Query 028389
Match_columns 209
No_of_seqs 181 out of 599
Neff 5.9
Searched_HMMs 46136
Date Fri Mar 29 10:45:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028389.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028389hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2922 Uncharacterized conser 100.0 1.5E-54 3.3E-59 384.8 7.1 206 2-207 2-215 (335)
2 PF05653 Mg_trans_NIPA: Magnes 100.0 5.8E-47 1.3E-51 337.3 12.5 194 13-206 1-200 (300)
3 PRK02971 4-amino-4-deoxy-L-ara 98.8 1.3E-08 2.9E-13 80.8 6.9 115 19-134 2-122 (129)
4 COG2510 Predicted membrane pro 98.6 1E-07 2.2E-12 76.1 7.5 112 21-133 5-138 (140)
5 PF10639 UPF0546: Uncharacteri 98.6 5E-08 1.1E-12 76.1 4.9 106 28-133 5-113 (113)
6 PRK15051 4-amino-4-deoxy-L-ara 98.5 3E-07 6.6E-12 71.1 7.5 100 24-132 6-107 (111)
7 PF13536 EmrE: Multidrug resis 98.5 2.7E-07 6E-12 70.6 6.0 69 68-137 41-109 (113)
8 PRK10532 threonine and homoser 98.2 4.6E-06 1E-10 73.4 7.0 123 18-140 147-287 (293)
9 TIGR03340 phn_DUF6 phosphonate 98.1 5.1E-06 1.1E-10 72.6 6.2 114 21-134 3-135 (281)
10 TIGR00950 2A78 Carboxylate/Ami 98.0 3.6E-05 7.8E-10 65.4 9.3 114 16-129 125-259 (260)
11 PLN00411 nodulin MtN21 family 97.9 3.8E-05 8.2E-10 70.4 7.8 126 14-139 184-333 (358)
12 PRK10452 multidrug efflux syst 97.8 4.6E-05 1E-09 60.0 5.2 76 64-139 32-108 (120)
13 PF00892 EamA: EamA-like trans 97.8 2.6E-05 5.6E-10 58.1 3.6 68 65-132 57-124 (126)
14 TIGR03340 phn_DUF6 phosphonate 97.6 0.00012 2.7E-09 63.8 6.6 113 19-131 144-280 (281)
15 PRK11689 aromatic amino acid e 97.6 0.00016 3.5E-09 63.7 6.8 115 17-132 154-285 (295)
16 PRK09541 emrE multidrug efflux 97.6 0.00039 8.5E-09 53.9 8.1 77 61-137 28-106 (110)
17 PRK15430 putative chlorampheni 97.6 0.00015 3.3E-09 63.9 6.4 117 16-133 5-144 (296)
18 TIGR00950 2A78 Carboxylate/Ami 97.5 0.0001 2.2E-09 62.7 4.6 70 66-135 51-120 (260)
19 PRK11453 O-acetylserine/cystei 97.5 0.00057 1.2E-08 60.3 8.7 114 18-132 142-285 (299)
20 PRK11272 putative DMT superfam 97.4 0.0004 8.7E-09 61.0 6.9 117 17-133 148-284 (292)
21 PF06027 DUF914: Eukaryotic pr 97.4 0.00028 6.2E-09 64.4 5.8 77 60-136 75-153 (334)
22 PRK11689 aromatic amino acid e 97.2 0.0012 2.6E-08 58.2 7.5 114 20-134 5-137 (295)
23 PF00893 Multi_Drug_Res: Small 97.2 0.0018 4E-08 48.3 7.3 65 61-125 27-93 (93)
24 PF04142 Nuc_sug_transp: Nucle 97.2 0.00061 1.3E-08 59.4 5.4 73 67-139 22-94 (244)
25 PRK11453 O-acetylserine/cystei 97.2 0.0014 2.9E-08 57.9 7.6 113 22-134 7-132 (299)
26 COG0697 RhaT Permeases of the 97.1 0.0015 3.3E-08 55.2 7.2 117 17-134 152-287 (292)
27 TIGR00776 RhaT RhaT L-rhamnose 97.1 0.00098 2.1E-08 59.0 5.7 75 62-136 56-138 (290)
28 TIGR00688 rarD rarD protein. T 97.0 0.00065 1.4E-08 58.3 3.9 62 72-133 80-141 (256)
29 TIGR00776 RhaT RhaT L-rhamnose 96.9 0.0032 6.9E-08 55.8 7.1 113 17-133 150-287 (290)
30 COG0697 RhaT Permeases of the 96.8 0.0024 5.2E-08 54.0 5.4 73 67-139 75-148 (292)
31 TIGR00817 tpt Tpt phosphate/ph 96.7 0.003 6.6E-08 55.5 5.6 66 66-132 70-135 (302)
32 PF08449 UAA: UAA transporter 96.6 0.0056 1.2E-07 54.2 6.4 77 65-141 67-143 (303)
33 PRK10650 multidrug efflux syst 96.5 0.02 4.4E-07 44.3 8.4 73 60-132 32-106 (109)
34 PRK15430 putative chlorampheni 96.4 0.0023 5.1E-08 56.4 2.8 63 73-135 224-286 (296)
35 PRK11431 multidrug efflux syst 96.4 0.0065 1.4E-07 46.7 4.8 72 61-132 27-100 (105)
36 PTZ00343 triose or hexose phos 96.3 0.0052 1.1E-07 55.9 4.7 59 75-133 127-185 (350)
37 PF06800 Sugar_transport: Suga 96.3 0.009 1.9E-07 53.2 6.0 80 63-142 43-130 (269)
38 KOG4510 Permease of the drug/m 96.3 0.0028 6E-08 56.8 2.5 130 2-133 17-168 (346)
39 PF06027 DUF914: Eukaryotic pr 96.2 0.013 2.9E-07 53.5 6.7 128 12-141 161-312 (334)
40 PLN00411 nodulin MtN21 family 96.0 0.015 3.3E-07 53.4 6.2 60 75-134 91-156 (358)
41 PRK11272 putative DMT superfam 96.0 0.01 2.3E-07 52.1 4.9 66 67-133 74-140 (292)
42 TIGR00817 tpt Tpt phosphate/ph 95.9 0.0083 1.8E-07 52.7 3.9 116 17-132 143-291 (302)
43 PF03151 TPT: Triose-phosphate 95.4 0.069 1.5E-06 41.7 7.0 57 75-131 94-150 (153)
44 COG2076 EmrE Membrane transpor 95.4 0.022 4.7E-07 44.1 3.9 71 62-132 29-101 (106)
45 TIGR00803 nst UDP-galactose tr 94.6 0.11 2.4E-06 43.6 6.6 118 14-131 80-221 (222)
46 COG5006 rhtA Threonine/homoser 94.6 0.27 5.8E-06 43.9 8.9 121 16-139 145-287 (292)
47 KOG2765 Predicted membrane pro 94.5 0.14 3.1E-06 47.7 7.3 74 67-140 161-237 (416)
48 PF06800 Sugar_transport: Suga 94.1 0.15 3.3E-06 45.4 6.6 118 14-131 133-268 (269)
49 PRK13499 rhamnose-proton sympo 94.0 0.033 7.1E-07 51.2 2.2 122 14-137 2-156 (345)
50 PRK10532 threonine and homoser 93.1 0.49 1.1E-05 41.6 8.1 112 16-134 9-137 (293)
51 COG2962 RarD Predicted permeas 92.9 0.14 3.1E-06 46.1 4.3 121 17-137 5-147 (293)
52 PF08449 UAA: UAA transporter 92.5 0.48 1E-05 41.9 7.2 120 12-131 147-294 (303)
53 KOG4831 Unnamed protein [Funct 92.4 0.14 3E-06 40.0 3.2 78 55-133 45-124 (125)
54 KOG3912 Predicted integral mem 92.2 0.3 6.6E-06 44.3 5.4 78 58-135 82-159 (372)
55 KOG2234 Predicted UDP-galactos 91.4 0.23 4.9E-06 45.8 3.9 79 65-143 95-173 (345)
56 PRK02237 hypothetical protein; 90.0 0.73 1.6E-05 35.8 5.0 48 90-138 61-108 (109)
57 PTZ00343 triose or hexose phos 89.6 1.3 2.7E-05 40.4 7.1 50 82-131 296-345 (350)
58 COG1742 Uncharacterized conser 88.8 1.6 3.4E-05 33.9 6.0 49 90-139 60-108 (109)
59 PF04142 Nuc_sug_transp: Nucle 88.2 3.2 7E-05 36.1 8.4 111 14-124 109-243 (244)
60 KOG1441 Glucose-6-phosphate/ph 82.1 2.8 6.2E-05 38.2 5.3 63 72-134 93-155 (316)
61 KOG2765 Predicted membrane pro 81.5 6 0.00013 37.2 7.2 130 6-135 232-391 (416)
62 KOG2766 Predicted membrane pro 80.9 1.2 2.6E-05 40.1 2.4 56 81-136 97-152 (336)
63 PF02694 UPF0060: Uncharacteri 80.6 1.2 2.6E-05 34.6 2.0 46 91-137 60-105 (107)
64 PRK13499 rhamnose-proton sympo 73.6 16 0.00034 33.8 7.6 40 94-134 295-341 (345)
65 COG3169 Uncharacterized protei 68.4 2.6 5.6E-05 32.6 1.1 106 14-132 5-113 (116)
66 PF04342 DUF486: Protein of un 67.6 2.7 5.9E-05 32.6 1.0 35 97-131 71-105 (108)
67 PF06570 DUF1129: Protein of u 63.8 64 0.0014 27.1 8.9 87 20-117 112-204 (206)
68 COG4975 GlcU Putative glucose 61.2 4.4 9.6E-05 36.2 1.3 93 58-150 52-152 (288)
69 PF05653 Mg_trans_NIPA: Magnes 61.0 24 0.00052 31.7 6.1 79 58-136 205-294 (300)
70 COG4975 GlcU Putative glucose 57.5 1.3 2.9E-05 39.4 -2.5 62 73-134 220-285 (288)
71 KOG4314 Predicted carbohydrate 54.7 22 0.00047 31.1 4.4 61 76-136 67-127 (290)
72 KOG1442 GDP-fucose transporter 51.4 4.7 0.0001 36.7 -0.2 59 72-130 112-170 (347)
73 KOG1581 UDP-galactose transpor 46.1 1.6E+02 0.0034 27.2 8.7 69 71-139 92-160 (327)
74 KOG1583 UDP-N-acetylglucosamin 41.0 27 0.00058 31.9 3.0 78 64-141 66-144 (330)
75 COG1008 NuoM NADH:ubiquinone o 39.6 93 0.002 30.3 6.5 79 26-113 339-430 (497)
76 PF04657 DUF606: Protein of un 36.2 73 0.0016 25.2 4.6 32 99-130 102-137 (138)
77 PF04531 Phage_holin_1: Bacter 31.5 89 0.0019 22.8 4.0 16 59-74 7-22 (84)
78 KOG1638 Steroid reductase [Lip 31.3 1.6E+02 0.0034 26.3 6.1 59 14-82 108-166 (257)
79 PRK08541 flagellin; Validated 30.7 44 0.00094 28.9 2.6 21 21-41 19-39 (211)
80 COG4858 Uncharacterized membra 30.0 3.7E+02 0.008 23.3 9.2 58 61-118 157-220 (226)
81 TIGR00688 rarD rarD protein. T 28.5 1.1E+02 0.0025 25.7 4.8 38 72-109 218-255 (256)
82 KOG2234 Predicted UDP-galactos 26.3 5.4E+02 0.012 24.0 9.6 120 12-132 176-320 (345)
83 KOG1583 UDP-N-acetylglucosamin 26.2 98 0.0021 28.3 4.1 33 100-132 280-312 (330)
84 PF06609 TRI12: Fungal trichot 25.0 25 0.00053 34.9 0.1 24 111-134 233-256 (599)
85 PF04117 Mpv17_PMP22: Mpv17 / 24.8 2.2E+02 0.0047 19.4 4.9 51 59-109 15-66 (68)
86 KOG4510 Permease of the drug/m 24.6 67 0.0014 29.4 2.7 133 16-149 188-340 (346)
87 PF08173 YbgT_YccB: Membrane b 23.6 1.2E+02 0.0027 17.9 2.9 19 16-34 5-23 (28)
88 MTH00033 CYTB cytochrome b; Pr 22.3 4.6E+02 0.01 24.6 7.9 44 58-108 103-146 (383)
89 PRK11469 hypothetical protein; 22.1 3.9E+02 0.0084 22.3 6.8 14 119-132 169-182 (188)
90 COG2245 Predicted membrane pro 21.4 5E+02 0.011 22.0 7.1 40 7-46 87-128 (182)
No 1
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=1.5e-54 Score=384.81 Aligned_cols=206 Identities=68% Similarity=1.111 Sum_probs=192.1
Q ss_pred CCCCCCcccc--CCCCchhHHHHHHHHHHHHHHHHHHHHHhhHHHhhccCcccCCCCccccchhHHHHHHHHHHHHHHHH
Q 028389 2 ADPNGHSWRD--GMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMVVGEIAN 79 (209)
Q Consensus 2 ~~~~~~~~~~--~~~~~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~~~a~~~~~~~l~~~~W~~G~~l~~lG~~~~ 79 (209)
+.-+|..|++ ++++++++|+.||+.||+++|.++++|||+++|.++.+.|+++++++|++.|+||+|++.|++||++|
T Consensus 2 ~~~sg~~~~~~~~~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~ra~~gg~~yl~~~~Ww~G~ltm~vGei~N 81 (335)
T KOG2922|consen 2 ASSSGSWRDEMKRMSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLRAGEGGYGYLKEPLWWAGMLTMIVGEIAN 81 (335)
T ss_pred CCCCcchHHHHhhhccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhcccccCCCcchhhhHHHHHHHHHHHHHhHhh
Confidence 3445555543 46899999999999999999999999999999998888999999999999999999999999999999
Q ss_pred HHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecCCccccCCHHHHHHHhcchhHH-
Q 028389 80 FAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPALV- 158 (209)
Q Consensus 80 f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~~~~~~t~~el~~~~~~p~~v- 158 (209)
|+||+|||+++|+||||+++++|+++|+++|||+++..+++||++|++|++++|+|+|+|++..|.+|+++++++|.|+
T Consensus 82 FaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fli 161 (335)
T KOG2922|consen 82 FAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLV 161 (335)
T ss_pred HHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999943
Q ss_pred -----HHHHHhhheeeeeccCceeeEEeeeeehhccceeeEehhhhhccceeee
Q 028389 159 -----ITAVFILIFHYIPQYGQTHIMVYIGVCSLVGSLSVCILHTGTGNFVIAI 207 (209)
Q Consensus 159 -----~~~~l~l~~~~~~r~g~~~~lvyi~icsl~gs~tVl~~K~~s~~~~~~~ 207 (209)
+.+..++++++.||+|++|+++|+++||++||+||+++|++++|+.+|+
T Consensus 162 y~~~iil~~~il~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~ 215 (335)
T KOG2922|consen 162 YVIIIILIVLILIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTF 215 (335)
T ss_pred HHHHHHHHHHHHheeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHh
Confidence 3456677888899999999999999999999999999999999998764
No 2
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=100.00 E-value=5.8e-47 Score=337.32 Aligned_cols=194 Identities=43% Similarity=0.767 Sum_probs=179.6
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhhHHHhhccCcccCCCCccccchhHHHHHHHHHHHHHHHHHHHHhhccchhhh
