Query 028410
Match_columns 209
No_of_seqs 206 out of 2632
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 18:20:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028410.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028410hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 99.8 2.4E-19 8.2E-24 145.1 8.8 92 95-187 38-138 (257)
2 1vl5_A Unknown conserved prote 99.7 2.3E-17 7.7E-22 132.8 12.8 92 93-185 34-141 (260)
3 3dh0_A SAM dependent methyltra 99.7 1.4E-17 4.9E-22 130.4 10.5 113 93-205 34-174 (219)
4 3dlc_A Putative S-adenosyl-L-m 99.7 6.6E-18 2.3E-22 131.7 7.8 91 93-184 41-148 (219)
5 2p35_A Trans-aconitate 2-methy 99.7 1.5E-17 5.2E-22 133.4 9.8 99 87-186 24-134 (259)
6 3g5l_A Putative S-adenosylmeth 99.7 3.5E-17 1.2E-21 131.2 11.8 93 93-185 41-146 (253)
7 3kkz_A Uncharacterized protein 99.7 3.7E-17 1.3E-21 132.1 11.9 113 93-205 43-189 (267)
8 3l8d_A Methyltransferase; stru 99.7 2.3E-17 7.9E-22 131.0 10.1 111 94-205 51-193 (242)
9 3vc1_A Geranyl diphosphate 2-C 99.7 6.5E-17 2.2E-21 133.9 12.6 111 94-205 115-262 (312)
10 3f4k_A Putative methyltransfer 99.7 4.5E-17 1.6E-21 130.5 11.1 113 93-205 43-189 (257)
11 3h2b_A SAM-dependent methyltra 99.7 1.4E-17 4.6E-22 129.2 7.6 108 97-205 42-175 (203)
12 1xxl_A YCGJ protein; structura 99.7 1.4E-16 4.7E-21 126.9 13.7 92 93-185 18-125 (239)
13 3ujc_A Phosphoethanolamine N-m 99.7 9.9E-17 3.4E-21 128.9 12.6 120 85-205 44-199 (266)
14 1pjz_A Thiopurine S-methyltran 99.7 4.3E-17 1.5E-21 127.1 10.2 110 93-204 19-168 (203)
15 2p7i_A Hypothetical protein; p 99.7 3E-17 1E-21 130.3 9.4 90 95-186 41-143 (250)
16 1nkv_A Hypothetical protein YJ 99.7 7.5E-17 2.6E-21 129.2 11.7 111 93-205 33-180 (256)
17 2zfu_A Nucleomethylin, cerebra 99.7 6.9E-17 2.4E-21 126.4 10.8 107 95-205 66-172 (215)
18 2o57_A Putative sarcosine dime 99.7 1E-16 3.5E-21 131.4 12.2 112 93-205 79-227 (297)
19 3ege_A Putative methyltransfer 99.7 3E-17 1E-21 132.5 8.8 92 93-186 31-132 (261)
20 3bus_A REBM, methyltransferase 99.7 1.1E-16 3.9E-21 129.4 12.0 102 85-186 50-168 (273)
21 3ccf_A Cyclopropane-fatty-acyl 99.7 3E-17 1E-21 133.6 8.5 93 93-187 54-157 (279)
22 4htf_A S-adenosylmethionine-de 99.7 1.7E-16 6E-21 129.4 12.7 90 95-185 67-174 (285)
23 3hnr_A Probable methyltransfer 99.7 1.3E-16 4.5E-21 125.0 11.1 90 95-186 44-147 (220)
24 3sm3_A SAM-dependent methyltra 99.7 1.8E-16 6.1E-21 125.0 11.5 91 94-185 28-142 (235)
25 3dtn_A Putative methyltransfer 99.7 3E-16 1E-20 124.2 12.6 92 94-186 42-150 (234)
26 3dli_A Methyltransferase; PSI- 99.7 3.9E-17 1.3E-21 130.0 7.1 112 93-205 38-177 (240)
27 3ou2_A SAM-dependent methyltra 99.7 4.4E-16 1.5E-20 121.5 12.7 110 94-205 44-198 (218)
28 1xtp_A LMAJ004091AAA; SGPP, st 99.7 9.9E-17 3.4E-21 128.2 9.2 119 87-205 84-231 (254)
29 3mgg_A Methyltransferase; NYSG 99.7 2E-16 6.7E-21 128.3 11.1 96 90-185 31-143 (276)
30 3e23_A Uncharacterized protein 99.7 7.7E-17 2.6E-21 125.7 8.2 110 94-205 41-175 (211)
31 2yqz_A Hypothetical protein TT 99.7 4.2E-16 1.4E-20 125.1 12.0 93 93-186 36-143 (263)
32 4gek_A TRNA (CMO5U34)-methyltr 99.7 2.5E-16 8.7E-21 127.6 10.7 93 92-186 66-180 (261)
33 3bkw_A MLL3908 protein, S-aden 99.7 1.6E-16 5.5E-21 126.1 9.3 92 94-185 41-145 (243)
34 2gs9_A Hypothetical protein TT 99.7 6.1E-16 2.1E-20 120.5 11.6 90 95-187 35-135 (211)
35 2a14_A Indolethylamine N-methy 99.7 1.6E-16 5.4E-21 128.6 8.2 112 94-205 53-231 (263)
36 3cgg_A SAM-dependent methyltra 99.7 4E-16 1.4E-20 119.3 9.9 111 94-205 44-168 (195)
37 2ex4_A Adrenal gland protein A 99.7 1.9E-16 6.4E-21 126.2 8.2 111 95-205 78-218 (241)
38 3cc8_A Putative methyltransfer 99.6 4.6E-16 1.6E-20 122.1 9.6 110 95-205 31-178 (230)
39 2avn_A Ubiquinone/menaquinone 99.6 1E-15 3.5E-20 123.4 11.8 91 95-186 53-154 (260)
40 4fsd_A Arsenic methyltransfera 99.6 9.4E-16 3.2E-20 130.5 11.5 112 94-205 81-244 (383)
41 1ri5_A MRNA capping enzyme; me 99.6 7.8E-16 2.7E-20 125.7 10.3 94 93-186 61-176 (298)
42 3lcc_A Putative methyl chlorid 99.6 2.4E-16 8.1E-21 125.0 6.9 108 96-205 66-200 (235)
43 3ofk_A Nodulation protein S; N 99.6 5.9E-16 2E-20 121.0 9.1 91 93-185 48-155 (216)
44 4e2x_A TCAB9; kijanose, tetron 99.6 8.7E-17 3E-21 138.1 4.6 120 85-205 96-246 (416)
45 3g5t_A Trans-aconitate 3-methy 99.6 9.7E-16 3.3E-20 125.9 10.3 90 95-184 35-149 (299)
46 3jwg_A HEN1, methyltransferase 99.6 1E-15 3.5E-20 120.0 9.7 91 95-185 28-142 (219)
47 3pfg_A N-methyltransferase; N, 99.6 1.3E-15 4.6E-20 122.6 10.6 87 95-183 49-150 (263)
48 4df3_A Fibrillarin-like rRNA/T 99.6 6.3E-16 2.1E-20 123.0 8.2 130 74-204 55-209 (233)
49 3gu3_A Methyltransferase; alph 99.6 1.6E-15 5.4E-20 123.9 10.9 93 93-186 19-128 (284)
50 2g72_A Phenylethanolamine N-me 99.6 5.3E-16 1.8E-20 126.9 7.2 111 95-205 70-249 (289)
51 2xvm_A Tellurite resistance pr 99.6 1.6E-15 5.6E-20 116.6 9.5 109 95-205 31-168 (199)
52 3i9f_A Putative type 11 methyl 99.6 7.2E-16 2.5E-20 116.2 7.3 105 94-204 15-140 (170)
53 1kpg_A CFA synthase;, cyclopro 99.6 4E-15 1.4E-19 121.3 12.0 98 85-186 53-170 (287)
54 2gb4_A Thiopurine S-methyltran 99.6 8.5E-16 2.9E-20 123.9 7.8 106 95-201 67-217 (252)
55 2p8j_A S-adenosylmethionine-de 99.6 2.5E-15 8.5E-20 116.7 9.8 92 94-186 21-130 (209)
56 3thr_A Glycine N-methyltransfe 99.6 5.8E-16 2E-20 126.5 6.5 91 95-186 56-177 (293)
57 3ocj_A Putative exported prote 99.6 1.1E-15 3.7E-20 126.1 7.7 91 93-184 115-227 (305)
58 3hem_A Cyclopropane-fatty-acyl 99.6 3.7E-15 1.3E-19 122.6 10.8 99 85-187 61-186 (302)
59 1vlm_A SAM-dependent methyltra 99.6 4.1E-15 1.4E-19 116.8 10.5 106 95-205 46-181 (219)
60 3jwh_A HEN1; methyltransferase 99.6 2.2E-15 7.6E-20 118.0 8.9 91 95-185 28-142 (217)
61 1nt2_A Fibrillarin-like PRE-rR 99.6 1.5E-15 5.1E-20 119.2 7.3 92 93-186 54-163 (210)
62 1ve3_A Hypothetical protein PH 99.6 8.3E-15 2.8E-19 115.0 11.6 92 94-186 36-144 (227)
63 2plw_A Ribosomal RNA methyltra 99.6 1.3E-14 4.4E-19 112.1 12.5 106 93-200 19-168 (201)
64 2aot_A HMT, histamine N-methyl 99.6 8.3E-16 2.9E-20 126.0 5.8 92 95-186 51-174 (292)
65 2i62_A Nicotinamide N-methyltr 99.6 3.5E-15 1.2E-19 119.8 9.3 113 93-205 53-232 (265)
66 3e8s_A Putative SAM dependent 99.6 1.3E-15 4.5E-20 119.3 6.5 110 95-205 51-202 (227)
67 2fk8_A Methoxy mycolic acid sy 99.6 1.1E-14 3.7E-19 120.5 12.0 100 84-187 78-197 (318)
68 3iv6_A Putative Zn-dependent a 99.6 4.2E-15 1.4E-19 120.3 9.2 98 88-187 37-151 (261)
69 3bkx_A SAM-dependent methyltra 99.6 3.4E-14 1.2E-18 114.9 14.6 94 93-186 40-161 (275)
70 3e05_A Precorrin-6Y C5,15-meth 99.6 1.3E-14 4.3E-19 112.7 11.6 108 93-204 37-160 (204)
71 1y8c_A S-adenosylmethionine-de 99.6 3.3E-15 1.1E-19 118.5 8.1 88 95-184 36-142 (246)
72 2pxx_A Uncharacterized protein 99.6 6.5E-15 2.2E-19 114.4 9.6 94 94-187 40-162 (215)
73 1xdz_A Methyltransferase GIDB; 99.6 2.7E-15 9.1E-20 119.7 7.1 107 95-204 69-194 (240)
74 3ggd_A SAM-dependent methyltra 99.6 1.2E-15 4.3E-20 121.5 4.8 92 94-186 54-165 (245)
75 2kw5_A SLR1183 protein; struct 99.6 4.8E-15 1.7E-19 114.6 7.8 104 95-200 29-161 (202)
76 3m70_A Tellurite resistance pr 99.6 5.8E-15 2E-19 120.4 8.7 110 95-206 119-256 (286)
77 3g2m_A PCZA361.24; SAM-depende 99.6 1.2E-14 4.2E-19 119.3 10.6 90 96-187 82-193 (299)
78 1zx0_A Guanidinoacetate N-meth 99.6 7E-16 2.4E-20 122.6 2.9 91 94-184 58-170 (236)
79 3q87_B N6 adenine specific DNA 99.6 6.5E-15 2.2E-19 111.6 8.0 105 95-205 22-142 (170)
80 3orh_A Guanidinoacetate N-meth 99.6 8.4E-16 2.9E-20 122.6 2.7 90 95-184 59-170 (236)
81 1ej0_A FTSJ; methyltransferase 99.6 5.5E-14 1.9E-18 105.4 12.6 94 93-187 19-139 (180)
82 3m33_A Uncharacterized protein 99.6 1.8E-15 6.3E-20 119.5 4.5 102 95-205 47-160 (226)
83 3mti_A RRNA methylase; SAM-dep 99.6 5E-15 1.7E-19 113.1 6.8 93 93-186 19-137 (185)
84 3g07_A 7SK snRNA methylphospha 99.5 1.3E-14 4.5E-19 119.1 9.4 90 95-184 45-220 (292)
85 3dou_A Ribosomal RNA large sub 99.5 7.2E-14 2.4E-18 108.0 12.2 105 93-200 22-153 (191)
86 3q7e_A Protein arginine N-meth 99.5 1.5E-14 5.2E-19 121.7 9.1 89 94-182 64-171 (349)
87 1yzh_A TRNA (guanine-N(7)-)-me 99.5 1.4E-14 4.7E-19 113.4 7.9 108 95-204 40-174 (214)
88 2nyu_A Putative ribosomal RNA 99.5 5.1E-14 1.8E-18 108.2 10.8 105 92-198 18-157 (196)
89 2vdw_A Vaccinia virus capping 99.5 1.3E-14 4.5E-19 119.8 7.7 92 95-186 47-171 (302)
90 1wzn_A SAM-dependent methyltra 99.5 3.8E-14 1.3E-18 113.2 9.9 99 85-185 30-146 (252)
91 3grz_A L11 mtase, ribosomal pr 99.5 3.4E-14 1.2E-18 110.2 9.4 106 94-205 58-178 (205)
92 3njr_A Precorrin-6Y methylase; 99.5 5E-14 1.7E-18 109.8 10.3 105 93-204 52-172 (204)
93 3mq2_A 16S rRNA methyltransfer 99.5 6.1E-14 2.1E-18 109.8 10.3 92 94-186 25-142 (218)
94 3g89_A Ribosomal RNA small sub 99.5 5.2E-15 1.8E-19 119.1 4.2 107 95-204 79-204 (249)
95 2fca_A TRNA (guanine-N(7)-)-me 99.5 1E-14 3.6E-19 114.4 5.8 108 95-204 37-171 (213)
96 3uwp_A Histone-lysine N-methyl 99.5 1.2E-14 4.1E-19 123.8 6.4 98 86-183 163-287 (438)
97 3hm2_A Precorrin-6Y C5,15-meth 99.5 2.3E-14 7.9E-19 108.3 7.3 106 93-203 22-144 (178)
98 2fyt_A Protein arginine N-meth 99.5 1.1E-13 3.7E-18 116.1 12.0 89 93-181 61-168 (340)
99 1fbn_A MJ fibrillarin homologu 99.5 4.4E-14 1.5E-18 111.9 9.0 88 93-185 71-179 (230)
100 1dus_A MJ0882; hypothetical pr 99.5 7.1E-14 2.4E-18 106.6 9.9 93 93-187 49-160 (194)
101 3evz_A Methyltransferase; NYSG 99.5 2.6E-14 8.8E-19 112.8 7.4 111 93-204 52-198 (230)
102 3p9n_A Possible methyltransfer 99.5 2.7E-14 9.3E-19 109.6 7.2 93 95-187 43-156 (189)
103 3r0q_C Probable protein argini 99.5 7.8E-14 2.7E-18 118.5 10.5 98 85-184 52-169 (376)
104 3bxo_A N,N-dimethyltransferase 99.5 6E-14 2E-18 110.9 8.7 88 95-184 39-141 (239)
105 3dmg_A Probable ribosomal RNA 99.5 5.2E-14 1.8E-18 119.8 8.8 109 95-205 232-360 (381)
106 3lpm_A Putative methyltransfer 99.5 3.6E-14 1.2E-18 114.4 7.4 109 93-204 45-193 (259)
107 3hp7_A Hemolysin, putative; st 99.5 1.1E-13 3.8E-18 113.4 10.3 88 95-184 84-185 (291)
108 3eey_A Putative rRNA methylase 99.5 3.4E-14 1.2E-18 109.5 6.8 94 93-186 19-141 (197)
109 3fpf_A Mtnas, putative unchara 99.5 5.8E-14 2E-18 115.1 8.3 91 91-185 117-223 (298)
110 3d2l_A SAM-dependent methyltra 99.5 8.6E-14 2.9E-18 110.2 8.6 87 95-184 32-137 (243)
111 2ipx_A RRNA 2'-O-methyltransfe 99.5 1.7E-13 5.9E-18 108.5 9.9 111 92-204 73-209 (233)
112 2oxt_A Nucleoside-2'-O-methylt 99.5 2.4E-13 8.1E-18 110.3 10.7 91 92-187 70-188 (265)
113 3i53_A O-methyltransferase; CO 99.5 2E-13 6.9E-18 113.7 10.5 109 94-205 167-314 (332)
114 2frn_A Hypothetical protein PH 99.5 4.6E-14 1.6E-18 115.1 6.4 107 94-204 123-249 (278)
115 3id6_C Fibrillarin-like rRNA/T 99.5 1.9E-13 6.5E-18 108.7 9.8 111 92-204 72-208 (232)
116 1p91_A Ribosomal RNA large sub 99.5 1.1E-13 3.8E-18 111.7 8.6 88 95-188 84-182 (269)
117 3sso_A Methyltransferase; macr 99.5 4.9E-14 1.7E-18 119.6 6.6 90 95-184 215-324 (419)
118 2wa2_A Non-structural protein 99.5 2.1E-13 7.2E-18 111.2 10.0 91 92-187 78-196 (276)
119 3gwz_A MMCR; methyltransferase 99.5 4.9E-13 1.7E-17 113.1 12.6 115 88-205 194-349 (369)
120 3bgv_A MRNA CAP guanine-N7 met 99.5 1.1E-13 3.7E-18 114.4 8.3 92 95-186 33-157 (313)
121 1l3i_A Precorrin-6Y methyltran 99.5 1.7E-13 6E-18 104.2 8.8 106 93-204 30-152 (192)
122 2r3s_A Uncharacterized protein 99.5 5.2E-13 1.8E-17 111.0 12.3 109 95-205 164-316 (335)
123 2ip2_A Probable phenazine-spec 99.5 1.5E-12 5.2E-17 108.4 14.8 89 93-185 165-273 (334)
124 1jsx_A Glucose-inhibited divis 99.5 1.8E-13 6.3E-18 106.1 8.6 98 96-200 65-178 (207)
125 2y1w_A Histone-arginine methyl 99.5 2.6E-13 8.9E-18 114.1 10.2 91 93-184 47-155 (348)
126 2qe6_A Uncharacterized protein 99.5 3.9E-13 1.3E-17 109.5 10.9 94 95-188 76-200 (274)
127 2yxd_A Probable cobalt-precorr 99.4 2.9E-13 1E-17 102.3 9.1 103 93-204 32-149 (183)
128 1g6q_1 HnRNP arginine N-methyl 99.4 2.6E-13 8.8E-18 113.2 9.5 87 95-181 37-142 (328)
129 3dxy_A TRNA (guanine-N(7)-)-me 99.4 3.7E-14 1.3E-18 111.8 4.2 104 95-200 33-164 (218)
130 3lbf_A Protein-L-isoaspartate 99.4 1.3E-13 4.4E-18 107.3 6.9 88 93-186 74-176 (210)
131 4dcm_A Ribosomal RNA large sub 99.4 4.6E-13 1.6E-17 113.7 10.9 110 94-205 220-354 (375)
132 3p2e_A 16S rRNA methylase; met 99.4 1.6E-13 5.6E-18 108.6 7.4 90 95-184 23-139 (225)
133 3lst_A CALO1 methyltransferase 99.4 9.1E-13 3.1E-17 110.6 12.4 111 92-205 180-329 (348)
134 2nxc_A L11 mtase, ribosomal pr 99.4 3.6E-13 1.2E-17 108.4 9.5 106 94-205 118-237 (254)
135 3mcz_A O-methyltransferase; ad 99.4 1.2E-12 4E-17 109.8 12.9 92 93-185 175-288 (352)
136 3opn_A Putative hemolysin; str 99.4 2.6E-13 9E-18 108.0 8.5 83 95-184 36-137 (232)
137 2bm8_A Cephalosporin hydroxyla 99.4 4.7E-13 1.6E-17 106.7 9.9 105 96-202 81-207 (236)
138 4dzr_A Protein-(glutamine-N5) 99.4 5.1E-14 1.7E-18 109.2 3.8 107 95-205 29-185 (215)
139 1x19_A CRTF-related protein; m 99.4 7.9E-13 2.7E-17 111.3 11.4 89 93-184 187-295 (359)
140 2esr_A Methyltransferase; stru 99.4 5.2E-14 1.8E-18 106.6 3.7 95 94-188 29-142 (177)
141 3ckk_A TRNA (guanine-N(7)-)-me 99.4 5.5E-13 1.9E-17 106.3 9.7 108 94-203 44-185 (235)
142 1qzz_A RDMB, aclacinomycin-10- 99.4 6.3E-13 2.2E-17 112.3 10.4 109 94-205 180-332 (374)
143 3dp7_A SAM-dependent methyltra 99.4 6E-13 2.1E-17 112.4 10.2 89 95-185 178-288 (363)
144 1fp1_D Isoliquiritigenin 2'-O- 99.4 7.2E-13 2.5E-17 112.2 10.6 87 94-184 207-306 (372)
145 2pwy_A TRNA (adenine-N(1)-)-me 99.4 6.1E-13 2.1E-17 106.4 9.7 107 93-205 93-217 (258)
146 3bzb_A Uncharacterized protein 99.4 9.9E-14 3.4E-18 113.3 4.8 134 67-204 54-229 (281)
147 1yb2_A Hypothetical protein TA 99.4 4.1E-13 1.4E-17 109.1 8.3 107 91-204 105-229 (275)
148 3mb5_A SAM-dependent methyltra 99.4 3E-13 1E-17 108.3 7.4 105 92-203 89-211 (255)
149 2b3t_A Protein methyltransfera 99.4 6.1E-13 2.1E-17 108.1 9.3 107 95-205 108-256 (276)
150 2fpo_A Methylase YHHF; structu 99.4 1.6E-13 5.4E-18 106.7 5.0 92 96-187 54-163 (202)
151 2fhp_A Methylase, putative; al 99.4 1E-13 3.6E-18 105.5 3.9 94 95-188 43-158 (187)
152 2p41_A Type II methyltransfera 99.4 2E-12 6.9E-17 106.9 11.7 92 92-187 78-194 (305)
153 1af7_A Chemotaxis receptor met 99.4 4.5E-13 1.5E-17 109.1 7.5 91 96-186 105-254 (274)
154 3reo_A (ISO)eugenol O-methyltr 99.4 3.8E-12 1.3E-16 107.7 13.2 88 94-185 201-301 (368)
155 3htx_A HEN1; HEN1, small RNA m 99.4 9.1E-13 3.1E-17 120.1 9.8 90 95-185 720-835 (950)
156 1vbf_A 231AA long hypothetical 99.4 8.7E-13 3E-17 104.0 8.4 89 93-187 67-168 (231)
157 2ift_A Putative methylase HI07 99.4 3E-13 1E-17 105.1 5.0 93 96-188 53-167 (201)
158 1tw3_A COMT, carminomycin 4-O- 99.4 4.4E-12 1.5E-16 106.6 12.5 91 93-186 180-290 (360)
159 1fp2_A Isoflavone O-methyltran 99.4 1.6E-12 5.4E-17 109.2 9.6 88 94-185 186-289 (352)
160 2ozv_A Hypothetical protein AT 99.4 3E-12 1E-16 103.3 10.8 105 94-201 34-184 (260)
161 4azs_A Methyltransferase WBDD; 99.4 2.1E-13 7.1E-18 121.7 3.7 92 95-187 65-176 (569)
162 2pjd_A Ribosomal RNA small sub 99.4 6E-13 2.1E-17 111.6 5.9 107 95-204 195-322 (343)
163 4hc4_A Protein arginine N-meth 99.4 3.4E-12 1.2E-16 108.2 10.4 87 95-182 82-187 (376)
164 1i9g_A Hypothetical protein RV 99.3 3.6E-12 1.2E-16 103.3 9.9 106 93-204 96-222 (280)
165 3fzg_A 16S rRNA methylase; met 99.3 2E-13 6.9E-18 104.8 2.2 89 95-185 48-152 (200)
166 2yxe_A Protein-L-isoaspartate 99.3 1.3E-12 4.3E-17 102.0 6.8 90 93-187 74-180 (215)
167 3bwc_A Spermidine synthase; SA 99.3 5.1E-13 1.7E-17 110.4 4.6 110 95-204 94-232 (304)
168 1dl5_A Protein-L-isoaspartate 99.3 1.7E-12 5.7E-17 107.7 7.2 90 93-187 72-178 (317)
169 2vdv_E TRNA (guanine-N(7)-)-me 99.3 5.1E-12 1.8E-16 100.9 9.5 108 94-203 47-190 (246)
170 3adn_A Spermidine synthase; am 99.3 6.9E-12 2.4E-16 103.1 10.4 93 95-187 82-201 (294)
171 1g8a_A Fibrillarin-like PRE-rR 99.3 6.8E-12 2.3E-16 98.7 10.0 92 93-186 70-180 (227)
172 1o54_A SAM-dependent O-methylt 99.3 1.7E-12 5.7E-17 105.5 6.6 106 93-205 109-232 (277)
173 2yvl_A TRMI protein, hypotheti 99.3 4.4E-12 1.5E-16 100.8 8.9 103 93-202 88-206 (248)
174 3b3j_A Histone-arginine methyl 99.3 4.1E-12 1.4E-16 111.1 9.2 91 93-184 155-263 (480)
175 3p9c_A Caffeic acid O-methyltr 99.3 1.1E-11 3.8E-16 104.7 11.0 88 94-185 199-299 (364)
176 3gdh_A Trimethylguanosine synt 99.3 1.7E-14 5.9E-19 114.6 -6.0 107 95-203 77-210 (241)
177 1u2z_A Histone-lysine N-methyl 99.3 4.9E-12 1.7E-16 109.0 8.8 91 93-183 239-358 (433)
178 2ld4_A Anamorsin; methyltransf 99.3 3.9E-13 1.3E-17 101.9 1.5 107 93-205 9-129 (176)
179 3r3h_A O-methyltransferase, SA 99.3 4.1E-12 1.4E-16 101.5 7.5 87 95-183 59-169 (242)
180 2xyq_A Putative 2'-O-methyl tr 99.3 9.2E-12 3.2E-16 102.1 9.5 109 92-205 59-190 (290)
181 1ws6_A Methyltransferase; stru 99.3 6.7E-13 2.3E-17 99.4 2.4 92 95-188 40-151 (171)
182 3dr5_A Putative O-methyltransf 99.3 2.4E-12 8.1E-17 101.6 5.7 86 95-182 55-161 (221)
183 2b25_A Hypothetical protein; s 99.3 9E-12 3.1E-16 104.0 9.3 102 93-200 102-233 (336)
184 3ntv_A MW1564 protein; rossman 99.3 1.8E-12 6.2E-17 102.8 4.2 86 95-182 70-174 (232)
185 3ajd_A Putative methyltransfer 99.3 3E-12 1E-16 104.1 5.7 107 93-199 80-227 (274)
186 1o9g_A RRNA methyltransferase; 99.3 7.8E-12 2.7E-16 100.0 7.8 89 95-183 50-213 (250)
187 3u81_A Catechol O-methyltransf 99.3 3.5E-12 1.2E-16 100.2 5.6 103 95-200 57-184 (221)
188 1jg1_A PIMT;, protein-L-isoasp 99.3 4.8E-12 1.7E-16 100.3 6.4 89 93-188 88-193 (235)
189 3lec_A NADB-rossmann superfami 99.3 5.3E-12 1.8E-16 100.0 6.6 107 93-204 18-141 (230)
190 1zg3_A Isoflavanone 4'-O-methy 99.3 1.4E-11 4.7E-16 103.7 9.5 87 95-185 192-294 (358)
191 1ixk_A Methyltransferase; open 99.3 5.1E-12 1.7E-16 104.8 6.7 112 93-204 115-267 (315)
192 3tfw_A Putative O-methyltransf 99.3 6.3E-12 2.1E-16 100.7 6.4 87 95-183 62-169 (248)
193 3gjy_A Spermidine synthase; AP 99.3 3.6E-12 1.2E-16 105.5 5.0 107 97-203 90-224 (317)
194 1i1n_A Protein-L-isoaspartate 99.3 1.5E-11 5E-16 96.7 8.3 89 94-187 75-185 (226)
195 3tma_A Methyltransferase; thum 99.2 1.1E-11 3.6E-16 104.4 7.4 96 91-186 198-319 (354)
196 3a27_A TYW2, uncharacterized p 99.2 6E-12 2.1E-16 102.3 5.6 91 93-187 116-222 (272)
197 2igt_A SAM dependent methyltra 99.2 3.9E-12 1.3E-16 106.3 4.2 105 95-200 152-288 (332)
198 2gpy_A O-methyltransferase; st 99.2 5E-12 1.7E-16 99.9 4.6 87 95-183 53-159 (233)
199 3gnl_A Uncharacterized protein 99.2 9.4E-12 3.2E-16 99.4 6.1 107 93-204 18-141 (244)
200 2qm3_A Predicted methyltransfe 99.2 2.5E-11 8.5E-16 102.9 9.1 108 95-204 171-301 (373)
201 3c3p_A Methyltransferase; NP_9 99.2 4.1E-12 1.4E-16 98.9 3.8 86 95-183 55-159 (210)
202 1r18_A Protein-L-isoaspartate( 99.2 2.1E-11 7E-16 96.1 7.9 89 93-187 81-197 (227)
203 3giw_A Protein of unknown func 99.2 2.3E-11 7.9E-16 98.6 8.3 108 96-203 78-221 (277)
204 3kr9_A SAM-dependent methyltra 99.2 1.5E-11 5E-16 97.3 6.3 106 93-204 12-135 (225)
205 2pbf_A Protein-L-isoaspartate 99.2 4E-11 1.4E-15 94.2 8.5 89 93-186 77-195 (227)
206 1nv8_A HEMK protein; class I a 99.2 9.6E-12 3.3E-16 101.7 5.1 103 95-202 122-264 (284)
207 3tr6_A O-methyltransferase; ce 99.2 1E-11 3.6E-16 97.4 4.9 87 95-183 63-173 (225)
208 1sqg_A SUN protein, FMU protei 99.2 8.8E-11 3E-15 101.3 10.7 109 93-201 243-392 (429)
209 1inl_A Spermidine synthase; be 99.2 1.4E-11 4.9E-16 101.3 5.4 92 95-186 89-207 (296)
210 3duw_A OMT, O-methyltransferas 99.2 1.1E-11 3.6E-16 97.3 4.0 87 95-183 57-166 (223)
211 1iy9_A Spermidine synthase; ro 99.2 1.5E-11 5.2E-16 100.1 4.9 92 95-186 74-191 (275)
212 1sui_A Caffeoyl-COA O-methyltr 99.2 2.6E-11 8.9E-16 97.2 5.8 87 95-183 78-189 (247)
213 1ne2_A Hypothetical protein TA 99.2 1.5E-10 5.2E-15 89.2 10.0 101 94-203 49-162 (200)
214 2h00_A Methyltransferase 10 do 99.2 1.7E-11 5.9E-16 98.1 4.7 60 96-155 65-147 (254)
215 2yxl_A PH0851 protein, 450AA l 99.2 8.8E-11 3E-15 101.9 9.4 110 93-202 256-408 (450)
216 2cmg_A Spermidine synthase; tr 99.1 5.9E-11 2E-15 96.0 6.6 85 95-187 71-174 (262)
217 3k6r_A Putative transferase PH 99.1 1.1E-10 3.6E-15 95.2 7.9 107 94-204 123-249 (278)
218 4a6d_A Hydroxyindole O-methylt 99.1 4E-10 1.4E-14 94.7 11.7 92 93-186 176-285 (353)
219 2frx_A Hypothetical protein YE 99.1 8.5E-11 2.9E-15 102.7 7.7 107 96-202 117-265 (479)
220 1uir_A Polyamine aminopropyltr 99.1 8.8E-11 3E-15 97.3 7.3 92 95-186 76-197 (314)
221 2ih2_A Modification methylase 99.1 6.3E-10 2.2E-14 95.1 12.8 109 95-204 38-186 (421)
222 4dmg_A Putative uncharacterize 99.1 4.7E-11 1.6E-15 101.9 5.7 93 95-188 213-330 (393)
223 3cbg_A O-methyltransferase; cy 99.1 3.7E-11 1.3E-15 95.2 4.6 87 95-183 71-181 (232)
224 2pt6_A Spermidine synthase; tr 99.1 1.2E-10 4.1E-15 96.8 7.5 92 95-186 115-232 (321)
225 1mjf_A Spermidine synthase; sp 99.1 7.7E-11 2.6E-15 96.2 6.2 92 95-187 74-196 (281)
226 1wy7_A Hypothetical protein PH 99.1 3.6E-10 1.2E-14 87.4 9.6 104 94-204 47-167 (207)
227 1xj5_A Spermidine synthase 1; 99.1 1.4E-10 4.7E-15 97.0 7.6 92 95-186 119-237 (334)
228 2hnk_A SAM-dependent O-methylt 99.1 5.1E-11 1.7E-15 94.6 4.7 88 95-184 59-181 (239)
229 3tm4_A TRNA (guanine N2-)-meth 99.1 1.7E-10 5.9E-15 97.8 8.2 104 94-204 215-344 (373)
230 3m6w_A RRNA methylase; rRNA me 99.1 3.5E-11 1.2E-15 104.6 3.9 109 93-201 98-247 (464)
231 2avd_A Catechol-O-methyltransf 99.1 8.6E-11 2.9E-15 92.3 5.6 87 95-183 68-178 (229)
232 1yub_A Ermam, rRNA methyltrans 99.1 7.2E-12 2.4E-16 100.2 -0.7 91 93-185 26-146 (245)
233 3c3y_A Pfomt, O-methyltransfer 99.1 8.9E-11 3E-15 93.4 5.4 87 95-183 69-180 (237)
234 2o07_A Spermidine synthase; st 99.1 1.6E-10 5.5E-15 95.4 7.0 92 95-186 94-211 (304)
235 3v97_A Ribosomal RNA large sub 99.1 1.3E-10 4.5E-15 105.9 6.9 93 95-187 538-660 (703)
236 2b78_A Hypothetical protein SM 99.1 9.1E-11 3.1E-15 99.9 5.3 94 95-188 211-335 (385)
237 2i7c_A Spermidine synthase; tr 99.0 2.4E-10 8.3E-15 93.3 6.7 92 95-186 77-194 (283)
238 2b2c_A Spermidine synthase; be 99.0 2.1E-10 7.1E-15 95.1 6.3 92 95-186 107-224 (314)
239 3m4x_A NOL1/NOP2/SUN family pr 99.0 8.4E-11 2.9E-15 102.0 3.9 111 93-203 102-254 (456)
240 2yx1_A Hypothetical protein MJ 99.0 1.6E-10 5.5E-15 96.6 5.2 95 95-200 194-304 (336)
241 2as0_A Hypothetical protein PH 99.0 6.4E-11 2.2E-15 101.1 2.8 93 95-187 216-338 (396)
242 2f8l_A Hypothetical protein LM 99.0 1.7E-10 6E-15 96.5 5.3 110 95-205 129-279 (344)
243 1zq9_A Probable dimethyladenos 99.0 4.2E-10 1.4E-14 92.0 6.6 60 93-155 25-100 (285)
244 3frh_A 16S rRNA methylase; met 99.0 6.1E-10 2.1E-14 88.4 7.2 99 79-185 91-206 (253)
245 3evf_A RNA-directed RNA polyme 99.0 6.2E-09 2.1E-13 83.8 13.1 106 92-197 70-197 (277)
246 3c0k_A UPF0064 protein YCCW; P 99.0 5.6E-10 1.9E-14 95.3 7.3 93 95-187 219-342 (396)
247 1wxx_A TT1595, hypothetical pr 99.0 1.1E-10 3.8E-15 99.2 2.6 92 96-188 209-329 (382)
248 3lcv_B Sisomicin-gentamicin re 98.9 1.5E-09 5.2E-14 87.1 6.3 89 95-186 131-237 (281)
249 3gru_A Dimethyladenosine trans 98.9 3E-09 1E-13 87.3 6.9 64 91-155 45-121 (295)
250 2h1r_A Dimethyladenosine trans 98.9 3.3E-09 1.1E-13 87.3 7.1 60 93-155 39-113 (299)
251 1uwv_A 23S rRNA (uracil-5-)-me 98.8 5.5E-09 1.9E-13 90.2 7.5 89 93-185 283-390 (433)
252 1qam_A ERMC' methyltransferase 98.8 1.6E-09 5.4E-14 86.6 3.2 67 86-154 20-100 (244)
253 2jjq_A Uncharacterized RNA met 98.8 8.7E-09 3E-13 88.7 7.9 87 94-185 288-388 (425)
254 3gcz_A Polyprotein; flavivirus 98.8 4.7E-08 1.6E-12 78.9 10.4 96 92-187 86-204 (282)
255 3ldu_A Putative methylase; str 98.8 1.2E-08 4E-13 86.9 7.2 99 88-187 187-347 (385)
256 3k0b_A Predicted N6-adenine-sp 98.8 1.2E-08 4.1E-13 87.0 7.0 98 89-187 194-353 (393)
257 2b9e_A NOL1/NOP2/SUN domain fa 98.7 3E-08 1E-12 81.9 8.0 109 93-202 99-253 (309)
258 2k4m_A TR8_protein, UPF0146 pr 98.7 7.4E-08 2.5E-12 70.4 9.0 61 95-156 34-97 (153)
259 3ldg_A Putative uncharacterize 98.7 2.1E-08 7.1E-13 85.3 7.0 98 89-187 187-346 (384)
260 2okc_A Type I restriction enzy 98.7 2.8E-08 9.5E-13 86.0 7.6 110 94-204 169-331 (445)
261 3tqs_A Ribosomal RNA small sub 98.7 6.1E-08 2.1E-12 77.9 8.5 60 93-154 26-102 (255)
262 3fut_A Dimethyladenosine trans 98.7 2E-08 6.9E-13 81.4 5.5 61 93-155 44-117 (271)
263 3ftd_A Dimethyladenosine trans 98.7 6.1E-08 2.1E-12 77.6 8.1 91 93-184 28-129 (249)
264 2qfm_A Spermine synthase; sper 98.7 2.1E-08 7.2E-13 84.2 5.5 94 95-188 187-318 (364)
265 3eld_A Methyltransferase; flav 98.6 2.6E-07 8.9E-12 75.0 11.3 106 92-197 77-204 (300)
266 4auk_A Ribosomal RNA large sub 98.6 4.8E-07 1.7E-11 76.0 12.9 81 93-177 208-296 (375)
267 2px2_A Genome polyprotein [con 98.6 1.4E-07 5E-12 75.0 8.5 108 92-201 69-204 (269)
268 3o4f_A Spermidine synthase; am 98.6 1.8E-07 6.1E-12 76.5 8.1 93 95-187 82-201 (294)
269 3bt7_A TRNA (uracil-5-)-methyl 98.5 3E-08 1E-12 83.8 2.9 84 97-186 214-328 (369)
270 3axs_A Probable N(2),N(2)-dime 98.5 1.6E-08 5.5E-13 86.1 0.9 87 95-184 51-158 (392)
271 4gqb_A Protein arginine N-meth 98.5 2.3E-07 7.8E-12 83.2 7.8 84 96-180 357-463 (637)
272 3b5i_A S-adenosyl-L-methionine 98.5 8.8E-07 3E-11 74.9 10.5 93 97-189 53-230 (374)
273 2efj_A 3,7-dimethylxanthine me 98.5 1.3E-07 4.3E-12 80.2 4.9 93 97-189 53-230 (384)
274 2ar0_A M.ecoki, type I restric 98.5 1.5E-07 5E-12 83.4 5.4 106 94-199 167-330 (541)
275 2dul_A N(2),N(2)-dimethylguano 98.4 5.6E-08 1.9E-12 82.4 2.4 86 96-184 47-164 (378)
276 3v97_A Ribosomal RNA large sub 98.4 4.1E-07 1.4E-11 82.9 7.0 96 91-186 185-349 (703)
277 2r6z_A UPF0341 protein in RSP 98.4 4.1E-08 1.4E-12 79.1 0.2 61 95-156 82-169 (258)
278 4fzv_A Putative methyltransfer 98.4 3.6E-07 1.2E-11 76.8 5.9 105 93-197 145-297 (359)
279 3uzu_A Ribosomal RNA small sub 98.3 6.1E-07 2.1E-11 73.0 6.2 54 93-146 39-106 (279)
280 3ua3_A Protein arginine N-meth 98.3 2.1E-07 7E-12 83.9 3.6 84 97-180 410-530 (745)
281 3lkz_A Non-structural protein 98.3 4.6E-06 1.6E-10 67.6 11.0 97 88-187 86-207 (321)
282 2qy6_A UPF0209 protein YFCK; s 98.3 4.6E-07 1.6E-11 72.9 4.9 104 95-204 59-227 (257)
283 1qyr_A KSGA, high level kasuga 98.3 4.3E-07 1.5E-11 72.8 4.5 62 93-155 18-97 (252)
284 3p8z_A Mtase, non-structural p 98.3 7.7E-06 2.6E-10 64.3 10.6 102 93-197 75-199 (267)
285 2oyr_A UPF0341 protein YHIQ; a 98.2 2.3E-07 7.8E-12 74.7 1.2 84 94-178 84-194 (258)
286 1m6e_X S-adenosyl-L-methionnin 98.2 3E-06 1E-10 71.2 7.5 95 95-189 50-214 (359)
287 1m6y_A S-adenosyl-methyltransf 98.2 3.2E-07 1.1E-11 75.5 1.3 63 93-155 23-105 (301)
288 3lkd_A Type I restriction-modi 98.2 3.9E-06 1.3E-10 74.2 8.4 108 95-202 220-379 (542)
289 3khk_A Type I restriction-modi 98.2 4.3E-06 1.5E-10 74.1 8.0 106 98-203 246-418 (544)
290 3cvo_A Methyltransferase-like 98.1 7.2E-06 2.5E-10 63.5 6.9 82 95-182 29-152 (202)
291 3s1s_A Restriction endonucleas 98.0 8.4E-06 2.9E-10 74.6 7.5 110 95-204 320-490 (878)
292 3ll7_A Putative methyltransfer 97.9 1.6E-06 5.6E-11 74.0 1.0 60 95-155 92-170 (410)
293 3c6k_A Spermine synthase; sper 97.9 2E-05 6.7E-10 66.5 7.0 93 95-187 204-334 (381)
294 3r24_A NSP16, 2'-O-methyl tran 97.8 3.4E-05 1.2E-09 62.5 7.0 118 81-201 93-235 (344)
295 2wk1_A NOVP; transferase, O-me 97.8 8.4E-05 2.9E-09 60.4 8.2 88 95-183 105-243 (282)
296 3ufb_A Type I restriction-modi 97.3 0.00075 2.6E-08 59.5 8.9 110 95-204 216-386 (530)
297 2vz8_A Fatty acid synthase; tr 97.2 0.00032 1.1E-08 71.9 5.2 90 95-184 1239-1348(2512)
298 2zig_A TTHA0409, putative modi 97.0 0.00037 1.2E-08 56.8 3.2 38 95-133 234-271 (297)
299 1wg8_A Predicted S-adenosylmet 96.9 0.00093 3.2E-08 54.0 4.9 61 93-154 19-95 (285)
300 3vyw_A MNMC2; tRNA wobble urid 96.8 0.0031 1.1E-07 51.6 7.0 104 95-204 95-240 (308)
301 2dph_A Formaldehyde dismutase; 95.9 0.016 5.6E-07 48.8 6.8 93 91-183 180-298 (398)
302 1f8f_A Benzyl alcohol dehydrog 95.7 0.011 3.9E-07 49.2 5.0 92 88-184 182-289 (371)
303 1g60_A Adenine-specific methyl 95.6 0.014 4.7E-07 46.4 5.0 38 94-132 210-247 (260)
304 2oo3_A Protein involved in cat 95.6 0.0076 2.6E-07 48.7 3.3 108 96-204 91-218 (283)
305 2hwk_A Helicase NSP2; rossman 94.9 0.046 1.6E-06 44.0 5.8 88 120-208 179-279 (320)
306 1kol_A Formaldehyde dehydrogen 94.9 0.023 7.8E-07 47.8 4.3 92 92-183 181-299 (398)
307 4ej6_A Putative zinc-binding d 94.8 0.031 1.1E-06 46.6 4.9 90 90-184 176-284 (370)
308 3two_A Mannitol dehydrogenase; 94.6 0.051 1.8E-06 44.7 5.8 83 93-184 173-265 (348)
309 1pl8_A Human sorbitol dehydrog 94.5 0.015 5E-07 48.3 2.3 89 91-184 166-273 (356)
310 3ubt_Y Modification methylase 94.5 0.19 6.6E-06 40.9 8.9 105 98-204 1-135 (331)
311 2c7p_A Modification methylase 94.4 0.11 3.9E-06 42.6 7.4 106 97-204 11-145 (327)
312 1g55_A DNA cytosine methyltran 94.4 0.027 9.3E-07 46.7 3.6 106 97-204 2-141 (343)
313 3goh_A Alcohol dehydrogenase, 94.2 0.087 3E-06 42.7 6.2 84 90-184 136-229 (315)
314 1cdo_A Alcohol dehydrogenase; 94.1 0.059 2E-06 44.8 5.1 91 88-183 184-293 (374)
315 3uko_A Alcohol dehydrogenase c 94.1 0.15 5.3E-06 42.4 7.6 92 88-184 185-295 (378)
316 3gms_A Putative NADPH:quinone 94.0 0.14 4.8E-06 41.9 7.2 91 87-184 135-243 (340)
317 1boo_A Protein (N-4 cytosine-s 94.0 0.066 2.2E-06 43.9 5.1 73 132-204 15-112 (323)
318 2jhf_A Alcohol dehydrogenase E 93.9 0.07 2.4E-06 44.4 5.1 91 88-183 183-292 (374)
319 1p0f_A NADP-dependent alcohol 93.8 0.062 2.1E-06 44.7 4.7 92 88-184 183-293 (373)
320 3s2e_A Zinc-containing alcohol 93.8 0.034 1.2E-06 45.7 2.9 87 91-183 161-262 (340)
321 1e3i_A Alcohol dehydrogenase, 93.8 0.074 2.5E-06 44.3 5.0 91 88-183 187-296 (376)
322 3fpc_A NADP-dependent alcohol 93.7 0.036 1.2E-06 45.8 2.9 89 90-183 160-265 (352)
323 3g7u_A Cytosine-specific methy 93.6 0.038 1.3E-06 46.5 3.0 58 98-155 3-78 (376)
324 1pqw_A Polyketide synthase; ro 93.6 0.089 3E-06 39.4 4.8 88 90-184 32-137 (198)
325 1i4w_A Mitochondrial replicati 93.5 0.1 3.5E-06 43.5 5.4 47 96-142 58-117 (353)
326 2fzw_A Alcohol dehydrogenase c 93.3 0.067 2.3E-06 44.4 4.0 92 88-184 182-292 (373)
327 3tka_A Ribosomal RNA small sub 93.2 0.04 1.4E-06 45.6 2.4 40 93-132 54-95 (347)
328 3trk_A Nonstructural polyprote 93.2 0.06 2.1E-06 42.9 3.2 63 147-209 210-285 (324)
329 3uog_A Alcohol dehydrogenase; 93.1 0.071 2.4E-06 44.2 3.8 91 87-184 180-287 (363)
330 2zig_A TTHA0409, putative modi 92.8 0.066 2.3E-06 43.3 3.1 55 132-186 22-99 (297)
331 3pvc_A TRNA 5-methylaminomethy 92.6 0.14 5E-06 46.2 5.5 104 95-204 57-225 (689)
332 3tos_A CALS11; methyltransfera 92.6 0.65 2.2E-05 36.9 8.6 109 95-204 68-239 (257)
333 3m6i_A L-arabinitol 4-dehydrog 92.2 0.058 2E-06 44.6 2.2 90 90-184 173-283 (363)
334 3jv7_A ADH-A; dehydrogenase, n 92.1 0.082 2.8E-06 43.4 2.9 88 92-184 167-270 (345)
335 2b5w_A Glucose dehydrogenase; 92.0 0.22 7.7E-06 41.0 5.5 86 93-184 163-273 (357)
336 1e3j_A NADP(H)-dependent ketos 91.7 0.072 2.5E-06 43.9 2.2 88 91-184 163-271 (352)
337 4b7c_A Probable oxidoreductase 91.7 0.066 2.3E-06 43.8 1.9 93 85-184 138-248 (336)
338 3ip1_A Alcohol dehydrogenase, 91.6 0.48 1.6E-05 39.8 7.2 88 93-184 210-318 (404)
339 1rjw_A ADH-HT, alcohol dehydro 91.1 0.16 5.4E-06 41.6 3.6 86 93-184 161-261 (339)
340 4gua_A Non-structural polyprot 91.1 0.2 6.9E-06 44.0 4.3 64 146-209 219-295 (670)
341 2dq4_A L-threonine 3-dehydroge 91.1 0.17 5.9E-06 41.4 3.9 87 91-183 160-261 (343)
342 4eye_A Probable oxidoreductase 91.1 0.3 1E-05 40.0 5.3 91 86-184 149-257 (342)
343 1uuf_A YAHK, zinc-type alcohol 91.0 0.21 7.2E-06 41.5 4.4 84 93-183 191-287 (369)
344 2py6_A Methyltransferase FKBM; 90.9 0.25 8.5E-06 41.9 4.7 37 94-130 224-263 (409)
345 4h0n_A DNMT2; SAH binding, tra 90.8 0.3 1E-05 40.3 4.9 106 97-204 3-141 (333)
346 1v3u_A Leukotriene B4 12- hydr 90.7 0.11 3.8E-06 42.3 2.3 90 88-184 137-244 (333)
347 1yb5_A Quinone oxidoreductase; 90.4 0.46 1.6E-05 39.1 5.9 91 87-184 161-269 (351)
348 2d8a_A PH0655, probable L-thre 90.2 0.21 7.2E-06 41.0 3.6 88 91-184 163-267 (348)
349 1boo_A Protein (N-4 cytosine-s 90.0 0.25 8.4E-06 40.5 3.8 40 94-134 250-289 (323)
350 3ps9_A TRNA 5-methylaminomethy 89.9 0.55 1.9E-05 42.2 6.4 53 146-204 177-233 (676)
351 1vj0_A Alcohol dehydrogenase, 89.9 0.063 2.1E-06 44.9 0.1 88 92-184 190-298 (380)
352 1g60_A Adenine-specific methyl 89.7 0.33 1.1E-05 38.3 4.3 51 134-184 7-74 (260)
353 4dvj_A Putative zinc-dependent 89.5 0.31 1.1E-05 40.3 4.1 83 96-183 171-269 (363)
354 1iz0_A Quinone oxidoreductase; 88.9 0.18 6E-06 40.6 2.1 82 94-183 123-217 (302)
355 1eg2_A Modification methylase 88.9 0.39 1.3E-05 39.3 4.2 35 94-129 240-274 (319)
356 3qv2_A 5-cytosine DNA methyltr 88.8 0.19 6.3E-06 41.4 2.2 110 95-204 8-152 (327)
357 3qwb_A Probable quinone oxidor 88.6 0.5 1.7E-05 38.5 4.7 88 90-184 142-247 (334)
358 2eih_A Alcohol dehydrogenase; 88.2 0.57 2E-05 38.3 4.9 86 92-184 162-265 (343)
359 2h6e_A ADH-4, D-arabinose 1-de 88.1 0.085 2.9E-06 43.3 -0.3 85 93-184 168-269 (344)
360 2hcy_A Alcohol dehydrogenase 1 87.8 0.24 8.4E-06 40.6 2.4 86 93-184 166-269 (347)
361 2c0c_A Zinc binding alcohol de 87.8 0.85 2.9E-05 37.6 5.7 87 91-184 158-261 (362)
362 2j3h_A NADP-dependent oxidored 87.7 0.39 1.3E-05 39.2 3.5 91 86-183 145-254 (345)
363 2uyo_A Hypothetical protein ML 87.6 5.4 0.00018 32.3 10.3 89 97-187 103-221 (310)
364 1eg2_A Modification methylase 87.6 0.79 2.7E-05 37.4 5.3 52 136-187 44-109 (319)
365 3jyn_A Quinone oxidoreductase; 87.6 0.48 1.6E-05 38.4 4.0 91 88-185 132-240 (325)
366 1qor_A Quinone oxidoreductase; 86.6 0.61 2.1E-05 37.7 4.1 87 91-184 135-239 (327)
367 1jvb_A NAD(H)-dependent alcoho 86.4 0.24 8.3E-06 40.6 1.6 87 92-184 166-271 (347)
368 4a2c_A Galactitol-1-phosphate 86.2 1.5 5.3E-05 35.5 6.3 91 90-185 154-261 (346)
369 1rjd_A PPM1P, carboxy methyl t 86.0 12 0.00041 30.5 11.6 88 95-183 96-231 (334)
370 1wly_A CAAR, 2-haloacrylate re 85.8 1.1 3.6E-05 36.4 5.1 90 88-184 137-244 (333)
371 4eez_A Alcohol dehydrogenase 1 85.5 1 3.5E-05 36.7 4.9 90 91-185 158-264 (348)
372 2j8z_A Quinone oxidoreductase; 85.4 1.3 4.4E-05 36.3 5.5 88 90-184 156-261 (354)
373 2qrv_A DNA (cytosine-5)-methyl 85.3 0.28 9.4E-06 39.8 1.3 61 95-155 14-90 (295)
374 3fwz_A Inner membrane protein 85.1 1.8 6.1E-05 30.3 5.5 83 97-184 7-105 (140)
375 3fbg_A Putative arginate lyase 84.8 0.72 2.5E-05 37.7 3.7 82 96-183 150-247 (346)
376 1xa0_A Putative NADPH dependen 84.6 0.51 1.8E-05 38.2 2.7 84 93-183 145-245 (328)
377 2km1_A Protein DRE2; yeast, an 84.5 0.46 1.6E-05 33.9 2.0 40 143-182 54-96 (136)
378 2zb4_A Prostaglandin reductase 84.1 1.4 4.7E-05 36.1 5.1 88 90-183 152-259 (357)
379 4dup_A Quinone oxidoreductase; 84.1 0.59 2E-05 38.4 2.9 91 87-184 158-265 (353)
380 2cdc_A Glucose dehydrogenase g 82.5 1 3.5E-05 37.1 3.7 79 97-184 181-278 (366)
381 1tt7_A YHFP; alcohol dehydroge 81.9 0.67 2.3E-05 37.5 2.3 85 93-184 146-247 (330)
382 3nx4_A Putative oxidoreductase 81.4 1.2 4E-05 36.0 3.6 79 99-184 149-241 (324)
383 3krt_A Crotonyl COA reductase; 80.9 1.2 4.3E-05 37.9 3.7 86 92-184 224-344 (456)
384 3llv_A Exopolyphosphatase-rela 80.8 9 0.00031 26.4 7.8 56 97-155 6-77 (141)
385 2cf5_A Atccad5, CAD, cinnamyl 80.1 0.82 2.8E-05 37.6 2.3 86 93-184 176-275 (357)
386 3c85_A Putative glutathione-re 79.8 6.3 0.00022 28.6 7.0 83 97-184 39-139 (183)
387 3l9w_A Glutathione-regulated p 78.5 6.4 0.00022 33.2 7.4 85 96-185 3-103 (413)
388 2raf_A Putative dinucleotide-b 77.9 10 0.00035 28.4 7.8 68 96-184 18-89 (209)
389 3ius_A Uncharacterized conserv 77.4 22 0.00076 27.3 10.8 53 98-155 6-70 (286)
390 1zsy_A Mitochondrial 2-enoyl t 75.7 9.8 0.00034 30.9 7.7 88 90-183 161-269 (357)
391 1id1_A Putative potassium chan 75.7 11 0.00038 26.4 7.1 84 97-185 3-106 (153)
392 1yqd_A Sinapyl alcohol dehydro 75.6 1.4 4.7E-05 36.4 2.4 86 93-184 183-282 (366)
393 2g1u_A Hypothetical protein TM 74.6 18 0.00063 25.3 8.1 86 95-185 17-119 (155)
394 1wg8_A Predicted S-adenosylmet 73.1 1.9 6.6E-05 34.6 2.5 44 157-202 205-249 (285)
395 3iht_A S-adenosyl-L-methionine 73.0 4.6 0.00016 29.6 4.2 85 95-180 39-143 (174)
396 3gaz_A Alcohol dehydrogenase s 72.9 1.9 6.5E-05 35.1 2.6 88 88-184 142-246 (343)
397 3gqv_A Enoyl reductase; medium 72.5 3.5 0.00012 34.0 4.1 82 95-183 163-262 (371)
398 4gbj_A 6-phosphogluconate dehy 71.5 5 0.00017 32.1 4.7 102 99-204 7-116 (297)
399 4a27_A Synaptic vesicle membra 71.3 4.4 0.00015 33.0 4.5 89 88-184 134-238 (349)
400 4a0s_A Octenoyl-COA reductase/ 70.7 1.9 6.5E-05 36.5 2.1 86 92-184 216-336 (447)
401 3tqh_A Quinone oxidoreductase; 70.3 2.7 9.2E-05 33.8 2.9 86 90-183 146-244 (321)
402 3orf_A Dihydropteridine reduct 68.6 30 0.001 26.3 8.6 88 97-186 22-146 (251)
403 3tka_A Ribosomal RNA small sub 67.4 3 0.0001 34.4 2.6 42 157-200 246-288 (347)
404 2vn8_A Reticulon-4-interacting 66.9 4.5 0.00015 33.3 3.6 85 94-184 181-280 (375)
405 3ew7_A LMO0794 protein; Q8Y8U8 66.9 34 0.0012 24.9 9.0 85 98-184 1-102 (221)
406 1lss_A TRK system potassium up 66.7 24 0.00082 23.7 7.0 81 97-183 4-101 (140)
407 3gpi_A NAD-dependent epimerase 65.7 43 0.0015 25.7 10.3 56 97-155 3-70 (286)
408 1zkd_A DUF185; NESG, RPR58, st 65.1 10 0.00035 31.8 5.4 36 95-130 79-122 (387)
409 4eso_A Putative oxidoreductase 64.7 5.2 0.00018 30.9 3.4 89 96-186 7-140 (255)
410 3g17_A Similar to 2-dehydropan 64.3 3.9 0.00013 32.5 2.7 88 98-189 3-101 (294)
411 3ggo_A Prephenate dehydrogenas 63.7 34 0.0011 27.4 8.2 97 97-200 33-143 (314)
412 1ks9_A KPA reductase;, 2-dehyd 63.5 7.5 0.00026 30.3 4.2 83 99-186 2-99 (291)
413 4e4y_A Short chain dehydrogena 63.5 20 0.00068 27.1 6.6 90 96-186 3-128 (244)
414 3ijr_A Oxidoreductase, short c 62.3 16 0.00053 28.8 5.9 88 96-185 46-183 (291)
415 3qha_A Putative oxidoreductase 62.2 16 0.00054 28.9 5.9 101 97-203 15-123 (296)
416 2ew2_A 2-dehydropantoate 2-red 61.3 4.3 0.00015 32.1 2.4 98 98-202 4-124 (316)
417 3mag_A VP39; methylated adenin 60.8 19 0.00065 29.0 6.0 35 96-130 60-99 (307)
418 3l4b_C TRKA K+ channel protien 60.2 32 0.0011 25.5 7.1 79 99-182 2-97 (218)
419 4fgs_A Probable dehydrogenase 58.2 6.8 0.00023 31.1 3.1 90 96-186 28-161 (273)
420 2duw_A Putative COA-binding pr 58.2 32 0.0011 24.1 6.5 97 96-204 12-118 (145)
421 3oh8_A Nucleoside-diphosphate 58.0 88 0.003 26.7 10.8 57 97-155 147-208 (516)
422 3h2s_A Putative NADH-flavin re 57.8 36 0.0012 24.9 7.1 85 98-184 1-104 (224)
423 3i83_A 2-dehydropantoate 2-red 57.4 27 0.00094 27.8 6.7 102 98-204 3-123 (320)
424 2y0c_A BCEC, UDP-glucose dehyd 57.3 8.7 0.0003 33.0 3.8 102 95-200 6-143 (478)
425 3oig_A Enoyl-[acyl-carrier-pro 57.2 46 0.0016 25.3 7.8 90 96-186 6-149 (266)
426 4gx0_A TRKA domain protein; me 57.2 63 0.0022 27.9 9.4 85 98-187 349-445 (565)
427 3pi7_A NADH oxidoreductase; gr 57.2 8.7 0.0003 31.1 3.6 82 95-184 162-263 (349)
428 3me5_A Cytosine-specific methy 56.9 7.7 0.00026 33.5 3.3 36 96-131 87-122 (482)
429 3pxx_A Carveol dehydrogenase; 56.6 22 0.00076 27.5 5.9 88 96-185 9-154 (287)
430 4imr_A 3-oxoacyl-(acyl-carrier 56.6 42 0.0014 26.0 7.5 58 96-155 32-116 (275)
431 4e21_A 6-phosphogluconate dehy 56.3 5.4 0.00018 33.0 2.2 102 96-203 21-133 (358)
432 3dqp_A Oxidoreductase YLBE; al 55.1 24 0.00083 26.0 5.6 56 98-155 1-70 (219)
433 3gvx_A Glycerate dehydrogenase 54.1 7.2 0.00025 31.2 2.6 101 96-203 121-227 (290)
434 3slk_A Polyketide synthase ext 53.8 7.3 0.00025 35.8 2.9 86 90-183 339-441 (795)
435 3is3_A 17BETA-hydroxysteroid d 53.8 36 0.0012 26.2 6.6 89 96-186 17-154 (270)
436 2aef_A Calcium-gated potassium 53.7 67 0.0023 24.0 9.4 88 95-186 7-107 (234)
437 3v2g_A 3-oxoacyl-[acyl-carrier 53.2 45 0.0015 25.7 7.1 89 96-185 30-166 (271)
438 4a7p_A UDP-glucose dehydrogena 52.8 19 0.00064 30.7 5.1 103 95-201 6-145 (446)
439 1m6y_A S-adenosyl-methyltransf 52.8 5.1 0.00018 32.3 1.5 42 157-200 217-259 (301)
440 4f3n_A Uncharacterized ACR, CO 52.6 32 0.0011 29.2 6.4 35 97-131 138-178 (432)
441 3i6i_A Putative leucoanthocyan 52.6 31 0.0011 27.5 6.3 58 97-156 10-91 (346)
442 1piw_A Hypothetical zinc-type 51.5 12 0.00041 30.5 3.6 87 92-183 175-275 (360)
443 3qy9_A DHPR, dihydrodipicolina 50.3 68 0.0023 24.7 7.6 92 98-203 4-102 (243)
444 4f6c_A AUSA reductase domain p 50.3 46 0.0016 27.4 7.1 59 95-155 67-157 (427)
445 2f1k_A Prephenate dehydrogenas 49.4 26 0.0009 27.0 5.2 76 99-180 2-87 (279)
446 4f6l_B AUSA reductase domain p 48.6 56 0.0019 27.7 7.6 59 95-155 148-238 (508)
447 3grk_A Enoyl-(acyl-carrier-pro 48.3 78 0.0027 24.7 7.9 90 96-186 30-171 (293)
448 3p2y_A Alanine dehydrogenase/p 48.0 4.9 0.00017 33.6 0.7 85 96-183 183-301 (381)
449 3ojo_A CAP5O; rossmann fold, c 48.0 16 0.00055 31.0 3.9 99 95-197 9-141 (431)
450 3ko8_A NAD-dependent epimerase 47.9 61 0.0021 25.0 7.2 55 98-155 1-69 (312)
451 3c24_A Putative oxidoreductase 47.8 12 0.00042 29.3 3.0 77 98-179 12-96 (286)
452 3hwr_A 2-dehydropantoate 2-red 47.5 15 0.00052 29.4 3.6 97 95-200 17-134 (318)
453 2pv7_A T-protein [includes: ch 46.7 13 0.00045 29.5 3.0 68 98-179 22-94 (298)
454 4e12_A Diketoreductase; oxidor 46.0 4.4 0.00015 32.0 0.1 97 98-200 5-134 (283)
455 3r3s_A Oxidoreductase; structu 45.7 36 0.0012 26.7 5.5 89 96-186 48-187 (294)
456 3e8x_A Putative NAD-dependent 45.5 43 0.0015 24.9 5.7 58 96-155 20-91 (236)
457 2g5c_A Prephenate dehydrogenas 45.1 17 0.00058 28.2 3.4 97 99-200 3-111 (281)
458 1y1p_A ARII, aldehyde reductas 44.8 61 0.0021 25.3 6.8 59 95-155 9-90 (342)
459 4dcm_A Ribosomal RNA large sub 44.8 56 0.0019 26.8 6.7 82 96-185 38-137 (375)
460 1wma_A Carbonyl reductase [NAD 44.7 38 0.0013 25.6 5.4 88 96-185 3-139 (276)
461 3evt_A Phosphoglycerate dehydr 44.6 12 0.00042 30.3 2.6 101 96-204 136-246 (324)
462 2cvz_A Dehydrogenase, 3-hydrox 44.1 27 0.00093 27.0 4.5 97 99-202 3-107 (289)
463 1ej6_A Lambda2; icosahedral, n 44.0 63 0.0022 30.9 7.3 92 94-186 819-928 (1289)
464 3ksu_A 3-oxoacyl-acyl carrier 43.6 39 0.0013 25.9 5.3 88 96-185 10-148 (262)
465 4id9_A Short-chain dehydrogena 43.6 42 0.0014 26.6 5.7 59 95-155 17-84 (347)
466 3k96_A Glycerol-3-phosphate de 42.8 8.5 0.00029 31.7 1.3 84 97-185 29-134 (356)
467 3hn2_A 2-dehydropantoate 2-red 42.7 43 0.0015 26.5 5.6 100 98-204 3-121 (312)
468 2yjg_A Lactate racemase apopro 48.4 5.3 0.00018 34.1 0.0 52 147-198 275-331 (436)
469 3g0o_A 3-hydroxyisobutyrate de 42.3 14 0.00047 29.4 2.5 98 97-202 7-119 (303)
470 3uce_A Dehydrogenase; rossmann 42.1 24 0.00083 26.2 3.8 83 96-186 5-118 (223)
471 3u5t_A 3-oxoacyl-[acyl-carrier 41.6 55 0.0019 25.2 5.9 90 95-185 25-162 (267)
472 1zcj_A Peroxisomal bifunctiona 41.4 9.6 0.00033 32.5 1.5 82 97-181 37-147 (463)
473 3ruf_A WBGU; rossmann fold, UD 40.9 55 0.0019 25.9 6.0 58 96-155 24-107 (351)
474 2b69_A UDP-glucuronate decarbo 40.7 80 0.0027 24.8 7.0 56 96-155 26-98 (343)
475 3d1l_A Putative NADP oxidoredu 40.5 9.4 0.00032 29.5 1.2 80 97-183 10-101 (266)
476 3e48_A Putative nucleoside-dip 40.4 74 0.0025 24.3 6.6 55 99-155 2-72 (289)
477 1dxy_A D-2-hydroxyisocaproate 40.4 32 0.0011 27.9 4.5 98 96-204 144-252 (333)
478 1rpn_A GDP-mannose 4,6-dehydra 40.0 53 0.0018 25.7 5.7 59 95-155 12-93 (335)
479 3dfu_A Uncharacterized protein 40.0 1.2E+02 0.0042 23.1 8.0 67 96-182 5-73 (232)
480 4e2x_A TCAB9; kijanose, tetron 39.3 1.1E+02 0.0039 24.9 7.9 85 95-186 317-412 (416)
481 1y81_A Conserved hypothetical 38.9 90 0.0031 21.5 6.2 98 95-204 12-117 (138)
482 1qsg_A Enoyl-[acyl-carrier-pro 38.9 1.2E+02 0.0043 22.8 9.0 59 96-155 8-94 (265)
483 3pp8_A Glyoxylate/hydroxypyruv 38.3 9.2 0.00031 31.0 0.8 103 96-204 138-248 (315)
484 3k5p_A D-3-phosphoglycerate de 38.2 49 0.0017 27.9 5.3 104 96-204 155-263 (416)
485 4dgs_A Dehydrogenase; structur 38.0 31 0.0011 28.2 4.0 100 96-202 170-275 (340)
486 1lnq_A MTHK channels, potassiu 37.7 1.3E+02 0.0044 23.8 7.7 86 96-185 114-212 (336)
487 3vps_A TUNA, NAD-dependent epi 37.3 29 0.00098 27.0 3.7 32 97-130 7-42 (321)
488 2g76_A 3-PGDH, D-3-phosphoglyc 37.2 12 0.00041 30.6 1.4 103 95-203 163-273 (335)
489 3pef_A 6-phosphogluconate dehy 37.1 20 0.00069 28.0 2.7 100 98-202 2-112 (287)
490 4g65_A TRK system potassium up 37.0 16 0.00055 31.2 2.2 56 96-154 2-74 (461)
491 1txg_A Glycerol-3-phosphate de 37.0 4.7 0.00016 32.3 -1.1 97 99-201 2-124 (335)
492 3sxp_A ADP-L-glycero-D-mannohe 36.8 1.6E+02 0.0053 23.3 8.5 58 96-155 9-97 (362)
493 1mv8_A GMD, GDP-mannose 6-dehy 36.7 35 0.0012 28.6 4.3 31 99-132 2-36 (436)
494 2cuk_A Glycerate dehydrogenase 36.7 15 0.00052 29.5 1.9 96 96-200 143-244 (311)
495 3ba1_A HPPR, hydroxyphenylpyru 36.5 18 0.00063 29.4 2.4 100 96-202 163-268 (333)
496 3iyl_W VP1; non-enveloped viru 35.3 49 0.0017 31.8 5.1 88 97-186 828-935 (1299)
497 4hy3_A Phosphoglycerate oxidor 35.1 16 0.00054 30.3 1.8 102 97-204 176-285 (365)
498 2vz8_A Fatty acid synthase; tr 35.0 18 0.00063 37.6 2.6 90 87-183 1658-1769(2512)
499 2dpo_A L-gulonate 3-dehydrogen 34.5 10 0.00036 30.7 0.6 97 98-199 7-135 (319)
500 3k6j_A Protein F01G10.3, confi 34.5 73 0.0025 27.2 5.9 78 97-180 54-162 (460)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.79 E-value=2.4e-19 Score=145.14 Aligned_cols=92 Identities=17% Similarity=0.169 Sum_probs=83.3
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC---------cEEEcCCCCCCCCCCceeeEEcccchhhhCHHH
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP---------LVSRADPHNLPFFDEAFDVAFTAHLAEALFPSR 165 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~---------~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~ 165 (209)
..+.+|||+|||+|..+..+++.+. +|+|+|+|+.|+ .++++|++++++++++||+|++..+.|+.++.+
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~~ 116 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLDR 116 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCHHH
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhhHHH
Confidence 5567999999999999999999864 999999998755 388999999999999999999998888889999
Q ss_pred HHHHHHHhcccCcEEEEEEecC
Q 028410 166 FVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 166 ~l~~~~r~LkpgG~lil~~~~~ 187 (209)
+++++.|+|||||.+++.....
