BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 028400
         (209 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9ZQR6|SPZ2_ARATH Serpin-Z2 OS=Arabidopsis thaliana GN=At2g14540 PE=2 SV=1
          Length = 407

 Score = 34.3 bits (77), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 12/117 (10%)

Query: 18  SNNDSIRSFLLS------ASEDVQLPRELRETALNLSSLNKAP-YKSIRQIWVGSLPSIR 70
           ++N ++RSF+LS        E   +  EL        S    P   ++  +W+    S  
Sbjct: 77  TDNKTLRSFILSFLKSSSTEETNAIFHELASVVFKDGSETGGPKIAAVNGVWMEQSLSCN 136

Query: 71  PDLFRLF-SGSEFVFTSPKPREKSEELKARLRQLAERAERDEYRELVKDILPKSSAT 126
           PD   LF +  +  F     R K+EE++  +   A R   D    L+K+ILP+ S T
Sbjct: 137 PDWEDLFLNFFKASFAKVDFRHKAEEVRLDVNTWASRHTND----LIKEILPRGSVT 189


>sp|Q27772|C1TC_SPOFR C-1-tetrahydrofolate synthase, cytoplasmic OS=Spodoptera
          frugiperda PE=2 SV=3
          Length = 933

 Score = 33.1 bits (74), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 14/27 (51%), Positives = 22/27 (81%), Gaps = 2/27 (7%)

Query: 31 SEDVQLPRELRETAL--NLSSLNKAPY 55
          +E +QLPR++ ET L  N++SLN++PY
Sbjct: 66 AEHIQLPRDITETELLANITSLNESPY 92


>sp|B3ETH9|MNME_AMOA5 tRNA modification GTPase MnmE OS=Amoebophilus asiaticus (strain
           5a2) GN=mnmE PE=3 SV=1
          Length = 455

 Score = 32.3 bits (72), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 6/64 (9%)

Query: 54  PYKSIRQIWVGS-LPSIRPDLFRLFSGSEFVFTSPKPREKSEELKARLRQLAERAERDEY 112
           PY     I VG+ L + +PDL +  S  +FVF S   ++   +L+AR+ +L +  + D  
Sbjct: 330 PY-----IKVGNKLDAAQPDLLKALSQEDFVFISTAKKQHLGQLEARILELFQLDQLDNS 384

Query: 113 RELV 116
             +V
Sbjct: 385 DTIV 388


>sp|P07636|TRA_BPMU Transposase OS=Enterobacteria phage Mu GN=A PE=1 SV=2
          Length = 663

 Score = 31.2 bits (69), Expect = 5.3,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 38/94 (40%)

Query: 30  ASEDVQLPRELRETALNLSSLNKAPYKSIRQIWVGSLPSIRPDLFRLFSGSEFVFTSPKP 89
           A  D    RE R     L S  KA  K+ +Q+    +  + P +    +    +    +P
Sbjct: 564 AFNDAAAGREYRRRQKQLKSATKAAIKAQKQMDALEVAELLPQIAEPAAPESRIVGIFRP 623

Query: 90  REKSEELKARLRQLAERAERDEYRELVKDILPKS 123
              +E +K + R      ERDEY     DIL ++
Sbjct: 624 SGNTERVKNQERDDEYETERDEYLNHSLDILEQN 657


>sp|O04582|SPZ5_ARATH Probable non-inhibitory serpin-Z5 OS=Arabidopsis thaliana
           GN=At1g62170 PE=2 SV=2
          Length = 433

 Score = 30.8 bits (68), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 23  IRSFLLSASEDV--QLPRELRETALNLSSLNKAPYKSI-RQIWVGSLPSIRP---DLFRL 76
           I SFL S+S D    + RE+    L   S    P  ++   +W+    S+ P   DLF+ 
Sbjct: 122 ILSFLKSSSTDELNAIFREIASVVLVDGSKKGGPKIAVVNGMWMDQSLSVNPLSKDLFKN 181

Query: 77  FSGSEFVFTSPKPREKSEELKARLRQLAERAERDEYRELVKDILPKSSAT 126
           F  +   F     R K+EE++  +   A          L+KD+LP+ S T
Sbjct: 182 FFSA--AFAQVDFRSKAEEVRTEVNAWAS----SHTNGLIKDLLPRGSVT 225


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.131    0.360 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,733,963
Number of Sequences: 539616
Number of extensions: 2642087
Number of successful extensions: 9973
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 9970
Number of HSP's gapped (non-prelim): 30
length of query: 209
length of database: 191,569,459
effective HSP length: 112
effective length of query: 97
effective length of database: 131,132,467
effective search space: 12719849299
effective search space used: 12719849299
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)