-----CCcc
Q 028385 10 DTCRRAAPSIVMSEDM----VKDGYEDIVNIDISSV-AIDMMKMKYE-EIPQLKYLQMDVRDMSF----FE-----DESF 74 (210)
Q Consensus 10 ~vLdiGcG~G~~~~~l----~~~~~~~v~~vD~s~~-~~~~a~~~~~-~~~~v~~~~~d~~~~~~----~~-----~~~f 74 (210)
.+|=.|++.| ++..+ ++.|. +|+.++.++. ..+...+... ...++.++.+|+.+... +. -+..
T Consensus 31 ~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 108 (283)
T 1g0o_A 31 VALVTGAGRG-IGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKL 108 (283)
T ss_dssp EEEETTTTSH-HHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4666666554 44444 44566 7999988754 2333322221 12467888999877420 00 1368
Q ss_pred cEEEECCccchhc-cCCCchHHH-----------HHHHHHHHHhccCCcEEEEEE
Q 028385 75 DAVIDKGTLDSLM-CGTNAPISA-----------SQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 75 D~Vi~~~~l~~~~-~~~~~~~~~-----------~~~l~~i~r~LkpgG~~~~~~ 117 (210)
|+++.+....... ..+.+.++. ..+++.+.+.|+.+|.++.++
T Consensus 109 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 109 DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 9999876543210 001122222 234566677777778887765
No 472
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=78.94 E-value=18 Score=27.75 Aligned_cols=88 Identities=14% Similarity=0.051 Sum_probs=53.2
Q ss_pred CCEEEeCCCC--chhHHHHHHcC-CCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 9 RDTCRRAAPS--IVMSEDMVKDG-YEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 9 ~~vLdiGcG~--G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
++|.=||+|. +.++..+.+.+ ..+|++.|.++..++.+++... ......|..+. -...|+|+..-
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~----~~~~~~~~~~~----~~~aDvVilav---- 74 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGI----VDEATADFKVF----AALADVIILAV---- 74 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTS----CSEEESCTTTT----GGGCSEEEECS----
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCC----cccccCCHHHh----hcCCCEEEEcC----
Confidence 5788899876 34444455553 2479999999988776654211 11112232221 13579888642
Q ss_pred hccCCCchHHHHHHHHHHHHh-ccCCcEEE
Q 028385 86 LMCGTNAPISASQMLGEVSRL-LKPGGIYM 114 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~-LkpgG~~~ 114 (210)
+......+++++... ++++..++
T Consensus 75 ------p~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 75 ------PIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ------CHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred ------CHHHHHHHHHHHHhcCCCCCCEEE
Confidence 224457788888888 88876654
No 473
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=78.94 E-value=17 Score=26.76 Aligned_cols=70 Identities=13% Similarity=0.211 Sum_probs=44.9
Q ss_pred CCEEEeCCCCchhHHH----HHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC----CC-CCCcccEEEE
Q 028385 9 RDTCRRAAPSIVMSED----MVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----FF-EDESFDAVID 79 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~----l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~----~~-~~~~fD~Vi~ 79 (210)
.+||=.|++. .++.. +++.+. +|++++.++..++...+.. ++++++.+|+.+.. .+ .-+..|+|+.
T Consensus 8 ~~vlVTGasg-giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 82 (244)
T 1cyd_A 8 LRALVTGAGK-GIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKEC---PGIEPVCVDLGDWDATEKALGGIGPVDLLVN 82 (244)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHS---TTCEEEECCTTCHHHHHHHHTTCCCCSEEEE
T ss_pred CEEEEeCCCc-hHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhc---cCCCcEEecCCCHHHHHHHHHHcCCCCEEEE
Confidence 4678777654 44433 444566 8999999987666544433 45677888988743 01 1246899998
Q ss_pred CCcc
Q 028385 80 KGTL 83 (210)
Q Consensus 80 ~~~l 83 (210)
+...
T Consensus 83 ~Ag~ 86 (244)
T 1cyd_A 83 NAAL 86 (244)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 7653
No 474
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=78.81 E-value=3.7 Score=34.82 Aligned_cols=88 Identities=13% Similarity=0.064 Sum_probs=51.5
Q ss_pred CCCEEEeCCCC-chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
..+|+=+|+|. |......++. |. +|+++|.++...+.+++. .+.+ .++.+. . ...|+|+..-.-.+
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~-----Ga~~--~~l~e~--l--~~aDvVi~atgt~~ 341 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMME-----GFDV--VTVEEA--I--GDADIVVTATGNKD 341 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT-----TCEE--CCHHHH--G--GGCSEEEECSSSSC
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc-----CCEE--ecHHHH--H--hCCCEEEECCCCHH
Confidence 45788898864 3333333333 55 899999999887766543 1222 222221 1 35799987432222
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEcC
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYG 119 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~ 119 (210)
+ +-.+..+.||+||+++.+...
