Query 028407
Match_columns 209
No_of_seqs 161 out of 1092
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 11:02:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028407.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028407hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03002 oxidoreductase, 2OG-F 100.0 9.5E-54 2.1E-58 372.3 20.0 196 10-206 135-330 (332)
2 PTZ00273 oxidase reductase; Pr 100.0 1E-51 2.2E-56 358.1 18.5 186 9-201 131-316 (320)
3 PLN02254 gibberellin 3-beta-di 100.0 9E-52 2E-56 362.7 17.0 189 5-199 155-347 (358)
4 PLN03001 oxidoreductase, 2OG-F 100.0 1.1E-51 2.4E-56 348.4 16.3 184 6-198 67-251 (262)
5 PLN02156 gibberellin 2-beta-di 100.0 4.8E-51 1E-55 355.2 18.1 185 10-200 130-318 (335)
6 PLN02750 oxidoreductase, 2OG-F 100.0 3.7E-51 8.1E-56 357.7 17.5 186 9-201 147-333 (345)
7 PLN02639 oxidoreductase, 2OG-F 100.0 4.9E-51 1.1E-55 356.0 17.0 185 9-202 144-330 (337)
8 PLN02904 oxidoreductase 100.0 5.5E-51 1.2E-55 357.8 17.1 186 7-201 160-346 (357)
9 PLN02216 protein SRG1 100.0 4.9E-51 1.1E-55 358.2 16.3 186 9-203 163-351 (357)
10 PLN02997 flavonol synthase 100.0 1.1E-50 2.3E-55 352.0 17.1 183 5-196 131-316 (325)
11 PLN02758 oxidoreductase, 2OG-F 100.0 1E-50 2.2E-55 356.7 17.0 186 7-201 163-351 (361)
12 PLN02912 oxidoreductase, 2OG-F 100.0 1.1E-50 2.4E-55 354.9 16.6 185 9-202 151-338 (348)
13 PLN02704 flavonol synthase 100.0 1.2E-50 2.6E-55 353.2 16.0 183 4-195 146-331 (335)
14 PLN02515 naringenin,2-oxogluta 100.0 3.1E-50 6.8E-55 353.0 18.6 183 9-199 149-332 (358)
15 PLN02365 2-oxoglutarate-depend 100.0 2.5E-50 5.4E-55 346.5 17.4 183 10-204 107-293 (300)
16 PLN02485 oxidoreductase 100.0 5.1E-50 1.1E-54 348.7 18.6 189 6-199 134-328 (329)
17 PLN02276 gibberellin 20-oxidas 100.0 4.6E-50 9.9E-55 352.6 17.0 180 10-198 161-341 (361)
18 PLN02947 oxidoreductase 100.0 2.7E-50 5.8E-55 355.1 15.3 184 9-201 176-363 (374)
19 PLN03178 leucoanthocyanidin di 100.0 3E-50 6.5E-55 353.8 15.5 187 7-202 160-351 (360)
20 PLN02393 leucoanthocyanidin di 100.0 3.4E-49 7.3E-54 347.2 16.0 184 6-198 161-349 (362)
21 PLN02299 1-aminocyclopropane-1 100.0 4.3E-49 9.3E-54 341.5 15.5 183 9-200 109-298 (321)
22 PLN00417 oxidoreductase, 2OG-F 100.0 2.9E-48 6.4E-53 339.6 16.2 174 8-190 155-331 (348)
23 PLN02984 oxidoreductase, 2OG-F 100.0 2.6E-47 5.7E-52 332.4 17.0 170 10-198 153-326 (341)
24 KOG0143 Iron/ascorbate family 100.0 4.2E-47 9E-52 328.8 16.5 186 7-201 127-315 (322)
25 COG3491 PcbC Isopenicillin N s 100.0 1.6E-46 3.4E-51 315.8 16.4 182 9-198 128-311 (322)
26 PLN02403 aminocyclopropanecarb 100.0 3.7E-46 7.9E-51 320.7 16.2 175 7-197 102-283 (303)
27 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.9 3.1E-25 6.8E-30 160.4 7.5 94 57-160 2-98 (98)
28 PF13640 2OG-FeII_Oxy_3: 2OG-F 96.3 0.003 6.4E-08 45.0 2.3 80 59-158 1-99 (100)
29 PRK05467 Fe(II)-dependent oxyg 95.0 0.18 3.9E-06 41.9 8.4 47 96-159 130-177 (226)
30 PF12851 Tet_JBP: Oxygenase do 94.5 0.48 1E-05 37.6 9.5 71 77-159 86-170 (171)
31 smart00702 P4Hc Prolyl 4-hydro 94.1 0.59 1.3E-05 36.7 9.3 107 25-159 58-178 (178)
32 PRK15401 alpha-ketoglutarate-d 92.5 3.1 6.8E-05 34.3 11.3 82 58-157 117-211 (213)
33 PF13532 2OG-FeII_Oxy_2: 2OG-F 87.2 1.2 2.7E-05 35.2 4.9 81 57-156 97-193 (194)
34 TIGR02466 conserved hypothetic 78.9 33 0.00073 27.9 11.2 37 110-158 160-198 (201)
35 TIGR00568 alkb DNA alkylation 77.7 20 0.00043 28.3 8.2 63 57-128 95-162 (169)
36 PF13759 2OG-FeII_Oxy_5: Putat 77.6 3.1 6.8E-05 29.6 3.3 36 109-156 63-100 (101)
37 COG3128 PiuC Uncharacterized i 59.3 32 0.00069 28.0 5.7 23 137-159 156-180 (229)
38 COG2140 Thermophilic glucose-6 59.1 25 0.00055 28.8 5.2 68 58-134 91-158 (209)
39 KOG3710 EGL-Nine (EGLN) protei 57.4 34 0.00074 28.7 5.7 69 78-159 162-238 (280)
40 COG3145 AlkB Alkylated DNA rep 40.1 59 0.0013 26.4 4.6 51 77-128 118-173 (194)
41 COG2879 Uncharacterized small 37.6 37 0.0008 22.4 2.4 22 180-201 38-59 (65)
42 PRK02289 4-oxalocrotonate taut 26.3 90 0.002 19.7 2.9 26 22-47 15-40 (60)
43 cd00491 4Oxalocrotonate_Tautom 26.1 99 0.0021 18.9 3.1 26 22-47 14-39 (58)
44 PRK01964 4-oxalocrotonate taut 25.1 99 0.0021 19.6 3.0 26 22-47 15-40 (64)
45 PF01361 Tautomerase: Tautomer 24.7 74 0.0016 19.9 2.3 26 22-47 14-39 (60)
46 TIGR00013 taut 4-oxalocrotonat 23.2 1.3E+02 0.0027 18.9 3.2 26 22-47 15-40 (63)
47 PRK02220 4-oxalocrotonate taut 22.5 1.2E+02 0.0026 18.9 3.0 26 22-47 15-40 (61)
48 PLN00052 prolyl 4-hydroxylase; 22.1 5.3E+02 0.011 22.4 8.2 115 26-162 111-254 (310)
49 PF08066 PMC2NT: PMC2NT (NUC01 20.9 1.3E+02 0.0028 20.9 3.1 29 11-39 24-52 (91)
No 1
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=9.5e-54 Score=372.30 Aligned_cols=196 Identities=65% Similarity=1.156 Sum_probs=175.3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCCccceeeeccccCCCCCCCCCcccccccCCCCceeE
Q 028407 10 FHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITL 89 (209)
Q Consensus 10 ~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~lTl 89 (209)
.|+||+.+++|+++|.+++..|+++||++||+++++|.+......+.+.+|++||||. ++++...+|+++|||+|+|||
T Consensus 135 ~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~lrl~~YP~~-~~~~~~~~g~~~HTD~g~lTl 213 (332)
T PLN03002 135 LPGWRETMEKYHQEALRVSMAIAKLLALALDLDVGYFDRTEMLGKPIATMRLLRYQGI-SDPSKGIYACGAHSDFGMMTL 213 (332)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhccccccCCCchheeeeeCCCC-CCcccCccccccccCCCeEEE
Confidence 5789999999999999999999999999999999999843355666789999999994 444445789999999999999
Q ss_pred EeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeecccccccCCCCCceEEEEccCCCCCCeEecC
Q 028407 90 LATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLGTGRERYSIAFFVEPSHDCLVECL 169 (209)
Q Consensus 90 l~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~~~~~~R~Si~~F~~p~~d~~i~p~ 169 (209)
|+||+++||||+.+.+..+|+|++|+|.||++|||+||+||+||||+|+|++|||+.++.+|||++||+.|+.|++|+|+
T Consensus 214 L~qd~v~GLQV~~~~~~~~g~Wi~Vpp~pg~~VVNiGD~L~~wTng~~kSt~HRVv~~~~~R~Sia~F~~p~~d~~i~pl 293 (332)
T PLN03002 214 LATDGVMGLQICKDKNAMPQKWEYVPPIKGAFIVNLGDMLERWSNGFFKSTLHRVLGNGQERYSIPFFVEPNHDCLVECL 293 (332)
T ss_pred EeeCCCCceEEecCCCCCCCcEEECCCCCCeEEEEHHHHHHHHhCCeeECcCCeecCCCCCeeEEEEEecCCCCeeEecC
Confidence 99999999999875322346899999999999999999999999999999999999666789999999999999999999
Q ss_pred CCCCCCCCCCCCCCccHHHHHHHHHHhhhcccccccc
Q 028407 170 PTCKSDKNPPKFPPIKCETYLSQRYKDTHADLNMYNK 206 (209)
Q Consensus 170 ~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~~~~~~~~ 206 (209)
++++++++|++|+|++++||+..++.+.|..+....+
T Consensus 294 ~~~~~~~~p~~y~~~~~~e~l~~~~~~~~~~~~~~~~ 330 (332)
T PLN03002 294 PTCKSESDLPKYPPIKCSTYLTQRYEETHAKLSIYHQ 330 (332)
T ss_pred CcccCCCCcccCCCccHHHHHHHHHHHHhhhhccccC
Confidence 9999999999999999999999999999986665544
No 2
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=1e-51 Score=358.12 Aligned_cols=186 Identities=39% Similarity=0.734 Sum_probs=170.9
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCCccceeeeccccCCCCCCCCCcccccccCCCCcee
Q 028407 9 CFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLIT 88 (209)
Q Consensus 9 ~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~lT 88 (209)
..|+||+.+++|+++|.+++..|++++|++||+++++|. ..+..+.+.+|++||||.+ .+.+..+|+++|||+|+||
T Consensus 131 ~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~lrl~~YP~~~-~~~~~~~g~~~HTD~g~lT 207 (320)
T PTZ00273 131 QVEGWMELMETHYRDMQALALVLLRALALAIGLREDFFD--SKFMEPLSVFRMKHYPALP-QTKKGRTVCGEHTDYGIIT 207 (320)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHH--HhhCCCcceeeeeecCCCC-CccccCcccccccCCCeEE
Confidence 457899999999999999999999999999999999998 6667778899999999954 3334678999999999999
Q ss_pred EEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeecccccccCCCCCceEEEEccCCCCCCeEec
Q 028407 89 LLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLGTGRERYSIAFFVEPSHDCLVEC 168 (209)
Q Consensus 89 ll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~~~~~~R~Si~~F~~p~~d~~i~p 168 (209)
+|+||.++||||++.+| +|++|+|.||++|||+||+||+||||+|+|++|||+.+..+|||++||++|+.|++|+|
T Consensus 208 lL~qd~~~GLqV~~~~g----~Wi~V~p~pg~lvVNvGD~l~~~TnG~~kSt~HRVv~~~~~R~Si~~F~~p~~d~~i~p 283 (320)
T PTZ00273 208 LLYQDSVGGLQVRNLSG----EWMDVPPLEGSFVVNIGDMMEMWSNGRYRSTPHRVVNTGVERYSMPFFCEPNPNVIIKC 283 (320)
T ss_pred EEecCCCCceEEECCCC----CEEeCCCCCCeEEEEHHHHHHHHHCCeeeCCCccccCCCCCeEEEEEEEcCCCCceEec
Confidence 99999999999997654 59999999999999999999999999999999999977789999999999999999999
Q ss_pred CCCCCCCCCCCCCCCccHHHHHHHHHHhhhccc
Q 028407 169 LPTCKSDKNPPKFPPIKCETYLSQRYKDTHADL 201 (209)
Q Consensus 169 ~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~~~ 201 (209)
+++++++++|++|+|++++||+..++.+.|...
T Consensus 284 l~~~~~~~~~~~y~~~~~~e~~~~~~~~~~~~~ 316 (320)
T PTZ00273 284 LDNCHSEENPPKYPPVRAVDWLLKRFAETYAYR 316 (320)
T ss_pred CccccCCCCcccCCceeHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988643
No 3
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=9e-52 Score=362.73 Aligned_cols=189 Identities=26% Similarity=0.424 Sum_probs=168.2
Q ss_pred ccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCcc---ccCCccceeeeccccCCCCCCCCCccccccc
Q 028407 5 FLCLCFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPE---MLGQAIATLRLLHYEGQISDPSKGMYGAGAH 81 (209)
Q Consensus 5 ~~~l~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~---~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~H 81 (209)
+.+-.+++||+.+++|+++|.+++.+|+++|+++||+++++|.... ...++.+.+|++|||| |++++ ..+|+++|
T Consensus 155 ~wP~~~~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~lRl~~YPp-~p~~~-~~~G~~~H 232 (358)
T PLN02254 155 LWPQDHTKFCDVMEEYQKEMKKLAERLMWLMLGSLGITEEDIKWAGPKSGSQGAQAALQLNSYPV-CPDPD-RAMGLAPH 232 (358)
T ss_pred hCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhhcccccCcceeEEEecCCC-CCCcc-cccCcCCc
Confidence 3455567899999999999999999999999999999988876211 1245668999999999 55553 56899999
Q ss_pred CCCCceeEEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCC
Q 028407 82 SDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEP 160 (209)
Q Consensus 82 tD~~~lTll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p 160 (209)
||+|+||||+||.++||||+.++ |+|++|+|.||++|||+||+||+||||+|||++|||+ +..++||||+||++|
T Consensus 233 tD~g~lTiL~Qd~v~GLQV~~~~----~~Wi~V~p~pgalVVNiGD~lq~~SNg~~kS~~HRVv~~~~~~R~Sia~F~~P 308 (358)
T PLN02254 233 TDSSLLTILYQSNTSGLQVFREG----VGWVTVPPVPGSLVVNVGDLLHILSNGRFPSVLHRAVVNKTRHRISVAYFYGP 308 (358)
T ss_pred cCCCcEEEEecCCCCCceEECCC----CEEEEcccCCCCEEEEhHHHHHHHhCCeeccccceeecCCCCCEEEEEEEecC
Confidence 99999999999999999999764 3599999999999999999999999999999999999 557899999999999
Q ss_pred CCCCeEecCCCCCCCCCCCCCCCccHHHHHHHHHHhhhc
Q 028407 161 SHDCLVECLPTCKSDKNPPKFPPIKCETYLSQRYKDTHA 199 (209)
Q Consensus 161 ~~d~~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~ 199 (209)
+.|++|+|+++++++++|++|++++++||+..+++....
