Your job contains 1 sequence.
>028405
MATGAALLSLRSPPFLSNPKTLHQSPCRASPSFLPIKAAATSSSSSLPTLPLKTPKITPL
SPLLNDSTRTVTTLLSLSGFLLKFAISKIPTLPQPTTNLVQSVGPLFFAALRERPSGSLN
TPLTVVAAGLAKWLDIYSGVLLVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPP
VFDTLDVSPLLAFAVLGTLAQILTFSRGA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028405
(209 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132907 - symbol:YLMG1-2 "AT4G27990" species:3... 498 1.2e-47 1
TAIR|locus:2079656 - symbol:YLMG1-1 "AT3G07430" species:3... 478 1.6e-45 1
TAIR|locus:504956451 - symbol:YLMG2 "AT5G21920" species:3... 183 3.0e-14 1
UNIPROTKB|Q3AAH5 - symbol:CHY_2040 "Putative uncharacteri... 140 1.1e-09 1
TIGR_CMR|CHY_2040 - symbol:CHY_2040 "conserved hypothetic... 140 1.1e-09 1
UNIPROTKB|Q81WE1 - symbol:BAS3749 "YlmG protein" species:... 127 2.6e-08 1
TIGR_CMR|BA_4037 - symbol:BA_4037 "ylmG protein" species:... 127 2.6e-08 1
TAIR|locus:2158906 - symbol:CCB3 "AT5G36120" species:3702... 123 6.8e-08 1
UNIPROTKB|Q71XY4 - symbol:LMOf2365_2061 "YGGT family prot... 89 0.00038 1
UNIPROTKB|Q0BX65 - symbol:HNE_3255 "Putative uncharacteri... 87 0.00065 1
>TAIR|locus:2132907 [details] [associations]
symbol:YLMG1-2 "AT4G27990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR003425
Pfam:PF02325 EMBL:CP002687 GO:GO:0016020 GO:GO:0009941
EMBL:AL161572 EMBL:AL035524 ProtClustDB:CLSN2721564 EMBL:AK226522
IPI:IPI00530022 PIR:T02900 RefSeq:NP_194528.1 UniGene:At.22789
PRIDE:Q9SUE0 EnsemblPlants:AT4G27990.1 GeneID:828912
KEGG:ath:AT4G27990 TAIR:At4g27990 InParanoid:Q9SUE0 OMA:SKWLDIY
PhylomeDB:Q9SUE0 ArrayExpress:Q9SUE0 Genevestigator:Q9SUE0
Uniprot:Q9SUE0
Length = 218
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 96/126 (76%), Positives = 109/126 (86%)
Query: 83 KFAISKIPTLPQPTTNLVQSVGPLFFAALRERPSGSLNTPLTVVAAGLAKWLDIYSGVLL 142
K +++ + PQ + ++ PLFFA+LR+RP+G LNTPLTVVAAGL+KWLDIYSGVL+
Sbjct: 94 KLSVAIVNLSPQIQASF-RTASPLFFASLRDRPAGYLNTPLTVVAAGLSKWLDIYSGVLM 152
Query: 143 VRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLAQI 202
VRVLLSWFPNIPW+RQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTL I
Sbjct: 153 VRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSI 212
Query: 203 LTFSRG 208
L SRG
Sbjct: 213 LNNSRG 218
>TAIR|locus:2079656 [details] [associations]
symbol:YLMG1-1 "AT3G07430" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016020 "membrane"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0010020 "chloroplast fission" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0090143 "nucleoid
organization" evidence=IMP] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR003425 Pfam:PF02325
EMBL:CP002686 GO:GO:0009941 GO:GO:0010020 GO:GO:0042651
EMBL:AC009853 GO:GO:0090143 EMBL:AY099847 EMBL:BT006263
IPI:IPI00528367 RefSeq:NP_566307.1 UniGene:At.28189 STRING:Q9SRS3
PRIDE:Q9SRS3 DNASU:819931 EnsemblPlants:AT3G07430.1 GeneID:819931