T Consensus 342 ~------------i~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 342 I------------IMLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp S------------BCHHHHHHSCTTCEEEECSSS
T ss_pred H------------HHHHHHHhcCCCcEEEEeCCC
Confidence 1 012556778999999766543
No 475
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=78.37 E-value=5.3 Score=30.52 Aligned_cols=107 Identities=18% Similarity=0.193 Sum_probs=61.9
Q ss_pred CEEEeCCCCch---hHHHHHHcCCCcEEEE-eCCHHHHHHHHHhhc-CCCCcEEEEcccCCCCC----C-----CCCccc
Q 028385 10 DTCRRAAPSIV---MSEDMVKDGYEDIVNI-DISSVAIDMMKMKYE-EIPQLKYLQMDVRDMSF----F-----EDESFD 75 (210)
Q Consensus 10 ~vLdiGcG~G~---~~~~l~~~~~~~v~~v-D~s~~~~~~a~~~~~-~~~~v~~~~~d~~~~~~----~-----~~~~fD 75 (210)
.+|=.|++.|. ++..+++.|. +|+.+ ..++...+...+... ...++.++.+|+.+... + .-+..|
T Consensus 29 ~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 107 (267)
T 3u5t_A 29 VAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVD 107 (267)
T ss_dssp EEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46777776653 3445555677 67766 445555555444432 22568889999987430 0 014689
Q ss_pred EEEECCccchhc-cCCCchHH-----------HHHHHHHHHHhccCCcEEEEEE
Q 028385 76 AVIDKGTLDSLM-CGTNAPIS-----------ASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 76 ~Vi~~~~l~~~~-~~~~~~~~-----------~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
+++.+....... +...+.++ ...+++.+.+.++++|.++.++
T Consensus 108 ~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 108 VLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 999876543211 11112222 2245667777788888887765
No 476
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=78.35 E-value=5.6 Score=32.00 Aligned_cols=67 Identities=16% Similarity=0.105 Sum_probs=41.4
Q ss_pred CCCEEEeCCCC-chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCC--CCCcccEEEECC
Q 028385 8 TRDTCRRAAPS-IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF--EDESFDAVIDKG 81 (210)
Q Consensus 8 ~~~vLdiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD~Vi~~~ 81 (210)
.++||=+|||. |......+.... +|+..|.+...++.+++ .+..+..|+.+...+ .-...|+|++..
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~-~v~~~~~~~~~~~~~~~------~~~~~~~d~~d~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEF-DVYIGDVNNENLEKVKE------FATPLKVDASNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTS-EEEEEESCHHHHHHHTT------TSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred ccEEEEECCCHHHHHHHHHHhcCC-CeEEEEcCHHHHHHHhc------cCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence 46899999952 333333333333 79999999988776653 345566777653200 113579999854
No 477
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=78.31 E-value=3.7 Score=33.23 Aligned_cols=97 Identities=12% Similarity=0.043 Sum_probs=56.8
Q ss_pred CCCEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 8 TRDTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 8 ~~~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
.++|.=||+|. ..++..+++.+. +|++.|.++..++.+.+. .+.+ ..+..+.- -.....|+|+..-.-
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~-----g~~~-~~s~~e~~-~~a~~~DvVi~~vp~-- 91 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE-----GIAG-ARSIEEFC-AKLVKPRVVWLMVPA-- 91 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT-----TCBC-CSSHHHHH-HHSCSSCEEEECSCG--
T ss_pred CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC-----CCEE-eCCHHHHH-hcCCCCCEEEEeCCH--
Confidence 35788888764 234444555676 899999999887766543 1111 11221111 011235988864322
Q ss_pred hccCCCchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 86 LMCGTNAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
.....++.++...|++|..++-.+-..|.
T Consensus 92 --------~~v~~vl~~l~~~l~~g~iiId~st~~~~ 120 (358)
T 4e21_A 92 --------AVVDSMLQRMTPLLAANDIVIDGGNSHYQ 120 (358)
T ss_dssp --------GGHHHHHHHHGGGCCTTCEEEECSSCCHH
T ss_pred --------HHHHHHHHHHHhhCCCCCEEEeCCCCChH
Confidence 24567788888999988776544433443
No 478
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=78.25 E-value=13 Score=28.50 Aligned_cols=106 Identities=8% Similarity=0.053 Sum_probs=58.1
Q ss_pred CCEEEeCCCC-chhHHH----HHHcCCCcEEEEeCCHH---HHHHHHHhhcCCCCcEEEEcccCCCCC----C-----CC
Q 028385 9 RDTCRRAAPS-IVMSED----MVKDGYEDIVNIDISSV---AIDMMKMKYEEIPQLKYLQMDVRDMSF----F-----ED 71 (210)
Q Consensus 9 ~~vLdiGcG~-G~~~~~----l~~~~~~~v~~vD~s~~---~~~~a~~~~~~~~~v~~~~~d~~~~~~----~-----~~ 71 (210)
..+|=.|+++ |.++.. +++.|. +|+.++.++. .++...+.. .++.++.+|+.+... + .-
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGF---GSDLVVKCDVSLDEDIKNLKKFLEENW 97 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhc---CCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3577778751 444444 445566 8999998875 222222222 346788899887430 0 01
Q ss_pred CcccEEEECCccchh-----ccCCCchHHHH-----------HHHHHHHHhcc-CCcEEEEEEc
Q 028385 72 ESFDAVIDKGTLDSL-----MCGTNAPISAS-----------QMLGEVSRLLK-PGGIYMLITY 118 (210)
Q Consensus 72 ~~fD~Vi~~~~l~~~-----~~~~~~~~~~~-----------~~l~~i~r~Lk-pgG~~~~~~~ 118 (210)
+..|+++.+...... .+...+.++.. .+++.+.+.++ .+|.++.++.