T Consensus 117 ~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 117 FWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp HHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHcCCCCEEEEEECCC
Confidence 9999999999999998887654
No 2
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.74 E-value=2.3e-17 Score=132.85 Aligned_cols=92 Identities=28% Similarity=0.437 Sum_probs=81.6
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC---------------CcEEEcCCCCCCCCCCceeeEEcccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAFTAHL 157 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~i~~~~~ 157 (209)
...++.+|||+|||+|..+..+++.+. +|+|+|+|+.+ +.+.++|+.++|+++++||+|+++.+
T Consensus 34 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~ 112 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIA 112 (260)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESC
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhh
Confidence 446889999999999999999998754 99999999853 45889999999999999999999988
Q ss_pred hhhh-CHHHHHHHHHHhcccCcEEEEEEe
Q 028410 158 AEAL-FPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 158 ~~~~-~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
.+++ ++..+++++.++|||||++++...
T Consensus 113 l~~~~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 113 AHHFPNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 8888 999999999999999999988743
No 3
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.73 E-value=1.4e-17 Score=130.41 Aligned_cols=113 Identities=18% Similarity=0.220 Sum_probs=97.2
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCCC---------------CcEEEcCCCCCCCCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
...++.+|||+|||+|..+..+++. +..+++|+|+|+.+ +.+..+|+.++++++++||+|++.
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 113 (219)
T 3dh0_A 34 GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMA 113 (219)
T ss_dssp TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEE
T ss_pred CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEee
Confidence 4578899999999999999999985 34699999999863 458899999999999999999999
Q ss_pred cchhhh-CHHHHHHHHHHhcccCcEEEEEEecCC----------cccHHHHHHHhcccccc
Q 028410 156 HLAEAL-FPSRFVGEMERTVKIGGVCMVLMEECA----------GREIKQIVELFRTSSFT 205 (209)
Q Consensus 156 ~~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~~----------~~~~~~~~~l~~~~~~~ 205 (209)
.+.++. ++..+++++.++|||||.+++...... .....++.+++.++||.
T Consensus 114 ~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 174 (219)
T 3dh0_A 114 FTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIR 174 (219)
T ss_dssp SCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCE
T ss_pred hhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCE
Confidence 998888 899999999999999999998864422 24578889999999884
No 4
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.72 E-value=6.6e-18 Score=131.73 Aligned_cols=91 Identities=15% Similarity=0.169 Sum_probs=80.2
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTAH 156 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~~~ 156 (209)
..+++ +|||+|||+|..+..+++.+..+++|+|+++.+ +.+.++|+.++++++++||+|++..
T Consensus 41 ~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 119 (219)
T 3dlc_A 41 GITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRG 119 (219)
T ss_dssp CCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEES
T ss_pred CCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECc
Confidence 44555 999999999999999998644599999999753 4588999999999999999999999
Q ss_pred chhhh-CHHHHHHHHHHhcccCcEEEEEE
Q 028410 157 LAEAL-FPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 157 ~~~~~-~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
+.++. ++..+++++.++|||||.+++..
T Consensus 120 ~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 120 SVFFWEDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hHhhccCHHHHHHHHHHhCCCCCEEEEEe
Confidence 88888 99999999999999999988874
No 5
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=1.5e-17 Score=133.38 Aligned_cols=99 Identities=17% Similarity=0.213 Sum_probs=85.0
Q ss_pred HHHhcccCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC----------CcEEEcCCCCCCCCCCceeeEEcc
Q 028410 87 HLQGKSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----------PLVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 87 ~l~~~~~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~----------~~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
.+.......++.+|||+|||+|..+..+++. +..+++|+|+|+.+ +.+..+|+.+++ ++++||+|+++
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~ 102 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYAN 102 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEE
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEe
Confidence 3444445578899999999999999999985 44699999999764 458899999988 78999999999
Q ss_pred cchhhh-CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 156 HLAEAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 156 ~~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
.+.+++ ++..+++++.++|||||.+++.+..
T Consensus 103 ~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 103 AVFQWVPDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp SCGGGSTTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred CchhhCCCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 999988 9999999999999999999988753
No 6
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.72 E-value=3.5e-17 Score=131.15 Aligned_cols=93 Identities=16% Similarity=0.239 Sum_probs=83.2
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCC------------CCcEEEcCCCCCCCCCCceeeEEcccchhh
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS------------LPLVSRADPHNLPFFDEAFDVAFTAHLAEA 160 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~------------~~~~~~~d~~~~~~~~~~fD~i~~~~~~~~ 160 (209)
...++.+|||+|||+|..+..+++.+..+|+|+|+|+. .+.++++|+.++++++++||+|++..+.++
T Consensus 41 ~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 120 (253)
T 3g5l_A 41 PDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHY 120 (253)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGG
T ss_pred hccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhh
Confidence 34578999999999999999999986669999999985 345889999999998999999999999988
Q ss_pred h-CHHHHHHHHHHhcccCcEEEEEEe
Q 028410 161 L-FPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 161 ~-~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
+ ++..+++++.++|||||.+++.+.
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 121 IASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 8 999999999999999999998753
No 7
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.72 E-value=3.7e-17 Score=132.15 Aligned_cols=113 Identities=19% Similarity=0.227 Sum_probs=95.7
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTAH 156 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~~~ 156 (209)
.+.++.+|||+|||+|..+..+++.+..+|+|+|+|+.+ +.++++|+.++++++++||+|++..
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 43 NLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEG 122 (267)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESS
T ss_pred cCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcC
Confidence 357899999999999999999999866699999999862 5689999999999899999999999
Q ss_pred chhhhCHHHHHHHHHHhcccCcEEEEEEecC------------------CcccHHHHHHHhcccccc
Q 028410 157 LAEALFPSRFVGEMERTVKIGGVCMVLMEEC------------------AGREIKQIVELFRTSSFT 205 (209)
Q Consensus 157 ~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~------------------~~~~~~~~~~l~~~~~~~ 205 (209)
+.+++++..+++++.++|||||++++..... .......+.+++.++||.
T Consensus 123 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 189 (267)
T 3kkz_A 123 AIYNIGFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYL 189 (267)
T ss_dssp CGGGTCHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEE
T ss_pred CceecCHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCE
Confidence 8888899999999999999999999886431 112455677777888774
No 8
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.72 E-value=2.3e-17 Score=131.03 Aligned_cols=111 Identities=21% Similarity=0.322 Sum_probs=95.6
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC------------CcEEEcCCCCCCCCCCceeeEEcccchhhh
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL------------PLVSRADPHNLPFFDEAFDVAFTAHLAEAL 161 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~------------~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~ 161 (209)
+.++.+|||+|||+|..+..+++.+. +++|+|+++.+ +.++++|+.++++++++||+|++.++.+|+
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 129 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT 129 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhc
Confidence 36889999999999999999999865 99999999863 458899999999999999999999999988
Q ss_pred -CHHHHHHHHHHhcccCcEEEEEEecCCc-------------------ccHHHHHHHhcccccc
Q 028410 162 -FPSRFVGEMERTVKIGGVCMVLMEECAG-------------------REIKQIVELFRTSSFT 205 (209)
Q Consensus 162 -~~~~~l~~~~r~LkpgG~lil~~~~~~~-------------------~~~~~~~~l~~~~~~~ 205 (209)
++..+++++.++|||||.+++.+..... .....+.+++.++||.
T Consensus 130 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 193 (242)
T 3l8d_A 130 EEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFK 193 (242)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEE
T ss_pred cCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCE
Confidence 9999999999999999999998754321 3446788888888884
No 9
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.71 E-value=6.5e-17 Score=133.86 Aligned_cols=111 Identities=14% Similarity=0.165 Sum_probs=95.4
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEccc
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTAH 156 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~~~ 156 (209)
+.++.+|||+|||+|..+..+++. +. +|+|+|+++.+ +.++.+|+.++++++++||+|++..
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE 193 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECC
Confidence 678999999999999999999986 64 99999999863 4588999999999999999999999
Q ss_pred chhhhCHHHHHHHHHHhcccCcEEEEEEecCCc--------------------ccHHHHHHHhcccccc
Q 028410 157 LAEALFPSRFVGEMERTVKIGGVCMVLMEECAG--------------------REIKQIVELFRTSSFT 205 (209)
Q Consensus 157 ~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~--------------------~~~~~~~~l~~~~~~~ 205 (209)
+.++.++..+++++.++|||||++++....... .....+.++++++||.
T Consensus 194 ~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~ 262 (312)
T 3vc1_A 194 STMYVDLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLV 262 (312)
T ss_dssp CGGGSCHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEE
T ss_pred chhhCCHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCE
Confidence 988889999999999999999999988754322 2456677888888884
No 10
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.71 E-value=4.5e-17 Score=130.55 Aligned_cols=113 Identities=19% Similarity=0.269 Sum_probs=94.9
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTAH 156 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~~~ 156 (209)
.+.++.+|||+|||+|..+..+++.+..+|+|+|+|+.+ +.++++|+.++++++++||+|++..
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecC
Confidence 457889999999999999999999643499999999863 5588999999999999999999998
Q ss_pred chhhhCHHHHHHHHHHhcccCcEEEEEEecC------------------CcccHHHHHHHhcccccc
Q 028410 157 LAEALFPSRFVGEMERTVKIGGVCMVLMEEC------------------AGREIKQIVELFRTSSFT 205 (209)
Q Consensus 157 ~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~------------------~~~~~~~~~~l~~~~~~~ 205 (209)
+.++.++..+++++.++|||||++++..... .......+.+++...||.
T Consensus 123 ~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 189 (257)
T 3f4k_A 123 AIYNIGFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYT 189 (257)
T ss_dssp CSCCCCHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEE
T ss_pred hHhhcCHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCe
Confidence 8888899999999999999999999887431 122456677788888874
No 11
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.71 E-value=1.4e-17 Score=129.21 Aligned_cols=108 Identities=14% Similarity=0.145 Sum_probs=95.0
Q ss_pred CCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------CcEEEcCCCCCCCCCCceeeEEcccchhhh---CH
Q 028410 97 HSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------PLVSRADPHNLPFFDEAFDVAFTAHLAEAL---FP 163 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~---~~ 163 (209)
+.+|||+|||+|..+..+++.+. +++|+|+|+.+ +.++++|+.++++++++||+|++.++.+++ ++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 120 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGEL 120 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTH
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHH
Confidence 88999999999999999999865 99999999874 458899999999989999999999888877 78
Q ss_pred HHHHHHHHHhcccCcEEEEEEecCCc-------------ccHHHHHHHhcccccc
Q 028410 164 SRFVGEMERTVKIGGVCMVLMEECAG-------------REIKQIVELFRTSSFT 205 (209)
Q Consensus 164 ~~~l~~~~r~LkpgG~lil~~~~~~~-------------~~~~~~~~l~~~~~~~ 205 (209)
..+++++.++|||||.+++.+..... ....++.+++.++||.
T Consensus 121 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 175 (203)
T 3h2b_A 121 PDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQ 175 (203)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCc
Confidence 99999999999999999998765432 4678899999999884
No 12
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.71 E-value=1.4e-16 Score=126.94 Aligned_cols=92 Identities=25% Similarity=0.374 Sum_probs=82.8
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC---------------CcEEEcCCCCCCCCCCceeeEEcccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAFTAHL 157 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~i~~~~~ 157 (209)
.++++.+|||+|||+|..+..+++.+. +++|+|+++.+ +.+.++|+.++++++++||+|++.++
T Consensus 18 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 96 (239)
T 1xxl_A 18 ECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYA 96 (239)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCc
Confidence 568899999999999999999998754 99999999863 45789999999999999999999988
Q ss_pred hhhh-CHHHHHHHHHHhcccCcEEEEEEe
Q 028410 158 AEAL-FPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 158 ~~~~-~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
.++. ++..++.++.++|||||.+++...
T Consensus 97 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 97 AHHFSDVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 8888 999999999999999999988754
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.71 E-value=9.9e-17 Score=128.85 Aligned_cols=120 Identities=18% Similarity=0.264 Sum_probs=98.3
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCC-------------CCcEEEcCCCCCCCCCCcee
Q 028410 85 FKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-------------LPLVSRADPHNLPFFDEAFD 150 (209)
Q Consensus 85 ~~~l~~~~~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~-------------~~~~~~~d~~~~~~~~~~fD 150 (209)
...+.....+.++.+|||+|||+|..+..+++. + .+|+|+|+|+. .+.++++|+.++++++++||
T Consensus 44 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD 122 (266)
T 3ujc_A 44 TKKILSDIELNENSKVLDIGSGLGGGCMYINEKYG-AHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFD 122 (266)
T ss_dssp HHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEE
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEE
Confidence 344444445688999999999999999999985 5 49999999985 34578999999999999999
Q ss_pred eEEcccchhhh---CHHHHHHHHHHhcccCcEEEEEEecCC-------------------cccHHHHHHHhcccccc
Q 028410 151 VAFTAHLAEAL---FPSRFVGEMERTVKIGGVCMVLMEECA-------------------GREIKQIVELFRTSSFT 205 (209)
Q Consensus 151 ~i~~~~~~~~~---~~~~~l~~~~r~LkpgG~lil~~~~~~-------------------~~~~~~~~~l~~~~~~~ 205 (209)
+|++.++.+|+ ++..+++++.++|||||.+++...... ......+.+++..+||.
T Consensus 123 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 199 (266)
T 3ujc_A 123 LIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFK 199 (266)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCE
T ss_pred EEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCe
Confidence 99999888876 678999999999999999998874322 23566777888888873
No 14
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.71 E-value=4.3e-17 Score=127.12 Aligned_cols=110 Identities=15% Similarity=0.154 Sum_probs=88.2
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC---------------------------CcEEEcCCCCCCCC
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL---------------------------PLVSRADPHNLPFF 145 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~---------------------------~~~~~~d~~~~~~~ 145 (209)
.+.++.+|||+|||+|..+..+++.|. +|+|+|+|+.| +.++++|+.+++++
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 456889999999999999999999876 99999999753 34788999999876
Q ss_pred C-CceeeEEcccchhhhC---HHHHHHHHHHhcccCcEEEEEEecCC---------cccHHHHHHHhccccc
Q 028410 146 D-EAFDVAFTAHLAEALF---PSRFVGEMERTVKIGGVCMVLMEECA---------GREIKQIVELFRTSSF 204 (209)
Q Consensus 146 ~-~~fD~i~~~~~~~~~~---~~~~l~~~~r~LkpgG~lil~~~~~~---------~~~~~~~~~l~~~~~~ 204 (209)
+ ++||+|++..+.+++. ...+++++.|+|||||++++++...+ .....++.++|.. +|
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf 168 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NW 168 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SE
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-Cc
Confidence 5 8999999987777663 35689999999999998555543321 1356788888887 66
No 15
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.71 E-value=3e-17 Score=130.34 Aligned_cols=90 Identities=14% Similarity=0.162 Sum_probs=80.4
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC-----------CcEEEcCCCCCCCCCCceeeEEcccchhhh-C
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-----------PLVSRADPHNLPFFDEAFDVAFTAHLAEAL-F 162 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~-----------~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~ 162 (209)
.++.+|||+|||+|..+..+++.+. +|+|+|+|+.+ +.++++|+.++ +++++||+|++.++.+|+ +
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCSS
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhcC
Confidence 4678999999999999999999765 99999999873 46888998887 468899999999999999 9
Q ss_pred HHHHHHHHH-HhcccCcEEEEEEec
Q 028410 163 PSRFVGEME-RTVKIGGVCMVLMEE 186 (209)
Q Consensus 163 ~~~~l~~~~-r~LkpgG~lil~~~~ 186 (209)
+..+++++. ++|||||++++.+..
T Consensus 119 ~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 119 PVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 999999999 999999999998754
No 16
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.71 E-value=7.5e-17 Score=129.20 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=93.3
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
.+.++.+|||+|||+|..+..+++. + .+++|+|+|+.+ +.+.++|+.++++ +++||+|++.
T Consensus 33 ~~~~~~~VLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~ 110 (256)
T 1nkv_A 33 RMKPGTRILDLGSGSGEMLCTWARDHG-ITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACV 110 (256)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHHTC-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEEC
Confidence 5688999999999999999999984 4 499999999853 5588999999887 8899999999
Q ss_pred cchhhh-CHHHHHHHHHHhcccCcEEEEEEecC-------------------CcccHHHHHHHhcccccc
Q 028410 156 HLAEAL-FPSRFVGEMERTVKIGGVCMVLMEEC-------------------AGREIKQIVELFRTSSFT 205 (209)
Q Consensus 156 ~~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~-------------------~~~~~~~~~~l~~~~~~~ 205 (209)
.+.++. ++..+++++.++|||||.+++..... .......+.+++..+||.
T Consensus 111 ~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 180 (256)
T 1nkv_A 111 GATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYD 180 (256)
T ss_dssp SCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBC
T ss_pred CChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCe
Confidence 888888 89999999999999999998875431 122446778888888884
No 17
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.70 E-value=6.9e-17 Score=126.37 Aligned_cols=107 Identities=20% Similarity=0.184 Sum_probs=95.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCcEEEcCCCCCCCCCCceeeEEcccchhhhCHHHHHHHHHHhc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEMERTV 174 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~~l~~~~r~L 174 (209)
.++.+|||+|||+|..+..++ .+++|+|+++..+.+.++|+.++++++++||+|++..+.++.++..+++++.++|
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L 141 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVL 141 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCSSTTEEESCTTSCSCCTTCEEEEEEESCCCSSCHHHHHHHHHHHE
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCCCceEEEeccccCCCCCCCEeEEEEehhccccCHHHHHHHHHHhC
Confidence 678899999999999988773 4999999999999999999999999999999999988776558999999999999
Q ss_pred ccCcEEEEEEecCCcccHHHHHHHhcccccc
Q 028410 175 KIGGVCMVLMEECAGREIKQIVELFRTSSFT 205 (209)
Q Consensus 175 kpgG~lil~~~~~~~~~~~~~~~l~~~~~~~ 205 (209)
||||.+++............+.+++..+||.
T Consensus 142 ~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~ 172 (215)
T 2zfu_A 142 KPGGLLKVAEVSSRFEDVRTFLRAVTKLGFK 172 (215)
T ss_dssp EEEEEEEEEECGGGCSCHHHHHHHHHHTTEE
T ss_pred CCCeEEEEEEcCCCCCCHHHHHHHHHHCCCE
Confidence 9999999887665555788899999999884
No 18
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.70 E-value=1e-16 Score=131.38 Aligned_cols=112 Identities=16% Similarity=0.135 Sum_probs=94.0
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
.+.++.+|||+|||+|..+..+++. +. +++|+|+|+.+ +.+..+|+.++|+++++||+|++.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 157 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQ 157 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEec
Confidence 5578899999999999999999985 65 99999999864 458899999999999999999999
Q ss_pred cchhhh-CHHHHHHHHHHhcccCcEEEEEEecCC-------------------cccHHHHHHHhcccccc
Q 028410 156 HLAEAL-FPSRFVGEMERTVKIGGVCMVLMEECA-------------------GREIKQIVELFRTSSFT 205 (209)
Q Consensus 156 ~~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~~-------------------~~~~~~~~~l~~~~~~~ 205 (209)
.+.+|+ ++..+++++.++|||||++++...... ......+.+++..+||.
T Consensus 158 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 227 (297)
T 2o57_A 158 DAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLV 227 (297)
T ss_dssp SCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEE
T ss_pred chhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCe
Confidence 988888 899999999999999999998864321 11345566677777773
No 19
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.70 E-value=3e-17 Score=132.54 Aligned_cols=92 Identities=21% Similarity=0.184 Sum_probs=82.1
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC---------cEEEcCCCCCCCCCCceeeEEcccchhhh-C
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP---------LVSRADPHNLPFFDEAFDVAFTAHLAEAL-F 162 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~---------~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~ 162 (209)
...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.++ .++++|+.++++++++||+|++.++.+++ +
T Consensus 31 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 109 (261)
T 3ege_A 31 NLPKGSVIADIGAGTGGYSVALANQG-LFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHHFSH 109 (261)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHTTT-CEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGGCSS
T ss_pred CCCCCCEEEEEcCcccHHHHHHHhCC-CEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhhccC
Confidence 45788999999999999999999865 5999999998643 48899999999999999999999998888 9
Q ss_pred HHHHHHHHHHhcccCcEEEEEEec
Q 028410 163 PSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 163 ~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+..+++++.++|| ||++++....
T Consensus 110 ~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 110 LEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp HHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred HHHHHHHHHHHhC-CcEEEEEEcC
Confidence 9999999999999 9987777654
No 20
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.70 E-value=1.1e-16 Score=129.40 Aligned_cols=102 Identities=23% Similarity=0.290 Sum_probs=86.7
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCc
Q 028410 85 FKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEA 148 (209)
Q Consensus 85 ~~~l~~~~~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~ 148 (209)
...+.....+.++.+|||+|||+|..+..+++....+|+|+|+|+.+ +.+..+|+.++++++++
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 129 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDAS 129 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCC
Confidence 33444444567899999999999999999998423599999999763 45889999999999999
Q ss_pred eeeEEcccchhhh-CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 149 FDVAFTAHLAEAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 149 fD~i~~~~~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
||+|++..+.+|+ ++..+++++.++|||||++++....
T Consensus 130 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 130 FDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp EEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred ccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 9999999999988 8999999999999999999888643
No 21
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.70 E-value=3e-17 Score=133.58 Aligned_cols=93 Identities=18% Similarity=0.247 Sum_probs=82.6
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCC----------CCcEEEcCCCCCCCCCCceeeEEcccchhhh-
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL- 161 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~----------~~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~- 161 (209)
...++.+|||+|||+|..+..+++.+ .+|+|+|+|+. .+.+.++|+.++++ +++||+|++..+.+++
T Consensus 54 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 54 NPQPGEFILDLGCGTGQLTEKIAQSG-AEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNAMLHWVK 131 (279)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEESCGGGCS
T ss_pred CCCCCCEEEEecCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcchhhhCc
Confidence 34678999999999999999999854 59999999987 35689999999987 6899999999999888
Q ss_pred CHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 162 FPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 162 ~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
++..+++++.++|||||++++.+...
T Consensus 132 d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 132 EPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 99999999999999999999887654
No 22
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.70 E-value=1.7e-16 Score=129.37 Aligned_cols=90 Identities=14% Similarity=0.238 Sum_probs=80.6
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCC-CCCCceeeEEcccc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLP-FFDEAFDVAFTAHL 157 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~-~~~~~fD~i~~~~~ 157 (209)
.++.+|||+|||+|..+..+++.+. +|+|+|+|+.+ +.++++|+.+++ +++++||+|++..+
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 3468999999999999999999865 99999999853 348899999987 78899999999999
Q ss_pred hhhh-CHHHHHHHHHHhcccCcEEEEEEe
Q 028410 158 AEAL-FPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 158 ~~~~-~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
.+++ ++..+++++.++|||||.+++.+.
T Consensus 146 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 146 LEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp GGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9988 999999999999999999998875
No 23
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.69 E-value=1.3e-16 Score=124.98 Aligned_cols=90 Identities=14% Similarity=0.119 Sum_probs=79.8
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCC-----------CCcEEEcCCCCCCCCCCceeeEEcccchhhh-C
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-----------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL-F 162 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~-----------~~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~ 162 (209)
.++.+|||+|||+|..+..+++.+. +++|+|+++. .+.+..+|+.+++++ ++||+|++.++.+++ +
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~ 121 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLTD 121 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESCGGGSCH
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcchhcCCh
Confidence 5789999999999999999999864 9999999986 456899999999887 999999999999988 5
Q ss_pred HHH--HHHHHHHhcccCcEEEEEEec
Q 028410 163 PSR--FVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 163 ~~~--~l~~~~r~LkpgG~lil~~~~ 186 (209)
+.. +++++.++|||||.+++....
T Consensus 122 ~~~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 122 DEKNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 555 999999999999999988643
No 24
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.69 E-value=1.8e-16 Score=125.00 Aligned_cols=91 Identities=23% Similarity=0.391 Sum_probs=81.5
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC--------------------CcEEEcCCCCCCCCCCceeeEE
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL--------------------PLVSRADPHNLPFFDEAFDVAF 153 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~--------------------~~~~~~d~~~~~~~~~~fD~i~ 153 (209)
++++.+|||+|||+|..+..+++.+. +++|+|+++.+ +.+..+|+.++++++++||+|+
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 37889999999999999999999865 99999999863 3578999999999999999999
Q ss_pred cccchhhh-CHH---HHHHHHHHhcccCcEEEEEEe
Q 028410 154 TAHLAEAL-FPS---RFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 154 ~~~~~~~~-~~~---~~l~~~~r~LkpgG~lil~~~ 185 (209)
+..+.+++ ++. .+++++.++|||||.+++...
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 99988888 777 899999999999999988854
No 25
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.69 E-value=3e-16 Score=124.18 Aligned_cols=92 Identities=17% Similarity=0.116 Sum_probs=79.2
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC-------------CcEEEcCCCCCCCCCCceeeEEcccchh
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL-------------PLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~-------------~~~~~~d~~~~~~~~~~fD~i~~~~~~~ 159 (209)
..++.+|||+|||+|..+..+++. +..+++|+|+|+.+ +.++++|+.+++++ ++||+|++..+.+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSALSIH 120 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEESCGG
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeCccc
Confidence 467899999999999999999985 34699999999863 45889999999887 8999999999988
Q ss_pred hhC-HH--HHHHHHHHhcccCcEEEEEEec
Q 028410 160 ALF-PS--RFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 160 ~~~-~~--~~l~~~~r~LkpgG~lil~~~~ 186 (209)
++. +. .+++++.++|||||.+++....
T Consensus 121 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 121 HLEDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 884 33 5999999999999999988643
No 26
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.68 E-value=3.9e-17 Score=130.03 Aligned_cols=112 Identities=14% Similarity=0.195 Sum_probs=93.1
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC-------CcEEEcCCCCC--CCCCCceeeEEcccchhhh-C
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-------PLVSRADPHNL--PFFDEAFDVAFTAHLAEAL-F 162 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~-------~~~~~~d~~~~--~~~~~~fD~i~~~~~~~~~-~ 162 (209)
.++++.+|||+|||+|.++..+++.+. +|+|+|+|+.+ +.++.+|+.+. ++++++||+|++.++.+|+ +
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~ 116 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGKFNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP 116 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTTSEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhhcceeeccHHHHhhhcCCCCeeEEEECCchhhCCc
Confidence 347889999999999999999998865 89999999875 45778888775 7889999999999998888 4
Q ss_pred H--HHHHHHHHHhcccCcEEEEEEecCCc----------------ccHHHHHHHhcccccc
Q 028410 163 P--SRFVGEMERTVKIGGVCMVLMEECAG----------------REIKQIVELFRTSSFT 205 (209)
Q Consensus 163 ~--~~~l~~~~r~LkpgG~lil~~~~~~~----------------~~~~~~~~l~~~~~~~ 205 (209)
+ ..+++++.++|||||++++.+..... .....+.+++.++||.
T Consensus 117 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 177 (240)
T 3dli_A 117 ERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFR 177 (240)
T ss_dssp GGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCe
Confidence 4 89999999999999999988765432 2446677788877774
No 27
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.68 E-value=4.4e-16 Score=121.46 Aligned_cols=110 Identities=17% Similarity=0.144 Sum_probs=92.4
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCC-----------CCcEEEcCCCCCCCCCCceeeEEcccchhhh-
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-----------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL- 161 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~-----------~~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~- 161 (209)
..++.+|||+|||+|..+..+++.+. +++|+|+++. .+.++++|+.++ +++++||+|++..+.+++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEechhhcCC
Confidence 57788999999999999999999865 9999999985 345889999988 788999999999999888
Q ss_pred CH--HHHHHHHHHhcccCcEEEEEEecCC-------------------------------cccHHHHHHHhcccccc
Q 028410 162 FP--SRFVGEMERTVKIGGVCMVLMEECA-------------------------------GREIKQIVELFRTSSFT 205 (209)
Q Consensus 162 ~~--~~~l~~~~r~LkpgG~lil~~~~~~-------------------------------~~~~~~~~~l~~~~~~~ 205 (209)
++ ..+++++.++|||||.+++...... .....++.+++..+||.
T Consensus 122 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 198 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWS 198 (218)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCE
Confidence 43 8999999999999999998865321 12556788888888884
No 28
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.68 E-value=9.9e-17 Score=128.24 Aligned_cols=119 Identities=14% Similarity=0.069 Sum_probs=96.4
Q ss_pred HHHhcccCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC-------------CcEEEcCCCCCCCCCCceeeEE
Q 028410 87 HLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-------------PLVSRADPHNLPFFDEAFDVAF 153 (209)
Q Consensus 87 ~l~~~~~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~-------------~~~~~~d~~~~~~~~~~fD~i~ 153 (209)
.+.......++.+|||+|||+|..+..+++.+..+|+++|+|+.+ +.++++|+.++++++++||+|+
T Consensus 84 ~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 163 (254)
T 1xtp_A 84 NFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIV 163 (254)
T ss_dssp HHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEE
T ss_pred HHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEE
Confidence 333333456789999999999999999988655689999999874 3478899999998889999999
Q ss_pred cccchhhh---CHHHHHHHHHHhcccCcEEEEEEecCC-------------cccHHHHHHHhcccccc
Q 028410 154 TAHLAEAL---FPSRFVGEMERTVKIGGVCMVLMEECA-------------GREIKQIVELFRTSSFT 205 (209)
Q Consensus 154 ~~~~~~~~---~~~~~l~~~~r~LkpgG~lil~~~~~~-------------~~~~~~~~~l~~~~~~~ 205 (209)
+.++.+++ ++..+++++.++|||||.+++...... ......+.+++.++||.
T Consensus 164 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 231 (254)
T 1xtp_A 164 IQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVR 231 (254)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCC
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCE
Confidence 99888887 368999999999999999999875321 12457788899888884
No 29
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.68 E-value=2e-16 Score=128.32 Aligned_cols=96 Identities=23% Similarity=0.352 Sum_probs=84.3
Q ss_pred hcccCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC---------------CcEEEcCCCCCCCCCCceeeEE
Q 028410 90 GKSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAF 153 (209)
Q Consensus 90 ~~~~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~i~ 153 (209)
....+.++.+|||+|||+|..+..+++. +..+++|+|+++.+ +.+..+|+.++++++++||+|+
T Consensus 31 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 110 (276)
T 3mgg_A 31 HDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIF 110 (276)
T ss_dssp TTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEE
T ss_pred hcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEE
Confidence 3345678999999999999999999985 34699999999753 4588999999999999999999
Q ss_pred cccchhhh-CHHHHHHHHHHhcccCcEEEEEEe
Q 028410 154 TAHLAEAL-FPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 154 ~~~~~~~~-~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
++.+.+++ ++..+++++.++|||||.+++...
T Consensus 111 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 111 VCFVLEHLQSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EechhhhcCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 99999888 899999999999999999988764
No 30
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.68 E-value=7.7e-17 Score=125.74 Aligned_cols=110 Identities=18% Similarity=0.180 Sum_probs=94.5
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC---------cEEEcCCCCCCCCCCceeeEEcccchhhh---
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP---------LVSRADPHNLPFFDEAFDVAFTAHLAEAL--- 161 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~---------~~~~~d~~~~~~~~~~fD~i~~~~~~~~~--- 161 (209)
+.++.+|||+|||+|..+..+++.+. +++|+|+|+.++ .+..+|+.+++ ++++||+|++..+.+++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRLGRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhcCCceEEeeeccCC-CCCcEEEEEecCchhhcCHH
Confidence 46789999999999999999999865 999999998744 57889999888 78999999999888887
Q ss_pred CHHHHHHHHHHhcccCcEEEEEEecCC------------cccHHHHHHHhcccc-cc
Q 028410 162 FPSRFVGEMERTVKIGGVCMVLMEECA------------GREIKQIVELFRTSS-FT 205 (209)
Q Consensus 162 ~~~~~l~~~~r~LkpgG~lil~~~~~~------------~~~~~~~~~l~~~~~-~~ 205 (209)
++..+++++.++|||||++++.+.... ......+.+++..+| |.
T Consensus 119 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~ 175 (211)
T 3e23_A 119 ELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWA 175 (211)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCS
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcE
Confidence 457899999999999999999876543 247788999999888 73
No 31
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.67 E-value=4.2e-16 Score=125.08 Aligned_cols=93 Identities=18% Similarity=0.218 Sum_probs=83.0
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC--------------CcEEEcCCCCCCCCCCceeeEEcccch
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL--------------PLVSRADPHNLPFFDEAFDVAFTAHLA 158 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~--------------~~~~~~d~~~~~~~~~~fD~i~~~~~~ 158 (209)
.+.++.+|||+|||+|..+..+++.+ .+++|+|+|+.+ +.+.++|+.++++++++||+|++..+.
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARG-YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTT-CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCch
Confidence 45788999999999999999999885 499999999753 457899999999989999999999998
Q ss_pred hhh-CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 159 EAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 159 ~~~-~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+++ ++..+++++.++|||||.+++....
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (263)
T 2yqz_A 115 HLVPDWPKVLAEAIRVLKPGGALLEGWDQ 143 (263)
T ss_dssp GGCTTHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHCCCCcEEEEEecC
Confidence 888 8999999999999999999888544
No 32
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.67 E-value=2.5e-16 Score=127.58 Aligned_cols=93 Identities=10% Similarity=0.152 Sum_probs=77.6
Q ss_pred ccCCCCCeEEEEcCCCChhHHHHHhc---CCceEEEecCCCCCC----------------cEEEcCCCCCCCCCCceeeE
Q 028410 92 SLLFNHSKVLCVSAGAGHEVMAFNSI---GVADVTGVELMDSLP----------------LVSRADPHNLPFFDEAFDVA 152 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~G~~~~~la~~---~~~~v~~vD~s~~~~----------------~~~~~d~~~~~~~~~~fD~i 152 (209)
..++++.+|||+|||+|..+..+++. +..+|+|+|+|+.|+ +++++|+.++|+ ++||+|
T Consensus 66 ~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~--~~~d~v 143 (261)
T 4gek_A 66 RFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI--ENASMV 143 (261)
T ss_dssp HHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC--CSEEEE
T ss_pred HhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc--cccccc
Confidence 34689999999999999999999873 224899999998754 378999999886 459999
Q ss_pred EcccchhhhCH---HHHHHHHHHhcccCcEEEEEEec
Q 028410 153 FTAHLAEALFP---SRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 153 ~~~~~~~~~~~---~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+++.+.+++.+ ..++++++++|||||.+++....
T Consensus 144 ~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 144 VLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred eeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 99988888733 56899999999999999887543
No 33
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.67 E-value=1.6e-16 Score=126.07 Aligned_cols=92 Identities=18% Similarity=0.268 Sum_probs=82.0
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC------------CcEEEcCCCCCCCCCCceeeEEcccchhhh
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL------------PLVSRADPHNLPFFDEAFDVAFTAHLAEAL 161 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~------------~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~ 161 (209)
..++.+|||+|||+|..+..+++.+..+++|+|+|+.+ +.+.++|+.++++++++||+|++..+.++.
T Consensus 41 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 120 (243)
T 3bkw_A 41 EVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYV 120 (243)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred ccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEecccccc
Confidence 35788999999999999999998865699999999763 457889999988888999999999988888
Q ss_pred -CHHHHHHHHHHhcccCcEEEEEEe
Q 028410 162 -FPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 162 -~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
++..+++++.++|||||.+++.+.
T Consensus 121 ~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 121 EDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chHHHHHHHHHHhcCcCcEEEEEeC
Confidence 899999999999999999998763
No 34
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.66 E-value=6.1e-16 Score=120.53 Aligned_cols=90 Identities=28% Similarity=0.283 Sum_probs=80.2
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------CcEEEcCCCCCCCCCCceeeEEcccchhhh-CH
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------PLVSRADPHNLPFFDEAFDVAFTAHLAEAL-FP 163 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~~ 163 (209)
.++.+|||+|||+|..+..+ +..+++|+|+|+.+ +.++++|+.++++++++||+|++.++.+++ ++
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 111 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDV 111 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCH
T ss_pred CCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCH
Confidence 48899999999999999887 44499999999864 458899999999999999999999998888 89
Q ss_pred HHHHHHHHHhcccCcEEEEEEecC
Q 028410 164 SRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 164 ~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
.++++++.++|||||.+++.+...
T Consensus 112 ~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 112 ERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECT
T ss_pred HHHHHHHHHHcCCCCEEEEEecCC
Confidence 999999999999999999987654
No 35
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.66 E-value=1.6e-16 Score=128.63 Aligned_cols=112 Identities=14% Similarity=0.092 Sum_probs=88.3
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc----------------------------------------
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL---------------------------------------- 133 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~---------------------------------------- 133 (209)
..++.+|||+|||+|.++..++..+..+|+|+|+|+.|++
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 4678899999999998888777776668999999975443
Q ss_pred -----EEEcCCCC-CCC---CCCceeeEEcccchhhh-----CHHHHHHHHHHhcccCcEEEEEEecCC-----------
Q 028410 134 -----VSRADPHN-LPF---FDEAFDVAFTAHLAEAL-----FPSRFVGEMERTVKIGGVCMVLMEECA----------- 188 (209)
Q Consensus 134 -----~~~~d~~~-~~~---~~~~fD~i~~~~~~~~~-----~~~~~l~~~~r~LkpgG~lil~~~~~~----------- 188 (209)
++++|+.+ .|+ ..++||+|+++.+.+++ +...+++++.++|||||.+++......
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~ 212 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFS 212 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEee
Confidence 67888887 343 36799999999887764 346899999999999999999863321
Q ss_pred --cccHHHHHHHhcccccc
Q 028410 189 --GREIKQIVELFRTSSFT 205 (209)
Q Consensus 189 --~~~~~~~~~l~~~~~~~ 205 (209)
.....++.+++..+||.
T Consensus 213 ~~~~~~~~l~~~l~~aGF~ 231 (263)
T 2a14_A 213 CVALEKGEVEQAVLDAGFD 231 (263)
T ss_dssp CCCCCHHHHHHHHHHTTEE
T ss_pred ccccCHHHHHHHHHHCCCE
Confidence 13667888999998883
No 36
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.66 E-value=4e-16 Score=119.33 Aligned_cols=111 Identities=17% Similarity=0.169 Sum_probs=96.2
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------CcEEEcCCCCCCCCCCceeeEEcc-cchhhh-
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------PLVSRADPHNLPFFDEAFDVAFTA-HLAEAL- 161 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------~~~~~~d~~~~~~~~~~fD~i~~~-~~~~~~- 161 (209)
+.++.+|||+|||+|..+..+++.+. +++++|+++.+ +.+..+|+.++++++++||+|+++ .+.++.
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~ 122 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLA 122 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSC
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcC
Confidence 47889999999999999999999864 99999999863 568899999988888999999997 666665
Q ss_pred --CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccccc
Q 028410 162 --FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSFT 205 (209)
Q Consensus 162 --~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~~ 205 (209)
+...++.++.++|||||.+++............+.+++...||.
