Query 028392
Match_columns 209
No_of_seqs 168 out of 758
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 17:51:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028392.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028392hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jon_A Beta-1,3-glucanase; oli 100.0 5E-36 1.7E-40 231.8 10.4 92 16-107 8-99 (101)
2 2w61_A GAS2P, glycolipid-ancho 99.9 8E-27 2.7E-31 222.6 2.3 93 18-112 395-499 (555)
3 1efe_A Mini-proinsulin, M2PI; 17.2 1.4E+02 0.0047 20.3 3.5 39 30-68 8-58 (60)
4 1b9g_A Protein (growth factor 16.9 75 0.0026 21.6 2.1 36 31-68 8-47 (57)
5 3lri_A Protein (insulin-like g 14.4 1.1E+02 0.0037 22.4 2.6 39 30-68 20-73 (83)
6 2v33_A E1 envelope glycoprotei 12.9 31 0.001 25.9 -0.8 23 85-107 20-42 (91)
7 2gsv_A Hypothetical protein YV 11.6 90 0.0031 22.5 1.4 9 68-76 28-36 (80)
8 1bqt_A Somatomedin C, insulin- 11.5 1.5E+02 0.005 20.7 2.4 13 31-43 8-20 (70)
9 3uw0_A Pectinesterase; right-h 8.8 77 0.0026 28.5 0.2 39 3-41 12-55 (364)
10 2wfu_B Probable insulin-like p 8.4 2.2E+02 0.0075 16.5 2.0 15 30-44 7-21 (26)
No 1
>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea}
Probab=100.00 E-value=5e-36 Score=231.79 Aligned_cols=92 Identities=46% Similarity=0.986 Sum_probs=88.4
Q ss_pred CCCCcceeecCCCChHHHHHHHHHhcCCCCCCcccCCCCCccCCCCchhhhhHHHHHHHHHhCCCCCCCCCCCceEEEec
Q 028392 16 HSTANWCVCKDGVGDPVLQKALDYACGAGADCNPIHSNGPCYNPNTVKAHCSYAVNSYFQRKGQAQGSCDFSGSATVATT 95 (209)
Q Consensus 16 ~~~slwCVak~~a~~~~Lq~~~dyACG~gaDCs~I~~gGsCySpcT~~~hlSYAfN~YYq~qg~~~~aCDF~G~Atitt~ 95 (209)
+..++|||+|+++++++||++|||||++++||++|++||+||+||++++|+|||||+|||++++..++|||+|.|+|++.
T Consensus 8 ~~~~~wCVak~~~~~~~l~~~ldyACg~gaDC~~I~~gg~Cy~p~t~~~haSyAfN~YYq~~~~~~~aCdF~G~A~it~~ 87 (101)
T 2jon_A 8 KAAGSWCVPKPGVSDDQLTGNINYACSQGIDCGPIQPGGACFEPNTVKAHAAYVMNLYYQHAGRNSWNCDFSQTATLTNT 87 (101)
T ss_dssp CCCSCEEEECTTSCHHHHHHHHHHHTTTSSSSSTTCCCSSSCSSCCTTHHHHHHHHHHHHHHTSSGGGCCSCSSEEEESS
T ss_pred CCCCcEEEECCCCCHHHHHHHHHHHcCCCCCccccCcCCcccCCCCHHHHHHHHHHHHHHHcCCCCCccCCCCeEEEeec
Confidence 45789999999999999999999999987899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccc
Q 028392 96 DPSTAGCSYPSS 107 (209)
Q Consensus 96 dPS~~sC~fp~~ 107 (209)
|||.++|+|+++
T Consensus 88 dPS~g~C~f~~~ 99 (101)
T 2jon_A 88 NPSYGACNFPSG 99 (101)
T ss_dssp CCCCSSSCCCCS
T ss_pred CCCCCceecCCC
Confidence 999999999863
No 2
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A*
Probab=99.92 E-value=8e-27 Score=222.60 Aligned_cols=93 Identities=15% Similarity=0.260 Sum_probs=85.4
Q ss_pred CCcceeecCC-CChHHHHHHHHHhcCCCCCCcccCCCCC-----ccCCCCchhhhhHHHHHHHHHhCCCCCCCCCCCc--
Q 028392 18 TANWCVCKDG-VGDPVLQKALDYACGAGADCNPIHSNGP-----CYNPNTVKAHCSYAVNSYFQRKGQAQGSCDFSGS-- 89 (209)
Q Consensus 18 ~slwCVak~~-a~~~~Lq~~~dyACG~gaDCs~I~~gGs-----CySpcT~~~hlSYAfN~YYq~qg~~~~aCDF~G~-- 89 (209)
+++|||+|++ +++++||++|||||++ +||++|++||+ ||+||++++|||||||+|||+++++.++|||+|.