T Consensus 98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS 161 (285)
T 2p91_A 98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSY 161 (285)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEEC
T ss_pred CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEcc
Confidence 468999988654321 01111223222 34455566664 5688777653
No 479
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=78.22 E-value=9.7 Score=28.82 Aligned_cols=107 Identities=13% Similarity=0.105 Sum_probs=65.5
Q ss_pred CEEEeCCCC--c---hhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCcEEEEcccCCCCC---------CCCCc
Q 028385 10 DTCRRAAPS--I---VMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSF---------FEDES 73 (210)
Q Consensus 10 ~vLdiGcG~--G---~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~---------~~~~~ 73 (210)
.+|=-|+++ | ..+..|++.|. +|+.+|.++..++.+.+..++. .++.++.+|+.+... -.-+.
T Consensus 8 ~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 86 (256)
T 4fs3_A 8 TYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGN 86 (256)
T ss_dssp EEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred EEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 456667533 3 24555667777 8999999988777776665432 478899999887430 01257
Q ss_pred ccEEEECCccchhc-----cCCCchHHHH-----------HHHHHHHHhccCCcEEEEEE
Q 028385 74 FDAVIDKGTLDSLM-----CGTNAPISAS-----------QMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 74 fD~Vi~~~~l~~~~-----~~~~~~~~~~-----------~~l~~i~r~LkpgG~~~~~~ 117 (210)
.|+++.+..+.... +.+...++.. ...+.....++.+|.++.++
T Consensus 87 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnis 146 (256)
T 4fs3_A 87 IDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATT 146 (256)
T ss_dssp CSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred CCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEe
Confidence 89999875542210 1111222222 23345566778899987766
No 480
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=78.09 E-value=5.4 Score=30.37 Aligned_cols=107 Identities=12% Similarity=0.198 Sum_probs=61.7
Q ss_pred CCEEEeCC-CCchhHHHHH----HcCCCcEEEEeCCHHH-HHHHHHhhcCCCCcEEEEcccCCCCC-----------CC-
Q 028385 9 RDTCRRAA-PSIVMSEDMV----KDGYEDIVNIDISSVA-IDMMKMKYEEIPQLKYLQMDVRDMSF-----------FE- 70 (210)
Q Consensus 9 ~~vLdiGc-G~G~~~~~l~----~~~~~~v~~vD~s~~~-~~~a~~~~~~~~~v~~~~~d~~~~~~-----------~~- 70 (210)
..+|=.|+ |+|.++..++ +.+. +|+.++.++.- ++...+... .++.++.+|+.+... +.
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLP--AKAPLLELDVQNEEHLASLAGRVTEAIGA 84 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSS--SCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcC--CCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 45788887 3555555444 4566 79999988653 343333221 357788899887430 10
Q ss_pred CCcccEEEECCccchh------ccCCCchHHHH-----------HHHHHHHHhccCCcEEEEEEc
Q 028385 71 DESFDAVIDKGTLDSL------MCGTNAPISAS-----------QMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 71 ~~~fD~Vi~~~~l~~~------~~~~~~~~~~~-----------~~l~~i~r~LkpgG~~~~~~~ 118 (210)
.+..|+++.+.....- .+...+.++.. .+.+.+.+.++++|.++.++.
T Consensus 85 ~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss 149 (269)
T 2h7i_A 85 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDF 149 (269)
T ss_dssp TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred CCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcC
Confidence 1278999987654320 11111223332 345666677777788877653
No 481
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=77.94 E-value=17 Score=27.97 Aligned_cols=89 Identities=16% Similarity=0.136 Sum_probs=55.1
Q ss_pred CCCEEEeCCCC--chhHHHHHHcCC--CcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 8 TRDTCRRAAPS--IVMSEDMVKDGY--EDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 8 ~~~vLdiGcG~--G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
..+|.=||||+ +.+...+.+.+. .+|+..|.+++.++...+.+ ++.+. .|..+. -...|+|+..-
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~----gi~~~-~~~~~~----~~~aDvVilav-- 71 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC----GVHTT-QDNRQG----ALNADVVVLAV-- 71 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT----CCEEE-SCHHHH----HSSCSEEEECS--
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc----CCEEe-CChHHH----HhcCCeEEEEe--
Confidence 36788899975 334445555553 27999999998888776653 23332 122111 12468888632
Q ss_pred chhccCCCchHHHHHHHHHHHHh-ccCCcEEEE
Q 028385 84 DSLMCGTNAPISASQMLGEVSRL-LKPGGIYML 115 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~-LkpgG~~~~ 115 (210)
+......+++++... ++++-.++.
