Query 028392
Match_columns 209
No_of_seqs 168 out of 758
Neff 4.4
Searched_HMMs 13730
Date Mon Mar 25 17:51:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028392.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/028392hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wqji1 g.1.1.1 (I:2-63) Insul 37.5 10 0.00073 24.9 2.5 38 31-68 7-59 (62)
2 d2v5pc1 g.1.1.1 (C:6-63) Insul 35.5 15 0.0011 23.8 3.1 38 31-68 6-54 (58)
3 d2gsva1 a.23.7.1 (A:3-69) Hypo 13.4 35 0.0025 22.3 1.4 9 68-76 26-34 (67)
4 d2v33a1 b.1.18.4 (A:293-382) F 12.8 15 0.0011 25.8 -0.8 23 85-107 19-41 (90)
5 g1mso.1 g.1.1.1 (B:,A:) Insuli 10.6 43 0.0032 21.0 1.1 39 28-68 6-49 (51)
6 d2dlka1 g.37.1.1 (A:8-37) Zinc 9.9 47 0.0034 18.5 0.9 12 83-94 2-13 (30)
7 d1iq0a1 a.27.1.1 (A:467-592) A 7.8 59 0.0043 22.5 1.0 29 60-88 63-91 (126)
8 d1cc5a_ a.3.1.1 (A:) Cytochrom 6.2 1.5E+02 0.011 18.2 2.3 14 27-40 67-80 (83)
9 d2e74h1 f.23.27.1 (H:3-29) Pet 6.0 92 0.0067 16.8 0.9 16 194-209 8-23 (27)
10 d1nkla_ a.64.1.1 (A:) NK-lysin 5.9 2.3E+02 0.017 17.0 3.2 37 25-76 19-55 (78)
No 1
>d1wqji1 g.1.1.1 (I:2-63) Insulin-like growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.54 E-value=10 Score=24.91 Aligned_cols=38 Identities=29% Similarity=0.586 Sum_probs=23.6
Q ss_pred HHHHHHHHHhcCC-CCCCcccCCCC------C--------ccCCCCchhhhhH
Q 028392 31 PVLQKALDYACGA-GADCNPIHSNG------P--------CYNPNTVKAHCSY 68 (209)
Q Consensus 31 ~~Lq~~~dyACG~-gaDCs~I~~gG------s--------CySpcT~~~hlSY 68 (209)
.+|-++|-++||. |..=.+-..-+ . ||++|++.+-.+|
T Consensus 7 s~LvdaL~~VCG~rGfy~~~~~~~~~~~~~r~krGIVeeCC~~~C~l~~Le~Y 59 (62)
T d1wqji1 7 AELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMY 59 (62)
T ss_dssp HHHHHHHHHHHGGGCBCSEEECSSCCBTTBCSEEEHHHHHTTTCCCHHHHHTT
T ss_pred HHHHHHHHHHHccCCCCcCCCCCCCcccccCCCCChhhhccCCCCCHHHHHhh
Confidence 6789999999986 43321110000 0 8999988765544
No 2
>d2v5pc1 g.1.1.1 (C:6-63) Insulin-like growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.46 E-value=15 Score=23.76 Aligned_cols=38 Identities=21% Similarity=0.472 Sum_probs=22.2
Q ss_pred HHHHHHHHHhcCC-CCC-CcccCCCCC---------ccCCCCchhhhhH
Q 028392 31 PVLQKALDYACGA-GAD-CNPIHSNGP---------CYNPNTVKAHCSY 68 (209)
Q Consensus 31 ~~Lq~~~dyACG~-gaD-Cs~I~~gGs---------CySpcT~~~hlSY 68 (209)
.+|-++|-++||. |.- =.+...... |+++|++.+--+|
T Consensus 6 s~LVdaL~~VCg~rGfy~~~~~~~~~r~~rGIVeeCC~~~C~l~~Le~Y 54 (58)
T d2v5pc1 6 GELVDTLQFVCGDRGFYFSRPASRVSRRSRGIVEECCFRSCDLALLETY 54 (58)
T ss_dssp HHHHHHHHHHSTTSCBCCCC----------CHHHHHTSSCCCSHHHHTT
T ss_pred HHHHHHHHHHHcCCCccccCCccccCCCCCCchhhcCCCCCCHHHHHHh
Confidence 5789999999997 322 111111111 8999988765444
No 3
>d2gsva1 a.23.7.1 (A:3-69) Hypothetical protein YvfG {Bacillus subtilis [TaxId: 1423]}
Probab=13.42 E-value=35 Score=22.35 Aligned_cols=9 Identities=44% Similarity=0.814 Sum_probs=7.6
Q ss_pred HHHHHHHHH
Q 028392 68 YAVNSYFQR 76 (209)
Q Consensus 68 YAfN~YYq~ 76 (209)
-|||+||+.
T Consensus 26 hAmNaYYrs 34 (67)
T d2gsva1 26 HAMNSYYRS 34 (67)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 489999975
No 4
>d2v33a1 b.1.18.4 (A:293-382) Fusion glycoprotein E1 {Semliki forest virus [TaxId: 11033]}
Probab=12.82 E-value=15 Score=25.83 Aligned_cols=23 Identities=30% Similarity=0.485 Sum_probs=18.0
Q ss_pred CCCCceEEEecCCCCCCcccccc
Q 028392 85 DFSGSATVATTDPSTAGCSYPSS 107 (209)
Q Consensus 85 DF~G~Atitt~dPS~~sC~fp~~ 107 (209)
||+|.|+|.......|+|...+.
