BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028409
(209 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O42929|DENR_SCHPO Translation machinery-associated protein 22 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=tma22 PE=3 SV=1
Length = 190
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 102/175 (58%), Gaps = 8/175 (4%)
Query: 5 PQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQ 64
P+ VLYC +C+LP EYCEF +KCK WL + P++Y L E + +S L+
Sbjct: 7 PKLKSVLYCDVCTLPVEYCEFEGTLKKCKEWLKSSHPDVYDKLYGEQD------LSKDLE 60
Query: 65 LFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGL 124
SG D ++ + +K + ++ + K+ +V+I+ + R KRK +T V+GL
Sbjct: 61 NTLNVSGTKD--SNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQGL 118
Query: 125 DLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAV 179
D FG++ A+K L KFATGASV K +K++I VQGD++YDI +FI + + V
Sbjct: 119 DAFGIETKKAAKMLANKFATGASVTKTADKKDEIVVQGDLNYDIFDFILEKFKEV 173
>sp|Q2TVZ2|DENR_ASPOR Translation machinery-associated protein 22 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=tma22 PE=3 SV=1
Length = 194
Score = 113 bits (282), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 97/171 (56%), Gaps = 10/171 (5%)
Query: 6 QPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQL 65
Q V+YC +C+LP EYCEFG +KC+ WL + PELY L E E +S L
Sbjct: 13 QARHVVYCGVCTLPPEYCEFGGTAKKCEEWLKEKQPELYQRLHSE------EAISANLST 66
Query: 66 FGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLD 125
+S+ + + + R ++K +V I++V RNKRK +T++ GL+
Sbjct: 67 LSISAQERAAKDAAKKEAKAALAEAR----DAERKAASKVQIKRVERNKRKHVTVIAGLE 122
Query: 126 LFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW 176
++G++ +K+LGKKFATG+SV + E+I VQGD+S D+ +++ + +
Sbjct: 123 VYGLENKKVAKELGKKFATGSSVTRSAAGNEEITVQGDVSDDVQDWLLEVY 173
>sp|Q6GLZ1|DENR_XENLA Density-regulated protein OS=Xenopus laevis GN=denr PE=2 SV=1
Length = 198
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 105/182 (57%), Gaps = 23/182 (12%)
Query: 7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDL-LKEANEKEAEKVSGQLQL 65
P++VLYC +CSLP EYCE+ PD KC+ WL KN P+++ L L ++E V GQ
Sbjct: 28 PLKVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPDVFAKLTLGHIPKQETGTVEGQ--- 84
Query: 66 FGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKER---QEVVIEKVVRNKRKCITIVK 122
ATSG+ K+ KR G+IK+K++ Q + I K+ R K+K +T V
Sbjct: 85 ----------ATSGEEEEKKK--QKRGGRGQIKQKKKTVPQRITIAKIPRAKKKYVTRVC 132
Query: 123 GLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVISL 182
GL F ++L DA + +KF+ GASV T +++I +QGD + DI++ I + WP V
Sbjct: 133 GLATFEIELKDAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDD 188
Query: 183 SI 184
SI
Sbjct: 189 SI 190
>sp|Q1E556|DENR_COCIM Translation machinery-associated protein 22 OS=Coccidioides immitis
(strain RS) GN=TMA22 PE=3 SV=1
Length = 200
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 99/171 (57%), Gaps = 10/171 (5%)
Query: 4 KPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQL 63
+PQ ++YC +CSLP EYCEFG +KC+ WL +N P ++ L E E ++ L
Sbjct: 15 EPQARHIVYCGVCSLPPEYCEFGGTAKKCEEWLHENNPSMHQKLYSE------ETIAANL 68
Query: 64 QLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKG 123
+ + + + ++ K+ + + ++K +V I++V RNKRK +T++ G
Sbjct: 69 STLSIQAR----ERAAKDAAKKEAKAALVETRNQERKAAAKVQIKRVERNKRKHVTVIAG 124
Query: 124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITD 174
L+ G+ +K+LGKKFATG+SV K P E+I VQGD+ D++E++ +
Sbjct: 125 LEAHGLDNKKVAKELGKKFATGSSVTKNPAGGEEITVQGDVCEDVLEWLVE 175
>sp|Q5RFP5|DENR_PONAB Density-regulated protein OS=Pongo abelii GN=DENR PE=2 SV=1
Length = 198
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 104/181 (57%), Gaps = 21/181 (11%)
Query: 7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLF 66
P+RVLYC +CSLP EYCE+ PD KC+ WL KN P + L E + K Q
Sbjct: 28 PLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPK---------QEA 78
Query: 67 GLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKER---QEVVIEKVVRNKRKCITIVKG 123
G+S G T+G+ K+ KR G+IK+K++ Q+V I K+ R K+K +T V G
Sbjct: 79 GISEG---QGTAGEEEEKKK--QKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCG 133
Query: 124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVISLS 183
L F + L +A + +KF+ GASV T +++I +QGD + DI++ I + WP V+ S
Sbjct: 134 LATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVVDDS 189
Query: 184 I 184
I
Sbjct: 190 I 190
>sp|A1C8E3|DENR_ASPCL Translation machinery-associated protein 22 OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=tma22 PE=3 SV=1
Length = 194
Score = 110 bits (274), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 98/183 (53%), Gaps = 17/183 (9%)