T Consensus 72 --------~p~~~~~vl~~l~~~~l~~~~iiiS 96 (280)
T 3tri_A 72 --------KPHQIKMVCEELKDILSETKILVIS 96 (280)
T ss_dssp --------CGGGHHHHHHHHHHHHHTTTCEEEE
T ss_pred --------CHHHHHHHHHHHHhhccCCCeEEEE
Confidence 225567888888888 776655543
No 482
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=77.77 E-value=32 Score=30.59 Aligned_cols=92 Identities=10% Similarity=0.140 Sum_probs=56.4
Q ss_pred CCEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--------C-----------CCCcEEEEcccCCCC
Q 028385 9 RDTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--------E-----------IPQLKYLQMDVRDMS 67 (210)
Q Consensus 9 ~~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--------~-----------~~~v~~~~~d~~~~~ 67 (210)
.+|.=||+|. +.++..+++.|. +|+..|.+++.++.+++... . ..++++. .|....
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~-~d~~~~- 389 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNY-PVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGS-LDYESF- 389 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTC-CEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEE-SSSGGG-
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEe-CCHHHH-
Confidence 4688899875 344555556676 89999999998887654310 0 0123322 233211
Q ss_pred CCCCCcccEEEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEE
Q 028385 68 FFEDESFDAVIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYML 115 (210)
Q Consensus 68 ~~~~~~fD~Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~ 115 (210)
..-|+|+..-. + +..-...++.++...++|+.++..
T Consensus 390 ----~~aDlVIeaVp-e-------~~~vk~~v~~~l~~~~~~~~Ilas 425 (725)
T 2wtb_A 390 ----RDVDMVIEAVI-E-------NISLKQQIFADLEKYCPQHCILAS 425 (725)
T ss_dssp ----TTCSEEEECCC-S-------CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred ----CCCCEEEEcCc-C-------CHHHHHHHHHHHHhhCCCCcEEEe
Confidence 24688886422 1 113456788899999999876643
No 483
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=77.56 E-value=22 Score=27.33 Aligned_cols=75 Identities=8% Similarity=0.127 Sum_probs=48.6
Q ss_pred CCEEEeCCCCchh---HHHHHHcCC--CcEEEEeCCHHHHHHHHHhhcC---CCCcEEEEcccCCCC-------CC--CC
Q 028385 9 RDTCRRAAPSIVM---SEDMVKDGY--EDIVNIDISSVAIDMMKMKYEE---IPQLKYLQMDVRDMS-------FF--ED 71 (210)
Q Consensus 9 ~~vLdiGcG~G~~---~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~---~~~v~~~~~d~~~~~-------~~--~~ 71 (210)
..+|=.|++.|.- +..+++.+. ..|+.++.+++.++...+.... ..++.++.+|+.+.. .. .-
T Consensus 34 k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 113 (287)
T 3rku_A 34 KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEF 113 (287)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGG
T ss_pred CEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 3577788766532 233444443 3799999999887776655422 246788999998753 01 11
Q ss_pred CcccEEEECCcc
Q 028385 72 ESFDAVIDKGTL 83 (210)
Q Consensus 72 ~~fD~Vi~~~~l 83 (210)
+..|+++.+...
T Consensus 114 g~iD~lVnnAG~ 125 (287)
T 3rku_A 114 KDIDILVNNAGK 125 (287)
T ss_dssp CSCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468999987664
No 484
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=77.51 E-value=26 Score=29.46 Aligned_cols=109 Identities=14% Similarity=0.073 Sum_probs=59.8
Q ss_pred CCCEEEeCCCC-c-hhHHHHHHc-CCCcEEEEeCCHH----HHHHHHHhhcC-----------------CCCcEEEEccc
Q 028385 8 TRDTCRRAAPS-I-VMSEDMVKD-GYEDIVNIDISSV----AIDMMKMKYEE-----------------IPQLKYLQMDV 63 (210)
Q Consensus 8 ~~~vLdiGcG~-G-~~~~~l~~~-~~~~v~~vD~s~~----~~~~a~~~~~~-----------------~~~v~~~~~d~ 63 (210)
.++|.=||+|. | .++..+++. |..+|+++|.+++ .++..++.... ..++.+ ..|.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~-ttd~ 96 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFEC-TPDF 96 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEE-ESCG
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEE-eCcH
Confidence 35788888886 2 344455566 4327999999998 77766542110 122322 2232
Q ss_pred CCCCCCCCCcccEEEECCccchhccCC--CchHHHHHHHHHHHHhccCCcEEEEEEcCCch
Q 028385 64 RDMSFFEDESFDAVIDKGTLDSLMCGT--NAPISASQMLGEVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 64 ~~~~~~~~~~fD~Vi~~~~l~~~~~~~--~~~~~~~~~l~~i~r~LkpgG~~~~~~~~~p~ 122 (210)
+.. ..-|+|+..-.-..-..+. ..........+.+.+.|++|..++..+...|.