Q 028389 13 MSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVT 92 (209)
Q Consensus 13 ~~~~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~~~a~~~~~~~l~~~~W~~G~~l~~lG~~~~f~Al~fap~slV~ 92 (209)
+++++++|+.+|++||+++++|+++|||+++|+++++.|+++++++|+|||+||+|+.+|++|+++|+.||+|||+++||
T Consensus 1 ~~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~~~~l~~~~W~~G~~~~~~g~~~~~~Al~~ap~slv~ 80 (300)
T PF05653_consen 1 MNTDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGGRSYLRRPLWWIGLLLMVLGEILNFVALGFAPASLVA 80 (300)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHhhHHHHHHHHHHhcchHHHHHHHHhhhHHHHH
Confidence 46889999999999999999999999999999888666666678899999999999999999999999999999999999
Q ss_pred cchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecCCccccCCHHHHHHHhcchhHH------HHHHHhhh
Q 028389 93 PLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVWNLATEPALV------ITAVFILI 166 (209)
Q Consensus 93 PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~~~~~~t~~el~~~~~~p~~v------~~~~l~l~ 166 (209)
|+|++++++|++++++++|||++++|+.|+++|+.|+++++.++|++++++|.+|+.+++++|.++ .....+++
T Consensus 81 Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~fl~y~~~~~~~~~~L~ 160 (300)
T PF05653_consen 81 PLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPGFLVYFILVLVLILILI 160 (300)
T ss_pred HHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcceehhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999832 23344566
Q ss_pred eeeeeccCceeeEEeeeeehhccceeeEehhhhhccceee
Q 028389 167 FHYIPQYGQTHIMVYIGVCSLVGSLSVCILHTGTGNFVIA 206 (209)
Q Consensus 167 ~~~~~r~g~~~~lvyi~icsl~gs~tVl~~K~~s~~~~~~ 206 (209)
++..||+|++|+++|+++||++||+||+++|++++++..+
T Consensus 161 ~~~~~r~g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~ 200 (300)
T PF05653_consen 161 FFIKPRYGRRNILVYISICSLIGSFTVLSAKAISILIKLT 200 (300)
T ss_pred HhhcchhcccceEEEEEEeccccchhhhHHHHHHHHHHHH
Confidence 6778899999999999999999999999999999887654
No 3
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.80 E-value=1.3e-08 Score=80.84 Aligned_cols=115 Identities=17% Similarity=0.133 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHhhccCcccCCC--Cccccchh--HHHHHHHHHHHHHHHHHHHHhhccchhhhcc
Q 028389 19 KGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFG--GYSYLYEP--LWWVGMITMVVGEIANFAAYAFAPAILVTPL 94 (209)
Q Consensus 19 iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~~~a~~~--~~~~l~~~--~W~~G~~l~~lG~~~~f~Al~fap~slV~PL 94 (209)
+|..+.+.+.++.+.|-.+-|+|..+.++.+... .+ ......+| .-+.|+..++++...+..++...|++...|+
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~-~~~~~~~~~~~p~~~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~ 80 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAW-DFIAALLAFGLALRAVLLGLAGYALSMLCWLKALRYLPLSRAYPL 80 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchh-HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHH
Confidence 4678888999999999999999988765422111 00 00123456 6689999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHH--HhhcccccccchhhhHheeceeeeEe
Q 028389 95 GALSIIISAALAHI--ILRERLHIFGILGCILCVVGSTTIVL 134 (209)
Q Consensus 95 ga~~lv~~~ila~~--~L~E~l~~~~~~G~~l~i~G~~lvv~ 134 (209)
-+...+...+.+.. ++||+++.+++.|++++++|++++..
T Consensus 81 ~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 81 LSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL 122 (129)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 99998888888885 79999999999999999999988743
No 4
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.64 E-value=1e-07 Score=76.06 Aligned_cols=112 Identities=27% Similarity=0.380 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHhhcc---Cccc--------------CCC-CccccchhHHH----HHHHHHHHHHHH
Q 028389 21 LILALSSSIFIGSSFIVKKKGLKKAGAS---GVRA--------------GFG-GYSYLYEPLWW----VGMITMVVGEIA 78 (209)
Q Consensus 21 i~LAl~ss~~i~~g~vlqK~~~~~~~~~---~~~a--------------~~~-~~~~l~~~~W~----~G~~l~~lG~~~ 78 (209)
...|+.|+++.++.-++-|-|+...+.. -.|+ |+- ...-...+.|. .| +.-+++-.+
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSG-la~glswl~ 83 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSG-LAGGLSWLL 83 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHH-HHHHHHHHH
Confidence 4678999999999999999987643221 0111 110 11112223332 34 445677789
Q ss_pred HHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeE
Q 028389 79 NFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIV 133 (209)
Q Consensus 79 ~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv 133 (209)
.|.|+.-.+++.|.|+-..++++..+++..+||||++.+.|+|+.|+++|++++.
T Consensus 84 Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 84 YFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 9999999999999999999999999999999999999999999999999998874
No 5
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=98.61 E-value=5e-08 Score=76.15 Aligned_cols=106 Identities=18% Similarity=0.181 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHhhHHHhhccC-c-ccCCCCccccchhHHHHHHHHHHHHHHHHHHHHhhccchhhhcch-hhhHHHHHH
Q 028389 28 SIFIGSSFIVKKKGLKKAGASG-V-RAGFGGYSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTPLG-ALSIIISAA 104 (209)
Q Consensus 28 s~~i~~g~vlqK~~~~~~~~~~-~-~a~~~~~~~l~~~~W~~G~~l~~lG~~~~f~Al~fap~slV~PLg-a~~lv~~~i 104 (209)
+++.|...-+.|||....++.. . +.-++....++||..++++++.-.|++..+..++-+|.|+.-|+. +++.+++++
T Consensus 5 g~~WG~Tnpfik~g~~~~~~~~~~~~~~~~~~~Ll~n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l 84 (113)
T PF10639_consen 5 GILWGCTNPFIKRGSSGLEKVKASLQLLQEIKFLLLNPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTAL 84 (113)
T ss_pred hHHhcCchHHHHHHHhhcCCccchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHH
Confidence 4566777788888865543321 1 011234467899999999999999999999999999999999995 999999999
Q ss_pred HHHHHhhcccccccchhhhHheeceeeeE
Q 028389 105 LAHIILRERLHIFGILGCILCVVGSTTIV 133 (209)
Q Consensus 105 la~~~L~E~l~~~~~~G~~l~i~G~~lvv 133 (209)
.+.++-+|..+++.+.|+.+++.|+.+.+
T Consensus 85 ~g~~lge~~~~~~~~~G~~Li~~Gv~Lcv 113 (113)
T PF10639_consen 85 TGWLLGEEVISRRTWLGMALILAGVALCV 113 (113)
T ss_pred HHHHhcCcccchhHHHHHHHHHcCeeeeC
Confidence 99777666667788999999999998753
No 6
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.54 E-value=3e-07 Score=71.05 Aligned_cols=100 Identities=12% Similarity=0.175 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHhhccCcccCCCCccccchhHHHHHH--HHHHHHHHHHHHHHhhccchhhhcchhhhHHH
Q 028389 24 ALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGM--ITMVVGEIANFAAYAFAPAILVTPLGALSIII 101 (209)
Q Consensus 24 Al~ss~~i~~g~vlqK~~~~~~~~~~~~a~~~~~~~l~~~~W~~G~--~l~~lG~~~~f~Al~fap~slV~PLga~~lv~ 101 (209)
-+.+.++-..|....|++.++.+. ++ -..++..|.+. ..+.+...+...++...|.+...|+-+++.++
T Consensus 6 l~~ai~~ev~g~~~lK~s~~~~~~-------~~--~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~ 76 (111)
T PRK15051 6 LVFASLLSVAGQLCQKQATRPVAI-------GK--RRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVW 76 (111)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCc-------ch--hhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHH
Confidence 344455556677788886322111 00 01123445555 56788889999999999999999999999999
Q ss_pred HHHHHHHHhhcccccccchhhhHheeceeee
Q 028389 102 SAALAHIILRERLHIFGILGCILCVVGSTTI 132 (209)
Q Consensus 102 ~~ila~~~L~E~l~~~~~~G~~l~i~G~~lv 132 (209)
+.+++.+++|||++++++.|+++++.|++++
T Consensus 77 ~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 77 VTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998765
No 7
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.49 E-value=2.7e-07 Score=70.55 Aligned_cols=69 Identities=29% Similarity=0.410 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecC
Q 028389 68 GMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAP 137 (209)
Q Consensus 68 G~~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~ 137 (209)
|.+...++..+.+.|+.++| ..++|+.+++.+++++++..++|||++++++.|++++.+|++++.....
T Consensus 41 g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 41 GLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 44555578899999999999 5999999999999999999999999999999999999999988755443
No 8
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.17 E-value=4.6e-06 Score=73.43 Aligned_cols=123 Identities=17% Similarity=0.118 Sum_probs=92.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhHHHhhccCc---c-----------cCCCCccccchh----HHHHHHHHHHHHHHHH
Q 028389 18 IKGLILALSSSIFIGSSFIVKKKGLKKAGASGV---R-----------AGFGGYSYLYEP----LWWVGMITMVVGEIAN 79 (209)
Q Consensus 18 ~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~~---~-----------a~~~~~~~l~~~----~W~~G~~l~~lG~~~~ 79 (209)
.+|..+++.++++.+...++.||-..+.+.... . ..++........ .++.|+...+++...+
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l~ 226 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSLE 226 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999988875322111000 0 001111111111 2456677777888899
Q ss_pred HHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecCCcc
Q 028389 80 FAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAER 140 (209)
Q Consensus 80 f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~~~ 140 (209)
+.++...|++.++++..+..+++.+++.+++||+++..++.|.++++.|+.......++|.
T Consensus 227 ~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~ 287 (293)
T PRK10532 227 MIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREP 287 (293)
T ss_pred HHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999999999999999999999999999999988765555543
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.12 E-value=5.1e-06 Score=72.56 Aligned_cols=114 Identities=24% Similarity=0.244 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHhhcc-Ccc----c--------C---CCCccccchhHHH---HHHHHHHHHHHHHHH
Q 028389 21 LILALSSSIFIGSSFIVKKKGLKKAGAS-GVR----A--------G---FGGYSYLYEPLWW---VGMITMVVGEIANFA 81 (209)
Q Consensus 21 i~LAl~ss~~i~~g~vlqK~~~~~~~~~-~~~----a--------~---~~~~~~l~~~~W~---~G~~l~~lG~~~~f~ 81 (209)
..+.+.++++.+....++||...++..- ... + . +...+..++..|+ .+......+..+.+.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPDFLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQ 82 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 4677888888888888888654432210 000 0 0 0111111222221 233345566778888
Q ss_pred HHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEe
Q 028389 82 AYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVL 134 (209)
Q Consensus 82 Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~ 134 (209)
++...|++..+|+...+.++.++++..++|||+++++|.|+.+++.|+.++..