Query: 1 MAEKPQPV-------RVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANE 53
M E QP +++YC +C+LP EYCEFG +KC+ WL N E Y L E
Sbjct: 1 MGEIAQPAFFESKLKQIVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHEETYQRLYSE--- 57
Query: 54 KEAEKVSGQLQLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRN 113
E +S L +S + + + R ++K +V I++V RN
Sbjct: 58 ---EALSSNLSTLSVSVRERAAKDAAKKEAKAALAEAR----DAERKAAAKVQIKRVERN 110
Query: 114 KRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFIT 173
KRK +T++ GL++ G++ +K+LGKKFATG+SV K P E+I VQGD+S D+ E++
Sbjct: 111 KRKHVTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVQEWLL 170
Query: 174 DTW 176
+ +
Sbjct: 171 EVY 173
>sp|Q6DFN7|DENR_XENTR Density-regulated protein OS=Xenopus tropicalis GN=denr PE=2 SV=1
Length = 200
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 103/184 (55%), Gaps = 27/184 (14%)
Query: 7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLF 66
P++VLYC +CSLP EYCE+ PD KC+ WL KN P+ + L
Sbjct: 30 PLKVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPDEFSKL-----------------TL 72
Query: 67 GLSSGGADGATSGQTSSS---KQEEVKRLPGGKIKKKER---QEVVIEKVVRNKRKCITI 120
G+S G GQ +S ++++ KR G+IK+K++ Q+V I K+ R K+K +T
Sbjct: 73 GISPKQETGTVEGQATSGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTR 132
Query: 121 VKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVI 180
V GL F ++L DA + +KF+ GASV T +++I +QGD + DI++ I + WP V
Sbjct: 133 VCGLATFEIELKDAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVD 188
Query: 181 SLSI 184
SI
Sbjct: 189 DDSI 192
>sp|Q9P3T4|DENR_NEUCR Translation machinery-associated protein 22 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=tma-22 PE=3 SV=1
Length = 187
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 94/171 (54%), Gaps = 12/171 (7%)
Query: 10 VLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLK-EANEKEAEKVSGQLQLFGL 68
V+YC +CSLP EYCE+G +KC+ WL KN P +Y + E E E +S + Q +
Sbjct: 9 VVYCGVCSLPPEYCEYGGTVKKCQQWLEKNQPTMYSRIWSPEVLEAEMASLSVEAQERAM 68
Query: 69 SSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLDLFG 128
A + + + K+ V I+++ RNKRK +T V GL+ FG
Sbjct: 69 KDAKKKAAKAEAAEQKQAD-----------KRANSVVTIKRIERNKRKYVTSVSGLEAFG 117
Query: 129 VKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAV 179
++L +K GKKFATG+SV K P+ E+I VQGD+S +I EFI + + V
Sbjct: 118 LELKKVAKDFGKKFATGSSVTKVPSGGEEIVVQGDVSGEIEEFILEKYKEV 168
>sp|Q4WBL6|DENR_ASPFU Translation machinery-associated protein 22 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=tma22 PE=3 SV=2
Length = 194
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 94/171 (54%), Gaps = 10/171 (5%)
Query: 6 QPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQL 65
Q +V+YC +C+LP EYCEFG +KC+ WL N ELY L E E +S L
Sbjct: 13 QAKKVVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHAELYQRLYSE------EALSSNLSE 66
Query: 66 FGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLD 125
+S + + + R K K V I++V RNKRK +T++ GL+
Sbjct: 67 LSVSVRERAAKDAAKKEAKAAAAEARDAERKAAAK----VQIKRVERNKRKHVTVITGLE 122
Query: 126 LFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW 176
+ G++ +K+LGKKFATG+SV K P E+I VQGD+S D+ E++ + +
Sbjct: 123 VHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVKEWLLELY 173
>sp|Q2HJ47|DENR_BOVIN Density-regulated protein OS=Bos taurus GN=DENR PE=2 SV=1
Length = 198
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 103/181 (56%), Gaps = 21/181 (11%)
Query: 7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLF 66
P+RVLYC +CSLP EYCE+ PD KC+ WL KN P + L E + K Q
Sbjct: 28 PLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPK---------QEA 78
Query: 67 GLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKER---QEVVIEKVVRNKRKCITIVKG 123
G+S G T+G+ K+ KR G+IK+K++ Q+V I K+ R K+K +T V G
Sbjct: 79 GISEG---QGTAGEEEEKKK--QKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCG 133
Query: 124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVISLS 183
L F + L +A + +KF+ GASV T +++I +QGD + DI++ I + WP V S
Sbjct: 134 LATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDS 189
Query: 184 I 184
I
Sbjct: 190 I 190
>sp|A2QHG9|DENR_ASPNC Translation machinery-associated protein 22 OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=tma22 PE=3 SV=1
Length = 197
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 98/183 (53%), Gaps = 17/183 (9%)
Query: 1 MAEKPQPV-------RVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANE 53
MAE QPV V+YC +C+LP EYCEFG +KC+ WL P++Y L E
Sbjct: 1 MAEVAQPVPAESQAKHVVYCGVCTLPPEYCEFGGTAKKCEEWLKDAHPDMYQSLYSE--- 57
Query: 54 KEAEKVSGQLQLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRN 113