T Consensus 97 ea~-----~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pg 152 (478)
T 3g79_A 97 SRI-----SELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPG 152 (478)
T ss_dssp GGG-----GGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTT
T ss_pred HHH-----hcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChH
Confidence 212 2458877642211000000 12245677788999999998877655433444
No 485
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=77.44 E-value=8.4 Score=30.28 Aligned_cols=97 Identities=11% Similarity=0.061 Sum_probs=54.6
Q ss_pred CCEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHh---hc--CCCCcEEEEcccCCCCCCCCCcccEEEECC
Q 028385 9 RDTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMK---YE--EIPQLKYLQMDVRDMSFFEDESFDAVIDKG 81 (210)
Q Consensus 9 ~~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~---~~--~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~ 81 (210)
++|+=||+|. +.++..+++.+. +|+.++.++. +..++. .. ......+....+...+......+|+|+..-
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~~--~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilav 79 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRSDY--ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCI 79 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECSTTH--HHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCChH--HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEec
Confidence 5788899885 455555666665 8999999872 444443 11 112222211111111101123689998743
Q ss_pred ccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEEc
Q 028385 82 TLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLITY 118 (210)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~~ 118 (210)
--.. ...+++.+...++++..++.+.-
T Consensus 80 K~~~----------~~~~l~~l~~~l~~~t~Iv~~~n 106 (320)
T 3i83_A 80 KVVE----------GADRVGLLRDAVAPDTGIVLISN 106 (320)
T ss_dssp CCCT----------TCCHHHHHTTSCCTTCEEEEECS
T ss_pred CCCC----------hHHHHHHHHhhcCCCCEEEEeCC
Confidence 3222 24568888889999887766543
No 486
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=77.30 E-value=12 Score=30.15 Aligned_cols=93 Identities=13% Similarity=0.130 Sum_probs=57.8
Q ss_pred CCCEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC---CCC------cEEEEcccCCCCCCCCCcccE
Q 028385 8 TRDTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE---IPQ------LKYLQMDVRDMSFFEDESFDA 76 (210)
Q Consensus 8 ~~~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---~~~------v~~~~~d~~~~~~~~~~~fD~ 76 (210)
.++|.=||+|. +.++..+++.+. +|+..|.+++.++..++.... .+. +.+ ..|..+. -...|+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~ea----~~~aDv 102 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKAS----LEGVTD 102 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHHH----HTTCCE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHHH----HhcCCE
Confidence 46899999875 334444555565 899999999888877664311 122 221 1222111 124688
Q ss_pred EEECCccchhccCCCchHHHHHHHHHHHHhccCCcEEEEE
Q 028385 77 VIDKGTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLI 116 (210)
Q Consensus 77 Vi~~~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~ 116 (210)
|+.. + +......+++++...++++..++.+
T Consensus 103 Vila-----V-----p~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 103 ILIV-----V-----PSFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp EEEC-----C-----CHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EEEC-----C-----CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 8863 2 3356788899999999988776544
No 487
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=77.30 E-value=8.3 Score=29.89 Aligned_cols=94 Identities=17% Similarity=0.181 Sum_probs=56.4
Q ss_pred CCEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccchh
Q 028385 9 RDTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDSL 86 (210)
Q Consensus 9 ~~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~~ 86 (210)
.+|.=||+|. +.++..+++.+. +|++.|.+++.++...+. .+.+ ..+..+. -...|+|+..-.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~-----g~~~-~~~~~~~----~~~aDvvi~~vp---- 68 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAA-----GASA-ARSARDA----VQGADVVISMLP---- 68 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHT-----TCEE-CSSHHHH----HTTCSEEEECCS----
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC-----CCeE-cCCHHHH----HhCCCeEEEECC----
Confidence 4688899886 345555666676 899999999887776653 2221 1122111 123688886321
Q ss_pred ccCCCchHHHHHHHH---HHHHhccCCcEEEEEEcCCch
Q 028385 87 MCGTNAPISASQMLG---EVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 87 ~~~~~~~~~~~~~l~---~i~r~LkpgG~~~~~~~~~p~ 122 (210)
.......++. ++...+++|..++..+...|.
T Consensus 69 -----~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~ 102 (302)
T 2h78_A 69 -----ASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPT 102 (302)
T ss_dssp -----CHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHH
T ss_pred -----CHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHH
Confidence 1134566666 677788888776544433444
No 488
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=77.09 E-value=12 Score=23.92 Aligned_cols=67 Identities=18% Similarity=0.190 Sum_probs=43.1
Q ss_pred CCEEEeCCCCchhHHHH----HHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCC--CCCcccEEEECCc
Q 028385 9 RDTCRRAAPSIVMSEDM----VKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFF--EDESFDAVIDKGT 82 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~l----~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD~Vi~~~~ 82 (210)
.+|+=+|+ |..+..+ .+.+..+|+++|.++..++.... ..+.+...|+.+...+ .-..+|+|+....