T Consensus 83 a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 83 AYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999987653
No 10
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.01 E-value=3.6e-05 Score=65.42 Aligned_cols=114 Identities=20% Similarity=0.232 Sum_probs=86.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhHHHhhccC---c--cc------------CCCCccccchhHHH----HHHHHHHH
Q 028389 16 DNIKGLILALSSSIFIGSSFIVKKKGLKKAGASG---V--RA------------GFGGYSYLYEPLWW----VGMITMVV 74 (209)
Q Consensus 16 ~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~---~--~a------------~~~~~~~l~~~~W~----~G~~l~~l 74 (209)
....|..+++.++++.+...+++||...+.+... . +. ..++........|+ .|.....+
T Consensus 125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (260)
T TIGR00950 125 INPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTAL 204 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHH
Confidence 3467999999999999999999999654332110 0 00 01111112222332 34444567
Q ss_pred HHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheece
Q 028389 75 GEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGS 129 (209)
Q Consensus 75 G~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~ 129 (209)
+..+++.++...|++.++.+..+..++..+++.+++||+++..++.|+.+++.|+
T Consensus 205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 8889999999999999999999999999999999999999999999999999885
No 11
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=97.90 E-value=3.8e-05 Score=70.43 Aligned_cols=126 Identities=19% Similarity=0.224 Sum_probs=87.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhhHHHhhccCc---c-------------c---CCCCccccch-hHHHHHHHH--
Q 028389 14 SSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGV---R-------------A---GFGGYSYLYE-PLWWVGMIT-- 71 (209)
Q Consensus 14 ~~~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~~---~-------------a---~~~~~~~l~~-~~W~~G~~l-- 71 (209)
..++.+|..+++.|+++.+...++||+-..+-+.... - . ..+....... ..+...++.
T Consensus 184 ~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~ 263 (358)
T PLN00411 184 NSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMA 263 (358)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHH
Confidence 3457889999999999999999999986544211100 0 0 0000111110 111112221
Q ss_pred --HHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecCCc
Q 028389 72 --MVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAE 139 (209)
Q Consensus 72 --~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~~ 139 (209)
..++...+..+....+++.++...-+..+++++++..+++|+++..+++|+++++.|..++.....+|
T Consensus 264 i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~ 333 (358)
T PLN00411 264 IITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANE 333 (358)
T ss_pred HHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 22355667778888999999999999999999999999999999999999999999998875443333
No 12
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.76 E-value=4.6e-05 Score=60.05 Aligned_cols=76 Identities=14% Similarity=0.125 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhhhcc-hhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecCCc
Q 028389 64 LWWVGMITMVVGEIANFAAYAFAPAILVTPL-GALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAE 139 (209)
Q Consensus 64 ~W~~G~~l~~lG~~~~f~Al~fap~slV~PL-ga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~~ 139 (209)
.|+..+.++++...+...|+...|.++.-|+ .+++.+...+.+.+++||+++..++.|+.+++.|++.+-..+++.
T Consensus 32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~~ 108 (120)
T PRK10452 32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRKA 108 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 3566677788888888899999999999999 689999999999999999999999999999999998886555443
No 13
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.76 E-value=2.6e-05 Score=58.15 Aligned_cols=68 Identities=28% Similarity=0.430 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeee
Q 028389 65 WWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI 132 (209)
Q Consensus 65 W~~G~~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lv 132 (209)
...|.+...++..+.+.++...|++.++++..++.+++.+++..++||+++++++.|+.+++.|+.++
T Consensus 57 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 57 LFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred hHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 34555556788899999999999999999999999999999999999999999999999999998764
No 14
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.64 E-value=0.00012 Score=63.83 Aligned_cols=113 Identities=19% Similarity=0.140 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHhhccC-c-c--c-----C-----------CCCccccchhHH----HHHHHHHHH
Q 028389 19 KGLILALSSSIFIGSSFIVKKKGLKKAGASG-V-R--A-----G-----------FGGYSYLYEPLW----WVGMITMVV 74 (209)
Q Consensus 19 iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~-~-~--a-----~-----------~~~~~~l~~~~W----~~G~~l~~l 74 (209)
-|..+++.++++.+...++.|+...+.+... . . . . ++.......+.| +.+.....+
T Consensus 144 ~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l 223 (281)
T TIGR03340 144 KAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIGG 223 (281)
T ss_pred hHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHH
Confidence 4677889999999998888887432211100 0 0 0 0 000000111122 233344557
Q ss_pred HHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceee
Q 028389 75 GEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTT 131 (209)
Q Consensus 75 G~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~l 131 (209)
+...++.++...|++.+.++.-++.++..+++.+++||+++..++.|.++++.|+.+
T Consensus 224 ~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 224 AYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 788889999999999999999999999999999999999999999999999999764
No 15
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.60 E-value=0.00016 Score=63.74 Aligned_cols=115 Identities=17% Similarity=0.068 Sum_probs=84.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHhhccCcc------------cCCCCccccchh-HHH----HHHHHHHHHHHHH
Q 028389 17 NIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVR------------AGFGGYSYLYEP-LWW----VGMITMVVGEIAN 79 (209)
Q Consensus 17 ~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~~~------------a~~~~~~~l~~~-~W~----~G~~l~~lG~~~~ 79 (209)
...|..+++.++++.+.+.++.||-..+.+..... .-++....--++ .|+ .| ...+++..++
T Consensus 154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-~~t~~~~~l~ 232 (295)
T PRK11689 154 NPLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFFILTALALWIKYFLSPQPAMVFSLPAIIKLLLAA-AAMGFGYAAW 232 (295)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHH-HHHHHHHHHH
Confidence 35799999999999999999999943221110000 000111111122 221 22 2245677788
Q ss_pred HHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeee
Q 028389 80 FAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI 132 (209)
Q Consensus 80 f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lv 132 (209)
+.++...|++.++++..+..+++.+++..++||+++..+++|+++++.|+.+.
T Consensus 233 ~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~ 285 (295)
T PRK11689 233 NVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC 285 (295)
T ss_pred HHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999998766
No 16
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.60 E-value=0.00039 Score=53.90 Aligned_cols=77 Identities=17% Similarity=0.181 Sum_probs=64.2
Q ss_pred chhHHH-HHHHHHHHHHHHHHHHHhhccchhhhcc-hhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecC
Q 028389 61 YEPLWW-VGMITMVVGEIANFAAYAFAPAILVTPL-GALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAP 137 (209)
Q Consensus 61 ~~~~W~-~G~~l~~lG~~~~f~Al~fap~slV~PL-ga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~ 137 (209)
+++.|. ..+..+++....--.|+.-.|.++.-|. .+++.+.+.+.+.+++||+++..++.|+.+++.|++.+-..++
T Consensus 28 ~~~~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~~ 106 (110)
T PRK09541 28 TRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLSR 106 (110)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 345553 4555666777777788888999999999 7799999999999999999999999999999999998855544
No 17
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=97.58 E-value=0.00015 Score=63.89 Aligned_cols=117 Identities=17% Similarity=0.104 Sum_probs=87.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhHHHhhcc---Cccc------------CCCCc----cccchhHH----HHHHHHH
Q 028389 16 DNIKGLILALSSSIFIGSSFIVKKKGLKKAGAS---GVRA------------GFGGY----SYLYEPLW----WVGMITM 72 (209)
Q Consensus 16 ~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~---~~~a------------~~~~~----~~l~~~~W----~~G~~l~ 72 (209)
+...|..+.+.++++.+.....-|.. .+.+.. ..|. -+++. ...+++.+ ..|...+
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLI 83 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 55789999999999999999888753 111100 0110 00000 01122332 2555667
Q ss_pred HHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeE
Q 028389 73 VVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIV 133 (209)
Q Consensus 73 ~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv 133 (209)
.+...+.+.++...|++..+-+.....++.++++.+++|||+++++|.|+++...|+.++.
T Consensus 84 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 84 GGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 7788899999999999999999999999999999999999999999999999999998764
No 18
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.55 E-value=0.0001 Score=62.68 Aligned_cols=70 Identities=19% Similarity=0.212 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEee
Q 028389 66 WVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLH 135 (209)
Q Consensus 66 ~~G~~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~ 135 (209)
..|.....+...+.+.|+.+.|++..+++-++..+++++++..++|||++++++.|+.++++|+.++...
T Consensus 51 ~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~ 120 (260)
T TIGR00950 51 LLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSD 120 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccC
Confidence 4555667788889999999999999999999999999999999999999999999999999999887543
No 19
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.49 E-value=0.00057 Score=60.29 Aligned_cols=114 Identities=21% Similarity=0.226 Sum_probs=82.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhHHHhhccCccc-------------------CCCCc------cccchhH-HH----H
Q 028389 18 IKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRA-------------------GFGGY------SYLYEPL-WW----V 67 (209)
Q Consensus 18 ~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~~~a-------------------~~~~~------~~l~~~~-W~----~ 67 (209)
..|..+++.++++.+...+++||-..+.+...... .++.. ... ++. |+ .
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l 220 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTI-DMTTILSLMYL 220 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccC-CHHHHHHHHHH
Confidence 57999999999999999999998432211100000 00000 011 222 32 3
Q ss_pred HHHHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeee
Q 028389 68 GMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI 132 (209)
Q Consensus 68 G~~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lv 132 (209)
|+...+++...++.++.-.++.-+.++..+..+++.+++.++++|+++..++.|.+++++|+.+.
T Consensus 221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~ 285 (299)
T PRK11453 221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN 285 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence 34445566677777777789999999999999999999999999999999999999999998754
No 20
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.42 E-value=0.0004 Score=61.05 Aligned_cols=117 Identities=13% Similarity=0.009 Sum_probs=85.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHhhccC-cc--------------cCCCCccc-cchhHHH----HHHHHHHHHH
Q 028389 17 NIKGLILALSSSIFIGSSFIVKKKGLKKAGASG-VR--------------AGFGGYSY-LYEPLWW----VGMITMVVGE 76 (209)
Q Consensus 17 ~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~-~~--------------a~~~~~~~-l~~~~W~----~G~~l~~lG~ 76 (209)
...|..+++.++++.+.+.+.+||...+.+... .. ..++.... .....|+ .|....+++.
T Consensus 148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~ 227 (292)
T PRK11272 148 NPWGAILILIASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAI 227 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHH
Confidence 357999999999999999999988422211000 00 00011111 1112232 3444456777
Q ss_pred HHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeE
Q 028389 77 IANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIV 133 (209)
Q Consensus 77 ~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv 133 (209)
.+++.++...|++.+..+..+..+++++++.+++||+++..++.|+++++.|+.+..
T Consensus 228 ~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 228 SAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT 284 (292)
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999999999999999999999999987653
No 21
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.40 E-value=0.00028 Score=64.39 Aligned_cols=77 Identities=27% Similarity=0.455 Sum_probs=65.1
Q ss_pred cchhHHHHHH--HHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeec
Q 028389 60 LYEPLWWVGM--ITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHA 136 (209)
Q Consensus 60 l~~~~W~~G~--~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a 136 (209)
+|+|.|.-=+ ++.+.|......||.+.+.+-+|=|.+.+++++.+++.++||||.++.++.|+.+|+.|..+++...
T Consensus 75 ~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 75 LKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 4555554222 3456777777899999999999999999999999999999999999999999999999988887664
No 22
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.22 E-value=0.0012 Score=58.23 Aligned_cols=114 Identities=16% Similarity=0.163 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHhhcc---Cccc---------CCCCccccch---hHHHHHHHHHHHHHHHHHHHHh
Q 028389 20 GLILALSSSIFIGSSFIVKKKGLKKAGAS---GVRA---------GFGGYSYLYE---PLWWVGMITMVVGEIANFAAYA 84 (209)
Q Consensus 20 Gi~LAl~ss~~i~~g~vlqK~~~~~~~~~---~~~a---------~~~~~~~l~~---~~W~~G~~l~~lG~~~~f~Al~ 84 (209)
+..+++..+++.+..+...|.+....+.- ..|- -.. ++..|+ +....|.+.+.....+.+.++.
T Consensus 5 ~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~ 83 (295)
T PRK11689 5 ATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTVG-FPRLRQFPKRYLLAGGLLFVSYEICLALSLG 83 (295)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHcc-ccccccccHHHHHHHhHHHHHHHHHHHHHHH
Confidence 35567788888888888888764432110 0110 000 111121 1122333334444445556665
Q ss_pred hc----cchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEe
Q 028389 85 FA----PAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVL 134 (209)
Q Consensus 85 fa----p~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~ 134 (209)
++ |+...+-+.+...++..++++.++|||++++++.|+++...|+.++..