E ++ L +S+ + + + R K K V I++V RN
Sbjct: 58 ---EALNSNLATLSVSARERAAKDAAKKEAKAAAAEARDAERKAASK----VQIKRVERN 110
Query: 114 KRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFIT 173
KRK +T++ GLD++G++ +K LGKKFATG+S+ + E+I VQGD+S D+ E++
Sbjct: 111 KRKHVTVITGLDIYGLENKKIAKDLGKKFATGSSMTRSAGGTEEITVQGDVSDDVKEWLL 170
Query: 174 DTW 176
+ +
Sbjct: 171 EVY 173
>sp|O43583|DENR_HUMAN Density-regulated protein OS=Homo sapiens GN=DENR PE=1 SV=2
Length = 198
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 103/181 (56%), Gaps = 21/181 (11%)
Query: 7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLF 66
P+RVLYC +CSLP EYCE+ PD KC+ WL KN P + L E + K Q
Sbjct: 28 PLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPK---------QEA 78
Query: 67 GLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKER---QEVVIEKVVRNKRKCITIVKG 123
G+S G T+G+ K+ KR G+IK+K++ Q+V I K+ R K+K +T V G
Sbjct: 79 GISEG---QGTAGEEEEKKK--QKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCG 133
Query: 124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVISLS 183
L F + L +A + +KF+ GASV T +++I +QGD + DI++ I + WP V S
Sbjct: 134 LATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDS 189
Query: 184 I 184
I
Sbjct: 190 I 190
>sp|A1DAY1|DENR_NEOFI Translation machinery-associated protein 22 OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=tma22 PE=3 SV=1
Length = 194
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 94/171 (54%), Gaps = 10/171 (5%)
Query: 6 QPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQL 65
Q +V+YC +C+LP EYCEFG +KC+ WL N +LY L E E +S L
Sbjct: 13 QAKQVVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHADLYQRLYSE------EALSSNLSE 66
Query: 66 FGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLD 125
+S + + + R K K V I++V RNKRK +T++ GL+
Sbjct: 67 LSVSVRERAAKDAAKKEAKAAAAEARDAERKAAAK----VQIKRVERNKRKHVTVITGLE 122
Query: 126 LFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW 176
+ G++ +K+LGKKFATG+SV K P E+I VQGD+S D+ E++ + +
Sbjct: 123 VHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVQEWLLELY 173
>sp|Q5ZJ39|DENR_CHICK Density-regulated protein OS=Gallus gallus GN=DENR PE=2 SV=1
Length = 198
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 102/181 (56%), Gaps = 21/181 (11%)
Query: 7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLF 66
P+RVLYC +CSLP EYCE+ PD KC+ WL KN P+ + L E + K+ V
Sbjct: 28 PLRVLYCGVCSLPTEYCEYMPDVTKCRQWLEKNFPDEFAKLTVENSPKQEAGV------- 80
Query: 67 GLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKER---QEVVIEKVVRNKRKCITIVKG 123
G T+G+ K+ KR G+IK+K++ Q+V I K+ R K+K +T V G
Sbjct: 81 -----GEGQGTAGEEEEKKK--QKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCG 133
Query: 124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVISLS 183
L F + L +A + +KF+ GASV T +++I +QGD + DI++ I + WP V S
Sbjct: 134 LATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDS 189
Query: 184 I 184
I
Sbjct: 190 I 190
>sp|Q9CQJ6|DENR_MOUSE Density-regulated protein OS=Mus musculus GN=Denr PE=2 SV=1
Length = 198
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 96/181 (53%), Gaps = 21/181 (11%)
Query: 7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLF 66
P+RVLYC +CSLP EYCE+ PD KC+ WL KN P + L E + K+ ++
Sbjct: 28 PLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQETGITEGQGPV 87
Query: 67 GLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKER---QEVVIEKVVRNKRKCITIVKG 123
G G+ G+IK+K++ Q+V I K+ R K+K +T V G
Sbjct: 88 GEEEEKKKQKRGGR--------------GQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCG 133
Query: 124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVISLS 183
L F + L +A + +KF+ GASV T +++I +QGD + DI++ I + WP V S
Sbjct: 134 LATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDS 189
Query: 184 I 184
I
Sbjct: 190 I 190
>sp|A5DGV3|DENR_PICGU Translation machinery-associated protein 22 OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=TMA22 PE=3 SV=1
Length = 201
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 90/177 (50%), Gaps = 30/177 (16%)
Query: 6 QPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQL 65
+P VLYC +CS P E+CEFG F++CK WL +N ELY L
Sbjct: 5 EPKSVLYCGVCSFPPEFCEFGGSFKRCKEWLEQNDKELYEKLY----------------- 47
Query: 66 FGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQE----------VVIEKVVRNKR 115
S ATS + +Q+ K L + K++ +QE V I+++ RNKR
Sbjct: 48 ---SEDALANATSTLSIDKEQKIAKELEKKQAKEEAKQERELKKQLASKVTIKRIERNKR 104
Query: 116 KCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 172
K + + GL++F + + SK KFATGASV K +K++I VQGD+S + +I
Sbjct: 105 KHVIAISGLEVFDIDMKKLSKTFASKFATGASVTKNAEKKDEIIVQGDVSDEARAYI 161