T Consensus 395 ~~~~Cv~~~~~~~~~~l~~~~~yaC~~-~dC~~I~~~g~~g~yG~~~~~~~~~~~Sya~n~yyq~~~~~~~~C~F~g~~~ 473 (555)
T 2w61_A 395 EILPCEIVPFGAESGKYEEYFSYLCSK-VDCSDILANGKTGEYGEFSDCSVEQKLSLQLSKLYCKIGANDRHCPLNDKNV 473 (555)
T ss_dssp HHCSEEECCTTCCGGGHHHHHHHHTTT-SCGGGGCEETTTTEECTTTTSCHHHHHHHHHHHHHHHHCCCSSCCSCCCTTE
T ss_pred cCCeeecCCCCCCHHHHHHHHHHHhCc-CCCccccCCCcCCCccccCCCCHHHHHHHHHHHHHHHcCCCCCCCCCCCCcc
Confidence 3589999999 9999999999999997 89999999999 6999999999999999999999999999999999
Q ss_pred ----eEEEecCCCCCCcccccccccCC
Q 028392 90 ----ATVATTDPSTAGCSYPSSASTSG 112 (209)
Q Consensus 90 ----Atitt~dPS~~sC~fp~~~ssaG 112 (209)
|+++ .|||.++|+|+.+....+
T Consensus 474 ~~~~a~~~-~~~s~~~C~~~~~~~~~~ 499 (555)
T 2w61_A 474 YFNLESLQ-PLTSESICKNVFDSIRNI 499 (555)
T ss_dssp EECGGGGS-CCCTTCTTHHHHHHHHHH
T ss_pred cccceEEE-eCCCCCchHhHHHhhhcc
Confidence 9998 789999999875544334
No 3
>1efe_A Mini-proinsulin, M2PI; linker, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.1.1.1
Probab=17.18 E-value=1.4e+02 Score=20.32 Aligned_cols=39 Identities=26% Similarity=0.380 Sum_probs=24.2
Q ss_pred hHHHHHHHHHhcCC-CCCCcccC-------CCCC----ccCCCCchhhhhH
Q 028392 30 DPVLQKALDYACGA-GADCNPIH-------SNGP----CYNPNTVKAHCSY 68 (209)
Q Consensus 30 ~~~Lq~~~dyACG~-gaDCs~I~-------~gGs----CySpcT~~~hlSY 68 (209)
-.+|.++|.++|+. +..=.+.. ..|- |+.+|+..+=.+|
T Consensus 8 G~~L~daL~~vC~~rgf~~~p~~rr~~~r~~RGIvdECC~~~Ct~~~L~~Y 58 (60)
T 1efe_A 8 GSHLVEALYLVCGERGFFYTPKTRRYPGDVKRGIVEQCCTSICSLYQLENY 58 (60)
T ss_dssp HHHHHHHHHHHHCSSCCCCCCCCCSSSCTTCCSHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCcccCCccccccCCCCCCcHhhcCCCCCChHHHHHh
Confidence 36899999999986 32111221 1122 8999987765555
No 4
>1b9g_A Protein (growth factor IGF-1); NMR {Homo sapiens} SCOP: g.1.1.1
Probab=16.94 E-value=75 Score=21.64 Aligned_cols=36 Identities=22% Similarity=0.463 Sum_probs=23.8
Q ss_pred HHHHHHHHHhcCCCCCCcccCCCCC----ccCCCCchhhhhH
Q 028392 31 PVLQKALDYACGAGADCNPIHSNGP----CYNPNTVKAHCSY 68 (209)
Q Consensus 31 ~~Lq~~~dyACG~gaDCs~I~~gGs----CySpcT~~~hlSY 68 (209)
++|.++|.++|+...- -....|- |+.+|+..+=.+|
T Consensus 8 ~~L~~aL~~vC~~rgf--~~~k~GIvdECC~~~Ct~~~L~~Y 47 (57)
T 1b9g_A 8 AELVDALQFVCGDRGF--YFNKPGIVDECCFRSCDLRRLEMY 47 (57)
T ss_dssp TTHHHHHHTTCSSSSC--CTTCCSHHHHHTTSSCCSSSGGGT
T ss_pred HHHHHHHHHHHcCCCc--cCCCCCcHhhhcCCCCCHHHHHHh
Confidence 5688999999986210 0112232 8999998876666
No 5
>3lri_A Protein (insulin-like growth factor I); protein structure, distance geometry; NMR {Homo sapiens} SCOP: g.1.1.1
Probab=14.39 E-value=1.1e+02 Score=22.36 Aligned_cols=39 Identities=26% Similarity=0.544 Sum_probs=23.7
Q ss_pred hHHHHHHHHHhcCC-CCC-Cccc---------CCCCC----ccCCCCchhhhhH
Q 028392 30 DPVLQKALDYACGA-GAD-CNPI---------HSNGP----CYNPNTVKAHCSY 68 (209)
Q Consensus 30 ~~~Lq~~~dyACG~-gaD-Cs~I---------~~gGs----CySpcT~~~hlSY 68 (209)
-.+|-+.|.++|+. +.. =.+- ...|- ||.+|++.+=.+|
T Consensus 20 G~~LvdaL~~VCg~rGf~~~~p~~~g~~~rR~~krGIVdECC~~~Csl~~Le~Y 73 (83)
T 3lri_A 20 GAELVDALQFVCGDRGFYFNKPTGYGSSSRRACQTGIVDECCFRSCDLRRLEMY 73 (83)
T ss_dssp CTHHHHHHHHHHHTTCCCSSCCCSBTTBSSSCSTTCTTHHHHHTTCCHHHHHHH
T ss_pred hHHHHHHHHHHhCcCceeecCCcccCCccccccCCCchHHhCCCCCCHHHHHHh
Confidence 37899999999975 221 1110 11122 7999987766655
No 6
>2v33_A E1 envelope glycoprotein; transmembrane, viral protein; 1.55A {Semliki forest virus} SCOP: b.1.18.4
Probab=12.93 E-value=31 Score=25.91 Aligned_cols=23 Identities=30% Similarity=0.485 Sum_probs=18.2
Q ss_pred CCCCceEEEecCCCCCCcccccc
Q 028392 85 DFSGSATVATTDPSTAGCSYPSS 107 (209)
Q Consensus 85 DF~G~Atitt~dPS~~sC~fp~~ 107 (209)
||+|.|.|.......|+|...+.