T Consensus 84 ~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~ 137 (295)
T PRK11689 84 YANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLG 137 (295)
T ss_pred HhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheec
Confidence 43 555556677888999999999999999999999999999999988764
No 23
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.20 E-value=0.0018 Score=48.27 Aligned_cols=65 Identities=14% Similarity=0.008 Sum_probs=36.5
Q ss_pred chhHHHHHHH-HHHHHHHHHHHHHhhccchhhhcc-hhhhHHHHHHHHHHHhhcccccccchhhhHh
Q 028389 61 YEPLWWVGMI-TMVVGEIANFAAYAFAPAILVTPL-GALSIIISAALAHIILRERLHIFGILGCILC 125 (209)
Q Consensus 61 ~~~~W~~G~~-l~~lG~~~~f~Al~fap~slV~PL-ga~~lv~~~ila~~~L~E~l~~~~~~G~~l~ 125 (209)
+++.|..+.+ .++++..+...|+.-.|.++.-|+ .+++.+...+.+.++.||+++..++.|+.++
T Consensus 27 ~~~~~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 27 TQLIPTILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp -------HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3455555554 577777888889999999999997 5699999999999999999999999999875
No 24
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.20 E-value=0.00061 Score=59.40 Aligned_cols=73 Identities=19% Similarity=0.272 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecCCc
Q 028389 67 VGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAE 139 (209)
Q Consensus 67 ~G~~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~~ 139 (209)
+=-+++.+...+.+.++...|++.-|=+...-++++++++.++||+|+++++|.+..+..+|++++-..+..+
T Consensus 22 vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 22 VPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 3347799999999999999999999999999999999999999999999999999999999999876665554
No 25
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.19 E-value=0.0014 Score=57.87 Aligned_cols=113 Identities=24% Similarity=0.271 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHhhcc---CcccC---CCCcccc---ch---hHHHHHHHHHHHHHHHHHHHHhh-ccc
Q 028389 22 ILALSSSIFIGSSFIVKKKGLKKAGAS---GVRAG---FGGYSYL---YE---PLWWVGMITMVVGEIANFAAYAF-APA 88 (209)
Q Consensus 22 ~LAl~ss~~i~~g~vlqK~~~~~~~~~---~~~a~---~~~~~~l---~~---~~W~~G~~l~~lG~~~~f~Al~f-ap~ 88 (209)
.+++..+++.|..+...|....+.+.. ..|.. --...+. |. ..-..|+..........+.++.+ .|+
T Consensus 7 l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a 86 (299)
T PRK11453 7 VLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNLLLGYGLTISFGQFAFLFCAINFGMPA 86 (299)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 456778899999999999865432211 11210 0000000 11 11122332222333455667776 477
Q ss_pred hhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEe
Q 028389 89 ILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVL 134 (209)
Q Consensus 89 slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~ 134 (209)
...+-+.+...++..+++++++|||++++++.|+++.++|+.++..
T Consensus 87 ~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~ 132 (299)
T PRK11453 87 GLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE 132 (299)
T ss_pred HHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence 7888888899999999999999999999999999999999887753
No 26
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.14 E-value=0.0015 Score=55.21 Aligned_cols=117 Identities=23% Similarity=0.219 Sum_probs=85.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHhhccC-cc--------------cCCCC--ccccchhHHH--HHHHHHHHHHH
Q 028389 17 NIKGLILALSSSIFIGSSFIVKKKGLKKAGASG-VR--------------AGFGG--YSYLYEPLWW--VGMITMVVGEI 77 (209)
Q Consensus 17 ~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~-~~--------------a~~~~--~~~l~~~~W~--~G~~l~~lG~~ 77 (209)
...|..+++.++++.+...+++|+-. +.+... .. ...+. ....+...+. .|+...+++..
T Consensus 152 ~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~ 230 (292)
T COG0697 152 SLLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYL 230 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999743 211100 00 00001 1111122222 34444456788
Q ss_pred HHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEe
Q 028389 78 ANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVL 134 (209)
Q Consensus 78 ~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~ 134 (209)
..+.++...|...++|+..+..+++.+++..+++|+++..++.|+++++.|..+...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~ 287 (292)
T COG0697 231 LWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASL 287 (292)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhc
Confidence 889999999999999999999999999999999999999999999999999876543
No 27
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.09 E-value=0.00098 Score=59.02 Aligned_cols=75 Identities=16% Similarity=0.345 Sum_probs=67.6
Q ss_pred hhHHHHHHHH---HHHHHHHHHHHHhhccchhhhcchh-hhHHHHHHHHHHHhhccccccc----chhhhHheeceeeeE
Q 028389 62 EPLWWVGMIT---MVVGEIANFAAYAFAPAILVTPLGA-LSIIISAALAHIILRERLHIFG----ILGCILCVVGSTTIV 133 (209)
Q Consensus 62 ~~~W~~G~~l---~~lG~~~~f~Al~fap~slV~PLga-~~lv~~~ila~~~L~E~l~~~~----~~G~~l~i~G~~lvv 133 (209)
...|..|++. ...|++..+.|.....+++-.|+.. ++++++.+.+++++||+.++++ ..|++++++|+.++.
T Consensus 56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~ 135 (290)
T TIGR00776 56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS 135 (290)
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence 3456668877 8999999999999999999999999 9999999999999999999999 999999999988875
Q ss_pred eec
Q 028389 134 LHA 136 (209)
Q Consensus 134 ~~a 136 (209)
...
T Consensus 136 ~~~ 138 (290)
T TIGR00776 136 RSK 138 (290)
T ss_pred ecc
Confidence 554
No 28
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.03 E-value=0.00065 Score=58.28 Aligned_cols=62 Identities=16% Similarity=0.208 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeE
Q 028389 72 MVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIV 133 (209)
Q Consensus 72 ~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv 133 (209)
+..+..+.+.|+...|++-.+-+...+.++.++++++++|||+++++|.|+.+...|+.+++
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 55777888999999999999999999999999999999999999999999999999988764
No 29
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=96.88 E-value=0.0032 Score=55.77 Aligned_cols=113 Identities=22% Similarity=0.177 Sum_probs=83.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHhhccCc---cc-----CC----CC----ccccchhHHH----HHHHHHHHHH
Q 028389 17 NIKGLILALSSSIFIGSSFIVKKKGLKKAGASGV---RA-----GF----GG----YSYLYEPLWW----VGMITMVVGE 76 (209)
Q Consensus 17 ~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~~---~a-----~~----~~----~~~l~~~~W~----~G~~l~~lG~ 76 (209)
...|+..++.|+++.+.-...-|+.. .+.... .. +. -. ++. +++.+| .|+. ..++.
T Consensus 150 ~~~Gi~~~l~sg~~y~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Gi~-~~ia~ 225 (290)
T TIGR00776 150 FKKGILLLLMSTIGYLVYVVVAKAFG--VDGLSVLLPQAIGMVIGGIIFNLGHILAKPL-KKYAILLNILPGLM-WGIGN 225 (290)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHcC--CCcceehhHHHHHHHHHHHHHHHHHhcccch-HHHHHHHHHHHHHH-HHHHH
Confidence 45699999999999998888877531 111000 00 00 00 111 233444 4444 46778
Q ss_pred HHHHHHHh-hccchhhhcchhhhHHHHHHHHHHHhhcccccccc----hhhhHheeceeeeE
Q 028389 77 IANFAAYA-FAPAILVTPLGALSIIISAALAHIILRERLHIFGI----LGCILCVVGSTTIV 133 (209)
Q Consensus 77 ~~~f~Al~-fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~----~G~~l~i~G~~lvv 133 (209)
.+.+.+.. ..+++.-.++..+..+.+.+.+.+++||+.+++++ .|+++++.|+.++.
T Consensus 226 ~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 226 FFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 88888888 99999999999999999999999999999999999 99999999988764
No 30
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=96.80 E-value=0.0024 Score=54.05 Aligned_cols=73 Identities=25% Similarity=0.396 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHH-HHhhcccccccchhhhHheeceeeeEeecCCc
Q 028389 67 VGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAH-IILRERLHIFGILGCILCVVGSTTIVLHAPAE 139 (209)
Q Consensus 67 ~G~~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~-~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~~ 139 (209)
.|......+..+.+.++...|+...+++.+.+.++..+++. +++|||++++++.|..+...|+.++......+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~ 148 (292)
T COG0697 75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGG 148 (292)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcc
Confidence 45566778888999999999999999999999999999997 67799999999999999999988875555443
No 31
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=96.71 E-value=0.003 Score=55.48 Aligned_cols=66 Identities=14% Similarity=0.163 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeee
Q 028389 66 WVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI 132 (209)
Q Consensus 66 ~~G~~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lv 132 (209)
..|+. +++....+..++.+.+++..+=+-+...+++++++.+++|||++++.+.|+.+++.|+.+.
T Consensus 70 ~~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~ 135 (302)
T TIGR00817 70 PVAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA 135 (302)
T ss_pred HHHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence 35555 4677788999999999999999999999999999999999999999999999999999754
No 32
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.58 E-value=0.0056 Score=54.20 Aligned_cols=77 Identities=14% Similarity=0.143 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecCCccc
Q 028389 65 WWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAERE 141 (209)
Q Consensus 65 W~~G~~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~~~~ 141 (209)
|+.=-.+..++..++-.|+.+.|...-+=+-+..++.+++++.+++|+|.+++++.++.++++|+.+......++++
T Consensus 67 ~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~ 143 (303)
T PF08449_consen 67 YAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS 143 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence 33333556688889999999999999999999999999999999999999999999999999999998887655443
No 33
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.51 E-value=0.02 Score=44.34 Aligned_cols=73 Identities=18% Similarity=0.179 Sum_probs=55.6
Q ss_pred cchhHHHHHHHH-HHHHHHHHHHHHhhccchhhhcch-hhhHHHHHHHHHHHhhcccccccchhhhHheeceeee
Q 028389 60 LYEPLWWVGMIT-MVVGEIANFAAYAFAPAILVTPLG-ALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI 132 (209)
Q Consensus 60 l~~~~W~~G~~l-~~lG~~~~f~Al~fap~slV~PLg-a~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lv 132 (209)
+++|.|...+.. +++....--.|+...|..+.-|.= +++.+..++.+.++.||+++..++.|+.+++.|++.+
T Consensus 32 f~~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 32 FRRKIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 345666555433 344444555666677888877764 5888999999999999999999999999999998764
No 34
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=96.38 E-value=0.0023 Score=56.38 Aligned_cols=63 Identities=13% Similarity=-0.032 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEee
Q 028389 73 VVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLH 135 (209)
Q Consensus 73 ~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~ 135 (209)
.++..+.+.++...|++.++++.-+..+++.+++.++++|+++...+.|+++++.|+.++...
T Consensus 224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~ 286 (296)
T PRK15430 224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD 286 (296)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 367889999999999999999999999999999999999999999999999999988766443
No 35
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.37 E-value=0.0065 Score=46.75 Aligned_cols=72 Identities=15% Similarity=0.013 Sum_probs=56.1
Q ss_pred chhHHHHHH-HHHHHHHHHHHHHHhhccchhhhcch-hhhHHHHHHHHHHHhhcccccccchhhhHheeceeee
Q 028389 61 YEPLWWVGM-ITMVVGEIANFAAYAFAPAILVTPLG-ALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI 132 (209)
Q Consensus 61 ~~~~W~~G~-~l~~lG~~~~f~Al~fap~slV~PLg-a~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lv 132 (209)
+++.|+..+ ..+.+....--.|+...|..+.-++= +++.+.+++.+.++.||++++.++.|+.+++.|++.+
T Consensus 27 ~~~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 27 SRLTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 345555544 33455555555667777888877764 5899999999999999999999999999999998876
No 36
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=96.31 E-value=0.0052 Score=55.89 Aligned_cols=59 Identities=15% Similarity=0.215 Sum_probs=54.9
Q ss_pred HHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeE
Q 028389 75 GEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIV 133 (209)
Q Consensus 75 G~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv 133 (209)
+..+...|+.+.+++..+=+-+.+.+++++++++++|||++++.+.|++++++|+.+..
T Consensus 127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 45566699999999999999999999999999999999999999999999999999875
No 37
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.30 E-value=0.009 Score=53.19 Aligned_cols=80 Identities=13% Similarity=0.277 Sum_probs=67.9
Q ss_pred hHHHHHHHH---HHHHHHHHHHHHhhccchhhhcch-hhhHHHHHHHHHHHhhccccccc----chhhhHheeceeeeEe
Q 028389 63 PLWWVGMIT---MVVGEIANFAAYAFAPAILVTPLG-ALSIIISAALAHIILRERLHIFG----ILGCILCVVGSTTIVL 134 (209)
Q Consensus 63 ~~W~~G~~l---~~lG~~~~f~Al~fap~slV~PLg-a~~lv~~~ila~~~L~E~l~~~~----~~G~~l~i~G~~lvv~ 134 (209)
..|+.+++. -.+|++++|.|+.....|.-.|++ +..++.|++.+.++++|--+..+ ..+++++++|+.+...
T Consensus 43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~ 122 (269)
T PF06800_consen 43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY 122 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence 567777754 679999999999999999999999 89999999999999999888766 4588999999988776
Q ss_pred ecCCcccc
Q 028389 135 HAPAEREI 142 (209)
Q Consensus 135 ~a~~~~~~ 142 (209)
..+++++.