T Consensus 123 ~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~ 168 (195)
T 3cgg_A 123 EDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLE 168 (195)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEE
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCE
Confidence 34889999999999999999988877777888999999888873
No 37
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.66 E-value=1.9e-16 Score=126.19 Aligned_cols=111 Identities=12% Similarity=0.164 Sum_probs=92.6
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC---------------CcEEEcCCCCCCCCCCceeeEEcccchh
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~i~~~~~~~ 159 (209)
.++.+|||+|||+|..+..+++.+..+++++|+|+.+ +.++.+|+.++++++++||+|++.++.+
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 3689999999999999999988655699999999874 3478899988888888999999999888
Q ss_pred hh-CH--HHHHHHHHHhcccCcEEEEEEecCC------------cccHHHHHHHhcccccc
Q 028410 160 AL-FP--SRFVGEMERTVKIGGVCMVLMEECA------------GREIKQIVELFRTSSFT 205 (209)
Q Consensus 160 ~~-~~--~~~l~~~~r~LkpgG~lil~~~~~~------------~~~~~~~~~l~~~~~~~ 205 (209)
++ ++ ..+++++.++|||||.+++...... ......+.+++.++||.
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 218 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLS 218 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCC
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCe
Confidence 88 43 4899999999999999998764321 12578889999998883
No 38
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.65 E-value=4.6e-16 Score=122.09 Aligned_cols=110 Identities=19% Similarity=0.323 Sum_probs=93.3
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC--------cEEEcCCCC--CCCCCCceeeEEcccchhhh-CH
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP--------LVSRADPHN--LPFFDEAFDVAFTAHLAEAL-FP 163 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~--------~~~~~d~~~--~~~~~~~fD~i~~~~~~~~~-~~ 163 (209)
.++.+|||+|||+|..+..+++.| .+++++|+++.++ .+..+|+.+ .++++++||+|++.++.+++ ++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~ 109 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDP 109 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCH
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhcCCH
Confidence 678999999999999999999886 5999999998743 478899887 67778999999999998888 89
Q ss_pred HHHHHHHHHhcccCcEEEEEEecC---------------------------CcccHHHHHHHhcccccc
Q 028410 164 SRFVGEMERTVKIGGVCMVLMEEC---------------------------AGREIKQIVELFRTSSFT 205 (209)
Q Consensus 164 ~~~l~~~~r~LkpgG~lil~~~~~---------------------------~~~~~~~~~~l~~~~~~~ 205 (209)
..++.++.++|||||.+++.+... ......++.+++.++||.
T Consensus 110 ~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 178 (230)
T 3cc8_A 110 WAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYS 178 (230)
T ss_dssp HHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCe
Confidence 999999999999999999987542 113567778888888873
No 39
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.65 E-value=1e-15 Score=123.38 Aligned_cols=91 Identities=20% Similarity=0.287 Sum_probs=79.5
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC---------cEEEcCCCCCCCCCCceeeEEcccchhhh--CH
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP---------LVSRADPHNLPFFDEAFDVAFTAHLAEAL--FP 163 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~---------~~~~~d~~~~~~~~~~fD~i~~~~~~~~~--~~ 163 (209)
.++.+|||+|||+|..+..+++.+. +++|+|+|+.++ .+.++|+.++++++++||+|++..+..+. ++
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~ 131 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVENK 131 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSCH
T ss_pred CCCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhccccH
Confidence 4788999999999999999999865 999999998754 27899999999989999999997644443 78
Q ss_pred HHHHHHHHHhcccCcEEEEEEec
Q 028410 164 SRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 164 ~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
..+++++.++|||||.+++.+..
T Consensus 132 ~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 132 DKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEB
T ss_pred HHHHHHHHHHcCCCeEEEEEeCC
Confidence 99999999999999999888765
No 40
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.64 E-value=9.4e-16 Score=130.55 Aligned_cols=112 Identities=17% Similarity=0.228 Sum_probs=94.4
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCC-----------------------CCcEEEcCCCCC------
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS-----------------------LPLVSRADPHNL------ 142 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~-----------------------~~~~~~~d~~~~------ 142 (209)
..++.+|||+|||+|..+..+++. +..+|+|+|+|+. .+.++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 467899999999999999999884 4569999999874 345789999987
Q ss_pred CCCCCceeeEEcccchhhh-CHHHHHHHHHHhcccCcEEEEEEecCC--------------------cccHHHHHHHhcc
Q 028410 143 PFFDEAFDVAFTAHLAEAL-FPSRFVGEMERTVKIGGVCMVLMEECA--------------------GREIKQIVELFRT 201 (209)
Q Consensus 143 ~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~~--------------------~~~~~~~~~l~~~ 201 (209)
++++++||+|+++.+.++. ++..+++++.++|||||++++.....+ ......+.+++.+
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 240 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAE 240 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHH
Confidence 8999999999999998888 999999999999999999988753321 1345778889998
Q ss_pred cccc
Q 028410 202 SSFT 205 (209)
Q Consensus 202 ~~~~ 205 (209)
+||.
T Consensus 241 aGF~ 244 (383)
T 4fsd_A 241 AGFR 244 (383)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 8884
No 41
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.64 E-value=7.8e-16 Score=125.66 Aligned_cols=94 Identities=15% Similarity=0.254 Sum_probs=80.9
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCCC-CCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPF-FDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~-~~~~fD~i~~~ 155 (209)
.+.++.+|||+|||+|..+..+++.+..+++|+|+|+.+ +.++++|+.+.++ ++++||+|++.
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 61 YTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp HCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred hCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC
Confidence 457889999999999999999988776699999999863 3578999999888 68899999998
Q ss_pred cchhh----h-CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 156 HLAEA----L-FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 156 ~~~~~----~-~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
.+.++ . ++..+++++.++|||||.+++.+..
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 77655 3 6789999999999999999988754
No 42
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.64 E-value=2.4e-16 Score=125.02 Aligned_cols=108 Identities=21% Similarity=0.284 Sum_probs=89.7
Q ss_pred CCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEcccchh
Q 028410 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~~~~~~ 159 (209)
++.+|||+|||+|..+..+++.+ .+|+|+|+|+.+ +.+.++|+.+++ ++++||+|++..+.+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPE-RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFC 143 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTT-EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTT
T ss_pred CCCCEEEeCCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhh
Confidence 34599999999999999998865 489999999863 348899999877 466999999988877
Q ss_pred hh---CHHHHHHHHHHhcccCcEEEEEEecCC--------cccHHHHHHHhcccccc
Q 028410 160 AL---FPSRFVGEMERTVKIGGVCMVLMEECA--------GREIKQIVELFRTSSFT 205 (209)
Q Consensus 160 ~~---~~~~~l~~~~r~LkpgG~lil~~~~~~--------~~~~~~~~~l~~~~~~~ 205 (209)
++ ++..+++++.++|||||.+++...... .....++.++|..+||.
T Consensus 144 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 200 (235)
T 3lcc_A 144 AIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFK 200 (235)
T ss_dssp TSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEE
T ss_pred cCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCe
Confidence 77 568999999999999999988765432 23578899999999884
No 43
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.64 E-value=5.9e-16 Score=121.01 Aligned_cols=91 Identities=16% Similarity=0.072 Sum_probs=79.4
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC-------------CcEEEcCCCCCCCCCCceeeEEcccchh
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-------------PLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~-------------~~~~~~d~~~~~~~~~~fD~i~~~~~~~ 159 (209)
...++.+|||+|||+|..+..+++.+ .+++|+|+++.+ +.++++|+.+++ ++++||+|+++++.+
T Consensus 48 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~ 125 (216)
T 3ofk_A 48 SSGAVSNGLEIGCAAGAFTEKLAPHC-KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLY 125 (216)
T ss_dssp TTSSEEEEEEECCTTSHHHHHHGGGE-EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGG
T ss_pred ccCCCCcEEEEcCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHH
Confidence 44677899999999999999999976 499999999863 358899999988 689999999999999
Q ss_pred hh-CH---HHHHHHHHHhcccCcEEEEEEe
Q 028410 160 AL-FP---SRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 160 ~~-~~---~~~l~~~~r~LkpgG~lil~~~ 185 (209)
|+ ++ ..+++++.++|||||.+++.+.
T Consensus 126 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 126 YLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp GSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 88 66 5779999999999999988764
No 44
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.64 E-value=8.7e-17 Score=138.08 Aligned_cols=120 Identities=10% Similarity=0.110 Sum_probs=94.3
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCcE--------E-----EcCCCCCCCCCCceee
Q 028410 85 FKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPLV--------S-----RADPHNLPFFDEAFDV 151 (209)
Q Consensus 85 ~~~l~~~~~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~~--------~-----~~d~~~~~~~~~~fD~ 151 (209)
...+.....+.++.+|||+|||+|.++..+++.+. +++|+|+|+.+++. . ..+..++++++++||+
T Consensus 96 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~ 174 (416)
T 4e2x_A 96 ARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANV 174 (416)
T ss_dssp HHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEE
T ss_pred HHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEE
Confidence 33344444567889999999999999999999876 99999999875541 1 2223334566799999
Q ss_pred EEcccchhhh-CHHHHHHHHHHhcccCcEEEEEEec-----------------CCcccHHHHHHHhcccccc
Q 028410 152 AFTAHLAEAL-FPSRFVGEMERTVKIGGVCMVLMEE-----------------CAGREIKQIVELFRTSSFT 205 (209)
Q Consensus 152 i~~~~~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~-----------------~~~~~~~~~~~l~~~~~~~ 205 (209)
|++.++.+|+ ++..+++++.++|||||++++.+.. ....+...+.+++.++||.
T Consensus 175 I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~ 246 (416)
T 4e2x_A 175 IYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFE 246 (416)
T ss_dssp EEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEE
T ss_pred EEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCE
Confidence 9999999999 9999999999999999999987653 1234567888899888883
No 45
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.63 E-value=9.7e-16 Score=125.91 Aligned_cols=90 Identities=11% Similarity=0.160 Sum_probs=79.8
Q ss_pred CCCCeEEEEcCCCChhHHHHHh--cCCceEEEecCCCC-----------------CCcEEEcCCCCCCCCC------Cce
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS--IGVADVTGVELMDS-----------------LPLVSRADPHNLPFFD------EAF 149 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~--~~~~~v~~vD~s~~-----------------~~~~~~~d~~~~~~~~------~~f 149 (209)
.++.+|||+|||+|..+..+++ .+..+|+|+|+|+. .+.++++|+.++++++ ++|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 6889999999999999999996 24569999999875 3458899999998877 899
Q ss_pred eeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 150 D~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
|+|+++.+.+++++..+++++.++|||||.+++..
T Consensus 115 D~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 115 DMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEe
Confidence 99999988888899999999999999999998843
No 46
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.63 E-value=1e-15 Score=119.99 Aligned_cols=91 Identities=16% Similarity=0.089 Sum_probs=77.5
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCC--------------------CCcEEEcCCCCCCCCCCceeeEE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS--------------------LPLVSRADPHNLPFFDEAFDVAF 153 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~--------------------~~~~~~~d~~~~~~~~~~fD~i~ 153 (209)
.++.+|||+|||+|..+..+++. +..+++|+|+|+. .+.+.++|+...++++++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 56789999999999999999985 3369999999986 24578899988888889999999
Q ss_pred cccchhhh-CH--HHHHHHHHHhcccCcEEEEEEe
Q 028410 154 TAHLAEAL-FP--SRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 154 ~~~~~~~~-~~--~~~l~~~~r~LkpgG~lil~~~ 185 (209)
+..+.+++ ++ ..+++++.++|||||.++....
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 99999988 44 5899999999999996655543
No 47
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.63 E-value=1.3e-15 Score=122.64 Aligned_cols=87 Identities=17% Similarity=0.203 Sum_probs=76.4
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------CcEEEcCCCCCCCCCCceeeEEccc-chhhh--
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------PLVSRADPHNLPFFDEAFDVAFTAH-LAEAL-- 161 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------~~~~~~d~~~~~~~~~~fD~i~~~~-~~~~~-- 161 (209)
.++.+|||+|||+|..+..+++.+. +|+|+|+|+.+ +.++++|+.++++ +++||+|++.. +.+++
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~ 126 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAG 126 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCH
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCC
Confidence 5678999999999999999999864 99999999874 4588999999887 78999999986 88777
Q ss_pred --CHHHHHHHHHHhcccCcEEEEE
Q 028410 162 --FPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 162 --~~~~~l~~~~r~LkpgG~lil~ 183 (209)
+...+++++.++|||||.+++.
T Consensus 127 ~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 127 QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 3467899999999999999884
No 48
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.63 E-value=6.3e-16 Score=123.00 Aligned_cols=130 Identities=12% Similarity=0.144 Sum_probs=93.1
Q ss_pred HhhHhHHHHHHHHHHHhcccCCCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCCCCc-------------EEEcC
Q 028410 74 WKQQVTSYAHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSLPL-------------VSRAD 138 (209)
Q Consensus 74 ~~~~~~~~~~~~~~l~~~~~~~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~~~~-------------~~~~d 138 (209)
|....+.+...+-.-++...++++++|||+|||+|.++..+++. +.++|+|+|+++.|++ .+.+|
T Consensus 55 w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d 134 (233)
T 4df3_A 55 WNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGD 134 (233)
T ss_dssp CCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESC
T ss_pred ECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEe
Confidence 54444444333333333446799999999999999999999994 4689999999998653 56666
Q ss_pred CCC---CCCCCCceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEEecC-------CcccHHHHHHHhccccc
Q 028410 139 PHN---LPFFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEEC-------AGREIKQIVELFRTSSF 204 (209)
Q Consensus 139 ~~~---~~~~~~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~-------~~~~~~~~~~l~~~~~~ 204 (209)
..+ .++..+++|+|++. +.++-++..++.++.+.|||||+++++.... ....+....+.+...||
T Consensus 135 ~~~p~~~~~~~~~vDvVf~d-~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF 209 (233)
T 4df3_A 135 ARFPEKYRHLVEGVDGLYAD-VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGL 209 (233)
T ss_dssp TTCGGGGTTTCCCEEEEEEC-CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTC
T ss_pred ccCccccccccceEEEEEEe-ccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCC
Confidence 654 45667899999873 3333367889999999999999998876432 23344555566666666
No 49
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.63 E-value=1.6e-15 Score=123.90 Aligned_cols=93 Identities=15% Similarity=0.265 Sum_probs=81.4
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCCCC--------------cEEEcCCCCCCCCCCceeeEEccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSLP--------------LVSRADPHNLPFFDEAFDVAFTAH 156 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~~~--------------~~~~~d~~~~~~~~~~fD~i~~~~ 156 (209)
.+.++.+|||+|||+|..+..+++. + ..+|+|+|+|+.++ .+.++|+.++++ +++||+|++..
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~ 97 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIEL-NDKYDIAICHA 97 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC-SSCEEEEEEES
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCc-CCCeeEEEECC
Confidence 4578899999999999999999984 4 35999999998743 488999999988 56999999999
Q ss_pred chhhh-CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 157 LAEAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 157 ~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+.++. ++..+++++.++|||||++++....
T Consensus 98 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 98 FLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 98888 9999999999999999999877654
No 50
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.62 E-value=5.3e-16 Score=126.90 Aligned_cols=111 Identities=15% Similarity=0.159 Sum_probs=85.2
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc-----------------------------------------
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL----------------------------------------- 133 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~----------------------------------------- 133 (209)
.++.+|||+|||+|.....++..+..+|+|+|+|+.+++
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 367899999999999655444433359999999998663
Q ss_pred ----EEEcCCCC-CCC-----CCCceeeEEcccchhh----h-CHHHHHHHHHHhcccCcEEEEEEecC-----------
Q 028410 134 ----VSRADPHN-LPF-----FDEAFDVAFTAHLAEA----L-FPSRFVGEMERTVKIGGVCMVLMEEC----------- 187 (209)
Q Consensus 134 ----~~~~d~~~-~~~-----~~~~fD~i~~~~~~~~----~-~~~~~l~~~~r~LkpgG~lil~~~~~----------- 187 (209)
++++|+.+ +|+ ++++||+|+++.+.++ . ++..+++++.++|||||++++.....
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~ 229 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeee
Confidence 23338877 553 4567999999988888 5 68999999999999999998864211
Q ss_pred --CcccHHHHHHHhcccccc
Q 028410 188 --AGREIKQIVELFRTSSFT 205 (209)
Q Consensus 188 --~~~~~~~~~~l~~~~~~~ 205 (209)
.......+.++|..+||.
T Consensus 230 ~~~~~~~~~l~~~l~~aGf~ 249 (289)
T 2g72_A 230 TVVPVSEEEVREALVRSGYK 249 (289)
T ss_dssp ECCCCCHHHHHHHHHHTTEE
T ss_pred eeccCCHHHHHHHHHHcCCe
Confidence 134677888999998884
No 51
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.62 E-value=1.6e-15 Score=116.61 Aligned_cols=109 Identities=17% Similarity=0.225 Sum_probs=88.4
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC---------------CcEEEcCCCCCCCCCCceeeEEcccchh
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~i~~~~~~~ 159 (209)
.++.+|||+|||+|..+..+++.+. +++++|+|+.+ +.+..+|+.++++ +++||+|++..+.+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~ 108 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLM 108 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGG
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhh
Confidence 5678999999999999999999865 99999999863 4578899998887 88999999998887
Q ss_pred hh---CHHHHHHHHHHhcccCcEEEEEEecC-----------CcccHHHHHHHhcccccc
Q 028410 160 AL---FPSRFVGEMERTVKIGGVCMVLMEEC-----------AGREIKQIVELFRTSSFT 205 (209)
Q Consensus 160 ~~---~~~~~l~~~~r~LkpgG~lil~~~~~-----------~~~~~~~~~~l~~~~~~~ 205 (209)
++ ++..+++++.++|||||.++++.... ......++.++|...+++
T Consensus 109 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~f~~~ 168 (199)
T 2xvm_A 109 FLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEGWERV 168 (199)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTTSEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcCCeEE
Confidence 77 56899999999999999987765322 123566777777764443
No 52
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.62 E-value=7.2e-16 Score=116.16 Aligned_cols=105 Identities=11% Similarity=0.112 Sum_probs=88.1
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------CcEEEcCCCCCCCCCCceeeEEcccchhhh-C
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------PLVSRADPHNLPFFDEAFDVAFTAHLAEAL-F 162 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~ 162 (209)
..++.+|||+|||+|..+..+++.+. +++|+|+++.+ +.+..+| .++++++||+|++..+.++. +
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~~~ 90 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSFHDMDD 90 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCSTTCSC
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccchhcccC
Confidence 47888999999999999999999764 99999999864 4566777 77888999999999999888 9
Q ss_pred HHHHHHHHHHhcccCcEEEEEEecCC----------cccHHHHHHHhccccc
Q 028410 163 PSRFVGEMERTVKIGGVCMVLMEECA----------GREIKQIVELFRTSSF 204 (209)
Q Consensus 163 ~~~~l~~~~r~LkpgG~lil~~~~~~----------~~~~~~~~~l~~~~~~ 204 (209)
+..+++++.++|||||.+++...... .....++.+++. ||
T Consensus 91 ~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf 140 (170)
T 3i9f_A 91 KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NF 140 (170)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TE
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--Cc
Confidence 99999999999999999998865432 134567777777 66
No 53
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.61 E-value=4e-15 Score=121.29 Aligned_cols=98 Identities=21% Similarity=0.161 Sum_probs=81.1
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCCC----------------CcEEEcCCCCCCCCCC
Q 028410 85 FKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDSL----------------PLVSRADPHNLPFFDE 147 (209)
Q Consensus 85 ~~~l~~~~~~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~ 147 (209)
+..+.....+.++.+|||+|||+|..+..+++ .|. +|+|+|+|+.+ +.+..+|+.+++ +
T Consensus 53 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~ 128 (287)
T 1kpg_A 53 IDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---E 128 (287)
T ss_dssp HHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---C
T ss_pred HHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---C
Confidence 33444444568899999999999999999995 665 99999999763 347788887665 8
Q ss_pred ceeeEEcccchhhh---CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 148 AFDVAFTAHLAEAL---FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 148 ~fD~i~~~~~~~~~---~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+||+|++..+.+|+ ++..+++++.++|||||.+++....
T Consensus 129 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 129 PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 89999999888887 5799999999999999999988654
No 54
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.61 E-value=8.5e-16 Score=123.88 Aligned_cols=106 Identities=18% Similarity=0.136 Sum_probs=85.2
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC--------------------------------CcEEEcCCCCC
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL--------------------------------PLVSRADPHNL 142 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~--------------------------------~~~~~~d~~~~ 142 (209)
.++.+|||+|||+|..+..|++.|. +|+|+|+|+.+ +.++++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 5788999999999999999999987 99999999762 23678899988
Q ss_pred CCCC-CceeeEEcccchhhh---CHHHHHHHHHHhcccCcEEEEEEecC---------CcccHHHHHHHhcc
Q 028410 143 PFFD-EAFDVAFTAHLAEAL---FPSRFVGEMERTVKIGGVCMVLMEEC---------AGREIKQIVELFRT 201 (209)
Q Consensus 143 ~~~~-~~fD~i~~~~~~~~~---~~~~~l~~~~r~LkpgG~lil~~~~~---------~~~~~~~~~~l~~~ 201 (209)
++++ ++||+|++..+++++ +...+++++.++|||||++++++... -.....++.++|..
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~ 217 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT 217 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC
Confidence 8764 899999987776666 34679999999999999997554221 12456778888875
No 55
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.61 E-value=2.5e-15 Score=116.67 Aligned_cols=92 Identities=23% Similarity=0.295 Sum_probs=77.4
Q ss_pred CCCCCeEEEEcCCCChhHH-HHHhcCCceEEEecCCCCC--------------CcEEEcCCCCCCCCCCceeeEEcccch
Q 028410 94 LFNHSKVLCVSAGAGHEVM-AFNSIGVADVTGVELMDSL--------------PLVSRADPHNLPFFDEAFDVAFTAHLA 158 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~-~la~~~~~~v~~vD~s~~~--------------~~~~~~d~~~~~~~~~~fD~i~~~~~~ 158 (209)
..++.+|||+|||+|..+. .++..+. +++|+|+|+.+ +.+.++|+.++++++++||+|++..+.
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChH
Confidence 3678999999999999854 4445554 99999999863 458899999999989999999998777
Q ss_pred hhh---CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 159 EAL---FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 159 ~~~---~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+|+ ++..+++++.++|||||.+++....
T Consensus 100 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 766 5689999999999999999988754
No 56
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.61 E-value=5.8e-16 Score=126.54 Aligned_cols=91 Identities=20% Similarity=0.250 Sum_probs=80.0
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc-------------------EEEcCCCCCC---CCCCceeeE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL-------------------VSRADPHNLP---FFDEAFDVA 152 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~-------------------~~~~d~~~~~---~~~~~fD~i 152 (209)
.++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++ +..+|+.+++ +++++||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 5788999999999999999999876 9999999987553 5678887777 788999999
Q ss_pred Ecc-cchhhh-C-------HHHHHHHHHHhcccCcEEEEEEec
Q 028410 153 FTA-HLAEAL-F-------PSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 153 ~~~-~~~~~~-~-------~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
++. ++.+|+ + +..+++++.++|||||++++.+..
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 998 788888 8 899999999999999999887754
No 57
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.60 E-value=1.1e-15 Score=126.08 Aligned_cols=91 Identities=19% Similarity=0.185 Sum_probs=79.1
Q ss_pred cCCCCCeEEEEcCCCChhHHHHH--hcCCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFN--SIGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFT 154 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la--~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~ 154 (209)
.+.++.+|||+|||+|..+..++ ..+..+|+|+|+|+.+ +.++++|+.+++++ ++||+|++
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~ 193 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTS 193 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEEC
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEE
Confidence 45889999999999999999995 3455699999999863 45889999999987 99999999
Q ss_pred ccchhhh-CHHH---HHHHHHHhcccCcEEEEEE
Q 028410 155 AHLAEAL-FPSR---FVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 155 ~~~~~~~-~~~~---~l~~~~r~LkpgG~lil~~ 184 (209)
+.+.++. ++.. +++++.++|||||++++..
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 194 NGLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 9888887 7755 7999999999999998876
No 58
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.60 E-value=3.7e-15 Score=122.60 Aligned_cols=99 Identities=16% Similarity=0.071 Sum_probs=82.4
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC----------------CcEEEcCCCCCCCCCC
Q 028410 85 FKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----------------PLVSRADPHNLPFFDE 147 (209)
Q Consensus 85 ~~~l~~~~~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~ 147 (209)
+..+.....++++.+|||+|||+|..+..+++. | .+|+|+|+|+.+ +.+..+|+.++ ++
T Consensus 61 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~ 136 (302)
T 3hem_A 61 RKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DE 136 (302)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CC
T ss_pred HHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CC
Confidence 333444446688999999999999999999985 7 599999999874 34778888776 78
Q ss_pred ceeeEEcccchhhh-CH---------HHHHHHHHHhcccCcEEEEEEecC
Q 028410 148 AFDVAFTAHLAEAL-FP---------SRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 148 ~fD~i~~~~~~~~~-~~---------~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
+||+|++..+.+++ ++ ..+++++.++|||||++++.....
T Consensus 137 ~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 137 PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp CCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred CccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 99999999888888 55 799999999999999999887653
No 59
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.60 E-value=4.1e-15 Score=116.80 Aligned_cols=106 Identities=24% Similarity=0.364 Sum_probs=89.8
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC--------CcEEEcCCCCCCCCCCceeeEEcccchhhh-CHHH
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL--------PLVSRADPHNLPFFDEAFDVAFTAHLAEAL-FPSR 165 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~--------~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~~~~ 165 (209)
.++.+|||+|||+|..+..+++. +|+|+++.+ +.+..+|+.++++++++||+|++.++.+++ ++..
T Consensus 46 ~~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 120 (219)
T 1vlm_A 46 LPEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKRGVFVLKGTAENLPLKDESFDFALMVTTICFVDDPER 120 (219)
T ss_dssp CCSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHTTCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHH
T ss_pred CCCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhcCCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHH
Confidence 34889999999999999988764 899999874 457899999999888999999999998888 8999
Q ss_pred HHHHHHHhcccCcEEEEEEecCC---------------------cccHHHHHHHhcccccc
Q 028410 166 FVGEMERTVKIGGVCMVLMEECA---------------------GREIKQIVELFRTSSFT 205 (209)
Q Consensus 166 ~l~~~~r~LkpgG~lil~~~~~~---------------------~~~~~~~~~l~~~~~~~ 205 (209)
+++++.++|||||.+++...... .....++.+++.++||.
T Consensus 121 ~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~ 181 (219)
T 1vlm_A 121 ALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFE 181 (219)
T ss_dssp HHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCe
Confidence 99999999999999998865432 13567788888888873
No 60
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.60 E-value=2.2e-15 Score=117.97 Aligned_cols=91 Identities=14% Similarity=0.072 Sum_probs=77.7
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC--------------------CcEEEcCCCCCCCCCCceeeEE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL--------------------PLVSRADPHNLPFFDEAFDVAF 153 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~--------------------~~~~~~d~~~~~~~~~~fD~i~ 153 (209)
.++.+|||+|||+|.++..+++. +..+++|+|+|+.+ +.++++|+...+.++++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 57789999999999999999985 44699999999863 4578899888887788999999
Q ss_pred cccchhhh-CH--HHHHHHHHHhcccCcEEEEEEe
Q 028410 154 TAHLAEAL-FP--SRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 154 ~~~~~~~~-~~--~~~l~~~~r~LkpgG~lil~~~ 185 (209)
+..+.+++ ++ ..+++++.++|||||.+++...
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 99999988 44 7899999999999997666544
No 61
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.59 E-value=1.5e-15 Score=119.20 Aligned_cols=92 Identities=17% Similarity=0.174 Sum_probs=71.6
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC-------------cEEEcCCCCC----CCCCCceeeEEc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP-------------LVSRADPHNL----PFFDEAFDVAFT 154 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~-------------~~~~~d~~~~----~~~~~~fD~i~~ 154 (209)
.++++.+|||+|||+|..+..+++. +.++|+|+|+|+.++ .++.+|+.+. +++ ++||+|++
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~ 132 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-EKVDLIYQ 132 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-CCEEEEEE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccc-cceeEEEE
Confidence 4578899999999999999999984 456999999998632 3567788763 444 89999999
Q ss_pred ccchhhhCHHHHHHHHHHhcccCcEEEEEEec
Q 028410 155 AHLAEALFPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 155 ~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+ +..+.+...+++++.++|||||.+++.+..
T Consensus 133 ~-~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~ 163 (210)
T 1nt2_A 133 D-IAQKNQIEILKANAEFFLKEKGEVVIMVKA 163 (210)
T ss_dssp C-CCSTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred e-ccChhHHHHHHHHHHHHhCCCCEEEEEEec
Confidence 6 222223445689999999999999998643
No 62
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.59 E-value=8.3e-15 Score=114.97 Aligned_cols=92 Identities=21% Similarity=0.301 Sum_probs=79.4
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCC--------------CCcEEEcCCCCCCCCCCceeeEEcccc--
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS--------------LPLVSRADPHNLPFFDEAFDVAFTAHL-- 157 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~--------------~~~~~~~d~~~~~~~~~~fD~i~~~~~-- 157 (209)
+.++.+|||+|||+|..+..+++.+. +++++|+|+. .+.++.+|+.++++++++||+|+++.+
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGG
T ss_pred cCCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchH
Confidence 35688999999999999999998765 9999999985 356889999998888899999999877
Q ss_pred hhhh-CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 158 AEAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 158 ~~~~-~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
.++. ++..+++++.++|||||.+++....
T Consensus 115 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 115 HFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp GCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 4444 6789999999999999999887654
No 63
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.59 E-value=1.3e-14 Score=112.13 Aligned_cols=106 Identities=12% Similarity=0.104 Sum_probs=80.6
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-C--CceEEEecCCCC----CCcEEEcCCCCCC----------------------
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G--VADVTGVELMDS----LPLVSRADPHNLP---------------------- 143 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~--~~~v~~vD~s~~----~~~~~~~d~~~~~---------------------- 143 (209)
.++++.+|||+|||+|.++..+++. + ..+|+|+|+++. .+.++++|+.+.+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~ 98 (201)
T 2plw_A 19 FLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKL 98 (201)
T ss_dssp CCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC-----------CHHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCCCCceEEEccccchhhhhhccccccccccchhhHHHH
Confidence 4578899999999999999999984 4 469999999986 3568899998876
Q ss_pred ---CCCCceeeEEcccchhh-----hCH-------HHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhc
Q 028410 144 ---FFDEAFDVAFTAHLAEA-----LFP-------SRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (209)
Q Consensus 144 ---~~~~~fD~i~~~~~~~~-----~~~-------~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~ 200 (209)
+++++||+|+++...++ .+. ..+++++.++|||||.+++.+... .....+.+.++
T Consensus 99 ~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~--~~~~~l~~~l~ 168 (201)
T 2plw_A 99 KEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG--SQTNNLKTYLK 168 (201)
T ss_dssp HHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS--TTHHHHHHHHH
T ss_pred HhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC--CCHHHHHHHHH
Confidence 56789999998643322 122 247899999999999988866543 33445555443
No 64
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.59 E-value=8.3e-16 Score=126.03 Aligned_cols=92 Identities=9% Similarity=0.027 Sum_probs=70.3
Q ss_pred CCCCeEEEEcCCCChhHHHH----Hh-cCCceE--EEecCCCCCCc------------------EEEcCCCCCC------
Q 028410 95 FNHSKVLCVSAGAGHEVMAF----NS-IGVADV--TGVELMDSLPL------------------VSRADPHNLP------ 143 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~l----a~-~~~~~v--~~vD~s~~~~~------------------~~~~d~~~~~------ 143 (209)
.++.+|||||||+|..+..+ +. .+...+ +|+|+|++|++ +..+++.+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 56789999999999766543 22 233444 99999987654 1223333332
Q ss_pred CCCCceeeEEcccchhhh-CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 144 FFDEAFDVAFTAHLAEAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 144 ~~~~~fD~i~~~~~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+++++||+|+++++.+|+ |+..++++++|+|||||++++....
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEec
Confidence 568899999999999999 9999999999999999999988654
No 65
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.59 E-value=3.5e-15 Score=119.77 Aligned_cols=113 Identities=9% Similarity=0.046 Sum_probs=90.2
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC-----------------------------------------
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------------------------------- 131 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------------------------------- 131 (209)
...++.+|||+|||+|..+..++..+..+|+|+|+|+.+
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 335678999999999999999888655699999999762
Q ss_pred ---C-cEEEcCCCCCC-CCC---CceeeEEcccchh----hh-CHHHHHHHHHHhcccCcEEEEEEecC-----------
Q 028410 132 ---P-LVSRADPHNLP-FFD---EAFDVAFTAHLAE----AL-FPSRFVGEMERTVKIGGVCMVLMEEC----------- 187 (209)
Q Consensus 132 ---~-~~~~~d~~~~~-~~~---~~fD~i~~~~~~~----~~-~~~~~l~~~~r~LkpgG~lil~~~~~----------- 187 (209)
+ .+.++|+.+.+ +++ ++||+|++..+.+ +. ++..+++++.++|||||.+++.....
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~ 212 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKF 212 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccc
Confidence 4 67788888854 355 8999999988777 44 67899999999999999998876321
Q ss_pred --CcccHHHHHHHhcccccc
Q 028410 188 --AGREIKQIVELFRTSSFT 205 (209)
Q Consensus 188 --~~~~~~~~~~l~~~~~~~ 205 (209)
.......+.++|..+||.
T Consensus 213 ~~~~~~~~~~~~~l~~aGf~ 232 (265)
T 2i62_A 213 SSLPLGWETVRDAVEEAGYT 232 (265)
T ss_dssp ECCCCCHHHHHHHHHHTTCE
T ss_pred cccccCHHHHHHHHHHCCCE
Confidence 123556888899888883
No 66
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.59 E-value=1.3e-15 Score=119.25 Aligned_cols=110 Identities=15% Similarity=0.139 Sum_probs=89.5
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC---------cEEEcCCCCC---CCCC-CceeeEEcccchhhh
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP---------LVSRADPHNL---PFFD-EAFDVAFTAHLAEAL 161 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~---------~~~~~d~~~~---~~~~-~~fD~i~~~~~~~~~ 161 (209)
.++.+|||+|||+|..+..+++.+. +++|+|+++.++ .+..+|+.++ ++.. ++||+|++.++.++.
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~~~ 129 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALLHQ 129 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCCSS
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhhhh
Confidence 5679999999999999999999865 999999998754 4777777665 5444 459999999877744
Q ss_pred CHHHHHHHHHHhcccCcEEEEEEecCC-----------------------------cccHHHHHHHhcccccc
Q 028410 162 FPSRFVGEMERTVKIGGVCMVLMEECA-----------------------------GREIKQIVELFRTSSFT 205 (209)
Q Consensus 162 ~~~~~l~~~~r~LkpgG~lil~~~~~~-----------------------------~~~~~~~~~l~~~~~~~ 205 (209)
++..+++++.++|||||++++...... .....++.+++..+||.
T Consensus 130 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 202 (227)
T 3e8s_A 130 DIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLR 202 (227)
T ss_dssp CCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEE
T ss_pred hHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCe
Confidence 899999999999999999998875321 12678889999999984
No 67
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.58 E-value=1.1e-14 Score=120.54 Aligned_cols=100 Identities=16% Similarity=0.052 Sum_probs=82.6
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC----------------CcEEEcCCCCCCCCC
Q 028410 84 FFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----------------PLVSRADPHNLPFFD 146 (209)
Q Consensus 84 ~~~~l~~~~~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~ 146 (209)
.+..+.....+.++.+|||+|||+|..+..+++. +. +|+|+|+|+.+ +.+..+|+.+++
T Consensus 78 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 153 (318)
T 2fk8_A 78 KVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--- 153 (318)
T ss_dssp HHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---
T ss_pred HHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---
Confidence 3444444445678999999999999999999985 75 99999999873 447788887764
Q ss_pred CceeeEEcccchhhh---CHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 147 EAFDVAFTAHLAEAL---FPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 147 ~~fD~i~~~~~~~~~---~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
++||+|++..+.+++ ++..+++++.++|||||.+++.....
T Consensus 154 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 154 EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 789999999888877 57999999999999999999887653
No 68
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.58 E-value=4.2e-15 Score=120.30 Aligned_cols=98 Identities=14% Similarity=0.037 Sum_probs=78.5
Q ss_pred HHhcccCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc---------EEEcCCCCCCC-----CCCceeeEE
Q 028410 88 LQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL---------VSRADPHNLPF-----FDEAFDVAF 153 (209)
Q Consensus 88 l~~~~~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~---------~~~~d~~~~~~-----~~~~fD~i~ 153 (209)
+.....+.++.+|||+|||+|..+..+++.+. +|+|+|+|+.|++ .+..++.+++. .+++||+|+
T Consensus 37 il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv 115 (261)
T 3iv6_A 37 DIFLENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVL 115 (261)
T ss_dssp HHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEE
T ss_pred HHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEE
Confidence 33344568899999999999999999999875 9999999998775 34555555443 257999999
Q ss_pred cccchhhh---CHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 154 TAHLAEAL---FPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 154 ~~~~~~~~---~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
++.+.+++ +...+++++.++| |||++++.+...
T Consensus 116 ~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 116 NDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLG 151 (261)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBS
T ss_pred EhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccC
Confidence 99887766 3467999999999 999999888754
No 69
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.58 E-value=3.4e-14 Score=114.88 Aligned_cols=94 Identities=17% Similarity=0.139 Sum_probs=76.8
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCC------C----------------CcEEEcC---CCCCCCC
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS------L----------------PLVSRAD---PHNLPFF 145 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~------~----------------~~~~~~d---~~~~~~~ 145 (209)
.+.++.+|||+|||+|..+..+++. | ..+|+|+|+|+. + +.+..+| ...++++
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 119 (275)
T 3bkx_A 40 QVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIA 119 (275)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCC
Confidence 5678999999999999999999985 3 269999999985 2 3467787 4556778
Q ss_pred CCceeeEEcccchhhh-CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 146 DEAFDVAFTAHLAEAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 146 ~~~fD~i~~~~~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+++||+|++.++.++. ++..+++.+.++++|||.+++....
T Consensus 120 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 120 DQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp TCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred CCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 8999999999998888 7877777777777779999887543
No 70
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.58 E-value=1.3e-14 Score=112.68 Aligned_cols=108 Identities=12% Similarity=0.078 Sum_probs=87.5
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC---------------cEEEcCCCCCCCCCCceeeEEccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP---------------LVSRADPHNLPFFDEAFDVAFTAH 156 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~---------------~~~~~d~~~~~~~~~~fD~i~~~~ 156 (209)
...++.+|||+|||+|..+..+++. +..+|+++|+|+.++ +++.+|+.+.....++||+|++..
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~ 116 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGG 116 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESC
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECC
Confidence 5578899999999999999999985 456999999998733 477888866544457899999976
Q ss_pred chhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 157 LAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 157 ~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
..+ ++..+++++.++|||||++++.... ......+.+.+++.+|
T Consensus 117 ~~~--~~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 117 SGG--MLEEIIDAVDRRLKSEGVIVLNAVT--LDTLTKAVEFLEDHGY 160 (204)
T ss_dssp CTT--CHHHHHHHHHHHCCTTCEEEEEECB--HHHHHHHHHHHHHTTC
T ss_pred CCc--CHHHHHHHHHHhcCCCeEEEEEecc--cccHHHHHHHHHHCCC
Confidence 544 7899999999999999998876544 3467778888888876
No 71
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.58 E-value=3.3e-15 Score=118.46 Aligned_cols=88 Identities=17% Similarity=0.227 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC--------------CcEEEcCCCCCCCCCCceeeEEccc-chh
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL--------------PLVSRADPHNLPFFDEAFDVAFTAH-LAE 159 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~--------------~~~~~~d~~~~~~~~~~fD~i~~~~-~~~ 159 (209)
.++.+|||+|||+|..+..+++.+. +++|+|+|+.+ +.+.++|+.+++++ ++||+|++.. +.+
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTN 113 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGG
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCcccc
Confidence 3778999999999999999999864 99999999863 45788999888876 8999999987 887
Q ss_pred hh----CHHHHHHHHHHhcccCcEEEEEE
Q 028410 160 AL----FPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 160 ~~----~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
|+ ++..+++++.++|||||.+++.+
T Consensus 114 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 114 YIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp GCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 77 45889999999999999998854
No 72
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.58 E-value=6.5e-15 Score=114.44 Aligned_cols=94 Identities=20% Similarity=0.279 Sum_probs=79.8
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC-------------CcEEEcCCCCCCCCCCceeeEEcccchhh
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-------------PLVSRADPHNLPFFDEAFDVAFTAHLAEA 160 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~-------------~~~~~~d~~~~~~~~~~fD~i~~~~~~~~ 160 (209)
+.++.+|||+|||+|..+..+++.+..+++++|+|+.+ +.+.++|+.++++++++||+|++..+.++
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 47889999999999999999999765599999999863 45889999999988899999998765433
Q ss_pred h----------------CHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 161 L----------------FPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 161 ~----------------~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
+ ++..+++++.++|||||.+++.....
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 2 45899999999999999988877653
No 73
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.57 E-value=2.7e-15 Score=119.68 Aligned_cols=107 Identities=17% Similarity=0.112 Sum_probs=84.9
Q ss_pred CCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCCC---------------CcEEEcCCCCCCCC---CCceeeEEcc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDSL---------------PLVSRADPHNLPFF---DEAFDVAFTA 155 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~---~~~fD~i~~~ 155 (209)
.++.+|||+|||+|..+..++. .+..+|+|+|+|+.+ +.++++|+.+++++ +++||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 5788999999999999999996 344699999999853 44788888887654 6899999997
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
.+ .++..+++++.++|||||.+++........+...+.+.++..++
T Consensus 149 ~~---~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~ 194 (240)
T 1xdz_A 149 AV---ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGG 194 (240)
T ss_dssp CC---SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTE
T ss_pred cc---CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCC
Confidence 64 26899999999999999999887554444455667777777766
No 74
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.57 E-value=1.2e-15 Score=121.48 Aligned_cols=92 Identities=8% Similarity=-0.046 Sum_probs=76.7
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC------------cEEEcCCCCCCCCC-----CceeeEEccc
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP------------LVSRADPHNLPFFD-----EAFDVAFTAH 156 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~------------~~~~~d~~~~~~~~-----~~fD~i~~~~ 156 (209)
+.++.+|||+|||+|..+..+++.+. +|+|+|+|+.++ .++++|+.++++.. ..||+|+++.
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcc
Confidence 47889999999999999999999765 999999998744 47888988865432 3499999998
Q ss_pred chhhh---CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 157 LAEAL---FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 157 ~~~~~---~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+.+++ ++..+++++.++|||||++++....
T Consensus 133 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 133 GFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 88877 3589999999999999998777654
No 75
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.57 E-value=4.8e-15 Score=114.62 Aligned_cols=104 Identities=14% Similarity=0.210 Sum_probs=84.3
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC--------------CcEEEcCCCCCCCCCCceeeEEcccchhh
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL--------------PLVSRADPHNLPFFDEAFDVAFTAHLAEA 160 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~--------------~~~~~~d~~~~~~~~~~fD~i~~~~~~~~ 160 (209)
.++ +|||+|||+|..+..+++.+. +++|+|+|+.+ +.+.++|+.++++++++||+|++.....+
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 106 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFCHLP 106 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECCCCC
T ss_pred CCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhhcCC
Confidence 566 999999999999999999865 99999999864 34778999999888899999999643222
Q ss_pred h-CHHHHHHHHHHhcccCcEEEEEEecCC--------------cccHHHHHHHhc
Q 028410 161 L-FPSRFVGEMERTVKIGGVCMVLMEECA--------------GREIKQIVELFR 200 (209)
Q Consensus 161 ~-~~~~~l~~~~r~LkpgG~lil~~~~~~--------------~~~~~~~~~l~~ 200 (209)
. ++..+++++.++|||||.+++...... .....++.++|.
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 161 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP 161 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc
Confidence 2 578999999999999999999875432 235566777776
No 76
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.57 E-value=5.8e-15 Score=120.37 Aligned_cols=110 Identities=17% Similarity=0.269 Sum_probs=89.0
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC--------------cEEEcCCCCCCCCCCceeeEEcccchhh
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP--------------LVSRADPHNLPFFDEAFDVAFTAHLAEA 160 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~--------------~~~~~d~~~~~~~~~~fD~i~~~~~~~~ 160 (209)
.++.+|||+|||+|..+..+++.+. +|+|+|+|+.++ .+.++|+.+.++ +++||+|+++.+.++
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMF 196 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhh
Confidence 4789999999999999999999876 999999998743 478899988877 889999999988887
Q ss_pred hC---HHHHHHHHHHhcccCcEEEEEEecCC-----------cccHHHHHHHhccccccc
Q 028410 161 LF---PSRFVGEMERTVKIGGVCMVLMEECA-----------GREIKQIVELFRTSSFTE 206 (209)
Q Consensus 161 ~~---~~~~l~~~~r~LkpgG~lil~~~~~~-----------~~~~~~~~~l~~~~~~~~ 206 (209)
++ ...+++++.++|||||.++++..... .....++.++|...++++
T Consensus 197 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 256 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKDWEFLE 256 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTTSEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcCCEEEE
Confidence 73 36899999999999999877654321 234556777777655543
No 77
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.57 E-value=1.2e-14 Score=119.32 Aligned_cols=90 Identities=20% Similarity=0.303 Sum_probs=75.9
Q ss_pred CCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC------------------CcEEEcCCCCCCCCCCceeeEEcc-c
Q 028410 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL------------------PLVSRADPHNLPFFDEAFDVAFTA-H 156 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~------------------~~~~~~d~~~~~~~~~~fD~i~~~-~ 156 (209)
++.+|||+|||+|..+..+++.+. +|+|+|+|+.+ +.++++|+.++++ +++||+|++. .
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~ 159 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSG 159 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHH
T ss_pred CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCc
Confidence 445999999999999999999865 99999999863 4588999999987 7899999865 5
Q ss_pred chhhhC---HHHHHHHHHHhcccCcEEEEEEecC
Q 028410 157 LAEALF---PSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 157 ~~~~~~---~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
+.++.+ ...+++++.++|||||.+++.+...
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 566555 4889999999999999999987553
No 78
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.56 E-value=7e-16 Score=122.63 Aligned_cols=91 Identities=15% Similarity=0.032 Sum_probs=74.0
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC--------------cEEEcCCCCC--CCCCCceeeEEc-cc
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP--------------LVSRADPHNL--PFFDEAFDVAFT-AH 156 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~--------------~~~~~d~~~~--~~~~~~fD~i~~-~~ 156 (209)
..++.+|||+|||+|..+..+++.+..+|+|+|+|+.++ .++++|+.++ ++++++||+|++ .+
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 367899999999999999999886556999999998853 3778888887 888999999999 33
Q ss_pred chh----hh-CHHHHHHHHHHhcccCcEEEEEE
Q 028410 157 LAE----AL-FPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 157 ~~~----~~-~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
... +. +...+++++.|+|||||+++++.
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 211 11 34578999999999999987664
No 79
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.56 E-value=6.5e-15 Score=111.60 Aligned_cols=105 Identities=15% Similarity=0.138 Sum_probs=85.9
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC------CcEEEcCCCCCCCCCCceeeEEcccchhhh-------
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL------PLVSRADPHNLPFFDEAFDVAFTAHLAEAL------- 161 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~------~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~------- 161 (209)
.++.+|||+|||+|..+..+++.+ +|+|+|+|+.+ +.++++|+.+ ++++++||+|+++...++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~~~ 98 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALESHRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDDPIIG 98 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHTCSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCCTTTB
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhcccCCeEEECChhh-hcccCCCCEEEECCCCccCCcccccc
Confidence 456799999999999999999986 99999999874 4688999988 6667999999997554432
Q ss_pred ---CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccccc
Q 028410 162 ---FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSFT 205 (209)
Q Consensus 162 ---~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~~ 205 (209)
+...++.++.+.+ |||.+++.... ......+.+++++.+|.
T Consensus 99 ~~~~~~~~~~~~~~~l-pgG~l~~~~~~--~~~~~~l~~~l~~~gf~ 142 (170)
T 3q87_B 99 GGYLGREVIDRFVDAV-TVGMLYLLVIE--ANRPKEVLARLEERGYG 142 (170)
T ss_dssp CCGGGCHHHHHHHHHC-CSSEEEEEEEG--GGCHHHHHHHHHHTTCE
T ss_pred CCcchHHHHHHHHhhC-CCCEEEEEEec--CCCHHHHHHHHHHCCCc
Confidence 2367889999999 99998887755 35677888888888873
No 80
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.56 E-value=8.4e-16 Score=122.56 Aligned_cols=90 Identities=16% Similarity=0.018 Sum_probs=73.0
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc--------------EEEcCCCCC--CCCCCceeeEEcc---
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL--------------VSRADPHNL--PFFDEAFDVAFTA--- 155 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~--------------~~~~d~~~~--~~~~~~fD~i~~~--- 155 (209)
.++.+|||||||+|..+..+++....++++||+|+.+++ ++.+|+.+. ++++++||.|+..
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~ 138 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeee
Confidence 788999999999999999999864459999999998654 566776553 5788999999753
Q ss_pred --cchhhh-CHHHHHHHHHHhcccCcEEEEEE
Q 028410 156 --HLAEAL-FPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 156 --~~~~~~-~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
....+. ++..+++++.|+|||||+++++.
T Consensus 139 ~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 334444 78999999999999999987654
No 81
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.56 E-value=5.5e-14 Score=105.45 Aligned_cols=94 Identities=14% Similarity=0.097 Sum_probs=77.2
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCCCC-----cEEEcCCCCCC--------CCCCceeeEEcccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSLP-----LVSRADPHNLP--------FFDEAFDVAFTAHL 157 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~~~-----~~~~~d~~~~~--------~~~~~fD~i~~~~~ 157 (209)
...++.+|||+|||+|..+..+++. + ..+++++|+++ +. .+..+|+.+.+ +++++||+|+++..
T Consensus 19 ~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~ 97 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMA 97 (180)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccccCcEEEEEcccccchhhhhhhccCCCCceeEEEECCC
Confidence 3578899999999999999999985 3 36999999999 54 47888998876 77889999999755
Q ss_pred hhhh-CH-----------HHHHHHHHHhcccCcEEEEEEecC
Q 028410 158 AEAL-FP-----------SRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 158 ~~~~-~~-----------~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
.++. +. ..+++++.++|||||.+++.....
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 98 PNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred ccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 4433 33 689999999999999988876653
No 82
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.55 E-value=1.8e-15 Score=119.49 Aligned_cols=102 Identities=12% Similarity=0.153 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------CcEEEcCC-CCCCCC-CCceeeEEcccchhhhC
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------PLVSRADP-HNLPFF-DEAFDVAFTAHLAEALF 162 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------~~~~~~d~-~~~~~~-~~~fD~i~~~~~~~~~~ 162 (209)
.++.+|||+|||+|..+..+++.+. +|+|+|+|+.+ +.++++|+ ..+|++ +++||+|+++ .+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-----~~ 120 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-----RG 120 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-----SC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-----CC
Confidence 7889999999999999999999864 99999999874 45889999 568888 8999999996 35
Q ss_pred HHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccccc
Q 028410 163 PSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSFT 205 (209)
Q Consensus 163 ~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~~ 205 (209)
+..+++++.++|||||.++... .......+.+.+.+++|.
T Consensus 121 ~~~~l~~~~~~LkpgG~l~~~~---~~~~~~~~~~~l~~~Gf~ 160 (226)
T 3m33_A 121 PTSVILRLPELAAPDAHFLYVG---PRLNVPEVPERLAAVGWD 160 (226)
T ss_dssp CSGGGGGHHHHEEEEEEEEEEE---SSSCCTHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHcCCCcEEEEeC---CcCCHHHHHHHHHHCCCe
Confidence 7788999999999999987222 234556677788877763
No 83
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.55 E-value=5e-15 Score=113.07 Aligned_cols=93 Identities=13% Similarity=0.193 Sum_probs=72.0
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC---------------cEEEcCCCCCC-CCCCceeeEEcc-
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP---------------LVSRADPHNLP-FFDEAFDVAFTA- 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~---------------~~~~~d~~~~~-~~~~~fD~i~~~- 155 (209)
.++++.+|||+|||+|..+..+++.+ .+|+|+|+|+.++ .+++.+..+++ +.+++||+|+++
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGLS-KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeC
Confidence 45789999999999999999999984 5999999999754 36666666643 457899999886
Q ss_pred cchhh--------h-CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 156 HLAEA--------L-FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 156 ~~~~~--------~-~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
..... . +...+++++.++|||||.+++.+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 22221 1 3467889999999999999988765
No 84
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.55 E-value=1.3e-14 Score=119.09 Aligned_cols=90 Identities=16% Similarity=0.222 Sum_probs=74.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCC-------------------------------------------
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS------------------------------------------- 130 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~------------------------------------------- 130 (209)
.++.+|||+|||+|..+..+++. +..+|+|+|+++.
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 46789999999999999999984 5569999999875
Q ss_pred ------------------------------CCcEEEcCCCCCC-----CCCCceeeEEcccchhhh-------CHHHHHH
Q 028410 131 ------------------------------LPLVSRADPHNLP-----FFDEAFDVAFTAHLAEAL-------FPSRFVG 168 (209)
Q Consensus 131 ------------------------------~~~~~~~d~~~~~-----~~~~~fD~i~~~~~~~~~-------~~~~~l~ 168 (209)
.+.+.++|+...+ +.+++||+|+|..+.+++ ++.++++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 2446677776544 567899999998877554 5688999
Q ss_pred HHHHhcccCcEEEEEE
Q 028410 169 EMERTVKIGGVCMVLM 184 (209)
Q Consensus 169 ~~~r~LkpgG~lil~~ 184 (209)
++.++|||||++++..
T Consensus 205 ~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 205 RIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHEEEEEEEEEEC
T ss_pred HHHHHhCCCcEEEEec
Confidence 9999999999988753
No 85
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.54 E-value=7.2e-14 Score=108.00 Aligned_cols=105 Identities=14% Similarity=0.214 Sum_probs=79.2
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCC----CCcEEEcCCCCCCCC-----------CCceeeEEcccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----LPLVSRADPHNLPFF-----------DEAFDVAFTAHL 157 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~----~~~~~~~d~~~~~~~-----------~~~fD~i~~~~~ 157 (209)
.++++.+|||+|||+|.++..+++. .++|+|+|+++. .+.++++|+.+.+.. .++||+|+++..
