BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028410
MERHVEALLRKISYGAITIATFTLVMLMLQTPETCILENSPKSTKFPKSSCDSSHRQHLP
LEKKNHRLWSSKSWKQQVTSYAHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVA
DVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVC
MVLMEECAGREIKQIVELFRTSSFTEAVR

High Scoring Gene Products

Symbol, full name Information P value
AT4G24805 protein from Arabidopsis thaliana 1.4e-23
AT1G24480 protein from Arabidopsis thaliana 3.4e-22
AT5G01710 protein from Arabidopsis thaliana 5.0e-13
AT3G53400 protein from Arabidopsis thaliana 4.7e-06
CPUORF47
conserved peptide upstream open reading frame 47
protein from Arabidopsis thaliana 6.4e-06

The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028410
        (209 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2052936 - symbol:AT2G16030 species:3702 "Arabi...   614  6.4e-60   1
TAIR|locus:2116412 - symbol:AT4G26730 species:3702 "Arabi...   459  8.6e-47   2
TAIR|locus:504955468 - symbol:AT4G24805 species:3702 "Ara...   271  1.4e-23   1
TAIR|locus:2023986 - symbol:AT1G24480 species:3702 "Arabi...   258  3.4e-22   1
TAIR|locus:2149790 - symbol:AT5G01710 species:3702 "Arabi...   180  5.0e-13   1
TAIR|locus:2084021 - symbol:AT3G53400 "AT3G53400" species...   129  4.7e-06   1
TAIR|locus:2143478 - symbol:CPUORF47 "conserved peptide u...   128  6.4e-06   1


>TAIR|locus:2052936 [details] [associations]
            symbol:AT2G16030 species:3702 "Arabidopsis thaliana"
            [GO:0008152 "metabolic process" evidence=IEA] [GO:0008168
            "methyltransferase activity" evidence=IEA] InterPro:IPR013216
            Pfam:PF08241 EMBL:CP002685 GO:GO:0008168 EMBL:AC007134
            UniGene:At.52759 UniGene:At.40327 ProtClustDB:CLSN2719849
            EMBL:BT008620 EMBL:AK229593 IPI:IPI00527238 PIR:H84535
            RefSeq:NP_179201.1 ProteinModelPortal:Q9XII4 SMR:Q9XII4
            EnsemblPlants:AT2G16030.1 GeneID:816100 KEGG:ath:AT2G16030
            TAIR:At2g16030 InParanoid:Q9XII4 OMA:NARIWSS PhylomeDB:Q9XII4
            Genevestigator:Q9XII4 Uniprot:Q9XII4
        Length = 231

 Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 113/208 (54%), Positives = 154/208 (74%)

Query:     1 MERHVEALLRKISYGAITIATFTLVMLMLQTPETCILENSPKS--TKFPKSSCDSSHRQH 58
             MER+VE +L+++S   ++I T  +V+++LQTP+TCI   +P    T FP+S+CDSS RQH
Sbjct:     1 MERNVEKMLKRVSIVFLSIGTVLMVIMILQTPKTCISPEAPSKPHTHFPRSTCDSSPRQH 60

Query:    59 LPLEKKNHRLWSSKSWKQQVTSYAHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIG 118
             LPL KKN R+WSS +WK ++ S++ +F   +    + NH+K LC+SAGAGH +MA + IG
Sbjct:    61 LPLPKKNARIWSSGAWKSRLYSFSTYFLRFRDLGFIQNHTKALCLSAGAGHALMALSQIG 120

Query:   119 VADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGG 178
             ++DVT VEL+DS+PLV RADPHNLPFFD  FD AFTAHLAEALFP +FV EMERTV+ GG
Sbjct:   121 LSDVTAVELVDSIPLVKRADPHNLPFFDGVFDFAFTAHLAEALFPWQFVEEMERTVRRGG 180

Query:   179 VCMVLMEECAGREIKQIVELFRTSSFTE 206
              C+V ++EC G +++ I  LF  S   +
Sbjct:   181 FCVVSVDECGGDDVRDIARLFHNSKVVD 208