T Consensus 309 ~~d~~i~pl~~lv~~~~p~~Y~~~t~~ey~~~~~~~~~~ 347 (358)
T PLN02254 309 PSDVQISPLPKLVDPNHPPLYRSVTWKEYLATKAKHFNK 347 (358)
T ss_pred CCCcEEeCcHHhcCCCCCcccCCcCHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999998876655
No 4
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.1e-51 Score=348.37 Aligned_cols=184 Identities=24% Similarity=0.400 Sum_probs=165.9
Q ss_pred cccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCCccceeeeccccCCCCCCCCCcccccccCCCC
Q 028407 6 LCLCFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYG 85 (209)
Q Consensus 6 ~~l~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~ 85 (209)
.+-.+|+||+.+.+|+++|.+++.+|+++++++||+++++|. ..+.+..+.+|++|||| +++++ ..+|+++|||+|
T Consensus 67 wP~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~lrl~~YP~-~~~~~-~~~g~~~HtD~g 142 (262)
T PLN03001 67 WPDFPPDYREVVGEYGDCMKALAQKLLAFISESLGLPCSCIE--DAVGDFYQNITVSYYPP-CPQPE-LTLGLQSHSDFG 142 (262)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhcCcchhheeecCCC-CCCcc-cccCCcCCcCCC
Confidence 343467899999999999999999999999999999999988 55666677899999999 44443 578999999999
Q ss_pred ceeEEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCCCC
Q 028407 86 LITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSHDC 164 (209)
Q Consensus 86 ~lTll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~d~ 164 (209)
+||||+||+++||||+.+ |+|++|+|.||++|||+||+|++||||+|+|++|||+ +...+||||+||+.|+.|+
T Consensus 143 ~lTlL~qd~v~GLqV~~~-----g~Wi~V~p~p~a~vVNiGD~l~~~tng~~~S~~HRVv~~~~~~R~Sia~F~~p~~d~ 217 (262)
T PLN03001 143 AITLLIQDDVEGLQLLKD-----AEWLMVPPISDAILIIIADQTEIITNGNYKSAQHRAIANANKARLSVATFHDPAKTA 217 (262)
T ss_pred eeEEEEeCCCCceEEeeC-----CeEEECCCCCCcEEEEccHHHHHHhCCccccccceEEcCCCCCEEEEEEEEcCCCCC
Confidence 999999999999999853 4699999999999999999999999999999999999 5578899999999999999
Q ss_pred eEecCCCCCCCCCCCCCCCccHHHHHHHHHHhhh
Q 028407 165 LVECLPTCKSDKNPPKFPPIKCETYLSQRYKDTH 198 (209)
Q Consensus 165 ~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~ 198 (209)
+|+|+++++++++|++|+|++++||+..++...-
T Consensus 218 ~i~p~~e~v~~~~p~~y~~~~~~e~l~~~~~~~~ 251 (262)
T PLN03001 218 KIAPASALSTESFPPRYCEIVYGEYVSSWYSKGP 251 (262)
T ss_pred EEeCChHhcCCCCCCcCCCccHHHHHHHHHHhcc
Confidence 9999999999999999999999999988877443
No 5
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=4.8e-51 Score=355.15 Aligned_cols=185 Identities=28% Similarity=0.464 Sum_probs=166.3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-CCCCCcccc--CCccceeeeccccCCCCCCCCCcccccccCCCCc
Q 028407 10 FHIFQVCLIYFVSAPREVAKAVARIIALALDLDA-DFFDKPEML--GQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGL 86 (209)
Q Consensus 10 ~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~-~~~~~~~~~--~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~ 86 (209)
+++||+.+.+|+++|.+++.+|+++||++||+++ ++|. ..+ ....+.+|++||||++..+++..+|+++|||+|+
T Consensus 130 p~~fr~~~~~Y~~~~~~L~~~ll~~la~~LGl~~~~~f~--~~~~~~~~~~~lRl~~YP~~~~~~~~~~~g~~~HTD~g~ 207 (335)
T PLN02156 130 PAIFREAVEEYMKEMKRMSSKVLEMVEEELKIEPKEKLS--KLVKVKESDSCLRMNHYPEKEETPEKVEIGFGEHTDPQL 207 (335)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCcHHHHH--HHhcCCCccceEeEEeCCCCCCCccccccCCCCccCCCc
Confidence 4689999999999999999999999999999974 6777 444 3446899999999954333345789999999999
Q ss_pred eeEEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCCCCe
Q 028407 87 ITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSHDCL 165 (209)
Q Consensus 87 lTll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~d~~ 165 (209)
||||+||+++||||+..+| +|++|+|.+|++|||+||+||+||||+|+|+.|||+ +.+.+||||+||+.|+.|++
T Consensus 208 lTlL~Qd~v~GLQV~~~~g----~Wi~Vpp~pga~VVNiGD~l~~wTNg~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~ 283 (335)
T PLN02156 208 ISLLRSNDTAGLQICVKDG----TWVDVPPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEK 283 (335)
T ss_pred eEEEEeCCCCceEEEeCCC----CEEEccCCCCcEEEEhHHHHHHHhCCeeeccceeeecCCCCCEEEEEEeecCCCCCE
Confidence 9999999999999986554 599999999999999999999999999999999999 55778999999999999999
Q ss_pred EecCCCCCCCCCCCCCCCccHHHHHHHHHHhhhcc
Q 028407 166 VECLPTCKSDKNPPKFPPIKCETYLSQRYKDTHAD 200 (209)
Q Consensus 166 i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~~ 200 (209)
|+|+++++++++|++|+|++++||+..++...+..
T Consensus 284 i~pl~~~v~~~~p~~y~p~~~~ey~~~~~~~~~~~ 318 (335)
T PLN02156 284 IAPLSCLVPKQDDCLYNEFTWSQYKLSAYKTKLGD 318 (335)
T ss_pred EeCChHhcCCCCCccCCCccHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999888764
No 6
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.7e-51 Score=357.74 Aligned_cols=186 Identities=31% Similarity=0.524 Sum_probs=169.4
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCCccceeeeccccCCCCCCCCCcccccccCCCCcee
Q 028407 9 CFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLIT 88 (209)
Q Consensus 9 ~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~lT 88 (209)
.+|+||+++.+|++.|.+++..|+++||++||+++++|+ ..+.+..+.+|++||||.+ .+ +..+|+++|||+|+||
T Consensus 147 ~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~lR~~~YPp~~-~~-~~~~g~~~HtD~g~lT 222 (345)
T PLN02750 147 NPSHFRELCQEYARQVEKLAFKLLELISLSLGLPADRLN--GYFKDQISFARFNHYPPCP-AP-HLALGVGRHKDGGALT 222 (345)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhcCcceEEEEEecCCCC-Cc-ccccCcCCCCCCCeEE
Confidence 346899999999999999999999999999999999998 6777778999999999943 33 3568999999999999
Q ss_pred EEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCCCCeEe
Q 028407 89 LLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSHDCLVE 167 (209)
Q Consensus 89 ll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~d~~i~ 167 (209)
||+||+++||||+... +|+|++|+|.+|++|||+||+||+||||+|+|++|||+ +.+.+|||++||+.|+.|++|+
T Consensus 223 lL~qd~v~GLQV~~~~---~g~Wi~V~p~pg~~vVNiGD~L~~~Tng~~~St~HRVv~~~~~~R~Si~~F~~P~~d~~i~ 299 (345)
T PLN02750 223 VLAQDDVGGLQISRRS---DGEWIPVKPIPDAFIINIGNCMQVWTNDLYWSAEHRVVVNSQKERFSIPFFFFPSHYVNIK 299 (345)
T ss_pred EEecCCCCceEEeecC---CCeEEEccCCCCeEEEEhHHHHHHHhCCeeecccceeccCCCCCEEEEEEeecCCCCCeec
Confidence 9999999999998631 25699999999999999999999999999999999999 5578999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCccHHHHHHHHHHhhhccc
Q 028407 168 CLPTCKSDKNPPKFPPIKCETYLSQRYKDTHADL 201 (209)
Q Consensus 168 p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~~~ 201 (209)
|+++++++++|++|+|++++||+..++...+...
T Consensus 300 pl~~~v~~~~p~~y~p~~~~e~~~~~~~~~~~~~ 333 (345)
T PLN02750 300 PLDELINEQNPPKYKEFNWGKFFASRNRSDYKKL 333 (345)
T ss_pred CcHHhcCCCCCCccCCccHHHHHHHHHhcccccc
Confidence 9999999999999999999999999999887643
No 7
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=4.9e-51 Score=355.96 Aligned_cols=185 Identities=28% Similarity=0.452 Sum_probs=167.0
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCCccceeeeccccCCCCCCCCCcccccccCCCCcee
Q 028407 9 CFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLIT 88 (209)
Q Consensus 9 ~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~lT 88 (209)
..|+||+.+++|+++|.+++..|+++||++||+++++|+ ..+....+.+|++||||. +++ +..+|+++|||+|+||
T Consensus 144 ~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~lrl~~YP~~-~~~-~~~~g~~~HTD~g~lT 219 (337)
T PLN02639 144 NPPSFKEIVSTYCREVRELGFRLQEAISESLGLEKDYIK--NVLGEQGQHMAVNYYPPC-PEP-ELTYGLPAHTDPNALT 219 (337)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhCCCccEEEEEcCCCC-CCc-ccccCCCCCcCCCceE
Confidence 356899999999999999999999999999999999998 566667789999999994 443 3568999999999999
Q ss_pred EEeec-CCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCCCCeE
Q 028407 89 LLATD-EVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSHDCLV 166 (209)
Q Consensus 89 ll~~d-~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~d~~i 166 (209)
||+|| .++||||+. + |+|++|+|.||++|||+||+||+||||+|+|++|||+ ++..+|||++||++|+.|++|
T Consensus 220 lL~qd~~v~GLQV~~-~----g~Wi~V~p~pg~lVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i 294 (337)
T PLN02639 220 ILLQDQQVAGLQVLK-D----GKWVAVNPHPGAFVINIGDQLQALSNGRYKSVWHRAVVNTDKERMSVASFLCPCDDAVI 294 (337)
T ss_pred EEEecCCcCceEeec-C----CeEEeccCCCCeEEEechhHHHHHhCCeeeccCcccccCCCCCEEEEEEEecCCCCceE
Confidence 99998 499999984 3 4699999999999999999999999999999999998 557889999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCccHHHHHHHHHHhhhcccc
Q 028407 167 ECLPTCKSDKNPPKFPPIKCETYLSQRYKDTHADLN 202 (209)
Q Consensus 167 ~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~~~~ 202 (209)
+|+++++++++|++|+|++++||+..++.+.....+
T Consensus 295 ~pl~~~~~~~~p~~y~p~~~~e~~~~~~~~~~~~~~ 330 (337)
T PLN02639 295 SPAKKLTDDGTAAVYRDFTYAEYYKKFWSRNLDQEH 330 (337)
T ss_pred eCchHHcCCCCCCCCCCCCHHHHHHHHHhccCCCch
Confidence 999999999999999999999999999886665433
No 8
>PLN02904 oxidoreductase
Probab=100.00 E-value=5.5e-51 Score=357.77 Aligned_cols=186 Identities=23% Similarity=0.341 Sum_probs=168.1
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCCccceeeeccccCCCCCCCCCcccccccCCCCc
Q 028407 7 CLCFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGL 86 (209)
Q Consensus 7 ~l~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~ 86 (209)
+-..|+||+.+.+|+++|.+++..|+++||++||+++++|. ..+....+.+|++|||| |+.++ ..+|+++|||+|+
T Consensus 160 P~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~lrl~~YPp-~p~~~-~~~g~~~HtD~g~ 235 (357)
T PLN02904 160 PSNPPCYKEKVGKYAEATHVLHKQLIEAISESLGLEKNYLQ--EEIEEGSQVMAVNCYPA-CPEPE-IALGMPPHSDFGS 235 (357)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhcCcccEEEeeecCC-CCCcc-cccCCcCccCCCc
Confidence 33458899999999999999999999999999999999998 56666778999999999 44443 5789999999999
Q ss_pred eeEEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCCCCe
Q 028407 87 ITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSHDCL 165 (209)
Q Consensus 87 lTll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~d~~ 165 (209)
||||+|+. +||||+.++| +|++|+|.||++|||+||+||+||||+|||++|||+ +...+||||+||+.|+.|++
T Consensus 236 lTlL~qd~-~GLQV~~~~g----~Wi~V~p~pgalVVNiGD~Le~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~ 310 (357)
T PLN02904 236 LTILLQSS-QGLQIMDCNK----NWVCVPYIEGALIVQLGDQVEVMSNGIYKSVVHRVTVNKDYKRLSFASLHSLPLHKK 310 (357)
T ss_pred eEEEecCC-CeeeEEeCCC----CEEECCCCCCeEEEEccHHHHHHhCCeeeccCCcccCCCCCCEEEEEEeecCCCCCe
Confidence 99999985 8999998754 599999999999999999999999999999999999 55789999999999999999
Q ss_pred EecCCCCCCCCCCCCCCCccHHHHHHHHHHhhhccc
Q 028407 166 VECLPTCKSDKNPPKFPPIKCETYLSQRYKDTHADL 201 (209)
Q Consensus 166 i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~~~ 201 (209)
|+|+++++++++|++|+|++++||+..++++.....