T Consensus 22 ~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~ 100 (191)
T 3dou_A 22 VVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEMEEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAM 100 (191)
T ss_dssp CSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCCCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCC
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccccCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCC
Confidence 4588999999999999999999998 469999999986 456899999886521 149999998521
Q ss_pred --------hhhh----CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhc
Q 028410 158 --------AEAL----FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (209)
Q Consensus 158 --------~~~~----~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~ 200 (209)
..+. ....++.++.++|||||.+++.+.... ....+.+.++
T Consensus 101 ~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~--~~~~~~~~l~ 153 (191)
T 3dou_A 101 AKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD--MTNDFIAIWR 153 (191)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST--HHHHHHHHHG
T ss_pred cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC--CHHHHHHHHH
Confidence 1111 125788999999999999988776543 3455555554
No 86
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.54 E-value=1.5e-14 Score=121.73 Aligned_cols=89 Identities=17% Similarity=0.226 Sum_probs=75.7
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCC---------------CCcEEEcCCCCCCCCCCceeeEEcccch
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAHLA 158 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~i~~~~~~ 158 (209)
+.++.+|||+|||+|..+..+++.|..+|+|+|+|+. .+.++++|+.++++++++||+|++..+.
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 4678999999999999999999987779999999951 1458999999999999999999996432
Q ss_pred h---hh-CHHHHHHHHHHhcccCcEEEE
Q 028410 159 E---AL-FPSRFVGEMERTVKIGGVCMV 182 (209)
Q Consensus 159 ~---~~-~~~~~l~~~~r~LkpgG~lil 182 (209)
+ +. ++..++.++.++|||||.++.
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 2 22 778999999999999999763
No 87
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.53 E-value=1.4e-14 Score=113.43 Aligned_cols=108 Identities=14% Similarity=0.132 Sum_probs=84.5
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC---------------CcEEEcCCCCCC--CCCCceeeEEccc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL---------------PLVSRADPHNLP--FFDEAFDVAFTAH 156 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~---------------~~~~~~d~~~~~--~~~~~fD~i~~~~ 156 (209)
.++.+|||+|||+|.++..+++. +..+++|+|+++.+ +.++++|+.+++ +++++||+|+++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 46789999999999999999984 55699999999763 348899999877 7788999999974
Q ss_pred chhhh---------CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 157 LAEAL---------FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 157 ~~~~~---------~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
...+. ....++.++.++|||||.+++.+.. ......+.+.+...+|
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~~~~~g~ 174 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN--RGLFEYSLVSFSQYGM 174 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC--HHHHHHHHHHHHHHTC
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC--HHHHHHHHHHHHHCCC
Confidence 33211 2368999999999999998776543 3345667777777665
No 88
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.53 E-value=5.1e-14 Score=108.20 Aligned_cols=105 Identities=14% Similarity=0.067 Sum_probs=77.6
Q ss_pred ccCCCCCeEEEEcCCCChhHHHHHhc-CC---------ceEEEecCCCCC----CcEE-EcCCCCCC--------CCCCc
Q 028410 92 SLLFNHSKVLCVSAGAGHEVMAFNSI-GV---------ADVTGVELMDSL----PLVS-RADPHNLP--------FFDEA 148 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~G~~~~~la~~-~~---------~~v~~vD~s~~~----~~~~-~~d~~~~~--------~~~~~ 148 (209)
..++++.+|||+|||+|..+..+++. +. .+|+|+|+++.. +.++ .+|+.+.+ +++++
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (196)
T 2nyu_A 18 QILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRR 97 (196)
T ss_dssp CCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEECSCCTTSHHHHHHHHHHSGGGC
T ss_pred CCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEEEeccCCCHHHHHHHHHhcCCCC
Confidence 34588999999999999999999984 53 699999999865 4577 78877643 34578
Q ss_pred eeeEEcccc----hhhh-CH-------HHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHH
Q 028410 149 FDVAFTAHL----AEAL-FP-------SRFVGEMERTVKIGGVCMVLMEECAGREIKQIVEL 198 (209)
Q Consensus 149 fD~i~~~~~----~~~~-~~-------~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l 198 (209)
||+|++... .++. +. ..+++++.++|||||.+++.+... .....+.+.
T Consensus 98 fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~--~~~~~~~~~ 157 (196)
T 2nyu_A 98 ADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG--SQSRRLQRR 157 (196)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS--GGGHHHHHH
T ss_pred CcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC--ccHHHHHHH
Confidence 999998532 2222 33 478999999999999998876543 233444443
No 89
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.53 E-value=1.3e-14 Score=119.84 Aligned_cols=92 Identities=12% Similarity=0.137 Sum_probs=71.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc---------------------EEEcCCC------CC--CCC
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL---------------------VSRADPH------NL--PFF 145 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~---------------------~~~~d~~------~~--~~~ 145 (209)
.++.+|||+|||+|..+..++..+..+|+|+|+|+.|++ +.+.|+. ++ +++
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 357899999999998776666655569999999998653 3455552 22 356
Q ss_pred CCceeeEEcccchhhh----CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 146 DEAFDVAFTAHLAEAL----FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 146 ~~~fD~i~~~~~~~~~----~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+++||+|+|..+.++. +...+++++.++|||||++++.+..
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 7899999997666543 4589999999999999999887763
No 90
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.53 E-value=3.8e-14 Score=113.22 Aligned_cols=99 Identities=16% Similarity=0.257 Sum_probs=77.4
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC--------------CcEEEcCCCCCCCCCCcee
Q 028410 85 FKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL--------------PLVSRADPHNLPFFDEAFD 150 (209)
Q Consensus 85 ~~~l~~~~~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~--------------~~~~~~d~~~~~~~~~~fD 150 (209)
+..+.......++.+|||+|||+|..+..+++.+. +|+|+|+|+.+ +.++++|+.+++++ ++||
T Consensus 30 ~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD 107 (252)
T 1wzn_A 30 VEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFD 107 (252)
T ss_dssp HHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEE
T ss_pred HHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCcc
Confidence 33333333446778999999999999999999875 99999999864 45789999888764 6899
Q ss_pred eEEccc-chhhh---CHHHHHHHHHHhcccCcEEEEEEe
Q 028410 151 VAFTAH-LAEAL---FPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 151 ~i~~~~-~~~~~---~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
+|++.. ..++. +...+++++.++|||||.+++.+.
T Consensus 108 ~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 108 AVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp EEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 999752 33332 458899999999999999887654
No 91
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.53 E-value=3.4e-14 Score=110.21 Aligned_cols=106 Identities=17% Similarity=0.236 Sum_probs=86.9
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC---------------CcEEEcCCCCCCCCCCceeeEEcccch
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAFTAHLA 158 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~i~~~~~~ 158 (209)
+.++.+|||+|||+|..+..+++.+..+++++|+++.+ +.+..+|+.+. .+++||+|+++...
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~fD~i~~~~~~ 135 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD--VDGKFDLIVANILA 135 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--CCSCEEEEEEESCH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc--CCCCceEEEECCcH
Confidence 36789999999999999999998877799999999873 55788888664 46899999997665
Q ss_pred hhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccccc
Q 028410 159 EALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSFT 205 (209)
Q Consensus 159 ~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~~ 205 (209)
++ ...+++++.++|||||.+++.... ..+...+.+++.+.+|.
T Consensus 136 ~~--~~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~~~~~Gf~ 178 (205)
T 3grz_A 136 EI--LLDLIPQLDSHLNEDGQVIFSGID--YLQLPKIEQALAENSFQ 178 (205)
T ss_dssp HH--HHHHGGGSGGGEEEEEEEEEEEEE--GGGHHHHHHHHHHTTEE
T ss_pred HH--HHHHHHHHHHhcCCCCEEEEEecC--cccHHHHHHHHHHcCCc
Confidence 53 478899999999999998886443 34677888888888873
No 92
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.52 E-value=5e-14 Score=109.82 Aligned_cols=105 Identities=7% Similarity=-0.071 Sum_probs=82.9
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTAH 156 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~~~ 156 (209)
...++.+|||+|||+|..+..+++.+ .+|+|+|+++.+ +.++.+|+.+......+||+|++..
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 130 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLAG-GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGG 130 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECS
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECC
Confidence 45788999999999999999999984 599999999874 3477888887333346899999865
Q ss_pred chhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 157 LAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 157 ~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
.. ++. +++++.++|||||++++.... ......+.+.++..++
T Consensus 131 ~~---~~~-~l~~~~~~LkpgG~lv~~~~~--~~~~~~~~~~l~~~g~ 172 (204)
T 3njr_A 131 GG---SQA-LYDRLWEWLAPGTRIVANAVT--LESETLLTQLHARHGG 172 (204)
T ss_dssp CC---CHH-HHHHHHHHSCTTCEEEEEECS--HHHHHHHHHHHHHHCS
T ss_pred cc---cHH-HHHHHHHhcCCCcEEEEEecC--cccHHHHHHHHHhCCC
Confidence 22 567 999999999999998776654 4566777777776654
No 93
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.52 E-value=6.1e-14 Score=109.81 Aligned_cols=92 Identities=16% Similarity=0.102 Sum_probs=74.5
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC-------------------cEEEcCCCCCCCCCCceeeEE
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP-------------------LVSRADPHNLPFFDEAFDVAF 153 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~-------------------~~~~~d~~~~~~~~~~fD~i~ 153 (209)
..++.+|||+|||+|..+..+++. +..+|+|+|+|+.++ .++++|+.++++++++ |.++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~ 103 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELH 103 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEE
Confidence 478899999999999999999995 356999999999733 3789999999987776 7666
Q ss_pred cc---cch--hhh-CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 154 TA---HLA--EAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 154 ~~---~~~--~~~-~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
.. ... ++. ++..+++++.++|||||.+++.+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNL 142 (218)
T ss_dssp EESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEG
T ss_pred EEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecc
Confidence 32 222 244 7799999999999999999987643
No 94
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.52 E-value=5.2e-15 Score=119.05 Aligned_cols=107 Identities=13% Similarity=0.076 Sum_probs=84.2
Q ss_pred CCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCCCC---------------cEEEcCCCCCCCC---CCceeeEEcc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDSLP---------------LVSRADPHNLPFF---DEAFDVAFTA 155 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~~~---------------~~~~~d~~~~~~~---~~~fD~i~~~ 155 (209)
.++.+|||+|||+|..+..++. .+..+|+++|+++.++ .++++|+++++.. +++||+|+++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 5788999999999999999998 4667999999998743 4788888876643 4899999997
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
.+. +...++.++.++|||||++++........+...+.+.++..++
T Consensus 159 a~~---~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~ 204 (249)
T 3g89_A 159 AVA---PLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGG 204 (249)
T ss_dssp SSC---CHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTE
T ss_pred CcC---CHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCC
Confidence 553 4788999999999999998877665444555556666655554
No 95
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.52 E-value=1e-14 Score=114.42 Aligned_cols=108 Identities=16% Similarity=0.179 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCCCC---------------cEEEcCCCCCC--CCCCceeeEEccc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDSLP---------------LVSRADPHNLP--FFDEAFDVAFTAH 156 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~~~---------------~~~~~d~~~~~--~~~~~fD~i~~~~ 156 (209)
.++.+|||+|||+|..+..+++ .+..+++|+|+|+.++ .++++|+.+++ +++++||.|+++.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 4678999999999999999998 4556999999998743 47888888765 6788999998753
Q ss_pred chhh---------hCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 157 LAEA---------LFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 157 ~~~~---------~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
...+ +....+++++.++|||||.+++.+.. ......+.+.+...++
T Consensus 117 ~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~--~~~~~~~~~~~~~~g~ 171 (213)
T 2fca_A 117 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN--RGLFEYSLKSFSEYGL 171 (213)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC--HHHHHHHHHHHHHHTC
T ss_pred CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC--HHHHHHHHHHHHHCCC
Confidence 2211 12378999999999999998877643 3345556666665554
No 96
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.51 E-value=1.2e-14 Score=123.76 Aligned_cols=98 Identities=16% Similarity=0.141 Sum_probs=79.4
Q ss_pred HHHHhcccCCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCC------------------------CCcEEEcCCC
Q 028410 86 KHLQGKSLLFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDS------------------------LPLVSRADPH 140 (209)
Q Consensus 86 ~~l~~~~~~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~------------------------~~~~~~~d~~ 140 (209)
..++....+.++.+|||+|||+|..+..++. .+..+++|||+++. .++++++|+.
T Consensus 163 ~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~ 242 (438)
T 3uwp_A 163 AQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL 242 (438)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTT
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECccc
Confidence 3333334678999999999999999999987 56667999999962 3568899999
Q ss_pred CCCCCC--CceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 141 NLPFFD--EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 141 ~~~~~~--~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
++++++ ..||+|+++.+...-+....+.++.++|||||++++.
T Consensus 243 ~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 243 SEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp SHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEES
T ss_pred CCccccccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEe
Confidence 988754 5799999976654446788899999999999998765
No 97
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.51 E-value=2.3e-14 Score=108.33 Aligned_cols=106 Identities=10% Similarity=0.062 Sum_probs=79.6
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCCc---------------EEEcCCCC-CCCCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLPL---------------VSRADPHN-LPFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~~---------------~~~~d~~~-~~~~~~~fD~i~~~ 155 (209)
...++.+|||+|||+|..+..+++. +..+|+++|+++.+++ ++.+|..+ ++..+++||+|++.
T Consensus 22 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 22 APKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEEC
T ss_pred cccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEEC
Confidence 4578899999999999999999985 4569999999986332 55666644 33323899999998
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccc
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSS 203 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~ 203 (209)
...++ ..+++++.++|||||.+++.... ......+.+.++..+
T Consensus 102 ~~~~~---~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 102 GGLTA---PGVFAAAWKRLPVGGRLVANAVT--VESEQMLWALRKQFG 144 (178)
T ss_dssp C-TTC---TTHHHHHHHTCCTTCEEEEEECS--HHHHHHHHHHHHHHC
T ss_pred CcccH---HHHHHHHHHhcCCCCEEEEEeec--cccHHHHHHHHHHcC
Confidence 76664 78899999999999998776654 344555666666554
No 98
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.51 E-value=1.1e-13 Score=116.08 Aligned_cols=89 Identities=18% Similarity=0.199 Sum_probs=75.1
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCC---------------CCCcEEEcCCCCCCCCCCceeeEEcccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMD---------------SLPLVSRADPHNLPFFDEAFDVAFTAHL 157 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~---------------~~~~~~~~d~~~~~~~~~~fD~i~~~~~ 157 (209)
...++.+|||+|||+|..+..+++.|..+|+|+|+++ ..+.++++|+.++++++++||+|++..+
T Consensus 61 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 61 HIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred hhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 4578899999999999999999998767999999996 1345889999999998899999998653
Q ss_pred ---hhhh-CHHHHHHHHHHhcccCcEEE
Q 028410 158 ---AEAL-FPSRFVGEMERTVKIGGVCM 181 (209)
Q Consensus 158 ---~~~~-~~~~~l~~~~r~LkpgG~li 181 (209)
..+. ++..++.++.++|||||.++
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 2223 46789999999999999987
No 99
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.51 E-value=4.4e-14 Score=111.88 Aligned_cols=88 Identities=22% Similarity=0.295 Sum_probs=72.4
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC-------------cEEEcCCCC----CCCCCCceeeEEc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP-------------LVSRADPHN----LPFFDEAFDVAFT 154 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~-------------~~~~~d~~~----~~~~~~~fD~i~~ 154 (209)
.+.++.+|||+|||+|..+..+++. |.++|+|+|+|+.++ .++.+|+.+ .+++ ++||+|++
T Consensus 71 ~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~ 149 (230)
T 1fbn_A 71 PIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYE 149 (230)
T ss_dssp CCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEE
T ss_pred CCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEE
Confidence 4578899999999999999999985 657999999998643 377899988 7766 78999993
Q ss_pred ccchhhhCH---HHHHHHHHHhcccCcEEEEEEe
Q 028410 155 AHLAEALFP---SRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 155 ~~~~~~~~~---~~~l~~~~r~LkpgG~lil~~~ 185 (209)
++. ++ ..+++++.+.|||||.+++...
T Consensus 150 -~~~---~~~~~~~~l~~~~~~LkpgG~l~i~~~ 179 (230)
T 1fbn_A 150 -DVA---QPNQAEILIKNAKWFLKKGGYGMIAIK 179 (230)
T ss_dssp -CCC---STTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -ecC---ChhHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 221 34 7789999999999999998754
No 100
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.51 E-value=7.1e-14 Score=106.58 Aligned_cols=93 Identities=16% Similarity=0.128 Sum_probs=77.4
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC-----------------CcEEEcCCCCCCCCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-----------------PLVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~-----------------~~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
...++.+|||+|||+|..+..+++.+ .+++++|+++.+ +.+..+|+.+ ++++++||+|+++
T Consensus 49 ~~~~~~~vLdiG~G~G~~~~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~ 126 (194)
T 1dus_A 49 VVDKDDDILDLGCGYGVIGIALADEV-KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITN 126 (194)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEEC
T ss_pred ccCCCCeEEEeCCCCCHHHHHHHHcC-CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEEC
Confidence 44688999999999999999999884 599999999762 5678888877 3457899999998
Q ss_pred cchhh-h-CHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 156 HLAEA-L-FPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 156 ~~~~~-~-~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
...++ . +...+++++.++|||||.+++.....
T Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 127 PPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp CCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred CCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 76554 2 56899999999999999998887764
No 101
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.51 E-value=2.6e-14 Score=112.76 Aligned_cols=111 Identities=15% Similarity=0.184 Sum_probs=86.1
Q ss_pred cCCCCCeEEEEcCC-CChhHHHHHhcCCceEEEecCCCCC--------------CcEEEcCCCCC-CCCCCceeeEEccc
Q 028410 93 LLFNHSKVLCVSAG-AGHEVMAFNSIGVADVTGVELMDSL--------------PLVSRADPHNL-PFFDEAFDVAFTAH 156 (209)
Q Consensus 93 ~~~~~~~iLDiGcG-~G~~~~~la~~~~~~v~~vD~s~~~--------------~~~~~~d~~~~-~~~~~~fD~i~~~~ 156 (209)
.++++.+|||+||| +|..+..+++....+|+|+|+++.+ +.++++|+..+ ++++++||+|+++.
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECC
Confidence 45789999999999 9999999998623599999999874 45788887543 45678999999873
Q ss_pred chhhh--------------------CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 157 LAEAL--------------------FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 157 ~~~~~--------------------~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
...+. ....+++++.++|||||.+++.+... ......+.+.+++.++
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~~~l~~~g~ 198 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK-EKLLNVIKERGIKLGY 198 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC-HHHHHHHHHHHHHTTC
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc-HhHHHHHHHHHHHcCC
Confidence 32211 13789999999999999998876542 3566778888888777
No 102
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.50 E-value=2.7e-14 Score=109.57 Aligned_cols=93 Identities=17% Similarity=0.065 Sum_probs=76.6
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC---------------cEEEcCCCCCC--CCCCceeeEEcccc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP---------------LVSRADPHNLP--FFDEAFDVAFTAHL 157 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~---------------~~~~~d~~~~~--~~~~~fD~i~~~~~ 157 (209)
.++.+|||+|||+|..+..++..+..+|+|+|+|+.++ +++++|+.+.+ +++++||+|+++..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 57889999999999999988887777999999998744 47788877753 45789999999765
Q ss_pred hhhh--CHHHHHHHHHH--hcccCcEEEEEEecC
Q 028410 158 AEAL--FPSRFVGEMER--TVKIGGVCMVLMEEC 187 (209)
Q Consensus 158 ~~~~--~~~~~l~~~~r--~LkpgG~lil~~~~~ 187 (209)
.++. +..+++.++.+ +|||||.+++.....
T Consensus 123 ~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 123 YNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 5542 57889999999 999999998877653
No 103
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.50 E-value=7.8e-14 Score=118.50 Aligned_cols=98 Identities=20% Similarity=0.216 Sum_probs=79.2
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCc
Q 028410 85 FKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEA 148 (209)
Q Consensus 85 ~~~l~~~~~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~ 148 (209)
...+.......++.+|||+|||+|..+..+++.|..+|+|+|+| .+ +.++++|+.+++++ ++
T Consensus 52 ~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 129 (376)
T 3r0q_C 52 FNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EK 129 (376)
T ss_dssp HHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SC
T ss_pred HHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-Cc
Confidence 33343344567889999999999999999999877799999999 63 35889999998876 89
Q ss_pred eeeEEcccchhhh----CHHHHHHHHHHhcccCcEEEEEE
Q 028410 149 FDVAFTAHLAEAL----FPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 149 fD~i~~~~~~~~~----~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
||+|++..+.+.+ .+..++.++.++|||||.+++..
T Consensus 130 ~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 130 VDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred ceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 9999996543333 47889999999999999986654
No 104
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.50 E-value=6e-14 Score=110.89 Aligned_cols=88 Identities=20% Similarity=0.281 Sum_probs=75.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------CcEEEcCCCCCCCCCCceeeEEc-ccchhhh-C
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------PLVSRADPHNLPFFDEAFDVAFT-AHLAEAL-F 162 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------~~~~~~d~~~~~~~~~~fD~i~~-~~~~~~~-~ 162 (209)
.++.+|||+|||+|..+..+++.+. +++|+|+|+.+ +.+..+|+.++++ +++||+|+| ..+.+++ +
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCS
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCC
Confidence 6789999999999999999998754 99999999874 4588999999887 789999995 4466665 3
Q ss_pred ---HHHHHHHHHHhcccCcEEEEEE
Q 028410 163 ---PSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 163 ---~~~~l~~~~r~LkpgG~lil~~ 184 (209)
...+++++.++|||||.+++..
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 4789999999999999998864
No 105
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.49 E-value=5.2e-14 Score=119.76 Aligned_cols=109 Identities=20% Similarity=0.220 Sum_probs=87.9
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC--------------cEEEcCCCCCCCCCCceeeEEcccchhh
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP--------------LVSRADPHNLPFFDEAFDVAFTAHLAEA 160 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~--------------~~~~~d~~~~~~~~~~fD~i~~~~~~~~ 160 (209)
.++.+|||+|||+|..+..+++.+. +|+++|+|+.++ .++.+|+.+.+.++++||+|+++...++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 4678999999999999999999865 999999998743 4889999998877789999999865554
Q ss_pred -----h-CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccccc
Q 028410 161 -----L-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSFT 205 (209)
Q Consensus 161 -----~-~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~~ 205 (209)
. +...++.++.++|||||.++++..... .....+.+.|..++.+
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l-~~~~~l~~~f~~v~~l 360 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFL-KYEPLLEEKFGAFQTL 360 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTS-CHHHHHHHHHSCCEEE
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC-ChHHHHHHhhccEEEE
Confidence 2 468899999999999999988876542 2345566677665543
No 106
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.49 E-value=3.6e-14 Score=114.37 Aligned_cols=109 Identities=17% Similarity=0.215 Sum_probs=84.8
Q ss_pred cCC-CCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCC--CCCCceeeEE
Q 028410 93 LLF-NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLP--FFDEAFDVAF 153 (209)
Q Consensus 93 ~~~-~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~--~~~~~fD~i~ 153 (209)
..+ ++.+|||+|||+|..+..+++.+..+|+|+|+++.+ +.++++|+.+.+ +++++||+|+
T Consensus 45 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 45 YLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp CCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred cCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 346 789999999999999999999755599999999873 457888988865 5578999999
Q ss_pred cccchh-----hh----------------CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 154 TAHLAE-----AL----------------FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 154 ~~~~~~-----~~----------------~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
++.... .. +...+++++.++|||||+++++.. ......+.+.+++.++
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~---~~~~~~~~~~l~~~~~ 193 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR---PERLLDIIDIMRKYRL 193 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC---TTTHHHHHHHHHHTTE
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc---HHHHHHHHHHHHHCCC
Confidence 962211 11 236799999999999999998765 3456677777777666
No 107
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.49 E-value=1.1e-13 Score=113.42 Aligned_cols=88 Identities=11% Similarity=0.016 Sum_probs=70.0
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCcE-E----------EcCCCCCC---CCCCceeeEEcccchhh
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPLV-S----------RADPHNLP---FFDEAFDVAFTAHLAEA 160 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~~-~----------~~d~~~~~---~~~~~fD~i~~~~~~~~ 160 (209)
.++.+|||+|||||.++..+++.|.++|+|+|+++.|+++ . ..|+..++ ++..+||+|++...++
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~- 162 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFI- 162 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSS-
T ss_pred ccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHh-
Confidence 4678999999999999999999887799999999999974 1 12333333 3445699999865544
Q ss_pred hCHHHHHHHHHHhcccCcEEEEEE
Q 028410 161 LFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 161 ~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
+...++.++.|+|||||.+++++
T Consensus 163 -sl~~vL~e~~rvLkpGG~lv~lv 185 (291)
T 3hp7_A 163 -SLNLILPALAKILVDGGQVVALV 185 (291)
T ss_dssp -CGGGTHHHHHHHSCTTCEEEEEE
T ss_pred -hHHHHHHHHHHHcCcCCEEEEEE
Confidence 45889999999999999998873
No 108
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.49 E-value=3.4e-14 Score=109.47 Aligned_cols=94 Identities=13% Similarity=0.183 Sum_probs=75.2
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCCCC----------------cEEEcCCCCCC-CCCCceeeEE
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSLP----------------LVSRADPHNLP-FFDEAFDVAF 153 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~~~----------------~~~~~d~~~~~-~~~~~fD~i~ 153 (209)
.++++.+|||+|||+|..+..+++. +.++++|+|+++.++ .++++|+.+++ +.+++||+|+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 3478899999999999999999985 456999999998633 47888888775 5678999999
Q ss_pred cccch---------hhh-CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 154 TAHLA---------EAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 154 ~~~~~---------~~~-~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
++... ... +...+++++.++|||||.+++....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 86422 111 3467999999999999999888744
No 109
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.49 E-value=5.8e-14 Score=115.11 Aligned_cols=91 Identities=16% Similarity=0.117 Sum_probs=73.1
Q ss_pred cccCCCCCeEEEEcCCCChhH-HHHHhcCCceEEEecCCCCCC---------------cEEEcCCCCCCCCCCceeeEEc
Q 028410 91 KSLLFNHSKVLCVSAGAGHEV-MAFNSIGVADVTGVELMDSLP---------------LVSRADPHNLPFFDEAFDVAFT 154 (209)
Q Consensus 91 ~~~~~~~~~iLDiGcG~G~~~-~~la~~~~~~v~~vD~s~~~~---------------~~~~~d~~~~~~~~~~fD~i~~ 154 (209)
...++++.+|||||||+|..+ ..+++....+|+|+|+++.++ +++++|+.+++ +++||+|++
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~ 194 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMV 194 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEE
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEE
Confidence 346799999999999998765 455664345999999999744 47888888865 789999998
Q ss_pred ccchhhhCHHHHHHHHHHhcccCcEEEEEEe
Q 028410 155 AHLAEALFPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 155 ~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
... .-++.++++++.++|||||++++...
T Consensus 195 ~a~--~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 195 AAL--AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp CTT--CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCC--ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 544 23789999999999999999887654
No 110
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.48 E-value=8.6e-14 Score=110.24 Aligned_cols=87 Identities=17% Similarity=0.167 Sum_probs=74.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC--------------CcEEEcCCCCCCCCCCceeeEEccc-chh
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL--------------PLVSRADPHNLPFFDEAFDVAFTAH-LAE 159 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~--------------~~~~~~d~~~~~~~~~~fD~i~~~~-~~~ 159 (209)
.++.+|||+|||+|..+..+++. .+++|+|+|+.+ +.+.++|+.+++++ ++||+|++.. +.+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLN 108 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGG
T ss_pred CCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchh
Confidence 67799999999999999999887 599999999863 45788999888875 8999999874 666
Q ss_pred hh----CHHHHHHHHHHhcccCcEEEEEE
Q 028410 160 AL----FPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 160 ~~----~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
++ ++..+++++.++|||||.+++.+
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 65 35788999999999999998854
No 111
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.47 E-value=1.7e-13 Score=108.50 Aligned_cols=111 Identities=15% Similarity=0.124 Sum_probs=82.3
Q ss_pred ccCCCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCC-------------CCcEEEcCCCC---CCCCCCceeeEE
Q 028410 92 SLLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS-------------LPLVSRADPHN---LPFFDEAFDVAF 153 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~-------------~~~~~~~d~~~---~~~~~~~fD~i~ 153 (209)
..+.++.+|||+|||+|.++..+++. +.++|+|+|+|+. .+.++.+|+.+ +++.+++||+|+
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~ 152 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIF 152 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEE
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEE
Confidence 34578899999999999999999985 3469999999964 34578899987 455678999999
Q ss_pred cccchhhhC-HHHHHHHHHHhcccCcEEEEEEecCC---ccc----HHHHHHHhccccc
Q 028410 154 TAHLAEALF-PSRFVGEMERTVKIGGVCMVLMEECA---GRE----IKQIVELFRTSSF 204 (209)
Q Consensus 154 ~~~~~~~~~-~~~~l~~~~r~LkpgG~lil~~~~~~---~~~----~~~~~~l~~~~~~ 204 (209)
++.. ..+ ...++.++.++|||||.+++.+.... ... +..-.+.+...||
T Consensus 153 ~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 209 (233)
T 2ipx_A 153 ADVA--QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENM 209 (233)
T ss_dssp ECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTE
T ss_pred EcCC--CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCC
Confidence 9543 222 35568899999999999999765421 011 1112577777777
No 112
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.47 E-value=2.4e-13 Score=110.32 Aligned_cols=91 Identities=19% Similarity=0.062 Sum_probs=71.3
Q ss_pred ccCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCC----------------CCcEE--EcCCCCCCCCCCceeeEE
Q 028410 92 SLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVS--RADPHNLPFFDEAFDVAF 153 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~----------------~~~~~--~~d~~~~~~~~~~fD~i~ 153 (209)
..++++.+|||+|||+|.++..+++. ++|+|+|+++. .+.++ ++|+.+++ +++||+|+
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~ 145 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIM 145 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEE
T ss_pred CCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEE
Confidence 45688999999999999999999988 69999999884 12356 78888865 78999999
Q ss_pred cccchhhh-C----HH---HHHHHHHHhcccCc--EEEEEEecC
Q 028410 154 TAHLAEAL-F----PS---RFVGEMERTVKIGG--VCMVLMEEC 187 (209)
Q Consensus 154 ~~~~~~~~-~----~~---~~l~~~~r~LkpgG--~lil~~~~~ 187 (209)
|+.. ++. + .. .++.++.++||||| .+++-+..+
T Consensus 146 sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~ 188 (265)
T 2oxt_A 146 CDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCP 188 (265)
T ss_dssp ECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCT
T ss_pred EeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCC
Confidence 9644 221 2 12 37899999999999 888766543
No 113
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.47 E-value=2e-13 Score=113.73 Aligned_cols=109 Identities=15% Similarity=0.101 Sum_probs=86.5
Q ss_pred CCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCC----------------CCcEEEcCCCCCCCCCCceeeEEccc
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTAH 156 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~i~~~~ 156 (209)
..+..+|||+|||+|..+..+++ .+..+++++|+ +. .+++..+|+. .+++. +||+|++.+
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~ 243 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSA 243 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEES
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEeh
Confidence 35678999999999999999988 45569999998 54 2458889987 45555 899999999
Q ss_pred chhhh-CH--HHHHHHHHHhcccCcEEEEEEecCC-------------------cccHHHHHHHhcccccc
Q 028410 157 LAEAL-FP--SRFVGEMERTVKIGGVCMVLMEECA-------------------GREIKQIVELFRTSSFT 205 (209)
Q Consensus 157 ~~~~~-~~--~~~l~~~~r~LkpgG~lil~~~~~~-------------------~~~~~~~~~l~~~~~~~ 205 (209)
+.++. ++ .+++++++++|||||++++.....+ .....++.++++++||.
T Consensus 244 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~ 314 (332)
T 3i53_A 244 VLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLA 314 (332)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEE
T ss_pred hhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCE
Confidence 99888 43 7899999999999999988754322 13456677788888874
No 114
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.47 E-value=4.6e-14 Score=115.15 Aligned_cols=107 Identities=14% Similarity=0.119 Sum_probs=86.8
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEcccc
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTAHL 157 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~~~~ 157 (209)
.+++.+|||+|||+|.++..+++.+..+|+|+|+|+.+ +.++++|+.+++. +++||+|+++..
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc
Confidence 37799999999999999999999765479999999873 3478999998876 789999999643
Q ss_pred hhhhCHHHHHHHHHHhcccCcEEEEEEecC----CcccHHHHHHHhccccc
Q 028410 158 AEALFPSRFVGEMERTVKIGGVCMVLMEEC----AGREIKQIVELFRTSSF 204 (209)
Q Consensus 158 ~~~~~~~~~l~~~~r~LkpgG~lil~~~~~----~~~~~~~~~~l~~~~~~ 204 (209)
. ....++.++.++|||||.+++..... .......+.+.++..++
T Consensus 202 ~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~ 249 (278)
T 2frn_A 202 V---RTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGY 249 (278)
T ss_dssp S---SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTC
T ss_pred h---hHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCC
Confidence 2 34678899999999999998887653 24566777888877766
No 115
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.47 E-value=1.9e-13 Score=108.73 Aligned_cols=111 Identities=19% Similarity=0.180 Sum_probs=78.4
Q ss_pred ccCCCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCCC-------------CcEEEcCCCCCC---CCCCceeeEE
Q 028410 92 SLLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSL-------------PLVSRADPHNLP---FFDEAFDVAF 153 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~~-------------~~~~~~d~~~~~---~~~~~fD~i~ 153 (209)
..++++.+|||+|||+|..+..+++. +.++|+|+|+++.+ +.++++|+.... ...++||+|+
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~ 151 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLY 151 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEE
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEE
Confidence 34689999999999999999999984 46799999999954 347788987643 1246899999
Q ss_pred cccchhhhCHHHHH-HHHHHhcccCcEEEEEEecCC-------cccHHHHHHHhccccc
Q 028410 154 TAHLAEALFPSRFV-GEMERTVKIGGVCMVLMEECA-------GREIKQIVELFRTSSF 204 (209)
Q Consensus 154 ~~~~~~~~~~~~~l-~~~~r~LkpgG~lil~~~~~~-------~~~~~~~~~l~~~~~~ 204 (209)
++... .+....+ ..+.+.|||||++++.+.... ...+....+.++..+|
T Consensus 152 ~d~a~--~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf 208 (232)
T 3id6_C 152 VDIAQ--PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNF 208 (232)
T ss_dssp ECCCC--TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTE
T ss_pred ecCCC--hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCC
Confidence 86332 2444444 556669999999998864321 2233445555555555
No 116
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.47 E-value=1.1e-13 Score=111.69 Aligned_cols=88 Identities=23% Similarity=0.258 Sum_probs=74.9
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC----------CcEEEcCCCCCCCCCCceeeEEcccchhhhCH
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----------PLVSRADPHNLPFFDEAFDVAFTAHLAEALFP 163 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~----------~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~ 163 (209)
.++.+|||+|||+|..+..+++. +..+++|+|+|+.+ +.+..+|+.++++++++||+|++....
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~----- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP----- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-----
Confidence 67889999999999999999985 34599999999874 458899999999989999999986542
Q ss_pred HHHHHHHHHhcccCcEEEEEEecCC
Q 028410 164 SRFVGEMERTVKIGGVCMVLMEECA 188 (209)
Q Consensus 164 ~~~l~~~~r~LkpgG~lil~~~~~~ 188 (209)
..++++.++|||||.+++.....+
T Consensus 159 -~~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 159 -CKAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp -CCHHHHHHHEEEEEEEEEEEECTT
T ss_pred -hhHHHHHHhcCCCcEEEEEEcCHH
Confidence 347999999999999998877643
No 117
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.47 E-value=4.9e-14 Score=119.64 Aligned_cols=90 Identities=16% Similarity=0.232 Sum_probs=73.5
Q ss_pred CCCCeEEEEcCC------CChhHHHHHh-c-CCceEEEecCCCCCC------cEEEcCCCCCCCC------CCceeeEEc
Q 028410 95 FNHSKVLCVSAG------AGHEVMAFNS-I-GVADVTGVELMDSLP------LVSRADPHNLPFF------DEAFDVAFT 154 (209)
Q Consensus 95 ~~~~~iLDiGcG------~G~~~~~la~-~-~~~~v~~vD~s~~~~------~~~~~d~~~~~~~------~~~fD~i~~ 154 (209)
.++.+||||||| +|..+..+++ + +.++|+|+|+|+.+. .++++|+.++++. +++||+|++
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVis 294 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHVDELRIRTIQGDQNDAEFLDRIARRYGPFDIVID 294 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGGCBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEE
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhhcCCCcEEEEecccccchhhhhhcccCCccEEEE
Confidence 567899999999 6666666665 3 567999999999854 4889999998887 789999999
Q ss_pred ccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 155 AHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 155 ~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
....+..+...+++++.++|||||++++..
T Consensus 295 dgsH~~~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 295 DGSHINAHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp CSCCCHHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCcccchhHHHHHHHHHHhcCCCeEEEEEe
Confidence 654322278899999999999999988863
No 118
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.46 E-value=2.1e-13 Score=111.22 Aligned_cols=91 Identities=13% Similarity=0.007 Sum_probs=71.1
Q ss_pred ccCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCC----------------CCcEE--EcCCCCCCCCCCceeeEE
Q 028410 92 SLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVS--RADPHNLPFFDEAFDVAF 153 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~----------------~~~~~--~~d~~~~~~~~~~fD~i~ 153 (209)
..++++.+|||+|||+|.++..+++. ++|+|+|+++. .+.++ ++|+.+++ +++||+|+
T Consensus 78 ~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vv 153 (276)
T 2wa2_A 78 GGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVL 153 (276)
T ss_dssp TSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEE
T ss_pred CCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEE
Confidence 45688999999999999999999988 59999999883 12356 77887765 78999999
Q ss_pred cccchhhh-C----HH---HHHHHHHHhcccCc--EEEEEEecC
Q 028410 154 TAHLAEAL-F----PS---RFVGEMERTVKIGG--VCMVLMEEC 187 (209)
Q Consensus 154 ~~~~~~~~-~----~~---~~l~~~~r~LkpgG--~lil~~~~~ 187 (209)
|+.. ++. + .. .++.++.++||||| .+++.+..+
T Consensus 154 sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~ 196 (276)
T 2wa2_A 154 CDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNP 196 (276)
T ss_dssp ECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCC
T ss_pred ECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCC
Confidence 9644 221 2 11 47899999999999 888765553
No 119
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.46 E-value=4.9e-13 Score=113.15 Aligned_cols=115 Identities=14% Similarity=0.081 Sum_probs=89.2
Q ss_pred HHhcccCCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCC----------------CCcEEEcCCCCCCCCCCcee
Q 028410 88 LQGKSLLFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFD 150 (209)
Q Consensus 88 l~~~~~~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD 150 (209)
+.......+..+|||+|||+|..+..+++ .+..+++++|+ +. .+.+..+|+. .+++. .||
T Consensus 194 l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D 270 (369)
T 3gwz_A 194 VAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GAD 270 (369)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCS
T ss_pred HHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-Cce
Confidence 33333457789999999999999999988 45569999998 54 2558889988 55655 899
Q ss_pred eEEcccchhhhC-HH--HHHHHHHHhcccCcEEEEEEecCCc---------------------ccHHHHHHHhcccccc
Q 028410 151 VAFTAHLAEALF-PS--RFVGEMERTVKIGGVCMVLMEECAG---------------------REIKQIVELFRTSSFT 205 (209)
Q Consensus 151 ~i~~~~~~~~~~-~~--~~l~~~~r~LkpgG~lil~~~~~~~---------------------~~~~~~~~l~~~~~~~ 205 (209)
+|++.++.++.+ +. +++++++++|||||++++.....+. ....++.++++++||.
T Consensus 271 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~ 349 (369)
T 3gwz_A 271 VYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLR 349 (369)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEE
T ss_pred EEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCe
Confidence 999999988884 33 7999999999999999887644322 3455677788888873
No 120
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.46 E-value=1.1e-13 Score=114.42 Aligned_cols=92 Identities=13% Similarity=0.168 Sum_probs=76.0
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------------CcEEEcCCCCCC----CC--C
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------------PLVSRADPHNLP----FF--D 146 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------------~~~~~~d~~~~~----~~--~ 146 (209)
.++.+|||+|||+|..+..+++.+..+++|+|+|+.+ +.++++|+.+++ ++ +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 4788999999999999999998655699999999874 357899999876 53 4
Q ss_pred CceeeEEcccchhhh-----CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 147 EAFDVAFTAHLAEAL-----FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 147 ~~fD~i~~~~~~~~~-----~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
++||+|++..+.++. ++..++.++.++|||||.+++.+..
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 599999998777654 3479999999999999999888764
No 121
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.46 E-value=1.7e-13 Score=104.22 Aligned_cols=106 Identities=13% Similarity=0.100 Sum_probs=83.9
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCCCCC-CceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPFFD-EAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~-~~fD~i~~~ 155 (209)
...++.+|||+|||+|..+..+++.+ .+++++|+++.+ +.+..+|+.+ ++++ ++||+|++.
T Consensus 30 ~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~ 107 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVG 107 (192)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEES
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEEC
Confidence 45788999999999999999999976 699999999853 3466677655 2333 689999997
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
...+ +...+++++.++|||||.+++.... ......+.+.+++.+|
T Consensus 108 ~~~~--~~~~~l~~~~~~l~~gG~l~~~~~~--~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 108 GSGG--ELQEILRIIKDKLKPGGRIIVTAIL--LETKFEAMECLRDLGF 152 (192)
T ss_dssp CCTT--CHHHHHHHHHHTEEEEEEEEEEECB--HHHHHHHHHHHHHTTC
T ss_pred CchH--HHHHHHHHHHHhcCCCcEEEEEecC--cchHHHHHHHHHHCCC
Confidence 6543 4689999999999999998877654 4456677778887776
No 122
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.46 E-value=5.2e-13 Score=110.99 Aligned_cols=109 Identities=15% Similarity=0.233 Sum_probs=87.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEcccc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTAHL 157 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~~~~ 157 (209)
.++.+|||+|||+|..+..+++. +..+++++|++ .+ +.+..+|+.+.+++++ ||+|++.++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~ 241 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNF 241 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcch
Confidence 67899999999999999999984 55699999998 52 4588999988777654 999999988
Q ss_pred hhhhC-H--HHHHHHHHHhcccCcEEEEEEecCC------------------------cccHHHHHHHhcccccc
Q 028410 158 AEALF-P--SRFVGEMERTVKIGGVCMVLMEECA------------------------GREIKQIVELFRTSSFT 205 (209)
Q Consensus 158 ~~~~~-~--~~~l~~~~r~LkpgG~lil~~~~~~------------------------~~~~~~~~~l~~~~~~~ 205 (209)
.++.+ + .++++++.++|||||++++...... .....++.++++++||.
T Consensus 242 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~ 316 (335)
T 2r3s_A 242 LHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFS 316 (335)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCS
T ss_pred hccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCC
Confidence 88772 3 6899999999999999888754322 12356677777777773
No 123
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.46 E-value=1.5e-12 Score=108.36 Aligned_cols=89 Identities=13% Similarity=0.082 Sum_probs=73.9
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCCCC----------------cEEEcCCCCCCCCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDSLP----------------LVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~~~----------------~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
.+.+ .+|||+|||+|..+..+++ .+..+++++|+ +.++ .++.+|+.+ +++ ++||+|++.
T Consensus 165 ~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~ 240 (334)
T 2ip2_A 165 DFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLS 240 (334)
T ss_dssp CCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEE
T ss_pred CCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEc
Confidence 3455 8999999999999999988 45569999999 8754 377888877 555 689999999
Q ss_pred cchhhh-CH--HHHHHHHHHhcccCcEEEEEEe
Q 028410 156 HLAEAL-FP--SRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 156 ~~~~~~-~~--~~~l~~~~r~LkpgG~lil~~~ 185 (209)
++.++. ++ .++++++.++|||||++++...
T Consensus 241 ~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 241 RIIGDLDEAASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred hhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 988877 44 3899999999999999988853
No 124
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.46 E-value=1.8e-13 Score=106.06 Aligned_cols=98 Identities=14% Similarity=0.117 Sum_probs=78.9
Q ss_pred CCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC---------------CcEEEcCCCCCCCCCCceeeEEcccchh
Q 028410 96 NHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~i~~~~~~~ 159 (209)
++.+|||+|||+|..+..++.. +..+++++|+|+.+ +.+..+|+.+.+ ++++||+|+++.+.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~~- 142 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAFA- 142 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCSS-
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEeccC-
Confidence 5789999999999999999984 55699999999863 457889988876 56799999986542
Q ss_pred hhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhc
Q 028410 160 ALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (209)
Q Consensus 160 ~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~ 200 (209)
+...++.++.++|||||.+++.... .....+.++++
T Consensus 143 --~~~~~l~~~~~~L~~gG~l~~~~~~---~~~~~~~~~~~ 178 (207)
T 1jsx_A 143 --SLNDMVSWCHHLPGEQGRFYALKGQ---MPEDEIALLPE 178 (207)
T ss_dssp --SHHHHHHHHTTSEEEEEEEEEEESS---CCHHHHHTSCT
T ss_pred --CHHHHHHHHHHhcCCCcEEEEEeCC---CchHHHHHHhc
Confidence 5789999999999999998887653 34555666554
No 125
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.46 E-value=2.6e-13 Score=114.08 Aligned_cols=91 Identities=16% Similarity=0.130 Sum_probs=75.7
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCC---------------CCCcEEEcCCCCCCCCCCceeeEEcccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMD---------------SLPLVSRADPHNLPFFDEAFDVAFTAHL 157 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~---------------~~~~~~~~d~~~~~~~~~~fD~i~~~~~ 157 (209)
...++.+|||+|||+|..+..+++.|..+|+|+|+|+ ..+.++.+|+.+++++ ++||+|++..+
T Consensus 47 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~ 125 (348)
T 2y1w_A 47 TDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPM 125 (348)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCC
T ss_pred ccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCc
Confidence 4468899999999999999999988767999999996 1345889999998765 68999999876
Q ss_pred hhhh---CHHHHHHHHHHhcccCcEEEEEE
Q 028410 158 AEAL---FPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 158 ~~~~---~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
.+++ .....+.++.+.|||||.+++..
T Consensus 126 ~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 126 GYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp BTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred hhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 5554 35678889999999999987654
No 126
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.45 E-value=3.9e-13 Score=109.47 Aligned_cols=94 Identities=16% Similarity=0.017 Sum_probs=76.1
Q ss_pred CCCCeEEEEcCCC---ChhHHHHHh-cCCceEEEecCCCCCC-------------cEEEcCCCCCC-----------CCC
Q 028410 95 FNHSKVLCVSAGA---GHEVMAFNS-IGVADVTGVELMDSLP-------------LVSRADPHNLP-----------FFD 146 (209)
Q Consensus 95 ~~~~~iLDiGcG~---G~~~~~la~-~~~~~v~~vD~s~~~~-------------~~~~~d~~~~~-----------~~~ 146 (209)
....+|||+|||+ |..+..+.+ .+..+|+++|+|+.|+ .++.+|+.+.+ ++.
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 3458999999999 988776665 3446999999998753 47889987631 333
Q ss_pred CceeeEEcccchhhh-C--HHHHHHHHHHhcccCcEEEEEEecCC
Q 028410 147 EAFDVAFTAHLAEAL-F--PSRFVGEMERTVKIGGVCMVLMEECA 188 (209)
Q Consensus 147 ~~fD~i~~~~~~~~~-~--~~~~l~~~~r~LkpgG~lil~~~~~~ 188 (209)
++||+|++..+.+++ + +..+++++.++|||||++++.....+
T Consensus 156 ~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp TSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred CCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 589999999998888 4 79999999999999999999887653
No 127
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.45 E-value=2.9e-13 Score=102.32 Aligned_cols=103 Identities=12% Similarity=0.134 Sum_probs=84.4
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC---------------CcEEEcCCCCCCCCCCceeeEEcccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAFTAHL 157 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~i~~~~~ 157 (209)
...++.+|||+|||+|..+..+++ +..+++++|+++.+ +.++.+|+.+ ++++++||+|+++..
T Consensus 32 ~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 32 NLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT 109 (183)
T ss_dssp CCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc
Confidence 456788999999999999999999 45699999999863 4477888877 667789999999877
Q ss_pred hhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 158 AEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 158 ~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
.++..+++++.++ |||.+++.... ......+.+.+++.++
T Consensus 110 ---~~~~~~l~~~~~~--~gG~l~~~~~~--~~~~~~~~~~l~~~g~ 149 (183)
T 2yxd_A 110 ---KNIEKIIEILDKK--KINHIVANTIV--LENAAKIINEFESRGY 149 (183)
T ss_dssp ---SCHHHHHHHHHHT--TCCEEEEEESC--HHHHHHHHHHHHHTTC
T ss_pred ---ccHHHHHHHHhhC--CCCEEEEEecc--cccHHHHHHHHHHcCC
Confidence 5688999999998 99998877643 4567778888887775
No 128
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.45 E-value=2.6e-13 Score=113.25 Aligned_cols=87 Identities=17% Similarity=0.192 Sum_probs=73.5
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCC---------------CCcEEEcCCCCCCCCCCceeeEEcccchh
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~i~~~~~~~ 159 (209)
.++.+|||+|||+|..+..+++.|..+|+|+|+++. .+.++.+|+.++++++++||+|++..+.+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 578899999999999999999987779999999941 24478999999988889999999974433
Q ss_pred h---h-CHHHHHHHHHHhcccCcEEE
Q 028410 160 A---L-FPSRFVGEMERTVKIGGVCM 181 (209)
Q Consensus 160 ~---~-~~~~~l~~~~r~LkpgG~li 181 (209)
. . .+..++.++.++|||||.++
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 2 2 57889999999999999986
No 129
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.45 E-value=3.7e-14 Score=111.81 Aligned_cols=104 Identities=14% Similarity=0.149 Sum_probs=77.7
Q ss_pred CCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCCCC---------------cEEEcCCCCC-C--CCCCceeeEEcc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDSLP---------------LVSRADPHNL-P--FFDEAFDVAFTA 155 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~~~---------------~~~~~d~~~~-~--~~~~~fD~i~~~ 155 (209)
+++.+|||+|||+|..+..+++ .+..+|+|+|+|+.++ .++++|+.++ + +++++||.|+++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 4678999999999999999998 4556899999998744 3778887773 3 678999999986
Q ss_pred cchhhh---------CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhc
Q 028410 156 HLAEAL---------FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (209)
Q Consensus 156 ~~~~~~---------~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~ 200 (209)
....+. ....+++++.++|||||.+++.+... .....+.+.+.
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~--~~~~~~~~~~~ 164 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE--PYAEHMLEVMS 164 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCH--HHHHHHHHHHH
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCH--HHHHHHHHHHH
Confidence 322111 11369999999999999988777542 23444555554
No 130
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.44 E-value=1.3e-13 Score=107.26 Aligned_cols=88 Identities=18% Similarity=0.215 Sum_probs=74.2
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC---------------CcEEEcCCCCCCCCCCceeeEEcccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAFTAHL 157 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~i~~~~~ 157 (209)
...++.+|||+|||+|..+..+++.+ .+|+++|+++.+ +.+..+|+.+...++++||+|++...
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~ 152 (210)
T 3lbf_A 74 ELTPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAA 152 (210)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSB
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccc
Confidence 55789999999999999999999984 599999999863 34788888887666789999999877
Q ss_pred hhhhCHHHHHHHHHHhcccCcEEEEEEec
Q 028410 158 AEALFPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 158 ~~~~~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
.+++. .++.+.|||||++++.+..
T Consensus 153 ~~~~~-----~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 153 PPEIP-----TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CSSCC-----THHHHTEEEEEEEEEEECS
T ss_pred hhhhh-----HHHHHhcccCcEEEEEEcC
Confidence 66662 2689999999999998876
No 131
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.44 E-value=4.6e-13 Score=113.70 Aligned_cols=110 Identities=10% Similarity=0.045 Sum_probs=84.3
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC------------------cEEEcCCCCCCCCCCceeeEEc
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP------------------LVSRADPHNLPFFDEAFDVAFT 154 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~------------------~~~~~d~~~~~~~~~~fD~i~~ 154 (209)
..++.+|||+|||+|.++..+++. +..+|+++|+|+.++ .+..+|+.+ ++++++||+|++
T Consensus 220 ~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~ 298 (375)
T 4dcm_A 220 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLC 298 (375)
T ss_dssp CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEE
T ss_pred ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEE
Confidence 345689999999999999999985 356999999998743 257888877 567789999999
Q ss_pred ccchhhh------CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccccc
Q 028410 155 AHLAEAL------FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSFT 205 (209)
Q Consensus 155 ~~~~~~~------~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~~ 205 (209)
+..+++. ...++++++.++|||||.++++...... ....+.+.|+.+..+
T Consensus 299 nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~-~~~~l~~~fg~~~~~ 354 (375)
T 4dcm_A 299 NPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD-YFHKLKKIFGNCTTI 354 (375)
T ss_dssp CCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSC-HHHHHHHHHSCCEEE
T ss_pred CCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcC-HHHHHHHhcCCEEEE
Confidence 7554432 1257899999999999999998766533 345677788876654
No 132
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.44 E-value=1.6e-13 Score=108.63 Aligned_cols=90 Identities=12% Similarity=0.082 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCC-C------------------CcEEEcCCCCCCCC-CCceeeEE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDS-L------------------PLVSRADPHNLPFF-DEAFDVAF 153 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~-~------------------~~~~~~d~~~~~~~-~~~fD~i~ 153 (209)
.++.+|||+|||+|..+..+++ .+..+|+|+|+|+. + +.+.++|+.++|.. .+.+|.+.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 6788999999999999999996 34468999999943 3 23778888887532 25566665
Q ss_pred cccc----hhhh--CHHHHHHHHHHhcccCcEEEEEE
Q 028410 154 TAHL----AEAL--FPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 154 ~~~~----~~~~--~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
++.. ..+. ++..+++++.|+|||||.+++++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 5421 1111 45779999999999999998843
No 133
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.44 E-value=9.1e-13 Score=110.59 Aligned_cols=111 Identities=14% Similarity=0.059 Sum_probs=86.0
Q ss_pred ccCCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCC-------------CCcEEEcCCCCCCCCCCceeeEEcccc
Q 028410 92 SLLFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDS-------------LPLVSRADPHNLPFFDEAFDVAFTAHL 157 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~-------------~~~~~~~d~~~~~~~~~~fD~i~~~~~ 157 (209)
..+.++.+|||||||+|..+..+++ .+..+++++|+++. .+.+..+|+. .+++ +||+|++.++
T Consensus 180 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~v 256 (348)
T 3lst_A 180 GDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRI 256 (348)
T ss_dssp SCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESC
T ss_pred CCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehh
Confidence 3457889999999999999999988 45568999997421 2458889986 3444 8999999999
Q ss_pred hhhh-CH--HHHHHHHHHhcccCcEEEEEEecCC----------------------cccHHHHHHHhcccccc
Q 028410 158 AEAL-FP--SRFVGEMERTVKIGGVCMVLMEECA----------------------GREIKQIVELFRTSSFT 205 (209)
Q Consensus 158 ~~~~-~~--~~~l~~~~r~LkpgG~lil~~~~~~----------------------~~~~~~~~~l~~~~~~~ 205 (209)
.++. ++ .+++++++++|||||++++...... .....++.++++++||.