>sp|Q6BH22|DENR_DEBHA Translation machinery-associated protein 22 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=TMA22 PE=3 SV=1
Length = 189
Score = 105 bits (261), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 92/166 (55%), Gaps = 10/166 (6%)
Query: 7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLF 66
P + YC +C+ P EYCEFG F++CK WL +N PEL+ L A+ ++
Sbjct: 6 PKNIEYCEVCTFPPEYCEFGLSFKRCKEWLQENQPELFEKLYS------ADALANATSTL 59
Query: 67 GLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLDL 126
L + + ++ +++R +++KK +V I+++ RNKRK + + GL++
Sbjct: 60 SLEKEQKISQEMEKKQAKEEAKLER----ELQKKLSSKVTIKRIERNKRKHVISISGLEV 115
Query: 127 FGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 172
F + + +K KFATGASV K +K++I VQGD+S + ++I
Sbjct: 116 FNIDMKKLAKTFASKFATGASVTKNAEKKDEIIVQGDVSDEAKDYI 161
>sp|Q6CA08|DENR_YARLI Translation machinery-associated protein 22 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=TMA22 PE=3 SV=1
Length = 188
Score = 105 bits (261), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 91/167 (54%), Gaps = 8/167 (4%)
Query: 7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLF 66
P VLYC +C+LP EYCEFG F++CK WL N EL+ L E ++ +Q
Sbjct: 6 PRTVLYCGVCTLPPEYCEFGGAFKRCKAWLEDNDQELFAQLYS------VEALTNAVQAS 59
Query: 67 GLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLDL 126
+S+ + +++E K ++ KK +VVI+++ R+KRK I V GL++
Sbjct: 60 SISAEKQEEIDRKLQKQQQKDEAK--AERELLKKLASKVVIKRIERSKRKRIISVSGLEV 117
Query: 127 FGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFIT 173
F + L SK KFATGASV K KE+I +QGD+ + E IT
Sbjct: 118 FELDLKKLSKTFSSKFATGASVTKTADGKEEIVIQGDVGDGVEELIT 164
>sp|Q2H5Z7|DENR_CHAGB Translation machinery-associated protein 22 OS=Chaetomium globosum
(strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 /
NRRL 1970) GN=TMA22 PE=3 SV=1
Length = 188
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 102/179 (56%), Gaps = 15/179 (8%)
Query: 1 MAEKPQPV--RVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLK-EANEKEAE 57
MAE P PV ++YC +C+LP EYCE+G +KC+ WL K P+LY + EA E
Sbjct: 1 MAE-PTPVGREIIYCGVCTLPPEYCEYGGTTKKCQEWLEKKHPDLYARIWSPEALEAATA 59
Query: 58 KVSGQLQLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKC 117
+S Q + + + +++Q+ +L + V I+++ RNKRK
Sbjct: 60 SLSLAAQE---RAAKDAAKKAAKAEAAEQKHADKLA--------KSVVTIKRIERNKRKF 108
Query: 118 ITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW 176
+T V GL+ FG++L +K GKKFATGASV K P+ E+I VQGD+S +I EF+ + +
Sbjct: 109 VTSVTGLEAFGLELKKVAKDFGKKFATGASVTKVPSGGEEIVVQGDVSGEIEEFLLEKY 167
>sp|Q6CJ30|DENR_KLULA Translation machinery-associated protein 22 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=TMA22 PE=3 SV=1
Length = 200
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 20/170 (11%)
Query: 10 VLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLFGLS 69
V+YC +C PAEYCEF F++CK WL +N PELY + E VS QL
Sbjct: 6 VIYCGVCDFPAEYCEFSGKFKRCKAWLQENHPELYTKWYGDVTED----VSKQL------ 55
Query: 70 SGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQ-------EVVIEKVVRNKRKCITIVK 122
A+ + + ++ +++L + ++ER+ +VVI + R KRKC+ +
Sbjct: 56 ---AESSIGDEREEKLEKALEKLERKQQAREERELAKKLSSKVVIRREARTKRKCMIAIS 112
Query: 123 GLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 172
GL++F + + SK KFATG S+ K +KE++ VQGD++ ++ +I
Sbjct: 113 GLEVFEIDMKKLSKTFASKFATGCSISKNAEKKEEVIVQGDLADEVEAYI 162
>sp|A4QVI3|DENR_MAGO7 Translation machinery-associated protein 22 OS=Magnaporthe oryzae
(strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=TMA22 PE=3
SV=2
Length = 201
Score = 103 bits (257), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 96/177 (54%), Gaps = 12/177 (6%)
Query: 4 KPQPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLK-EANEKEAEKVSGQ 62
+PQ V YC +CSLP EYCE+G +KC+ WL +N E+Y + EA + +S +
Sbjct: 13 EPQGREVTYCGVCSLPPEYCEYGGTVKKCQDWLQRNNQEMYDRIWSPEALQAATAALSVE 72
Query: 63 LQLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVK 122
Q A + + +++K+ V ++++ RNKRK +T V
Sbjct: 73 AQQRAEKDAKKKAAKAEAAEAKHADKLKK-----------SVVTVKRIERNKRKYVTSVS 121
Query: 123 GLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAV 179
GL+ FG++L +K GKKFATG+SV K + E+I VQGD+S +I EFI + + V
Sbjct: 122 GLESFGLELKKVAKDFGKKFATGSSVTKVASGGEEIVVQGDVSDEIKEFIVEKYKDV 178
>sp|Q6DH65|DENR_DANRE Density-regulated protein OS=Danio rerio GN=denr PE=1 SV=1
Length = 208
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 104/181 (57%), Gaps = 9/181 (4%)
Query: 7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLF 66
P++VLYC +CSLPAEYCE+ P+ KCK WL KN P+++ L K+ K G +
Sbjct: 26 PLKVLYCGVCSLPAEYCEYMPEPAKCKQWLEKNFPDVFAKLTLGTAPKQESKGGGGGEDG 85