T Consensus 311 i~Pl~~~v~~~~p~~Y~~~~~~ey~~~~~~~~~~~~ 346 (357)
T PLN02904 311 ISPAPELVNENKPAAYGEFSFNDFLDYISSNDITQE 346 (357)
T ss_pred EeCCHHHcCCCCCCcCCCCCHHHHHHHHHhcccCcc
Confidence 999999999999999999999999999888665433
No 9
>PLN02216 protein SRG1
Probab=100.00 E-value=4.9e-51 Score=358.22 Aligned_cols=186 Identities=24% Similarity=0.355 Sum_probs=167.0
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCC-ccceeeeccccCCCCCCCCCcccccccCCCCce
Q 028407 9 CFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQ-AIATLRLLHYEGQISDPSKGMYGAGAHSDYGLI 87 (209)
Q Consensus 9 ~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~-~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~l 87 (209)
.+++||+.+.+|+++|.+++..|+++||++||+++++|. ..+.. ..+.+|++|||| |++++ ..+|+++|||+|+|
T Consensus 163 ~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~~lRl~~YPp-~p~~~-~~~G~~~HtD~g~l 238 (357)
T PLN02216 163 LPLPFRDTLETYSAEVKSIAKILFAKMASALEIKPEEME--KLFDDDLGQSIRMNYYPP-CPQPD-QVIGLTPHSDAVGL 238 (357)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhccCchheeEEeecCC-CCCcc-cccCccCcccCceE
Confidence 456899999999999999999999999999999999987 55554 457899999999 44543 56899999999999
Q ss_pred eEEee-cCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCCCCe
Q 028407 88 TLLAT-DEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSHDCL 165 (209)
Q Consensus 88 Tll~~-d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~d~~ 165 (209)
|||+| ++++||||+. + |+|++|+|.||++|||+||+||+||||+|||++|||+ ++.++|||++||+.|+.|++
T Consensus 239 TlL~q~~~v~GLQV~~-~----g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~ 313 (357)
T PLN02216 239 TILLQVNEVEGLQIKK-D----GKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKE 313 (357)
T ss_pred EEEEecCCCCceeEEE-C----CEEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCCCCe
Confidence 99999 5799999984 3 4699999999999999999999999999999999998 55789999999999999999
Q ss_pred EecCCCCCCCCCCCCCCCccHHHHHHHHHHhhhccccc
Q 028407 166 VECLPTCKSDKNPPKFPPIKCETYLSQRYKDTHADLNM 203 (209)
Q Consensus 166 i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~~~~~ 203 (209)
|+|+++++++++|++|++++++||+..++.+.+..+..
T Consensus 314 i~p~~~lv~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~ 351 (357)
T PLN02216 314 IGPAKSLVERQKAALFKSLTTKEYFDGLFSRELDGKAY 351 (357)
T ss_pred EeCcHHHcCCCCCCCCCCcCHHHHHHHHHhcccCCcch
Confidence 99999999999999999999999999999877654443
No 10
>PLN02997 flavonol synthase
Probab=100.00 E-value=1.1e-50 Score=351.97 Aligned_cols=183 Identities=32% Similarity=0.478 Sum_probs=164.0
Q ss_pred ccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCC--ccceeeeccccCCCCCCCCCcccccccC
Q 028407 5 FLCLCFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQ--AIATLRLLHYEGQISDPSKGMYGAGAHS 82 (209)
Q Consensus 5 ~~~l~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~--~~~~~rl~~Yp~~~~~~~~~~~g~~~Ht 82 (209)
+.+-.+|+||+++++|+..|.+++..|+++|+++||+++++|. ..+.. ..+.+|++||||. +.+ +..+|+++||
T Consensus 131 ~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ia~~Lgl~~~~f~--~~~~~~~~~~~lRl~~YP~~-~~~-~~~~g~~~HT 206 (325)
T PLN02997 131 YWPKNPPQYREVTEEYTKHMKRLTEKILGWLSEGLGLPRETFT--QSIGGETAEYVLRVNFYPPT-QDT-ELVIGAAAHS 206 (325)
T ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhcCCcccceeeeecCCCC-CCc-ccccCccCcc
Confidence 3444568999999999999999999999999999999999888 44442 3468999999994 333 3568999999
Q ss_pred CCCceeEEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCC
Q 028407 83 DYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPS 161 (209)
Q Consensus 83 D~~~lTll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~ 161 (209)
|+|+||||+||+++||||+.+ |+|++|+|.+|++|||+||+||+||||+|+|++|||+ +....|||++||+.|+
T Consensus 207 D~g~lTlL~Qd~v~GLQV~~~-----g~Wi~V~p~pgalvVNiGD~Le~~TNG~~kSt~HRVv~~~~~~R~Si~fF~~P~ 281 (325)
T PLN02997 207 DMGAIALLIPNEVPGLQAFKD-----EQWLDLNYINSAVVVIIGDQLMRMTNGRFKNVLHRAKTDKERLRISWPVFVAPR 281 (325)
T ss_pred CCCceEEEecCCCCCEEEeEC-----CcEEECCCCCCeEEEEechHHHHHhCCccccccceeeCCCCCCEEEEEEEecCC
Confidence 999999999999999999953 4699999999999999999999999999999999999 4567899999999999
Q ss_pred CCCeEecCCCCCCCCCCCCCCCccHHHHHHHHHHh
Q 028407 162 HDCLVECLPTCKSDKNPPKFPPIKCETYLSQRYKD 196 (209)
Q Consensus 162 ~d~~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~ 196 (209)
.|++|+|+++++++++|++|+|++++||+..++++
T Consensus 282 ~d~~i~Plp~~v~~~~p~~y~~~~~~e~l~~r~~~ 316 (325)
T PLN02997 282 ADMSVGPLPELTGDENPPKFETLIYNDYIDQKIRG 316 (325)
T ss_pred CCCeEeCChHHcCCCCCCcCCCccHHHHHHHHHhh
Confidence 99999999999999999999999999999998773
No 11
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1e-50 Score=356.68 Aligned_cols=186 Identities=30% Similarity=0.457 Sum_probs=168.5
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCCccceeeeccccCCCCCCCCCcccccccCCCCc
Q 028407 7 CLCFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGL 86 (209)
Q Consensus 7 ~l~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~ 86 (209)
+-..|+||+.+++|+++|.+++..|+++|+++||+++++|. ..+....+.+|++|||+ |+.++ ..+|+++|||+|+
T Consensus 163 P~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~lR~~~YP~-~~~~~-~~~g~~~HtD~g~ 238 (361)
T PLN02758 163 PTKPARFSETLEVYSREIRELCQRLLKYIAMTLGLKEDRFE--EMFGEAVQAVRMNYYPP-CSRPD-LVLGLSPHSDGSA 238 (361)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhH--HHhcCccceeeeecCCC-CCCcc-cccCccCccCCce
Confidence 33456899999999999999999999999999999999998 66667788999999999 44543 5789999999999
Q ss_pred eeEEeecC--CCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCCC
Q 028407 87 ITLLATDE--VAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSHD 163 (209)
Q Consensus 87 lTll~~d~--~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~d 163 (209)
||||+||+ ++||||+++ |+|++|+|.||++|||+||+||+||||+|||+.|||+ +.+++|||++||++|+.|
T Consensus 239 lTlL~qd~~~v~GLQV~~~-----g~Wi~V~p~pgalVVNiGD~L~~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d 313 (361)
T PLN02758 239 LTVLQQGKGSCVGLQILKD-----NTWVPVHPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKEKDRLSIVTFYAPSYE 313 (361)
T ss_pred eEEEEeCCCCCCCeeeeeC-----CEEEeCCCCCCeEEEEccchhhhhcCCeeecccceeecCCCCCEEEEEEEecCCCC
Confidence 99999984 789999864 4699999999999999999999999999999999999 557889999999999999
Q ss_pred CeEecCCCCCCCCCCCCCCCccHHHHHHHHHHhhhccc
Q 028407 164 CLVECLPTCKSDKNPPKFPPIKCETYLSQRYKDTHADL 201 (209)
Q Consensus 164 ~~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~~~ 201 (209)
++|+|+++++++++|++|++++++||+..+++..+...
T Consensus 314 ~~i~pl~elv~~~~p~~Y~~~~~~ey~~~~~~~~~~~~ 351 (361)
T PLN02758 314 VELGPMPELVDDENPCKYRRYNHGEYSRHYVTSKLQGK 351 (361)
T ss_pred CeEeCCHHHcCCCCCCcCCCccHHHHHHHHHhcccCch
Confidence 99999999999999999999999999999998776543
No 12
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.1e-50 Score=354.90 Aligned_cols=185 Identities=29% Similarity=0.428 Sum_probs=166.6
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCCccceeeeccccCCCCCCCCCcccccccCCCCcee
Q 028407 9 CFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLIT 88 (209)
Q Consensus 9 ~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~lT 88 (209)
.+++||+.+.+|+++|.+++..|+++||++||+++++|+ ..+....+.+|++|||| ++.++ ..+|+++|||+|+||
T Consensus 151 ~~~~fr~~~~~y~~~~~~l~~~il~~la~~Lgl~~~~f~--~~~~~~~~~lrl~~YPp-~~~~~-~~~G~~~HtD~g~lT 226 (348)
T PLN02912 151 TPISFREVTAEYATSVRALVLTLLEAISESLGLEKDRVS--NTLGKHGQHMAINYYPP-CPQPE-LTYGLPGHKDANLIT 226 (348)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhcCccceeeeeecCC-CCChh-hcCCcCCCcCCCceE
Confidence 356899999999999999999999999999999999988 66666778999999999 44443 468999999999999
Q ss_pred EEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCCCCeEe
Q 028407 89 LLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSHDCLVE 167 (209)
Q Consensus 89 ll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~d~~i~ 167 (209)
||+||+++||||+. + |+|++|+|.+|++|||+||+|++||||+|+|++|||+ ++..+|||++||++|+.|+.|+
T Consensus 227 lL~Qd~v~GLQV~~-~----g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~ 301 (348)
T PLN02912 227 VLLQDEVSGLQVFK-D----GKWIAVNPIPNTFIVNLGDQMQVISNDKYKSVLHRAVVNTDKERISIPTFYCPSEDAVIG 301 (348)
T ss_pred EEEECCCCceEEEE-C----CcEEECCCcCCeEEEEcCHHHHHHhCCEEEcccccccCCCCCCEEEEEEEecCCCCCeEe
Confidence 99999999999984 3 4699999999999999999999999999999999998 5578899999999999999999
Q ss_pred cCCCCCCCC--CCCCCCCccHHHHHHHHHHhhhcccc
Q 028407 168 CLPTCKSDK--NPPKFPPIKCETYLSQRYKDTHADLN 202 (209)
Q Consensus 168 p~~~~~~~~--~p~~y~~~t~~e~~~~~~~~~~~~~~ 202 (209)
|++++++++ +|++|++++++||+..++.+.+...+
T Consensus 302 pl~~~v~~~~~~p~~y~~~~~~ey~~~~~~~~~~~~~ 338 (348)
T PLN02912 302 PAQELINEEEDSLAIYRNFTYAEYFEKFWDTAFATES 338 (348)
T ss_pred CCHHHhCcCCCCCCCCCCCcHHHHHHHHHhcccCCcc
Confidence 999998765 48999999999999999987775433
No 13
>PLN02704 flavonol synthase
Probab=100.00 E-value=1.2e-50 Score=353.24 Aligned_cols=183 Identities=30% Similarity=0.443 Sum_probs=164.5
Q ss_pred cccccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCC--ccceeeeccccCCCCCCCCCccccccc
Q 028407 4 IFLCLCFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQ--AIATLRLLHYEGQISDPSKGMYGAGAH 81 (209)
Q Consensus 4 ~~~~l~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~--~~~~~rl~~Yp~~~~~~~~~~~g~~~H 81 (209)
|+.+-.+|+||+.+.+|+++|.+++..|+++|+++||+++++|. ..+.. ..+.+|++|||| ++.+ +..+|+++|
T Consensus 146 n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~~~lrl~~YP~-~~~~-~~~~g~~~H 221 (335)
T PLN02704 146 QFWPKNPPSYREVNEEYAKYLRGVADKLFKTLSLGLGLEEDELK--EAVGGEELEYLLKINYYPP-CPRP-DLALGVVAH 221 (335)
T ss_pred hhCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhcCCchhhhhhhhcCCC-CCCc-ccccCccCc
Confidence 34555568999999999999999999999999999999999887 44432 346899999999 4444 356899999
Q ss_pred CCCCceeEEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCC
Q 028407 82 SDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEP 160 (209)
Q Consensus 82 tD~~~lTll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p 160 (209)
||+|+||||+||+++||||+. + |+|++|+|.+|++|||+||+||+||||+|||++|||+ ++..+||||+||++|
T Consensus 222 tD~g~lTlL~qd~v~GLQV~~-~----g~Wi~V~p~pg~lvVNvGD~L~~~TNg~~kSt~HRVv~~~~~~R~Si~~F~~p 296 (335)
T PLN02704 222 TDMSAITILVPNEVQGLQVFR-D----DHWFDVKYIPNALVIHIGDQIEILSNGKYKSVLHRTTVNKEKTRMSWPVFLEP 296 (335)
T ss_pred cCCcceEEEecCCCCceeEeE-C----CEEEeCCCCCCeEEEEechHHHHHhCCeeecccceeecCCCCCeEEEEEEecC
Confidence 999999999999999999984 3 4699999999999999999999999999999999999 557899999999999
Q ss_pred CCCCeEecCCCCCCCCCCCCCCCccHHHHHHHHHH
Q 028407 161 SHDCLVECLPTCKSDKNPPKFPPIKCETYLSQRYK 195 (209)
Q Consensus 161 ~~d~~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~ 195 (209)
+.|++|+|+++++++++|++|++++++||+..++.