T Consensus 257 lh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~ 329 (348)
T 3lst_A 257 LHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLR 329 (348)
T ss_dssp GGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCc
Confidence 9888 44 5999999999999999988754221 12455677778877773
No 134
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.44 E-value=3.6e-13 Score=108.44 Aligned_cols=106 Identities=17% Similarity=0.169 Sum_probs=84.7
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC--------------cEEEcCCCCCCCCCCceeeEEcccchh
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP--------------LVSRADPHNLPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~--------------~~~~~d~~~~~~~~~~fD~i~~~~~~~ 159 (209)
+.++.+|||+|||+|..+..+++.+. +|+|+|+++.++ .+..+|+.+. +++++||+|+++...+
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLYAE 195 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECCHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCcHH
Confidence 47889999999999999999999876 999999999854 4566666552 4567899999975444
Q ss_pred hhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccccc
Q 028410 160 ALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSFT 205 (209)
Q Consensus 160 ~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~~ 205 (209)
+ ...++.++.++|||||++++.... ..+...+.+.+.+.||.
T Consensus 196 ~--~~~~l~~~~~~LkpgG~lils~~~--~~~~~~v~~~l~~~Gf~ 237 (254)
T 2nxc_A 196 L--HAALAPRYREALVPGGRALLTGIL--KDRAPLVREAMAGAGFR 237 (254)
T ss_dssp H--HHHHHHHHHHHEEEEEEEEEEEEE--GGGHHHHHHHHHHTTCE
T ss_pred H--HHHHHHHHHHHcCCCCEEEEEeec--cCCHHHHHHHHHHCCCE
Confidence 2 478899999999999998876443 34678888899888873
No 135
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.44 E-value=1.2e-12 Score=109.83 Aligned_cols=92 Identities=16% Similarity=0.113 Sum_probs=76.1
Q ss_pred cCCC-CCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCCC----------------CcEEEcCCCCCC-CCCCceeeEE
Q 028410 93 LLFN-HSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDSL----------------PLVSRADPHNLP-FFDEAFDVAF 153 (209)
Q Consensus 93 ~~~~-~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~-~~~~~fD~i~ 153 (209)
...+ +.+|||+|||+|..+..+++ .+..+++++|+ +.+ +.+..+|+.+.+ +.++.||+|+
T Consensus 175 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~ 253 (352)
T 3mcz_A 175 GVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVM 253 (352)
T ss_dssp GGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEE
T ss_pred CCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEE
Confidence 3455 89999999999999999988 45569999999 542 458899998876 2356799999
Q ss_pred cccchhhhC-H--HHHHHHHHHhcccCcEEEEEEe
Q 028410 154 TAHLAEALF-P--SRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 154 ~~~~~~~~~-~--~~~l~~~~r~LkpgG~lil~~~ 185 (209)
+.++.++.. + ..++++++++|||||++++...
T Consensus 254 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 254 LNDCLHYFDAREAREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 999988873 3 7899999999999999988754
No 136
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.44 E-value=2.6e-13 Score=107.96 Aligned_cols=83 Identities=12% Similarity=0.085 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCcEEEc-----------CCC-----CCC---CCCCceeeEEcc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPLVSRA-----------DPH-----NLP---FFDEAFDVAFTA 155 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~~~~~-----------d~~-----~~~---~~~~~fD~i~~~ 155 (209)
.++.+|||+|||+|.++..+++.|..+|+|+|+|+.|++.... ++. +++ +...+||+++++
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~ 115 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFIS 115 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSC
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhh
Confidence 4567999999999999999999876699999999999873111 111 111 223455555542
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
...++.++.|+|||||.+++.+
T Consensus 116 -------l~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 116 -------LDLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp -------GGGTHHHHHHHSCTTCEEEEEE
T ss_pred -------HHHHHHHHHHhccCCCEEEEEE
Confidence 2778999999999999998874
No 137
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.43 E-value=4.7e-13 Score=106.67 Aligned_cols=105 Identities=10% Similarity=0.016 Sum_probs=77.9
Q ss_pred CCCeEEEEcCCCChhHHHHHhc-----CCceEEEecCCCCCC----------cEEEcCCCCC---CCCC-CceeeEEccc
Q 028410 96 NHSKVLCVSAGAGHEVMAFNSI-----GVADVTGVELMDSLP----------LVSRADPHNL---PFFD-EAFDVAFTAH 156 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~~-----~~~~v~~vD~s~~~~----------~~~~~d~~~~---~~~~-~~fD~i~~~~ 156 (209)
++.+|||+|||+|..+..+++. +.++|+|+|+++.++ .++++|+.+. +..+ .+||+|++..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 4679999999999999999875 346999999999864 4788999884 5434 4799999854
Q ss_pred chhhhCHHHHHHHHHH-hcccCcEEEEEEecC--CcccHHHHHHHhccc
Q 028410 157 LAEALFPSRFVGEMER-TVKIGGVCMVLMEEC--AGREIKQIVELFRTS 202 (209)
Q Consensus 157 ~~~~~~~~~~l~~~~r-~LkpgG~lil~~~~~--~~~~~~~~~~l~~~~ 202 (209)
. |.+...++.++.+ +|||||++++....+ .......+.++++..
T Consensus 161 ~--~~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~ 207 (236)
T 2bm8_A 161 A--HANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAF 207 (236)
T ss_dssp S--CSSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTT
T ss_pred c--hHhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhC
Confidence 3 2477889999997 999999987753211 011223566666655
No 138
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.43 E-value=5.1e-14 Score=109.24 Aligned_cols=107 Identities=14% Similarity=0.137 Sum_probs=71.5
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCCcEEEcC--------------CCCCCCCC-----CceeeEEc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLPLVSRAD--------------PHNLPFFD-----EAFDVAFT 154 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~~~~~~d--------------~~~~~~~~-----~~fD~i~~ 154 (209)
.++.+|||+|||+|..+..+++. +..+++|+|+++.+++..... +.+ ++++ ++||+|++
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIVS 107 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEEE
Confidence 67899999999999999999985 345999999999977643333 222 3444 89999999
Q ss_pred ccch------hhhC---------------------HHHHHHHHHHhcccCcE-EEEEEecCCcccHHHHHHHhc--cccc
Q 028410 155 AHLA------EALF---------------------PSRFVGEMERTVKIGGV-CMVLMEECAGREIKQIVELFR--TSSF 204 (209)
Q Consensus 155 ~~~~------~~~~---------------------~~~~l~~~~r~LkpgG~-lil~~~~~~~~~~~~~~~l~~--~~~~ 204 (209)
+... +++. ...+++++.++|||||. +++.+. ..+...+.+++. ..+|
T Consensus 108 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~~~l~~~~~gf 184 (215)
T 4dzr_A 108 NPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG---HNQADEVARLFAPWRERG 184 (215)
T ss_dssp CCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT---TSCHHHHHHHTGGGGGGT
T ss_pred CCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC---CccHHHHHHHHHHhhcCC
Confidence 5211 1110 16788999999999999 444443 456777888888 7776
Q ss_pred c
Q 028410 205 T 205 (209)
Q Consensus 205 ~ 205 (209)
.
T Consensus 185 ~ 185 (215)
T 4dzr_A 185 F 185 (215)
T ss_dssp E
T ss_pred c
Confidence 3
No 139
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.43 E-value=7.9e-13 Score=111.32 Aligned_cols=89 Identities=16% Similarity=0.100 Sum_probs=75.9
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
...++.+|||+|||+|..+..+++ .+..+++++|+ +.+ +.++.+|+.+.++++. |+|++.
T Consensus 187 ~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~ 263 (359)
T 1x19_A 187 KLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFC 263 (359)
T ss_dssp CCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEE
T ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEe
Confidence 457889999999999999999998 45569999999 663 4578999988877654 999999
Q ss_pred cchhhh-C--HHHHHHHHHHhcccCcEEEEEE
Q 028410 156 HLAEAL-F--PSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 156 ~~~~~~-~--~~~~l~~~~r~LkpgG~lil~~ 184 (209)
++.++. + ..++++++.++|||||++++..
T Consensus 264 ~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 264 RILYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp SCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred chhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 988877 4 5889999999999999998876
No 140
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.43 E-value=5.2e-14 Score=106.64 Aligned_cols=95 Identities=15% Similarity=0.149 Sum_probs=74.1
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC----------------cEEEcCCCC-CCCCCCceeeEEccc
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP----------------LVSRADPHN-LPFFDEAFDVAFTAH 156 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~----------------~~~~~d~~~-~~~~~~~fD~i~~~~ 156 (209)
..++.+|||+|||+|..+..+++.+..+|+|+|+++.++ .++.+|+.+ ++..+++||+|+++.
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 357889999999999999999988667999999998643 466777766 344457799999975
Q ss_pred chhhhCHHHHHHHHH--HhcccCcEEEEEEecCC
Q 028410 157 LAEALFPSRFVGEME--RTVKIGGVCMVLMEECA 188 (209)
Q Consensus 157 ~~~~~~~~~~l~~~~--r~LkpgG~lil~~~~~~ 188 (209)
..+.....+.+..+. ++|||||.+++......
T Consensus 109 ~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 109 PYAKETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp SSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCCcchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 543334567777777 99999999988877643
No 141
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.43 E-value=5.5e-13 Score=106.26 Aligned_cols=108 Identities=12% Similarity=0.234 Sum_probs=78.9
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC---------------------CcEEEcCCCC-CC--CCCCc
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL---------------------PLVSRADPHN-LP--FFDEA 148 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~---------------------~~~~~~d~~~-~~--~~~~~ 148 (209)
..++.+|||||||+|.++..+++. +..+++|+|+|+.+ +.++++|+.+ ++ +++++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 367789999999999999999984 55699999998643 3478899887 66 78899
Q ss_pred eeeEEcccchhhh---------CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccc
Q 028410 149 FDVAFTAHLAEAL---------FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSS 203 (209)
Q Consensus 149 fD~i~~~~~~~~~---------~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~ 203 (209)
||.|+++....+. ....+++++.++|||||.+++.+.. ......+.+.+...+
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~--~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV--LELHDWMCTHFEEHP 185 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC--HHHHHHHHHHHHTST
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC--HHHHHHHHHHHHHCC
Confidence 9999875322211 1147999999999999998877653 234445555555443
No 142
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.42 E-value=6.3e-13 Score=112.25 Aligned_cols=109 Identities=21% Similarity=0.149 Sum_probs=84.2
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCC----------------CCcEEEcCCCCCCCCCCceeeEEccc
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTAH 156 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~i~~~~ 156 (209)
+.++.+|||+|||+|..+..+++. +..+++++|+ +. .+.+..+|+.+ +++. .||+|++.+
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~ 256 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSF 256 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEES
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEec
Confidence 467899999999999999999984 4469999998 54 24588899876 4444 499999999
Q ss_pred chhhh-CH--HHHHHHHHHhcccCcEEEEEEe--cC-C---------------------cccHHHHHHHhcccccc
Q 028410 157 LAEAL-FP--SRFVGEMERTVKIGGVCMVLME--EC-A---------------------GREIKQIVELFRTSSFT 205 (209)
Q Consensus 157 ~~~~~-~~--~~~l~~~~r~LkpgG~lil~~~--~~-~---------------------~~~~~~~~~l~~~~~~~ 205 (209)
+.++. ++ .++++++.++|||||++++... .. + .....++.+++.++||.
T Consensus 257 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~ 332 (374)
T 1qzz_A 257 VLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLA 332 (374)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEE
T ss_pred cccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCc
Confidence 88887 44 4899999999999999888765 21 1 12556677788888873
No 143
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.42 E-value=6e-13 Score=112.36 Aligned_cols=89 Identities=12% Similarity=0.167 Sum_probs=74.2
Q ss_pred CCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCC----------------CCcEEEcCCCCC--CCCCCceeeEEcc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDS----------------LPLVSRADPHNL--PFFDEAFDVAFTA 155 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~----------------~~~~~~~d~~~~--~~~~~~fD~i~~~ 155 (209)
.+..+|||||||+|..+..+++ .+..+++++|+ +. .+.++.+|+.+. |++ ++||+|++.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 4678999999999999999988 45569999998 54 245889999886 565 789999999
Q ss_pred cchhhh-CH--HHHHHHHHHhcccCcEEEEEEe
Q 028410 156 HLAEAL-FP--SRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 156 ~~~~~~-~~--~~~l~~~~r~LkpgG~lil~~~ 185 (209)
++.++. ++ .+++++++++|||||++++...
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEee
Confidence 988876 33 5789999999999999988653
No 144
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.42 E-value=7.2e-13 Score=112.17 Aligned_cols=87 Identities=11% Similarity=0.093 Sum_probs=73.6
Q ss_pred CCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCC---------CCcEEEcCCCCCCCCCCceeeEEcccchhhh-C
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDS---------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL-F 162 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~---------~~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~ 162 (209)
+.++.+|||+|||+|..+..+++ .+..+++++|+ +. .+.++.+|+.+ ++++ ||+|++.++.++. +
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d 282 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPLSGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWSD 282 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTT-CCCC--EEEEEEESSGGGSCH
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhcCCCEEEeCCccc-CCCC--CCEEEEecccccCCH
Confidence 56789999999999999999998 44568999997 43 24588899987 6654 9999999998888 5
Q ss_pred HH--HHHHHHHHhcccCcEEEEEE
Q 028410 163 PS--RFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 163 ~~--~~l~~~~r~LkpgG~lil~~ 184 (209)
+. .++++++++|||||++++..
T Consensus 283 ~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 283 EKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 55 89999999999999998874
No 145
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.42 E-value=6.1e-13 Score=106.41 Aligned_cols=107 Identities=13% Similarity=0.102 Sum_probs=87.2
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCC----------------CCcEEEcCCCCCCCCCCceeeEEc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFT 154 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~i~~ 154 (209)
.+.++.+|||+|||+|..+..+++. + ..+++++|+++. .+.+..+|+.+.++++++||+|++
T Consensus 93 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~ 172 (258)
T 2pwy_A 93 DLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVAL 172 (258)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEE
Confidence 5688999999999999999999985 3 469999999874 345788898888788889999998
Q ss_pred ccchhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccccc
Q 028410 155 AHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSFT 205 (209)
Q Consensus 155 ~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~~ 205 (209)
+. .++..++.++.++|||||.+++.... ..+...+.+.++..+|.
T Consensus 173 ~~----~~~~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 173 DL----MEPWKVLEKAALALKPDRFLVAYLPN--ITQVLELVRAAEAHPFR 217 (258)
T ss_dssp ES----SCGGGGHHHHHHHEEEEEEEEEEESC--HHHHHHHHHHHTTTTEE
T ss_pred CC----cCHHHHHHHHHHhCCCCCEEEEEeCC--HHHHHHHHHHHHHCCCc
Confidence 31 25678999999999999998877654 34667777888877774
No 146
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.41 E-value=9.9e-14 Score=113.33 Aligned_cols=134 Identities=16% Similarity=0.153 Sum_probs=84.6
Q ss_pred hccCchhHhhHhHHHHHHHHHHHhcccCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecC-CCCCCc------------
Q 028410 67 RLWSSKSWKQQVTSYAHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVEL-MDSLPL------------ 133 (209)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~-s~~~~~------------ 133 (209)
..|....|.........+.. .....++.+|||+|||+|..+..+++.+..+|+++|+ ++.+++
T Consensus 54 ~~~g~~~~~~~~~l~~~l~~----~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~ 129 (281)
T 3bzb_A 54 PLWTSHVWSGARALADTLCW----QPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTAN 129 (281)
T ss_dssp --------CHHHHHHHHHHH----CGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC-
T ss_pred CCCCceeecHHHHHHHHHHh----cchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhh
Confidence 56666666433332222222 2233577899999999999999999887669999999 665432
Q ss_pred -------------EEEcCCCCCC--C----CCCceeeEEcccchhhh-CHHHHHHHHHHhcc---c--CcEEEEEEecCC
Q 028410 134 -------------VSRADPHNLP--F----FDEAFDVAFTAHLAEAL-FPSRFVGEMERTVK---I--GGVCMVLMEECA 188 (209)
Q Consensus 134 -------------~~~~d~~~~~--~----~~~~fD~i~~~~~~~~~-~~~~~l~~~~r~Lk---p--gG~lil~~~~~~ 188 (209)
+...+..+.. + ++++||+|++.++.++. +...+++++.++|| | ||.+++++....
T Consensus 130 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~ 209 (281)
T 3bzb_A 130 SCSSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHR 209 (281)
T ss_dssp ---------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--
T ss_pred hcccccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeee
Confidence 2222222211 1 35789999998877766 78999999999999 9 999887765532
Q ss_pred c---ccHHHHHHHhcccc-c
Q 028410 189 G---REIKQIVELFRTSS-F 204 (209)
Q Consensus 189 ~---~~~~~~~~l~~~~~-~ 204 (209)
. .....+.+.++..| |
T Consensus 210 ~~~~~~~~~~~~~l~~~G~f 229 (281)
T 3bzb_A 210 PHLAERDLAFFRLVNADGAL 229 (281)
T ss_dssp ------CTHHHHHHHHSTTE
T ss_pred cccchhHHHHHHHHHhcCCE
Confidence 1 22445666677766 5
No 147
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.41 E-value=4.1e-13 Score=109.10 Aligned_cols=107 Identities=20% Similarity=0.185 Sum_probs=84.8
Q ss_pred cccCCCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCC----------------CCcEEEcCCCCCCCCCCceeeE
Q 028410 91 KSLLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVA 152 (209)
Q Consensus 91 ~~~~~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~i 152 (209)
...+.++.+|||+|||+|..+..+++. +..+|+++|+++. .+.+..+|+.+ ++++++||+|
T Consensus 105 ~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~V 183 (275)
T 1yb2_A 105 RCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAV 183 (275)
T ss_dssp -CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEE
T ss_pred HcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEE
Confidence 335688899999999999999999985 3469999999874 24577888877 5677899999
Q ss_pred EcccchhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 153 FTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
+++ . .++..+++++.++|||||.+++.+.. ..+...+.+.+...+|
T Consensus 184 i~~-~---~~~~~~l~~~~~~LkpgG~l~i~~~~--~~~~~~~~~~l~~~Gf 229 (275)
T 1yb2_A 184 IAD-I---PDPWNHVQKIASMMKPGSVATFYLPN--FDQSEKTVLSLSASGM 229 (275)
T ss_dssp EEC-C---SCGGGSHHHHHHTEEEEEEEEEEESS--HHHHHHHHHHSGGGTE
T ss_pred EEc-C---cCHHHHHHHHHHHcCCCCEEEEEeCC--HHHHHHHHHHHHHCCC
Confidence 982 1 25788999999999999998887754 3456677788887776
No 148
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.41 E-value=3e-13 Score=108.26 Aligned_cols=105 Identities=16% Similarity=0.206 Sum_probs=84.5
Q ss_pred ccCCCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEE
Q 028410 92 SLLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAF 153 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~ 153 (209)
....++.+|||+|||+|..+..+++. + ..+++++|+++.+ +.+..+|+.+. +++++||+|+
T Consensus 89 ~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~ 167 (255)
T 3mb5_A 89 AGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVI 167 (255)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEE
T ss_pred hCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEE
Confidence 35688999999999999999999985 3 5799999999762 45778888754 6788999999
Q ss_pred cccchhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccc
Q 028410 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSS 203 (209)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~ 203 (209)
++. .++..+++++.++|||||.+++.... ..+...+.+.++..+
T Consensus 168 ~~~----~~~~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 168 LDL----PQPERVVEHAAKALKPGGFFVAYTPC--SNQVMRLHEKLREFK 211 (255)
T ss_dssp ECS----SCGGGGHHHHHHHEEEEEEEEEEESS--HHHHHHHHHHHHHTG
T ss_pred ECC----CCHHHHHHHHHHHcCCCCEEEEEECC--HHHHHHHHHHHHHcC
Confidence 831 25678899999999999998776543 456777888888877
No 149
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.41 E-value=6.1e-13 Score=108.09 Aligned_cols=107 Identities=11% Similarity=0.156 Sum_probs=82.7
Q ss_pred CCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCCC---------------CcEEEcCCCCCCCCCCceeeEEccc--
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAFTAH-- 156 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~i~~~~-- 156 (209)
.++.+|||+|||+|..+..+++ .+..+|+++|+|+.+ +.++++|+.+. +++++||+|+++.
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-~~~~~fD~Iv~npPy 186 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-LAGQQFAMIVSNPPY 186 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-GTTCCEEEEEECCCC
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-cccCCccEEEECCCC
Confidence 5678999999999999999997 555699999999874 34777887763 4467999999972
Q ss_pred -----------chhh------------h-CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccccc
Q 028410 157 -----------LAEA------------L-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSFT 205 (209)
Q Consensus 157 -----------~~~~------------~-~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~~ 205 (209)
+.++ + +...++.++.++|||||.+++... ..+...+.+++++.||.
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~---~~~~~~~~~~l~~~Gf~ 256 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG---WQQGEAVRQAFILAGYH 256 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC---SSCHHHHHHHHHHTTCT
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC---chHHHHHHHHHHHCCCc
Confidence 1111 1 347788999999999999887654 45677788888888773
No 150
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.40 E-value=1.6e-13 Score=106.72 Aligned_cols=92 Identities=15% Similarity=0.051 Sum_probs=73.4
Q ss_pred CCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC---------------cEEEcCCCC-CCCCCCceeeEEcccchh
Q 028410 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP---------------LVSRADPHN-LPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~---------------~~~~~d~~~-~~~~~~~fD~i~~~~~~~ 159 (209)
++.+|||+|||+|..+..++..+..+|+++|+|+.++ .++++|+.+ ++..+++||+|+++..++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 5789999999999999988776656999999998744 467778766 455678999999975533
Q ss_pred hhCHHHHHHHHHH--hcccCcEEEEEEecC
Q 028410 160 ALFPSRFVGEMER--TVKIGGVCMVLMEEC 187 (209)
Q Consensus 160 ~~~~~~~l~~~~r--~LkpgG~lil~~~~~ 187 (209)
..+...+++++.+ +|||||.+++.....
T Consensus 134 ~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 134 RGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred CCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 3367788888876 599999998887654
No 151
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.40 E-value=1e-13 Score=105.49 Aligned_cols=94 Identities=14% Similarity=0.058 Sum_probs=74.8
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCC----CCCCCceeeEEc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNL----PFFDEAFDVAFT 154 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~----~~~~~~fD~i~~ 154 (209)
.++.+|||+|||+|..+..+++.+..+|+|+|+++.+ +.++++|+.+. ++++++||+|++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 5788999999999999999888766799999999864 34777887662 223689999999
Q ss_pred ccchhhhCHHHHHHHH--HHhcccCcEEEEEEecCC
Q 028410 155 AHLAEALFPSRFVGEM--ERTVKIGGVCMVLMEECA 188 (209)
Q Consensus 155 ~~~~~~~~~~~~l~~~--~r~LkpgG~lil~~~~~~ 188 (209)
+...+..+....+..+ .++|||||.+++......
T Consensus 123 ~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 123 DPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp CCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 7664434677788888 889999999988877643
No 152
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.40 E-value=2e-12 Score=106.86 Aligned_cols=92 Identities=15% Similarity=0.079 Sum_probs=68.7
Q ss_pred ccCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecC----CCCC-------------CcEEEc-CCCCCCCCCCceeeEE
Q 028410 92 SLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVEL----MDSL-------------PLVSRA-DPHNLPFFDEAFDVAF 153 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~----s~~~-------------~~~~~~-d~~~~~~~~~~fD~i~ 153 (209)
..++++.+|||+|||+|.++..+++. ++|+|+|+ ++.+ +.++++ |+.+++ +++||+|+
T Consensus 78 ~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~ 153 (305)
T 2p41_A 78 NLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLL 153 (305)
T ss_dssp TSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEE
T ss_pred CCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEE
Confidence 45678899999999999999999988 58999998 4422 225566 666654 57999999
Q ss_pred cccch---hhh-CHH---HHHHHHHHhcccCcEEEEEEecC
Q 028410 154 TAHLA---EAL-FPS---RFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 154 ~~~~~---~~~-~~~---~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
|.... ++. +.. .++.++.++|||||.+++.+...
T Consensus 154 sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 154 CDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp ECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred ECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 96432 122 222 57899999999999988765544
No 153
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.40 E-value=4.5e-13 Score=109.14 Aligned_cols=91 Identities=13% Similarity=0.145 Sum_probs=70.9
Q ss_pred CCCeEEEEcCCCCh----hHHHHHhc-C----CceEEEecCCCCCC----------------------------------
Q 028410 96 NHSKVLCVSAGAGH----EVMAFNSI-G----VADVTGVELMDSLP---------------------------------- 132 (209)
Q Consensus 96 ~~~~iLDiGcG~G~----~~~~la~~-~----~~~v~~vD~s~~~~---------------------------------- 132 (209)
++.+|||+|||||. .+..+++. + ..+|+|+|+|+.++
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 46899999999998 45555553 3 24899999987633
Q ss_pred ------------cEEEcCCCCCCCC-CCceeeEEcccchhhhCH---HHHHHHHHHhcccCcEEEEEEec
Q 028410 133 ------------LVSRADPHNLPFF-DEAFDVAFTAHLAEALFP---SRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 133 ------------~~~~~d~~~~~~~-~~~fD~i~~~~~~~~~~~---~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
.|.++|+.+.|++ .++||+|+|.++..++++ .++++++++.|||||++++...+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE 254 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSE 254 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTTC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 3556677776665 578999999999888854 68999999999999998775444
No 154
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.39 E-value=3.8e-12 Score=107.70 Aligned_cols=88 Identities=10% Similarity=0.049 Sum_probs=73.4
Q ss_pred CCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCC---------CCcEEEcCCCCCCCCCCceeeEEcccchhhhC-
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDS---------LPLVSRADPHNLPFFDEAFDVAFTAHLAEALF- 162 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~---------~~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~- 162 (209)
+.+..+|||||||+|..+..+++ .+..+++++|+ +. .++++.+|+.+ +++++ |+|++.++.|+..
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~ 276 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAFSGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSD 276 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEESCGGGBCH
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhcCCCEEEecCCCC-CCCCC--CEEEEechhhcCCH
Confidence 56789999999999999999988 56668999998 43 34588999987 67654 9999999888773
Q ss_pred H--HHHHHHHHHhcccCcEEEEEEe
Q 028410 163 P--SRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 163 ~--~~~l~~~~r~LkpgG~lil~~~ 185 (209)
. .+++++++++|||||++++...
T Consensus 277 ~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 277 EHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 3 5789999999999999988754
No 155
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.39 E-value=9.1e-13 Score=120.11 Aligned_cols=90 Identities=10% Similarity=0.072 Sum_probs=77.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcC--CceEEEecCCCCC---------------------CcEEEcCCCCCCCCCCceee
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIG--VADVTGVELMDSL---------------------PLVSRADPHNLPFFDEAFDV 151 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~--~~~v~~vD~s~~~---------------------~~~~~~d~~~~~~~~~~fD~ 151 (209)
.++.+|||+|||+|..+..+++.+ ..+|+|+|+|+.+ +.++++|+.++++++++||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 478999999999999999999964 2599999999863 34789999999999999999
Q ss_pred EEcccchhhhC-H--HHHHHHHHHhcccCcEEEEEEe
Q 028410 152 AFTAHLAEALF-P--SRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 152 i~~~~~~~~~~-~--~~~l~~~~r~LkpgG~lil~~~ 185 (209)
|++..+.+|+. + ..+++++.++|||| .+++.+.
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 99999999994 3 35899999999999 6666654
No 156
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.39 E-value=8.7e-13 Score=103.99 Aligned_cols=89 Identities=19% Similarity=0.154 Sum_probs=73.3
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC-------------CcEEEcCCCCCCCCCCceeeEEcccchh
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-------------PLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~-------------~~~~~~d~~~~~~~~~~fD~i~~~~~~~ 159 (209)
...++.+|||+|||+|..+..+++.+ .+|+++|+++.+ +.++.+|+.+...++++||+|++....+
T Consensus 67 ~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 67 DLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAP 145 (231)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBS
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcHH
Confidence 45788999999999999999999976 699999999863 4577888877333468999999987777
Q ss_pred hhCHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 160 ALFPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 160 ~~~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
++. .++.++|||||.+++.+...
T Consensus 146 ~~~-----~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 146 TLL-----CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp SCC-----HHHHHTEEEEEEEEEEECSS
T ss_pred HHH-----HHHHHHcCCCcEEEEEEcCC
Confidence 663 36899999999999987654
No 157
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.38 E-value=3e-13 Score=105.06 Aligned_cols=93 Identities=19% Similarity=0.120 Sum_probs=71.5
Q ss_pred CCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC-----------------cEEEcCCCCCC--CCCCc-eeeEEcc
Q 028410 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP-----------------LVSRADPHNLP--FFDEA-FDVAFTA 155 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~-----------------~~~~~d~~~~~--~~~~~-fD~i~~~ 155 (209)
++.+|||+|||+|..+..++..+..+|+|+|+|+.++ +++++|+.+.. +++++ ||+|+++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 6789999999999999987776667999999997633 46677766532 23678 9999997
Q ss_pred cchhhhCHHHHHHHH--HHhcccCcEEEEEEecCC
Q 028410 156 HLAEALFPSRFVGEM--ERTVKIGGVCMVLMEECA 188 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~--~r~LkpgG~lil~~~~~~ 188 (209)
...+.-+...++.++ .++|||||.+++......
T Consensus 133 ~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 133 PPFHFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCCCCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 553322567888888 668999999988876543
No 158
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.37 E-value=4.4e-12 Score=106.57 Aligned_cols=91 Identities=18% Similarity=0.126 Sum_probs=73.4
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
...++.+|||+|||+|..+..+++. +..+++++|+ +.+ +.++.+|+.+ +++. .||+|++.
T Consensus 180 ~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~ 256 (360)
T 1tw3_A 180 DWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILS 256 (360)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEE
T ss_pred CCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEc
Confidence 3467889999999999999999884 4458999998 652 4578888876 3444 49999999
Q ss_pred cchhhh-CH--HHHHHHHHHhcccCcEEEEEEec
Q 028410 156 HLAEAL-FP--SRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 156 ~~~~~~-~~--~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
++.++. ++ .++++++.++|||||++++....
T Consensus 257 ~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 257 FVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 988877 33 48999999999999999887543
No 159
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.37 E-value=1.6e-12 Score=109.21 Aligned_cols=88 Identities=9% Similarity=0.060 Sum_probs=73.8
Q ss_pred CCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCCC---------CcEEEcCCCCCCCCCCceeeEEcccchhhh-C
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDSL---------PLVSRADPHNLPFFDEAFDVAFTAHLAEAL-F 162 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~~---------~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~ 162 (209)
+.+..+|||+|||+|..+..+++ .+..+++++|+ +.+ +.+..+|+.+ ++++ ||+|++.++.++. +
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d 261 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGSNNLTYVGGDMFT-SIPN--ADAVLLKYILHNWTD 261 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCBTTEEEEECCTTT-CCCC--CSEEEEESCGGGSCH
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccCCCcEEEeccccC-CCCC--ccEEEeehhhccCCH
Confidence 46779999999999999999998 45569999998 543 4578899876 5553 9999999998888 5
Q ss_pred HH--HHHHHHHHhccc---CcEEEEEEe
Q 028410 163 PS--RFVGEMERTVKI---GGVCMVLME 185 (209)
Q Consensus 163 ~~--~~l~~~~r~Lkp---gG~lil~~~ 185 (209)
+. +++++++++||| ||++++...
T Consensus 262 ~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 262 KDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp HHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 55 899999999999 999988754
No 160
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.37 E-value=3e-12 Score=103.32 Aligned_cols=105 Identities=19% Similarity=0.145 Sum_probs=81.5
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC-------------------CcEEEcCCCCC-------CCCC
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL-------------------PLVSRADPHNL-------PFFD 146 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~-------------------~~~~~~d~~~~-------~~~~ 146 (209)
..++.+|||+|||+|..+..+++. +..+|+++|+++.+ +.++++|+.+. ++++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 467889999999999999999985 44699999998751 45789999887 3667
Q ss_pred CceeeEEcccchh----------------h--h-CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcc
Q 028410 147 EAFDVAFTAHLAE----------------A--L-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRT 201 (209)
Q Consensus 147 ~~fD~i~~~~~~~----------------~--~-~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~ 201 (209)
++||+|+++.-.. + . ....+++++.++|||||.++++... .....+.+.+++
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~~l~~ 184 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP---QSVAEIIAACGS 184 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG---GGHHHHHHHHTT
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH---HHHHHHHHHHHh
Confidence 8999999972111 1 1 3678999999999999999887764 356667776665
No 161
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.36 E-value=2.1e-13 Score=121.71 Aligned_cols=92 Identities=12% Similarity=0.108 Sum_probs=75.3
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC---------------cEEEcCCCCC--CCCCCceeeEEcccc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP---------------LVSRADPHNL--PFFDEAFDVAFTAHL 157 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~---------------~~~~~d~~~~--~~~~~~fD~i~~~~~ 157 (209)
..+.+|||||||.|.++..||+.|. +|+|||+++.++ ++.+++++++ ++++++||+|+|..+
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 5678999999999999999999986 999999998744 3677888776 466789999999999
Q ss_pred hhhh-CHHH--HHHHHHHhcccCcEEEEEEecC
Q 028410 158 AEAL-FPSR--FVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 158 ~~~~-~~~~--~l~~~~r~LkpgG~lil~~~~~ 187 (209)
.+|+ ++.. .+..+.+.|+++|..++..-..
T Consensus 144 ~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 144 FHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred hhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 9999 6643 3456788899988877665443
No 162
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.36 E-value=6e-13 Score=111.59 Aligned_cols=107 Identities=18% Similarity=0.149 Sum_probs=82.0
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC--------------cEEEcCCCCCCCCCCceeeEEcccchh
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP--------------LVSRADPHNLPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~--------------~~~~~d~~~~~~~~~~fD~i~~~~~~~ 159 (209)
.++.+|||+|||+|..+..+++. +..+|+++|+|+.++ .+..+|+.+.+ +++||+|+++..++
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~--~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV--KGRFDMIISNPPFH 272 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC--CSCEEEEEECCCCC
T ss_pred CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc--cCCeeEEEECCCcc
Confidence 45779999999999999999985 345999999998744 36677776643 78999999986554
Q ss_pred h-----h-CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 160 A-----L-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 160 ~-----~-~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
+ . +...+++++.++|||||.++++...... ....+...|+.+..
T Consensus 273 ~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~-~~~~l~~~f~~~~~ 322 (343)
T 2pjd_A 273 DGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLP-YPDVLDETFGFHEV 322 (343)
T ss_dssp SSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSS-HHHHHHHHHSCCEE
T ss_pred cCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCC-cHHHHHHhcCceEE
Confidence 3 2 5689999999999999999988776432 23455666665543
No 163
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.35 E-value=3.4e-12 Score=108.20 Aligned_cols=87 Identities=21% Similarity=0.194 Sum_probs=71.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCC---------------CCcEEEcCCCCCCCCCCceeeEEcccchh
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~i~~~~~~~ 159 (209)
-++.+|||||||+|.++...++.|..+|+|+|.|+. .+.++.+|++++.++ ++||+|++..+..
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGY 160 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBT
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccc
Confidence 467899999999999999888888889999999863 234889999998876 6899999953322
Q ss_pred hh----CHHHHHHHHHHhcccCcEEEE
Q 028410 160 AL----FPSRFVGEMERTVKIGGVCMV 182 (209)
Q Consensus 160 ~~----~~~~~l~~~~r~LkpgG~lil 182 (209)
.+ ....++....|.|||||.++-
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccchhhhHHHHHHhhCCCCceECC
Confidence 22 568888888999999998753
No 164
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.35 E-value=3.6e-12 Score=103.30 Aligned_cols=106 Identities=23% Similarity=0.275 Sum_probs=83.2
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCC------------------CCcEEEcCCCCCCCCCCceeeE
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS------------------LPLVSRADPHNLPFFDEAFDVA 152 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~------------------~~~~~~~d~~~~~~~~~~fD~i 152 (209)
.+.++.+|||+|||+|..+..+++. +..+++++|+++. .+.+..+|+.+.++++++||+|
T Consensus 96 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v 175 (280)
T 1i9g_A 96 DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRA 175 (280)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEE
T ss_pred CCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEE
Confidence 5688999999999999999999983 3569999999864 2457788888888878899999
Q ss_pred EcccchhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcc-ccc
Q 028410 153 FTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRT-SSF 204 (209)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~-~~~ 204 (209)
+++. .++..++.++.++|||||.+++.+.. ..+...+.+.++. .+|
T Consensus 176 ~~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~--~~~~~~~~~~l~~~~~f 222 (280)
T 1i9g_A 176 VLDM----LAPWEVLDAVSRLLVAGGVLMVYVAT--VTQLSRIVEALRAKQCW 222 (280)
T ss_dssp EEES----SCGGGGHHHHHHHEEEEEEEEEEESS--HHHHHHHHHHHHHHSSB
T ss_pred EECC----cCHHHHHHHHHHhCCCCCEEEEEeCC--HHHHHHHHHHHHhcCCc
Confidence 9832 25778999999999999998887654 3455556665554 444
No 165
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.35 E-value=2e-13 Score=104.80 Aligned_cols=89 Identities=8% Similarity=0.007 Sum_probs=71.9
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCCc--------------EEEcCCCCCCCCCCceeeEEcccchh
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLPL--------------VSRADPHNLPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~~--------------~~~~d~~~~~~~~~~fD~i~~~~~~~ 159 (209)
.+..+|||+|||+|.++..++.. +..+|+++|+|+.|++ +...|.... .+.++||+|+...+.|
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~LH 126 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKMLP 126 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCHH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhHHH
Confidence 77999999999999999999874 5569999999999775 233444333 4578999999999999
Q ss_pred hh-CHHHHHHHHHHhcccCcEEEEEEe
Q 028410 160 AL-FPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 160 ~~-~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
++ +.+..+.++.+.|||||.+ +.+.
T Consensus 127 lL~~~~~al~~v~~~L~pggvf-ISfp 152 (200)
T 3fzg_A 127 VLKQQDVNILDFLQLFHTQNFV-ISFP 152 (200)
T ss_dssp HHHHTTCCHHHHHHTCEEEEEE-EEEE
T ss_pred hhhhhHHHHHHHHHHhCCCCEE-EEeC
Confidence 99 5567788999999999985 4444
No 166
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.34 E-value=1.3e-12 Score=101.97 Aligned_cols=90 Identities=20% Similarity=0.127 Sum_probs=71.5
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcC--CceEEEecCCCCC---------------CcEEEcCCCCCCCCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIG--VADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~--~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
...++.+|||+|||+|..+..+++.. ..+|+++|+++.+ +.+..+|+......+++||+|++.
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 153 (215)
T 2yxe_A 74 DLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTT 153 (215)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEES
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEEC
Confidence 45788999999999999999999852 2599999999763 346777775432236789999998
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
...+++. .++.+.|||||.+++.+...
T Consensus 154 ~~~~~~~-----~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 154 AAGPKIP-----EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp SBBSSCC-----HHHHHTEEEEEEEEEEESSS
T ss_pred CchHHHH-----HHHHHHcCCCcEEEEEECCC
Confidence 7776653 48899999999999988754
No 167
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.34 E-value=5.1e-13 Score=110.36 Aligned_cols=110 Identities=20% Similarity=0.248 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC-------------------CcEEEcCCCCCCC--CCCceeeE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL-------------------PLVSRADPHNLPF--FDEAFDVA 152 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~-------------------~~~~~~d~~~~~~--~~~~fD~i 152 (209)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+ +.++.+|+.+.+. ++++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 56789999999999999999985 55799999999763 3466777666443 47899999
Q ss_pred Ecccchhhh-----CHHHHHHHHHHhcccCcEEEEEEecC--CcccHHHHHHHhccccc
Q 028410 153 FTAHLAEAL-----FPSRFVGEMERTVKIGGVCMVLMEEC--AGREIKQIVELFRTSSF 204 (209)
Q Consensus 153 ~~~~~~~~~-----~~~~~l~~~~r~LkpgG~lil~~~~~--~~~~~~~~~~l~~~~~~ 204 (209)
+++...... ...++++++.++|||||.+++..... .......+.+.+++.||
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF 232 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGF 232 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTC
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCC
Confidence 996443322 12689999999999999988876543 22355666677776666
No 168
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.33 E-value=1.7e-12 Score=107.73 Aligned_cols=90 Identities=19% Similarity=0.144 Sum_probs=73.4
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCCC---------------CcEEEcCCCCCCCCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
.++++.+|||+|||+|..+..+++. + .++|+|+|+|+.+ +.+..+|+.+.+.++++||+|++.
T Consensus 72 ~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~ 151 (317)
T 1dl5_A 72 GLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVT 151 (317)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred CCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEc
Confidence 5678999999999999999999985 3 2579999999863 457788888765567899999998
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
...+++. .++.+.|||||++++.+...
T Consensus 152 ~~~~~~~-----~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 152 VGVDEVP-----ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp SBBSCCC-----HHHHHHEEEEEEEEEEBCBG
T ss_pred CCHHHHH-----HHHHHhcCCCcEEEEEECCC
Confidence 7776664 57889999999998886543
No 169
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.33 E-value=5.1e-12 Score=100.94 Aligned_cols=108 Identities=15% Similarity=0.210 Sum_probs=78.1
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCC-----------------------CCcEEEcCCCC-CC--CCC
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-----------------------LPLVSRADPHN-LP--FFD 146 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~-----------------------~~~~~~~d~~~-~~--~~~ 146 (209)
+.++.+|||+|||+|.++..+++. +..+|+|+|+|+. .+.++.+|+.+ ++ +++
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 367889999999999999999985 4458999999864 24578899887 55 778
Q ss_pred CceeeEEcccchhhh---------CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccc
Q 028410 147 EAFDVAFTAHLAEAL---------FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSS 203 (209)
Q Consensus 147 ~~fD~i~~~~~~~~~---------~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~ 203 (209)
+++|.|+...-..+. ....++.++.++|||||.+++.+.. ......+.+.+...+
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~--~~~~~~~~~~~~~~~ 190 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV--KDLHEWMVKHLEEHP 190 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC--HHHHHHHHHHHHHST
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc--HHHHHHHHHHHHhCc
Confidence 899999864211111 0158999999999999998886543 233344555554443
No 170
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.32 E-value=6.9e-12 Score=103.12 Aligned_cols=93 Identities=22% Similarity=0.265 Sum_probs=70.5
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC--------------------CcEEEcCCCCC-CCCCCceeeE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL--------------------PLVSRADPHNL-PFFDEAFDVA 152 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~--------------------~~~~~~d~~~~-~~~~~~fD~i 152 (209)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+ ++++.+|..+. +..+++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 56789999999999999999985 56799999999863 34667777663 3456899999
Q ss_pred Ecccchhhh-----CHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 153 FTAHLAEAL-----FPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 153 ~~~~~~~~~-----~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
++....... ...++++++.++|||||.+++.....
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~ 201 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEEEC
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCc
Confidence 995332211 22789999999999999988876543
No 171
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.32 E-value=6.8e-12 Score=98.73 Aligned_cols=92 Identities=17% Similarity=0.199 Sum_probs=71.7
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCC-------------CCcEEEcCCCCCC---CCCCceeeEEc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS-------------LPLVSRADPHNLP---FFDEAFDVAFT 154 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~-------------~~~~~~~d~~~~~---~~~~~fD~i~~ 154 (209)
.+.++.+|||+|||+|..+..+++. | .++|+|+|+++. .+.++.+|+.+.. ..+++||+|++
T Consensus 70 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEE
Confidence 3578899999999999999999984 3 469999999994 3457889988732 12468999998
Q ss_pred ccchhhhCH-HHHHHHHHHhcccCcEEEEEEec
Q 028410 155 AHLAEALFP-SRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 155 ~~~~~~~~~-~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
... ..+. ..++.++.++|||||.+++.+..
T Consensus 150 ~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 180 (227)
T 1g8a_A 150 DVA--QPTQAKILIDNAEVYLKRGGYGMIAVKS 180 (227)
T ss_dssp CCC--STTHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CCC--CHhHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 543 2233 45599999999999999888543
No 172
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.32 E-value=1.7e-12 Score=105.52 Aligned_cols=106 Identities=13% Similarity=0.197 Sum_probs=83.6
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFT 154 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~ 154 (209)
.+.++.+|||+|||+|..+..+++. + ..+++++|+++.+ +.+..+|+.+. +++++||+|++
T Consensus 109 ~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~ 187 (277)
T 1o54_A 109 DVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFL 187 (277)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEE
Confidence 5678899999999999999999985 3 5699999998863 34677777766 66789999998
Q ss_pred ccchhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccccc
Q 028410 155 AHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSFT 205 (209)
Q Consensus 155 ~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~~ 205 (209)
+. .++..++.++.++|||||.+++.... ..+...+.+.++..+|.
T Consensus 188 ~~----~~~~~~l~~~~~~L~pgG~l~~~~~~--~~~~~~~~~~l~~~gf~ 232 (277)
T 1o54_A 188 DV----PDPWNYIDKCWEALKGGGRFATVCPT--TNQVQETLKKLQELPFI 232 (277)
T ss_dssp CC----SCGGGTHHHHHHHEEEEEEEEEEESS--HHHHHHHHHHHHHSSEE
T ss_pred CC----cCHHHHHHHHHHHcCCCCEEEEEeCC--HHHHHHHHHHHHHCCCc
Confidence 32 25678899999999999998777654 34566777777777763
No 173
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.32 E-value=4.4e-12 Score=100.76 Aligned_cols=103 Identities=15% Similarity=0.240 Sum_probs=81.4
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTAH 156 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~~~ 156 (209)
.+.++.+|||+|||+|..+..+++. ..+++++|+++.+ +.+..+|+.+..+++++||+|+++.
T Consensus 88 ~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 166 (248)
T 2yvl_A 88 NLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV 166 (248)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECS
T ss_pred CCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECC
Confidence 5578899999999999999999987 4699999999763 3467788877543677899999831
Q ss_pred chhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccc
Q 028410 157 LAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (209)
Q Consensus 157 ~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~ 202 (209)
.++..+++++.++|||||.+++.... ..+...+.+.++..
T Consensus 167 ----~~~~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~l~~~ 206 (248)
T 2yvl_A 167 ----REPWHYLEKVHKSLMEGAPVGFLLPT--ANQVIKLLESIENY 206 (248)
T ss_dssp ----SCGGGGHHHHHHHBCTTCEEEEEESS--HHHHHHHHHHSTTT
T ss_pred ----cCHHHHHHHHHHHcCCCCEEEEEeCC--HHHHHHHHHHHHhh
Confidence 15678899999999999998887764 34566677776655
No 174
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.32 E-value=4.1e-12 Score=111.06 Aligned_cols=91 Identities=16% Similarity=0.130 Sum_probs=74.0
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCC---------------CCCcEEEcCCCCCCCCCCceeeEEcccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMD---------------SLPLVSRADPHNLPFFDEAFDVAFTAHL 157 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~---------------~~~~~~~~d~~~~~~~~~~fD~i~~~~~ 157 (209)
...++.+|||+|||+|..+..+++.|..+|+|+|+|+ ..+.++.+|+.+++++ ++||+|+++.+
T Consensus 155 ~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~ 233 (480)
T 3b3j_A 155 TDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPM 233 (480)
T ss_dssp GGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCC
T ss_pred hhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCc
Confidence 3457889999999999999999988767999999997 1245889999988765 58999999876
Q ss_pred hhhh-C--HHHHHHHHHHhcccCcEEEEEE
Q 028410 158 AEAL-F--PSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 158 ~~~~-~--~~~~l~~~~r~LkpgG~lil~~ 184 (209)
.++. + ....+.++.+.|||||.+++..
T Consensus 234 ~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 234 GYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp HHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred hHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 5555 2 3667778899999999987544
No 175
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.31 E-value=1.1e-11 Score=104.74 Aligned_cols=88 Identities=10% Similarity=0.057 Sum_probs=74.0
Q ss_pred CCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCC---------CCcEEEcCCCCCCCCCCceeeEEcccchhhhC-
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDS---------LPLVSRADPHNLPFFDEAFDVAFTAHLAEALF- 162 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~---------~~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~- 162 (209)
+.+..+|||||||+|..+..+++ .+..+++++|+ +. .+.++.+|+.+ +++++ |+|++.++.|+..
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d 274 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQFPGVTHVGGDMFK-EVPSG--DTILMKWILHDWSD 274 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEESCGGGSCH
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhcCCeEEEeCCcCC-CCCCC--CEEEehHHhccCCH
Confidence 56789999999999999999988 56668999998 43 34588999988 77765 9999999888772
Q ss_pred --HHHHHHHHHHhcccCcEEEEEEe
Q 028410 163 --PSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 163 --~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
..+++++++++|||||++++...
T Consensus 275 ~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 275 QHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 36889999999999999988753
No 176
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.31 E-value=1.7e-14 Score=114.62 Aligned_cols=107 Identities=15% Similarity=0.113 Sum_probs=80.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEcccch
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTAHLA 158 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~~~~~ 158 (209)
.++.+|||+|||+|..+..+++.+ .+|+|+|+|+.+ +.++++|+.+++ ++++||+|+++...
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPW 154 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCC
T ss_pred cCCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCc
Confidence 478999999999999999999987 599999999863 347888888776 57899999998666
Q ss_pred hhh-CHHHHHHHHHHhcccCcEEEEEEe----------cCCcccHHHHHHHhcccc
Q 028410 159 EAL-FPSRFVGEMERTVKIGGVCMVLME----------ECAGREIKQIVELFRTSS 203 (209)
Q Consensus 159 ~~~-~~~~~l~~~~r~LkpgG~lil~~~----------~~~~~~~~~~~~l~~~~~ 203 (209)
++. ++...+.++.++|||||.+++... -+.......+..++...+
T Consensus 155 ~~~~~~~~~~~~~~~~L~pgG~~i~~~~~~~~~~~~~~lp~~~~~~~~~~~l~~~g 210 (241)
T 3gdh_A 155 GGPDYATAETFDIRTMMSPDGFEIFRLSKKITNNIVYFLPRNADIDQVASLAGPGG 210 (241)
T ss_dssp SSGGGGGSSSBCTTTSCSSCHHHHHHHHHHHCSCEEEEEETTBCHHHHHHTTCTTC
T ss_pred CCcchhhhHHHHHHhhcCCcceeHHHHHHhhCCceEEECCCCCCHHHHHHHhccCC
Confidence 655 455567788889999998544321 122335566666665443
No 177
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.31 E-value=4.9e-12 Score=108.97 Aligned_cols=91 Identities=20% Similarity=0.157 Sum_probs=69.8
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCCCC------------------------cEEEcCCCCC--CC-
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDSLP------------------------LVSRADPHNL--PF- 144 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~~~------------------------~~~~~d~~~~--~~- 144 (209)
.+.++.+|||+|||+|..+..+++ .|..+|+|+|+++.++ .++++|.... ++
T Consensus 239 ~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 239 QLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccc
Confidence 567899999999999999999998 4666899999987632 2445543322 22
Q ss_pred -CCCceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 145 -FDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 145 -~~~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
..++||+|+++.....-++...+.++.+.|||||++++.
T Consensus 319 ~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 319 ELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred cccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEe
Confidence 247899999875543336778899999999999997765
No 178
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.30 E-value=3.9e-13 Score=101.86 Aligned_cols=107 Identities=12% Similarity=0.088 Sum_probs=76.3
Q ss_pred cCCCCCeEEEEcCCCChh--HHHHHhcCCceEEEecCCCCCCcEEEcCCCCCCC---CCCceeeEEcccchhhh--CHHH
Q 028410 93 LLFNHSKVLCVSAGAGHE--VMAFNSIGVADVTGVELMDSLPLVSRADPHNLPF---FDEAFDVAFTAHLAEAL--FPSR 165 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~--~~~la~~~~~~v~~vD~s~~~~~~~~~d~~~~~~---~~~~fD~i~~~~~~~~~--~~~~ 165 (209)
.++++.+|||+|||.... +..+.+....+ ....+.+.++|+.++++ ++++||+|+++.+.+++ ++..
T Consensus 9 g~~~g~~vL~~~~g~v~vD~s~~ml~~a~~~------~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~ 82 (176)
T 2ld4_A 9 GISAGQFVAVVWDKSSPVEALKGLVDKLQAL------TGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAE 82 (176)
T ss_dssp TCCTTSEEEEEECTTSCHHHHHHHHHHHHHH------TTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHH
T ss_pred CCCCCCEEEEecCCceeeeCCHHHHHHHHHh------cccCcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHH
Confidence 458899999999997420 11111100000 01126788999999887 88999999998887776 7899
Q ss_pred HHHHHHHhcccCcEEEEEEecCC-------cccHHHHHHHhcccccc
Q 028410 166 FVGEMERTVKIGGVCMVLMEECA-------GREIKQIVELFRTSSFT 205 (209)
Q Consensus 166 ~l~~~~r~LkpgG~lil~~~~~~-------~~~~~~~~~l~~~~~~~ 205 (209)
++++++|+|||||++++...... ......+.+.+..+||+
T Consensus 83 ~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGfi 129 (176)
T 2ld4_A 83 ILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLV 129 (176)
T ss_dssp HHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTCE
T ss_pred HHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCCc
Confidence 99999999999999988644321 12367788889988883
No 179
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.30 E-value=4.1e-12 Score=101.54 Aligned_cols=87 Identities=13% Similarity=0.096 Sum_probs=68.4
Q ss_pred CCCCeEEEEcCCCChhHHHHHh-cC-CceEEEecCCCCCCc----------------EEEcCCCCC-CCC-----CCcee
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS-IG-VADVTGVELMDSLPL----------------VSRADPHNL-PFF-----DEAFD 150 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~-~~-~~~v~~vD~s~~~~~----------------~~~~d~~~~-~~~-----~~~fD 150 (209)
.++.+|||+|||+|..+..+++ .+ .++|+++|+++.+++ ++++|+.+. +.. +++||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 4678999999999999999998 33 569999999998664 566666543 211 57899
Q ss_pred eEEcccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 151 VAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 151 ~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
+|++... ..+...+++++.++|||||.+++.
T Consensus 139 ~V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 139 FIFIDAD--KTNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEEEESC--GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcCC--hHHhHHHHHHHHHhcCCCeEEEEE
Confidence 9998643 225677899999999999998774
No 180
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.29 E-value=9.2e-12 Score=102.05 Aligned_cols=109 Identities=15% Similarity=0.148 Sum_probs=80.0
Q ss_pred ccCCCCCeEEEEcCCC------ChhHHHHHh-cC-CceEEEecCCCC--CCcE-EEcCCCCCCCCCCceeeEEcccchh-
Q 028410 92 SLLFNHSKVLCVSAGA------GHEVMAFNS-IG-VADVTGVELMDS--LPLV-SRADPHNLPFFDEAFDVAFTAHLAE- 159 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~------G~~~~~la~-~~-~~~v~~vD~s~~--~~~~-~~~d~~~~~~~~~~fD~i~~~~~~~- 159 (209)
..++++.+|||+|||+ |. ..+++ .+ .++|+|+|+++. .+.+ +++|+.+++++ ++||+|+++....