T Consensus 20 DFGGvatl~Y~a~k~GkCaVHs~ 42 (91)
T 2v33_A 20 DFGGVLTLTYKTNKNGDCSVHSH 42 (91)
T ss_dssp EEEEEEEEEEEESSCEEEEEECC
T ss_pred CCCCeEEEEEecCCCccceeecc
Confidence 89999999976666799975543
No 7
>2gsv_A Hypothetical protein YVFG; alpha-helical protein, structural genomics, PSI, protein structure initiative; 1.90A {Bacillus subtilis} SCOP: a.23.7.1 PDB: 2js1_A
Probab=11.60 E-value=90 Score=22.49 Aligned_cols=9 Identities=44% Similarity=0.814 Sum_probs=7.5
Q ss_pred HHHHHHHHH
Q 028392 68 YAVNSYFQR 76 (209)
Q Consensus 68 YAfN~YYq~ 76 (209)
-|||+||+.
T Consensus 28 hAmNaYYrs 36 (80)
T 2gsv_A 28 HAMNSYYRS 36 (80)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 489999975
No 8
>1bqt_A Somatomedin C, insulin-like growth factor-I; NMR {Homo sapiens} SCOP: g.1.1.1 PDB: 1gzr_B* 1gzy_B* 1gzz_B* 1h02_B* 1h59_A 1imx_A* 1pmx_A 1wqj_I 2dsp_I 2dsq_I 2dsr_I 2gf1_A 3gf1_A
Probab=11.46 E-value=1.5e+02 Score=20.71 Aligned_cols=13 Identities=38% Similarity=0.813 Sum_probs=10.7
Q ss_pred HHHHHHHHHhcCC
Q 028392 31 PVLQKALDYACGA 43 (209)
Q Consensus 31 ~~Lq~~~dyACG~ 43 (209)
.+|-++|.++|+.
T Consensus 8 ~~L~daL~~vC~~ 20 (70)
T 1bqt_A 8 AELVDALQFVCGD 20 (70)
T ss_dssp STTHHHHHHHSCS
T ss_pred HHHHHHHHHHhCC
Confidence 4578899999986
No 9
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=8.85 E-value=77 Score=28.51 Aligned_cols=39 Identities=21% Similarity=0.068 Sum_probs=9.4
Q ss_pred HHHHHHHHHHhhcC-CC--CcceeecC-CC-ChHHHHHHHHHhc
Q 028392 3 VLVLLALFLGFTGH-ST--ANWCVCKD-GV-GDPVLQKALDYAC 41 (209)
Q Consensus 3 ~~~~~~l~~~~~~~-~~--slwCVak~-~a-~~~~Lq~~~dyAC 41 (209)
.|+|++|++.+... +. ...-|.++ +. +-..+|+++|.+=
T Consensus 12 ~l~~~l~~~~~~~~~~~~~~~~~V~~~~g~g~f~TIq~Ai~aa~ 55 (364)
T 3uw0_A 12 TLWLGLISFAVLGTVNAAQYNAVVSTTPQGDEFSSINAALKSAP 55 (364)
T ss_dssp --------------------------------CCCHHHHHHHSC
T ss_pred HHHHHHHHHhccccccccCceEEEcCCCCCCCcccHHHHHhhcc
Confidence 34444444444332 22 22555554 32 3467999999764
No 10
>2wfu_B Probable insulin-like peptide 5 B chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster} PDB: 2wfv_B
Probab=8.45 E-value=2.2e+02 Score=16.45 Aligned_cols=15 Identities=40% Similarity=0.707 Sum_probs=12.0
Q ss_pred hHHHHHHHHHhcCCC
Q 028392 30 DPVLQKALDYACGAG 44 (209)
Q Consensus 30 ~~~Lq~~~dyACG~g 44 (209)
-.+|-++++-+|+.|
T Consensus 7 G~~L~eaL~~vC~~G 21 (26)
T 2wfu_B 7 GPALMDMLRVACPNG 21 (26)
T ss_dssp HHHHHHHHHHHCSSC
T ss_pred hHHHHHHHHHHHhcc
Confidence 367899999999753
Done!