T Consensus 123 ~~~~~~~~ 130 (269)
T PF06800_consen 123 QDKKSDKS 130 (269)
T ss_pred cccccccc
Confidence 66665543
No 38
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.25 E-value=0.0028 Score=56.80 Aligned_cols=130 Identities=22% Similarity=0.336 Sum_probs=77.0
Q ss_pred CCCCCCccccCC----CCchhHHHHHHHHHHHHHHHHHHHHHhhHHHhhcc--CcccCCC------Cccccchh------
Q 028389 2 ADPNGHSWRDGM----SSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGAS--GVRAGFG------GYSYLYEP------ 63 (209)
Q Consensus 2 ~~~~~~~~~~~~----~~~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~--~~~a~~~------~~~~l~~~------ 63 (209)
+||++.-|+... .....+|+.+..+| .+.+.+.++-++.+....+. ..|--.. ..-|.+.|
T Consensus 17 ~d~~~r~~e~~~qri~~d~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g 95 (346)
T KOG4510|consen 17 PDPAPRWLERTLQRISKDKPNLGLLLLTVS-YFFNSCMVVSTKVLENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEG 95 (346)
T ss_pred cCCCccHHHHHhhHhhcCCCccCceehhhH-HHHhhHHHhhhhhhccChhHhhhhhhhhehhhhheEEEEEeeeeecCCC
Confidence 466665443222 12356899999999 77777777777754332211 1110000 00111111
Q ss_pred --HH--HHHHHHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeE
Q 028389 64 --LW--WVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIV 133 (209)
Q Consensus 64 --~W--~~G~~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv 133 (209)
.| .-|+.-. .|..+.+.||.+.|.+=-.=+.=.+.+++.++|..+||||.++.|-+|+...+.|+++++
T Consensus 96 ~R~~LiLRg~mG~-tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIv 168 (346)
T KOG4510|consen 96 KRKWLILRGFMGF-TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIV 168 (346)
T ss_pred cEEEEEeehhhhh-hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEe
Confidence 12 2232211 344455566655444332333446789999999999999999999999999999999885
No 39
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=96.19 E-value=0.013 Score=53.52 Aligned_cols=128 Identities=22% Similarity=0.164 Sum_probs=83.4
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHhhHHHhhccCccc---------------CCCCccccch--hHHHHHHHHHHH
Q 028389 12 GMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRA---------------GFGGYSYLYE--PLWWVGMITMVV 74 (209)
Q Consensus 12 ~~~~~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~~~a---------------~~~~~~~l~~--~~W~~G~~l~~l 74 (209)
++.++..+|=.+++.|+++.|++.++|++-..+.+..+.-. .-| ++-+++ +.|-.+. +++.
T Consensus 161 ~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile-~~~i~~~~w~~~~~~-~~v~ 238 (334)
T PF06027_consen 161 SSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILE-RSGIESIHWTSQVIG-LLVG 238 (334)
T ss_pred CCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhee-hhhhhccCCChhhHH-HHHH
Confidence 45678899999999999999999999999665433211000 000 111111 2222222 2333
Q ss_pred HHHHHHHHHhhccchhh------hcch-hhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecCCccc
Q 028389 75 GEIANFAAYAFAPAILV------TPLG-ALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAERE 141 (209)
Q Consensus 75 G~~~~f~Al~fap~slV------~PLg-a~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~~~~ 141 (209)
..++.|.-|.+.|..+- .-++ -.+-+++.++..++.|+++++.-++|-+++++|.++.....+++++
T Consensus 239 ~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~ 312 (334)
T PF06027_consen 239 YALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEE 312 (334)
T ss_pred HHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccc
Confidence 44466777777776442 2223 3457788899999999999999999999999998887665555443
No 40
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=96.03 E-value=0.015 Score=53.40 Aligned_cols=60 Identities=18% Similarity=0.436 Sum_probs=54.2
Q ss_pred HHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHH------hhcccccccchhhhHheeceeeeEe
Q 028389 75 GEIANFAAYAFAPAILVTPLGALSIIISAALAHII------LRERLHIFGILGCILCVVGSTTIVL 134 (209)
Q Consensus 75 G~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~------L~E~l~~~~~~G~~l~i~G~~lvv~ 134 (209)
.....+.++.+.|++..+=+.+...++++++++++ +|||++++++.|++++++|+.++..
T Consensus 91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 33467889999999999999999999999999999 6999999999999999999987654
No 41
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=95.99 E-value=0.01 Score=52.06 Aligned_cols=66 Identities=15% Similarity=0.218 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHH-hhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeE
Q 028389 67 VGMITMVVGEIANFAAY-AFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIV 133 (209)
Q Consensus 67 ~G~~l~~lG~~~~f~Al-~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv 133 (209)
.|......+..+.+.+. ...|+...+-+-....++..+++++ +|||++++++.|+.+.+.|+.++.
T Consensus 74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~ 140 (292)
T PRK11272 74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLN 140 (292)
T ss_pred HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHh
Confidence 44444445566667777 8888888888999999999999975 799999999999999999988764
No 42
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=95.91 E-value=0.0083 Score=52.72 Aligned_cols=116 Identities=13% Similarity=0.176 Sum_probs=76.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHhhccCccc-----------------CCCCcccc----ch--------hHHHH
Q 028389 17 NIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRA-----------------GFGGYSYL----YE--------PLWWV 67 (209)
Q Consensus 17 ~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~~~a-----------------~~~~~~~l----~~--------~~W~~ 67 (209)
..+|..+++.++++.+...++.||-..+.+.+..+. ..+..+.. .+ ..|..
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV 222 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence 467999999999999999999888543111110000 00110000 00 11211
Q ss_pred HHH----HHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeee
Q 028389 68 GMI----TMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI 132 (209)
Q Consensus 68 G~~----l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lv 132 (209)
+.. .+.......+.+....+++..+-.+.+..++..+++.++++|+++..++.|.++++.|..+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~ 291 (302)
T TIGR00817 223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY 291 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence 211 11122234456777888888888899999999999999999999999999999999998764
No 43
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=95.41 E-value=0.069 Score=41.70 Aligned_cols=57 Identities=21% Similarity=0.370 Sum_probs=47.9
Q ss_pred HHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceee
Q 028389 75 GEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTT 131 (209)
Q Consensus 75 G~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~l 131 (209)
-+..++.......+..-+=++.+--+.+.+++..+.+|+++.+++.|+.+++.|+..
T Consensus 94 ~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 94 YNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 334556666667777777788899999999999999999999999999999999764
No 44
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=95.38 E-value=0.022 Score=44.14 Aligned_cols=71 Identities=15% Similarity=0.130 Sum_probs=52.7
Q ss_pred hhHHHHHHH-HHHHHHHHHHHHHhhccchhhhcc-hhhhHHHHHHHHHHHhhcccccccchhhhHheeceeee
Q 028389 62 EPLWWVGMI-TMVVGEIANFAAYAFAPAILVTPL-GALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI 132 (209)
Q Consensus 62 ~~~W~~G~~-l~~lG~~~~f~Al~fap~slV~PL-ga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lv 132 (209)
|+.|.+.+. .+++...+--.|+.-.|..+--++ ++++.+..++.+.+++||+++..++.|..+++.|++.+
T Consensus 29 ~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L 101 (106)
T COG2076 29 RLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL 101 (106)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence 445555443 344444444455666677766554 67889999999999999999999999999999998765
No 45
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=94.60 E-value=0.11 Score=43.64 Aligned_cols=118 Identities=21% Similarity=0.242 Sum_probs=83.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhhHHHhhcc-Ccc-------------------cCC--CCcccc--chhHHHHHH
Q 028389 14 SSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGAS-GVR-------------------AGF--GGYSYL--YEPLWWVGM 69 (209)
Q Consensus 14 ~~~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~-~~~-------------------a~~--~~~~~l--~~~~W~~G~ 69 (209)
.++...|+...+.++++-+..-+.|+|+.++.+.. ..+ +++ ...+.+ ..+.+|.=.
T Consensus 80 ~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (222)
T TIGR00803 80 FGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVG 159 (222)
T ss_pred cccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHH
Confidence 35667888887788888888889998875432110 000 000 011111 123334444
Q ss_pred HHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceee
Q 028389 70 ITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTT 131 (209)
Q Consensus 70 ~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~l 131 (209)
++...|..+-...+.+++.....=..++..+.+.+++.++.+|+++...+.|+.++..|..+
T Consensus 160 ~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 160 LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 55667777777888888989999999999999999999999999999999999999998653
No 46
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=94.57 E-value=0.27 Score=43.91 Aligned_cols=121 Identities=20% Similarity=0.180 Sum_probs=87.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhHHHhhccCcc-----------------cCCCCccccchhH-HHHHHHHHHH---
Q 028389 16 DNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVR-----------------AGFGGYSYLYEPL-WWVGMITMVV--- 74 (209)
Q Consensus 16 ~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~~~-----------------a~~~~~~~l~~~~-W~~G~~l~~l--- 74 (209)
-..+|+.+|+.+..|.+.=.+.-||.-.. + ++.+ ..+.+ +-+.+|. -..++..-++
T Consensus 145 lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~-~g~~g~a~gm~vAaviv~Pig~~~ag-~~l~~p~ll~laLgvavlSSa 221 (292)
T COG5006 145 LDPVGVALALGAGACWALYIVLGQRAGRA-E-HGTAGVAVGMLVAALIVLPIGAAQAG-PALFSPSLLPLALGVAVLSSA 221 (292)
T ss_pred CCHHHHHHHHHHhHHHHHHHHHcchhccc-C-CCchHHHHHHHHHHHHHhhhhhhhcc-hhhcChHHHHHHHHHHHHhcc
Confidence 34789999999999998777777763321 1 1111 01122 3334443 3344443333
Q ss_pred -HHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecCCc
Q 028389 75 -GEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAE 139 (209)
Q Consensus 75 -G~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~~ 139 (209)
=..+..+|+.-.|...-.-|-++...+.++....+|+|+++..+|.|+++++.++.-..+...++
T Consensus 222 lPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~ 287 (292)
T COG5006 222 LPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP 287 (292)
T ss_pred cchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence 34578899999999999999999999999999999999999999999999999988665555544
No 47
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=94.47 E-value=0.14 Score=47.72 Aligned_cols=74 Identities=22% Similarity=0.281 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHH---HHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecCCcc
Q 028389 67 VGMITMVVGEIANF---AAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAER 140 (209)
Q Consensus 67 ~G~~l~~lG~~~~f---~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~~~ 140 (209)
.++.+..+-..+|+ +|++|..++-.+=+.+.|=+++..++..+.+||+|....+++++++.|++++.....++.
T Consensus 161 ~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~ 237 (416)
T KOG2765|consen 161 LSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN 237 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc
Confidence 44444445555555 589999999999999999999999999999999999999999999999999988866553
No 48
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=94.10 E-value=0.15 Score=45.39 Aligned_cols=118 Identities=19% Similarity=0.187 Sum_probs=77.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhhHHHhhcc-Cccc-----------CCCCccccchhHHH--HHHHHHHHHHHHH
Q 028389 14 SSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGAS-GVRA-----------GFGGYSYLYEPLWW--VGMITMVVGEIAN 79 (209)
Q Consensus 14 ~~~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~-~~~a-----------~~~~~~~l~~~~W~--~G~~l~~lG~~~~ 79 (209)
.++.--|+...++|++.+-.=..+.|.......+- -|.+ --..+++.++..|. .+=++..+|+++.
T Consensus 133 ~~~~~kgi~~Ll~stigy~~Y~~~~~~~~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~w~ignl~~ 212 (269)
T PF06800_consen 133 KSNMKKGILALLISTIGYWIYSVIPKAFHVSGWSAFLPQAIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLIWGIGNLFY 212 (269)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHhcCCChhHhHHHHHHHHHHHHHHHhhcccccccccchHHhhHHHHHHHHHHHHH
Confidence 45566677778888777654444444432211000 0000 00122333344443 2224566888888
Q ss_pred HHHHhhccchhhhcchhhhHHHHHHHHHHHhhccccccc----chhhhHheeceee
Q 028389 80 FAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFG----ILGCILCVVGSTT 131 (209)
Q Consensus 80 f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~----~~G~~l~i~G~~l 131 (209)
+.|-.-.-+..=-|++..+++++.+-+-+++||+=++++ ..|+++++.|+++
T Consensus 213 ~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 213 LISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 888888888888999999999999999999999988887 5788888888764
No 49
>PRK13499 rhamnose-proton symporter; Provisional
Probab=94.01 E-value=0.033 Score=51.24 Aligned_cols=122 Identities=17% Similarity=0.157 Sum_probs=87.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhhHHHhhc-------cC-------c-----ccCCCCccccc---hhHHHHHHH-
Q 028389 14 SSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGA-------SG-------V-----RAGFGGYSYLY---EPLWWVGMI- 70 (209)
Q Consensus 14 ~~~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~-------~~-------~-----~a~~~~~~~l~---~~~W~~G~~- 70 (209)
+.+..+|+...++++++.+.=.+=||| . +.-+ .+ + -..++..++++ ...|..+++
T Consensus 2 ~~~~~~G~~~~~i~~~~~GS~~~p~K~-~-k~w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~ 79 (345)
T PRK13499 2 SNAIILGIIWHLIGGASSGSFYAPFKK-V-KKWSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF 79 (345)
T ss_pred CchhHHHHHHHHHHHHHhhcccccccc-c-CCCchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence 456788999999999999988888888 2 2111 00 0 00011223333 334666654
Q ss_pred --HHHHHHHHHHHHHhhccchhhhcch-hhhHHHHHHHHHHHhhccc---ccc----cchhhhHheeceeeeEeecC
Q 028389 71 --TMVVGEIANFAAYAFAPAILVTPLG-ALSIIISAALAHIILRERL---HIF----GILGCILCVVGSTTIVLHAP 137 (209)
Q Consensus 71 --l~~lG~~~~f~Al~fap~slV~PLg-a~~lv~~~ila~~~L~E~l---~~~----~~~G~~l~i~G~~lvv~~a~ 137 (209)
+-.+|++.++.++.+.-.|+-.|++ +++++.+.++.+.+++|=- +.. ...|++++++|+.+....+.