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~v~~v~~~i~gD~~~~~~~-~~fD~Vvsn~~~~~ 135 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTA-NKWDLIISDMYDPR 135 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGCCCS-SCEEEEEECCCCCC
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCCCCCCEEEEECccccCCcc-CcccEEEEcCCccc
Confidence 3568899999999955 55 33444 44 469999999987 3458 99999988764 7899999952211
Q ss_pred -------h---h-CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccccc
Q 028410 160 -------A---L-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSFT 205 (209)
Q Consensus 160 -------~---~-~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~~ 205 (209)
+ . ....+++++.++|||||.+++.+.... ...++.++++..+|.
T Consensus 136 ~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~--~~~~l~~~l~~~GF~ 190 (290)
T 2xyq_A 136 TKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS--WNADLYKLMGHFSWW 190 (290)
T ss_dssp ---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS--CCHHHHHHHTTEEEE
T ss_pred cccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC--CHHHHHHHHHHcCCc
Confidence 1 1 135889999999999999988765543 335788888887763
No 181
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.29 E-value=6.7e-13 Score=99.45 Aligned_cols=92 Identities=23% Similarity=0.181 Sum_probs=70.7
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC--------------CcEEEcCCCCC-C-C--CCCceeeEEccc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL--------------PLVSRADPHNL-P-F--FDEAFDVAFTAH 156 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~--------------~~~~~~d~~~~-~-~--~~~~fD~i~~~~ 156 (209)
.++.+|||+|||+|..+..+++.+. +++|+|+++.+ +.+.++|+.+. + . .+++||+|+++.
T Consensus 40 ~~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 40 PRRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TTCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred cCCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 3788999999999999999999866 59999999874 34667776652 2 1 134899999975
Q ss_pred chhhhCHHHHHHHHH--HhcccCcEEEEEEecCC
Q 028410 157 LAEALFPSRFVGEME--RTVKIGGVCMVLMEECA 188 (209)
Q Consensus 157 ~~~~~~~~~~l~~~~--r~LkpgG~lil~~~~~~ 188 (209)
..+ .+..++++.+. ++|||||.+++.+....
T Consensus 119 ~~~-~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 119 PYA-MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp CTT-SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred CCc-hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 544 44556677776 99999999988877653
No 182
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.29 E-value=2.4e-12 Score=101.63 Aligned_cols=86 Identities=9% Similarity=0.163 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCCCChhHHHHHh-cC-CceEEEecCCCCCC-----------------cEEEcCCCCC--CCCCCceeeEE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS-IG-VADVTGVELMDSLP-----------------LVSRADPHNL--PFFDEAFDVAF 153 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~-~~-~~~v~~vD~s~~~~-----------------~~~~~d~~~~--~~~~~~fD~i~ 153 (209)
+++.+|||+|||+|..+..+++ .+ .++|+++|+++.++ .++.+|+.+. .+++++||+|+
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~ 134 (221)
T 3dr5_A 55 NGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVF 134 (221)
T ss_dssp TTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEE
T ss_pred CCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEE
Confidence 3455999999999999999998 43 57999999998733 3666666553 23468999999
Q ss_pred cccchhhhCHHHHHHHHHHhcccCcEEEE
Q 028410 154 TAHLAEALFPSRFVGEMERTVKIGGVCMV 182 (209)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~r~LkpgG~lil 182 (209)
+.... .+...+++++.++|||||.+++
T Consensus 135 ~d~~~--~~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 135 GQVSP--MDLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp ECCCT--TTHHHHHHHHHHHEEEEEEEEE
T ss_pred EcCcH--HHHHHHHHHHHHHcCCCcEEEE
Confidence 85321 2567789999999999999766
No 183
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.29 E-value=9e-12 Score=103.97 Aligned_cols=102 Identities=19% Similarity=0.202 Sum_probs=74.8
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCC--------------------------CCcEEEcCCCCC--
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS--------------------------LPLVSRADPHNL-- 142 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~--------------------------~~~~~~~d~~~~-- 142 (209)
.+.++.+|||+|||+|..+..+++. | .++|+++|+++. .+.+..+|+.+.
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~ 181 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE 181 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc
Confidence 5688999999999999999999984 4 369999999873 356788999886
Q ss_pred CCCCCceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhc
Q 028410 143 PFFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (209)
Q Consensus 143 ~~~~~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~ 200 (209)
++++++||+|+++.. ++..++.++.++|||||.+++.... ..+...+.+.++
T Consensus 182 ~~~~~~fD~V~~~~~----~~~~~l~~~~~~LkpgG~lv~~~~~--~~~~~~~~~~l~ 233 (336)
T 2b25_A 182 DIKSLTFDAVALDML----NPHVTLPVFYPHLKHGGVCAVYVVN--ITQVIELLDGIR 233 (336)
T ss_dssp ------EEEEEECSS----STTTTHHHHGGGEEEEEEEEEEESS--HHHHHHHHHHHH
T ss_pred ccCCCCeeEEEECCC----CHHHHHHHHHHhcCCCcEEEEEeCC--HHHHHHHHHHHH
Confidence 566788999998432 3455889999999999998766553 445555555444
No 184
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.28 E-value=1.8e-12 Score=102.75 Aligned_cols=86 Identities=19% Similarity=0.262 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC----------------CcEEEcCCCCC-C-CCCCceeeEEcc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----------------PLVSRADPHNL-P-FFDEAFDVAFTA 155 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~----------------~~~~~~d~~~~-~-~~~~~fD~i~~~ 155 (209)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+ +.++.+|+.+. + ..+++||+|++.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 57889999999999999999983 35699999999863 45788888764 3 337899999975
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEE
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMV 182 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil 182 (209)
.. ..+...+++++.+.|||||++++
T Consensus 150 ~~--~~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 150 AA--KAQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp TT--SSSHHHHHHHHGGGEEEEEEEEE
T ss_pred Cc--HHHHHHHHHHHHHhcCCCeEEEE
Confidence 32 12578899999999999999766
No 185
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.28 E-value=3e-12 Score=104.08 Aligned_cols=107 Identities=12% Similarity=0.067 Sum_probs=78.3
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCCCC---------------cEEEcCCCCCCC----CCCceee
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSLP---------------LVSRADPHNLPF----FDEAFDV 151 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~~~---------------~~~~~d~~~~~~----~~~~fD~ 151 (209)
...++.+|||+|||+|..+..+++. +.++|+++|+++.++ .++.+|+.+++. .+++||+
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~ 159 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDK 159 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCE
Confidence 3478899999999999999999983 447999999998743 366777766543 2678999
Q ss_pred EEccc------ch------------hhh-CHHHHHHHHHHhcccCcEEEEEEecCCccc-HHHHHHHh
Q 028410 152 AFTAH------LA------------EAL-FPSRFVGEMERTVKIGGVCMVLMEECAGRE-IKQIVELF 199 (209)
Q Consensus 152 i~~~~------~~------------~~~-~~~~~l~~~~r~LkpgG~lil~~~~~~~~~-~~~~~~l~ 199 (209)
|++.. +. ... ...+++.++.+.|||||.+++.+......+ ...+.+++
T Consensus 160 Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l 227 (274)
T 3ajd_A 160 ILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYIL 227 (274)
T ss_dssp EEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHH
T ss_pred EEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHH
Confidence 99851 11 111 458899999999999999998877654333 33344444
No 186
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.27 E-value=7.8e-12 Score=99.97 Aligned_cols=89 Identities=12% Similarity=0.048 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc---CCceEEEecCCCCC----------------------------------------
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI---GVADVTGVELMDSL---------------------------------------- 131 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~---~~~~v~~vD~s~~~---------------------------------------- 131 (209)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 46789999999999999999875 33589999999763
Q ss_pred ----Cc-------------EEEcCCCCCCC-----CCCceeeEEcccchhhh----------CHHHHHHHHHHhcccCcE
Q 028410 132 ----PL-------------VSRADPHNLPF-----FDEAFDVAFTAHLAEAL----------FPSRFVGEMERTVKIGGV 179 (209)
Q Consensus 132 ----~~-------------~~~~d~~~~~~-----~~~~fD~i~~~~~~~~~----------~~~~~l~~~~r~LkpgG~ 179 (209)
+. +.++|+.+... ..++||+|+++...... ....+++++.++|||||+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 33 77788877321 34589999997433322 246899999999999999
Q ss_pred EEEE
Q 028410 180 CMVL 183 (209)
Q Consensus 180 lil~ 183 (209)
++++
T Consensus 210 l~~~ 213 (250)
T 1o9g_A 210 IAVT 213 (250)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9884
No 187
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.27 E-value=3.5e-12 Score=100.17 Aligned_cols=103 Identities=14% Similarity=0.160 Sum_probs=73.9
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCCC----------------CcEEEcCCCC-CCC-C----CCcee
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSL----------------PLVSRADPHN-LPF-F----DEAFD 150 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~~----------------~~~~~~d~~~-~~~-~----~~~fD 150 (209)
.++.+|||+|||+|..+..+++. +.++|+++|+++.+ +.++++|+.+ ++. + .++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 46789999999999999999983 24699999999874 3477888754 332 2 27899
Q ss_pred eEEcccchhhh-CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhc
Q 028410 151 VAFTAHLAEAL-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (209)
Q Consensus 151 ~i~~~~~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~ 200 (209)
+|++....++. +..+++.++ ++|||||.+++.... ....+.+.+.++
T Consensus 137 ~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~--~~~~~~~~~~l~ 184 (221)
T 3u81_A 137 MVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVI--VPGTPDFLAYVR 184 (221)
T ss_dssp EEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCC--CCCCHHHHHHHH
T ss_pred EEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCC--CcchHHHHHHHh
Confidence 99997654444 556777777 999999997654332 223345555444
No 188
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.27 E-value=4.8e-12 Score=100.29 Aligned_cols=89 Identities=22% Similarity=0.257 Sum_probs=70.2
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC---------------CcEEEcCCCCCCCCCC-ceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL---------------PLVSRADPHNLPFFDE-AFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~-~fD~i~~~ 155 (209)
...++.+|||+|||+|..+..+++. + .+|+++|+++.+ +.+..+|. ..+++++ .||+|++.
T Consensus 88 ~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~ 165 (235)
T 1jg1_A 88 NLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVT 165 (235)
T ss_dssp TCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEEC
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEEC
Confidence 4578899999999999999999985 5 699999999763 34677776 3444444 59999998
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEEEecCC
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEECA 188 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~ 188 (209)
...+++. .++.+.|||||.+++.+....
T Consensus 166 ~~~~~~~-----~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 166 AGAPKIP-----EPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp SBBSSCC-----HHHHHTEEEEEEEEEEECSSS
T ss_pred CcHHHHH-----HHHHHhcCCCcEEEEEEecCC
Confidence 7666553 378999999999999887643
No 189
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.27 E-value=5.3e-12 Score=100.03 Aligned_cols=107 Identities=8% Similarity=0.017 Sum_probs=83.9
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcC-CceEEEecCCCCCC----------------cEEEcCCCCCCCCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIG-VADVTGVELMDSLP----------------LVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~-~~~v~~vD~s~~~~----------------~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
...++.+|+|+|||+|..+..+++.+ ..+|+++|+++.++ .+..+|..+...++++||+|+..
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~Ivia 97 (230)
T 3lec_A 18 YVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITIC 97 (230)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEE
T ss_pred hCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEe
Confidence 44788999999999999999999964 56899999999844 47888887766555589998876
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
++...+ ..+++.+..+.|+++|++++.-. .....+.+.+...||
T Consensus 98 GmGg~l-I~~IL~~~~~~l~~~~~lIlqp~----~~~~~lr~~L~~~Gf 141 (230)
T 3lec_A 98 GMGGRL-IADILNNDIDKLQHVKTLVLQPN----NREDDLRKWLAANDF 141 (230)
T ss_dssp EECHHH-HHHHHHHTGGGGTTCCEEEEEES----SCHHHHHHHHHHTTE
T ss_pred CCchHH-HHHHHHHHHHHhCcCCEEEEECC----CChHHHHHHHHHCCC
Confidence 554422 46778888899999999776653 347778888887777
No 190
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.27 E-value=1.4e-11 Score=103.73 Aligned_cols=87 Identities=8% Similarity=0.037 Sum_probs=72.9
Q ss_pred CCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCC---------CCcEEEcCCCCCCCCCCceeeEEcccchhhh-CH
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDS---------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL-FP 163 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~---------~~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~~ 163 (209)
.+..+|||+|||+|..+..+++ .+..+++++|++ . .+.++.+|+.+ +++ +||+|++.++.++. ++
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d~ 267 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQP-QVVGNLTGNENLNFVGGDMFK-SIP--SADAVLLKWVLHDWNDE 267 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECH-HHHSSCCCCSSEEEEECCTTT-CCC--CCSEEEEESCGGGSCHH
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccH-HHHhhcccCCCcEEEeCccCC-CCC--CceEEEEcccccCCCHH
Confidence 5678999999999999999998 455689999983 3 24578899887 665 49999999998888 65
Q ss_pred H--HHHHHHHHhccc---CcEEEEEEe
Q 028410 164 S--RFVGEMERTVKI---GGVCMVLME 185 (209)
Q Consensus 164 ~--~~l~~~~r~Lkp---gG~lil~~~ 185 (209)
. ++++++.++||| ||++++...
T Consensus 268 ~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 268 QSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp HHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 5 999999999999 999888753
No 191
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.27 E-value=5.1e-12 Score=104.83 Aligned_cols=112 Identities=10% Similarity=0.030 Sum_probs=82.4
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCCCC---------------cEEEcCCCCCCCCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSLP---------------LVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~~~---------------~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
...++.+|||+|||+|..+..+++. +.++|+++|+++.++ .++++|+.+++..+++||+|+++
T Consensus 115 ~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d 194 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLD 194 (315)
T ss_dssp CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEe
Confidence 4578899999999999999999983 346999999998743 46778887776556789999984
Q ss_pred c------chhhh-----------------CHHHHHHHHHHhcccCcEEEEEEecCCccc-HHHHHHHhccccc
Q 028410 156 H------LAEAL-----------------FPSRFVGEMERTVKIGGVCMVLMEECAGRE-IKQIVELFRTSSF 204 (209)
Q Consensus 156 ~------~~~~~-----------------~~~~~l~~~~r~LkpgG~lil~~~~~~~~~-~~~~~~l~~~~~~ 204 (209)
. +.... ....++.++.++|||||++++.+......+ ...+.+++++.+|
T Consensus 195 ~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~ 267 (315)
T 1ixk_A 195 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDV 267 (315)
T ss_dssp CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSE
T ss_pred CCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCC
Confidence 1 11110 115889999999999999998876654333 3344556666665
No 192
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.26 E-value=6.3e-12 Score=100.69 Aligned_cols=87 Identities=11% Similarity=0.043 Sum_probs=68.4
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCCC----------------CcEEEcCCCC-CCCC--CCceeeEE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSL----------------PLVSRADPHN-LPFF--DEAFDVAF 153 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~~----------------~~~~~~d~~~-~~~~--~~~fD~i~ 153 (209)
.++.+|||+|||+|..+..+++. + .++|+++|+++.+ +.++++|+.+ ++.. .++||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 57889999999999999999984 3 5799999999863 3477888765 3322 35899999
Q ss_pred cccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
+... ..+...+++++.++|||||++++.
T Consensus 142 ~d~~--~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 142 IDAD--KPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp ECSC--GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred ECCc--hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 8542 125678999999999999987665
No 193
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.25 E-value=3.6e-12 Score=105.53 Aligned_cols=107 Identities=18% Similarity=0.238 Sum_probs=78.5
Q ss_pred CCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCCCC---------------cEEEcCCCCC--CCCCCceeeEEcccc-
Q 028410 97 HSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDSLP---------------LVSRADPHNL--PFFDEAFDVAFTAHL- 157 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~~~---------------~~~~~d~~~~--~~~~~~fD~i~~~~~- 157 (209)
..+|||+|||+|..+.++++ .+..+++++|+++.++ .++.+|+.+. .+++++||+|++...
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 34999999999999999998 5555999999998744 3667776553 345689999998532
Q ss_pred ----hhhhCHHHHHHHHHHhcccCcEEEEEEecCCcc-----cHHHHHHHhcccc
Q 028410 158 ----AEALFPSRFVGEMERTVKIGGVCMVLMEECAGR-----EIKQIVELFRTSS 203 (209)
Q Consensus 158 ----~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~-----~~~~~~~l~~~~~ 203 (209)
..++...+++++++++|||||++++........ ....+.+.|....
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~ 224 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVA 224 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceE
Confidence 223345889999999999999998887654321 2344555665543
No 194
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.25 E-value=1.5e-11 Score=96.66 Aligned_cols=89 Identities=19% Similarity=0.262 Sum_probs=71.6
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCCC--------------------CcEEEcCCCCCCCCCCceee
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSL--------------------PLVSRADPHNLPFFDEAFDV 151 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~~--------------------~~~~~~d~~~~~~~~~~fD~ 151 (209)
..++.+|||+|||+|..+..+++. + .++|+++|+++.+ +.+..+|+...+.++++||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 578899999999999999999984 3 3599999998763 34677887766556788999
Q ss_pred EEcccchhhhCHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 152 i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
|++....+++ +.++.+.|||||.+++.+...
T Consensus 155 i~~~~~~~~~-----~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 155 IHVGAAAPVV-----PQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp EEECSBBSSC-----CHHHHHTEEEEEEEEEEESCT
T ss_pred EEECCchHHH-----HHHHHHhcCCCcEEEEEEecC
Confidence 9987655433 468899999999999988654
No 195
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.24 E-value=1.1e-11 Score=104.35 Aligned_cols=96 Identities=20% Similarity=0.123 Sum_probs=77.6
Q ss_pred cccCCCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCCC---------------CcEEEcCCCCCCCCCCceeeEE
Q 028410 91 KSLLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAF 153 (209)
Q Consensus 91 ~~~~~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~i~ 153 (209)
....+++.+|||+|||+|.++..++.. +..+++|+|+++.+ +.+.++|+.+++.+.+.||+|+
T Consensus 198 ~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii 277 (354)
T 3tma_A 198 LADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRIL 277 (354)
T ss_dssp HTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEE
T ss_pred HhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEE
Confidence 345678899999999999999999984 34699999999863 4588999999888788899999
Q ss_pred cccchh-------hh--CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 154 TAHLAE-------AL--FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 154 ~~~~~~-------~~--~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
++.-.. .. ....+++++.++|||||.+++.+..
T Consensus 278 ~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 278 ANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp ECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred ECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 962211 11 2378899999999999999888764
No 196
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.24 E-value=6e-12 Score=102.28 Aligned_cols=91 Identities=14% Similarity=0.089 Sum_probs=75.0
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC---------------CcEEEcCCCCCCCCCCceeeEEccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAFTAH 156 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~i~~~~ 156 (209)
.+.++.+|||+|||+|.++..+++. +..+|+|+|+++.+ +.++.+|+.+.+. +++||+|+++.
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~ 194 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGY 194 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECC
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECC
Confidence 3578899999999999999999985 45699999999763 3478899888743 67899999864
Q ss_pred chhhhCHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 157 LAEALFPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 157 ~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
.. +..+++.++.+.|||||.+++.....
T Consensus 195 p~---~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 195 VH---KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CS---SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred cc---cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 43 46778999999999999998877654
No 197
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.23 E-value=3.9e-12 Score=106.34 Aligned_cols=105 Identities=15% Similarity=0.112 Sum_probs=77.0
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC-----------------CcEEEcCCCCCCC----CCCceeeEE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-----------------PLVSRADPHNLPF----FDEAFDVAF 153 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~-----------------~~~~~~d~~~~~~----~~~~fD~i~ 153 (209)
.++.+|||+|||+|.++..++..+. +|+++|+|+.+ +.++++|+.+... .+++||+|+
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 5678999999999999999999876 99999999874 3466677655321 156899999
Q ss_pred ccc----------chhhh-CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhc
Q 028410 154 TAH----------LAEAL-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (209)
Q Consensus 154 ~~~----------~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~ 200 (209)
++. +.... +..+++.++.++|||||.+++............+.+++.
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~ 288 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMR 288 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHH
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHH
Confidence 942 12223 567899999999999999777766654444444444433
No 198
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.23 E-value=5e-12 Score=99.93 Aligned_cols=87 Identities=17% Similarity=0.182 Sum_probs=70.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC----------------CcEEEcCCCCC-CCC--CCceeeEEc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----------------PLVSRADPHNL-PFF--DEAFDVAFT 154 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~----------------~~~~~~d~~~~-~~~--~~~fD~i~~ 154 (209)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+ +.+..+|+.+. +.. +++||+|++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 57789999999999999999984 44699999999763 44677777663 332 578999998
Q ss_pred ccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 155 AHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 155 ~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
..... +...+++++.+.|||||.+++.
T Consensus 133 ~~~~~--~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 133 DAAKG--QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EGGGS--CHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCHH--HHHHHHHHHHHHcCCCeEEEEE
Confidence 65432 6789999999999999998775
No 199
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.23 E-value=9.4e-12 Score=99.41 Aligned_cols=107 Identities=9% Similarity=-0.021 Sum_probs=82.3
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcC-CceEEEecCCCCCC----------------cEEEcCCCCCCCCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIG-VADVTGVELMDSLP----------------LVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~-~~~v~~vD~s~~~~----------------~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
...++.+|||+|||+|..+..+++.+ ..+|+++|+++.++ .+..+|..+...++++||+|+..
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Ivia 97 (244)
T 3gnl_A 18 YITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIA 97 (244)
T ss_dssp TCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEE
T ss_pred hCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEe
Confidence 44788999999999999999999964 46899999999843 47788877755444469999876
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
++...+ ...++.+..+.|+++|++++.-. .....+.+.+...||
T Consensus 98 gmGg~l-I~~IL~~~~~~L~~~~~lIlq~~----~~~~~lr~~L~~~Gf 141 (244)
T 3gnl_A 98 GMGGTL-IRTILEEGAAKLAGVTKLILQPN----IAAWQLREWSEQNNW 141 (244)
T ss_dssp EECHHH-HHHHHHHTGGGGTTCCEEEEEES----SCHHHHHHHHHHHTE
T ss_pred CCchHH-HHHHHHHHHHHhCCCCEEEEEcC----CChHHHHHHHHHCCC
Confidence 554422 46678888999999999777653 256777777777776
No 200
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.23 E-value=2.5e-11 Score=102.88 Aligned_cols=108 Identities=15% Similarity=0.140 Sum_probs=79.0
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCC-ceEEEecCCCCC---------------CcEEEcCCCC-CCC-CCCceeeEEccc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGV-ADVTGVELMDSL---------------PLVSRADPHN-LPF-FDEAFDVAFTAH 156 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~-~~v~~vD~s~~~---------------~~~~~~d~~~-~~~-~~~~fD~i~~~~ 156 (209)
.++.+|||+| |+|.++..++..+. .+|+++|+++.+ +.++++|+.+ +|. .+++||+|+++.
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 4678999999 99999999988643 699999999874 4478999988 664 457899999975
Q ss_pred chhhhCHHHHHHHHHHhcccCcEE-EEEEecCCcccH---HHHHHHhc-cccc
Q 028410 157 LAEALFPSRFVGEMERTVKIGGVC-MVLMEECAGREI---KQIVELFR-TSSF 204 (209)
Q Consensus 157 ~~~~~~~~~~l~~~~r~LkpgG~l-il~~~~~~~~~~---~~~~~l~~-~~~~ 204 (209)
.........++.++.++|||||++ ++.+... ..+. ..+.+.+. ..++
T Consensus 250 p~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~~-~~~~~~~~~~~~~l~~~~g~ 301 (373)
T 2qm3_A 250 PETLEAIRAFVGRGIATLKGPRCAGYFGITRR-ESSLDKWREIQKLLLNEFNV 301 (373)
T ss_dssp CSSHHHHHHHHHHHHHTBCSTTCEEEEEECTT-TCCHHHHHHHHHHHHHTSCC
T ss_pred CCchHHHHHHHHHHHHHcccCCeEEEEEEecC-cCCHHHHHHHHHHHHHhcCc
Confidence 433223588999999999999954 5555431 1223 55666665 5544
No 201
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.23 E-value=4.1e-12 Score=98.93 Aligned_cols=86 Identities=13% Similarity=0.131 Sum_probs=68.3
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCCCC----------------cEEEcCCCCC-CCCCCceeeEEcc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSLP----------------LVSRADPHNL-PFFDEAFDVAFTA 155 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~~~----------------~~~~~d~~~~-~~~~~~fD~i~~~ 155 (209)
.++.+|||+|||+|..+..+++. + .++|+++|+++.++ .++.+|+.+. +..++ ||+|++.
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 46789999999999999999984 3 46999999998743 4677887653 44456 9999985
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
.. ..+...+++++.++|||||.+++.
T Consensus 134 ~~--~~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 134 CD--VFNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp TT--TSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CC--hhhhHHHHHHHHHhcCCCeEEEEE
Confidence 31 236789999999999999998763
No 202
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.23 E-value=2.1e-11 Score=96.08 Aligned_cols=89 Identities=19% Similarity=0.261 Sum_probs=70.9
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHh-cCC------ceEEEecCCCCC--------------------CcEEEcCCCCCCCC
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNS-IGV------ADVTGVELMDSL--------------------PLVSRADPHNLPFF 145 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~-~~~------~~v~~vD~s~~~--------------------~~~~~~d~~~~~~~ 145 (209)
.++++.+|||+|||+|..+..+++ .+. ++|+++|+++.+ +.+..+|..+ +++
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~ 159 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYP 159 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCG
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCC
Confidence 357889999999999999999988 342 599999999763 3467788776 444
Q ss_pred C-CceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 146 D-EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 146 ~-~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
+ ++||+|++....+++ ..++.+.|||||++++.+...
T Consensus 160 ~~~~fD~I~~~~~~~~~-----~~~~~~~LkpgG~lvi~~~~~ 197 (227)
T 1r18_A 160 PNAPYNAIHVGAAAPDT-----PTELINQLASGGRLIVPVGPD 197 (227)
T ss_dssp GGCSEEEEEECSCBSSC-----CHHHHHTEEEEEEEEEEESCS
T ss_pred cCCCccEEEECCchHHH-----HHHHHHHhcCCCEEEEEEecC
Confidence 4 789999997665544 378999999999999988753
No 203
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.23 E-value=2.3e-11 Score=98.65 Aligned_cols=108 Identities=9% Similarity=0.075 Sum_probs=77.4
Q ss_pred CCCeEEEEcCCC--ChhHHHHHh--cCCceEEEecCCCCCC---------------cEEEcCCCCCC------CCCCcee
Q 028410 96 NHSKVLCVSAGA--GHEVMAFNS--IGVADVTGVELMDSLP---------------LVSRADPHNLP------FFDEAFD 150 (209)
Q Consensus 96 ~~~~iLDiGcG~--G~~~~~la~--~~~~~v~~vD~s~~~~---------------~~~~~d~~~~~------~~~~~fD 150 (209)
....|||+|||+ +..+..+++ .+..+|+++|.|+.|+ .++++|+.+++ ...+.||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 347899999997 444455554 3557999999999755 37899998852 1134565
Q ss_pred -----eEEcccchhhh-C---HHHHHHHHHHhcccCcEEEEEEecCCc--ccHHHHHHHhcccc
Q 028410 151 -----VAFTAHLAEAL-F---PSRFVGEMERTVKIGGVCMVLMEECAG--REIKQIVELFRTSS 203 (209)
Q Consensus 151 -----~i~~~~~~~~~-~---~~~~l~~~~r~LkpgG~lil~~~~~~~--~~~~~~~~l~~~~~ 203 (209)
.|+++.++|++ + +..+++++.+.|+|||++++.....+. .....+.+.+++.+
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g 221 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARN 221 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTT
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcC
Confidence 57788888888 4 578999999999999999998766542 23445555555444
No 204
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.21 E-value=1.5e-11 Score=97.25 Aligned_cols=106 Identities=11% Similarity=0.065 Sum_probs=81.0
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcC-CceEEEecCCCCCC----------------cEEEcCCCC-CCCCCCceeeEEc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIG-VADVTGVELMDSLP----------------LVSRADPHN-LPFFDEAFDVAFT 154 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~-~~~v~~vD~s~~~~----------------~~~~~d~~~-~~~~~~~fD~i~~ 154 (209)
...++.+|||+|||+|..+..++..+ ..+|+++|+++.++ .+..+|..+ ++. .++||+|+.
T Consensus 12 ~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~Ivi 90 (225)
T 3kr9_A 12 FVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-TDQVSVITI 90 (225)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEE
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-CcCCCEEEE
Confidence 34788999999999999999999964 56899999999844 367777743 332 236999987
Q ss_pred ccchhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 155 AHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 155 ~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
..+...+ ...++.+..+.|+|+|++++.-. .....+.+.+...||
T Consensus 91 aG~Gg~~-i~~Il~~~~~~L~~~~~lVlq~~----~~~~~vr~~L~~~Gf 135 (225)
T 3kr9_A 91 AGMGGRL-IARILEEGLGKLANVERLILQPN----NREDDLRIWLQDHGF 135 (225)
T ss_dssp EEECHHH-HHHHHHHTGGGCTTCCEEEEEES----SCHHHHHHHHHHTTE
T ss_pred cCCChHH-HHHHHHHHHHHhCCCCEEEEECC----CCHHHHHHHHHHCCC
Confidence 6554322 57788999999999999777443 367778888888777
No 205
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.21 E-value=4e-11 Score=94.19 Aligned_cols=89 Identities=18% Similarity=0.153 Sum_probs=71.8
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-C-----CceEEEecCCCCC--------------------CcEEEcCCCCCC---
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G-----VADVTGVELMDSL--------------------PLVSRADPHNLP--- 143 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~-----~~~v~~vD~s~~~--------------------~~~~~~d~~~~~--- 143 (209)
.++++.+|||+|||+|..+..+++. + ..+|+++|+++.+ +.+..+|+.+..
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 3578899999999999999999984 2 3599999998752 457788887754
Q ss_pred -CCCCceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEEec
Q 028410 144 -FFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 144 -~~~~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
..+++||+|++....+++ +.++.+.|||||++++.+..
T Consensus 157 ~~~~~~fD~I~~~~~~~~~-----~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASEL-----PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHHCCEEEEEECSBBSSC-----CHHHHHHEEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHHH-----HHHHHHhcCCCcEEEEEEcc
Confidence 556889999997655543 47889999999999999875
No 206
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.20 E-value=9.6e-12 Score=101.75 Aligned_cols=103 Identities=13% Similarity=0.177 Sum_probs=76.8
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCce---eeEEcc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAF---DVAFTA 155 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~f---D~i~~~ 155 (209)
.++.+|||+|||+|..+..++..+..+|+|+|+|+.+ +.++++|+.+. ++ ++| |+|+++
T Consensus 122 ~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~~-~~f~~~D~Ivsn 199 (284)
T 1nv8_A 122 YGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-FK-EKFASIEMILSN 199 (284)
T ss_dssp HTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-GG-GGTTTCCEEEEC
T ss_pred cCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-cc-cccCCCCEEEEc
Confidence 3667999999999999999988744699999999873 45788888763 22 578 999997
Q ss_pred --cchh---------hh---------CHHHHHHHHH-HhcccCcEEEEEEecCCcccHHHHHHHhccc
Q 028410 156 --HLAE---------AL---------FPSRFVGEME-RTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (209)
Q Consensus 156 --~~~~---------~~---------~~~~~l~~~~-r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~ 202 (209)
++.. +- +...+++++. +.|||||.+++.+. ..+...+.++|...
T Consensus 200 PPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~---~~q~~~v~~~~~~~ 264 (284)
T 1nv8_A 200 PPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG---EDQVEELKKIVSDT 264 (284)
T ss_dssp CCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC---TTCHHHHTTTSTTC
T ss_pred CCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC---chHHHHHHHHHHhC
Confidence 1100 00 1237899999 99999999887544 45667777777653
No 207
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.20 E-value=1e-11 Score=97.37 Aligned_cols=87 Identities=10% Similarity=0.119 Sum_probs=67.9
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCCC----------------CcEEEcCCCCC-C-CCC----Ccee
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSL----------------PLVSRADPHNL-P-FFD----EAFD 150 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~~----------------~~~~~~d~~~~-~-~~~----~~fD 150 (209)
.++.+|||+|||+|..+..+++. + .++|+++|+++.+ +.++++|+.+. + +.. ++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 56789999999999999999984 3 5799999999863 34677777542 2 111 7899
Q ss_pred eEEcccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 151 VAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 151 ~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
+|++... ..+...+++++.++|||||++++.
T Consensus 143 ~v~~~~~--~~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 143 LIYIDAD--KANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp EEEECSC--GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCC--HHHHHHHHHHHHHhcCCCcEEEEe
Confidence 9997542 125788999999999999998764
No 208
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.19 E-value=8.8e-11 Score=101.28 Aligned_cols=109 Identities=16% Similarity=0.139 Sum_probs=80.6
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC--------------cEEEcCCCCCC--CCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP--------------LVSRADPHNLP--FFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~--------------~~~~~d~~~~~--~~~~~fD~i~~~ 155 (209)
...++.+|||+|||+|..+..+++. +.++|+++|+++.++ .+..+|+.+.+ +++++||.|+++
T Consensus 243 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D 322 (429)
T 1sqg_A 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLD 322 (429)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEE
T ss_pred CCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEe
Confidence 3478899999999999999999984 337999999999854 47788888876 566899999963
Q ss_pred ------cchhhh-C----------------HHHHHHHHHHhcccCcEEEEEEecCCcc-cHHHHHHHhcc
Q 028410 156 ------HLAEAL-F----------------PSRFVGEMERTVKIGGVCMVLMEECAGR-EIKQIVELFRT 201 (209)
Q Consensus 156 ------~~~~~~-~----------------~~~~l~~~~r~LkpgG~lil~~~~~~~~-~~~~~~~l~~~ 201 (209)
.+..+. + ...++.++.+.|||||++++++...... ....+.+++.+
T Consensus 323 ~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~ 392 (429)
T 1sqg_A 323 APCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR 392 (429)
T ss_dssp CCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred CCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHh
Confidence 121111 1 1478999999999999999887665333 33344455543
No 209
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.19 E-value=1.4e-11 Score=101.29 Aligned_cols=92 Identities=21% Similarity=0.212 Sum_probs=68.7
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC-------------------cEEEcCCCC-CCCCCCceeeEE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP-------------------LVSRADPHN-LPFFDEAFDVAF 153 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~-------------------~~~~~d~~~-~~~~~~~fD~i~ 153 (209)
.++.+|||+|||+|..+..+++. +..+|+++|+++.++ .++.+|+.+ ++..+++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 45689999999999999999986 667999999997633 355666544 333467899999
Q ss_pred cccchhhh------CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 154 TAHLAEAL------FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 154 ~~~~~~~~------~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
++...... ...++++++.++|||||.+++....
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 85322101 2378999999999999998887544
No 210
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.18 E-value=1.1e-11 Score=97.29 Aligned_cols=87 Identities=13% Similarity=0.015 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCCC----------------CcEEEcCCCCC-C-CC---CCceee
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSL----------------PLVSRADPHNL-P-FF---DEAFDV 151 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~~----------------~~~~~~d~~~~-~-~~---~~~fD~ 151 (209)
.++.+|||+|||+|..+..+++. + .++|+++|+++.+ +.++++|+.+. + ++ .++||+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 56889999999999999999984 3 4699999999863 34677776542 1 11 267999
Q ss_pred EEcccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 152 i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
|++.... .....++.++.++|||||.+++.
T Consensus 137 v~~d~~~--~~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 137 IFIDADK--QNNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp EEECSCG--GGHHHHHHHHHHTCCTTCEEEEE
T ss_pred EEEcCCc--HHHHHHHHHHHHhcCCCcEEEEe
Confidence 9985432 24678999999999999986654
No 211
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.18 E-value=1.5e-11 Score=100.12 Aligned_cols=92 Identities=20% Similarity=0.261 Sum_probs=70.0
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC-------------------cEEEcCCCC-CCCCCCceeeEE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP-------------------LVSRADPHN-LPFFDEAFDVAF 153 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~-------------------~~~~~d~~~-~~~~~~~fD~i~ 153 (209)
.++.+|||+|||+|..+..+++. +..+|+++|+++.++ +++.+|+.+ ++..+++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 46789999999999999999986 667999999997643 355666554 233467899999
Q ss_pred cccchh-----hhCHHHHHHHHHHhcccCcEEEEEEec
Q 028410 154 TAHLAE-----ALFPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 154 ~~~~~~-----~~~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+..... ++...++++++.++|||||.+++....
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 953321 112378999999999999998777544
No 212
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.17 E-value=2.6e-11 Score=97.17 Aligned_cols=87 Identities=11% Similarity=0.077 Sum_probs=68.6
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCCCC----------------cEEEcCCCCC-C-C-----CCCce
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSLP----------------LVSRADPHNL-P-F-----FDEAF 149 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~~~----------------~~~~~d~~~~-~-~-----~~~~f 149 (209)
.++.+|||+|||+|..+..+++. + .++|+++|+++.++ .++.+|+.+. + + ++++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 56789999999999999999983 3 46999999998743 3677777552 2 2 26789
Q ss_pred eeEEcccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 150 D~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
|+|++... ..+...+++++.++|||||.+++.
T Consensus 158 D~V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 158 DFIFVDAD--KDNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp SEEEECSC--STTHHHHHHHHHHHBCTTCCEEEE
T ss_pred EEEEEcCc--hHHHHHHHHHHHHhCCCCeEEEEe
Confidence 99998542 125788999999999999998764
No 213
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.17 E-value=1.5e-10 Score=89.16 Aligned_cols=101 Identities=12% Similarity=0.083 Sum_probs=73.3
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------CcEEEcCCCCCCCCCCceeeEEcccchhhhC-
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------PLVSRADPHNLPFFDEAFDVAFTAHLAEALF- 162 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~- 162 (209)
..++.+|||+|||+|..+..+++.+..+|+|+|+++.+ +.++++|+.+++ ++||+|+++...++..
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-----
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccC
Confidence 35788999999999999999998876689999999874 568889988864 6899999986665552
Q ss_pred --HHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccc
Q 028410 163 --PSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSS 203 (209)
Q Consensus 163 --~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~ 203 (209)
..++++++.+.+ |+ ++++... .....+.+.+...+
T Consensus 126 ~~~~~~l~~~~~~~--g~-~~~~~~~---~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 126 HSDRAFIDKAFETS--MW-IYSIGNA---KARDFLRREFSARG 162 (200)
T ss_dssp --CHHHHHHHHHHE--EE-EEEEEEG---GGHHHHHHHHHHHE
T ss_pred chhHHHHHHHHHhc--Cc-EEEEEcC---chHHHHHHHHHHCC
Confidence 257888898888 44 4444432 23455566555443
No 214
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.17 E-value=1.7e-11 Score=98.07 Aligned_cols=60 Identities=12% Similarity=0.077 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC----------------CcEEEcCCCCC---CCC---CCceeeE
Q 028410 96 NHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----------------PLVSRADPHNL---PFF---DEAFDVA 152 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~----------------~~~~~~d~~~~---~~~---~~~fD~i 152 (209)
++.+|||+|||+|..+..++.. +..+|+|+|+|+.+ +.++++|+.+. +++ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 6789999999999999998874 33599999999863 45788887762 454 3689999
Q ss_pred Ecc
Q 028410 153 FTA 155 (209)
Q Consensus 153 ~~~ 155 (209)
+++
T Consensus 145 ~~n 147 (254)
T 2h00_A 145 MCN 147 (254)
T ss_dssp EEC
T ss_pred EEC
Confidence 997
No 215
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.16 E-value=8.8e-11 Score=101.90 Aligned_cols=110 Identities=14% Similarity=0.057 Sum_probs=80.7
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCCC---------------CcEEEcCCCCCC--CCCCceeeEE
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSL---------------PLVSRADPHNLP--FFDEAFDVAF 153 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~~---------------~~~~~~d~~~~~--~~~~~fD~i~ 153 (209)
...++.+|||+|||+|..+..+++. + .++|+++|+++.+ +.+..+|+.+++ +++++||+|+
T Consensus 256 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl 335 (450)
T 2yxl_A 256 DPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVL 335 (450)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEE
Confidence 3578899999999999999999983 3 3699999999873 347788888876 5558899999
Q ss_pred cc------cchhhh-C----------------HHHHHHHHHHhcccCcEEEEEEecCCcccH-HHHHHHhccc
Q 028410 154 TA------HLAEAL-F----------------PSRFVGEMERTVKIGGVCMVLMEECAGREI-KQIVELFRTS 202 (209)
Q Consensus 154 ~~------~~~~~~-~----------------~~~~l~~~~r~LkpgG~lil~~~~~~~~~~-~~~~~l~~~~ 202 (209)
+. .+.... + ...++.++.+.|||||.+++++......+. ..+.+++.+.
T Consensus 336 ~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~ 408 (450)
T 2yxl_A 336 LDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVH 408 (450)
T ss_dssp EECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred EcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhC
Confidence 63 121111 1 157899999999999999988876644333 3444555543
No 216
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.14 E-value=5.9e-11 Score=96.02 Aligned_cols=85 Identities=12% Similarity=0.031 Sum_probs=66.6
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc-------------------EEEcCCCCCCCCCCceeeEEcc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL-------------------VSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~-------------------~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
.++.+|||+|||+|..+..+++.+ .+|+++|+++.+++ ++.+|..+.. ++||+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 456899999999999999998877 89999999977444 3344444332 789999985
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
. .+|..+++++.+.|||||.+++.....
T Consensus 147 ~----~dp~~~~~~~~~~L~pgG~lv~~~~~~ 174 (262)
T 2cmg_A 147 Q----EPDIHRIDGLKRMLKEDGVFISVAKHP 174 (262)
T ss_dssp S----CCCHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred C----CChHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 2 256679999999999999988865543
No 217
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.13 E-value=1.1e-10 Score=95.17 Aligned_cols=107 Identities=14% Similarity=0.126 Sum_probs=79.5
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC----------------cEEEcCCCCCCCCCCceeeEEcccc
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP----------------LVSRADPHNLPFFDEAFDVAFTAHL 157 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~----------------~~~~~d~~~~~~~~~~fD~i~~~~~ 157 (209)
.+++.+|||+|||+|.++..++..|..+|+++|+|+.++ .++.+|..+++ +.+.||.|+++..
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCCEEEECCC
Confidence 388999999999999999999998767999999999844 37788988876 3678999998643
Q ss_pred hhhhCHHHHHHHHHHhcccCcEEEEEEecC----CcccHHHHHHHhccccc
Q 028410 158 AEALFPSRFVGEMERTVKIGGVCMVLMEEC----AGREIKQIVELFRTSSF 204 (209)
Q Consensus 158 ~~~~~~~~~l~~~~r~LkpgG~lil~~~~~----~~~~~~~~~~l~~~~~~ 204 (209)
.. ...++..+.+.|||||.+.+..... .......+.++.+..++
T Consensus 202 ~~---~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~ 249 (278)
T 3k6r_A 202 VR---THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGY 249 (278)
T ss_dssp SS---GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTC
T ss_pred Cc---HHHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCC
Confidence 32 3456778889999999976654322 22334455555554443
No 218
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.13 E-value=4e-10 Score=94.74 Aligned_cols=92 Identities=17% Similarity=0.091 Sum_probs=74.1
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCC--------------CCCcEEEcCCCCCCCCCCceeeEEcccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMD--------------SLPLVSRADPHNLPFFDEAFDVAFTAHL 157 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~--------------~~~~~~~~d~~~~~~~~~~fD~i~~~~~ 157 (209)
.+.+..+|+|||||+|..+..+++ .+..+++..|..+ ..++++.+|+.+.+.+ .+|++++.++
T Consensus 176 ~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~v 253 (353)
T 4a6d_A 176 DLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARV 253 (353)
T ss_dssp CGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESS
T ss_pred CcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeee
Confidence 456778999999999999999998 5666888888622 1356889999876654 4799999999
Q ss_pred hhhh-CH--HHHHHHHHHhcccCcEEEEEEec
Q 028410 158 AEAL-FP--SRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 158 ~~~~-~~--~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
.|.. |. .++|+++++.|+|||+++++...
T Consensus 254 lh~~~d~~~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 254 LHDWADGKCSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp GGGSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred cccCCHHHHHHHHHHHHhhCCCCCEEEEEEee
Confidence 8877 33 57899999999999999888643
No 219
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.13 E-value=8.5e-11 Score=102.70 Aligned_cols=107 Identities=14% Similarity=0.111 Sum_probs=78.1
Q ss_pred CCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCCCC---------------cEEEcCCCCCCC-CCCceeeEEcc--
Q 028410 96 NHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSLP---------------LVSRADPHNLPF-FDEAFDVAFTA-- 155 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~~~---------------~~~~~d~~~~~~-~~~~fD~i~~~-- 155 (209)
++.+|||+|||+|..+..+++. +.+.|+++|+++.++ .++++|+.+++. .+++||.|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 8899999999999999999984 347999999998743 367788887653 46789999973
Q ss_pred ----cchhhh-----------------CHHHHHHHHHHhcccCcEEEEEEecCCcccHH-HHHHHhccc
Q 028410 156 ----HLAEAL-----------------FPSRFVGEMERTVKIGGVCMVLMEECAGREIK-QIVELFRTS 202 (209)
Q Consensus 156 ----~~~~~~-----------------~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~-~~~~l~~~~ 202 (209)
.+.... ...+++.++.++|||||++++++......+.. .+..++++.
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~ 265 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETY 265 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHS
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHC
Confidence 111110 12578999999999999999888765443333 334444443
No 220
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.12 E-value=8.8e-11 Score=97.33 Aligned_cols=92 Identities=20% Similarity=0.235 Sum_probs=70.9
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC--------------------cEEEcCCCC-CCCCCCceeeE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP--------------------LVSRADPHN-LPFFDEAFDVA 152 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~--------------------~~~~~d~~~-~~~~~~~fD~i 152 (209)
.++.+|||+|||+|..+..+++. +..+|+++|+++.++ .++.+|+.+ ++..+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 56789999999999999999985 556999999997633 345566554 23346889999
Q ss_pred Ecccchhh--------hCHHHHHHHHHHhcccCcEEEEEEec
Q 028410 153 FTAHLAEA--------LFPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 153 ~~~~~~~~--------~~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
++....+. +...++++++.++|||||.+++....
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99643322 12478999999999999999887654
No 221
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.12 E-value=6.3e-10 Score=95.14 Aligned_cols=109 Identities=20% Similarity=0.145 Sum_probs=80.2
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCCCCc------EEEcCCCCCCCCCCceeeEEccc--c-h-----
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSLPL------VSRADPHNLPFFDEAFDVAFTAH--L-A----- 158 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~~~~------~~~~d~~~~~~~~~~fD~i~~~~--~-~----- 158 (209)
.++.+|||+|||+|.++..+++. +..+++|+|+++.+++ ++++|+.+.+ ++++||+|+++- . .
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a~~~~~~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~~~ 116 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAEGILADFLLWE-PGEAFDLILGNPPYGIVGEASK 116 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCCTTEEEEESCGGGCC-CSSCEEEEEECCCCCCBSCTTT
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhCCCCcEEeCChhhcC-ccCCCCEEEECcCccCcccccc
Confidence 45679999999999999999973 4469999999998764 6788887765 357899999961 1 0
Q ss_pred ------hhh-C---------------HHHHHHHHHHhcccCcEEEEEEecC--CcccHHHHHHHhccccc
Q 028410 159 ------EAL-F---------------PSRFVGEMERTVKIGGVCMVLMEEC--AGREIKQIVELFRTSSF 204 (209)
Q Consensus 159 ------~~~-~---------------~~~~l~~~~r~LkpgG~lil~~~~~--~~~~~~~~~~l~~~~~~ 204 (209)
... . ...+++.+.+.|||||.+++++... .......+.+.+...+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 117 YPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK 186 (421)
T ss_dssp CSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE
T ss_pred cccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC
Confidence 100 0 1267899999999999999998764 23345667766655444
No 222
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.12 E-value=4.7e-11 Score=101.90 Aligned_cols=93 Identities=12% Similarity=-0.022 Sum_probs=70.3
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc--------------EEEcCCCCC-CCCCCceeeEEcccc--
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL--------------VSRADPHNL-PFFDEAFDVAFTAHL-- 157 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~--------------~~~~d~~~~-~~~~~~fD~i~~~~~-- 157 (209)
+++.+|||+|||+|.++..++..|. +|+++|+|+.+++ +.++|+.+. +...+.||+|+++.-
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred cCCCeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 5689999999999999999999876 5999999998553 556676553 121344999998521
Q ss_pred -------hhhh-CHHHHHHHHHHhcccCcEEEEEEecCC
Q 028410 158 -------AEAL-FPSRFVGEMERTVKIGGVCMVLMEECA 188 (209)
Q Consensus 158 -------~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~~ 188 (209)
.... +..+++.++.++|||||.++++.....
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 1112 447889999999999999887766543
No 223
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.12 E-value=3.7e-11 Score=95.21 Aligned_cols=87 Identities=13% Similarity=0.059 Sum_probs=67.6
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCCC----------------CcEEEcCCCC----CCCCC--Ccee
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSL----------------PLVSRADPHN----LPFFD--EAFD 150 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~~----------------~~~~~~d~~~----~~~~~--~~fD 150 (209)
.++.+|||+|||+|..+..+++. + .++++++|+++.+ +.++.+|+.+ ++..+ ++||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 46789999999999999999984 3 4699999999873 3466777543 22333 7899
Q ss_pred eEEcccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 151 VAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 151 ~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
+|++.... .+...++.++.++|||||.+++.
T Consensus 151 ~V~~d~~~--~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 151 LIFIDADK--RNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp EEEECSCG--GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEECCCH--HHHHHHHHHHHHHcCCCeEEEEe
Confidence 99986431 25688999999999999998774
No 224
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.11 E-value=1.2e-10 Score=96.82 Aligned_cols=92 Identities=22% Similarity=0.321 Sum_probs=69.2
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC-------------------cEEEcCCCC-CCCCCCceeeEE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP-------------------LVSRADPHN-LPFFDEAFDVAF 153 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~-------------------~~~~~d~~~-~~~~~~~fD~i~ 153 (209)
.++.+|||+|||+|..+..+++. +..+|+++|+++.++ +++.+|+.+ ++..+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 46789999999999999999986 567999999997643 345565544 222357899999
Q ss_pred cccch-----hhhCHHHHHHHHHHhcccCcEEEEEEec
Q 028410 154 TAHLA-----EALFPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 154 ~~~~~-----~~~~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
++... ..+...++++++.++|||||.+++....
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 86321 1112378999999999999998887644
No 225
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.11 E-value=7.7e-11 Score=96.19 Aligned_cols=92 Identities=18% Similarity=0.274 Sum_probs=68.6
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc-------------------------EEEcCCCCC-CCCCCc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL-------------------------VSRADPHNL-PFFDEA 148 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~-------------------------~~~~d~~~~-~~~~~~ 148 (209)
.++.+|||+|||+|..+..+++.+..+|+++|+++.+++ ++.+|+.+. +. +++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 567899999999999999999876679999999876433 444444321 12 578
Q ss_pred eeeEEcccchh-----hhCHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 149 FDVAFTAHLAE-----ALFPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 149 fD~i~~~~~~~-----~~~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
||+|++..... .+...++++++.++|||||.+++.....
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~ 196 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSV 196 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 99999864321 1123788999999999999988876543
No 226
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.11 E-value=3.6e-10 Score=87.37 Aligned_cols=104 Identities=14% Similarity=0.053 Sum_probs=75.4
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC--------------CcEEEcCCCCCCCCCCceeeEEcccchh
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL--------------PLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~--------------~~~~~~d~~~~~~~~~~fD~i~~~~~~~ 159 (209)
..++.+|||+|||+|..+..+++.+..+++|+|+++.+ +.++++|+.+++ ++||+|+++...+
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFG 123 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCS
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCc
Confidence 35788999999999999999998866689999999873 347788888764 4899999974433
Q ss_pred hh---CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 160 AL---FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 160 ~~---~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
.. ....+++++.+.+ ||.++++.. .......+.+.+...++
T Consensus 124 ~~~~~~~~~~l~~~~~~l--~~~~~~~~~--~~~~~~~~~~~l~~~g~ 167 (207)
T 1wy7_A 124 SQRKHADRPFLLKAFEIS--DVVYSIHLA--KPEVRRFIEKFSWEHGF 167 (207)
T ss_dssp SSSTTTTHHHHHHHHHHC--SEEEEEEEC--CHHHHHHHHHHHHHTTE
T ss_pred cccCCchHHHHHHHHHhc--CcEEEEEeC--CcCCHHHHHHHHHHCCC
Confidence 22 2367888888888 565443321 23345556666766665
No 227
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.10 E-value=1.4e-10 Score=96.96 Aligned_cols=92 Identities=18% Similarity=0.272 Sum_probs=70.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCC-------------------CcEEEcCCCCC--CCCCCceeeE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL-------------------PLVSRADPHNL--PFFDEAFDVA 152 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~-------------------~~~~~~d~~~~--~~~~~~fD~i 152 (209)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+ +.++.+|+.+. .+++++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 56789999999999999999985 45699999999763 33566776543 2346799999
Q ss_pred Ecccch-----hhhCHHHHHHHHHHhcccCcEEEEEEec
Q 028410 153 FTAHLA-----EALFPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 153 ~~~~~~-----~~~~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+++... ..+....+++++.++|||||.+++....
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAES 237 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 985321 1122478999999999999998776443
No 228
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.10 E-value=5.1e-11 Score=94.58 Aligned_cols=88 Identities=11% Similarity=0.133 Sum_probs=68.4
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCCC----------------CcEEEcCCCCC-C------------
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSL----------------PLVSRADPHNL-P------------ 143 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~~----------------~~~~~~d~~~~-~------------ 143 (209)
.++.+|||+|||+|..+..+++. + .++|+++|+++.+ +.+..+|+.+. +
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 57889999999999999999984 3 4699999999863 34667776441 1
Q ss_pred --CCC--CceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 144 --FFD--EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 144 --~~~--~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
|++ ++||+|++..... +...+++++.+.|||||.+++..