KEGG:ath:AT3G07430 TAIR:At3g07430 InParanoid:Q9SRS3 OMA:PSLSIQN
PhylomeDB:Q9SRS3 ProtClustDB:CLSN2721564 ArrayExpress:Q9SRS3
Genevestigator:Q9SRS3 Uniprot:Q9SRS3
Length = 232
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 93/128 (72%), Positives = 104/128 (81%)
Query: 82 LKFAI-SKIPTLPQPTTNLVQSVGPLFFAALRERPSGSLNTPLTVVAAGLAKWLDIYSGV 140
L AI + P + + + GP+FFA+LR+RP G LNTPLTVVA G+ KWLDIYSGV
Sbjct: 105 LSLAIQTSSPVIADGLRFSLSTAGPVFFASLRDRPPGYLNTPLTVVAVGIKKWLDIYSGV 164
Query: 141 LLVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLA 200
L+VRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLLAFAVLGTL
Sbjct: 165 LMVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLG 224
Query: 201 QILTFSRG 208
I+ S G
Sbjct: 225 SIVHGSTG 232
>TAIR|locus:504956451 [details] [associations]
symbol:YLMG2 "AT5G21920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR003425 Pfam:PF02325 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016020 EMBL:AC140977 EMBL:AL589883
KO:K02221 EMBL:BT005265 EMBL:AK118444 IPI:IPI00516557
RefSeq:NP_680180.1 UniGene:At.44737 UniGene:At.75172
EnsemblPlants:AT5G21920.1 GeneID:832252 KEGG:ath:AT5G21920
TAIR:At5g21920 HOGENOM:HOG000090706 InParanoid:Q9C595 OMA:MALPCEL
PhylomeDB:Q9C595 ProtClustDB:CLSN2690179 Genevestigator:Q9C595
Uniprot:Q9C595
Length = 251
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 40/73 (54%), Positives = 53/73 (72%)
Query: 125 VVAAGLAKWLDIYSGVLLVRVLLSWFPNIPWER-QPLSAIRDLCDPYLNLFRNIIPPVFD 183
VVA GL +L+IY+ +L+VR++L+WFP+ P PLS LCDPYLN+FR IPP+
Sbjct: 133 VVANGLINFLNIYNTILVVRLVLTWFPSAPPAIVNPLST---LCDPYLNIFRGFIPPL-G 188
Query: 184 TLDVSPLLAFAVL 196
LD+SP+LAF VL
Sbjct: 189 GLDLSPILAFLVL 201
>UNIPROTKB|Q3AAH5 [details] [associations]
symbol:CHY_2040 "Putative uncharacterized protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003425 Pfam:PF02325 GO:GO:0016020
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0762 KO:K02221
HOGENOM:HOG000048869 RefSeq:YP_360859.1 STRING:Q3AAH5
GeneID:3727880 KEGG:chy:CHY_2040 PATRIC:21277161 OMA:NARESRF
ProtClustDB:CLSK842071 BioCyc:CHYD246194:GJCN-2039-MONOMER
Uniprot:Q3AAH5
Length = 87
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 135 DIYSGVLLVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFA 194
+IY ++++RVLL+W P + ++ I L DPYLNLFR +IPPV +D SP++AF
Sbjct: 13 NIYGWLIIIRVLLTWIP-VNTYHPVVNFITSLTDPYLNLFRRLIPPV-GMIDFSPIVAFF 70
Query: 195 VL 196
VL
Sbjct: 71 VL 72
>TIGR_CMR|CHY_2040 [details] [associations]
symbol:CHY_2040 "conserved hypothetical protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003425 Pfam:PF02325 GO:GO:0016020
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0762 KO:K02221
HOGENOM:HOG000048869 RefSeq:YP_360859.1 STRING:Q3AAH5
GeneID:3727880 KEGG:chy:CHY_2040 PATRIC:21277161 OMA:NARESRF
ProtClustDB:CLSK842071 BioCyc:CHYD246194:GJCN-2039-MONOMER
Uniprot:Q3AAH5