T Consensus 80 G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 80 GALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred HHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4679999999999999999999998 8999999999999998643 333 48999999999998766433
No 50
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=93.13 E-value=0.49 Score=41.56 Aligned_cols=112 Identities=14% Similarity=0.047 Sum_probs=72.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhHHHhhcc---Cccc----------CCCCccccchhHH----HHHHHHHHHHHHH
Q 028389 16 DNIKGLILALSSSIFIGSSFIVKKKGLKKAGAS---GVRA----------GFGGYSYLYEPLW----WVGMITMVVGEIA 78 (209)
Q Consensus 16 ~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~---~~~a----------~~~~~~~l~~~~W----~~G~~l~~lG~~~ 78 (209)
+...|+.+.+.+.++.+.+.+..|.+..+.+.. ..|- -..++...+++.| +.|.. +.....+
T Consensus 9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~ 87 (293)
T PRK10532 9 PVWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVS-LGGMNYL 87 (293)
T ss_pred ccchHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHH-HHHHHHH
Confidence 447889999999999999999999876542211 1110 0001111222333 55553 5666777
Q ss_pred HHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEe
Q 028389 79 NFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVL 134 (209)
Q Consensus 79 ~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~ 134 (209)
.+.++...|++..+-+.....++.+++++ |+. .++.++.++++|+.+++.
T Consensus 88 ~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~--~~~~~~~i~~~Gv~li~~ 137 (293)
T PRK10532 88 FYLSIQTVPLGIAVALEFTGPLAVALFSS----RRP--VDFVWVVLAVLGLWFLLP 137 (293)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHhc----CCh--HHHHHHHHHHHHHheeee
Confidence 88899999999877777777777776653 543 346677888899887754
No 51
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=92.91 E-value=0.14 Score=46.08 Aligned_cols=121 Identities=19% Similarity=0.133 Sum_probs=83.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHh-hHHHhhc-cCc----------------ccCCCCccccchhHHHHHHHHHHHHHHH
Q 028389 17 NIKGLILALSSSIFIGSSFIVKKK-GLKKAGA-SGV----------------RAGFGGYSYLYEPLWWVGMITMVVGEIA 78 (209)
Q Consensus 17 ~~iGi~LAl~ss~~i~~g~vlqK~-~~~~~~~-~~~----------------~a~~~~~~~l~~~~W~~G~~l~~lG~~~ 78 (209)
.--|+.+++.+.++.|.--..-|. ......+ -.. |..++.++..|+|+=+....+-.+=...
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~ 84 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGL 84 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 345888899999888876655554 1111000 000 1112234567788777777776666678
Q ss_pred HHHHHhhccch---hhhcch-hhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecC
Q 028389 79 NFAAYAFAPAI---LVTPLG-ALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAP 137 (209)
Q Consensus 79 ~f~Al~fap~s---lV~PLg-a~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~ 137 (209)
|..-|.+||-. +=+.|| =+..++|.+++..++|||+++.+|+.+.+..+|+..-..+..
T Consensus 85 nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g 147 (293)
T COG2962 85 NWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG 147 (293)
T ss_pred HHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence 88889998865 445555 356678899999999999999999999999999987655544
No 52
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=92.52 E-value=0.48 Score=41.91 Aligned_cols=120 Identities=22% Similarity=0.154 Sum_probs=74.6
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHhhHHHhhccCccc-----------------C---CCCcc----ccchhHHHH
Q 028389 12 GMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRA-----------------G---FGGYS----YLYEPLWWV 67 (209)
Q Consensus 12 ~~~~~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~~~a-----------------~---~~~~~----~l~~~~W~~ 67 (209)
+...++..|+.+.+.+-++-+.-.+.|+|-..+.+.+..+. . ++..+ ..+.|..+.
T Consensus 147 ~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~ 226 (303)
T PF08449_consen 147 SSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLL 226 (303)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHH
Confidence 33344556999999999999999999999765544322110 0 01011 112233222
Q ss_pred HH-HHHHHHHHHH---HHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceee
Q 028389 68 GM-ITMVVGEIAN---FAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTT 131 (209)
Q Consensus 68 G~-~l~~lG~~~~---f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~l 131 (209)
-+ .....+.+++ +.-..--.+...+=.+.+--+.+.+++.++.+++++..+|.|+.++..|..+
T Consensus 227 ~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~ 294 (303)
T PF08449_consen 227 YLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFL 294 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHH
Confidence 22 2222333333 3333333445555566667788889999999999999999999999998764
No 53
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=92.45 E-value=0.14 Score=40.00 Aligned_cols=78 Identities=18% Similarity=0.250 Sum_probs=65.5
Q ss_pred CCccccchhHHHHHHHHHHHHHHHHHHHHhhccchhhhcch-hhhHHHHHHHHHHHhhcccc-cccchhhhHheeceeee
Q 028389 55 GGYSYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTPLG-ALSIIISAALAHIILRERLH-IFGILGCILCVVGSTTI 132 (209)
Q Consensus 55 ~~~~~l~~~~W~~G~~l~~lG~~~~f~Al~fap~slV~PLg-a~~lv~~~ila~~~L~E~l~-~~~~~G~~l~i~G~~lv 132 (209)
+.+..+.|+..|+=+++---|+...+.-++-+|.++--|.. +++..+++++...+ +|+.. ++...|+.++++|+.+.
T Consensus 45 e~~tl~l~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 45 EMKTLFLNWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHhHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccceeehhhhHHhhhhhhe
Confidence 45567778888999999888999999999999999999986 78999999988765 56554 56699999999998765
Q ss_pred E
Q 028389 133 V 133 (209)
Q Consensus 133 v 133 (209)
+
T Consensus 124 i 124 (125)
T KOG4831|consen 124 I 124 (125)
T ss_pred e
Confidence 4
No 54
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=92.17 E-value=0.3 Score=44.31 Aligned_cols=78 Identities=14% Similarity=0.152 Sum_probs=68.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEee
Q 028389 58 SYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLH 135 (209)
Q Consensus 58 ~~l~~~~W~~G~~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~ 135 (209)
+.++-.....=.++.+.|....++++-+..++--|=+-..-+++..+++.-+||++++.++|+|+..+++|.+.+...
T Consensus 82 ~pf~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 82 SPFNPVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred CCCCcceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 344444555567888999999999999999999999999999999999999999999999999999999998877655
No 55
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=91.42 E-value=0.23 Score=45.77 Aligned_cols=79 Identities=16% Similarity=0.174 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecCCccccC
Q 028389 65 WWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIE 143 (209)
Q Consensus 65 W~~G~~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~~~~~~ 143 (209)
|-+=.++|.+-+-..++++..-|++.-+....+-++.++++...+|++|+++++|...++...|+.++=...+.+.+..
T Consensus 95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~ 173 (345)
T KOG2234|consen 95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAK 173 (345)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcc
Confidence 3344567888887899999999999999999999999999999999999999999999999999998764444443333
No 56
>PRK02237 hypothetical protein; Provisional
Probab=89.99 E-value=0.73 Score=35.84 Aligned_cols=48 Identities=21% Similarity=0.373 Sum_probs=40.4
Q ss_pred hhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecCC
Q 028389 90 LVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPA 138 (209)
Q Consensus 90 lV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~ 138 (209)
+-+.-|.+-++.+.+.....-|+|.++.|++|.++|.+|+.++ +++|.
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI-~~~pR 108 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI-MYAPR 108 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh-eecCC
Confidence 4455678888888899999999999999999999999998766 56664
No 57
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=89.61 E-value=1.3 Score=40.36 Aligned_cols=50 Identities=14% Similarity=0.292 Sum_probs=39.3
Q ss_pred HHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceee
Q 028389 82 AYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTT 131 (209)
Q Consensus 82 Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~l 131 (209)
++.-.++.--+=.+.+--++..+++..+++|+++..+++|+++++.|+.+
T Consensus 296 ~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l 345 (350)
T PTZ00343 296 CLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL 345 (350)
T ss_pred HHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence 34444444445555667788888999999999999999999999999865
No 58
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=88.84 E-value=1.6 Score=33.89 Aligned_cols=49 Identities=20% Similarity=0.430 Sum_probs=40.8
Q ss_pred hhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecCCc
Q 028389 90 LVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAE 139 (209)
Q Consensus 90 lV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~~ 139 (209)
+-+.-|.+-++.+.+-....-|.+.++.||.|...|++|+. +++++|..
T Consensus 60 vYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~-vil~~pR~ 108 (109)
T COG1742 60 VYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVA-VILFGPRG 108 (109)
T ss_pred HHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhcee-eeEeCCCC
Confidence 45667888888999999999999999999999999999954 45677643
No 59
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=88.22 E-value=3.2 Score=36.10 Aligned_cols=111 Identities=20% Similarity=0.326 Sum_probs=74.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhhHHHhhcc-Ccc-------------------cCC--CCccccchhHH--HHHH
Q 028389 14 SSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGAS-GVR-------------------AGF--GGYSYLYEPLW--WVGM 69 (209)
Q Consensus 14 ~~~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~-~~~-------------------a~~--~~~~~l~~~~W--~~G~ 69 (209)
.++..+|+.+.+.++++-+.+-+...|-+++.+.+ ..| +++ .....+....| |.=+
T Consensus 109 ~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i 188 (244)
T PF04142_consen 109 NQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVI 188 (244)
T ss_pred cchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHH
Confidence 45678999999999999999999888866654321 000 010 11123332222 2333
Q ss_pred HHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhH
Q 028389 70 ITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCIL 124 (209)
Q Consensus 70 ~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l 124 (209)
.+..+|-+.--..+.+++-.+=.=-.+++++.+++++..+.+.+++..-.+|+.+
T Consensus 189 ~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~ 243 (244)
T PF04142_consen 189 FLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL 243 (244)
T ss_pred HHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence 4455666666667777776666666789999999999999999999888887765
No 60
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=82.13 E-value=2.8 Score=38.19 Aligned_cols=63 Identities=13% Similarity=0.234 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEe
Q 028389 72 MVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVL 134 (209)
Q Consensus 72 ~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~ 134 (209)
+.+|-+..-.|+..-|.+.+|-+.+...+++++++.++.+|+.++..+.-...++.|+.+-..
T Consensus 93 ~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~ 155 (316)
T KOG1441|consen 93 FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASV 155 (316)
T ss_pred HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeee
Confidence 457888888999999999999999999999999999999999999999888888888776544
No 61
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=81.46 E-value=6 Score=37.22 Aligned_cols=130 Identities=18% Similarity=0.212 Sum_probs=83.9
Q ss_pred CCccccCCCCc--hhHHHHHHHHHHHHHHHHHHHHHhhHHHhhcc-Cccc-----------------------CCCCccc
Q 028389 6 GHSWRDGMSSD--NIKGLILALSSSIFIGSSFIVKKKGLKKAGAS-GVRA-----------------------GFGGYSY 59 (209)
Q Consensus 6 ~~~~~~~~~~~--~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~-~~~a-----------------------~~~~~~~ 59 (209)
+.+|++++.+. ..+|-.+|+.||+++|+=.++-||..-+++++ +.+. +.++.+.
T Consensus 232 ~~s~~~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~l 311 (416)
T KOG2765|consen 232 GDSKQNSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFEL 311 (416)
T ss_pred ccccccccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccC
Confidence 34566555443 49999999999999999999988854444221 1110 2222222
Q ss_pred cchhH----HHHHHHHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEee
Q 028389 60 LYEPL----WWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLH 135 (209)
Q Consensus 60 l~~~~----W~~G~~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~ 135 (209)
.+++. -..|++--++...+|..|..+....+++-=-++++..+++.=..+-+.+.+...++|.+.+..|-+.+-..
T Consensus 312 P~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~ 391 (416)
T KOG2765|consen 312 PSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNIS 391 (416)
T ss_pred CCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecc
Confidence 22221 23455555666777777776666444444447777777776666668889999999999999986665443
No 62
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=80.90 E-value=1.2 Score=40.07 Aligned_cols=56 Identities=23% Similarity=0.493 Sum_probs=50.5
Q ss_pred HHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeec
Q 028389 81 AAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHA 136 (209)
Q Consensus 81 ~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a 136 (209)
-||.+...+-++=|-.-+.+.-.+++.++||.|-+..++.|++.|+.|++++|...
T Consensus 97 ~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sD 152 (336)
T KOG2766|consen 97 KAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSD 152 (336)
T ss_pred eehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEee
Confidence 47888888888888899999999999999999999999999999999999988654
No 63
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=80.62 E-value=1.2 Score=34.56 Aligned_cols=46 Identities=26% Similarity=0.468 Sum_probs=39.4
Q ss_pred hhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecC
Q 028389 91 VTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAP 137 (209)
Q Consensus 91 V~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~ 137 (209)
-+.-|.+-++.+.+-....-|++.++.|++|..+|+.|+.++ +++|
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI-~~~P 105 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII-LFAP 105 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe-EecC
Confidence 445677888889999999999999999999999999998766 5665
No 64
>PRK13499 rhamnose-proton symporter; Provisional
Probab=73.57 E-value=16 Score=33.84 Aligned_cols=40 Identities=18% Similarity=0.341 Sum_probs=30.6
Q ss_pred ch-hhhHHHHHHHHHHHhhcccc--ccc----chhhhHheeceeeeEe
Q 028389 94 LG-ALSIIISAALAHIILRERLH--IFG----ILGCILCVVGSTTIVL 134 (209)
Q Consensus 94 Lg-a~~lv~~~ila~~~L~E~l~--~~~----~~G~~l~i~G~~lvv~ 134 (209)
++ +.+++++.+-+- ++||+=+ +++ +.|++++++|.+++.+
T Consensus 295 l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 295 LHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred HhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 55 777777777666 4999977 544 8999999999887654
No 65
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.41 E-value=2.6 Score=32.56 Aligned_cols=106 Identities=16% Similarity=0.169 Sum_probs=59.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhhHHHhhccCcccCCCCccccchhHHHHHHHHHHHHHHHHHHH---Hhhccchh
Q 028389 14 SSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMVVGEIANFAA---YAFAPAIL 90 (209)
Q Consensus 14 ~~~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~~~a~~~~~~~l~~~~W~~G~~l~~lG~~~~f~A---l~fap~sl 90 (209)
++.+.--+.|-+.|++|+. +--+||.+...++.- ..---.|=+.+.=+.+-.-.|=+. |.-+..-.