>TAIR|locus:2116412 [details] [associations]
            symbol:AT4G26730 species:3702 "Arabidopsis thaliana"
            [GO:0008152 "metabolic process" evidence=IEA] [GO:0008168
            "methyltransferase activity" evidence=IEA] InterPro:IPR013216
            Pfam:PF08241 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035440
            EMBL:AL161565 GO:GO:0008168 IPI:IPI00533733 PIR:T04796
            RefSeq:NP_194403.1 UniGene:At.50367 ProteinModelPortal:Q9SZ14
            SMR:Q9SZ14 PRIDE:Q9SZ14 EnsemblPlants:AT4G26730.1 GeneID:828780
            KEGG:ath:AT4G26730 TAIR:At4g26730 eggNOG:NOG243011
            HOGENOM:HOG000241524 InParanoid:Q9SZ14 OMA:MDGHVRR PhylomeDB:Q9SZ14
            ProtClustDB:CLSN2719849 ArrayExpress:Q9SZ14 Genevestigator:Q9SZ14
            Uniprot:Q9SZ14
        Length = 208

 Score = 459 (166.6 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
 Identities = 82/149 (55%), Positives = 108/149 (72%)

Query:    58 HLPLEKKNHRLWSSKSWKQQVTSYAHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSI 117
             HLPL KKN R+W S +WK +++S++ +F   +    + NH+K LC+S GAGH  MA + I
Sbjct:    25 HLPLPKKNARIWFSGAWKSRLSSFSTYFLRFRDLGFIQNHTKALCLSDGAGHAPMALSQI 84

Query:   118 GVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIG 177
             G++DVT VEL+DS+PLV RADPHNLPFFD  FD  FTAHLAEALFP RFV EMERTV+ G
Sbjct:    85 GLSDVTAVELVDSIPLVKRADPHNLPFFDRVFDFVFTAHLAEALFPWRFVEEMERTVRRG 144

Query:   178 GVCMVLMEECAGREIKQIVELFRTSSFTE 206
             G C+V ++EC+G +++ I   F  S   +
Sbjct:   145 GFCVVAVDECSGDDVRDIARFFHNSKIVD 173

 Score = 48 (22.0 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query:     1 MERHVEALLRKISYGAITIATFTLVMLMLQTPE 33
             MER+VE +L ++S   ++I T   V++ L  P+
Sbjct:     1 MERNVEKMLNRVSVVFLSIGT---VLMHLPLPK 30


>TAIR|locus:504955468 [details] [associations]
            symbol:AT4G24805 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0008168 "methyltransferase
            activity" evidence=IEA] InterPro:IPR013216 Pfam:PF08241
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008168 EMBL:AY035095
            EMBL:AY063058 IPI:IPI00531311 RefSeq:NP_680738.1 UniGene:At.22473
            ProteinModelPortal:Q94C79 PaxDb:Q94C79 PRIDE:Q94C79
            EnsemblPlants:AT4G24805.1 GeneID:828583 KEGG:ath:AT4G24805
            TAIR:At4g24805 eggNOG:NOG146127 HOGENOM:HOG000242554
            InParanoid:Q94C79 OMA:ALCIGAR ProtClustDB:CLSN2690325
            Genevestigator:Q94C79 Uniprot:Q94C79
        Length = 247

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 60/162 (37%), Positives = 90/162 (55%)

Query:    55 HRQHLPLEKKNHRLWSSKSWKQQVTSYAHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAF 114
             H+ +     K  ++W+++ W ++V  ++ FF+ L  + LL N SK L + A  G EV A 
Sbjct:    67 HQLNKTQNPKLRKVWTTRDWDRKVRVFSTFFRRLSDRGLLSNQSKALSIGARVGQEVAAL 126

Query:   115 NSIGVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEMERTV 174
               IGV D  G++L+   PLV + D H  PF +E FD  F+     AL+P +FVGE+ERT+
Sbjct:   127 RLIGVEDSVGIDLVPRPPLVVKGDFHAQPFDEETFDFEFSNVFDHALYPEKFVGEIERTL 186

Query:   175 KIGGVCMVLMEECAGR----------EIKQIVELFRTSSFTE 206
             K GGVC VL    +G+           +K +V+LF+ S   E
Sbjct:   187 KPGGVC-VLHVSISGKTDKYSANDLLSVKPLVKLFKRSKVVE 227


