BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028404
(209 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8WVE0|N6MT2_HUMAN N(6)-adenine-specific DNA methyltransferase 2 OS=Homo sapiens
GN=N6AMT2 PE=2 SV=1
Length = 214
Score = 163 bits (413), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 112/174 (64%), Gaps = 10/174 (5%)
Query: 38 EDDDRPMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDAVTA 97
EDD+ P LS+ ALAALQEF +EQ Q E E D + ++ E+W+LSQFWY TA
Sbjct: 5 EDDETPQLSAHALAALQEFYAEQKQQIEPG----EDDKYNIGIIEENWQLSQFWYSQETA 60
Query: 98 ETVAQEAVSLCSDSDSRVACIACPTLYAYLKKI-RPEVSPKILEYDMRFEQYGSDFAFYD 156
+AQEA++ + R+AC++ P++Y L+++ R S I EYD RF YG +F FYD
Sbjct: 61 LQLAQEAIAAVGEG-GRIACVSAPSVYQKLRELCRENFSIYIFEYDKRFAMYGEEFIFYD 119
Query: 157 YNQPQDLPLELK-HAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTG 209
YN P DLP + H+F +V+ DPPYLS+ECL K SETV +L R K+LL TG
Sbjct: 120 YNNPLDLPERIAAHSFDIVIADPPYLSEECLRKTSETVKYLTR---GKILLCTG 170
>sp|Q9CY45|N6MT2_MOUSE N(6)-adenine-specific DNA methyltransferase 2 OS=Mus musculus
GN=N6amt2 PE=2 SV=1
Length = 214
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 111/174 (63%), Gaps = 10/174 (5%)
Query: 38 EDDDRPMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDAVTA 97
EDDD P LSS LAALQEF +EQ Q+ N D V ++ E+W+LSQFWY TA
Sbjct: 5 EDDDIPQLSSHTLAALQEFYAEQKQSV----NPRGDDKYNVGVIEENWQLSQFWYSQDTA 60
Query: 98 ETVAQEAVSLCSDSDSRVACIACPTLYAYLKKI-RPEVSPKILEYDMRFEQYGSDFAFYD 156
+A+EA+ + R+AC++ P++Y L+++ R + S I EYD RF YG +F FYD
Sbjct: 61 LRLAREAIDAAGEG-GRIACVSAPSVYQKLRELCREDSSVYIFEYDRRFAIYGDEFIFYD 119
Query: 157 YNQPQDLPLELK-HAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTG 209
YN P +LP + H+F +VV DPPYLS+ECL K SET+ FL R K+LL TG
Sbjct: 120 YNHPLELPERIAAHSFDLVVADPPYLSEECLRKTSETIQFLTR---GKILLCTG 170
>sp|Q6GN98|N6MT2_XENLA N(6)-adenine-specific DNA methyltransferase 2 OS=Xenopus laevis
GN=n6amt2 PE=2 SV=1
Length = 220
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 116/175 (66%), Gaps = 7/175 (4%)
Query: 37 EEDDDRPMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDAVT 96
++DD P LSS ALAALQEF +EQ Q E + + + V V EDW+LSQFWY T
Sbjct: 5 DDDDGVPQLSSHALAALQEFYAEQQQR-EAQKLGPDHEKFSVGSVEEDWQLSQFWYSDET 63
Query: 97 AETVAQEAVSLCSDSDSRVACIACPTLYAYLKKIRPE-VSPKILEYDMRFEQYGSDFAFY 155
A ++A+EA+ +C + + R+ACI+ P++Y L+ + E V ++LEYD RF YG DF FY
Sbjct: 64 ALSLAKEAIEVCGE-NGRIACISAPSIYQKLRGLAGESVYIRLLEYDNRFAVYGDDFVFY 122
Query: 156 DYNQPQDLPLELK-HAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTG 209
DYN+P LP L+ +F +V+ DPPYLS+ECL+ ++T+ L+R K++L TG
Sbjct: 123 DYNEPLKLPESLEPSSFDIVIADPPYLSEECLQNTAQTIKHLSR---GKIILCTG 174