T Consensus 5 ~~~~l~~vlLL~~SNvFMT----FAWYghLk~~~~pl~-------~~i~~SWGIA~fEY~LqvPaNRiG~~v~s~~QLK~ 73 (116)
T COG3169 5 MSVYLYPVLLLIGSNVFMT----FAWYGHLKFTNKPLV-------IVILASWGIAFFEYLLQVPANRIGHQVYSAAQLKT 73 (116)
T ss_pred CchHHHHHHHHHhhHHHHH----HHHHHHHhccCCchh-------HHHHHHhhHHHHHHHHhCccchhhhhhccHHHHHH
Confidence 3455667778888888865 445677664322100 000112333333333322233222 22222222
Q ss_pred hhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeee
Q 028389 91 VTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI 132 (209)
Q Consensus 91 V~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lv 132 (209)
.|- .+++.+=+.++.+++||++++..++|-.++..|+.++
T Consensus 74 mQE--VItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 74 MQE--VITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHH--HHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 221 3566677889999999999999999988877776543
No 66
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=67.56 E-value=2.7 Score=32.62 Aligned_cols=35 Identities=11% Similarity=0.115 Sum_probs=27.6
Q ss_pred hhHHHHHHHHHHHhhcccccccchhhhHheeceee
Q 028389 97 LSIIISAALAHIILRERLHIFGILGCILCVVGSTT 131 (209)
Q Consensus 97 ~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~l 131 (209)
+++..=++++.+++||++++....|-++++.++.+
T Consensus 71 itL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 71 ITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 44455578899999999999999998888766544
No 67
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=63.85 E-value=64 Score=27.08 Aligned_cols=87 Identities=21% Similarity=0.293 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHhhccCcccCCCCccccchhHHHHHHHHHHHHHHHHH---HHHhhccchh---hhc
Q 028389 20 GLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMVVGEIANF---AAYAFAPAIL---VTP 93 (209)
Q Consensus 20 Gi~LAl~ss~~i~~g~vlqK~~~~~~~~~~~~a~~~~~~~l~~~~W~~G~~l~~lG~~~~f---~Al~fap~sl---V~P 93 (209)
|+.--++.++..++.+.+..+-..+... .-+++.||-.++...+..+.++ ....+.|..+ +.|
T Consensus 112 gi~tli~~~i~~G~~~~~~~~~i~~~~~-----------~~~r~~~~k~~~~~~~~~~~w~~~~~~~~~lp~~inp~l~~ 180 (206)
T PF06570_consen 112 GIITLILVSIVGGLVFYFIFKYIYPYKK-----------KKKRPSWWKYILISVLAMVLWIVIFVLTSFLPPVINPVLPP 180 (206)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcccc-----------cccccHHHHHHHHHHHHHHHHHHHHHHHHHccccCCcCCCH
Confidence 5555455566666666555444333211 1223455555444444444333 2333355553 344
Q ss_pred chhhhHHHHHHHHHHHhhcccccc
Q 028389 94 LGALSIIISAALAHIILRERLHIF 117 (209)
Q Consensus 94 Lga~~lv~~~ila~~~L~E~l~~~ 117 (209)
...+-+-.-++..++++|.|.+.+
T Consensus 181 ~~~iiig~i~~~~~~~lkkk~~i~ 204 (206)
T PF06570_consen 181 WVYIIIGVIAFALRFYLKKKYNIT 204 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 444444455667888899888754
No 68
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=61.16 E-value=4.4 Score=36.22 Aligned_cols=93 Identities=16% Similarity=0.239 Sum_probs=73.8
Q ss_pred cccchhHHHHHHHH---HHHHHHHHHHHHhhccchhhhcch-hhhHHHHHHHHHHHhhccccccc----chhhhHheece
Q 028389 58 SYLYEPLWWVGMIT---MVVGEIANFAAYAFAPAILVTPLG-ALSIIISAALAHIILRERLHIFG----ILGCILCVVGS 129 (209)
Q Consensus 58 ~~l~~~~W~~G~~l---~~lG~~~~f~Al~fap~slV~PLg-a~~lv~~~ila~~~L~E~l~~~~----~~G~~l~i~G~ 129 (209)
|.++-..|..|++. -.+|+..+|-|..+.-.|.-.|+. +..++-+.+++.+.++|=-+..+ ..+.++++.|.
T Consensus 52 p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~ 131 (288)
T COG4975 52 PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGI 131 (288)
T ss_pred CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhh
Confidence 34444567788754 568999999999999999999998 67899999999999999777654 67788999999
Q ss_pred eeeEeecCCccccCCHHHHHH
Q 028389 130 TTIVLHAPAEREIESVIEVWN 150 (209)
Q Consensus 130 ~lvv~~a~~~~~~~t~~el~~ 150 (209)
.+-..-.+.++++.+.+++.+
T Consensus 132 ~lTs~~~~~nk~~~~~~n~kk 152 (288)
T COG4975 132 YLTSKQDRNNKEEENPSNLKK 152 (288)
T ss_pred eEeeeeccccccccChHhhhh
Confidence 888777766666666666543
No 69
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=61.01 E-value=24 Score=31.66 Aligned_cols=79 Identities=15% Similarity=0.231 Sum_probs=51.9
Q ss_pred cccchhHHHHHHHHHH---HHHHHHH-HHHhhccchhhhcchhhhHHHHHHHHHHHhhccccccc-------chhhhHhe
Q 028389 58 SYLYEPLWWVGMITMV---VGEIANF-AAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFG-------ILGCILCV 126 (209)
Q Consensus 58 ~~l~~~~W~~G~~l~~---lG~~~~f-~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~-------~~G~~l~i 126 (209)
+-+++|.-|.=++.+. +.++-.+ -|+..-+.++|.|+--.......+++...+-+.++..+ ..|+..++
T Consensus 205 ~~f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii 284 (300)
T PF05653_consen 205 NQFTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIII 284 (300)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHH
Confidence 3456666554444433 4443333 38888899999999988887777777665544344432 57899999
Q ss_pred eceeeeEeec
Q 028389 127 VGSTTIVLHA 136 (209)
Q Consensus 127 ~G~~lvv~~a 136 (209)
.|+.++..+.
T Consensus 285 ~GV~lL~~~~ 294 (300)
T PF05653_consen 285 IGVFLLSSSK 294 (300)
T ss_pred HhhheeeccC
Confidence 9988774443
No 70
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=57.47 E-value=1.3 Score=39.42 Aligned_cols=62 Identities=26% Similarity=0.294 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhccccccc----chhhhHheeceeeeEe
Q 028389 73 VVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFG----ILGCILCVVGSTTIVL 134 (209)
Q Consensus 73 ~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~----~~G~~l~i~G~~lvv~ 134 (209)
..|++..+.|-..+-...=-.+..++++.+.+=.-++||||=|++| +.|+.+++.|++++..
T Consensus 220 a~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~ 285 (288)
T COG4975 220 AIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI 285 (288)
T ss_pred HhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence 4555555655555555555567888899999999999999999988 6788999999887643
No 71
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=54.66 E-value=22 Score=31.13 Aligned_cols=61 Identities=25% Similarity=0.210 Sum_probs=53.8
Q ss_pred HHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeec
Q 028389 76 EIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHA 136 (209)
Q Consensus 76 ~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a 136 (209)
......|+-...++.++.+-+-.-.+-.+++...||+|+.-.+++..++.+.|.+++....
T Consensus 67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D 127 (290)
T KOG4314|consen 67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD 127 (290)
T ss_pred CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence 4566778888899999999999999999999999999999999999999999988775443
No 72
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=51.40 E-value=4.7 Score=36.68 Aligned_cols=59 Identities=14% Similarity=0.276 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheecee
Q 028389 72 MVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGST 130 (209)
Q Consensus 72 ~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~ 130 (209)
++++...|-..+.+-|.+.-+==-++..++|.+++..+||++-+..-..||.+++.|-.
T Consensus 112 fi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~ 170 (347)
T KOG1442|consen 112 FILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFG 170 (347)
T ss_pred eeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhe
Confidence 34455577778888888877766788999999999999999999999999999999844
No 73
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=46.07 E-value=1.6e+02 Score=27.21 Aligned_cols=69 Identities=13% Similarity=0.193 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecCCc
Q 028389 71 TMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAE 139 (209)
Q Consensus 71 l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~~ 139 (209)
.-.++.-+++.|+.+..--...=-=+-=++=-+++..+.-+.|.+.+|.+...++.+|+.++.++...+
T Consensus 92 tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~ 160 (327)
T KOG1581|consen 92 TNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD 160 (327)
T ss_pred HhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence 345777788888887754332222234456667888889999999999999999999999998885544
No 74
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=41.04 E-value=27 Score=31.88 Aligned_cols=78 Identities=15% Similarity=0.223 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc-cchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecCCccc
Q 028389 64 LWWVGMITMVVGEIANFAAYAFA-PAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAERE 141 (209)
Q Consensus 64 ~W~~G~~l~~lG~~~~f~Al~fa-p~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~~~~ 141 (209)
.|..=..++-.-+..|=.|+.|. |..+=.=+=+-+++.|++++..++|.|-+.++...++++.+|.++.-+++.++..
T Consensus 66 ~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~ 144 (330)
T KOG1583|consen 66 DYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGR 144 (330)
T ss_pred hhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchh
Confidence 46655566556667777788876 4444444667899999999999999999999999999999999998888776643
No 75
>COG1008 NuoM NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]
Probab=39.56 E-value=93 Score=30.29 Aligned_cols=79 Identities=15% Similarity=0.211 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHhhHHHhhccCcccCCCCccccchhHHHHHHHHHH-------------HHHHHHHHHHhhccchhhh
Q 028389 26 SSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMV-------------VGEIANFAAYAFAPAILVT 92 (209)
Q Consensus 26 ~ss~~i~~g~vlqK~~~~~~~~~~~~a~~~~~~~l~~~~W~~G~~l~~-------------lG~~~~f~Al~fap~slV~ 92 (209)
.++.|..+|.+.+|.|.++.++-+ ...|+-.|..++.+.. +||..-+..- |..-.+++
T Consensus 339 sa~LFl~vG~iy~r~hTr~i~~~G--------Gl~~~mP~~aa~~~~~~mAs~glPG~sgFvgEFlil~G~-f~~~~~~~ 409 (497)
T COG1008 339 SAALFLLVGVLYERTHTRDIADLG--------GLANKMPKLAALFMLFAMASLGLPGTSGFVGEFLILLGS-FQVFPWVA 409 (497)
T ss_pred HHHHHHHHHHHHHhhcchhHHHhC--------CHHhhChHHHHHHHHHHHHhcCCCccchHHHHHHHHhhh-hhhhHHHH
Confidence 456777778777777655433321 2333334444443311 3444444332 44445788
Q ss_pred cchhhhHHHHHHHHHHHhhcc
Q 028389 93 PLGALSIIISAALAHIILRER 113 (209)
Q Consensus 93 PLga~~lv~~~ila~~~L~E~ 113 (209)
-+.+++++.++.-.-+..||.
T Consensus 410 ~la~~g~iltA~Y~L~~~~rv 430 (497)
T COG1008 410 FLAAFGLILTAVYMLWMYQRV 430 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999998888883
No 76
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=36.25 E-value=73 Score=25.23 Aligned_cols=32 Identities=25% Similarity=0.401 Sum_probs=24.2
Q ss_pred HHHHHHHHHH----HhhcccccccchhhhHheecee
Q 028389 99 IIISAALAHI----ILRERLHIFGILGCILCVVGST 130 (209)
Q Consensus 99 lv~~~ila~~----~L~E~l~~~~~~G~~l~i~G~~ 130 (209)
++.+.++-|+ .-|+++++++..|+++.+.|+.