T Consensus 139 ~~f~~~~~~fD~I~~~~~~~--~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDADKE--NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTTCCSTTCEEEEEECSCGG--GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccCCCCCcCEEEEeCCHH--HHHHHHHHHHHHcCCCeEEEEEc
Confidence 233 7899999864322 45788999999999999988764
No 229
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.10 E-value=1.7e-10 Score=97.76 Aligned_cols=104 Identities=16% Similarity=0.221 Sum_probs=77.7
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcC-CceEEEecCCCCCC----------------cEEEcCCCCCCCCCCceeeEEccc
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIG-VADVTGVELMDSLP----------------LVSRADPHNLPFFDEAFDVAFTAH 156 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~-~~~v~~vD~s~~~~----------------~~~~~d~~~~~~~~~~fD~i~~~~ 156 (209)
..++.+|||+|||+|.++..++..+ .++|+|+|+++.++ .+.++|+.++++++++||+|+++.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 5788999999999999999999964 35999999998733 488999999998889999999963
Q ss_pred chh-------hh-C-HHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 157 LAE-------AL-F-PSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 157 ~~~-------~~-~-~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
... .+ + ...+++++.++| ||.+++++.. ...+.+.+++.|+
T Consensus 295 Pyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~-----~~~~~~~~~~~G~ 344 (373)
T 3tm4_A 295 PYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE-----KKAIEEAIAENGF 344 (373)
T ss_dssp CCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESC-----HHHHHHHHHHTTE
T ss_pred CCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC-----HHHHHHHHHHcCC
Confidence 211 11 1 267788888888 5665555542 3445556666555
No 230
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.10 E-value=3.5e-11 Score=104.55 Aligned_cols=109 Identities=17% Similarity=0.175 Sum_probs=78.2
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCCCC--------------cEEEcCCCCCC-CCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSLP--------------LVSRADPHNLP-FFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~~~--------------~~~~~d~~~~~-~~~~~fD~i~~~ 155 (209)
...++.+|||+|||+|..+..+++. +.+.|+++|+++.++ .+.++|+.+++ +.+++||+|+++
T Consensus 98 ~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D 177 (464)
T 3m6w_A 98 DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLD 177 (464)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEE
T ss_pred CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEEC
Confidence 3478999999999999999999983 346999999998744 36667766654 346899999963
Q ss_pred ------cchhhh-----------------CHHHHHHHHHHhcccCcEEEEEEecCCcccHHH-HHHHhcc
Q 028410 156 ------HLAEAL-----------------FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQ-IVELFRT 201 (209)
Q Consensus 156 ------~~~~~~-----------------~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~-~~~l~~~ 201 (209)
.+.... ...+++.++.+.|||||++++++......+... +..++++
T Consensus 178 ~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~ 247 (464)
T 3m6w_A 178 APCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKA 247 (464)
T ss_dssp CCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred CCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHH
Confidence 111100 127789999999999999998887764444443 3334443
No 231
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.09 E-value=8.6e-11 Score=92.32 Aligned_cols=87 Identities=18% Similarity=0.159 Sum_probs=67.4
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCCCC----------------cEEEcCCCCC--CCCC----Ccee
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSLP----------------LVSRADPHNL--PFFD----EAFD 150 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~~~----------------~~~~~d~~~~--~~~~----~~fD 150 (209)
.++.+|||+|||+|..+..+++. + .++|+++|+++.++ .++.+|+.+. .+++ ++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 67889999999999999999984 3 56999999998743 4666766442 1211 7899
Q ss_pred eEEcccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 151 VAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 151 ~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
+|++... ..+...+++++.+.|||||.+++.
T Consensus 148 ~v~~d~~--~~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 148 VAVVDAD--KENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EEEECSC--STTHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCC--HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 9998543 225678999999999999998774
No 232
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.09 E-value=7.2e-12 Score=100.18 Aligned_cols=91 Identities=20% Similarity=0.233 Sum_probs=67.5
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc-------------EEEcCCCCCCCCC-CceeeEEccc--
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL-------------VSRADPHNLPFFD-EAFDVAFTAH-- 156 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~-------------~~~~d~~~~~~~~-~~fD~i~~~~-- 156 (209)
...++.+|||+|||+|..+..+++.+ .+|+|+|+++.+++ ++++|+.++++++ ++| .|+++-
T Consensus 26 ~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py 103 (245)
T 1yub_A 26 NLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIPY 103 (245)
T ss_dssp CCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECCS
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCCc
Confidence 45788999999999999999999976 69999999998653 6788888888764 688 566641
Q ss_pred ---------chhhh-CHHHHH----HHHHHhcccCcEEEEEEe
Q 028410 157 ---------LAEAL-FPSRFV----GEMERTVKIGGVCMVLME 185 (209)
Q Consensus 157 ---------~~~~~-~~~~~l----~~~~r~LkpgG~lil~~~ 185 (209)
+..|. ++...+ +.+.|+|||||.+.+.+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 104 HLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp SSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred cccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 11111 223344 668999999998665543
No 233
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.08 E-value=8.9e-11 Score=93.36 Aligned_cols=87 Identities=14% Similarity=0.147 Sum_probs=68.0
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-C-CceEEEecCCCCC----------------CcEEEcCCCCC-C-C-----CCCce
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSL----------------PLVSRADPHNL-P-F-----FDEAF 149 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~-~~~v~~vD~s~~~----------------~~~~~~d~~~~-~-~-----~~~~f 149 (209)
.++.+|||+|||+|..+..+++. + .++++++|+++.+ +.++.+|+.+. + + ++++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 56789999999999999999983 3 5799999999873 34677776552 2 2 25789
Q ss_pred eeEEcccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 150 D~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
|+|++... ..+...+++++.+.|||||.+++.
T Consensus 149 D~I~~d~~--~~~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 149 DFGFVDAD--KPNYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp EEEEECSC--GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEECCc--hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 99998532 125688999999999999997764
No 234
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.08 E-value=1.6e-10 Score=95.37 Aligned_cols=92 Identities=24% Similarity=0.259 Sum_probs=68.5
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC-------------------cEEEcCCCC-CCCCCCceeeEE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP-------------------LVSRADPHN-LPFFDEAFDVAF 153 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~-------------------~~~~~d~~~-~~~~~~~fD~i~ 153 (209)
.++.+|||+|||+|..+..+++. +..+|+++|+++.++ +++.+|+.+ ++..+++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 56789999999999999999986 457999999987643 355666544 333468899999
Q ss_pred cccchhh-----hCHHHHHHHHHHhcccCcEEEEEEec
Q 028410 154 TAHLAEA-----LFPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 154 ~~~~~~~-----~~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+...... +...++++++.++|||||.+++....
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 8533221 12367899999999999998877644
No 235
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.08 E-value=1.3e-10 Score=105.90 Aligned_cols=93 Identities=17% Similarity=0.175 Sum_probs=73.8
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC-----------------cEEEcCCCC-CCCCCCceeeEEccc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP-----------------LVSRADPHN-LPFFDEAFDVAFTAH 156 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~-----------------~~~~~d~~~-~~~~~~~fD~i~~~~ 156 (209)
.++.+|||+|||+|.++..++..|..+|+++|+|+.++ .++++|+.+ ++..+++||+|+++.
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 57889999999999999999987777899999998743 366777766 344467999999852
Q ss_pred -----------chhhh-CHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 157 -----------LAEAL-FPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 157 -----------~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
+.... +..+++.++.++|||||.+++.+...
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 12223 56788999999999999998777663
No 236
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.07 E-value=9.1e-11 Score=99.89 Aligned_cols=94 Identities=11% Similarity=0.044 Sum_probs=70.8
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC-----------------cEEEcCCCCC-C-C--CCCceeeEE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP-----------------LVSRADPHNL-P-F--FDEAFDVAF 153 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~-----------------~~~~~d~~~~-~-~--~~~~fD~i~ 153 (209)
.++.+|||+|||+|.++..++..+..+|+++|+|+.++ .++++|+.+. + + ..++||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 57789999999999999999987666999999999843 3667776552 2 1 245899999
Q ss_pred ccc---------chhhh-CHHHHHHHHHHhcccCcEEEEEEecCC
Q 028410 154 TAH---------LAEAL-FPSRFVGEMERTVKIGGVCMVLMEECA 188 (209)
Q Consensus 154 ~~~---------~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~~ 188 (209)
++. ..... +..+++.++.+.|+|||.+++......
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 852 11112 345678888999999999888876543
No 237
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.05 E-value=2.4e-10 Score=93.32 Aligned_cols=92 Identities=20% Similarity=0.294 Sum_probs=69.0
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC-------------------cEEEcCCCCC-CCCCCceeeEE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP-------------------LVSRADPHNL-PFFDEAFDVAF 153 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~-------------------~~~~~d~~~~-~~~~~~fD~i~ 153 (209)
.++.+|||+|||+|..+..+++. +..+++++|+++.++ .++.+|+.+. +..+++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 56789999999999999999985 457999999997633 3556665442 22367899999
Q ss_pred cccchhh-----hCHHHHHHHHHHhcccCcEEEEEEec
Q 028410 154 TAHLAEA-----LFPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 154 ~~~~~~~-----~~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+...... +...++++++.++|||||.+++....
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 8532221 12278999999999999998777543
No 238
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.05 E-value=2.1e-10 Score=95.12 Aligned_cols=92 Identities=20% Similarity=0.183 Sum_probs=65.6
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCCc-------------------EEEcCCCC-CCCCCCceeeEE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLPL-------------------VSRADPHN-LPFFDEAFDVAF 153 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~~-------------------~~~~d~~~-~~~~~~~fD~i~ 153 (209)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+++ ++.+|+.+ ++..+++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 46689999999999999999985 5579999999976433 44455443 223467899999
Q ss_pred cccchhhh-----CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 154 TAHLAEAL-----FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 154 ~~~~~~~~-----~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+....... ...++++++.++|||||.+++....
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~ 224 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGES 224 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEECCC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCC
Confidence 85432211 1278999999999999998876543
No 239
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.04 E-value=8.4e-11 Score=101.96 Aligned_cols=111 Identities=17% Similarity=0.136 Sum_probs=79.1
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCCCCc---------------EEEcCCCCCC-CCCCceeeEEc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSLPL---------------VSRADPHNLP-FFDEAFDVAFT 154 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~~~~---------------~~~~d~~~~~-~~~~~fD~i~~ 154 (209)
...++.+|||+|||+|..+..+++. +.+.|+++|+++.+++ +..+|+.+++ ..+++||.|++
T Consensus 102 ~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~ 181 (456)
T 3m4x_A 102 AAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVV 181 (456)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEE
Confidence 3578999999999999999999983 4479999999987442 5566666554 23679999997
Q ss_pred cc------chhh---------------h--CHHHHHHHHHHhcccCcEEEEEEecCCcccHHH-HHHHhcccc
Q 028410 155 AH------LAEA---------------L--FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQ-IVELFRTSS 203 (209)
Q Consensus 155 ~~------~~~~---------------~--~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~-~~~l~~~~~ 203 (209)
+. +... + ...+++.++.+.|||||.+++++.+....+... +..++.+.+
T Consensus 182 DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~ 254 (456)
T 3m4x_A 182 DAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYP 254 (456)
T ss_dssp ECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS
T ss_pred CCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCC
Confidence 41 1100 0 123789999999999999998887764444433 444555544
No 240
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.04 E-value=1.6e-10 Score=96.62 Aligned_cols=95 Identities=15% Similarity=0.164 Sum_probs=73.7
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEcccch
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTAHLA 158 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~~~~~ 158 (209)
.++.+|||+|||+|.++.. ++ +..+|+++|+|+.+ +.++.+|+.+.. ++||+|+++.-.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK 268 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH
Confidence 6889999999999999999 87 56799999999853 347788887765 789999995321
Q ss_pred hhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhc
Q 028410 159 EALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (209)
Q Consensus 159 ~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~ 200 (209)
...+++.++.+.|+|||.++++..... ...+.+.+.
T Consensus 269 ---~~~~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~~~l~ 304 (336)
T 2yx1_A 269 ---FAHKFIDKALDIVEEGGVIHYYTIGKD---FDKAIKLFE 304 (336)
T ss_dssp ---TGGGGHHHHHHHEEEEEEEEEEEEESS---SHHHHHHHH
T ss_pred ---hHHHHHHHHHHHcCCCCEEEEEEeecC---chHHHHHHH
Confidence 134788999999999999888766554 344444444
No 241
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.03 E-value=6.4e-11 Score=101.06 Aligned_cols=93 Identities=17% Similarity=0.040 Sum_probs=73.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC----------------cEEEcCCCCCCC----CCCceeeEEc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP----------------LVSRADPHNLPF----FDEAFDVAFT 154 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~----------------~~~~~d~~~~~~----~~~~fD~i~~ 154 (209)
+++.+|||+|||+|.++..++..|..+|+++|+++.++ .++.+|+.+... ++++||+|++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 57899999999999999999998767999999998733 477778766421 2578999999
Q ss_pred cc---------chhhh-CHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 155 AH---------LAEAL-FPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 155 ~~---------~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
+. +.... +...++.++.+.|||||.++++....
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 52 22222 45788999999999999988777654
No 242
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.03 E-value=1.7e-10 Score=96.54 Aligned_cols=110 Identities=14% Similarity=0.175 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-C-C----ceEEEecCCCCCC--------------cEEEcCCCCCCCCCCceeeEEc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-G-V----ADVTGVELMDSLP--------------LVSRADPHNLPFFDEAFDVAFT 154 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~-~----~~v~~vD~s~~~~--------------~~~~~d~~~~~~~~~~fD~i~~ 154 (209)
.++.+|||+|||+|.++..+++. + . .+++|+|+++.++ .+..+|.... .++++||+|++
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~-~~~~~fD~Ii~ 207 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-LLVDPVDVVIS 207 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-CCCCCEEEEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc-cccCCccEEEE
Confidence 46789999999999999998873 2 1 5899999998743 4778887663 34678999999
Q ss_pred ccchhhh-C-----------------H-HHHHHHHHHhcccCcEEEEEEecC--CcccHHHHHHHhcccccc
Q 028410 155 AHLAEAL-F-----------------P-SRFVGEMERTVKIGGVCMVLMEEC--AGREIKQIVELFRTSSFT 205 (209)
Q Consensus 155 ~~~~~~~-~-----------------~-~~~l~~~~r~LkpgG~lil~~~~~--~~~~~~~~~~l~~~~~~~ 205 (209)
+.-+.+. . . ..++.++.+.|||||++++++... +..+...+.+.+...+++
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~ 279 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHI 279 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEE
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeE
Confidence 7432221 1 1 258999999999999999998653 334456677766655543
No 243
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.01 E-value=4.2e-10 Score=91.98 Aligned_cols=60 Identities=23% Similarity=0.180 Sum_probs=51.2
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC----------------CcEEEcCCCCCCCCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
...++.+|||+|||+|..+..+++.+. +|+|+|+++.+ +.++.+|+.+.+++ +||+|+++
T Consensus 25 ~~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~n 100 (285)
T 1zq9_A 25 ALRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFDTCVAN 100 (285)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCSEEEEE
T ss_pred CCCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--hhcEEEEe
Confidence 557889999999999999999999754 99999999863 34788999887765 79999995
No 244
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.01 E-value=6.1e-10 Score=88.44 Aligned_cols=99 Identities=17% Similarity=0.183 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHhcccCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc--------------EEEcCCCCCCC
Q 028410 79 TSYAHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL--------------VSRADPHNLPF 144 (209)
Q Consensus 79 ~~~~~~~~~l~~~~~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~--------------~~~~d~~~~~~ 144 (209)
..+..+.+..... .++.+|||+|||+|.++..+. +...++|+|+++.+++ +.++|....+.
T Consensus 91 p~ld~fY~~i~~~---~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~ 165 (253)
T 3frh_A 91 AELDTLYDFIFSA---ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPP 165 (253)
T ss_dssp GGHHHHHHHHTSS---CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCC
T ss_pred hhHHHHHHHHhcC---CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCC
Confidence 3344444444333 678899999999999999887 5679999999999765 67888888775
Q ss_pred CCCceeeEEcccchhhh---CHHHHHHHHHHhcccCcEEEEEEe
Q 028410 145 FDEAFDVAFTAHLAEAL---FPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 145 ~~~~fD~i~~~~~~~~~---~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
+ +++|++++.-+.+++ .....+ ++...|+++|.+ +.+.
T Consensus 166 ~-~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vv-VsfP 206 (253)
T 3frh_A 166 A-EAGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMA-VSFP 206 (253)
T ss_dssp C-CBCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEE-EEEE
T ss_pred C-CCcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEE-EEcC
Confidence 4 599999998666666 334344 888899999764 4554
No 245
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=99.01 E-value=6.2e-09 Score=83.84 Aligned_cols=106 Identities=12% Similarity=0.040 Sum_probs=73.0
Q ss_pred ccCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCC------CC-------cEEEcCCCCCCCCCCceeeEEcccc
Q 028410 92 SLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS------LP-------LVSRADPHNLPFFDEAFDVAFTAHL 157 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~------~~-------~~~~~d~~~~~~~~~~fD~i~~~~~ 157 (209)
..++++.+|||+|||+|.+++.+++. +...++|+|+... +. ...+.+++...+++++||+|+|...
T Consensus 70 ~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~a 149 (277)
T 3evf_A 70 GYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIG 149 (277)
T ss_dssp TSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC
T ss_pred CCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCc
Confidence 46689999999999999999998874 6667777777632 21 1345555556677889999999642
Q ss_pred hh----hhCH---HHHHHHHHHhcccC-cEEEEEEecCCcccHHHHHH
Q 028410 158 AE----ALFP---SRFVGEMERTVKIG-GVCMVLMEECAGREIKQIVE 197 (209)
Q Consensus 158 ~~----~~~~---~~~l~~~~r~Lkpg-G~lil~~~~~~~~~~~~~~~ 197 (209)
.+ ..|. ..++..+.++|||| |.+++=+..+-.....++.+
T Consensus 150 pnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~ 197 (277)
T 3evf_A 150 ESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLE 197 (277)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHH
T ss_pred cCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHH
Confidence 22 1222 23468889999999 99888766632333444433
No 246
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.00 E-value=5.6e-10 Score=95.26 Aligned_cols=93 Identities=18% Similarity=0.100 Sum_probs=72.0
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC-----------------CcEEEcCCCCCCC----CCCceeeEE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-----------------PLVSRADPHNLPF----FDEAFDVAF 153 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~-----------------~~~~~~d~~~~~~----~~~~fD~i~ 153 (209)
.++.+|||+|||+|.++..++..|..+|+++|+|+.+ +.++.+|+.+... .+++||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 5788999999999999999999876799999999753 3467777765421 146899999
Q ss_pred ccc---------chhhh-CHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 154 TAH---------LAEAL-FPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 154 ~~~---------~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
++. +.... ...+++.++.+.|||||.+++++...
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 962 11222 35788999999999999988877664
No 247
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.99 E-value=1.1e-10 Score=99.19 Aligned_cols=92 Identities=17% Similarity=0.082 Sum_probs=71.7
Q ss_pred CCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC---------------cEEEcCCCCCCC----CCCceeeEEccc
Q 028410 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP---------------LVSRADPHNLPF----FDEAFDVAFTAH 156 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~---------------~~~~~d~~~~~~----~~~~fD~i~~~~ 156 (209)
++.+|||+|||+|.++..++.. ..+|+++|+|+.++ .++++|+.+... .+++||+|+++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 7789999999999999999987 46999999998743 477788766421 257899999952
Q ss_pred ---------chhhh-CHHHHHHHHHHhcccCcEEEEEEecCC
Q 028410 157 ---------LAEAL-FPSRFVGEMERTVKIGGVCMVLMEECA 188 (209)
Q Consensus 157 ---------~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~~ 188 (209)
+.... ...+++.++.+.|||||.++++.....
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 12222 457789999999999999888876643
No 248
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.92 E-value=1.5e-09 Score=87.06 Aligned_cols=89 Identities=13% Similarity=0.039 Sum_probs=70.8
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCCc--------------EEEcCCCCCCCCCCceeeEEcccchh
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLPL--------------VSRADPHNLPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~~--------------~~~~d~~~~~~~~~~fD~i~~~~~~~ 159 (209)
.+..+|||+|||+|.++..++.. +..+++++|+++.+++ +.+.|...-+ +.+++|++++.-+.+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTLP 209 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHHH
Confidence 66889999999999999999884 7789999999999775 5566665544 578899999988888
Q ss_pred hhCH--H-HHHHHHHHhcccCcEEEEEEec
Q 028410 160 ALFP--S-RFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 160 ~~~~--~-~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+++. . ..+ ++.+.|+|+|.+ +.+..
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~~~vv-VSfp~ 237 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNSPNIV-VTFPT 237 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSCSEEE-EEEEC
T ss_pred HhhhhhhHHHH-HHHHHhCCCCEE-Eeccc
Confidence 8833 2 444 999999999975 44443
No 249
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.87 E-value=3e-09 Score=87.35 Aligned_cols=64 Identities=17% Similarity=0.157 Sum_probs=56.0
Q ss_pred cccCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC-------------cEEEcCCCCCCCCCCceeeEEcc
Q 028410 91 KSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP-------------LVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 91 ~~~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~-------------~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
.....++.+|||||||+|..+..+++.+ .+|+++|+++.++ .++++|+.++++++.+||.|+++
T Consensus 45 ~l~~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~fD~Iv~N 121 (295)
T 3gru_A 45 SANLTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFNKVVAN 121 (295)
T ss_dssp HTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCCSEEEEE
T ss_pred hcCCCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCccEEEEe
Confidence 3356788999999999999999999985 5999999999754 48899999999888899999986
No 250
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.87 E-value=3.3e-09 Score=87.27 Aligned_cols=60 Identities=18% Similarity=0.274 Sum_probs=47.1
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC---------------CcEEEcCCCCCCCCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
...++.+|||+|||+|..+..+++.+ .+|+|+|+++.+ +.++.+|+.+.++ .+||+|+++
T Consensus 39 ~~~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~--~~~D~Vv~n 113 (299)
T 2h1r_A 39 KIKSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF--PKFDVCTAN 113 (299)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC--CCCSEEEEE
T ss_pred CCCCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc--ccCCEEEEc
Confidence 45788999999999999999999975 499999999863 3467888887765 489999996
No 251
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.83 E-value=5.5e-09 Score=90.15 Aligned_cols=89 Identities=16% Similarity=0.198 Sum_probs=65.0
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC---------------CcEEEcCCCC----CCCCCCceeeEE
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL---------------PLVSRADPHN----LPFFDEAFDVAF 153 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~---------------~~~~~~d~~~----~~~~~~~fD~i~ 153 (209)
...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+ +.++++|+.+ +++++++||+|+
T Consensus 283 ~~~~~~~VLDlgcG~G~~~~~la~~~-~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv 361 (433)
T 1uwv_A 283 DVQPEDRVLDLFCGMGNFTLPLATQA-ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVL 361 (433)
T ss_dssp TCCTTCEEEEESCTTTTTHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEE
T ss_pred cCCCCCEEEECCCCCCHHHHHHHhhC-CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEE
Confidence 34678899999999999999999984 599999999863 3488999887 346678999999
Q ss_pred cccchhhhCHHHHHHHHHHhcccCcEEEEEEe
Q 028410 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
++--.... .++++.+. .++|++.+++...
T Consensus 362 ~dPPr~g~--~~~~~~l~-~~~p~~ivyvsc~ 390 (433)
T 1uwv_A 362 LDPARAGA--AGVMQQII-KLEPIRIVYVSCN 390 (433)
T ss_dssp ECCCTTCC--HHHHHHHH-HHCCSEEEEEESC
T ss_pred ECCCCccH--HHHHHHHH-hcCCCeEEEEECC
Confidence 85211111 23444444 3789887666543
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.81 E-value=1.6e-09 Score=86.57 Aligned_cols=67 Identities=19% Similarity=0.278 Sum_probs=51.6
Q ss_pred HHHHhcccCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC-------------CcEEEcCCCCCCCCC-Cceee
Q 028410 86 KHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-------------PLVSRADPHNLPFFD-EAFDV 151 (209)
Q Consensus 86 ~~l~~~~~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~-------------~~~~~~d~~~~~~~~-~~fD~ 151 (209)
..+.......++.+|||+|||+|..+..+++.+ .+|+|+|+++.+ +.++++|+.++++++ ..|+
T Consensus 20 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~~- 97 (244)
T 1qam_A 20 DKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYK- 97 (244)
T ss_dssp HHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCCE-
T ss_pred HHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCeE-
Confidence 333444455788999999999999999999976 599999999753 458899999988764 4564
Q ss_pred EEc
Q 028410 152 AFT 154 (209)
Q Consensus 152 i~~ 154 (209)
|++
T Consensus 98 vv~ 100 (244)
T 1qam_A 98 IFG 100 (244)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 253
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.81 E-value=8.7e-09 Score=88.71 Aligned_cols=87 Identities=18% Similarity=0.225 Sum_probs=65.5
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC--------------CcEEEcCCCCCCCCCCceeeEEcccchh
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL--------------PLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~--------------~~~~~~d~~~~~~~~~~fD~i~~~~~~~ 159 (209)
+.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+ +.++.+|+.++.. + +||+|+++.-..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~-~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~-~-~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRG-FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV-K-GFDTVIVDPPRA 364 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC-T-TCSEEEECCCTT
T ss_pred cCCCCEEEEeeccchHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc-c-CCCEEEEcCCcc
Confidence 3788999999999999999999875 499999999874 4588999988743 2 899999853211
Q ss_pred hhCHHHHHHHHHHhcccCcEEEEEEe
Q 028410 160 ALFPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 160 ~~~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
.....+++.+. .|+|||.+++.+.
T Consensus 365 -g~~~~~~~~l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 365 -GLHPRLVKRLN-REKPGVIVYVSCN 388 (425)
T ss_dssp -CSCHHHHHHHH-HHCCSEEEEEESC
T ss_pred -chHHHHHHHHH-hcCCCcEEEEECC
Confidence 11234555554 5999998777654
No 254
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.77 E-value=4.7e-08 Score=78.88 Aligned_cols=96 Identities=11% Similarity=-0.074 Sum_probs=66.6
Q ss_pred ccCCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCCCCc-------------EEEcCCCCCCCCCCceeeEEcccc
Q 028410 92 SLLFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDSLPL-------------VSRADPHNLPFFDEAFDVAFTAHL 157 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~~~~-------------~~~~d~~~~~~~~~~fD~i~~~~~ 157 (209)
..++++.+|||+|||+|.+++.+++ .+...|+|+|+...+.. ....++....++.+++|+|+|.-.
T Consensus 86 ~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmA 165 (282)
T 3gcz_A 86 GYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIG 165 (282)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCC
T ss_pred cCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCc
Confidence 3678999999999999999999886 56678999999754211 122222223456789999999632
Q ss_pred hh----hhCH---HHHHHHHHHhcccC--cEEEEEEecC
Q 028410 158 AE----ALFP---SRFVGEMERTVKIG--GVCMVLMEEC 187 (209)
Q Consensus 158 ~~----~~~~---~~~l~~~~r~Lkpg--G~lil~~~~~ 187 (209)
.. ..|. ..++.-+.++|||| |.+++=+..+
T Consensus 166 pnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~p 204 (282)
T 3gcz_A 166 ESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCP 204 (282)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCC
T ss_pred cCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecC
Confidence 22 1111 23467778999999 9987766663
No 255
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.77 E-value=1.2e-08 Score=86.85 Aligned_cols=99 Identities=10% Similarity=0.046 Sum_probs=74.3
Q ss_pred HHhcccCCCCCeEEEEcCCCChhHHHHHhcCC---------------------------------------ceEEEecCC
Q 028410 88 LQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGV---------------------------------------ADVTGVELM 128 (209)
Q Consensus 88 l~~~~~~~~~~~iLDiGcG~G~~~~~la~~~~---------------------------------------~~v~~vD~s 128 (209)
+.......++..+||.|||+|.++..++..+. .+|+|+|++
T Consensus 187 ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid 266 (385)
T 3ldu_A 187 LIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDID 266 (385)
T ss_dssp HHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESC
T ss_pred HHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECC
Confidence 34445667889999999999999999876421 379999999
Q ss_pred CCCC----------------cEEEcCCCCCCCCCCceeeEEcccch-----hhhCHHHHHHHHHHhccc--CcEEEEEEe
Q 028410 129 DSLP----------------LVSRADPHNLPFFDEAFDVAFTAHLA-----EALFPSRFVGEMERTVKI--GGVCMVLME 185 (209)
Q Consensus 129 ~~~~----------------~~~~~d~~~~~~~~~~fD~i~~~~~~-----~~~~~~~~l~~~~r~Lkp--gG~lil~~~ 185 (209)
+.++ .+.++|+.+++.+ ++||+|+++--. ..-+...+++++.+.||+ ||.+++++.
T Consensus 267 ~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 267 EESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred HHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 9844 3788999888764 589999997321 111346677888888887 999888877
Q ss_pred cC
Q 028410 186 EC 187 (209)
Q Consensus 186 ~~ 187 (209)
..
T Consensus 346 ~~ 347 (385)
T 3ldu_A 346 YE 347 (385)
T ss_dssp CT
T ss_pred CH
Confidence 53
No 256
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.76 E-value=1.2e-08 Score=87.02 Aligned_cols=98 Identities=12% Similarity=0.030 Sum_probs=72.7
Q ss_pred HhcccCCCCCeEEEEcCCCChhHHHHHhcCC---------------------------------------ceEEEecCCC
Q 028410 89 QGKSLLFNHSKVLCVSAGAGHEVMAFNSIGV---------------------------------------ADVTGVELMD 129 (209)
Q Consensus 89 ~~~~~~~~~~~iLDiGcG~G~~~~~la~~~~---------------------------------------~~v~~vD~s~ 129 (209)
+......++..+||.+||+|.++.+.+..+. .+|+|+|+++
T Consensus 194 l~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~ 273 (393)
T 3k0b_A 194 VLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDA 273 (393)
T ss_dssp HHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCH
T ss_pred HHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCH
Confidence 3344667889999999999999988876321 3599999999
Q ss_pred CCC----------------cEEEcCCCCCCCCCCceeeEEcccc--hh---hhCHHHHHHHHHHhccc--CcEEEEEEec
Q 028410 130 SLP----------------LVSRADPHNLPFFDEAFDVAFTAHL--AE---ALFPSRFVGEMERTVKI--GGVCMVLMEE 186 (209)
Q Consensus 130 ~~~----------------~~~~~d~~~~~~~~~~fD~i~~~~~--~~---~~~~~~~l~~~~r~Lkp--gG~lil~~~~ 186 (209)
.++ .+.++|+.+++.+ .+||+|+++-- .. .-+...+++++.+.||+ ||.+++++..
T Consensus 274 ~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 352 (393)
T 3k0b_A 274 RLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSY 352 (393)
T ss_dssp HHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 743 4889999988764 58999999721 11 11345667777777776 9998888875
Q ss_pred C
Q 028410 187 C 187 (209)
Q Consensus 187 ~ 187 (209)
.
T Consensus 353 ~ 353 (393)
T 3k0b_A 353 E 353 (393)
T ss_dssp T
T ss_pred H
Confidence 4
No 257
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.71 E-value=3e-08 Score=81.87 Aligned_cols=109 Identities=9% Similarity=-0.009 Sum_probs=74.1
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCCC---------------CcEEEcCCCCCCCCC---CceeeE
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSL---------------PLVSRADPHNLPFFD---EAFDVA 152 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~---~~fD~i 152 (209)
...++.+|||+|||+|..+..+++. +.++|+++|+++.+ +.++.+|+.+++... ++||.|
T Consensus 99 ~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~V 178 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYI 178 (309)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEE
Confidence 3478999999999999999999983 45799999999873 347788887765332 579999
Q ss_pred Ecc------cchhh-h-----------C-------HHHHHHHHHHhcccCcEEEEEEecCCcccH-HHHHHHhccc
Q 028410 153 FTA------HLAEA-L-----------F-------PSRFVGEMERTVKIGGVCMVLMEECAGREI-KQIVELFRTS 202 (209)
Q Consensus 153 ~~~------~~~~~-~-----------~-------~~~~l~~~~r~LkpgG~lil~~~~~~~~~~-~~~~~l~~~~ 202 (209)
++. .+... . + ..+++....+.++ ||.++..+......+. ..+.+++++.
T Consensus 179 l~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~~ 253 (309)
T 2b9e_A 179 LLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQN 253 (309)
T ss_dssp EECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTTS
T ss_pred EEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHHhC
Confidence 973 11111 0 1 1346677777776 9998887766544443 3445555543
No 258
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.71 E-value=7.4e-08 Score=70.41 Aligned_cols=61 Identities=15% Similarity=0.018 Sum_probs=51.9
Q ss_pred CCCCeEEEEcCCCC-hhHHHHHh-cCCceEEEecCCCCCCcEEEcCCCCCCCCC-CceeeEEccc
Q 028410 95 FNHSKVLCVSAGAG-HEVMAFNS-IGVADVTGVELMDSLPLVSRADPHNLPFFD-EAFDVAFTAH 156 (209)
Q Consensus 95 ~~~~~iLDiGcG~G-~~~~~la~-~~~~~v~~vD~s~~~~~~~~~d~~~~~~~~-~~fD~i~~~~ 156 (209)
.++.+|||||||+| ..+..|++ .|. +|+++|+++.++++++.|+.+..... ..||+|.+.+
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~~v~dDiF~P~~~~Y~~~DLIYsir 97 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGGIVRDDITSPRMEIYRGAALIYSIR 97 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTTEECCCSSSCCHHHHTTEEEEEEES
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccceEEccCCCCcccccCCcCEEEEcC
Confidence 66789999999999 69999997 776 99999999999999999998854321 4899998844
No 259
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.71 E-value=2.1e-08 Score=85.27 Aligned_cols=98 Identities=13% Similarity=0.112 Sum_probs=73.7
Q ss_pred HhcccCCCCCeEEEEcCCCChhHHHHHhcCC---------------------------------------ceEEEecCCC
Q 028410 89 QGKSLLFNHSKVLCVSAGAGHEVMAFNSIGV---------------------------------------ADVTGVELMD 129 (209)
Q Consensus 89 ~~~~~~~~~~~iLDiGcG~G~~~~~la~~~~---------------------------------------~~v~~vD~s~ 129 (209)
+.....+++..++|.+||+|.++.+.+..+. .+++|+|+++
T Consensus 187 l~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~ 266 (384)
T 3ldg_A 187 ILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDG 266 (384)
T ss_dssp HHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCH
T ss_pred HHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCH
Confidence 3344667889999999999999998876321 3599999999
Q ss_pred CCC----------------cEEEcCCCCCCCCCCceeeEEcccch-----hhhCHHHHHHHHHHhccc--CcEEEEEEec
Q 028410 130 SLP----------------LVSRADPHNLPFFDEAFDVAFTAHLA-----EALFPSRFVGEMERTVKI--GGVCMVLMEE 186 (209)
Q Consensus 130 ~~~----------------~~~~~d~~~~~~~~~~fD~i~~~~~~-----~~~~~~~~l~~~~r~Lkp--gG~lil~~~~ 186 (209)
.++ .+.++|+.+++.+ .+||+|+++--. ..-+...+++++.+.||+ ||.+++++..
T Consensus 267 ~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 345 (384)
T 3ldg_A 267 RMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTND 345 (384)
T ss_dssp HHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESC
T ss_pred HHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECC
Confidence 844 4789999988764 489999997211 111346677778888876 9999888885
Q ss_pred C
Q 028410 187 C 187 (209)
Q Consensus 187 ~ 187 (209)
.
T Consensus 346 ~ 346 (384)
T 3ldg_A 346 T 346 (384)
T ss_dssp T
T ss_pred H
Confidence 4
No 260
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.70 E-value=2.8e-08 Score=85.98 Aligned_cols=110 Identities=15% Similarity=0.099 Sum_probs=76.8
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhc--------------CCceEEEecCCCCC-----------------CcEEEcCCCCC
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSI--------------GVADVTGVELMDSL-----------------PLVSRADPHNL 142 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~--------------~~~~v~~vD~s~~~-----------------~~~~~~d~~~~ 142 (209)
..++.+|+|.|||+|.++..+++. ...+++|+|+++.+ ..+.++|....
T Consensus 169 ~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 169 PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEK 248 (445)
T ss_dssp CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTS
T ss_pred CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCC
Confidence 356789999999999999888763 22489999999862 34677887776
Q ss_pred CCCCCceeeEEcccchhhh---C---------------HHHHHHHHHHhcccCcEEEEEEecC---CcccHHHHHH-Hhc
Q 028410 143 PFFDEAFDVAFTAHLAEAL---F---------------PSRFVGEMERTVKIGGVCMVLMEEC---AGREIKQIVE-LFR 200 (209)
Q Consensus 143 ~~~~~~fD~i~~~~~~~~~---~---------------~~~~l~~~~r~LkpgG~lil~~~~~---~~~~~~~~~~-l~~ 200 (209)
+.. .+||+|+++.-+... + ...+++.+.+.|||||++.+++... .......+.+ +++
T Consensus 249 ~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L~~ 327 (445)
T 2okc_A 249 EPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDNVLFEAGAGETIRKRLLQ 327 (445)
T ss_dssp CCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCSTHHHHHHHHHHH
T ss_pred ccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCcccccCcHHHHHHHHHHh
Confidence 543 489999997322211 1 1478999999999999999988653 2223344555 444
Q ss_pred cccc
Q 028410 201 TSSF 204 (209)
Q Consensus 201 ~~~~ 204 (209)
.+.+
T Consensus 328 ~~~l 331 (445)
T 2okc_A 328 DFNL 331 (445)
T ss_dssp HEEE
T ss_pred cCcE
Confidence 4443
No 261
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.68 E-value=6.1e-08 Score=77.94 Aligned_cols=60 Identities=12% Similarity=0.117 Sum_probs=50.2
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC-------------cEEEcCCCCCCCCC----CceeeEEc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP-------------LVSRADPHNLPFFD----EAFDVAFT 154 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~-------------~~~~~d~~~~~~~~----~~fD~i~~ 154 (209)
...++.+|||+|||+|..+..+++.+ .+|+++|+++.++ .++++|+.++++++ +.|| |++
T Consensus 26 ~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~ 102 (255)
T 3tqs_A 26 HPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPLR-VVG 102 (255)
T ss_dssp CCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCSSCEE-EEE
T ss_pred CCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccCCCeE-EEe
Confidence 56788999999999999999999986 5999999998743 48899999988753 5688 444
No 262
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.67 E-value=2e-08 Score=81.44 Aligned_cols=61 Identities=23% Similarity=0.183 Sum_probs=51.8
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC------------cEEEcCCCCCCCCCC-ceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP------------LVSRADPHNLPFFDE-AFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~------------~~~~~d~~~~~~~~~-~fD~i~~~ 155 (209)
...++ +|||+|||+|..+..+++.+ .+|+++|+++.++ .++++|+.++++++. .+|.|+++
T Consensus 44 ~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~~iv~N 117 (271)
T 3fut_A 44 RPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGSLLVAN 117 (271)
T ss_dssp CCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTEEEEEE
T ss_pred CCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCccEEEec
Confidence 55778 99999999999999999986 5999999999854 478999998887653 68888875
No 263
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.66 E-value=6.1e-08 Score=77.64 Aligned_cols=91 Identities=13% Similarity=0.156 Sum_probs=61.0
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC-----------CcEEEcCCCCCCCCCCceeeEEcccchhhh
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-----------PLVSRADPHNLPFFDEAFDVAFTAHLAEAL 161 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~-----------~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~ 161 (209)
...++.+|||+|||+|..+..+++.+..+|+|+|+++.+ +.++++|+.++++++..-++++..++..+.
T Consensus 28 ~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~vv~NlPy~i 107 (249)
T 3ftd_A 28 NIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKELKVVGNLPYNV 107 (249)
T ss_dssp TCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSSEEEEEECCTTT
T ss_pred CCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCCcEEEEECchhc
Confidence 557889999999999999999999865699999999863 358889999988765321334444444433
Q ss_pred CHHHHHHHHHHhcccCcEEEEEE
Q 028410 162 FPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 162 ~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
...++..+.+....-...++.+
T Consensus 108 -~~~il~~ll~~~~~~~~~~~m~ 129 (249)
T 3ftd_A 108 -ASLIIENTVYNKDCVPLAVFMV 129 (249)
T ss_dssp -HHHHHHHHHHTGGGCSEEEEEE
T ss_pred -cHHHHHHHHhcCCCCceEEEEE
Confidence 2334444444433334444444
No 264
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.66 E-value=2.1e-08 Score=84.16 Aligned_cols=94 Identities=18% Similarity=0.131 Sum_probs=67.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc-----------------------EEEcCCCCCC--C--CCC
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL-----------------------VSRADPHNLP--F--FDE 147 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~-----------------------~~~~d~~~~~--~--~~~ 147 (209)
.++.+||++|||+|..+.++++.+..+|+++|+++.+++ ++.+|+.+.- + .++
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 457899999999999999999876579999999987544 2333333211 1 357
Q ss_pred ceeeEEcccch-------hhhCHHHHHHHH----HHhcccCcEEEEEEecCC
Q 028410 148 AFDVAFTAHLA-------EALFPSRFVGEM----ERTVKIGGVCMVLMEECA 188 (209)
Q Consensus 148 ~fD~i~~~~~~-------~~~~~~~~l~~~----~r~LkpgG~lil~~~~~~ 188 (209)
+||+|++.-.. .++...++++.+ .++|+|||.++.......
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~ 318 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVN 318 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETT
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcc
Confidence 89999996322 112446677776 899999999887766654
No 265
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.65 E-value=2.6e-07 Score=75.03 Aligned_cols=106 Identities=14% Similarity=0.031 Sum_probs=70.2
Q ss_pred ccCCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCCCC-----------c--EEEcCCCCCCCCCCceeeEEcccc
Q 028410 92 SLLFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDSLP-----------L--VSRADPHNLPFFDEAFDVAFTAHL 157 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~~~-----------~--~~~~d~~~~~~~~~~fD~i~~~~~ 157 (209)
..+.++.+|||+||++|.++..+++ .+...|.|+|+...+. + ....++.-..++.+.+|+|+|.-.
T Consensus 77 ~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~A 156 (300)
T 3eld_A 77 GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIG 156 (300)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC
T ss_pred CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCc
Confidence 4668999999999999999999998 4667899999874321 1 122222223455789999999632
Q ss_pred hh----hhCH---HHHHHHHHHhcccC-cEEEEEEecCCcccHHHHHH
Q 028410 158 AE----ALFP---SRFVGEMERTVKIG-GVCMVLMEECAGREIKQIVE 197 (209)
Q Consensus 158 ~~----~~~~---~~~l~~~~r~Lkpg-G~lil~~~~~~~~~~~~~~~ 197 (209)
.. ..|. ..++.-+.++|+|| |.+++=+..+-......+.+
T Consensus 157 PnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~ 204 (300)
T 3eld_A 157 ESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLE 204 (300)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHH
Confidence 22 1111 34467778999999 99877766532334444433
No 266
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.63 E-value=4.8e-07 Score=75.98 Aligned_cols=81 Identities=14% Similarity=-0.020 Sum_probs=66.0
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCC--------CCcEEEcCCCCCCCCCCceeeEEcccchhhhCHH
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS--------LPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPS 164 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~--------~~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~ 164 (209)
.+++++++||+||++|.++..+.+.| +.|++||+.+- .+.++++|+.....+.+.||+|+|.... +|.
T Consensus 208 ~l~~G~~vlDLGAaPGGWT~~l~~rg-~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~---~p~ 283 (375)
T 4auk_A 208 RLANGMWAVDLGACPGGWTYQLVKRN-MWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVE---KPA 283 (375)
T ss_dssp HSCTTCEEEEETCTTCHHHHHHHHTT-CEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSS---CHH
T ss_pred cCCCCCEEEEeCcCCCHHHHHHHHCC-CEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCC---ChH
Confidence 45899999999999999999999987 49999998754 3458899999887777899999995444 476
Q ss_pred HHHHHHHHhcccC
Q 028410 165 RFVGEMERTVKIG 177 (209)
Q Consensus 165 ~~l~~~~r~Lkpg 177 (209)
....-+.+.+..|
T Consensus 284 ~~~~l~~~wl~~~ 296 (375)
T 4auk_A 284 KVAALMAQWLVNG 296 (375)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HhHHHHHHHHhcc
Confidence 7777777766665
No 267
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.60 E-value=1.4e-07 Score=75.01 Aligned_cols=108 Identities=13% Similarity=0.025 Sum_probs=69.2
Q ss_pred ccCCCCCeEEEEcCCCChhHHHHHhc-CC----ceEEEec--CCCCC-----CcEEE---c-CCCCCCCCCCceeeEEcc
Q 028410 92 SLLFNHSKVLCVSAGAGHEVMAFNSI-GV----ADVTGVE--LMDSL-----PLVSR---A-DPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~G~~~~~la~~-~~----~~v~~vD--~s~~~-----~~~~~---~-d~~~~~~~~~~fD~i~~~ 155 (209)
..++++.+|+|+||++|.+++..++. +. +.++|+| +.|.. +.+++ + |+.+++ ...+|+|+|.
T Consensus 69 ~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~~DvVLSD 146 (269)
T 2px2_A 69 RFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKP--SEISDTLLCD 146 (269)
T ss_dssp TSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSC--CCCCSEEEEC
T ss_pred CCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCC--CCCCCEEEeC
Confidence 36799999999999999999999885 22 4566777 33332 13333 5 887743 5689999995
Q ss_pred cchh----hhCH---HHHHHHHHHhcccCc-EEEEEEecCCcccHH----HHHHHhcc
Q 028410 156 HLAE----ALFP---SRFVGEMERTVKIGG-VCMVLMEECAGREIK----QIVELFRT 201 (209)
Q Consensus 156 ~~~~----~~~~---~~~l~~~~r~LkpgG-~lil~~~~~~~~~~~----~~~~l~~~ 201 (209)
-... ..|. ..++.-+.++|+||| .+++=+......++. .+...|+.
T Consensus 147 MAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~lk~~F~~ 204 (269)
T 2px2_A 147 IGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLESLQRRFGG 204 (269)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCC
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHHHHHHcCC
Confidence 2111 1122 125666669999999 766655554334443 44445554
No 268
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.56 E-value=1.8e-07 Score=76.49 Aligned_cols=93 Identities=24% Similarity=0.322 Sum_probs=73.2
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC--------------------cEEEcCCCC-CCCCCCceeeE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP--------------------LVSRADPHN-LPFFDEAFDVA 152 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~--------------------~~~~~d~~~-~~~~~~~fD~i 152 (209)
.+..+||-+|.|.|..+.++.+. +..+|+.+|+++..+ +++.+|... +.-.+++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 67889999999999999999985 567999999998743 267777766 33456889999
Q ss_pred Eccc-----chhhhCHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 153 FTAH-----LAEALFPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 153 ~~~~-----~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
+..- ....+...++++.+++.|+|||.++.-...+
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp 201 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEES
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCc
Confidence 9852 2223355889999999999999987766554
No 269
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.53 E-value=3e-08 Score=83.79 Aligned_cols=84 Identities=14% Similarity=0.141 Sum_probs=60.4
Q ss_pred CCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC---------------cEEEcCCCCCC--CCC-------------
Q 028410 97 HSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP---------------LVSRADPHNLP--FFD------------- 146 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~---------------~~~~~d~~~~~--~~~------------- 146 (209)
+.+|||+|||+|.++..+++. ..+|+|+|+++.++ .++.+|+.+.. +.+
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~ 292 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLK 292 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGG
T ss_pred CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccc
Confidence 578999999999999999985 45999999998744 36777776531 111
Q ss_pred -CceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEEec
Q 028410 147 -EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 147 -~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
.+||+|++..-. ..+..++.+.|+++|.++++...
T Consensus 293 ~~~fD~Vv~dPPr-----~g~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 293 SYQCETIFVDPPR-----SGLDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp GCCEEEEEECCCT-----TCCCHHHHHHHTTSSEEEEEESC
T ss_pred cCCCCEEEECcCc-----cccHHHHHHHHhCCCEEEEEECC
Confidence 379999874211 11345677888899987666543
No 270
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.52 E-value=1.6e-08 Score=86.07 Aligned_cols=87 Identities=14% Similarity=0.087 Sum_probs=66.0
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCCC-----------------CcEEEcCCCCC-C-CCCCceeeEE
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSL-----------------PLVSRADPHNL-P-FFDEAFDVAF 153 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~~-----------------~~~~~~d~~~~-~-~~~~~fD~i~ 153 (209)
+++.+|||++||+|..+..++.. |.++|+++|+++.+ +.++.+|+.+. . ...++||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 46789999999999999999883 54699999999872 44566666442 1 1145799999
Q ss_pred cccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
+.- ...+..++..+.+.|+|||.+++..
T Consensus 131 lDP---~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP---FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC---SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC---CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 854 1234678999999999999876665
No 271
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.50 E-value=2.3e-07 Score=83.21 Aligned_cols=84 Identities=19% Similarity=0.128 Sum_probs=61.5
Q ss_pred CCCeEEEEcCCCChhHHHHHh---cCCc--eEEEecCCCC---------------CCcEEEcCCCCCCCCCCceeeEEcc
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS---IGVA--DVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~---~~~~--~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
....|||+|||+|.+.....+ .+.. +|++||.|+. .+.++++|++++.+| +++|+|++-
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSE 435 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSE 435 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECC
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEE
Confidence 446899999999988544433 2222 7899999876 334899999998875 689999995
Q ss_pred cchhhh---CHHHHHHHHHHhcccCcEE
Q 028410 156 HLAEAL---FPSRFVGEMERTVKIGGVC 180 (209)
Q Consensus 156 ~~~~~~---~~~~~l~~~~r~LkpgG~l 180 (209)
.+...+ ...+++....|.|||||.+
T Consensus 436 wMG~fLl~E~mlevL~Ardr~LKPgGim 463 (637)
T 4gqb_A 436 LLGSFADNELSPECLDGAQHFLKDDGVS 463 (637)
T ss_dssp CCBTTBGGGCHHHHHHHHGGGEEEEEEE
T ss_pred cCcccccccCCHHHHHHHHHhcCCCcEE
Confidence 332222 2346777888999999975
No 272
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.47 E-value=8.8e-07 Score=74.87 Aligned_cols=93 Identities=12% Similarity=0.015 Sum_probs=64.9
Q ss_pred CCeEEEEcCCCChhHHHHHh---------c-------CCceEEEecCCCCCC-------c--------------------
Q 028410 97 HSKVLCVSAGAGHEVMAFNS---------I-------GVADVTGVELMDSLP-------L-------------------- 133 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~---------~-------~~~~v~~vD~s~~~~-------~-------------------- 133 (209)
+.+|+|+|||+|..+..+.. . +.-+|...|+-.+.- .
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 68999999999998888721 0 234677777655431 0
Q ss_pred E---EEcCCCCCCCCCCceeeEEcccchhhh-C--------------------------------------HHHHHHHHH
Q 028410 134 V---SRADPHNLPFFDEAFDVAFTAHLAEAL-F--------------------------------------PSRFVGEME 171 (209)
Q Consensus 134 ~---~~~d~~~~~~~~~~fD~i~~~~~~~~~-~--------------------------------------~~~~l~~~~ 171 (209)
+ +-+.+..-.||+++||+|+++..+|++ + ...+++..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 112223344789999999998777766 2 123578889
Q ss_pred HhcccCcEEEEEEecCCc
Q 028410 172 RTVKIGGVCMVLMEECAG 189 (209)
Q Consensus 172 r~LkpgG~lil~~~~~~~ 189 (209)
+.|+|||++++.+...+.
T Consensus 213 ~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHEEEEEEEEEEEEECCC
T ss_pred HHhCCCCEEEEEEecCCC
Confidence 999999999999877543
No 273
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.46 E-value=1.3e-07 Score=80.19 Aligned_cols=93 Identities=12% Similarity=0.021 Sum_probs=63.7
Q ss_pred CCeEEEEcCCCChhHHHHHhc------------------CCceEEEecCCCCC------------------------CcE
Q 028410 97 HSKVLCVSAGAGHEVMAFNSI------------------GVADVTGVELMDSL------------------------PLV 134 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~~------------------~~~~v~~vD~s~~~------------------------~~~ 134 (209)
..+|+|+|||+|..+..+... +.-+|+..|+-.+- .-+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 689999999999988876542 11256666654221 113
Q ss_pred EEcCCC---CCCCCCCceeeEEcccchhhh-CHH---------------------------------------HHHHHHH
Q 028410 135 SRADPH---NLPFFDEAFDVAFTAHLAEAL-FPS---------------------------------------RFVGEME 171 (209)
Q Consensus 135 ~~~d~~---~~~~~~~~fD~i~~~~~~~~~-~~~---------------------------------------~~l~~~~ 171 (209)
+.+... .-.||+++||+|++++.+|++ +.+ .+|+...
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333 345889999999999777776 221 1255558
Q ss_pred HhcccCcEEEEEEecCCc
Q 028410 172 RTVKIGGVCMVLMEECAG 189 (209)
Q Consensus 172 r~LkpgG~lil~~~~~~~ 189 (209)
+.|+|||++++.+...+.
T Consensus 213 ~eL~pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 213 EELISRGRMLLTFICKED 230 (384)
T ss_dssp HHEEEEEEEEEEEECCCT
T ss_pred HHhccCCeEEEEEecCCC
Confidence 999999999999877544
No 274
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.45 E-value=1.5e-07 Score=83.41 Aligned_cols=106 Identities=13% Similarity=0.048 Sum_probs=73.7
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhc----C---------------CceEEEecCCCCC--------------------CcE
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSI----G---------------VADVTGVELMDSL--------------------PLV 134 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~----~---------------~~~v~~vD~s~~~--------------------~~~ 134 (209)
..++.+|+|.|||+|.+...+++. + ..+++|+|+++.+ ..+
T Consensus 167 p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I 246 (541)
T 2ar0_A 167 PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAI 246 (541)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSE
T ss_pred cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCe
Confidence 356789999999999999887652 1 1379999999862 346
Q ss_pred EEcCCCCCC-CCCCceeeEEcccchhhh---------------CHHHHHHHHHHhcccCcEEEEEEecC---CcccHHHH
Q 028410 135 SRADPHNLP-FFDEAFDVAFTAHLAEAL---------------FPSRFVGEMERTVKIGGVCMVLMEEC---AGREIKQI 195 (209)
Q Consensus 135 ~~~d~~~~~-~~~~~fD~i~~~~~~~~~---------------~~~~~l~~~~r~LkpgG~lil~~~~~---~~~~~~~~ 195 (209)
.++|....+ .+..+||+|+++--+... ....++..+.+.|||||++.+++... .......+
T Consensus 247 ~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~~i 326 (541)
T 2ar0_A 247 RLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDI 326 (541)
T ss_dssp EESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHHHHH
T ss_pred EeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCcceecCcHHHHH
Confidence 677765533 345789999997221111 12478999999999999999998764 22234455
Q ss_pred HHHh
Q 028410 196 VELF 199 (209)
Q Consensus 196 ~~l~ 199 (209)
.+.+
T Consensus 327 R~~L 330 (541)
T 2ar0_A 327 RRDL 330 (541)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5533
No 275
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.44 E-value=5.6e-08 Score=82.42 Aligned_cols=86 Identities=17% Similarity=0.126 Sum_probs=64.2
Q ss_pred CCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC------------------------------cEEEcCCCCCC-
Q 028410 96 NHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP------------------------------LVSRADPHNLP- 143 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~------------------------------~~~~~d~~~~~- 143 (209)
++.+|||+|||+|..+..++.. +..+|+++|+++.++ .++++|+.++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 6889999999999999999984 656899999998733 34455554421
Q ss_pred CCCCceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 144 FFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 144 ~~~~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
...++||+|++... ..+..++..+.+.|||||.+++..