>sp|Q17QF2|N6MT2_BOVIN N(6)-adenine-specific DNA methyltransferase 2 OS=Bos taurus
GN=N6AMT2 PE=2 SV=1
Length = 226
Score = 150 bits (378), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 9/174 (5%)
Query: 38 EDDDRPMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDAVTA 97
E++ P LSS ALAALQEF +EQ + D + ++ E+W+LSQFWY TA
Sbjct: 5 ENEGPPQLSSYALAALQEFYAEQQHHH---SDLCGDDKYNIGIIEENWQLSQFWYSPETA 61
Query: 98 ETVAQEAVSLCSDSDSRVACIACPTLYAYLK-KIRPEVSPKILEYDMRFEQYGSDFAFYD 156
+A++AV+ + R+AC++ P++Y L+ + R +VS I EYD RF YG DF +YD
Sbjct: 62 TCLAEDAVAAAGEG-GRIACVSAPSVYQKLRERHRDDVSVCIFEYDRRFAIYGEDFVYYD 120
Query: 157 YNQPQDLPLEL-KHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTG 209
Y P DLP + H+F +VV DPPYLS+ECL K+SET+ L R K+LL TG
Sbjct: 121 YKNPVDLPERIATHSFDIVVADPPYLSEECLRKMSETIKLLTR---GKILLCTG 171
>sp|Q5ZKT6|N6MT2_CHICK N(6)-adenine-specific DNA methyltransferase 2 OS=Gallus gallus
GN=N6AMT2 PE=2 SV=1
Length = 213
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 105/169 (62%), Gaps = 7/169 (4%)
Query: 43 PMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDAVTAETVAQ 102
P LSS LAALQEF EQ Q E + + V + EDW+LSQFWY TA +A
Sbjct: 9 PQLSSHTLAALQEFYLEQQQ-REGMKTSQGFNQYSVGSIEEDWQLSQFWYSDETASCLAN 67
Query: 103 EAVSLCSDSDSRVACIACPTLYAYLK-KIRPEVSPKILEYDMRFEQYGSDFAFYDYNQPQ 161
EA+ + + R+AC++ P++Y L+ + + S ILEYD RF YG +F FYDYN P
Sbjct: 68 EAI-VAAGKGGRIACVSAPSVYQKLREQGGADFSVCILEYDRRFSVYGEEFIFYDYNNPL 126
Query: 162 DLPLEL-KHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTG 209
+LP L H+F +VV DPPYLS+ECL+K +ET+ +L + K+LL TG
Sbjct: 127 NLPEHLLPHSFDIVVADPPYLSEECLQKTAETIKYLTK---GKILLCTG 172
>sp|Q86A24|N6MT2_DICDI N(6)-adenine-specific DNA methyltransferase 2 homolog
OS=Dictyostelium discoideum GN=DDB_G0272708 PE=3 SV=1
Length = 211
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 102/172 (59%), Gaps = 15/172 (8%)
Query: 40 DDRPMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDAVTAET 99
DD LS ++L+ALQ+F + Q+K E +SEDW+LSQFWY+ T++
Sbjct: 6 DDEITLSKESLSALQDFYKSREVEQ---QDKFE--------ISEDWQLSQFWYEEETSKF 54
Query: 100 VAQEAVSLCSDSDSRVACIACPTLYAYLKKIRPEVSPKI-LEYDMRFEQYGSDFAFYDYN 158
VA + + + V C++ P++Y L K + EYD RF+ YG F FYDYN
Sbjct: 55 VAN-VIEQETIGGNVVVCLSTPSIYKVLHKNNNLLLNNNLFEYDKRFDVYGEKFHFYDYN 113
Query: 159 QPQD-LPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTG 209
P+D + +LK + +DPP+LS+EC+EKV++T++ L +P ++LLLLTG
Sbjct: 114 NPEDGISEQLKGNVDYICLDPPFLSEECIEKVAKTIALLRKPT-TRLLLLTG 164
>sp|Q5WRN3|N6MT2_CAEEL N(6)-adenine-specific DNA methyltransferase 2 homolog
OS=Caenorhabditis elegans GN=M142.8 PE=3 SV=1