T Consensus 19 DfGGvatl~Y~a~k~GkCaVHs~ 41 (90)
T d2v33a1 19 DFGGVLTLTYKTNKNGDCSVHSH 41 (90)
T ss_dssp EEEEEEEEEEEESSCEEEEEECC
T ss_pred CcCCeEEEEEecCCCccceeEcC
Confidence 89999999966666799975443
No 5
>g1mso.1 g.1.1.1 (B:,A:) Insulin {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.59 E-value=43 Score=20.99 Aligned_cols=39 Identities=26% Similarity=0.400 Sum_probs=14.5
Q ss_pred CChHHHHHHHHHhcCC-CCCCcccCCCCC----ccCCCCchhhhhH
Q 028392 28 VGDPVLQKALDYACGA-GADCNPIHSNGP----CYNPNTVKAHCSY 68 (209)
Q Consensus 28 a~~~~Lq~~~dyACG~-gaDCs~I~~gGs----CySpcT~~~hlSY 68 (209)
.=-++|-++|-++||. |.-=.+ ..|- |+++|++.+--.|
T Consensus 6 LCGs~LVdaL~~vCg~rGf~~~p--~~GIVeqCC~~~C~~~~Le~Y 49 (51)
T g1mso.1 6 LCGSHLVEALYLVCGERGFFYTP--KTGIVEQCCTSICSLYQLENY 49 (51)
T ss_dssp CCTHHHHHHHHHHHGGGCEEECC--CC-------------------
T ss_pred cccHHHHHHHHHHHccCCcccCC--CCChHHHhcCCCCCHHHHHhh
Confidence 3457899999999986 311111 1121 8999987654443
No 6
>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.87 E-value=47 Score=18.49 Aligned_cols=12 Identities=33% Similarity=0.924 Sum_probs=9.5
Q ss_pred CCCCCCceEEEe
Q 028392 83 SCDFSGSATVAT 94 (209)
Q Consensus 83 aCDF~G~Atitt 94 (209)
.|||.|-+.|.+
T Consensus 2 ~cdf~gc~kifs 13 (30)
T d2dlka1 2 PCDFPGCGRIFS 13 (30)
T ss_dssp ECSSTTTCCEES
T ss_pred CCCCCCchhhhc
Confidence 499999888764
No 7
>d1iq0a1 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]}
Probab=7.85 E-value=59 Score=22.48 Aligned_cols=29 Identities=10% Similarity=0.123 Sum_probs=19.3
Q ss_pred CCchhhhhHHHHHHHHHhCCCCCCCCCCC
Q 028392 60 NTVKAHCSYAVNSYFQRKGQAQGSCDFSG 88 (209)
Q Consensus 60 cT~~~hlSYAfN~YYq~qg~~~~aCDF~G 88 (209)
|..-..++=+||+||+..+-....|.+.+
T Consensus 63 ~~yl~~La~~F~~fY~~~~~~~~~~~i~~ 91 (126)
T d1iq0a1 63 AQYLLDLAASWNAYYNARENGQPATPVLT 91 (126)
T ss_dssp HHHHHHHHHHHHHHHHCEETTEESSCSTT
T ss_pred HHHHHHHHHHHHHHHHhcccccccccccC
Confidence 33456678899999997665555555443
No 8
>d1cc5a_ a.3.1.1 (A:) Cytochrome c5 {Azotobacter vinelandii [TaxId: 354]}
Probab=6.16 E-value=1.5e+02 Score=18.24 Aligned_cols=14 Identities=21% Similarity=0.245 Sum_probs=12.4
Q ss_pred CCChHHHHHHHHHh
Q 028392 27 GVGDPVLQKALDYA 40 (209)
Q Consensus 27 ~a~~~~Lq~~~dyA 40 (209)
..+++++.++++|+
T Consensus 67 ~Lsd~ei~~vv~Yi 80 (83)
T d1cc5a_ 67 DCSDDELKAAIGKM 80 (83)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 47899999999997
No 9
>d2e74h1 f.23.27.1 (H:3-29) PetN subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=6.03 E-value=92 Score=16.76 Aligned_cols=16 Identities=44% Similarity=0.951 Sum_probs=8.7
Q ss_pred HHHHHHHHHhhhhccC
Q 028392 194 SFLVVLLFSGSMLLWG 209 (209)
Q Consensus 194 ~~~~~~~~~~~~~~~~ 209 (209)
+++..+--+..|.+||
T Consensus 8 ~llvvftwsiamvvwg 23 (27)
T d2e74h1 8 ALLVVFTWSIAMVVWG 23 (27)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHhhheeeeEEEc
Confidence 3344444445778884
No 10
>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]}
Probab=5.90 E-value=2.3e+02 Score=17.03 Aligned_cols=37 Identities=14% Similarity=0.338 Sum_probs=26.2
Q ss_pred cCCCChHHHHHHHHHhcCCCCCCcccCCCCCccCCCCchhhhhHHHHHHHHH
Q 028392 25 KDGVGDPVLQKALDYACGAGADCNPIHSNGPCYNPNTVKAHCSYAVNSYFQR 76 (209)
Q Consensus 25 k~~a~~~~Lq~~~dyACG~gaDCs~I~~gGsCySpcT~~~hlSYAfN~YYq~ 76 (209)
+++..++++.+.++.+|.. -| ..++.+...+++|+..
T Consensus 19 ~~~~t~~~I~~~l~~~C~~--------------lp-~~~~~C~~~v~~y~~~ 55 (78)
T d1nkla_ 19 GPQPNEDTVTQAASQVCDK--------------LK-ILRGLCKKIMRSFLRR 55 (78)
T ss_dssp CSSCCHHHHHHHHHHHHHH--------------SC-STHHHHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHhc--------------CC-cHHHHHHHHHHHHHHH
Confidence 3456788999999999964 12 3566677777777753
Done!