Length = 87
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 135 DIYSGVLLVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFA 194
+IY ++++RVLL+W P + ++ I L DPYLNLFR +IPPV +D SP++AF
Sbjct: 13 NIYGWLIIIRVLLTWIP-VNTYHPVVNFITSLTDPYLNLFRRLIPPV-GMIDFSPIVAFF 70
Query: 195 VL 196
VL
Sbjct: 71 VL 72
>UNIPROTKB|Q81WE1 [details] [associations]
symbol:BAS3749 "YlmG protein" species:1392 "Bacillus
anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003425
Pfam:PF02325 GO:GO:0016020 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR KO:K02221 HOGENOM:HOG000048869
RefSeq:NP_846277.1 RefSeq:YP_020679.1 RefSeq:YP_030000.1
TCDB:9.A.4.2.1 DNASU:1086657 EnsemblBacteria:EBBACT00000008750
EnsemblBacteria:EBBACT00000013883 EnsemblBacteria:EBBACT00000023912
GeneID:1086657 GeneID:2817303 GeneID:2848061 KEGG:ban:BA_4037
KEGG:bar:GBAA_4037 KEGG:bat:BAS3749 OMA:LATICEP
ProtClustDB:CLSK917205 BioCyc:BANT260799:GJAJ-3807-MONOMER
BioCyc:BANT261594:GJ7F-3925-MONOMER Uniprot:Q81WE1
Length = 87
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 134 LDIYSGVLLVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLA- 192
++IYS L++ +LLSWFP E + +C+PYL FR IPP+ +D+SPL+A
Sbjct: 12 IEIYSWALIIYILLSWFPGAK-ESTFGDFLARICEPYLEPFRRFIPPL-GMIDISPLVAI 69
Query: 193 FAV-LGTLAQILTF 205
FA+ L T + F
Sbjct: 70 FALKLATSGLVTLF 83
>TIGR_CMR|BA_4037 [details] [associations]
symbol:BA_4037 "ylmG protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003425
Pfam:PF02325 GO:GO:0016020 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR KO:K02221 HOGENOM:HOG000048869
RefSeq:NP_846277.1 RefSeq:YP_020679.1 RefSeq:YP_030000.1
TCDB:9.A.4.2.1 DNASU:1086657 EnsemblBacteria:EBBACT00000008750
EnsemblBacteria:EBBACT00000013883 EnsemblBacteria:EBBACT00000023912
GeneID:1086657 GeneID:2817303 GeneID:2848061 KEGG:ban:BA_4037
KEGG:bar:GBAA_4037 KEGG:bat:BAS3749 OMA:LATICEP
ProtClustDB:CLSK917205 BioCyc:BANT260799:GJAJ-3807-MONOMER
BioCyc:BANT261594:GJ7F-3925-MONOMER Uniprot:Q81WE1
Length = 87
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 134 LDIYSGVLLVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLA- 192
++IYS L++ +LLSWFP E + +C+PYL FR IPP+ +D+SPL+A
Sbjct: 12 IEIYSWALIIYILLSWFPGAK-ESTFGDFLARICEPYLEPFRRFIPPL-GMIDISPLVAI 69
Query: 193 FAV-LGTLAQILTF 205
FA+ L T + F
Sbjct: 70 FALKLATSGLVTLF 83
>TAIR|locus:2158906 [details] [associations]
symbol:CCB3 "AT5G36120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0010190 "cytochrome b6f complex assembly" evidence=IMP]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0043085 "positive regulation of catalytic
activity" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR003425
Pfam:PF02325 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009535
GO:GO:0010190 eggNOG:COG0762 EMBL:AY092993 EMBL:AY114603
EMBL:AK221434 IPI:IPI00528870 RefSeq:NP_198461.2 UniGene:At.30557