T Consensus 297 ~~d~~i~pl~~~~~~~~p~~Y~~~~~~e~~~~~~~ 331 (335)
T PLN02704 297 PSELAVGPLPKLINEDNPPKFKTKKFKDYVYCKLN 331 (335)
T ss_pred CCCceEeCChHhcCCCCCccCCCCCHHHHHHHHHh
Confidence 99999999999999999999999999999998876
No 14
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=3.1e-50 Score=352.98 Aligned_cols=183 Identities=26% Similarity=0.346 Sum_probs=165.0
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCCccceeeeccccCCCCCCCCCcccccccCCCCcee
Q 028407 9 CFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLIT 88 (209)
Q Consensus 9 ~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~lT 88 (209)
..|+||+.+++|+++|.+++..|+++++++||+++++|. ..+....+.+|++|||+ ++.+ +..+|+++|||+|+||
T Consensus 149 ~~~~fr~~~~~y~~~~~~L~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~lrl~~YP~-~~~~-~~~~G~~~HTD~g~lT 224 (358)
T PLN02515 149 KPEGWRAVTEEYSEKLMGLACKLLEVLSEAMGLEKEALT--KACVDMDQKVVVNYYPK-CPQP-DLTLGLKRHTDPGTIT 224 (358)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHH--HhhcCccceEEEeecCC-CCCh-hhccCCCCCCCCCeEE
Confidence 357899999999999999999999999999999999988 56666678899999999 4444 3578999999999999
Q ss_pred EEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCCCCeEe
Q 028407 89 LLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSHDCLVE 167 (209)
Q Consensus 89 ll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~d~~i~ 167 (209)
||+||+++||||++++| |+|++|+|.||++|||+||+||+||||+|||++|||+ ++..+||||+||+.|+.|++|+
T Consensus 225 lL~Qd~v~GLQV~~~~~---~~Wi~Vpp~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~i~ 301 (358)
T PLN02515 225 LLLQDQVGGLQATRDGG---KTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNCSRLSIATFQNPAPDATVY 301 (358)
T ss_pred EEecCCCCceEEEECCC---CeEEECCCCCCeEEEEccHHHHHHhCCeeeeecceEECCCCCCEEEEEEEecCCCCCEEE
Confidence 99999999999987643 3699999999999999999999999999999999998 5578999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCccHHHHHHHHHHhhhc
Q 028407 168 CLPTCKSDKNPPKFPPIKCETYLSQRYKDTHA 199 (209)
Q Consensus 168 p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~ 199 (209)
|++ ++.+++|++|++++++||+..++.+.+.
T Consensus 302 Pl~-~~~~~~p~~y~~~t~~eyl~~~~~~~~~ 332 (358)
T PLN02515 302 PLK-VREGEKPILEEPITFAEMYRRKMSRDLE 332 (358)
T ss_pred CCC-cCCCCCCCcCCCcCHHHHHHHHHhcccc
Confidence 997 5666789999999999999999887765
No 15
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=2.5e-50 Score=346.54 Aligned_cols=183 Identities=28% Similarity=0.422 Sum_probs=164.2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CCCCCCCccccCCccceeeeccccCCCCCCCCCcccccccCCCCcee
Q 028407 10 FHIFQVCLIYFVSAPREVAKAVARIIALALDL-DADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLIT 88 (209)
Q Consensus 10 ~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl-~~~~~~~~~~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~lT 88 (209)
.|+||+.+.+|+++|.+++..|+++|+++||+ ++++|+ .. .+.+|++||||. +.+ +...|+++|||+|+||
T Consensus 107 ~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~f~--~~----~~~lr~~~YP~~-p~~-~~~~g~~~HtD~g~lT 178 (300)
T PLN02365 107 SPHQRETIKKYAKAIHDLAMDLARKLAESLGLVEGDFFQ--GW----PSQFRINKYNFT-PET-VGSSGVQIHTDSGFLT 178 (300)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHh--hc----ccceeeeecCCC-CCc-cccccccCccCCCceE
Confidence 46899999999999999999999999999999 777887 32 478999999984 333 3568999999999999
Q ss_pred EEeecC-CCceeEEec-CCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCCCCe
Q 028407 89 LLATDE-VAGLQICKD-RDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSHDCL 165 (209)
Q Consensus 89 ll~~d~-~~GLqV~~~-~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~d~~ 165 (209)
||+||+ ++||||+++ + |+|++|+|.||++|||+||+||+||||+|+|++|||+ +...+||||+||+.|+.|++
T Consensus 179 lL~qd~~~~GLqV~~~~~----g~Wi~V~p~pga~vVNiGD~l~~~TNG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~ 254 (300)
T PLN02365 179 ILQDDENVGGLEVMDPSS----GEFVPVDPLPGTLLVNLGDVATAWSNGRLCNVKHRVQCKEATMRISIASFLLGPKDDD 254 (300)
T ss_pred EEecCCCcCceEEEECCC----CeEEecCCCCCeEEEEhhHHHHHHhCCceecccceeEcCCCCCEEEEEEEecCCCCCe
Confidence 999984 899999986 4 4699999999999999999999999999999999999 45678999999999999999
Q ss_pred EecCCCCCCCCCCCCCCCccHHHHHHHHHHhhhcccccc
Q 028407 166 VECLPTCKSDKNPPKFPPIKCETYLSQRYKDTHADLNMY 204 (209)
Q Consensus 166 i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~~~~~~ 204 (209)
|+|+++++++++|++|++++++||+..++.+.+.....+
T Consensus 255 i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~~~~~~ 293 (300)
T PLN02365 255 VEAPPEFVDAEHPRLYKPFTYEDYRKLRLSTKLHAGEAL 293 (300)
T ss_pred EeCCHHHcCCCCCccCCCccHHHHHHHHHhccccccchH
Confidence 999999999999999999999999999988777654433
No 16
>PLN02485 oxidoreductase
Probab=100.00 E-value=5.1e-50 Score=348.67 Aligned_cols=189 Identities=32% Similarity=0.535 Sum_probs=166.3
Q ss_pred cccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCCccceeeeccccCCCCC--CCCCcccccccCC
Q 028407 6 LCLCFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISD--PSKGMYGAGAHSD 83 (209)
Q Consensus 6 ~~l~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~rl~~Yp~~~~~--~~~~~~g~~~HtD 83 (209)
.+-..|+||+.+.+|+++|.+++..|++++|++||+++++|.+ ....++.+.+|++||||.+.. ..+..+|+++|||
T Consensus 134 wP~~~~~fr~~~~~y~~~~~~l~~~ll~~~a~~Lgl~~~~f~~-~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD 212 (329)
T PLN02485 134 WPENPQEFKALMEEYIKLCTDLSRKILRGIALALGGSPDEFEG-KMAGDPFWVMRIIGYPGVSNLNGPPENDIGCGAHTD 212 (329)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhh-hhccCccceEEEEeCCCCccccCCcccCcccccccC
Confidence 3444578999999999999999999999999999999988862 223456788999999995431 1235789999999
Q ss_pred CCceeEEeec-CCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCC
Q 028407 84 YGLITLLATD-EVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPS 161 (209)
Q Consensus 84 ~~~lTll~~d-~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~ 161 (209)
+|+||||+|| .++||||+..+| +|++|+|.+|++|||+||+|++||||+|+|++|||+ ++..+|||++||++|+
T Consensus 213 ~g~lTlL~qd~~~~GLqV~~~~g----~Wi~V~p~pg~~vVNiGD~L~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~ 288 (329)
T PLN02485 213 YGLLTLVNQDDDITALQVRNLSG----EWIWAIPIPGTFVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFFYETN 288 (329)
T ss_pred CCeEEEEeccCCCCeeeEEcCCC----cEEECCCCCCcEEEEhHHHHHHHHCCEeeCCCceecCCCCCCeEEEEEEecCC
Confidence 9999999997 589999997654 599999999999999999999999999999999999 5578899999999999
Q ss_pred CCCeEecCCCCCC--CCCCCCCCCccHHHHHHHHHHhhhc
Q 028407 162 HDCLVECLPTCKS--DKNPPKFPPIKCETYLSQRYKDTHA 199 (209)
Q Consensus 162 ~d~~i~p~~~~~~--~~~p~~y~~~t~~e~~~~~~~~~~~ 199 (209)
.|++|+|++++++ +++|++|++++++||+..++.+.|.
T Consensus 289 ~d~~i~pl~~~~~~~~~~~~~y~~~t~~e~~~~~~~~~~~ 328 (329)
T PLN02485 289 FDAAVEPLDICKEKRTGGSQVFKRVVYGEHLVNKVLTNFA 328 (329)
T ss_pred CCceeecchhhcccccCCCCCCCcEeHHHHHHHHHHHhhc
Confidence 9999999999987 6788999999999999999998873
No 17
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=4.6e-50 Score=352.64 Aligned_cols=180 Identities=28% Similarity=0.488 Sum_probs=164.4
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCCccceeeeccccCCCCCCCCCcccccccCCCCceeE
Q 028407 10 FHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLITL 89 (209)
Q Consensus 10 ~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~lTl 89 (209)
+++||+.+++|+.+|.+++..||++||++||+++++|+ ..+..+.+.+|++|||| ++.+ +..+|+++|||+|+|||
T Consensus 161 ~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~lrl~~YP~-~~~~-~~~~g~~~HTD~g~lTl 236 (361)
T PLN02276 161 FEQFGKVYQEYCEAMKTLSLKIMELLGISLGVDRGYYR--KFFEDGDSIMRCNYYPP-CQEP-ELTLGTGPHCDPTSLTI 236 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhcCccceeeeEeCCC-CCCc-ccccCCccccCCceeEE
Confidence 35799999999999999999999999999999999998 66677788999999999 4444 35689999999999999
Q ss_pred EeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCCCCeEec
Q 028407 90 LATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSHDCLVEC 168 (209)
Q Consensus 90 l~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~d~~i~p 168 (209)
|+||.++||||+. + |+|++|+|.+|++|||+||+|++||||+|+|++|||+ ++..+|||++||+.|+.|++|.|
T Consensus 237 L~Qd~v~GLQV~~-~----g~Wi~V~p~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~P~~d~~i~p 311 (361)
T PLN02276 237 LHQDQVGGLQVFV-D----NKWRSVRPRPGALVVNIGDTFMALSNGRYKSCLHRAVVNSERERRSLAFFLCPKEDKVVRP 311 (361)
T ss_pred EEecCCCceEEEE-C----CEEEEcCCCCCeEEEEcHHHHHHHhCCccccccceeecCCCCCEEEEEEEecCCCCCEEeC
Confidence 9999999999994 3 4699999999999999999999999999999999998 55789999999999999999999
Q ss_pred CCCCCCCCCCCCCCCccHHHHHHHHHHhhh
Q 028407 169 LPTCKSDKNPPKFPPIKCETYLSQRYKDTH 198 (209)
Q Consensus 169 ~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~ 198 (209)
+++++++++|++|++++++||++.+.+...
T Consensus 312 l~~~v~~~~p~~y~~~~~~ey~~~~~~~~~ 341 (361)
T PLN02276 312 PQELVDREGPRKYPDFTWSDLLEFTQKHYR 341 (361)
T ss_pred ChHhcCCCCCCcCCCCCHHHHHHHHHHhcc
Confidence 999999999999999999999987775443
No 18
>PLN02947 oxidoreductase
Probab=100.00 E-value=2.7e-50 Score=355.10 Aligned_cols=184 Identities=27% Similarity=0.391 Sum_probs=164.5
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC---CCCCccccCCccceeeeccccCCCCCCCCCcccccccCCCC
Q 028407 9 CFHIFQVCLIYFVSAPREVAKAVARIIALALDLDAD---FFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYG 85 (209)
Q Consensus 9 ~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~---~~~~~~~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~ 85 (209)
.+++||+.+++|+++|.+++..|+++||++||++++ +|. ..+....+.+|++|||| |++++ ..+|+++|||+|
T Consensus 176 ~~~~fr~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~--~~~~~~~~~lrln~YPp-~p~~~-~~~G~~~HTD~g 251 (374)
T PLN02947 176 SPADLRKVAATYAKATKRLFLELMEAILESLGIVKRGSDELL--EEFEAGSQMMVVNCYPA-CPEPE-LTLGMPPHSDYG 251 (374)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccchHHHH--HHhcCcceeeeeecCCC-CCCcc-cccCCCCccCCC
Confidence 356899999999999999999999999999999743 444 34456678999999999 55553 568999999999
Q ss_pred ceeEEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCCCC
Q 028407 86 LITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSHDC 164 (209)
Q Consensus 86 ~lTll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~d~ 164 (209)
+||||+||+++||||+. + |+|++|+|.||++|||+||+||+||||+|||++|||+ ++..+||||+||+.|+.|+
T Consensus 252 ~lTlL~Qd~v~GLQV~~-~----g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~ 326 (374)
T PLN02947 252 FLTLLLQDEVEGLQIMH-A----GRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLPFER 326 (374)
T ss_pred ceEEEEecCCCCeeEeE-C----CEEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEEEEEecCCCCC
Confidence 99999999999999997 3 4699999999999999999999999999999999998 5578999999999999999
Q ss_pred eEecCCCCCCCCCCCCCCCccHHHHHHHHHHhhhccc
Q 028407 165 LVECLPTCKSDKNPPKFPPIKCETYLSQRYKDTHADL 201 (209)
Q Consensus 165 ~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~~~ 201 (209)
+|.|+++++++++|++|++++++||+....+..-+..
T Consensus 327 ~i~Pl~~lv~~~~p~~Y~~~~~~ey~~~~~~~~~~~~ 363 (374)
T PLN02947 327 VVGPAPELVDEQNPRRYMDTDFATFLAYLASAEGKHK 363 (374)
T ss_pred EEeCChHhcCCCCCCcCCCCCHHHHHHHHHHhccCch
Confidence 9999999999999999999999999998876555433
No 19
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=3e-50 Score=353.77 Aligned_cols=187 Identities=27% Similarity=0.416 Sum_probs=166.3
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccC---CccceeeeccccCCCCCCCCCcccccccCC
Q 028407 7 CLCFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLG---QAIATLRLLHYEGQISDPSKGMYGAGAHSD 83 (209)
Q Consensus 7 ~l~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~---~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD 83 (209)
+-..|+||+.+++|+++|.+++..|+++||++||+++++|. ..+. ...+.+|++|||+ ++.++ ..+|+++|||
T Consensus 160 P~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~~~~lrl~~YP~-~~~~~-~~~g~~~HTD 235 (360)
T PLN03178 160 PKTPPDYVPATSEYSRSLRSLATKLLAILSLGLGLPEDRLE--KEVGGLEELLLQMKINYYPR-CPQPD-LALGVEAHTD 235 (360)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhcCcccchhhhheeccCC-CCCCc-cccCcCCccC
Confidence 33467899999999999999999999999999999999988 5554 3457899999999 44443 5789999999
Q ss_pred CCceeEEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCC
Q 028407 84 YGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSH 162 (209)
Q Consensus 84 ~~~lTll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~ 162 (209)
+|+||||+||.++||||+.+ |+|++|+|.+|++|||+||+||+||||+|||++|||+ +++.+||||+||++|+.