Query: 67 GLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKER---QEVVIEKVVRNKRKCITIVKG 123
G G ++++ KR G+IK+K++ Q+V I K+ R K+K +T V G
Sbjct: 86 GGGRGRG--EAPPAGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCG 143
Query: 124 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVISLS 183
L F ++L +A + +KF+ GASV T +++I +QGD + DI++ I + WP V S
Sbjct: 144 LATFDIELKEAQRFFAQKFSCGASV----TAEDEIIIQGDFTDDIIDVIQEKWPEVDDDS 199
Query: 184 I 184
I
Sbjct: 200 I 200
>sp|A5E3R9|DENR_LODEL Translation machinery-associated protein 22 OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=TMA22 PE=3 SV=1
Length = 196
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 98/174 (56%), Gaps = 9/174 (5%)
Query: 7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPEL----YPDLLK----EANEKEAEK 58
P ++ YC +C+ P E+CEFG +C+ WL PEL YP+ A+ A++
Sbjct: 6 PKQITYCGVCTWPLEFCEFGISLPRCQSWLASKHPELFSTVYPNTPNPESVSASAPSADE 65
Query: 59 VSGQLQLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCI 118
++ +L+L LSS + + KQ + + ++ KK+ +++I+++ RNKRK I
Sbjct: 66 LASKLELATLSSDPKEAKIQAELLK-KQAKHQLKQEKELTKKQNSKIIIKRIERNKRKHI 124
Query: 119 TIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 172
+ GL++F ++ +K KFATGASVVK + +++ VQGD+S + E+I
Sbjct: 125 ISISGLEVFQIEPKKLAKTFASKFATGASVVKNAEKLDEVVVQGDVSDEAKEYI 178
>sp|A6SIZ0|DENR_BOTFB Translation machinery-associated protein 22 OS=Botryotinia
fuckeliana (strain B05.10) GN=tma22 PE=3 SV=1
Length = 197
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 94/182 (51%), Gaps = 12/182 (6%)
Query: 6 QPVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKE-ANEKEAEKVSGQLQ 64
Q V+YC +CSLP EYCE+G +KC+ WL K P +Y L E A +S Q
Sbjct: 14 QSRHVVYCGVCSLPPEYCEYGGTVKKCQEWLEKKYPSMYERLWSEDALAAATSTLSVDAQ 73
Query: 65 LFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGL 124
A + + + E L KI+ I++V RNKRK +T V+GL
Sbjct: 74 KRAAKDATKKAAKAEALEAKQNE---TLASSKIR--------IKRVERNKRKYVTEVQGL 122
Query: 125 DLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVISLSI 184
+ FG++L +K+ G +FATG+SV K + ++I VQGD+S D+ EF+ + + +I
Sbjct: 123 EAFGLELKKVAKEFGSRFATGSSVTKVASGGQEITVQGDVSDDVREFLIKNYKNIPKKNI 182
Query: 185 FF 186
Sbjct: 183 VL 184
>sp|A3LSY0|DENR_PICST Translation machinery-associated protein 22 OS=Scheffersomyces
stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 /
NRRL Y-11545) GN=TMA22 PE=3 SV=1
Length = 195
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 38/177 (21%)
Query: 10 VLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLFGLS 69
V YC +CS P EYCEFG ++CK WL N EL+ +
Sbjct: 9 VYYCGVCSFPPEYCEFGVSLKRCKDWLQDNNQELFDKIY--------------------- 47
Query: 70 SGGADGATSGQTSS---SKQEEV-KRLPGGKIKKKERQE----------VVIEKVVRNKR 115
+D A + QTS+ +QE++ + L ++K++ +QE V+I+++ RN+R
Sbjct: 48 ---SDDALATQTSTLSIERQEKISQELAKKQLKEEAKQERELQKKLASKVLIKRIERNRR 104
Query: 116 KCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 172
K I + GL++F + + +K KFATGASV K +KE+I VQGD+S + E+I
Sbjct: 105 KHIISISGLEVFNIDMKKLAKTFASKFATGASVTKTADKKEEILVQGDVSDEAKEYI 161
>sp|Q75CN1|DENR_ASHGO Translation machinery-associated protein 22 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=TMA22 PE=3 SV=1
Length = 199
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 17/171 (9%)
Query: 9 RVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLFGL 68
+V+YC +CSLP EYCEF +CK WL ++ EL+ L + + E V G G
Sbjct: 4 KVVYCGVCSLPPEYCEFTGKIRRCKVWLHEHDQELFAQLYGD----DKEDVDGVAARLGQ 59
Query: 69 SSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQ-------EVVIEKVVRNKRKCITIV 121
SS G + ++++++L + K++R+ VVI + R KRKC+ +V
Sbjct: 60 SSIGEE------REEQLEKKLQKLQAREESKEQRELARKLSSRVVIRREARTKRKCMVVV 113
Query: 122 KGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 172
GL++F + + +K KFATG SV K +KE++ VQGDI+ ++ +I
Sbjct: 114 AGLEVFEIDMKKLAKTFASKFATGCSVSKNVEKKEEVVVQGDIADEVEAYI 164
>sp|P0CR80|DENR_CRYNJ Translation machinery-associated protein 22 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=TMA22 PE=3 SV=1
Length = 198
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 93/176 (52%), Gaps = 32/176 (18%)
Query: 8 VRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLFG 67
V YC++CSLP EYCEFGP KCK WL +E ++ E E+V G+
Sbjct: 13 VHPFYCAVCSLPTEYCEFGPSVSKCKAWL------------EEQDKDEYERVWGE----- 55
Query: 68 LSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKE-----------RQEVVIEKVVRNKRK 116
GA + G S KQE+++ KK + +++I++ R KRK
Sbjct: 56 ----GALASRIGTLSLDKQEKLEADAAKLEKKAAKKAEAEAKKKEQTKIIIKRSERTKRK 111
Query: 117 CITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 172
T ++ L+LFGV L A+K+ KFATG+SV K P +E+I +QGD+ +IVE I
Sbjct: 112 HQTHIQNLELFGVDLKKAAKQFAGKFATGSSVSKTPQGEEEIVIQGDVGDEIVEMI 167