STRING:Q8RWM7 PaxDb:Q8RWM7 PRIDE:Q8RWM7 EnsemblPlants:AT5G36120.1
GeneID:833608 KEGG:ath:AT5G36120 TAIR:At5g36120
HOGENOM:HOG000149119 InParanoid:Q8RWM7 OMA:KVIPPLA PhylomeDB:Q8RWM7
ProtClustDB:CLSN2690212 ArrayExpress:Q8RWM7 Genevestigator:Q8RWM7
Uniprot:Q8RWM7
Length = 174
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 31/114 (27%), Positives = 60/114 (52%)
Query: 96 TTNLVQSVGPLFFAALRERPSGSLNTPLTVVAAG-LAKWLDIYSGVLLVRVLLSWFPNIP 154
TTNL++ + +LR L+ +A G L L + + ++R+++SW+P +P
Sbjct: 52 TTNLIRQTNSIS-ESLRNISLADLDPGTAKLAIGILGPALSAFGFLFILRIVMSWYPKLP 110
Query: 155 WERQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLAQILTFSRG 208
++ P +P L R +IPP+ +DV+P++ F ++ L++IL +G
Sbjct: 111 VDKFPYVLAYAPTEPILVQTRKVIPPLAG-VDVTPVVWFGLVSFLSEILVGPQG 163
>UNIPROTKB|Q71XY4 [details] [associations]
symbol:LMOf2365_2061 "YGGT family protein" species:265669
"Listeria monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003425 Pfam:PF02325 GO:GO:0016020
EMBL:AE017262 GenomeReviews:AE017262_GR eggNOG:COG0762 KO:K02221
HOGENOM:HOG000048869 RefSeq:YP_014654.1 STRING:Q71XY4
GeneID:2799131 KEGG:lmf:LMOf2365_2061 PATRIC:20325417 OMA:VILFVIR
ProtClustDB:CLSK564720 Uniprot:Q71XY4
Length = 96
Score = 89 (36.4 bits), Expect = 0.00038, P = 0.00038
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 130 LAKWLDIYSGVLLVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSP 189
+ +WL ++ + L+SWFP E + + + +P L FR IIPP+ D+S
Sbjct: 15 IIRWLPT---LMFIYFLMSWFPGAR-ESKIGQFLARIFEPILEPFRRIIPPI-GMFDISS 69
Query: 190 LLAFAVLGTLAQILT 204
L+A+ + ++LT
Sbjct: 70 LVAYFIFQYAMRVLT 84
>UNIPROTKB|Q0BX65 [details] [associations]
symbol:HNE_3255 "Putative uncharacterized protein"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003425 Pfam:PF02325 GO:GO:0016020 EMBL:CP000158
GenomeReviews:CP000158_GR eggNOG:COG0762 KO:K02221
RefSeq:YP_761928.1 STRING:Q0BX65 GeneID:4287283 KEGG:hne:HNE_3255
PATRIC:32219391 HOGENOM:HOG000048869 OMA:TEPLYRP
BioCyc:HNEP228405:GI69-3257-MONOMER Uniprot:Q0BX65
Length = 102
Score = 87 (35.7 bits), Expect = 0.00065, P = 0.00065
Identities = 21/89 (23%), Positives = 46/89 (51%)
Query: 122 PLTVVAAGLAKWLDIYSGVLLVRVLLSWFP--NI-----PWERQPLSAIRDLCDPYLNLF 174
P+ + + L+I + +++++ +LSW N+ P R S + + +P
Sbjct: 5 PMAAILDVILVILNIITWIIIIQAILSWLLTFNVISLSNPTVRSIWSGLERMTEPVYRPI 64
Query: 175 RNIIPPVFDTLDVSPLLAFAVLGTLAQIL 203
RN++PP+ LD++PL+ ++ L Q++
Sbjct: 65 RNLLPPM-QGLDLTPLIVLLIIFFLRQVI 92
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.140 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 209 167 0.00075 108 3 11 22 0.48 31
30 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 584 (62 KB)
Total size of DFA: 142 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.11u 0.12s 15.23t Elapsed: 00:00:01
Total cpu time: 15.11u 0.12s 15.23t Elapsed: 00:00:01
Start: Mon May 20 17:07:52 2013 End: Mon May 20 17:07:53 2013