T Consensus 236 ~g~lTlL~qd~v~GLQV~~~-----g~Wi~V~p~pg~lvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~ 310 (360)
T PLN03178 236 VSALTFILHNMVPGLQVLYE-----GKWVTAKCVPDSIVVHIGDTLEILSNGRYKSILHRGLVNKEKVRISWAVFCEPPK 310 (360)
T ss_pred CCceEEEeeCCCCceeEeEC-----CEEEEcCCCCCeEEEEccHHHHHHhCCccccccceeecCCCCCeEEEEEEecCCc
Confidence 99999999999999999853 4699999999999999999999999999999999998 56778999999999999
Q ss_pred CCe-EecCCCCCCCCCCCCCCCccHHHHHHHHHHhhhcccc
Q 028407 163 DCL-VECLPTCKSDKNPPKFPPIKCETYLSQRYKDTHADLN 202 (209)
Q Consensus 163 d~~-i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~~~~ 202 (209)
|++ +.|+++++++++|++|+|++++||+..++...+...+
T Consensus 311 d~~v~~pl~~~v~~~~p~~y~p~~~~eyl~~~~~~~~~~~~ 351 (360)
T PLN03178 311 EKIILKPLPELVSKEEPPKFPPRTFGQHVSHKLFKKPQDER 351 (360)
T ss_pred ccccccCcHHHcCCCCcccCCCccHHHHHHHHHhcccCcch
Confidence 965 5999999998899999999999999999987775443
No 20
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=3.4e-49 Score=347.24 Aligned_cols=184 Identities=29% Similarity=0.454 Sum_probs=162.8
Q ss_pred cccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCC---ccceeeeccccCCCCCCCCCcccccccC
Q 028407 6 LCLCFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQ---AIATLRLLHYEGQISDPSKGMYGAGAHS 82 (209)
Q Consensus 6 ~~l~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~---~~~~~rl~~Yp~~~~~~~~~~~g~~~Ht 82 (209)
.+-.+|+||+.+.+|+++|.+++..|++++|++||+++++|. ..+.. ..+.+|++|||+. +++ +..+|+++||
T Consensus 161 wP~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~--~~~~~~~~~~~~lRl~~YP~~-p~~-~~~~g~~~Ht 236 (362)
T PLN02393 161 WPSLPPSCRELIEEYGEEVVKLCGRLMKVLSVNLGLEEDRLQ--NAFGGEDGVGACLRVNYYPKC-PQP-DLTLGLSPHS 236 (362)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhCCCccccceeeeeecCCC-CCc-cccccccccc
Confidence 344567899999999999999999999999999999999887 44433 2379999999984 444 3468999999
Q ss_pred CCCceeEEeec-CCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCC
Q 028407 83 DYGLITLLATD-EVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEP 160 (209)
Q Consensus 83 D~~~lTll~~d-~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p 160 (209)
|+|+||||+|+ +++||||+. + |+|++|+|.||++|||+||+||+||||+|+|++|||+ +...+||||+||+.|
T Consensus 237 D~g~lTlL~q~~~v~GLQV~~-~----g~W~~V~p~pgalVVNiGD~l~~~Tng~~kSt~HRVv~~~~~~R~SiafF~~P 311 (362)
T PLN02393 237 DPGGMTILLPDDNVAGLQVRR-D----DAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNSAKERVSLAFFYNP 311 (362)
T ss_pred CCceEEEEeeCCCCCcceeeE-C----CEEEECCCCCCeEEEEcchhhHhhcCCeeeccceecccCCCCCEEEEEEEecC
Confidence 99999999984 689999994 3 4699999999999999999999999999999999999 557899999999999
Q ss_pred CCCCeEecCCCCCCCCCCCCCCCccHHHHHHHHHHhhh
Q 028407 161 SHDCLVECLPTCKSDKNPPKFPPIKCETYLSQRYKDTH 198 (209)
Q Consensus 161 ~~d~~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~ 198 (209)
+.|++|+|+++++++++|++|+|++++||+..+..+..
T Consensus 312 ~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~ 349 (362)
T PLN02393 312 KSDLPIEPLKELVTPDRPALYPPMTFDEYRLFIRTKGP 349 (362)
T ss_pred CCCceEeCcHHhcCCCCCCCCCCccHHHHHHHHHhccc
Confidence 99999999999999999999999999999887775543
No 21
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=4.3e-49 Score=341.50 Aligned_cols=183 Identities=27% Similarity=0.417 Sum_probs=161.6
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccC---CccceeeeccccCCCCCCCCCcccccccCCCC
Q 028407 9 CFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLG---QAIATLRLLHYEGQISDPSKGMYGAGAHSDYG 85 (209)
Q Consensus 9 ~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~---~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~ 85 (209)
..|+||+.+.+|++.|.+++.+|+++|+++||+++++|+ ..+. .+.+.+|++|||| ++.++ ...|+++|||+|
T Consensus 109 ~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~~~~lRl~~YPp-~~~~~-~~~G~~~HTD~g 184 (321)
T PLN02299 109 LDDEYRKVMKDFALELEKLAEELLDLLCENLGLEKGYLK--KAFHGSKGPTFGTKVSNYPP-CPKPD-LVKGLRAHTDAG 184 (321)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhcCCCCccceeeeEecCC-CCCcc-cccCccCccCCC
Confidence 347899999999999999999999999999999999887 4442 3456899999999 44443 457999999999
Q ss_pred ceeEEeec-CCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCCC
Q 028407 86 LITLLATD-EVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSHD 163 (209)
Q Consensus 86 ~lTll~~d-~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~d 163 (209)
+||||+|| +++||||+. + |+|++|+|.+|++|||+||+||+||||+|||+.|||+ +...+|||++||++|+.|
T Consensus 185 ~lTlL~qd~~v~GLQV~~-~----g~Wi~V~p~pg~lvVNiGD~l~~~Tng~~kS~~HRVv~~~~~~R~Si~~F~~p~~d 259 (321)
T PLN02299 185 GIILLFQDDKVSGLQLLK-D----GEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVVAQTDGNRMSIASFYNPGSD 259 (321)
T ss_pred eEEEEEecCCCCCcCccc-C----CeEEECCCCCCeEEEEeCHHHHHHhCCceecccceeecCCCCCEEEEEEEecCCCC
Confidence 99999997 599999983 3 4699999999999999999999999999999999999 557789999999999999
Q ss_pred CeEecCCCCCCCC--CCCCCCCccHHHHHHHHHHhhhcc
Q 028407 164 CLVECLPTCKSDK--NPPKFPPIKCETYLSQRYKDTHAD 200 (209)
Q Consensus 164 ~~i~p~~~~~~~~--~p~~y~~~t~~e~~~~~~~~~~~~ 200 (209)
++|+|++++++++ +|++|+|++++||+..++++..+.
T Consensus 260 ~~i~pl~~~v~~~~~~p~~y~p~~~~e~l~~~~~~~~~~ 298 (321)
T PLN02299 260 AVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGLKFQA 298 (321)
T ss_pred ceEeCchHhcCcccCCCcCCCCCcHHHHHHHHHHcccCC
Confidence 9999999998765 589999999999999998765543
No 22
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.9e-48 Score=339.60 Aligned_cols=174 Identities=29% Similarity=0.412 Sum_probs=154.1
Q ss_pred cCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCC-ccceeeeccccCCCCCCCCCcccccccCCCCc
Q 028407 8 LCFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQ-AIATLRLLHYEGQISDPSKGMYGAGAHSDYGL 86 (209)
Q Consensus 8 l~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~-~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~ 86 (209)
-.+++||+.+.+|+.+|.+++..|++++|++||+++++|. ..+.. ..+.+|++|||| ++.+ +..+|+++|||+|+
T Consensus 155 ~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~LGl~~~~f~--~~~~~~~~~~lRl~~YPp-~~~~-~~~~g~~~HTD~g~ 230 (348)
T PLN00417 155 QVPVGFRETLHEYTMKQRLVIEKFFKAMARSLELEENCFL--EMYGENATMDTRFNMYPP-CPRP-DKVIGVKPHADGSA 230 (348)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhccCccceeeeeecCC-CCCc-ccccCCcCccCCCc
Confidence 3457899999999999999999999999999999999887 44443 346799999999 4444 35689999999999
Q ss_pred eeEEeec-CCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCCCC
Q 028407 87 ITLLATD-EVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSHDC 164 (209)
Q Consensus 87 lTll~~d-~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~d~ 164 (209)
||||+|| .++||||+. + |+|++|+|.||++|||+||+||+||||+|+|++|||+ +...+|||++||++|+.|+
T Consensus 231 lTlL~qd~~v~GLQV~~-~----g~Wi~V~p~pg~lVVNiGD~Le~~Tng~~kSt~HRVv~~~~~~R~Si~fF~~P~~d~ 305 (348)
T PLN00417 231 FTLLLPDKDVEGLQFLK-D----GKWYKAPIVPDTILINVGDQMEIMSNGIYKSPVHRVVTNREKERISVATFCIPGADK 305 (348)
T ss_pred eEEEEecCCCCceeEeE-C----CeEEECCCCCCcEEEEcChHHHHHhCCeecccceEEecCCCCCEEEEEEEecCCCCc
Confidence 9999997 699999984 3 4699999999999999999999999999999999999 4577899999999999999
Q ss_pred eEecCCCCCCCCCCCCCCCccHHHHH
Q 028407 165 LVECLPTCKSDKNPPKFPPIKCETYL 190 (209)
Q Consensus 165 ~i~p~~~~~~~~~p~~y~~~t~~e~~ 190 (209)
+|+|+++++++++|++|++++.+++.
T Consensus 306 ~i~pl~~~v~~~~p~~Y~~~~~~~~~ 331 (348)
T PLN00417 306 EIQPVDGLVSEARPRLYKTVKKYVEL 331 (348)
T ss_pred eecCchHhcCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999954433
No 23
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=2.6e-47 Score=332.42 Aligned_cols=170 Identities=31% Similarity=0.529 Sum_probs=152.9
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCC--CCCCCCccccCCccceeeeccccCCCCCCCCCcccccccCCCCce
Q 028407 10 FHIFQVCLIYFVSAPREVAKAVARIIALALDLD--ADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLI 87 (209)
Q Consensus 10 ~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~--~~~~~~~~~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~l 87 (209)
.|+||+++.+|+++|.+++..|+++||++||++ +++|. ..+..+.+.+|++||||. +.+ +..+|+++|||+|+|
T Consensus 153 ~p~fr~~~~~y~~~~~~La~~ll~~lA~~Lgl~~~~~~f~--~~~~~~~~~lRl~~YPp~-~~~-~~~~g~~aHTD~g~l 228 (341)
T PLN02984 153 LESFRVLMEEYGKHLTRIAVTLFEAIAKTLSLELSGDQKM--SYLSESTGVIRVYRYPQC-SNE-AEAPGMEVHTDSSVI 228 (341)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHH--HHhcCccceEEEEeCCCC-CCc-ccccCccCccCCCce
Confidence 468999999999999999999999999999999 88887 666777889999999994 433 356899999999999
Q ss_pred eEEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc--CCCCCceEEEEccCCCCCCe
Q 028407 88 TLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL--GTGRERYSIAFFVEPSHDCL 165 (209)
Q Consensus 88 Tll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~--~~~~~R~Si~~F~~p~~d~~ 165 (209)
|||+||+++||||+. + |+|++|+|.||++|||+||+||+||||+|||++|||+ ....+|||++||++|+.|++
T Consensus 229 TlL~Qd~v~GLQV~~-~----g~Wv~V~p~pgalVVNiGD~Le~wTNg~~kSt~HRVv~~~~~~~R~Sia~F~~P~~d~~ 303 (341)
T PLN02984 229 SILNQDEVGGLEVMK-D----GEWFNVKPIANTLVVNLGDMMQVISDDEYKSVLHRVGKRNKKKERYSICYFVFPEEDCV 303 (341)
T ss_pred EEEEeCCCCCeeEee-C----CceEECCCCCCeEEEECChhhhhhcCCeeeCCCCccccCCCCCCeEEEEEEecCCCCCE
Confidence 999999999999984 3 4699999999999999999999999999999999996 34678999999999999999
Q ss_pred EecCCCCCCCCCCCCCCCccHHHHHHHHHHhhh
Q 028407 166 VECLPTCKSDKNPPKFPPIKCETYLSQRYKDTH 198 (209)
Q Consensus 166 i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~ 198 (209)
|+ |++|+|++++||+..++....