>sp|P0CR81|DENR_CRYNB Translation machinery-associated protein 22 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=TMA22 PE=3 SV=1
Length = 198
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 93/176 (52%), Gaps = 32/176 (18%)
Query: 8 VRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLFG 67
V YC++CSLP EYCEFGP KCK WL +E ++ E E+V G+
Sbjct: 13 VHPFYCAVCSLPTEYCEFGPSVSKCKAWL------------EEQDKDEYERVWGE----- 55
Query: 68 LSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKE-----------RQEVVIEKVVRNKRK 116
GA + G S KQE+++ KK + +++I++ R KRK
Sbjct: 56 ----GALASRIGTLSLDKQEKLEADAAKLEKKAAKKAEAEAKKKEQTKIIIKRSERTKRK 111
Query: 117 CITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 172
T ++ L+LFGV L A+K+ KFATG+SV K P +E+I +QGD+ +IVE I
Sbjct: 112 HQTHIQNLELFGVDLKKAAKQFAGKFATGSSVSKTPQGEEEIVIQGDVGDEIVEMI 167
>sp|P47089|DENR_YEAST Translation machinery-associated protein 22 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TMA22 PE=1
SV=1
Length = 198
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 88/164 (53%), Gaps = 3/164 (1%)
Query: 10 VLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLL-KEANEKEAEKVSGQLQLFGL 68
V+YC ICS P EYCEF ++CK WL +N +LY L + N +E E V+ +L +
Sbjct: 5 VIYCGICSYPPEYCEFSGKLKRCKVWLSENHADLYAKLYGTDDNTQEVEAVTNKLAESSI 64
Query: 69 SSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLDLFG 128
+ K++E + ++ KK +V+I++ R KRK I + GL++F
Sbjct: 65 GEAREEKLEKDLLKIQKKQENR--EQRELAKKLSSKVIIKREARTKRKFIVAISGLEVFD 122
Query: 129 VKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 172
+ + +K +FATG SV K +KE++ +QGD+ ++ +I
Sbjct: 123 IDMKKLAKTFASRFATGCSVSKNAEKKEEVVIQGDVMDEVETYI 166
>sp|A6ZPY2|DENR_YEAS7 Translation machinery-associated protein 22 OS=Saccharomyces
cerevisiae (strain YJM789) GN=TMA22 PE=3 SV=1
Length = 198
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 88/164 (53%), Gaps = 3/164 (1%)
Query: 10 VLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLL-KEANEKEAEKVSGQLQLFGL 68
V+YC ICS P EYCEF ++CK WL +N +LY L + N +E E V+ +L +
Sbjct: 5 VIYCGICSYPPEYCEFSGKLKRCKVWLSENHADLYAKLYGTDDNTQEVEAVTNKLAESSI 64
Query: 69 SSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLDLFG 128
+ K++E + ++ KK +V+I++ R KRK I + GL++F
Sbjct: 65 GEAREEKLEKDLLKIQKKQENR--EQRELAKKLSSKVIIKREARTKRKFIVAISGLEVFD 122
Query: 129 VKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 172
+ + +K +FATG SV K +KE++ +QGD+ ++ +I
Sbjct: 123 IDMKKLAKTFASRFATGCSVSKNAEKKEEVVIQGDVMDEVETYI 166
>sp|A7TES6|DENR_VANPO Translation machinery-associated protein 22 OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=TMA22 PE=3
SV=1
Length = 206
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
Query: 10 VLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLFGLS 69
V+YC ICS P EYCEF ++CK WL +N ELY L NE + E + +L S
Sbjct: 5 VVYCGICSYPPEYCEFSGKLKRCKVWLSENDTELYAKLY--GNEIDEEVANAANKLGSSS 62
Query: 70 SGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLDLFGV 129
G A + Q + + ++ KK +VVI++ R KRK I + GL++F +
Sbjct: 63 IGEAREEKLEKDLLRLQAKQENREQRELAKKLSSKVVIKREARTKRKFIVAISGLEVFEI 122
Query: 130 KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 172
+ +K KFATG SV K +K++I +QGD+ ++ ++I
Sbjct: 123 DMKKLAKTFASKFATGCSVSKNAEKKDEIVIQGDVLEEVEKYI 165
>sp|Q54WG0|DENR_DICDI Density-regulated protein homolog OS=Dictyostelium discoideum
GN=denr PE=3 SV=1
Length = 224
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 103/209 (49%), Gaps = 33/209 (15%)
Query: 6 QPVRVL-YCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQ 64
QP+ V+ YC ICSLP EYCE+GP ++C L +N P +P+ K + +
Sbjct: 11 QPIVVVEYCKICSLPTEYCEYGPSAKQC---LKENGP--HPNNNKNTASGKDSSNTTATT 65
Query: 65 LFGLSSGGADGATSGQTSSSKQ-------EEVKRLPGGKIKKKERQ-------------- 103
++ +T K +EV + GK + KE
Sbjct: 66 TTTDTTTTTTTSTENTEEKLKDLKIVDDSKEVSHVDAGKSESKEATGEEKEKEKVSKKKK 125
Query: 104 ----EVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPT--EKEQ 157
+++IE RNKRK +T + GL+L+G+KLSDA+K + KKF+ G SVVK + E
Sbjct: 126 EVKPQIIIEVNQRNKRKHVTKITGLELYGIKLSDAAKVMAKKFSCGCSVVKSISNPNSED 185
Query: 158 IDVQGDISYDIVEFITDTWPAVISLSIFF 186
ID+QGD ++V+ I + +P V I+F
Sbjct: 186 IDIQGDFGEELVDLIEEKYPTVPLSEIYF 214
>sp|Q6FXQ4|DENR_CANGA Translation machinery-associated protein 22 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=TMA22 PE=3 SV=1
Length = 196
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 35/179 (19%)
Query: 10 VLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEAN----------------E 53
V+YC +C+ P +YCEF ++CK WL +N +LY L E + E
Sbjct: 5 VVYCGVCTYPIDYCEFSGKLKRCKVWLKENHADLYDKLYSEDDAAAASLSAKLAESSIGE 64