T Consensus 6 ~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 6 WNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR-----MGVATKQVDAKDEAGLAKALGGFDAVISAAP 78 (118)
T ss_dssp EEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT-----TTCEEEECCTTCHHHHHHHTTTCSEEEECSC
T ss_pred CeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh-----CCCcEEEecCCCHHHHHHHHcCCCEEEECCC
Confidence 57899998 4444444 34463489999999987766551 4567788887653200 0135899987653
No 489
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=76.91 E-value=5.7 Score=31.61 Aligned_cols=80 Identities=11% Similarity=0.092 Sum_probs=48.0
Q ss_pred chhHHHHHHc-CCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC----C-CCCCcccEEEECCccchhccCCCc
Q 028385 19 IVMSEDMVKD-GYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS----F-FEDESFDAVIDKGTLDSLMCGTNA 92 (210)
Q Consensus 19 G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~----~-~~~~~fD~Vi~~~~l~~~~~~~~~ 92 (210)
|..+..+++. |. +|+++|.++.-++.+++.-. -.++..+-.+.. . .....+|+|+....-
T Consensus 178 G~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~Ga----~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~--------- 243 (349)
T 3pi7_A 178 CKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGA----AHVLNEKAPDFEATLREVMKAEQPRIFLDAVTG--------- 243 (349)
T ss_dssp HHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHTC----SEEEETTSTTHHHHHHHHHHHHCCCEEEESSCH---------
T ss_pred HHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC----CEEEECCcHHHHHHHHHHhcCCCCcEEEECCCC---------
Confidence 5555555555 66 89999999988888875421 122222111111 0 011369999974321
Q ss_pred hHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 93 PISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 93 ~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
. .+....++|+++|.++++.
T Consensus 244 -~----~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 244 -P----LASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp -H----HHHHHHHHSCTTCEEEECC
T ss_pred -h----hHHHHHhhhcCCCEEEEEe
Confidence 1 2366788999999998764
No 490
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=76.80 E-value=13 Score=29.30 Aligned_cols=95 Identities=15% Similarity=0.190 Sum_probs=56.6
Q ss_pred CCCEEEeCCCC-c-hhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCccch
Q 028385 8 TRDTCRRAAPS-I-VMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTLDS 85 (210)
Q Consensus 8 ~~~vLdiGcG~-G-~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l~~ 85 (210)
.++|.=||+|. | .++..+++.+. +|++.|.+++.++...+. .+.+ ..+..+.- ...|+|+..-.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~-----g~~~-~~~~~e~~----~~aDvVi~~vp--- 96 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAAL-----GATI-HEQARAAA----RDADIVVSMLE--- 96 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT-----TCEE-ESSHHHHH----TTCSEEEECCS---
T ss_pred CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC-----CCEe-eCCHHHHH----hcCCEEEEECC---
Confidence 35788899886 3 34455556676 899999999877766543 2322 22222211 23588886422
Q ss_pred hccCCCchHHHHHHHH--HHHHhccCCcEEEEEEcCCch
Q 028385 86 LMCGTNAPISASQMLG--EVSRLLKPGGIYMLITYGDPK 122 (210)
Q Consensus 86 ~~~~~~~~~~~~~~l~--~i~r~LkpgG~~~~~~~~~p~ 122 (210)
.......++. .+...+++|..++-.+-..|.
T Consensus 97 ------~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~ 129 (320)
T 4dll_A 97 ------NGAVVQDVLFAQGVAAAMKPGSLFLDMASITPR 129 (320)
T ss_dssp ------SHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHH
T ss_pred ------CHHHHHHHHcchhHHhhCCCCCEEEecCCCCHH
Confidence 1134555565 677778888877555544444
No 491
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=76.78 E-value=11 Score=28.40 Aligned_cols=74 Identities=14% Similarity=0.209 Sum_probs=50.6
Q ss_pred CCEEEeCC-CCch---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCC--CCcEEEEcccCCCCC----C-----CCCc
Q 028385 9 RDTCRRAA-PSIV---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEI--PQLKYLQMDVRDMSF----F-----EDES 73 (210)
Q Consensus 9 ~~vLdiGc-G~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~----~-----~~~~ 73 (210)
..+|=.|+ |.|. ++..+++.+. +|+.+|.++..++...+..... .++.++.+|+.+... + .-+.
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 101 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGR 101 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCC
Confidence 35777777 5543 4455566676 8999999998877776665332 478999999987430 0 0136
Q ss_pred ccEEEECCcc
Q 028385 74 FDAVIDKGTL 83 (210)
Q Consensus 74 fD~Vi~~~~l 83 (210)
.|+++.+...
T Consensus 102 id~li~~Ag~ 111 (266)
T 3o38_A 102 LDVLVNNAGL 111 (266)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCc
Confidence 8999987664
No 492
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=76.50 E-value=3.7 Score=32.65 Aligned_cols=89 Identities=9% Similarity=0.012 Sum_probs=55.9
Q ss_pred CCCEEEeCC-C-CchhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCC-----CCCCCcccEEEEC
Q 028385 8 TRDTCRRAA-P-SIVMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMS-----FFEDESFDAVIDK 80 (210)
Q Consensus 8 ~~~vLdiGc-G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~-----~~~~~~fD~Vi~~ 80 (210)
..+||-+|+ | .|..+..+++....+|+++ .++.-++.+++.- ...+. +-.+.. ......+|+|+..
T Consensus 151 g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lG-----a~~i~-~~~~~~~~~~~~~~~~g~D~vid~ 223 (343)
T 3gaz_A 151 GQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLG-----ATPID-ASREPEDYAAEHTAGQGFDLVYDT 223 (343)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHT-----SEEEE-TTSCHHHHHHHHHTTSCEEEEEES
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcC-----CCEec-cCCCHHHHHHHHhcCCCceEEEEC
Confidence 357999995 3 3677777776533389999 8888888876643 12222 211111 0123479999974
Q ss_pred CccchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 81 GTLDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 81 ~~l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
.. ...+....+.|+++|.++.+.