T Consensus 304 i~----------p~~y~p~t~~e~l~~~~~~~~ 326 (341)
T PLN02984 304 IK----------SSKYKPFTYSDFEAQVQLDVK 326 (341)
T ss_pred Ec----------cCCcCcccHHHHHHHHHhhhh
Confidence 96 368999999999998886554
No 24
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=4.2e-47 Score=328.75 Aligned_cols=186 Identities=31% Similarity=0.547 Sum_probs=165.2
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCC-ccceeeeccccCCCCCCCCCcccccccCCCC
Q 028407 7 CLCFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQ-AIATLRLLHYEGQISDPSKGMYGAGAHSDYG 85 (209)
Q Consensus 7 ~l~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~-~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~ 85 (209)
+-.++.||++|.+|.+++.+++..|+++|+++||++++++. ..+.. ..+.+|+++||| |++++ ..+|+++|||.+
T Consensus 127 p~~p~~~re~~~eY~~~~~~L~~~l~~~l~eslgl~~~~~~--~~~~~~~~~~~r~n~Yp~-cp~pe-~~lGl~~HtD~~ 202 (322)
T KOG0143|consen 127 PEGPPEFRETMEEYAKEVMELSEKLLRLLSESLGLEPEYLE--KLFGETGGQVMRLNYYPP-CPEPE-LTLGLGAHTDKS 202 (322)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH--HhhCCccceEEEEeecCC-CcCcc-ccccccCccCcC
Confidence 34467899999999999999999999999999999865554 34444 467999999999 66664 689999999999
Q ss_pred ceeEEeec-CCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCCC
Q 028407 86 LITLLATD-EVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSHD 163 (209)
Q Consensus 86 ~lTll~~d-~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~d 163 (209)
+||+|.|| .++||||++.+ |+|++|+|.||++|||+||+||+||||+|||+.|||+ +..++|+|+|+|+.|+.|
T Consensus 203 ~lTiLlqd~~V~GLQv~~~d----g~Wi~V~P~p~a~vVNiGD~l~~lSNG~ykSv~HRV~~n~~~~R~Sia~F~~p~~d 278 (322)
T KOG0143|consen 203 FLTILLQDDDVGGLQVFTKD----GKWIDVPPIPGAFVVNIGDMLQILSNGRYKSVLHRVVVNGEKERISVAFFVFPPLD 278 (322)
T ss_pred ceEEEEccCCcCceEEEecC----CeEEECCCCCCCEEEEcccHHhHhhCCcccceEEEEEeCCCCceEEEEEEecCCCC
Confidence 99999998 89999999722 5699999999999999999999999999999999999 456679999999999999
Q ss_pred CeEecCCCCCCCCCCCCCCCccHHHHHHHHHHhhhccc
Q 028407 164 CLVECLPTCKSDKNPPKFPPIKCETYLSQRYKDTHADL 201 (209)
Q Consensus 164 ~~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~~~ 201 (209)
.+|.|+++++++. |++|+++++.+|+..++.......
T Consensus 279 ~~i~p~~elv~~~-~~~Y~~~~~~~y~~~~~~~~~~~~ 315 (322)
T KOG0143|consen 279 KVIGPPEELVDEE-PPKYKPFTFGDYLEFYFSKKLQGK 315 (322)
T ss_pred ceecChhhhCCCC-CCccCcEEHHHHHHHHHhccccCc
Confidence 9999999998877 888999999999999998877653
No 25
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=1.6e-46 Score=315.79 Aligned_cols=182 Identities=40% Similarity=0.675 Sum_probs=159.6
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccCCccceeeeccccCCCCCCCCCcccccccCCCCcee
Q 028407 9 CFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYGLIT 88 (209)
Q Consensus 9 ~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~lT 88 (209)
+-|+||+.+..|++.|.+++.+||++||.+|++++++|+ ..++++.+.+|+++||+.+.. .+..+.|+|+|+|+||
T Consensus 128 ~ip~~r~~ll~~~~~~~~~~~rLL~aiA~~LdL~~d~Fd--~~~~d~~~~~RLlrYP~~~~~--~~~~~~GaHtD~G~lT 203 (322)
T COG3491 128 AIPGLRDALLQYYRAMTAVGLRLLRAIALGLDLPEDFFD--KRTSDPNSVLRLLRYPSRPAR--EGADGVGAHTDYGLLT 203 (322)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhh--hccCCchheEEEEecCCCccc--ccccccccccCCCeEE
Confidence 678999999999999999999999999999999999999 678999999999999984432 3456789999999999
Q ss_pred EEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCCCCCCeEe
Q 028407 89 LLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEPSHDCLVE 167 (209)
Q Consensus 89 ll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p~~d~~i~ 167 (209)
+|+||+++||||+.+.| +|++|+|.||++|||+||+||+||||+|+||+|||+ +++.+||||+||+.|+.|+.|.
T Consensus 204 Ll~Qd~~~GLqv~~~~g----~Wl~v~P~pgtlvVNiGdmLe~~Tng~lrST~HRV~~~~~~~R~SipfF~~p~~Da~I~ 279 (322)
T COG3491 204 LLFQDDVGGLEVRPPNG----GWLDVPPIPGTLVVNIGDMLERWTNGRLRSTVHRVRNPPGVDRYSIPFFLEPNFDAEIA 279 (322)
T ss_pred EEEecccCCeEEecCCC----CeeECCCCCCeEEEeHHHHHHHHhCCeeccccceeecCCCccceeeeeeccCCCCcccc
Confidence 99999999999999875 499999999999999999999999999999999999 5567999999999999999999
Q ss_pred cCCC-CCCCCCCCCCCCccHHHHHHHHHHhhh
Q 028407 168 CLPT-CKSDKNPPKFPPIKCETYLSQRYKDTH 198 (209)
Q Consensus 168 p~~~-~~~~~~p~~y~~~t~~e~~~~~~~~~~ 198 (209)
|+.. +.+.+.++++.+-+...++...+..+|
T Consensus 280 Pl~~l~~~~a~~~~~~~t~~~n~l~r~~~~n~ 311 (322)
T COG3491 280 PLLPLCPEAANEPRGPGTDPDNPLLRDYATNF 311 (322)
T ss_pred ccCCCCcccccCCcCCCCCCCchHHHHHHHHH
Confidence 8764 455667778877655555555555444
No 26
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=3.7e-46 Score=320.69 Aligned_cols=175 Identities=28% Similarity=0.433 Sum_probs=151.1
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccccC---CccceeeeccccCCCCCCCCCcccccccCC
Q 028407 7 CLCFHIFQVCLIYFVSAPREVAKAVARIIALALDLDADFFDKPEMLG---QAIATLRLLHYEGQISDPSKGMYGAGAHSD 83 (209)
Q Consensus 7 ~l~~~~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~---~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD 83 (209)
+-.+|+||+.+++|+++|.+++..|+++++++||+++++|. ..+. .+.+.+|++||||. ++++ ...|+++|||
T Consensus 102 P~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~--~~~~~~~~~~~~lrl~~YP~~-~~~~-~~~G~~~HtD 177 (303)
T PLN02403 102 PNLSEDLRKTMDEYIAQLIKLAEKLSELMSENLGLDKDYIK--EAFSGNKGPSVGTKVAKYPEC-PRPE-LVRGLREHTD 177 (303)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH--HHhccCCCccceeeeEcCCCC-CCcc-cccCccCccC
Confidence 33357899999999999999999999999999999999887 4443 33457999999984 4443 4578999999
Q ss_pred CCceeEEeec-CCCceeEEecCCCCCCceEEccCCC-CcEEEechhHHHHHhCCeeeccccccc-CCCCCceEEEEccCC
Q 028407 84 YGLITLLATD-EVAGLQICKDRDAKPQLWEDVAPMK-GAFIVNLGDMLERWSNCIFKSTLHRVL-GTGRERYSIAFFVEP 160 (209)
Q Consensus 84 ~~~lTll~~d-~~~GLqV~~~~g~~~g~W~~v~~~~-g~lvVn~Gd~l~~~TnG~~~s~~HRV~-~~~~~R~Si~~F~~p 160 (209)
+|+||+|+|+ .++||||+. + |+|++|+|.| |++|||+||+||+||||+|+|++|||+ +.+.+|||++||+.|
T Consensus 178 ~g~lTlL~q~~~v~GLqV~~-~----g~Wi~V~p~p~~~lvVNvGD~L~~~Tng~~~S~~HRVv~~~~~~R~Si~~F~~p 252 (303)
T PLN02403 178 AGGIILLLQDDQVPGLEFLK-D----GKWVPIPPSKNNTIFVNTGDQLEVLSNGRYKSTLHRVMADKNGSRLSIATFYNP 252 (303)
T ss_pred CCeEEEEEecCCCCceEecc-C----CeEEECCCCCCCEEEEEehHHHHHHhCCeeecccceeecCCCCCEEEEEEEEcC
Confidence 9999999997 599999973 3 4699999998 699999999999999999999999999 557789999999999
Q ss_pred CCCCeEecCCCCCCCCCCCCCC-CccHHHHHHHHHHhh
Q 028407 161 SHDCLVECLPTCKSDKNPPKFP-PIKCETYLSQRYKDT 197 (209)
Q Consensus 161 ~~d~~i~p~~~~~~~~~p~~y~-~~t~~e~~~~~~~~~ 197 (209)
+.|++|+|+++++ |+ +++++||++.+.+..
T Consensus 253 ~~d~~i~pl~~~~-------~~~~~~~~eyl~~~~~~~ 283 (303)
T PLN02403 253 AGDAIISPAPKLL-------YPSNYRFQDYLKLYSTTK 283 (303)
T ss_pred CCCCeEeCchhhC-------CCCCccHHHHHHHHHHhc
Confidence 9999999999875 33 499999999888633
No 27
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.92 E-value=3.1e-25 Score=160.42 Aligned_cols=94 Identities=48% Similarity=0.793 Sum_probs=73.1
Q ss_pred ceeeeccccCCCCCCCCCcccccccCCC--CceeEEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhC
Q 028407 57 ATLRLLHYEGQISDPSKGMYGAGAHSDY--GLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSN 134 (209)
Q Consensus 57 ~~~rl~~Yp~~~~~~~~~~~g~~~HtD~--~~lTll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~Tn 134 (209)
+.+|+++|+| ++...++++|+|. +++|+++++.++|||+..++ +|+.|++.++.++||+||+|++|||
T Consensus 2 ~~~~~~~Y~~-----~~~~~~~~~H~D~~~~~~Til~~~~~~gL~~~~~~-----~~~~v~~~~~~~~v~~G~~l~~~t~ 71 (98)
T PF03171_consen 2 SQLRLNRYPP-----PENGVGIGPHTDDEDGLLTILFQDEVGGLQVRDDG-----EWVDVPPPPGGFIVNFGDALEILTN 71 (98)
T ss_dssp -EEEEEEE-S-----CCGCEEEEEEEES--SSEEEEEETSTS-EEEEETT-----EEEE----TTCEEEEEBHHHHHHTT
T ss_pred CEEEEEECCC-----cccCCceeCCCcCCCCeEEEEecccchheeccccc-----cccCccCccceeeeeceeeeecccC
Confidence 5799999998 2355799999999 99999999889999999874 5999999999999999999999999
Q ss_pred CeeecccccccCC-CCCceEEEEccCC
Q 028407 135 CIFKSTLHRVLGT-GRERYSIAFFVEP 160 (209)
Q Consensus 135 G~~~s~~HRV~~~-~~~R~Si~~F~~p 160 (209)
|.++|+.|||++. ...|+|++||++|
T Consensus 72 g~~~~~~HrV~~~~~~~R~s~~~f~~p 98 (98)
T PF03171_consen 72 GRYPATLHRVVPPTEGERYSLTFFLRP 98 (98)
T ss_dssp TSS----EEEE--STS-EEEEEEEEE-
T ss_pred CccCCceeeeEcCCCCCEEEEEEEECC
Confidence 9999999999954 6899999999987
No 28
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=96.26 E-value=0.003 Score=45.04 Aligned_cols=80 Identities=26% Similarity=0.418 Sum_probs=51.8
Q ss_pred eeeccccCCCCCCCCCcccccccCCC-----CceeEEee--cCC-----CceeEEecCCCCCCceEEcc-----CCCCcE
Q 028407 59 LRLLHYEGQISDPSKGMYGAGAHSDY-----GLITLLAT--DEV-----AGLQICKDRDAKPQLWEDVA-----PMKGAF 121 (209)
Q Consensus 59 ~rl~~Yp~~~~~~~~~~~g~~~HtD~-----~~lTll~~--d~~-----~GLqV~~~~g~~~g~W~~v~-----~~~g~l 121 (209)
+++++|.+- -.+++|+|. ..+|+++. +.. +.|++.... ...+....++ |.+|.+
T Consensus 1 ~~~~~y~~G--------~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~-~~~~~~~~~~~~~~~p~~g~~ 71 (100)
T PF13640_consen 1 MQLNRYPPG--------GFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSK-DSDDVSREVEDFDIVPKPGRL 71 (100)
T ss_dssp -EEEEEETT--------EEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS--TSSTCEEEGGGSEE-BTTEE
T ss_pred CEEEEECcC--------CEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccc-cCCCcceEEEeccccCCCCEE
Confidence 467778651 257899998 58888843 222 457777532 1123456666 999999
Q ss_pred EEechhHHHHHhCCeeeccccccc-C-CCCCceEEEEcc
Q 028407 122 IVNLGDMLERWSNCIFKSTLHRVL-G-TGRERYSIAFFV 158 (209)
Q Consensus 122 vVn~Gd~l~~~TnG~~~s~~HRV~-~-~~~~R~Si~~F~ 158 (209)
|+.-+ ...+|+|. . .+..|+++..|+
T Consensus 72 v~F~~-----------~~~~H~v~~v~~~~~R~~l~~~~ 99 (100)
T PF13640_consen 72 VIFPS-----------DNSLHGVTPVGEGGRRYSLTFWF 99 (100)
T ss_dssp EEEES-----------CTCEEEEEEE-EESEEEEEEEEE
T ss_pred EEEeC-----------CCCeecCcccCCCCCEEEEEEEE
Confidence 87655 45799998 4 578999999886
No 29
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=94.95 E-value=0.18 Score=41.89 Aligned_cols=47 Identities=23% Similarity=0.274 Sum_probs=34.7
Q ss_pred CceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeecccccccC-CCCCceEEEEccC
Q 028407 96 AGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLG-TGRERYSIAFFVE 159 (209)
Q Consensus 96 ~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~~-~~~~R~Si~~F~~ 159 (209)
+.|.+.+..| =..|.|..|.+|+.-. +.+|+|.+ ....||++.+..+
T Consensus 130 GEl~~~~~~g-----~~~Vkp~aG~~vlfps------------~~lH~v~pVt~G~R~~~~~Wi~ 177 (226)
T PRK05467 130 GELVIEDTYG-----EHRVKLPAGDLVLYPS------------TSLHRVTPVTRGVRVASFFWIQ 177 (226)
T ss_pred CceEEecCCC-----cEEEecCCCeEEEECC------------CCceeeeeccCccEEEEEecHH