Query: 54 KEAEKVSGQLQLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRN 113
EK+ LQ + Q + ++E K+L +V++++ R
Sbjct: 65 AREEKLEKDLQKL----------QTKQENKEQRELAKKLSS---------KVIVKREART 105
Query: 114 KRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 172
KRK I + GL++F + + +K KFATG SV K +KE++ VQGD+ ++V +I
Sbjct: 106 KRKYIVAISGLEVFEIDMKKLAKTFASKFATGCSVSKNAEKKEEVVVQGDVLDEVVAYI 164
>sp|Q9NAH4|DENR_CAEEL Density-regulated protein homolog OS=Caenorhabditis elegans
GN=Y47D3A.21 PE=3 SV=1
Length = 192
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 93/178 (52%), Gaps = 16/178 (8%)
Query: 7 PVRVLYCSICSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEANEKEAEKVSGQLQLF 66
P++++YC CS+P EYC++ + C+ W +NAPEL L E +++ A + +
Sbjct: 23 PLKMVYCGQCSMPPEYCDYSGQTDVCRAWATQNAPELLEGL--EISDEPAADGDEKKKQK 80
Query: 67 GLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRKCITIVKGLDL 126
G GA + Q ++S ++ P Q+V +++ R K K +T++KGL
Sbjct: 81 RGGKGSKTGAAAAQAAASGGKKKGGGP---------QKVTLQREPRGK-KSVTVIKGLAT 130
Query: 127 FGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPAVISLSI 184
F + L ASK +KFA G+SV T ++I +QGD+ D+++ I + W V I
Sbjct: 131 FDIDLKVASKLFAQKFACGSSV----TGADEIVIQGDVKDDLLDLIPEKWKQVTDEQI 184
>sp|Q5UZP9|SUI1_HALMA Protein translation factor SUI1 homolog OS=Haloarcula marismortui
(strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
GN=sui1 PE=3 SV=1
Length = 97
Score = 38.5 bits (88), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 100 KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQID 159
KE QE+ I R K +TI++G D V + S L KFA G +V G QI+
Sbjct: 22 KESQEINIRIDERRYGKEVTIIEGFDPKDVDMDSLSSDLKSKFACGGTVEDG-----QIE 76
Query: 160 VQGDISYDIVEFITD 174
+QG+ + + +F+ D
Sbjct: 77 LQGNHTGRVEDFLRD 91
>sp|B6YSM1|SUI1_THEON Protein translation factor SUI1 homolog OS=Thermococcus onnurineus
(strain NA1) GN=TON_0074 PE=3 SV=1
Length = 98
Score = 37.0 bits (84), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 97 IKKKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKE 156
+K+++R V IEK K K TI++G+D L D +KKL K A G +V KG
Sbjct: 17 LKEQQRIRVYIEKARYGKLK--TIIEGIDEKEFDLEDIAKKLKAKLACGGTVKKG----- 69
Query: 157 QIDVQGDISYDIVEFITD 174
+I++QGD + + + D
Sbjct: 70 RIELQGDHREKVKKLLAD 87
>sp|C5A278|SUI1_THEGJ Protein translation factor SUI1 homolog OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1995 PE=3 SV=1
Length = 98
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 97 IKKKERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKE 156
+K+++R V IE+ K K TI++G+D L D +KKL K A G +V KG
Sbjct: 17 LKEQQRIRVYIERARYGKLK--TIIEGIDEKEFDLEDIAKKLKAKLACGGTVKKG----- 69
Query: 157 QIDVQGDISYDIVEFITD 174
+I++QGD I + + D
Sbjct: 70 RIELQGDHRDRIKKLLAD 87
>sp|Q9HME3|SUI1_HALSA Protein translation factor SUI1 homolog OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=VNG_2584C
PE=3 SV=1
Length = 97
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 100 KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQID 159
KE Q++ I R K +T+++G D V L S L KFA G +V G +I+
Sbjct: 22 KESQQIEIRIDERRYGKEVTVIEGFDPKDVDLDSLSSDLKSKFACGGTVEDG-----EIE 76
Query: 160 VQGDISYDIVEFITD 174
+QG+ S + +F+ +
Sbjct: 77 LQGNHSGRVEDFLRN 91
>sp|B0R868|SUI1_HALS3 Protein translation factor SUI1 homolog OS=Halobacterium salinarum
(strain ATCC 29341 / DSM 671 / R1) GN=OE_4626R PE=3 SV=1
Length = 97
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 100 KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQID 159
KE Q++ I R K +T+++G D V L S L KFA G +V G +I+
Sbjct: 22 KESQQIEIRIDERRYGKEVTVIEGFDPKDVDLDSLSSDLKSKFACGGTVEDG-----EIE 76
Query: 160 VQGDISYDIVEFITD 174
+QG+ S + +F+ +
Sbjct: 77 LQGNHSGRVEDFLRN 91
>sp|Q2NFW4|SUI1_METST Protein translation factor SUI1 homolog OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0901 PE=3 SV=1
Length = 101
Score = 34.7 bits (78), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 100 KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQID 159
+E Q+V + V R K +TIV+G+D + + + +K L K A G G ++K QI+
Sbjct: 21 REVQKVKVYTVRRRFGKLMTIVEGIDEHDIDIRELTKTLKSKCACG-----GTSKKGQIE 75
Query: 160 VQGDISYDIVEFI 172
+QGD + E +
Sbjct: 76 LQGDHKRKVKEVL 88
>sp|A3CX23|SUI1_METMJ Protein translation factor SUI1 homolog OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_1997 PE=3 SV=1
Length = 101
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 100 KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQID 159
KE+Q + ++ R K +T+++GLD + + L D SK L K A G +V + I+
Sbjct: 23 KEQQRISVKINRRRYGKEVTVIEGLDPYDIDLEDLSKFLKAKLACGGTV-----KDSSIE 77
Query: 160 VQGD 163
+QG+
Sbjct: 78 LQGN 81
>sp|A8AC05|SUI1_IGNH4 Protein translation factor SUI1 homolog OS=Ignicoccus hospitalis