T Consensus 102 l~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 102 LIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI 137 (138)
T ss_pred HHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 4445555554 3568899999999999999975
No 77
>PF04531 Phage_holin_1: Bacteriophage holin; InterPro: IPR006485 Phage proteins for bacterial lysis typically include a membrane-disrupting protein, or holin, and one or more cell wall degrading enzymes that reach the cell wall because of holin action. Holins are found in a large number of mutually non-homologous families. This entry is represented by the Bacteriophage phi-LC3, holin. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=31.49 E-value=89 Score=22.84 Aligned_cols=16 Identities=19% Similarity=0.654 Sum_probs=12.5
Q ss_pred ccchhHHHHHHHHHHH
Q 028389 59 YLYEPLWWVGMITMVV 74 (209)
Q Consensus 59 ~l~~~~W~~G~~l~~l 74 (209)
-+|||.||++++..++
T Consensus 7 R~kN~~~w~ali~~i~ 22 (84)
T PF04531_consen 7 RFKNKAFWVALISAIL 22 (84)
T ss_pred cccCHHHHHHHHHHHH
Confidence 4789999999876544
No 78
>KOG1638 consensus Steroid reductase [Lipid transport and metabolism]
Probab=31.29 E-value=1.6e+02 Score=26.30 Aligned_cols=59 Identities=14% Similarity=0.190 Sum_probs=39.1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhhHHHhhccCcccCCCCccccchhHHHHHHHHHHHHHHHHHHH
Q 028389 14 SSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGASGVRAGFGGYSYLYEPLWWVGMITMVVGEIANFAA 82 (209)
Q Consensus 14 ~~~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~~~~a~~~~~~~l~~~~W~~G~~l~~lG~~~~f~A 82 (209)
++..++-+++|+..|.++|. +|-+=....+.. ..+....++-.+|+.+++.|.+.|..+
T Consensus 108 ~~~p~~i~a~a~~F~~~NG~---lqg~y~~~~~~~-------~d~~~~~~r~liG~~lfv~Gm~iN~~s 166 (257)
T KOG1638|consen 108 NPSPAIIVALAIAFCTLNGT---LQGLYLSHYQLY-------EDPWVTDIRFLIGVVLFVTGMLINIYS 166 (257)
T ss_pred CCccHHHHHHHHHHHHhhHH---HHHHHHHhcccc-------cCCCchhHHHHHHHHHHHHHhhhhhhh
Confidence 57778889999999988873 333311111110 113455678889999999999998654
No 79
>PRK08541 flagellin; Validated
Probab=30.68 E-value=44 Score=28.92 Aligned_cols=21 Identities=24% Similarity=0.464 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 028389 21 LILALSSSIFIGSSFIVKKKG 41 (209)
Q Consensus 21 i~LAl~ss~~i~~g~vlqK~~ 41 (209)
++.|+.++++++.|+.+|+|+
T Consensus 19 LVAAVAA~VLInTsgfLQQKA 39 (211)
T PRK08541 19 LVAAVAAAVLINTSGYLQQKA 39 (211)
T ss_pred HHHHHHHHHhhcchhhhhHHH
Confidence 344999999999999999996
No 80
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=29.99 E-value=3.7e+02 Score=23.29 Aligned_cols=58 Identities=26% Similarity=0.340 Sum_probs=36.6
Q ss_pred chhHHHHHHHHHHHHHHHHH---HHHhhccchhhhcchh--hhHHHHHHHH-HHHhhccccccc
Q 028389 61 YEPLWWVGMITMVVGEIANF---AAYAFAPAILVTPLGA--LSIIISAALA-HIILRERLHIFG 118 (209)
Q Consensus 61 ~~~~W~~G~~l~~lG~~~~f---~Al~fap~slV~PLga--~~lv~~~ila-~~~L~E~l~~~~ 118 (209)
+||.||=+++...+....|. .+-+|.|.++=--|-. +.++-..+++ +|++|.+.+.+.
T Consensus 157 qr~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~~L~pi~l~IiGav~lalRfylkkk~NIqs 220 (226)
T COG4858 157 QRPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNPQLPPIALTIIGAVILALRFYLKKKKNIQS 220 (226)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCcCCchHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 46788888877666555553 5667788887444433 3344444444 677888888764
No 81
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=28.55 E-value=1.1e+02 Score=25.72 Aligned_cols=38 Identities=16% Similarity=-0.012 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHH
Q 028389 72 MVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHII 109 (209)
Q Consensus 72 ~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~ 109 (209)
..++..+...++...|++.++|..-+..+++++++.+.
T Consensus 218 t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 218 TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 55788899999999999999999999999999998764
No 82
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=26.35 E-value=5.4e+02 Score=24.00 Aligned_cols=120 Identities=19% Similarity=0.295 Sum_probs=73.3
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHhhHHHhhcc-----------------------CcccCCCCccccch--hHHH
Q 028389 12 GMSSDNIKGLILALSSSIFIGSSFIVKKKGLKKAGAS-----------------------GVRAGFGGYSYLYE--PLWW 66 (209)
Q Consensus 12 ~~~~~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~-----------------------~~~a~~~~~~~l~~--~~W~ 66 (209)
........|...-+.+++.-+..=++-.|-+++.... +.+++. -...+.- +.-|
T Consensus 176 ~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~-~~gff~G~s~~vw 254 (345)
T KOG2234|consen 176 SSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAIN-EYGFFYGYSSIVW 254 (345)
T ss_pred CcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccc-cCCccccccHHHH
Confidence 4456678888888877777666666655544332110 011110 0122221 2223
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeee
Q 028389 67 VGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTI 132 (209)
Q Consensus 67 ~G~~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lv 132 (209)
.=++.-++|-+.--.-..+|+=.+=.=-.+++++++++.+.++.+-+++..=.+|+.+++....+-
T Consensus 255 ~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY 320 (345)
T KOG2234|consen 255 LVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLY 320 (345)
T ss_pred HHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHh
Confidence 333444555555555556666555555567899999999988889999999999999988876654
No 83
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=26.18 E-value=98 Score=28.34 Aligned_cols=33 Identities=18% Similarity=0.315 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhhcccccccchhhhHheeceeee
Q 028389 100 IISAALAHIILRERLHIFGILGCILCVVGSTTI 132 (209)
Q Consensus 100 v~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lv 132 (209)
.++.+++-.+.+.++++..|+|++++..|+.+.
T Consensus 280 FvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~f 312 (330)
T KOG1583|consen 280 FVSLLFSIIYFENPFTPWHWLGAALVFFGTLLF 312 (330)
T ss_pred HHHHhheeeEecCCCCHHHHHHHHHHHHHHHHH
Confidence 467788888999999999999999999998864
No 84
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=25.03 E-value=25 Score=34.88 Aligned_cols=24 Identities=29% Similarity=0.533 Sum_probs=19.8
Q ss_pred hcccccccchhhhHheeceeeeEe
Q 028389 111 RERLHIFGILGCILCVVGSTTIVL 134 (209)
Q Consensus 111 ~E~l~~~~~~G~~l~i~G~~lvv~ 134 (209)
+|++.+.||+|+.|.+.|..++.+
T Consensus 233 ~~~l~~lD~IG~~L~~~Gl~LfLl 256 (599)
T PF06609_consen 233 REQLKELDWIGIFLFIAGLALFLL 256 (599)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHH
Confidence 466777899999999999887644
No 85
>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes. PMP22 seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information []. Mpv17 is a closely related peroxisomal protein involved in the development of early-onset glomerulosclerosis []. A member of this family found in Saccharomyces cerevisiae (Baker's yeast) is an integral membrane protein of the inner mitochondrial membrane and has been suggested to play a role in mitochondrial function during heat shock [].; GO: 0016021 integral to membrane
Probab=24.79 E-value=2.2e+02 Score=19.37 Aligned_cols=51 Identities=14% Similarity=0.138 Sum_probs=37.7
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhccchhhhc-chhhhHHHHHHHHHHH
Q 028389 59 YLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTP-LGALSIIISAALAHII 109 (209)
Q Consensus 59 ~l~~~~W~~G~~l~~lG~~~~f~Al~fap~slV~P-Lga~~lv~~~ila~~~ 109 (209)
-+|+..|-.=.....+-...+++.+.+.|...-.+ .+.+++++|+.++..-
T Consensus 15 ~l~~~~~~~~~~~~~~Wp~~~~vnF~~vP~~~Rv~~~~~v~~~W~~~LS~~~ 66 (68)
T PF04117_consen 15 KLKRDYWPTLKASWKFWPPAQIVNFRYVPPHYRVLFVNVVSFFWNTYLSYIA 66 (68)
T ss_pred HHHHHHHHHHHHHhHhHHHHHHHHhcccChhhhhhhhhhHHHHHHHHHHHHh
Confidence 34445554444555566778999999999998777 5678899999998763
No 86
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=24.61 E-value=67 Score=29.36 Aligned_cols=133 Identities=19% Similarity=0.236 Sum_probs=80.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhHHHhhcc----------------C-cccCCCCccccchhHHH---HHHHHHHHH
Q 028389 16 DNIKGLILALSSSIFIGSSFIVKKKGLKKAGAS----------------G-VRAGFGGYSYLYEPLWW---VGMITMVVG 75 (209)
Q Consensus 16 ~~~iGi~LAl~ss~~i~~g~vlqK~~~~~~~~~----------------~-~~a~~~~~~~l~~~~W~---~G~~l~~lG 75 (209)
+..-|...|+.|.++.+.=.++-|+-=++.+.- + ..-++-..|+-.+.+|. .|+.-+ +|
T Consensus 188 ~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~cgkdr~l~~~lGvfgf-ig 266 (346)
T KOG4510|consen 188 YDIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPHCGKDRWLFVNLGVFGF-IG 266 (346)
T ss_pred ccCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceecCccccceEEEEEehhhhh-HH
Confidence 445567888888888887777776621222110 0 00122245666666665 344333 56
Q ss_pred HHHHHHHHhhccchhhhcchhhhHHHHHHHHHHHhhcccccccchhhhHheeceeeeEeecCCccccCCHHHHH
Q 028389 76 EIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPAEREIESVIEVW 149 (209)
Q Consensus 76 ~~~~f~Al~fap~slV~PLga~~lv~~~ila~~~L~E~l~~~~~~G~~l~i~G~~lvv~~a~~~~~~~t~~el~ 149 (209)
++.-..++.--.+==++=+.-..+++..+.-..+.||--|.+.|.|.++++...+.+..-.-.+..+.+..|+.
T Consensus 267 QIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa~~~e~s~k~~~ 340 (346)
T KOG4510|consen 267 QILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWAGTNESSLKKLF 340 (346)
T ss_pred HHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHhccchhhHHHhh
Confidence 66666677654444444456788999999999999999999999998776655444333222223344444443
No 87
>PF08173 YbgT_YccB: Membrane bound YbgT-like protein; InterPro: IPR012994 This family contains a set of membrane proteins, typically 33 amino acids long. The family has no known function, but the protein is found in the operon CydAB in Escherichia coli. Members have a consensus motif (MWYFXW), which is rich in aromatic residues. The protein forms a single membrane-spanning helix. This family seems to be restricted to proteobacteria [].
Probab=23.59 E-value=1.2e+02 Score=17.94 Aligned_cols=19 Identities=26% Similarity=0.209 Sum_probs=15.6
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 028389 16 DNIKGLILALSSSIFIGSS 34 (209)
Q Consensus 16 ~~~iGi~LAl~ss~~i~~g 34 (209)
.|++|+.+|..-++++++-
T Consensus 5 aWilG~~lA~~~~i~~a~w 23 (28)
T PF08173_consen 5 AWILGVLLACAFGILNAMW 23 (28)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5789999999988887754
No 88
>MTH00033 CYTB cytochrome b; Provisional
Probab=22.27 E-value=4.6e+02 Score=24.56 Aligned_cols=44 Identities=23% Similarity=0.530 Sum_probs=30.4
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhhccchhhhcchhhhHHHHHHHHHH
Q 028389 58 SYLYEPLWWVGMITMVVGEIANFAAYAFAPAILVTPLGALSIIISAALAHI 108 (209)
Q Consensus 58 ~~l~~~~W~~G~~l~~lG~~~~f~Al~fap~slV~PLga~~lv~~~ila~~ 108 (209)
+|.|...|+.|+.++.+-....|..| +-|-++.|.-...+....
T Consensus 103 sY~r~~~W~~Gv~ll~l~m~~aF~GY-------vLpw~qms~w~~~Vitnl 146 (383)
T MTH00033 103 GYSRVLTWIVGVLIFFIMMLTAFIGY-------VLPWGQMSFWAATVITNL 146 (383)
T ss_pred cccChHHHHHhHHHHHHHHHHHHhhh-------cccccchhhHHHHHHHHh
Confidence 45567789999999877666667666 557777776554444433
No 89
>PRK11469 hypothetical protein; Provisional
Probab=22.06 E-value=3.9e+02 Score=22.29 Aligned_cols=14 Identities=21% Similarity=0.408 Sum_probs=9.9
Q ss_pred chhhhHheeceeee
Q 028389 119 ILGCILCVVGSTTI 132 (209)
Q Consensus 119 ~~G~~l~i~G~~lv 132 (209)
.-|++|+++|.-.+
T Consensus 169 lgG~iLI~iGi~il 182 (188)
T PRK11469 169 LGGLVLIGIGVQIL 182 (188)
T ss_pred HHHHHHHHHHHHHH
Confidence 66788888886543
No 90
>COG2245 Predicted membrane protein [Function unknown]
Probab=21.40 E-value=5e+02 Score=21.98 Aligned_cols=40 Identities=20% Similarity=0.002 Sum_probs=22.2
Q ss_pred CccccCCCCchhHHHHHHHH--HHHHHHHHHHHHHhhHHHhh
Q 028389 7 HSWRDGMSSDNIKGLILALS--SSIFIGSSFIVKKKGLKKAG 46 (209)
Q Consensus 7 ~~~~~~~~~~~~iGi~LAl~--ss~~i~~g~vlqK~~~~~~~ 46 (209)
|+|..+...-..+|..||-. -=+.+=.|...|||++..-+
T Consensus 87 ~~~~~~~~~~~~l~~~Lag~Vi~wIl~Iisayf~kkaleala 128 (182)
T COG2245 87 GTFMLPAHGLSALGSFLAGFVILWILYIISAYFQKKALEALA 128 (182)
T ss_pred ccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34443443444555555432 22455577889999865533
Done!