Confidence 4477765543 2578888899888764 47899994 6778999988875
No 30
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=94.46 E-value=0.48 Score=37.60 Aligned_cols=71 Identities=21% Similarity=0.135 Sum_probs=45.2
Q ss_pred cccccCCC----CceeEEeec----CCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeecccccccC--
Q 028407 77 GAGAHSDY----GLITLLATD----EVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLG-- 146 (209)
Q Consensus 77 g~~~HtD~----~~lTll~~d----~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~~-- 146 (209)
....|+|. ..+|++..- ..+|+-++..-+. ..-=+.+.+.+|++++..|..+ .|-|.+
T Consensus 86 ~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~-~~~g~~~~~~~GtVl~~~~~~~-----------~Hgvtpv~ 153 (171)
T PF12851_consen 86 CTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDP-NILGVAFAYQPGTVLIFCAKRE-----------LHGVTPVE 153 (171)
T ss_pred CccceecCCCCCCCeEEEEecCCccccCceEecccccc-ccCCEEEecCCCcEEEEcccce-----------eeecCccc
Confidence 35668887 667777652 2356666544000 0012778899999999988433 566652
Q ss_pred ----CCCCceEEEEccC
Q 028407 147 ----TGRERYSIAFFVE 159 (209)
Q Consensus 147 ----~~~~R~Si~~F~~ 159 (209)
.+.+|+|++||.+
T Consensus 154 ~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 154 SPNRNHGTRISLVFYQH 170 (171)
T ss_pred CCCCCCCeEEEEEEEeE
Confidence 1478999999975
No 31
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=94.06 E-value=0.59 Score=36.71 Aligned_cols=107 Identities=23% Similarity=0.215 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCccccCCccceeeeccccCCCCCCCCCcccccccCCCC--------ceeEEee--c-
Q 028407 25 REVAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYG--------LITLLAT--D- 93 (209)
Q Consensus 25 ~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~--------~lTll~~--d- 93 (209)
..+...|.+.++..++++.. .......+++.+|.+- -...+|.|.. .+|+++. +
T Consensus 58 ~~~~~~l~~~i~~~~~~~~~-------~~~~~~~~~~~~Y~~g--------~~~~~H~D~~~~~~~~~r~~T~~~yLn~~ 122 (178)
T smart00702 58 DLVIERIRQRLADFLGLLRG-------LPLSAEDAQVARYGPG--------GHYGPHVDNFEDDENGDRIATFLLYLNDV 122 (178)
T ss_pred CHHHHHHHHHHHHHHCCCch-------hhccCcceEEEEECCC--------CcccCcCCCCCCCCCCCeEEEEEEEeccC
Confidence 35667777777777776521 1123445888999872 1356798865 6887765 2
Q ss_pred CC-CceeEEecCCCCCCceEEccCCCCcEEEec-hhHHHHHhCCeeecccccccC-CCCCceEEEEccC
Q 028407 94 EV-AGLQICKDRDAKPQLWEDVAPMKGAFIVNL-GDMLERWSNCIFKSTLHRVLG-TGRERYSIAFFVE 159 (209)
Q Consensus 94 ~~-~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~-Gd~l~~~TnG~~~s~~HRV~~-~~~~R~Si~~F~~ 159 (209)
.. +.|.+...+. .....|.|..|.+|+.- ++ +..+|.|.+ ....|+++..+++
T Consensus 123 ~~GG~~~f~~~~~---~~~~~v~P~~G~~v~f~~~~----------~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 123 EEGGELVFPGLGL---MVCATVKPKKGDLLFFPSGR----------GRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred CcCceEEecCCCC---ccceEEeCCCCcEEEEeCCC----------CCccccCCcceeCCEEEEEEEEC
Confidence 12 3366554321 12568889999888754 32 167899984 3578999988763
No 32
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=92.46 E-value=3.1 Score=34.25 Aligned_cols=82 Identities=15% Similarity=0.151 Sum_probs=47.6
Q ss_pred eeeeccccCCCCCCCCCcccccccCCCC-----ceeEEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHH
Q 028407 58 TLRLLHYEGQISDPSKGMYGAGAHSDYG-----LITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERW 132 (209)
Q Consensus 58 ~~rl~~Yp~~~~~~~~~~~g~~~HtD~~-----~lTll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~ 132 (209)
..-+|+|.+ +. +++.|.|-. ..-+-++=+.+..-..... ...+.+..+....|+++|+-|++ +.|
T Consensus 117 a~LvN~Y~~-------G~-~mg~H~D~~E~~~~~pI~SvSLG~~~~F~~~~~-~~~~~~~~l~L~~Gdllvm~G~s-r~~ 186 (213)
T PRK15401 117 ACLINRYAP-------GA-KLSLHQDKDERDFRAPIVSVSLGLPAVFQFGGL-KRSDPLQRILLEHGDVVVWGGPS-RLR 186 (213)
T ss_pred EEEEEeccC-------cC-ccccccCCCcccCCCCEEEEeCCCCeEEEeccc-CCCCceEEEEeCCCCEEEECchH-hhe
Confidence 467899987 22 788999942 1111111122222222111 11245899999999999999985 332
Q ss_pred hCCeeecccccccC--C------CCCceEEEEc
Q 028407 133 SNCIFKSTLHRVLG--T------GRERYSIAFF 157 (209)
Q Consensus 133 TnG~~~s~~HRV~~--~------~~~R~Si~~F 157 (209)
.|.|.+ . +..|+|+.|-
T Consensus 187 --------~HgVp~~~~~~~p~~g~~RINLTFR 211 (213)
T PRK15401 187 --------YHGILPLKAGEHPLTGECRINLTFR 211 (213)
T ss_pred --------eccCCcCCCCcCCCCCCCeEEEEeE
Confidence 355541 1 3479999873
No 33
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=87.23 E-value=1.2 Score=35.19 Aligned_cols=81 Identities=21% Similarity=0.270 Sum_probs=43.6
Q ss_pred ceeeeccccCCCCCCCCCcccccccCCCCce---eEEee--cCCC-ceeEEecCCCCCCceEEccCCCCcEEEechhHHH
Q 028407 57 ATLRLLHYEGQISDPSKGMYGAGAHSDYGLI---TLLAT--DEVA-GLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLE 130 (209)
Q Consensus 57 ~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~l---Tll~~--d~~~-GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~ 130 (209)
...-+|+|.+ +. ++++|.|...+ ..+.. =+.. -+.+.... ..+..+.+...+|+++|+-|++=.
T Consensus 97 n~~liN~Y~~-------g~-~i~~H~D~~~~~~~~~I~slSLG~~~~~~f~~~~--~~~~~~~~~L~~gsl~vm~g~~r~ 166 (194)
T PF13532_consen 97 NQCLINYYRD-------GS-GIGPHSDDEEYGFGPPIASLSLGSSRVFRFRNKS--DDDEPIEVPLPPGSLLVMSGEARY 166 (194)
T ss_dssp SEEEEEEESS-------TT--EEEE---TTC-CCSEEEEEEEES-EEEEEEECG--GTS-EEEEEE-TTEEEEEETTHHH
T ss_pred CEEEEEecCC-------CC-CcCCCCCcccccCCCcEEEEEEccCceEEEeecc--CCCccEEEEcCCCCEEEeChHHhh
Confidence 3567888887 23 79999997633 22211 1112 23333321 235799999999999999998855
Q ss_pred HHhCCeeecccccccCC----------CCCceEEEE
Q 028407 131 RWSNCIFKSTLHRVLGT----------GRERYSIAF 156 (209)
Q Consensus 131 ~~TnG~~~s~~HRV~~~----------~~~R~Si~~ 156 (209)
.| |.|.+. ...|+||.|
T Consensus 167 ~~---------H~I~~~~~~~~~~~~~~~~RislTf 193 (194)
T PF13532_consen 167 DW---------HGIPPVKKDTHPSHYVRGRRISLTF 193 (194)
T ss_dssp HE---------EEE-S-SCEEEESTEE-S-EEEEEE
T ss_pred he---------eEcccccCCccccccCCCCEEEEEe
Confidence 43 555422 237999987
No 34
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=78.94 E-value=33 Score=27.87 Aligned_cols=37 Identities=24% Similarity=0.249 Sum_probs=29.3
Q ss_pred ceEEccCCCCcEEEechhHHHHHhCCeeecccccccCC--CCCceEEEEcc
Q 028407 110 LWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLGT--GRERYSIAFFV 158 (209)
Q Consensus 110 ~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~~~--~~~R~Si~~F~ 158 (209)
.|+.+.|.+|.+|+.-.. -.|+|.+. +.+|+|++|=+
T Consensus 160 ~~~~v~P~~G~lvlFPS~------------L~H~v~p~~~~~~RISiSFNl 198 (201)
T TIGR02466 160 RFVYVPPQEGRVLLFESW------------LRHEVPPNESEEERISVSFNY 198 (201)
T ss_pred ccEEECCCCCeEEEECCC------------CceecCCCCCCCCEEEEEEee
Confidence 488999999999976552 37999843 67999999854
No 35
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=77.67 E-value=20 Score=28.34 Aligned_cols=63 Identities=11% Similarity=0.080 Sum_probs=36.8
Q ss_pred ceeeeccccCCCCCCCCCcccccccCCCCcee---EE--eecCCCceeEEecCCCCCCceEEccCCCCcEEEechhH
Q 028407 57 ATLRLLHYEGQISDPSKGMYGAGAHSDYGLIT---LL--ATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDM 128 (209)
Q Consensus 57 ~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~lT---ll--~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~ 128 (209)
...-+|+|++ + -+++.|.|-.-+. .+ ++=+.+..-..... ..++....+...+|+++|+-|+.
T Consensus 95 n~~LvN~Y~~-------G-d~mg~H~D~~e~~~~~pI~SvSLG~~r~F~~~~~-~~~~~~~~l~L~sGsllvM~G~s 162 (169)
T TIGR00568 95 DACLVNRYAP-------G-ATLSLHQDRDEPDLRAPLLSVSLGLPAIFLIGGL-KRNDPPKRLRLHSGDVVIMGGES 162 (169)
T ss_pred CEEEEEeecC-------C-CccccccccccccCCCCEEEEeCCCCEEEEecCC-cCCCceEEEEeCCCCEEEECCch
Confidence 3567899987 1 3689999953221 11 11122222222211 11345889999999999999974
No 36
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=77.61 E-value=3.1 Score=29.59 Aligned_cols=36 Identities=28% Similarity=0.327 Sum_probs=23.6
Q ss_pred CceEEccCCCCcEEEechhHHHHHhCCeeecccccccC--CCCCceEEEE
Q 028407 109 QLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLG--TGRERYSIAF 156 (209)
Q Consensus 109 g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~~--~~~~R~Si~~ 156 (209)
..+..++|.+|.+||.-+. ..|+|.+ .+.+|+||+|
T Consensus 63 ~~~~~~~p~~G~lvlFPs~------------l~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 63 SPYYIVEPEEGDLVLFPSW------------LWHGVPPNNSDEERISISF 100 (101)
T ss_dssp -SEEEE---TTEEEEEETT------------SEEEE----SSS-EEEEEE
T ss_pred CceEEeCCCCCEEEEeCCC------------CEEeccCcCCCCCEEEEEc
Confidence 4588899999999987763 4799984 3679999987
No 37
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=59.26 E-value=32 Score=27.99 Aligned_cols=23 Identities=35% Similarity=0.658 Sum_probs=16.4
Q ss_pred eec-ccccccC-CCCCceEEEEccC
Q 028407 137 FKS-TLHRVLG-TGRERYSIAFFVE 159 (209)
Q Consensus 137 ~~s-~~HRV~~-~~~~R~Si~~F~~ 159 (209)
|+| ++|+|.+ ....|+.+.|+++
T Consensus 156 ypStSlH~VtPVTRg~R~asffW~q 180 (229)
T COG3128 156 YPSTSLHEVTPVTRGERFASFFWIQ 180 (229)
T ss_pred cccccceeccccccCceEEEeeehH
Confidence 444 5899984 5668998777665
No 38
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=59.09 E-value=25 Score=28.85 Aligned_cols=68 Identities=22% Similarity=0.262 Sum_probs=36.8
Q ss_pred eeeeccccCCCCCCCCCcccccccCCCCceeEEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhC
Q 028407 58 TLRLLHYEGQISDPSKGMYGAGAHSDYGLITLLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSN 134 (209)
Q Consensus 58 ~~rl~~Yp~~~~~~~~~~~g~~~HtD~~~lTll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~Tn 134 (209)
.+|..||+|..+++ +...++. |--..+.++..+-..+..- +.|+-+.||+.-|+.++|+||.==.+.+
T Consensus 91 ~~~~~H~Hp~ade~-E~y~vi~-----G~g~m~v~~~~G~~~v~~~---~~Gd~iyVPp~~gH~t~N~Gd~pLvf~~ 158 (209)
T COG2140 91 AMRELHYHPNADEP-EIYYVLK-----GEGRMLVQKPEGEARVIAV---RAGDVIYVPPGYGHYTINTGDEPLVFLN 158 (209)
T ss_pred cccccccCCCCCcc-cEEEEEe-----ccEEEEEEcCCCcEEEEEe---cCCcEEEeCCCcceEeecCCCCCEEEEE
Confidence 57788888854333 2333322 1112233333222333222 1356888999999999999985444444
No 39
>KOG3710 consensus EGL-Nine (EGLN) protein [Signal transduction mechanisms]
Probab=57.44 E-value=34 Score=28.70 Aligned_cols=69 Identities=22% Similarity=0.327 Sum_probs=50.2
Q ss_pred ccccCCCCceeEEee---c-----CCCceeEEecCCCCCCceEEccCCCCcEEEechhHHHHHhCCeeecccccccCCCC
Q 028407 78 AGAHSDYGLITLLAT---D-----EVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDMLERWSNCIFKSTLHRVLGTGR 149 (209)
Q Consensus 78 ~~~HtD~~~lTll~~---d-----~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~l~~~TnG~~~s~~HRV~~~~~ 149 (209)
-.+|-|.-+||.++. + ..++|++.-... -...++.|.-|-+++. ||. +...|.|.+.-.