Length = 218
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 16/179 (8%)
Query: 40 DDRPMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDAVTAET 99
DD P LS+ LAAL F +EQ + E Q S + + EDW+LSQFWYD T+
Sbjct: 5 DDIPQLSADTLAALSMFQAEQQEKIEQLQ------SGIIEKIDEDWQLSQFWYDDETSRK 58
Query: 100 VAQEAVSLCSDSD----SRVACIACPTLYAYLKKIR----PEVSPKILEYDMRFE-QYGS 150
+ E V+ + +R+ C++ PTL + + ++ + E+D RF ++ +
Sbjct: 59 LVAEGVAAALEGSEARPARIGCVSSPTLVKFFHETEEYKTGQIQLTLFEFDDRFGLKFPT 118
Query: 151 DFAFYDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTG 209
+F YDY P DLP EL F V++ DPP+L+ ECL K + ++ L + D K+LL TG
Sbjct: 119 EFVHYDYKHPTDLPAELLAKFDVIIADPPFLAAECLIKTAHSIRLLGK-SDVKVLLCTG 176
>sp|Q9VMH7|N6MT2_DROME N(6)-adenine-specific DNA methyltransferase 2 homolog OS=Drosophila
melanogaster GN=CG9154 PE=2 SV=2
Length = 223
Score = 107 bits (266), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 97/179 (54%), Gaps = 11/179 (6%)
Query: 40 DDRPMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDAVTAET 99
DD L + LA L EFL E+++ +N+ + + + A EDW+LSQFWY T
Sbjct: 2 DDDISLPADTLAILNEFLLERSKREAEEENQIANKTGKDAQFEEDWQLSQFWYSTETKHA 61
Query: 100 VAQEAVSLCSD-----SDSRVACIACPTLYAYLKKIRPEVSPKILEYDMRFEQYGSDFAF 154
+ L ++ D +A ++CP+LY +++I V I E+D RFE YG+DF
Sbjct: 62 LRDVVRKLLAERTEDSGDFSIALLSCPSLYKDIREIHDTVH--IFEFDKRFEAYGTDFVH 119
Query: 155 YDYNQPQDLPLELK---HAFSVVVVDPPYLSKECLEKVSETVSFLAR-PGDSKLLLLTG 209
YD N P LK + ++V DPP+LS+EC+ K E ++ L R +SK++L +G
Sbjct: 120 YDLNCVGSNPDYLKEHHQQYDLIVADPPFLSQECIAKTCEIITRLQRNQKESKVILCSG 178
>sp|Q6NYP8|N6MT2_DANRE N(6)-adenine-specific DNA methyltransferase 2 OS=Danio rerio
GN=n6amt2 PE=2 SV=1
Length = 166
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 79/128 (61%), Gaps = 9/128 (7%)
Query: 87 LSQFWYDAVTAETVAQEAVSLCSDSDSRVACIACPTLYAYLKKIRP----EVSPKILEYD 142
+SQFWY TA +A+E + + R+AC++ P++Y LK++ VS +LE+D
Sbjct: 1 MSQFWYSEETASRLAEELLQQAGE-HGRIACLSAPSVYQKLKQLESVRSDGVSAVLLEFD 59
Query: 143 MRFEQYGSDFAFYDYNQPQDLPLE-LKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGD 201
RF YG +F FYDYN P LP + L +F +V+ DPPYLS+ECL KV+ TV L +
Sbjct: 60 RRFAAYGDEFVFYDYNNPLCLPEDLLPQSFDIVIADPPYLSEECLSKVTLTVKHLTK--- 116
Query: 202 SKLLLLTG 209
K+LL TG
Sbjct: 117 GKILLCTG 124
>sp|P53200|AML1_YEAST N(6)-adenine-specific DNA methyltransferase-like 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=AML1 PE=1
SV=2
Length = 248
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 18/174 (10%)
Query: 45 LSSQALAALQEFLSEQNQTSETAQNKTESDSDE----------VALVSEDWRLSQFWYDA 94
LS+ ALAAL+EF E+ Q E Q K ++DE + L EDW+LSQFWY