T Consensus 224 ~g--------------~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 224 LG--------------GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp SC--------------THHHHHHHHHEEEEEEEEESC
T ss_pred CC--------------cHHHHHHHHHHhcCCeEEEEc
Confidence 22 135777888999999987653
No 493
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=76.31 E-value=11 Score=28.61 Aligned_cols=74 Identities=11% Similarity=0.099 Sum_probs=50.4
Q ss_pred CCEEEeCCCCch---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCcEEEEcccCCCCC----C-----CCCccc
Q 028385 9 RDTCRRAAPSIV---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSF----F-----EDESFD 75 (210)
Q Consensus 9 ~~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~v~~~~~d~~~~~~----~-----~~~~fD 75 (210)
..+|=.|++.|. ++..+++.|. +|+.+|.++..++...+.... ..++.++.+|+.+... + .-+..|
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 90 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVD 90 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCS
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCc
Confidence 457888876653 3455556676 899999999887776665532 2578899999988430 0 124689
Q ss_pred EEEECCcc
Q 028385 76 AVIDKGTL 83 (210)
Q Consensus 76 ~Vi~~~~l 83 (210)
+++.+...
T Consensus 91 ~lv~nAg~ 98 (264)
T 3ucx_A 91 VVINNAFR 98 (264)
T ss_dssp EEEECCCS
T ss_pred EEEECCCC
Confidence 99987643
No 494
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=76.09 E-value=7.7 Score=29.01 Aligned_cols=74 Identities=15% Similarity=0.154 Sum_probs=50.1
Q ss_pred CCEEEeCCCCc---hhHHHHHHcCCCcEEEEeCCHHHHHHHHHhhcC-CCCcEEEEcccCCCCC----C-----CCCccc
Q 028385 9 RDTCRRAAPSI---VMSEDMVKDGYEDIVNIDISSVAIDMMKMKYEE-IPQLKYLQMDVRDMSF----F-----EDESFD 75 (210)
Q Consensus 9 ~~vLdiGcG~G---~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~v~~~~~d~~~~~~----~-----~~~~fD 75 (210)
..+|=.|++.| .++..+++.+. +|+.+|.++..++...+.... ..++.++.+|+.+... + .-+..|
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 88 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGID 88 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 35777787655 34445555676 799999999887776665532 3578899999987430 0 013689
Q ss_pred EEEECCcc
Q 028385 76 AVIDKGTL 83 (210)
Q Consensus 76 ~Vi~~~~l 83 (210)
+++.+...
T Consensus 89 ~li~~Ag~ 96 (253)
T 3qiv_A 89 YLVNNAAI 96 (253)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99987654
No 495
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=75.65 E-value=7.9 Score=30.32 Aligned_cols=95 Identities=9% Similarity=0.002 Sum_probs=52.7
Q ss_pred CCEEEeCCCC--chhHHHHHHcCCCcEEEEeCCHHHHHHHHHhh---cC-CCCcEEEEcccCCCCCCCCCcccEEEECCc
Q 028385 9 RDTCRRAAPS--IVMSEDMVKDGYEDIVNIDISSVAIDMMKMKY---EE-IPQLKYLQMDVRDMSFFEDESFDAVIDKGT 82 (210)
Q Consensus 9 ~~vLdiGcG~--G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~---~~-~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~ 82 (210)
++|+=||+|. +.++..+++.+. +|+.++.++ .+..++.- .. .....+....+...+ -.-..+|+|+..--
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~-~~~~~~D~vilavk 78 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAP-EEIGPMDLVLVGLK 78 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCH-HHHCCCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCH-HHcCCCCEEEEecC
Confidence 5788999986 455555666665 899999987 34443321 00 011111000010111 01236899886433
Q ss_pred cchhccCCCchHHHHHHHHHHHHhccCCcEEEEEE
Q 028385 83 LDSLMCGTNAPISASQMLGEVSRLLKPGGIYMLIT 117 (210)
Q Consensus 83 l~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~~~~ 117 (210)
- .....+++.+...++++..++.+.
T Consensus 79 ~----------~~~~~~l~~l~~~l~~~~~iv~l~ 103 (312)
T 3hn2_A 79 T----------FANSRYEELIRPLVEEGTQILTLQ 103 (312)
T ss_dssp G----------GGGGGHHHHHGGGCCTTCEEEECC
T ss_pred C----------CCcHHHHHHHHhhcCCCCEEEEec
Confidence 2 334577888999999998775554
No 496
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=75.37 E-value=5.7 Score=30.49 Aligned_cols=71 Identities=18% Similarity=0.236 Sum_probs=44.8
Q ss_pred CCEEEeCCCCch---hHHHHHHcCCCcEEEEeCCHHHHHHHHHhhc--CCCCcEEEEcccCCCCC---C-C-----CCcc
Q 028385 9 RDTCRRAAPSIV---MSEDMVKDGYEDIVNIDISSVAIDMMKMKYE--EIPQLKYLQMDVRDMSF---F-E-----DESF 74 (210)
Q Consensus 9 ~~vLdiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~v~~~~~d~~~~~~---~-~-----~~~f 74 (210)
.+||=.|++.|. ++..+++.|. +|++++.++..++...+... ...++.++.+|+.+... + . -+..