>TAIR|locus:2023986 [details] [associations]
            symbol:AT1G24480 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0008168 "methyltransferase
            activity" evidence=IEA] InterPro:IPR013216 Pfam:PF08241
            EMBL:CP002684 GO:GO:0008168 EMBL:AC000103 UniGene:At.49913
            HOGENOM:HOG000242554 ProtClustDB:CLSN2690325 IPI:IPI00538959
            PIR:G86378 RefSeq:NP_173857.2 ProteinModelPortal:Q9FYL5 SMR:Q9FYL5
            PRIDE:Q9FYL5 EnsemblPlants:AT1G24480.1 GeneID:839064
            KEGG:ath:AT1G24480 TAIR:At1g24480 InParanoid:Q9FYL5 OMA:VWATRDW
            PhylomeDB:Q9FYL5 Genevestigator:Q9FYL5 Uniprot:Q9FYL5
        Length = 239

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 62/195 (31%), Positives = 100/195 (51%)

Query:    17 ITIATFTLVMLMLQTPETCILENSPKSTKFPKSSCDSSHRQ-HLPLEKKNHRLWSSKSWK 75
             +T+       + L+ PE  ++   P  T +         RQ +  L  +   +W ++ W 
Sbjct:    17 LTLPLILFFSIQLRKPEKELIRIRPGYTSYDYYI----QRQLNKTLNPRLRTIWMTRDWD 72

Query:    76 QQVTSYAHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPLVS 135
             +++  ++ FF+ L+ + LL   SK LC+ A  G EV A   +GV D  G++L+   PLV 
Sbjct:    73 RKIKVFSRFFQDLKRQGLLSKDSKCLCLGARVGQEVEALKRVGVNDSVGMDLVPYPPLVV 132

Query:   136 RADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQI 195
             + D H+ PF DE FD  F+     AL+P +FVGE+ERT++ GG+C VL    + R  K  
Sbjct:   133 KGDFHHQPFDDETFDFEFSNVFDHALYPDKFVGEIERTLRPGGLC-VLHVALSTRSDKYS 191

Query:   196 V-ELFRTSSFTEAVR 209
               +LF   +  +  R
Sbjct:   192 ANDLFSVEALVKLFR 206


>TAIR|locus:2149790 [details] [associations]
            symbol:AT5G01710 species:3702 "Arabidopsis thaliana"
            [GO:0008152 "metabolic process" evidence=IEA] [GO:0008168
            "methyltransferase activity" evidence=IEA] [GO:0006944 "cellular
            membrane fusion" evidence=RCA] [GO:0048193 "Golgi vesicle
            transport" evidence=RCA] InterPro:IPR013216 Pfam:PF08241
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008168 EMBL:AL161946
            InterPro:IPR006342 Pfam:PF05050 EMBL:AY056223 EMBL:AY142665
            EMBL:AF083794 IPI:IPI00529890 PIR:T48192 RefSeq:NP_195791.1
            UniGene:At.25489 ProteinModelPortal:Q9M005 SMR:Q9M005 PaxDb:Q9M005
            PRIDE:Q9M005 EnsemblPlants:AT5G01710.1 GeneID:831693
            KEGG:ath:AT5G01710 TAIR:At5g01710 eggNOG:NOG260407
            HOGENOM:HOG000030521 InParanoid:Q9M005 OMA:SFEINHD PhylomeDB:Q9M005
            ProtClustDB:CLSN2687136 ArrayExpress:Q9M005 Genevestigator:Q9M005
            Uniprot:Q9M005
        Length = 513

 Score = 180 (68.4 bits), Expect = 5.0e-13, P = 5.0e-13
 Identities = 56/204 (27%), Positives = 90/204 (44%)

Query:     8 LLRKISYGAITIAT-FTLVMLMLQTPETC-----ILENSPKSTKFPKSSC--DSSHRQHL 59
             ++R + +G + I   F  V+ +  T E+C        + P++  F  S     SS    +
Sbjct:    15 MVRVLLFGVLIIVVRFAYVVTI--TGESCNRGDFCFFSLPENLNFVISGAASGSSAIDAI 72

Query:    60 PLEKKNHRLWSSKSWKQQVTSYAHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGV 119
                     L++++ W + V  Y+  F+ L     L   SK LCV    G EV +   IGV
Sbjct:    73 RSTSPGDDLYTTRDWIKSVQFYSSIFQDLIADGYLSPESKTLCVETAIGQEVHSLREIGV 132