(strain KIN4/I / DSM 18386 / JCM 14125) GN=Igni_1281
PE=3 SV=1
Length = 104
Score = 34.3 bits (77), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 118 ITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGD 163
+TI++GL+L +L +K+L K ATG +V G +I++QGD
Sbjct: 41 VTIIEGLNLDNERLKKVAKQLKSKLATGGTVKNG-----RIELQGD 81
>sp|O88286|WIZ_MOUSE Protein Wiz OS=Mus musculus GN=Wiz PE=1 SV=2
Length = 1684
Score = 34.3 bits (77), Expect = 0.68, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 61 GQLQLFGLSSGGADGATSGQTSSSKQEEVKRLPGGKIKKKERQEVVIEKVVRNKRK 116
G L L G S+GG G +G+ + S + + P G +K +E Q I K R + +
Sbjct: 1519 GGLSLVGRSAGGEPGLEAGRAADSGERPLATSPPGTVKSEEHQRQNINKFERRQAR 1574
>sp|A2BIX0|SUI1_HYPBU Protein translation factor SUI1 homolog OS=Hyperthermus butylicus
(strain DSM 5456 / JCM 9403) GN=Hbut_0053 PE=3 SV=1
Length = 103
Score = 33.9 bits (76), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 100 KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQID 159
+E+Q + I+ R + +TI++GLD V L + +L + ATG + G +I+
Sbjct: 22 REQQIIKIKLEKRRYGREVTIIEGLDEREVNLKKLASELKSRLATGGTYKNG-----RIE 76
Query: 160 VQGDISYDIVEFITD 174
+QGD + + E + +
Sbjct: 77 LQGDHRHRVKEILVE 91
>sp|A2SQ91|SUI1_METLZ Protein translation factor SUI1 homolog OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0321 PE=3 SV=1
Length = 101
Score = 33.9 bits (76), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 100 KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQID 159
KE+Q + ++ R K +T+V GLD + + L D SK L + A G +V ++ I+
Sbjct: 23 KEQQRISVKVSKRRYGKEVTVVDGLDPYEIDLEDLSKFLKGRLACGGTV-----KENSIE 77
Query: 160 VQGDISYDIVEFIT 173
+QG+ + +T
Sbjct: 78 LQGNHRDRVKALLT 91
>sp|Q3IU96|SUI1_NATPD Protein translation factor SUI1 homolog OS=Natronomonas pharaonis
(strain DSM 2160 / ATCC 35678) GN=NP_0388A PE=3 SV=1
Length = 97
Score = 33.9 bits (76), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 100 KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTE 154
KE QE+ I R K +T+++G D V L S L KFA G +V G E
Sbjct: 22 KESQEINIRIDERRYGKEVTVIEGFDPQDVDLDSLSSDLKSKFACGGTVEDGSIE 76
>sp|Q46F27|SUI1_METBF Protein translation factor SUI1 homolog OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=Mbar_A0534 PE=3 SV=1
Length = 102
Score = 33.5 bits (75), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 100 KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQID 159
KE+Q + ++ R K +T+V+G D + L + S L KFA G + VKG T ++
Sbjct: 23 KEQQRITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGT-VKGNT----VE 77
Query: 160 VQGD 163
+QG+
Sbjct: 78 LQGN 81
>sp|Q8TIT3|SUI1_METAC Protein translation factor SUI1 homolog OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=MA_4059 PE=3 SV=1
Length = 102
Score = 33.5 bits (75), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 100 KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQID 159
KE+Q + ++ R K +T+V+G D + L + S L KFA G + VKG T ++
Sbjct: 23 KEQQRITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGT-VKGNT----VE 77
Query: 160 VQGD 163
+QG+
Sbjct: 78 LQGN 81
>sp|Q8PYK3|SUI1_METMA Protein translation factor SUI1 homolog OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_0858 PE=3 SV=1
Length = 102
Score = 33.5 bits (75), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 100 KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQID 159
KE+Q + ++ R K +T+V+G D + L + S L KFA G + VKG T ++
Sbjct: 23 KEQQRITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGT-VKGNT----VE 77
Query: 160 VQGD 163
+QG+
Sbjct: 78 LQGN 81
>sp|Q2FTC8|SUI1_METHJ Protein translation factor SUI1 homolog OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=Mhun_2911 PE=3 SV=1
Length = 101
Score = 33.5 bits (75), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 100 KERQEVVIEKVVRNKRKCITIVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQID 159
KE+Q + ++ R K +T+++GLD + L D SK + K A G + VKG + I+
Sbjct: 23 KEQQRINVKVNKRRYGKEVTVIEGLDPTDIDLEDLSKFMKSKLACGGT-VKGNS----IE 77
Query: 160 VQGDISYDIVEFITDTWPAVISLS 183
+QG+ +++ + V ++S
Sbjct: 78 LQGNHRDRVIDLLATKGYTVDNIS 101
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,889,308
Number of Sequences: 539616
Number of extensions: 3385046
Number of successful extensions: 11115
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 10962
Number of HSP's gapped (non-prelim): 148
length of query: 209
length of database: 191,569,459
effective HSP length: 112
effective length of query: 97
effective length of database: 131,132,467
effective search space: 12719849299
effective search space used: 12719849299
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)