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 107 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGL 107 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 457777765542 2333445576 89999999887766554432 11367889999887420 0 0 1368
Q ss_pred cEEEEC
Q 028385 75 DAVIDK 80 (210)
Q Consensus 75 D~Vi~~ 80 (210)
|+++.+
T Consensus 108 D~li~n 113 (286)
T 1xu9_A 108 DMLILN 113 (286)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 999977
No 497
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=75.34 E-value=13 Score=27.50 Aligned_cols=73 Identities=11% Similarity=0.123 Sum_probs=47.2
Q ss_pred CCEEEeCCCCchhHHH----HHHcCCCcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCC----CC-----CCccc
Q 028385 9 RDTCRRAAPSIVMSED----MVKDGYEDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSF----FE-----DESFD 75 (210)
Q Consensus 9 ~~vLdiGcG~G~~~~~----l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~----~~-----~~~fD 75 (210)
..||=.|+.. .++.. +++.+. +|+.++.++...+...+......++.++.+|+.+... +. -+.+|
T Consensus 7 k~vlVtGasg-giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (251)
T 1zk4_A 7 KVAIITGGTL-GIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp CEEEETTTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred cEEEEeCCCC-hHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4577777654 44444 444566 8999999988776655555433578899999887420 00 13589
Q ss_pred EEEECCcc
Q 028385 76 AVIDKGTL 83 (210)
Q Consensus 76 ~Vi~~~~l 83 (210)
+|+.+...
T Consensus 85 ~li~~Ag~ 92 (251)
T 1zk4_A 85 TLVNNAGI 92 (251)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99987654
No 498
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=74.90 E-value=1.9 Score=33.74 Aligned_cols=27 Identities=22% Similarity=0.532 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhccCCcEEEEEEcCC
Q 028385 94 ISASQMLGEVSRLLKPGGIYMLITYGD 120 (210)
Q Consensus 94 ~~~~~~l~~i~r~LkpgG~~~~~~~~~ 120 (210)
..++..|..+.++|+|||++.+++|.+
T Consensus 210 ~~L~~~L~~a~~~L~~gGrl~visfHS 236 (285)
T 1wg8_A 210 NALKEFLEQAAEVLAPGGRLVVIAFHS 236 (285)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEECSH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCc
Confidence 678899999999999999999999875
No 499
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=74.64 E-value=4.5 Score=30.48 Aligned_cols=87 Identities=16% Similarity=0.265 Sum_probs=51.2
Q ss_pred CCEEEeCCCC--chhHHHHHHcCC---CcEEEEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEECCcc
Q 028385 9 RDTCRRAAPS--IVMSEDMVKDGY---EDIVNIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDKGTL 83 (210)
Q Consensus 9 ~~vLdiGcG~--G~~~~~l~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~~~l 83 (210)
.+|.=||||. +.++..+.+.+. .+|+..|.+++.++...+.. ++.+ ..|..+. -...|+|+..-.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~----g~~~-~~~~~e~----~~~aDvVilav~- 72 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY----GLTT-TTDNNEV----AKNADILILSIK- 72 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH----CCEE-CSCHHHH----HHHCSEEEECSC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh----CCEE-eCChHHH----HHhCCEEEEEeC-
Confidence 4788898875 344455555554 37999999998887776543 1221 1121111 124688886432
Q ss_pred chhccCCCchHHHHHHHHHHHHhccCCcEEE
Q 028385 84 DSLMCGTNAPISASQMLGEVSRLLKPGGIYM 114 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~i~r~LkpgG~~~ 114 (210)
......+++++...+++|..++
T Consensus 73 ---------~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 73 ---------PDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp ---------TTTHHHHC---CCSSCTTCEEE
T ss_pred ---------HHHHHHHHHHHHhhcCCCCEEE
Confidence 2456777888888888887664
No 500
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=74.43 E-value=13 Score=29.55 Aligned_cols=67 Identities=6% Similarity=-0.025 Sum_probs=39.7
Q ss_pred CCCCEEEeCCCC-ch--hHHHHHHcCCCcEE-EEeCCHHHHHHHHHhhcCCCCcEEEEcccCCCCCCCCCcccEEEEC
Q 028385 7 GTRDTCRRAAPS-IV--MSEDMVKDGYEDIV-NIDISSVAIDMMKMKYEEIPQLKYLQMDVRDMSFFEDESFDAVIDK 80 (210)
Q Consensus 7 ~~~~vLdiGcG~-G~--~~~~l~~~~~~~v~-~vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Vi~~ 80 (210)
...+|.=||||. |. ....+.+.+..+++ .+|.+++..+...+++ ++... .|..++ +.+...|+|+..
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~----g~~~~-~~~~~l--l~~~~~D~V~i~ 96 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERF----GGEPV-EGYPAL--LERDDVDAVYVP 96 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHH----CSEEE-ESHHHH--HTCTTCSEEEEC
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHc----CCCCc-CCHHHH--hcCCCCCEEEEC
Confidence 346799999985 33 33445555443665 5599987766655554 23333 555554 234568887764
Done!