Query:   120 ADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTA--HLAEALFPSRFVGEMERTVKIG 177
              +  G+    S PLV R + H +PF D AFD  F+    L ++L    F  E+ RT+K  
Sbjct:   133 KNSVGISKKASRPLVVRGEGHAIPFEDNAFDFVFSGGDRLGKSLKQLEFADEITRTLKPE 192

Query:   178 GVCMVLMEECAGREIKQIVELFRT 201
             G  +V +           ++LF +
Sbjct:   193 GFAVVHVGATDTYSFNSFLDLFNS 216


>TAIR|locus:2084021 [details] [associations]
            symbol:AT3G53400 "AT3G53400" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AL132966 HOGENOM:HOG000015115
            ProtClustDB:CLSN2684919 IPI:IPI00520296 PIR:T45880
            RefSeq:NP_190908.1 UniGene:At.28564 ProteinModelPortal:Q9LFH7
            SMR:Q9LFH7 PRIDE:Q9LFH7 EnsemblPlants:AT3G53400.1 GeneID:824508
            KEGG:ath:AT3G53400 TAIR:At3g53400 eggNOG:NOG274358
            InParanoid:Q9LFH7 OMA:FERRIHY PhylomeDB:Q9LFH7
            Genevestigator:Q9LFH7 Uniprot:Q9LFH7
        Length = 466

 Score = 129 (50.5 bits), Expect = 4.7e-06, P = 4.7e-06
 Identities = 34/126 (26%), Positives = 56/126 (44%)

Query:    71 SKSWKQQVTSYAHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS 130
             S   K  +       + L G +LL N SK LC+   +   V+A N  G++DV+   +   
Sbjct:    92 SDKCKDNIYLTTQVVRELTGMNLLSNDSKALCIGRRSVSAVLAMNRQGISDVSVAYMPPV 151

Query:   131 LPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGR 190
                  R     L + D +F   F+  L     P+  V E+ER +K GG   +L+   +G 
Sbjct:   152 FAFKHRKFTSELHYEDASFGFVFSMDLESVAVPASLVYEIERILKPGGTGAMLVGTTSGS 211

Query:   191 EIKQIV 196
             +  ++V
Sbjct:   212 DSNELV 217


>TAIR|locus:2143478 [details] [associations]
            symbol:CPUORF47 "conserved peptide upstream open reading
            frame 47" species:3702 "Arabidopsis thaliana" [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0008168 "methyltransferase activity"
            evidence=IEA] InterPro:IPR013216 Pfam:PF08241 EMBL:CP002688
            GO:GO:0008168 GO:GO:0032259 EMBL:AL163002 UniGene:At.28243
            UniGene:At.63785 IPI:IPI00846400 RefSeq:NP_001078522.1
            ProteinModelPortal:A8MQH8 SMR:A8MQH8 EnsemblPlants:AT5G03190.2
            GeneID:831909 KEGG:ath:AT5G03190 TAIR:At5g03190 eggNOG:NOG266335
            HOGENOM:HOG000015115 OMA:ICYVDEL PhylomeDB:A8MQH8
            ProtClustDB:CLSN2684919 Genevestigator:A8MQH8 Uniprot:A8MQH8
        Length = 475

 Score = 128 (50.1 bits), Expect = 6.4e-06, P = 6.4e-06
 Identities = 36/122 (29%), Positives = 52/122 (42%)

Query:    82 AHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPLVSRADPHN 141
             A     L G  LL   +K+LC+  G+   V  F  +G + V GV         SR   + 
Sbjct:   114 ADLVDELMGLKLLHYDAKILCIGQGSDSAVSGFKEMGFSVVQGVPKHPLFSFFSRKHVNE 173

Query:   142 LPFF-DEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200
             L    D++FD      +     P+  V EMER +K GG   VL+   A R +K +    +
Sbjct:   174 LELSGDKSFDFVLCGDVDHVASPALLVLEMERVLKPGGTGAVLVSTNANRLVKSVTSGLK 233

Query:   201 TS 202
              S
Sbjct:   234 QS 235


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.133   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      209       209   0.00079  112 3  11 22  0.44    32
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  178 KB (2103 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.81u 0.10s 18.91t   Elapsed:  00:00:01
  Total cpu time:  18.81u 0.10s 18.91t   Elapsed:  00:00:01
  Start:  Fri May 10 19:12:37 2013   End:  Fri May 10 19:12:38 2013

Back to top