Sbjct: 14 LSANALAALEEFKREEQQHQEAFQ-KLYDETDEDFQKKKKEEGMKLFKEDWQLSQFWYSD 72
Query: 95 VTAETVAQEAVSLCSDSDSRVACIACPTLYAYLKKIRPEVSPK----ILEYDMRFEQY-G 149
TA +A +A+ +D ++ +A ++ P++YA ++K P + E+D RFE G
Sbjct: 73 DTAAILA-DAILEGADENTVIAIVSAPSVYAAIQKKPTNEIPTEHIYLFEFDKRFELLAG 131
Query: 150 SD-FAFYDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDS 202
D F FYDYN+P D E+K +++DPP+L+++C K S T L P D+
Sbjct: 132 RDHFFFYDYNKPLDFSDEIKGKVDRLLIDPPFLNEDCQTKSSITAKCLLAPNDN 185
>sp|Q01118|SCN7A_HUMAN Sodium channel protein type 7 subunit alpha OS=Homo sapiens
GN=SCN7A PE=2 SV=2
Length = 1682
Score = 33.9 bits (76), Expect = 0.81, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 24 RKQNAPKN-----DDVEVEEDDDRPMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEV 78
+ QN PK+ ++V V+ED LS L+ Q+FL ++ ++S T +N TE++S +
Sbjct: 769 KTQNVPKDTMDHVNEVYVKEDISDHTLSE--LSNTQDFLKDKEKSSGTEKNATENESQSL 826
>sp|A6US51|Y1427_METVS UPF0218 protein Mevan_1427 OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=Mevan_1427 PE=3 SV=1
Length = 158
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 151 DFAFYDYNQPQDLPLELKHAFSVV--VVDPP-YLSKECLEKVS 190
D + D+ +++P+E+ H F V V +PP Y+S E +E++
Sbjct: 49 DLSILDFKTKRNVPVEIPHKFKTVFEVYNPPGYISDEAIERIK 91
>sp|P36120|DBP7_YEAST ATP-dependent RNA helicase DBP7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP7 PE=1 SV=1
Length = 742
Score = 31.2 bits (69), Expect = 4.9, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 165 LELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTG 209
L+L H SV+ +DPP+ ++ L +V T G+S L LL G
Sbjct: 527 LDLPHVGSVIELDPPFAVEDHLHRVGRTAR-AGEKGESLLFLLPG 570
>sp|A6ZZY8|DBP7_YEAS7 ATP-dependent RNA helicase DBP7 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP7 PE=3 SV=1
Length = 742
Score = 31.2 bits (69), Expect = 4.9, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 165 LELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTG 209
L+L H SV+ +DPP+ ++ L +V T G+S L LL G
Sbjct: 527 LDLPHVGSVIELDPPFAVEDHLHRVGRTAR-AGEKGESLLFLLPG 570
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.127 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,628,649
Number of Sequences: 539616
Number of extensions: 2799288
Number of successful extensions: 8722
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 8633
Number of HSP's gapped (non-prelim): 81
length of query: 209
length of database: 191,569,459
effective HSP length: 112
effective length of query: 97
effective length of database: 131,132,467
effective search space: 12719849299
effective search space used: 12719849299
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)