T Consensus 162 DNP~gDGRcITcIYYlNqNWD~kv~Gg~Lri~pe~~---~~~adieP~fdrLlff-------wSd---rrnPhev~Pa~~ 228 (280)
T KOG3710|consen 162 DNPHGDGRCITCIYYLNQNWDVKVHGGILRIFPEGS---TTFADIEPKFDRLLFF-------WSD---RRNPHEVQPAYA 228 (280)
T ss_pred cCCCCCceEEEEEEEcccCcceeeccceeEeccCCC---CcccccCcCCCeEEEE-------Eec---CCCccccccccc
Confidence 357888899998876 2 124577775533 2577888888888875 443 457899998888
Q ss_pred CceEEEEccC
Q 028407 150 ERYSIAFFVE 159 (209)
Q Consensus 150 ~R~Si~~F~~ 159 (209)
.||.|...+-
T Consensus 229 tryaitvwyf 238 (280)
T KOG3710|consen 229 TRYAITVWYF 238 (280)
T ss_pred cceEEEEEEe
Confidence 9999987764
No 40
>COG3145 AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair]
Probab=40.09 E-value=59 Score=26.38 Aligned_cols=51 Identities=14% Similarity=-0.029 Sum_probs=30.5
Q ss_pred cccccCCCCc--ee---EEeecCCCceeEEecCCCCCCceEEccCCCCcEEEechhH
Q 028407 77 GAGAHSDYGL--IT---LLATDEVAGLQICKDRDAKPQLWEDVAPMKGAFIVNLGDM 128 (209)
Q Consensus 77 g~~~HtD~~~--lT---ll~~d~~~GLqV~~~~g~~~g~W~~v~~~~g~lvVn~Gd~ 128 (209)
++++|.|-.- .+ +-.+=+.+..-.....+. .+.+..+...+|.++|..|..
T Consensus 118 ~ig~HqD~~e~~~~~~v~slSLg~~~~F~~~~~~r-~~~~~~~~L~~Gdvvvm~G~~ 173 (194)
T COG3145 118 SIGWHQDKDEEDDRPPVASLSLGAPCIFRLRGRRR-RGPGLRLRLEHGDVVVMGGPS 173 (194)
T ss_pred ccccccccccccCCCceEEEecCCCeEEEeccccC-CCCceeEEecCCCEEEecCCc
Confidence 5888988531 11 111112233344433332 467999999999999999844
No 41
>COG2879 Uncharacterized small protein [Function unknown]
Probab=37.56 E-value=37 Score=22.42 Aligned_cols=22 Identities=14% Similarity=0.255 Sum_probs=18.7
Q ss_pred CCCCccHHHHHHHHHHhhhccc
Q 028407 180 KFPPIKCETYLSQRYKDTHADL 201 (209)
Q Consensus 180 ~y~~~t~~e~~~~~~~~~~~~~ 201 (209)
.-+++|++||.+.+....|+.+
T Consensus 38 d~p~mT~~EFfrec~daRy~~g 59 (65)
T COG2879 38 DKPPMTYEEFFRECQDARYGGG 59 (65)
T ss_pred CCCcccHHHHHHHHHHhhcCCC
Confidence 4468999999999999998763
No 42
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=26.27 E-value=90 Score=19.72 Aligned_cols=26 Identities=8% Similarity=0.183 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCC
Q 028407 22 SAPREVAKAVARIIALALDLDADFFD 47 (209)
Q Consensus 22 ~~~~~la~~ll~~la~~Lgl~~~~~~ 47 (209)
++-.+++..|.+++++.+|.|++.+.
T Consensus 15 EqK~~L~~~it~a~~~~~~~p~~~v~ 40 (60)
T PRK02289 15 EQKNALAREVTEVVSRIAKAPKEAIH 40 (60)
T ss_pred HHHHHHHHHHHHHHHHHhCcCcceEE
Confidence 45678899999999999999987654
No 43
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=26.07 E-value=99 Score=18.92 Aligned_cols=26 Identities=15% Similarity=0.147 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCC
Q 028407 22 SAPREVAKAVARIIALALDLDADFFD 47 (209)
Q Consensus 22 ~~~~~la~~ll~~la~~Lgl~~~~~~ 47 (209)
++-.+++..|.+++++.+|.+++.+.
T Consensus 14 eqk~~l~~~i~~~l~~~~g~~~~~v~ 39 (58)
T cd00491 14 EQKRELIERVTEAVSEILGAPEATIV 39 (58)
T ss_pred HHHHHHHHHHHHHHHHHhCcCcccEE
Confidence 45678889999999999999976543
No 44
>PRK01964 4-oxalocrotonate tautomerase; Provisional
Probab=25.06 E-value=99 Score=19.64 Aligned_cols=26 Identities=15% Similarity=0.275 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCC
Q 028407 22 SAPREVAKAVARIIALALDLDADFFD 47 (209)
Q Consensus 22 ~~~~~la~~ll~~la~~Lgl~~~~~~ 47 (209)
++-.+++..|.+++++.||.+++.+.
T Consensus 15 eqk~~l~~~it~~l~~~lg~p~~~v~ 40 (64)
T PRK01964 15 EKIKNLIREVTEAISATLDVPKERVR 40 (64)
T ss_pred HHHHHHHHHHHHHHHHHhCcChhhEE
Confidence 45678889999999999999986543
No 45
>PF01361 Tautomerase: Tautomerase enzyme; InterPro: IPR004370 4-Oxalocrotonate tautomerase (4-OT) catalyzes the isomerisation of beta,gamma-unsaturated enones to their alpha,beta-isomers. The enzyme is part of a plasmid-encoded pathway, which enables bacteria harbouring the plasmid to use various aromatic hydrocarbons as their sole sources of carbon and energy. The enzyme is a barrel-shaped hexamer, which can be viewed as a trimer of dimers. The hexamer contains a hydrophobic core formed by three beta-sheets and surrounded by three pairs of alpha-helices. Each 4-OT monomer of 62 amino acids has a relatively simple beta-alpha-beta fold as described by the structure of the enzyme from Pseudomonas putida []. The monomer begins with a conserved proline at the start of a beta-strand, followed by an alpha-helix and a 310 helix preceding a second parallel beta-strand, and ends with a beta-hairpin near the C terminus. The dimer results from antiparallel interactions between the beta-sheets and alpha-helices of the two monomers, forming a four-stranded beta-sheet with antiparallel alpha-helices on one side, creating two active sites, one at each end of the beta-sheet. Three dimers further associate to form a hexamer by the interactions of the strands of the C-terminal beta-hairpin loops with the edges of the four-stranded beta-sheets of neighbouring dimers, creating a series of cross-links that stabilise the hexamer Pro-1 of the mature protein functions as the general base while Arg-39 and an ordered water molecule each provide a hydrogen bond to the C-2 oxygen of substrate. Arg-39 plays an additional role in the binding of the C-1 carboxylate group. Arg-11 participates both in substrate binding and in catalysis. It interacts with the C-6 carboxylate group, thereby holding the substrate in place and drawing electron density to the C-5 position. The hydrophobic nature of the active site, which lowers the pKa of Pro-1 and provides a favourable environment for catalysis, is largely maintained by Phe-50. Because several Arg residues located near the active site are not conserved among all members of this family and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.; GO: 0016853 isomerase activity, 0006725 cellular aromatic compound metabolic process; PDB: 4OTA_H 4OTC_G 4OTB_J 2FM7_A 1BJP_B 1S0Y_K 3EJ9_E 3EJ7_K 3EJ3_I 3MB2_A ....
Probab=24.72 E-value=74 Score=19.90 Aligned_cols=26 Identities=19% Similarity=0.336 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCC
Q 028407 22 SAPREVAKAVARIIALALDLDADFFD 47 (209)
Q Consensus 22 ~~~~~la~~ll~~la~~Lgl~~~~~~ 47 (209)
++-.+++..|..++.+.||.+++.+.
T Consensus 14 e~K~~l~~~it~~~~~~lg~~~~~i~ 39 (60)
T PF01361_consen 14 EQKRELAEAITDAVVEVLGIPPERIS 39 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-GGGEE
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCeEE
Confidence 45678899999999999999987544
No 46
>TIGR00013 taut 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.
Probab=23.23 E-value=1.3e+02 Score=18.87 Aligned_cols=26 Identities=15% Similarity=0.216 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCC
Q 028407 22 SAPREVAKAVARIIALALDLDADFFD 47 (209)
Q Consensus 22 ~~~~~la~~ll~~la~~Lgl~~~~~~ 47 (209)
++-.+++..|.+++++.||.+++...
T Consensus 15 eqK~~l~~~it~~l~~~lg~~~~~v~ 40 (63)
T TIGR00013 15 EQKRQLIEGVTEAMAETLGANLESIV 40 (63)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccEE
Confidence 45577889999999999999987543
No 47
>PRK02220 4-oxalocrotonate tautomerase; Provisional
Probab=22.47 E-value=1.2e+02 Score=18.89 Aligned_cols=26 Identities=12% Similarity=0.167 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCC
Q 028407 22 SAPREVAKAVARIIALALDLDADFFD 47 (209)
Q Consensus 22 ~~~~~la~~ll~~la~~Lgl~~~~~~ 47 (209)
++-.+++..|.+++++.+|.+++...
T Consensus 15 eqk~~l~~~it~~l~~~~~~p~~~v~ 40 (61)
T PRK02220 15 EQLKALVKDVTAAVSKNTGAPAEHIH 40 (61)
T ss_pred HHHHHHHHHHHHHHHHHhCcChhhEE
Confidence 45678889999999999999876543
No 48
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=22.07 E-value=5.3e+02 Score=22.43 Aligned_cols=115 Identities=19% Similarity=0.209 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCccccCCccceeeeccccCCCCCCCCCcccccccCCCC------------ceeEEee-
Q 028407 26 EVAKAVARIIALALDLDADFFDKPEMLGQAIATLRLLHYEGQISDPSKGMYGAGAHSDYG------------LITLLAT- 92 (209)
Q Consensus 26 ~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~rl~~Yp~~~~~~~~~~~g~~~HtD~~------------~lTll~~- 92 (209)
.+...|.+.|+...+++.+..+ .+++.+|-+-. -..+|.|+. +.|+|+.
T Consensus 111 pvv~~I~~Ria~~t~lp~~~~E----------~lQVlrY~~Gq--------~Y~~H~D~~~~~~~~~~gg~R~aTvL~YL 172 (310)
T PLN00052 111 PVVSRIEERIAAWTFLPEENAE----------NIQILRYEHGQ--------KYEPHFDYFHDKINQALGGHRYATVLMYL 172 (310)
T ss_pred HHHHHHHHHHHHHhCCCcccCc----------ceEEEecCCCC--------CCCCCCCccccccccccCCceeEEEEEEe
Confidence 4556666666666677654333 37788887621 134566632 5777754
Q ss_pred -c-CCCceeEEecCCC-----CCC-------ceEEccCCCCcEEEechhHHHHHhCCe-eecccccccC-CCCCceEEEE
Q 028407 93 -D-EVAGLQICKDRDA-----KPQ-------LWEDVAPMKGAFIVNLGDMLERWSNCI-FKSTLHRVLG-TGRERYSIAF 156 (209)
Q Consensus 93 -d-~~~GLqV~~~~g~-----~~g-------~W~~v~~~~g~lvVn~Gd~l~~~TnG~-~~s~~HRV~~-~~~~R~Si~~ 156 (209)
| ..+|=-+...... ++. .=+.|.|..|..|+.-= ...||. =+.++|.+.+ -...++++..
T Consensus 173 ndv~~GGeT~FP~~~~~~~~~~~~~~s~c~~~gl~VkPkkG~ALlF~n----l~~dG~~D~~SlHagcPVi~G~Kw~atk 248 (310)
T PLN00052 173 STVDKGGETVFPNAEGWENQPKDDTFSECAHKGLAVKPVKGDAVLFFS----LHIDGVPDPLSLHGSCPVIEGEKWSAPK 248 (310)
T ss_pred ccCCCCCceecCCcccccccccccchhhhhcCCeEeccCcceEEEEec----cCCCCCCCcccccCCCeeecCeEEEEEE
Confidence 2 1223222221100 000 01678888887765322 112342 2557888874 3557898888
Q ss_pred ccCCCC
Q 028407 157 FVEPSH 162 (209)
Q Consensus 157 F~~p~~ 162 (209)
.++...
T Consensus 249 Wi~~~~ 254 (310)
T PLN00052 249 WIHIRS 254 (310)
T ss_pred eeeccc
Confidence 777643
No 49
>PF08066 PMC2NT: PMC2NT (NUC016) domain; InterPro: IPR012588 Exosomes are nano-compartments that function in the degradation or processing of RNA (including mRNA, rRNA, snRNA and snoRNA) [, ]. Exosomes occur in both archaea and eukaryotes, and have a similar overall structure to each other and to bacterial/organelle PNPases (polynucleotide phosphorylases; 2.7.7.8 from EC) [], consisting of a barrel structure composed of a hexameric ring of PH domains that act as a degradation chamber, and an S1-domain/KH-domain containing cap that binds the RNA substrate (and sometimes accessory proteins) in order to regulate and restrict entry into the degradation chamber []. There are two types of exosomes in eukaryotes, cytoplasmic exosomes that are responsible for 3'-5' exoribonuclease degradation of mRNAs, and nuclear exosomes that degrade pre-mRNAs (such as nonsense transcripts) and degrade rRNAs, snRNAs and snoRNAs. Unstructured RNA substrates feed in through the pore made by the S1 domains, are degraded by the PH domain ring, and exit as nucleotides via the PH pore at the opposite end of the barrel [, ]. There are several accessory proteins that help degrade, unwind or polyadenylate RNA substrate before they enter the exosome. This entry represents the N-terminal domain of Rrp6 (exosome component 10 in humans), a nuclear exosome accessory factor that interacts with the bottom of the hexameric PH-ring opposite the cap. Rrp6 functions as a hydrolytic exonuclease, and is homologous to RNase-D in Escherichia coli. More information about these proteins can be found at Protein of the Month: RNA Exosomes [].; GO: 0006396 RNA processing, 0000176 nuclear exosome (RNase complex)
Probab=20.92 E-value=1.3e+02 Score=20.91 Aligned_cols=29 Identities=7% Similarity=-0.113 Sum_probs=16.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 028407 11 HIFQVCLIYFVSAPREVAKAVARIIALAL 39 (209)
Q Consensus 11 ~~f~~~~~~y~~~~~~la~~ll~~la~~L 39 (209)
|+|+..+.+...++..+...|++.+...-
T Consensus 24 p~f~~~ld~~s~rll~l~n~ll~~~~~~~ 52 (91)
T PF08066_consen 24 PEFAESLDEQSQRLLSLINSLLKSAGSKS 52 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 55666666666666666665555554443
Done!