T Consensus 127 ~~~~~fD~I~lDP~---~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPF---GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCS---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCCC---CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 11357999996431 134788999999999999876654
No 276
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.40 E-value=4.1e-07 Score=82.92 Aligned_cols=96 Identities=11% Similarity=0.075 Sum_probs=67.7
Q ss_pred cccCCCCCeEEEEcCCCChhHHHHHhcC-------------------------------------------CceEEEecC
Q 028410 91 KSLLFNHSKVLCVSAGAGHEVMAFNSIG-------------------------------------------VADVTGVEL 127 (209)
Q Consensus 91 ~~~~~~~~~iLDiGcG~G~~~~~la~~~-------------------------------------------~~~v~~vD~ 127 (209)
.....++..++|.+||+|.++...+..+ ..+++|+|+
T Consensus 185 ~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Di 264 (703)
T 3v97_A 185 RSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDS 264 (703)
T ss_dssp HTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEES
T ss_pred hhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEEC
Confidence 3455788999999999999998877531 137999999
Q ss_pred CCCCC----------------cEEEcCCCCCC--CCCCceeeEEcccch-hhh----CHHHH---HHHHHHhcccCcEEE
Q 028410 128 MDSLP----------------LVSRADPHNLP--FFDEAFDVAFTAHLA-EAL----FPSRF---VGEMERTVKIGGVCM 181 (209)
Q Consensus 128 s~~~~----------------~~~~~d~~~~~--~~~~~fD~i~~~~~~-~~~----~~~~~---l~~~~r~LkpgG~li 181 (209)
++.++ .+.++|+.++. ..+++||+|+++--. ..+ +...+ +.++.+.+.|||.++
T Consensus 265 d~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ 344 (703)
T 3v97_A 265 DARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLS 344 (703)
T ss_dssp CHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred CHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEE
Confidence 99854 47899998873 334589999998211 111 22333 445555566899999
Q ss_pred EEEec
Q 028410 182 VLMEE 186 (209)
Q Consensus 182 l~~~~ 186 (209)
++++.
T Consensus 345 ilt~~ 349 (703)
T 3v97_A 345 LFSAS 349 (703)
T ss_dssp EEESC
T ss_pred EEeCC
Confidence 98775
No 277
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.39 E-value=4.1e-08 Score=79.06 Aligned_cols=61 Identities=20% Similarity=0.264 Sum_probs=49.8
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCC-------CC----------------CcEEEcCCCCC-C-CCC--C
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMD-------SL----------------PLVSRADPHNL-P-FFD--E 147 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~-------~~----------------~~~~~~d~~~~-~-~~~--~ 147 (209)
.++.+|||+|||+|..+..++..+ .+|+++|+++ .+ +.++++|+.++ + +++ +
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g-~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLG-LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTT-CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred CCcCeEEEeeCccCHHHHHHHHhC-CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 567899999999999999999986 4999999999 42 45788888763 3 444 7
Q ss_pred ceeeEEccc
Q 028410 148 AFDVAFTAH 156 (209)
Q Consensus 148 ~fD~i~~~~ 156 (209)
+||+|+++.
T Consensus 161 ~fD~V~~dP 169 (258)
T 2r6z_A 161 KPDIVYLDP 169 (258)
T ss_dssp CCSEEEECC
T ss_pred CccEEEECC
Confidence 899999963
No 278
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.39 E-value=3.6e-07 Score=76.81 Aligned_cols=105 Identities=14% Similarity=0.088 Sum_probs=74.3
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC---------------------cEEEcCCCCCC-CCCCce
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP---------------------LVSRADPHNLP-FFDEAF 149 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~---------------------~~~~~d~~~~~-~~~~~f 149 (209)
..+++.+|||++||+|.-+.++++. ..+.|+++|+++..+ .+...|...++ ...++|
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 4588999999999999999999985 335899999997622 23444544432 345789
Q ss_pred eeEEcc----cc-----------hhhh----------CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHH
Q 028410 150 DVAFTA----HL-----------AEAL----------FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVE 197 (209)
Q Consensus 150 D~i~~~----~~-----------~~~~----------~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~ 197 (209)
|.|++. .. .... -..+++....+.|||||+++.++.+....+...+.+
T Consensus 225 D~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~ 297 (359)
T 4fzv_A 225 DRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQ 297 (359)
T ss_dssp EEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHH
T ss_pred CEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHH
Confidence 999973 10 0000 015678889999999999999998876555554443
No 279
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.34 E-value=6.1e-07 Score=72.97 Aligned_cols=54 Identities=15% Similarity=0.079 Sum_probs=44.5
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCC---ceEEEecCCCCCC-----------cEEEcCCCCCCCCC
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGV---ADVTGVELMDSLP-----------LVSRADPHNLPFFD 146 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~---~~v~~vD~s~~~~-----------~~~~~d~~~~~~~~ 146 (209)
...++.+|||+|||+|..+..+++.+. ++|+|+|+++.++ .++++|+.++++++
T Consensus 39 ~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 39 RPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGS 106 (279)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGG
T ss_pred CCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhH
Confidence 567889999999999999999998643 2399999998744 47899999888654
No 280
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.34 E-value=2.1e-07 Score=83.86 Aligned_cols=84 Identities=13% Similarity=0.053 Sum_probs=62.5
Q ss_pred CCeEEEEcCCCChhHHHHHh--c--C----------CceEEEecCCCC---------------CCcEEEcCCCCCCCC--
Q 028410 97 HSKVLCVSAGAGHEVMAFNS--I--G----------VADVTGVELMDS---------------LPLVSRADPHNLPFF-- 145 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~--~--~----------~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~-- 145 (209)
...|||+|||+|.++..... . + ..+|++||.|+. .+.++.+|++++.++
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 56899999999999753221 1 1 239999999874 356899999998764
Q ss_pred ---CCceeeEEcccchhhh---CHHHHHHHHHHhcccCcEE
Q 028410 146 ---DEAFDVAFTAHLAEAL---FPSRFVGEMERTVKIGGVC 180 (209)
Q Consensus 146 ---~~~fD~i~~~~~~~~~---~~~~~l~~~~r~LkpgG~l 180 (209)
.+++|+|++-.+...+ -..+++....+.|||||.+
T Consensus 490 ~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~ 530 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTIS 530 (745)
T ss_dssp HTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEE
T ss_pred cCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEE
Confidence 6899999995443222 2356788888999999974
No 281
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.34 E-value=4.6e-06 Score=67.57 Aligned_cols=97 Identities=19% Similarity=0.091 Sum_probs=67.0
Q ss_pred HHhcccCCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCCC--------------CcEEEc-CCCCCCCCCCceee
Q 028410 88 LQGKSLLFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDSL--------------PLVSRA-DPHNLPFFDEAFDV 151 (209)
Q Consensus 88 l~~~~~~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~~--------------~~~~~~-d~~~~~~~~~~fD~ 151 (209)
+.+...++++..|||+||++|.++.+.+. .|...|+|+|+.... +.+..+ |+..++- ..+|+
T Consensus 86 i~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ 163 (321)
T 3lkz_A 86 LVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--ECCDT 163 (321)
T ss_dssp HHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CCCSE
T ss_pred HHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CCCCE
Confidence 33334678999999999999999998887 577789999998761 124444 6666653 67999
Q ss_pred EEcccchhhh-CH-------HHHHHHHHHhcccC-cEEEEEEecC
Q 028410 152 AFTAHLAEAL-FP-------SRFVGEMERTVKIG-GVCMVLMEEC 187 (209)
Q Consensus 152 i~~~~~~~~~-~~-------~~~l~~~~r~Lkpg-G~lil~~~~~ 187 (209)
|+|.-- +.. ++ .++|.-+.+.|++| |.+++=+-.+
T Consensus 164 ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 164 LLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred EEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 999521 111 22 33566667889998 8755544443
No 282
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.32 E-value=4.6e-07 Score=72.88 Aligned_cols=104 Identities=15% Similarity=0.099 Sum_probs=69.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHh--------cC-----CceEEEecCCCC-------------------------------
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS--------IG-----VADVTGVELMDS------------------------------- 130 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~--------~~-----~~~v~~vD~s~~------------------------------- 130 (209)
++..+|||+|+|+|+.+..+++ .+ ..+++++|..+.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 4668999999999998887654 22 248999998771
Q ss_pred ------------CCcEEEcCCCC-CCCCC----CceeeEEcccchhhhC----HHHHHHHHHHhcccCcEEEEEEecCCc
Q 028410 131 ------------LPLVSRADPHN-LPFFD----EAFDVAFTAHLAEALF----PSRFVGEMERTVKIGGVCMVLMEECAG 189 (209)
Q Consensus 131 ------------~~~~~~~d~~~-~~~~~----~~fD~i~~~~~~~~~~----~~~~l~~~~r~LkpgG~lil~~~~~~~ 189 (209)
.+.++.+|+.+ ++..+ ..||+|+........+ ..+++.++.+.|||||.++ +.+..
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~--tysaa- 215 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLA--TFTSA- 215 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEE--ESCCB-
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEE--EEeCC-
Confidence 11256677655 34222 3799999854322112 3689999999999999955 44332
Q ss_pred ccHHHHHHHhccccc
Q 028410 190 REIKQIVELFRTSSF 204 (209)
Q Consensus 190 ~~~~~~~~l~~~~~~ 204 (209)
..+...+..+||
T Consensus 216 ---~~vrr~L~~aGF 227 (257)
T 2qy6_A 216 ---GFVRRGLQEAGF 227 (257)
T ss_dssp ---HHHHHHHHHHTE
T ss_pred ---HHHHHHHHHCCC
Confidence 245555555565
No 283
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.31 E-value=4.3e-07 Score=72.80 Aligned_cols=62 Identities=13% Similarity=0.035 Sum_probs=45.4
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC-------------cEEEcCCCCCCCCCC-----ceeeEEc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP-------------LVSRADPHNLPFFDE-----AFDVAFT 154 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~-------------~~~~~d~~~~~~~~~-----~fD~i~~ 154 (209)
...++.+|||+|||+|..+. ++..+..+|+++|+++.++ .++++|+.++++++. ..|.|++
T Consensus 18 ~~~~~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~vvs 96 (252)
T 1qyr_A 18 NPQKGQAMVEIGPGLAALTE-PVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFG 96 (252)
T ss_dssp CCCTTCCEEEECCTTTTTHH-HHHTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHTSCEEEEE
T ss_pred CCCCcCEEEEECCCCcHHHH-hhhCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhcccCCceEEEE
Confidence 55788999999999999999 7653222399999998743 478888888776432 3456666
Q ss_pred c
Q 028410 155 A 155 (209)
Q Consensus 155 ~ 155 (209)
+
T Consensus 97 N 97 (252)
T 1qyr_A 97 N 97 (252)
T ss_dssp E
T ss_pred C
Confidence 4
No 284
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.28 E-value=7.7e-06 Score=64.32 Aligned_cols=102 Identities=16% Similarity=0.105 Sum_probs=67.6
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCCC--------------CcEEEc-CCCCCCCCCCceeeEEccc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDSL--------------PLVSRA-DPHNLPFFDEAFDVAFTAH 156 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~~--------------~~~~~~-d~~~~~~~~~~fD~i~~~~ 156 (209)
.++++..|+|+||++|.++.+.+. .+...|+|+|+.... +.|.++ |+..++ ...+|.|+|.-
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~--~~~~DtllcDI 152 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLP--PEKCDTLLCDI 152 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCC--CCCCSEEEECC
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecC--CccccEEEEec
Confidence 668999999999999999998887 577789999988652 236666 765554 36799999951
Q ss_pred chhhhCH-------HHHHHHHHHhcccCcEEEEEEecCCcccHHHHHH
Q 028410 157 LAEALFP-------SRFVGEMERTVKIGGVCMVLMEECAGREIKQIVE 197 (209)
Q Consensus 157 ~~~~~~~-------~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~ 197 (209)
-...-++ .++|.-+.+.|++ |.+++=+-.+...++-+..+
T Consensus 153 geSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~e~l~ 199 (267)
T 3p8z_A 153 GESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVIEHLE 199 (267)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHHHHHH
T ss_pred CCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHHHHHH
Confidence 1111122 3356666788998 66554444433322434443
No 285
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.23 E-value=2.3e-07 Score=74.67 Aligned_cols=84 Identities=17% Similarity=0.118 Sum_probs=57.6
Q ss_pred CCCC--CeEEEEcCCCChhHHHHHhcCCceEEEecCCCC------------------------CCcEEEcCCCC-CCCCC
Q 028410 94 LFNH--SKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS------------------------LPLVSRADPHN-LPFFD 146 (209)
Q Consensus 94 ~~~~--~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~------------------------~~~~~~~d~~~-~~~~~ 146 (209)
++++ .+|||+|||+|..+..++..|. +|+++|+++. .+.++++|..+ ++...
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~ 162 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDIT 162 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCS
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCc
Confidence 3556 8999999999999999999875 8999999983 13477888766 33223
Q ss_pred CceeeEEcccchhhhCHHHHHHHHHHhcccCc
Q 028410 147 EAFDVAFTAHLAEALFPSRFVGEMERTVKIGG 178 (209)
Q Consensus 147 ~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG 178 (209)
++||+|+++....+-.....+++..+.|++.+
T Consensus 163 ~~fDvV~lDP~y~~~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 163 PRPQVVYLDPMFPHKQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp SCCSEEEECCCCCCCCC-----HHHHHHHHHS
T ss_pred ccCCEEEEcCCCCCcccchHHHHHHHHHHHhh
Confidence 47999999754433322345666667776654
No 286
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.21 E-value=3e-06 Score=71.17 Aligned_cols=95 Identities=9% Similarity=-0.026 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-----------------CCceEEEecCCCCCCc----------------EEE---cC
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-----------------GVADVTGVELMDSLPL----------------VSR---AD 138 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-----------------~~~~v~~vD~s~~~~~----------------~~~---~d 138 (209)
.+..+|+|+||++|..+..+... +.-+|+..|+-.+..+ ++. +.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 45689999999999887765432 1236777786555211 222 33
Q ss_pred CCCCCCCCCceeeEEcccchhhh-C-H--------------------------------HHHHHHHHHhcccCcEEEEEE
Q 028410 139 PHNLPFFDEAFDVAFTAHLAEAL-F-P--------------------------------SRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 139 ~~~~~~~~~~fD~i~~~~~~~~~-~-~--------------------------------~~~l~~~~r~LkpgG~lil~~ 184 (209)
+..-.||++++|++++++..|++ + | ..+|+...+.|+|||++++.+
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 44456899999999998776665 2 1 235888899999999999998
Q ss_pred ecCCc
Q 028410 185 EECAG 189 (209)
Q Consensus 185 ~~~~~ 189 (209)
...+.
T Consensus 210 ~gr~~ 214 (359)
T 1m6e_X 210 LGRRS 214 (359)
T ss_dssp EECSS
T ss_pred ecCCC
Confidence 76544
No 287
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.19 E-value=3.2e-07 Score=75.45 Aligned_cols=63 Identities=11% Similarity=0.063 Sum_probs=50.1
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCCCC--------------cEEEcCCCCCC--CC---CCceeeE
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLP--------------LVSRADPHNLP--FF---DEAFDVA 152 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~~~--------------~~~~~d~~~~~--~~---~~~fD~i 152 (209)
..+++.+|||+|||+|..+..+++. +.++|+|+|+|+.++ .++++|+.+++ ++ .++||.|
T Consensus 23 ~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~V 102 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGI 102 (301)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEE
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEE
Confidence 4578899999999999999999985 446999999998754 37788887764 11 2589999
Q ss_pred Ecc
Q 028410 153 FTA 155 (209)
Q Consensus 153 ~~~ 155 (209)
++.
T Consensus 103 l~D 105 (301)
T 1m6y_A 103 LMD 105 (301)
T ss_dssp EEE
T ss_pred EEc
Confidence 874
No 288
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.19 E-value=3.9e-06 Score=74.22 Aligned_cols=108 Identities=18% Similarity=0.118 Sum_probs=75.9
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc----CCceEEEecCCCCCC-----------------cEEEcCCCCC--C-CCCCcee
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI----GVADVTGVELMDSLP-----------------LVSRADPHNL--P-FFDEAFD 150 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~----~~~~v~~vD~s~~~~-----------------~~~~~d~~~~--~-~~~~~fD 150 (209)
.++.+|+|.+||+|.+...+++. +..+++|+|+++.+. .+.++|.... | .+..+||
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD 299 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFD 299 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBS
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccccccccc
Confidence 46789999999999998887763 245899999998622 3678887665 3 4568899
Q ss_pred eEEccc--chh---------------h--h-----CHHHHHHHHHHhcc-cCcEEEEEEecC---CcccHHHHHHHhccc
Q 028410 151 VAFTAH--LAE---------------A--L-----FPSRFVGEMERTVK-IGGVCMVLMEEC---AGREIKQIVELFRTS 202 (209)
Q Consensus 151 ~i~~~~--~~~---------------~--~-----~~~~~l~~~~r~Lk-pgG~lil~~~~~---~~~~~~~~~~l~~~~ 202 (209)
+|+++- ... + + ....++..+.+.|| |||++.++++.. .......+++.+-..
T Consensus 300 ~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~ 379 (542)
T 3lkd_A 300 GVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLEE 379 (542)
T ss_dssp EEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHHT
T ss_pred EEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHhC
Confidence 999971 000 0 1 01358999999999 999999998764 222345566644433
No 289
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.17 E-value=4.3e-06 Score=74.06 Aligned_cols=106 Identities=14% Similarity=0.043 Sum_probs=71.2
Q ss_pred CeEEEEcCCCChhHHHHHhc--------C--------CceEEEecCCCCCCc--------------E--EEcCCCCCC-C
Q 028410 98 SKVLCVSAGAGHEVMAFNSI--------G--------VADVTGVELMDSLPL--------------V--SRADPHNLP-F 144 (209)
Q Consensus 98 ~~iLDiGcG~G~~~~~la~~--------~--------~~~v~~vD~s~~~~~--------------~--~~~d~~~~~-~ 144 (209)
.+|+|.+||+|.+...+++. . ..+++|+|+++.+.. + .++|....+ +
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 39999999999988876541 0 248999999987332 2 556654433 4
Q ss_pred CCCceeeEEcccchhh-------------------------h-----CHHHHHHHHHHhcccCcEEEEEEecC---Cc-c
Q 028410 145 FDEAFDVAFTAHLAEA-------------------------L-----FPSRFVGEMERTVKIGGVCMVLMEEC---AG-R 190 (209)
Q Consensus 145 ~~~~fD~i~~~~~~~~-------------------------~-----~~~~~l~~~~r~LkpgG~lil~~~~~---~~-~ 190 (209)
++.+||+|+++--+.. . ....++..+.+.|||||++.+++... +. .
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~~ 405 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTN 405 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCCGG
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcCcc
Confidence 5689999999711000 1 11368999999999999999998753 22 3
Q ss_pred cHHHHHHHhcccc
Q 028410 191 EIKQIVELFRTSS 203 (209)
Q Consensus 191 ~~~~~~~l~~~~~ 203 (209)
....+++.+-..+
T Consensus 406 ~~~~iRk~Lle~~ 418 (544)
T 3khk_A 406 NEGEIRKTLVEQD 418 (544)
T ss_dssp GHHHHHHHHHHTT
T ss_pred hHHHHHHHHHhCC
Confidence 4556666444333
No 290
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.09 E-value=7.2e-06 Score=63.45 Aligned_cols=82 Identities=12% Similarity=-0.055 Sum_probs=59.2
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCC-------------C-----CcEEEcCCCCC--------------
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-------------L-----PLVSRADPHNL-------------- 142 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~-------------~-----~~~~~~d~~~~-------------- 142 (209)
.+..+|||+|| |+.+..+++...++|+++|.+++ . ++++.+|+...
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred hCCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 46789999998 58888888853479999999986 2 34677886542
Q ss_pred -C--------C-CCCceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEE
Q 028410 143 -P--------F-FDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMV 182 (209)
Q Consensus 143 -~--------~-~~~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil 182 (209)
+ . ..++||+|+...-. ....+....+.|+|||++++
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~k----~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGRF----RVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSSS----HHHHHHHHHHHCSSCEEEEE
T ss_pred HHHHhhhhhccccCCCCCEEEEeCCC----chhHHHHHHHhcCCCeEEEE
Confidence 1 1 23789999985421 23556667799999998744
No 291
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.04 E-value=8.4e-06 Score=74.63 Aligned_cols=110 Identities=15% Similarity=0.120 Sum_probs=72.7
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-C---CceEEEecCCCCCCcE---------------------EEcCCCCC-CCCCCc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-G---VADVTGVELMDSLPLV---------------------SRADPHNL-PFFDEA 148 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~---~~~v~~vD~s~~~~~~---------------------~~~d~~~~-~~~~~~ 148 (209)
.++.+|||.|||+|.++..+++. + ..+++|+|+++.++.. ...|..+. +....+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 46889999999999999998873 2 2479999999874432 11222221 224578
Q ss_pred eeeEEcc--cchhh---------------------------hC-HHHHHHHHHHhcccCcEEEEEEecCC----cccHHH
Q 028410 149 FDVAFTA--HLAEA---------------------------LF-PSRFVGEMERTVKIGGVCMVLMEECA----GREIKQ 194 (209)
Q Consensus 149 fD~i~~~--~~~~~---------------------------~~-~~~~l~~~~r~LkpgG~lil~~~~~~----~~~~~~ 194 (209)
||+|+++ +.... .+ ...++..+.+.|||||++.+++...- ......
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kk 479 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKA 479 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHH
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHH
Confidence 9999997 11100 01 23477889999999999999988742 123455
Q ss_pred HHHH-hccccc
Q 028410 195 IVEL-FRTSSF 204 (209)
Q Consensus 195 ~~~l-~~~~~~ 204 (209)
+.+. ++++.+
T Consensus 480 LRk~LLe~~~I 490 (878)
T 3s1s_A 480 FREFLVGNFGL 490 (878)
T ss_dssp HHHHHTTTTCE
T ss_pred HHHHHHhCCCe
Confidence 6664 444444
No 292
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.95 E-value=1.6e-06 Score=74.02 Aligned_cols=60 Identities=18% Similarity=0.163 Sum_probs=48.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC-----------------CcEEEcCCCCC-CC-CCCceeeEEcc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-----------------PLVSRADPHNL-PF-FDEAFDVAFTA 155 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~-----------------~~~~~~d~~~~-~~-~~~~fD~i~~~ 155 (209)
.++.+|||+|||+|..+..+++.+ .+|+++|+|+.+ +.++++|+.+. +. ++++||+|+++
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~g-~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSKA-SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCCEEEEeCCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 458999999999999999999876 499999999873 34677777763 32 24689999995
No 293
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.92 E-value=2e-05 Score=66.47 Aligned_cols=93 Identities=17% Similarity=0.088 Sum_probs=65.9
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc-----------------------EEEcCCCCC----CCCCC
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL-----------------------VSRADPHNL----PFFDE 147 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~-----------------------~~~~d~~~~----~~~~~ 147 (209)
.++.+||-+|.|.|..+.++.+.+..+|+.+|+++..++ ++.+|..+. .-..+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 457899999999999999999876679999999998554 222222110 01235
Q ss_pred ceeeEEcccch-----------hhhCHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 148 AFDVAFTAHLA-----------EALFPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 148 ~fD~i~~~~~~-----------~~~~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
+||+|+..-.. ..+...++++.+++.|+|||.++.-....
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~ 334 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 334 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 79999985211 12234788899999999999976655443
No 294
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.85 E-value=3.4e-05 Score=62.54 Aligned_cols=118 Identities=13% Similarity=0.176 Sum_probs=72.3
Q ss_pred HHHHHHHHHh-cccCCCCCeEEEEcC------CCChhHHHHHhc-CC-ceEEEecCCCCCC---cEEEcCCCCCCCCCCc
Q 028410 81 YAHFFKHLQG-KSLLFNHSKVLCVSA------GAGHEVMAFNSI-GV-ADVTGVELMDSLP---LVSRADPHNLPFFDEA 148 (209)
Q Consensus 81 ~~~~~~~l~~-~~~~~~~~~iLDiGc------G~G~~~~~la~~-~~-~~v~~vD~s~~~~---~~~~~d~~~~~~~~~~ 148 (209)
+..+...+-. .-....+++|||+|+ -+|. ..++++ +. +.|+++|+++-.. -++++|...... .++
T Consensus 93 ytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~sda~~~IqGD~~~~~~-~~k 169 (344)
T 3r24_A 93 YTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHT-ANK 169 (344)
T ss_dssp HHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGEEE-SSC
T ss_pred HHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCcccccCCCeEEEcccccccc-CCC
Confidence 3444444422 223477899999997 4555 234443 33 4999999987532 368999766443 588
Q ss_pred eeeEEcc---cchhh--------hCH-HHHHHHHHHhcccCcEEEEEEecCC-cccHHHHHHHhcc
Q 028410 149 FDVAFTA---HLAEA--------LFP-SRFVGEMERTVKIGGVCMVLMEECA-GREIKQIVELFRT 201 (209)
Q Consensus 149 fD~i~~~---~~~~~--------~~~-~~~l~~~~r~LkpgG~lil~~~~~~-~~~~~~~~~l~~~ 201 (209)
||+|+|. +...+ ... +.++.-+.++|+|||.+++=+.... ......+.+.|..
T Consensus 170 ~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~~~L~~lrk~F~~ 235 (344)
T 3r24_A 170 WDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSW 235 (344)
T ss_dssp EEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEE
T ss_pred CCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCHHHHHHHHhhCCe
Confidence 9999995 11111 123 4555666789999999887766543 3334444444443
No 295
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.77 E-value=8.4e-05 Score=60.36 Aligned_cols=88 Identities=11% Similarity=-0.022 Sum_probs=63.2
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc------CCceEEEecCCCC--------------------------------------
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI------GVADVTGVELMDS-------------------------------------- 130 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~------~~~~v~~vD~s~~-------------------------------------- 130 (209)
..+..|||+|+..|..+..++.. +.++|+++|..+.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 55789999999999999988762 2568999996432
Q ss_pred -----CCcEEEcCCCC-CC-CCCCceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 131 -----LPLVSRADPHN-LP-FFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 131 -----~~~~~~~d~~~-~~-~~~~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
.+.++.||+.+ ++ +++++||+|+... ..+......+..+.+.|+|||.+++-
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDa-D~y~~~~~~Le~~~p~L~pGGiIv~D 243 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDG-DLYESTWDTLTNLYPKVSVGGYVIVD 243 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECC-CSHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcC-CccccHHHHHHHHHhhcCCCEEEEEc
Confidence 23466777654 33 4467899998853 22223467889999999999985443
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.34 E-value=0.00075 Score=59.50 Aligned_cols=110 Identities=17% Similarity=0.154 Sum_probs=70.5
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc----C----------CceEEEecCCCCCC---------------cEEEcCCCCCCC-
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI----G----------VADVTGVELMDSLP---------------LVSRADPHNLPF- 144 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~----~----------~~~v~~vD~s~~~~---------------~~~~~d~~~~~~- 144 (209)
.++.+|+|-+||+|.+.....+. . ...++|+|+++.+. .+..+|....|.
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~ 295 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLR 295 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGG
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchh
Confidence 56779999999999998776541 1 23699999988632 255666655443
Q ss_pred ---CCCceeeEEcccchh-------------hh---C-HHHHHHHHHHhcc-------cCcEEEEEEecC---CcccHHH
Q 028410 145 ---FDEAFDVAFTAHLAE-------------AL---F-PSRFVGEMERTVK-------IGGVCMVLMEEC---AGREIKQ 194 (209)
Q Consensus 145 ---~~~~fD~i~~~~~~~-------------~~---~-~~~~l~~~~r~Lk-------pgG~lil~~~~~---~~~~~~~ 194 (209)
+..+||+|+++--+. .. + ...++..+.+.|| |||++.++++.. .......
T Consensus 296 ~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~~~ 375 (530)
T 3ufb_A 296 EMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISAR 375 (530)
T ss_dssp GCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTHHHH
T ss_pred hhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccchHHH
Confidence 235799999971110 00 1 1446788888887 699999998863 2222334
Q ss_pred HHH-Hhccccc
Q 028410 195 IVE-LFRTSSF 204 (209)
Q Consensus 195 ~~~-l~~~~~~ 204 (209)
+++ +++++.+
T Consensus 376 iRk~Lle~~~l 386 (530)
T 3ufb_A 376 IKEELLKNFNL 386 (530)
T ss_dssp HHHHHHHHSEE
T ss_pred HHHHHhhcCEE
Confidence 555 4444443
No 297
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.16 E-value=0.00032 Score=71.93 Aligned_cols=90 Identities=26% Similarity=0.231 Sum_probs=45.6
Q ss_pred CCCCeEEEEcCCCChhHHHHHh-cC-----CceEEEecCCCCCCc----------EEEc--CCCCC-CCCCCceeeEEcc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS-IG-----VADVTGVELMDSLPL----------VSRA--DPHNL-PFFDEAFDVAFTA 155 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~-~~-----~~~v~~vD~s~~~~~----------~~~~--d~~~~-~~~~~~fD~i~~~ 155 (209)
.+..+||+||.|+|..+..+.+ .+ ..+++-.|+|+...+ .... |..+. ++...+||+|++.
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~ 1318 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCN 1318 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEc
Confidence 4678999999999977665543 21 347888999977542 1111 33232 3456789999999
Q ss_pred cchhhh-CHHHHHHHHHHhcccCcEEEEEE
Q 028410 156 HLAEAL-FPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 156 ~~~~~~-~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
++.+.. +....+.++++.|||||++++..
T Consensus 1319 ~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1319 CALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp CC--------------------CCEEEEEE
T ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 888766 78889999999999999987754
No 298
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.99 E-value=0.00037 Score=56.83 Aligned_cols=38 Identities=32% Similarity=0.350 Sum_probs=34.3
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL 133 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~ 133 (209)
.++..|||.+||+|..+..+++.|. +++|+|+++.+++
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~ 271 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQ 271 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHH
Confidence 6889999999999999999998875 9999999988655
No 299
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.92 E-value=0.00093 Score=54.02 Aligned_cols=61 Identities=11% Similarity=0.017 Sum_probs=47.3
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC-----------cEEEcCCCCCC-----CCCCceeeEEc
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP-----------LVSRADPHNLP-----FFDEAFDVAFT 154 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~-----------~~~~~d~~~~~-----~~~~~fD~i~~ 154 (209)
.++++..++|.+||.|..+..+++. .++|+|+|.++.++ .++++++.+++ ...+++|.|++
T Consensus 19 ~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~ 95 (285)
T 1wg8_A 19 AVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVDGILA 95 (285)
T ss_dssp TCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEE
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHcCCCCcCEEEe
Confidence 4578899999999999999999997 46999999999754 35666666543 12256888875
No 300
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.78 E-value=0.0031 Score=51.59 Aligned_cols=104 Identities=13% Similarity=0.076 Sum_probs=65.9
Q ss_pred CCCCeEEEEcCCCChhHHHHH----h-cCCc--eEEEecCCCCC-----------------------------CcEEEcC
Q 028410 95 FNHSKVLCVSAGAGHEVMAFN----S-IGVA--DVTGVELMDSL-----------------------------PLVSRAD 138 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la----~-~~~~--~v~~vD~s~~~-----------------------------~~~~~~d 138 (209)
++.-+|||+|=|+|....... + .+.. .++.+|..+-. +.+..+|
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 456789999999998654322 1 2333 45666643210 0144566
Q ss_pred CCC-CC-CCCCceeeEEcccchhhhCH----HHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 139 PHN-LP-FFDEAFDVAFTAHLAEALFP----SRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 139 ~~~-~~-~~~~~fD~i~~~~~~~~~~~----~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
+.+ ++ +++..||+++...+.-..+| .++++.+.+.++|||. +++.+.. ..++.-+..+||
T Consensus 175 a~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~--laTYtaa----g~VRR~L~~aGF 240 (308)
T 3vyw_A 175 ARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGY--WVSYSSS----LSVRKSLLTLGF 240 (308)
T ss_dssp HHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEE--EEESCCC----HHHHHHHHHTTC
T ss_pred HHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcE--EEEEeCc----HHHHHHHHHCCC
Confidence 544 22 34568999998654443455 7899999999999998 5555532 456666777777
No 301
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.89 E-value=0.016 Score=48.76 Aligned_cols=93 Identities=19% Similarity=0.078 Sum_probs=61.2
Q ss_pred cccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcE------EEcCCCCCCC---------CCCceeeEE
Q 028410 91 KSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLV------SRADPHNLPF---------FDEAFDVAF 153 (209)
Q Consensus 91 ~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~------~~~d~~~~~~---------~~~~fD~i~ 153 (209)
...++++.+||-+|+|. |..+..+++ .|..+|+++|.+++..++ ...|..+..+ ....+|+|+
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvi 259 (398)
T 2dph_A 180 SAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGV 259 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEE
Confidence 34678999999999876 777778877 576689999988763321 1122222111 123699998
Q ss_pred cccchh---------hhCHHHHHHHHHHhcccCcEEEEE
Q 028410 154 TAHLAE---------ALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 154 ~~~~~~---------~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
...-.. +..+...+.+..+.|+|||+++++
T Consensus 260 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 260 DAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp ECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred ECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 742211 112345788999999999997654
No 302
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.70 E-value=0.011 Score=49.22 Aligned_cols=92 Identities=14% Similarity=0.120 Sum_probs=60.5
Q ss_pred HHhcccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCC-------CCCCceee
Q 028410 88 LQGKSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLP-------FFDEAFDV 151 (209)
Q Consensus 88 l~~~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~-------~~~~~fD~ 151 (209)
+.....++++.+||-+|+|. |..+..+++ .|..+|+++|.+++..++ ...|..+.. ..++.+|+
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 182 CINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp HHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEE
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcE
Confidence 33445678999999999876 777777777 576579999988764331 111221111 11236999
Q ss_pred EEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 152 i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
|+...- ....+.+..+.|+|||+++++-
T Consensus 262 vid~~g-----~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 262 ALESTG-----SPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EEECSC-----CHHHHHHHHHTEEEEEEEEECC
T ss_pred EEECCC-----CHHHHHHHHHHHhcCCEEEEeC
Confidence 986321 2356788999999999987653
No 303
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.63 E-value=0.014 Score=46.42 Aligned_cols=38 Identities=16% Similarity=0.234 Sum_probs=33.4
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP 132 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~ 132 (209)
..++..|||..||+|..+.+..+.|. +++|+|+++..+
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~ 247 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYV 247 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHH
Confidence 37899999999999999999988874 999999987643
No 304
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.59 E-value=0.0076 Score=48.70 Aligned_cols=108 Identities=15% Similarity=-0.026 Sum_probs=75.8
Q ss_pred CCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc-------------EEEcCCCC-CC---CCCCceeeEEcccch
Q 028410 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL-------------VSRADPHN-LP---FFDEAFDVAFTAHLA 158 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~-------------~~~~d~~~-~~---~~~~~fD~i~~~~~~ 158 (209)
++..+||+=+|||..+.++...+ .+++.+|.++.... ++..|... +. -+..+||+|+..--.
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~~-d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRSQ-DRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCTT-SEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred cCCCceeEeCCcHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 35678999999999999988854 69999999887443 44445322 11 134579999996433
Q ss_pred hh-hCHHHHHHHHHH--hcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 159 EA-LFPSRFVGEMER--TVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 159 ~~-~~~~~~l~~~~r--~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
+. -+..+++..+.+ .+.|+|.+++=....+....+.+.+-+++.++
T Consensus 170 e~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l~~~~~ 218 (283)
T 2oo3_A 170 ERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS 218 (283)
T ss_dssp CSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHHHHHHHCS
T ss_pred CCCcHHHHHHHHHHHhCccCCCeEEEEEEeccchHHHHHHHHHHHhcCC
Confidence 32 134566666655 45689998888888887778888877766655
No 305
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=94.90 E-value=0.046 Score=44.00 Aligned_cols=88 Identities=15% Similarity=0.038 Sum_probs=51.0
Q ss_pred ceEEEecCCCCCCcEEEcCCCCCCCCCCceeeEEcc----cchhh----hC----HHHHHHHHHHhcccCcEEEEEEecC
Q 028410 120 ADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTA----HLAEA----LF----PSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 120 ~~v~~vD~s~~~~~~~~~d~~~~~~~~~~fD~i~~~----~~~~~----~~----~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
.+|+-+++.+.+.-...+|+...+. .+++|+|+++ ...++ .| ..-++....++|+|||.++.-+...
T Consensus 179 k~v~wi~Pi~GAt~~~~lDfg~p~~-~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygg 257 (320)
T 2hwk_A 179 KMVDWLSDRPEATFRARLDLGIPGD-VPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGY 257 (320)
T ss_dssp SEEEEEESSTTCSEECCGGGCSCTT-SCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCC
T ss_pred ceeEeeccCCCceeecccccCCccc-cCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecC
Confidence 3555555544433333666665443 3779999995 11111 11 1235677789999999988877765
Q ss_pred C-cccHHHHHHHhccccccccc
Q 028410 188 A-GREIKQIVELFRTSSFTEAV 208 (209)
Q Consensus 188 ~-~~~~~~~~~l~~~~~~~~~~ 208 (209)
+ ..+...+..+-++...++.+
T Consensus 258 aDr~se~lv~~LaR~F~~Vr~v 279 (320)
T 2hwk_A 258 ADRASESIIGAIARQFKFSRVC 279 (320)
T ss_dssp CSHHHHHHHHHHHTTEEEEEEE
T ss_pred CcccHHHHHHHHHHhcceeeee
Confidence 4 23444455555555555544
No 306
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.87 E-value=0.023 Score=47.80 Aligned_cols=92 Identities=20% Similarity=0.105 Sum_probs=61.2
Q ss_pred ccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcE------EEcCCCCCC---------CCCCceeeEEc
Q 028410 92 SLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLV------SRADPHNLP---------FFDEAFDVAFT 154 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~------~~~d~~~~~---------~~~~~fD~i~~ 154 (209)
..++++.+||-+|+|. |..+..+++ .|..+|+++|.+++..++ ...|..+.. .....+|+|+.
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvid 260 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVD 260 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEEE
Confidence 4568999999999875 677777777 576689999998763321 112222211 01236999987
Q ss_pred ccc----------hhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 155 AHL----------AEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 155 ~~~----------~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
..- .++.++...+.+..+.|++||+++++
T Consensus 261 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 261 AVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp CCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 421 12224566889999999999997665
No 307
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.81 E-value=0.031 Score=46.64 Aligned_cols=90 Identities=19% Similarity=0.177 Sum_probs=59.7
Q ss_pred hcccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCC----------CCCCcee
Q 028410 90 GKSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLP----------FFDEAFD 150 (209)
Q Consensus 90 ~~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~----------~~~~~fD 150 (209)
....++++.+||-+|+|. |..+..+++ .|..+|+++|.+++..++ ...|..+.. ..++.+|
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~D 255 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVD 255 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCC
Confidence 344678999999999864 666667776 576699999988763321 112222111 2234799
Q ss_pred eEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 151 VAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 151 ~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
+|+...- ....+.+..+.|++||+++++-
T Consensus 256 vvid~~G-----~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 256 VVIECAG-----VAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp EEEECSC-----CHHHHHHHHHHEEEEEEEEECS
T ss_pred EEEECCC-----CHHHHHHHHHHhccCCEEEEEe
Confidence 9986321 2356788999999999987653
No 308
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.63 E-value=0.051 Score=44.74 Aligned_cols=83 Identities=13% Similarity=0.149 Sum_probs=56.7
Q ss_pred cCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCc--------EEEcCCCCCCCCCCceeeEEcccchhhhC
Q 028410 93 LLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPL--------VSRADPHNLPFFDEAFDVAFTAHLAEALF 162 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~--------~~~~d~~~~~~~~~~fD~i~~~~~~~~~~ 162 (209)
.++++.+||-+|+|. |..+..+++ .|. +|+++|.+++..+ ....+...+ .+.+|+|+...-.
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~---~~~~D~vid~~g~---- 244 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFYTDPKQC---KEELDFIISTIPT---- 244 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEESSGGGC---CSCEEEEEECCCS----
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeecCCHHHH---hcCCCEEEECCCc----
Confidence 668999999999875 667777777 576 9999999987554 111222111 2279999863211
Q ss_pred HHHHHHHHHHhcccCcEEEEEE
Q 028410 163 PSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 163 ~~~~l~~~~r~LkpgG~lil~~ 184 (209)
...+....+.|+|||+++++-
T Consensus 245 -~~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 245 -HYDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp -CCCHHHHHTTEEEEEEEEECC
T ss_pred -HHHHHHHHHHHhcCCEEEEEC
Confidence 124677889999999987763
No 309
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.55 E-value=0.015 Score=48.28 Aligned_cols=89 Identities=15% Similarity=0.089 Sum_probs=57.4
Q ss_pred cccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCC--C-CC-------CCCCceee
Q 028410 91 KSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPH--N-LP-------FFDEAFDV 151 (209)
Q Consensus 91 ~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~--~-~~-------~~~~~fD~ 151 (209)
...++++.+||-+|+|. |..+..+++ .|..+|+++|.++...++ ...|.. + .. ...+.+|+
T Consensus 166 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~ 245 (356)
T 1pl8_A 166 RGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEV 245 (356)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCE
Confidence 34568999999999875 677777777 576689999988763321 111211 0 00 00146888
Q ss_pred EEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 152 i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
|+...- ....+.+..+.|+|||+++.+-
T Consensus 246 vid~~g-----~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 246 TIECTG-----AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp EEECSC-----CHHHHHHHHHHSCTTCEEEECS
T ss_pred EEECCC-----ChHHHHHHHHHhcCCCEEEEEe
Confidence 876321 1345778899999999987653
No 310
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.48 E-value=0.19 Score=40.89 Aligned_cols=105 Identities=11% Similarity=0.130 Sum_probs=69.3
Q ss_pred CeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc---------EEEcCCCCCCCC-CCceeeEEcc------cch---
Q 028410 98 SKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL---------VSRADPHNLPFF-DEAFDVAFTA------HLA--- 158 (209)
Q Consensus 98 ~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~---------~~~~d~~~~~~~-~~~fD~i~~~------~~~--- 158 (209)
++|+|+-||.|.+...+.+.|+.-+.++|+++.+.+ ++.+|+.++... -..+|+++.. ...
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag~~ 80 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGGSL 80 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETTEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCCCc
Confidence 479999999999999888888878889999998654 678888886532 2468999874 011
Q ss_pred hhh-CHH-HHHH---HHHHhcccCcEEEEEEecCC------cccHHHHHHHhccccc
Q 028410 159 EAL-FPS-RFVG---EMERTVKIGGVCMVLMEECA------GREIKQIVELFRTSSF 204 (209)
Q Consensus 159 ~~~-~~~-~~l~---~~~r~LkpgG~lil~~~~~~------~~~~~~~~~l~~~~~~ 204 (209)
... |+. .++. ++.+.+||.-. +..+..+ ...+..+.+.|...|+
T Consensus 81 ~g~~d~R~~L~~~~~r~i~~~~Pk~~--~~ENV~gl~~~~~~~~~~~i~~~l~~~GY 135 (331)
T 3ubt_Y 81 RGIDDPRGKLFYEYIRILKQKKPIFF--LAENVKGMMAQRHNKAVQEFIQEFDNAGY 135 (331)
T ss_dssp CCTTCGGGHHHHHHHHHHHHHCCSEE--EEEECCGGGGCTTSHHHHHHHHHHHHHTE
T ss_pred cCCCCchhHHHHHHHHHHhccCCeEE--EeeeecccccccccchhhhhhhhhccCCc
Confidence 111 332 3333 45556788643 4444432 3456667777776665
No 311
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.42 E-value=0.11 Score=42.64 Aligned_cols=106 Identities=12% Similarity=0.011 Sum_probs=66.9
Q ss_pred CCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc--------EEEcCCCCCCCC-CCceeeEEcc---------cch
Q 028410 97 HSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL--------VSRADPHNLPFF-DEAFDVAFTA---------HLA 158 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~--------~~~~d~~~~~~~-~~~fD~i~~~---------~~~ 158 (209)
+.+++|+.||.|..+..+.+.|...+.++|+++.+.+ ...+|+.++... -..+|+++.. .--
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~ag~~ 90 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAGFPCQAFSISGKQ 90 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCCBSCGGGSCGGGSCCCSEEEEECCCTTTCTTSCC
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCCcCCHHHcCHhhCCCCCEEEECCCCCCcchhccc
Confidence 5799999999999999998888878999999987433 225677665321 1358999975 000
Q ss_pred hhh-CH----HHHHHHHHHhcccCcEEEEEEecCCc------ccHHHHHHHhccccc
Q 028410 159 EAL-FP----SRFVGEMERTVKIGGVCMVLMEECAG------REIKQIVELFRTSSF 204 (209)
Q Consensus 159 ~~~-~~----~~~l~~~~r~LkpgG~lil~~~~~~~------~~~~~~~~l~~~~~~ 204 (209)
... |+ -.-+.++.+.+||.-. +..+..+- ..+..+.+.|+..|+
T Consensus 91 ~g~~d~r~~L~~~~~r~i~~~~P~~~--~~ENV~gl~~~~~~~~~~~i~~~l~~~GY 145 (327)
T 2c7p_A 91 KGFEDSRGTLFFDIARIVREKKPKVV--FMENVKNFASHDNGNTLEVVKNTMNELDY 145 (327)
T ss_dssp CGGGSTTSCHHHHHHHHHHHHCCSEE--EEEEEGGGGTGGGGHHHHHHHHHHHHTTB
T ss_pred CCCcchhhHHHHHHHHHHHhccCcEE--EEeCcHHHHhccccHHHHHHHHHHHhCCC
Confidence 011 22 2233445556788644 44444321 245667777776665
No 312
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.42 E-value=0.027 Score=46.69 Aligned_cols=106 Identities=9% Similarity=0.081 Sum_probs=65.9
Q ss_pred CCeEEEEcCCCChhHHHHHhcC--CceEEEecCCCCCC----------cEEEcCCCCCCC---CCCceeeEEcccc----
Q 028410 97 HSKVLCVSAGAGHEVMAFNSIG--VADVTGVELMDSLP----------LVSRADPHNLPF---FDEAFDVAFTAHL---- 157 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~~~--~~~v~~vD~s~~~~----------~~~~~d~~~~~~---~~~~fD~i~~~~~---- 157 (209)
..+++|+.||.|.++..+.+.| ...|.++|+++.++ .++.+|+.++.. +...+|+++...-
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~f 81 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPF 81 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC----
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcch
Confidence 4689999999999999998877 45799999998733 356788877642 1126899998511
Q ss_pred --h---hhh-CHH-HHHHHHHHhc---c--cCcEEEEEEecCC---cccHHHHHHHhccccc
Q 028410 158 --A---EAL-FPS-RFVGEMERTV---K--IGGVCMVLMEECA---GREIKQIVELFRTSSF 204 (209)
Q Consensus 158 --~---~~~-~~~-~~l~~~~r~L---k--pgG~lil~~~~~~---~~~~~~~~~l~~~~~~ 204 (209)
. ... |+. .++.++.+++ + |. +++..+..+ ...+..+.+.|...|+
T Consensus 82 S~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~--~~~~ENV~~l~~~~~~~~i~~~l~~~GY 141 (343)
T 1g55_A 82 TRIGRQGDMTDSRTNSFLHILDILPRLQKLPK--YILLENVKGFEVSSTRDLLIQTIENCGF 141 (343)
T ss_dssp --------------CHHHHHHHHGGGCSSCCS--EEEEEEETTGGGSHHHHHHHHHHHHTTE
T ss_pred hhcCCcCCccCccchHHHHHHHHHHHhcCCCC--EEEEeCCccccCHHHHHHHHHHHHHCCC
Confidence 0 111 222 2455555554 4 54 334444432 3356667777776665
No 313
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.21 E-value=0.087 Score=42.66 Aligned_cols=84 Identities=18% Similarity=0.175 Sum_probs=55.2
Q ss_pred hcccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCc--------EEEcCCCCCCCCCCceeeEEcccchh
Q 028410 90 GKSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPL--------VSRADPHNLPFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 90 ~~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~--------~~~~d~~~~~~~~~~fD~i~~~~~~~ 159 (209)
....++++.+||-+|+|. |..+..+++ .|. +|++++ +++..+ ...-|.+++ .+.+|+++...-.
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v---~~g~Dvv~d~~g~- 209 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYREPSQV---TQKYFAIFDAVNS- 209 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEESSGGGC---CSCEEEEECC----
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEcCHHHh---CCCccEEEECCCc-
Confidence 556678999999999953 667777777 576 999999 877543 111131122 5679999863211
Q ss_pred hhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 160 ALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 160 ~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
..+.+..+.|+|||+++.+.
T Consensus 210 -----~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 210 -----QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp ---------TTGGGEEEEEEEEEEC
T ss_pred -----hhHHHHHHHhcCCCEEEEEe
Confidence 12356789999999987773
No 314
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.10 E-value=0.059 Score=44.82 Aligned_cols=91 Identities=14% Similarity=0.146 Sum_probs=58.8
Q ss_pred HHhcccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCC--CC-------CCCCce
Q 028410 88 LQGKSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHN--LP-------FFDEAF 149 (209)
Q Consensus 88 l~~~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~--~~-------~~~~~f 149 (209)
+.....++++.+||-+|+|. |..+..+++ .|..+|+++|.+++..+. ...|..+ .. ..++.+
T Consensus 184 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 184 AVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGV 263 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCC
Confidence 33445678899999999764 566666776 575589999998874431 1122221 01 112368
Q ss_pred eeEEcccchhhhCHHHHHHHHHHhcccC-cEEEEE
Q 028410 150 DVAFTAHLAEALFPSRFVGEMERTVKIG-GVCMVL 183 (209)
Q Consensus 150 D~i~~~~~~~~~~~~~~l~~~~r~Lkpg-G~lil~ 183 (209)
|+++...- ....+....+.|+|| |+++++
T Consensus 264 D~vid~~g-----~~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 264 DFSLECVG-----NVGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp SEEEECSC-----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCC-----CHHHHHHHHHHhhcCCcEEEEE
Confidence 88876321 134578889999999 997765
No 315
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.08 E-value=0.15 Score=42.37 Aligned_cols=92 Identities=15% Similarity=0.203 Sum_probs=60.1
Q ss_pred HHhcccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCC--CCC-------CCCCce
Q 028410 88 LQGKSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPH--NLP-------FFDEAF 149 (209)
Q Consensus 88 l~~~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~--~~~-------~~~~~f 149 (209)
+.....++++.+||-+|+|. |..+..+++ .|..+|+++|.+++..++ ...|.. +.. ..++.+
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCC
Confidence 34455678999999999863 666666776 476689999999874431 112221 111 112368
Q ss_pred eeEEcccchhhhCHHHHHHHHHHhcccC-cEEEEEE
Q 028410 150 DVAFTAHLAEALFPSRFVGEMERTVKIG-GVCMVLM 184 (209)
Q Consensus 150 D~i~~~~~~~~~~~~~~l~~~~r~Lkpg-G~lil~~ 184 (209)
|+++...- ....+....+.|++| |+++++-
T Consensus 265 D~vid~~g-----~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 265 DYSFECIG-----NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp SEEEECSC-----CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CEEEECCC-----CHHHHHHHHHHhhccCCEEEEEc
Confidence 98876321 234678899999997 9977653
No 316
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.02 E-value=0.14 Score=41.91 Aligned_cols=91 Identities=13% Similarity=0.082 Sum_probs=58.7
Q ss_pred HHHhcccCCCCCeEEEEcCC--CChhHHHHHh-cCCceEEEecCCCCCCcEE-------EcCCCCCC--------CCCCc
Q 028410 87 HLQGKSLLFNHSKVLCVSAG--AGHEVMAFNS-IGVADVTGVELMDSLPLVS-------RADPHNLP--------FFDEA 148 (209)
Q Consensus 87 ~l~~~~~~~~~~~iLDiGcG--~G~~~~~la~-~~~~~v~~vD~s~~~~~~~-------~~d~~~~~--------~~~~~ 148 (209)
.+.....++++.+||-+|+| .|..+..+++ .|. +|+++|.+++..+.. ..|..+.. .....
T Consensus 135 ~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 135 TCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSC
T ss_pred HHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCC
Confidence 34455677899999999987 4667777776 576 999999988754411 11222211 12347
Q ss_pred eeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 149 FDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 149 fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
+|+++.+.-.. ...+..+.|+|||+++.+-
T Consensus 214 ~Dvvid~~g~~------~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 214 ADAAIDSIGGP------DGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEEESSCHH------HHHHHHHTEEEEEEEEECC
T ss_pred CcEEEECCCCh------hHHHHHHHhcCCCEEEEEe
Confidence 99998742211 1234458999999987664
No 317
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.00 E-value=0.066 Score=43.94 Aligned_cols=73 Identities=16% Similarity=0.253 Sum_probs=48.8
Q ss_pred CcEEEcCCCC-CC-CCCCceeeEEccc---ch-----------hhh-CHHHHHHHHHHhcccCcEEEEEEecC--C----
Q 028410 132 PLVSRADPHN-LP-FFDEAFDVAFTAH---LA-----------EAL-FPSRFVGEMERTVKIGGVCMVLMEEC--A---- 188 (209)
Q Consensus 132 ~~~~~~d~~~-~~-~~~~~fD~i~~~~---~~-----------~~~-~~~~~l~~~~r~LkpgG~lil~~~~~--~---- 188 (209)
..++++|..+ +. +++++||+|+++- .. .+. .....+.++.++|||||.+++.+... .
T Consensus 15 ~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~ 94 (323)
T 1boo_A 15 GSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPA 94 (323)
T ss_dssp EEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEE
T ss_pred ceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCcc
Confidence 3466777654 32 5678899999861 11 122 35788899999999999998887654 1
Q ss_pred --cccHHHHHHHhccccc
Q 028410 189 --GREIKQIVELFRTSSF 204 (209)
Q Consensus 189 --~~~~~~~~~l~~~~~~ 204 (209)
....+.+.++++..||
T Consensus 95 ~~~~~~~~i~~~~~~~Gf 112 (323)
T 1boo_A 95 RSIYNFRVLIRMIDEVGF 112 (323)
T ss_dssp ECCHHHHHHHHHHHTTCC
T ss_pred cccchHHHHHHHHHhCCC
Confidence 1235566666776665
No 318
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.89 E-value=0.07 Score=44.38 Aligned_cols=91 Identities=15% Similarity=0.179 Sum_probs=58.6
Q ss_pred HHhcccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcEE-------EcCCCC--CC-------CCCCce
Q 028410 88 LQGKSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLVS-------RADPHN--LP-------FFDEAF 149 (209)
Q Consensus 88 l~~~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~~-------~~d~~~--~~-------~~~~~f 149 (209)
+.....++++.+||-+|+|. |..+..+++ .|..+|+++|.+++..+.. ..|..+ .. ..++.+
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCC
Confidence 33445678999999999764 566666666 5755899999888744311 122221 00 112368
Q ss_pred eeEEcccchhhhCHHHHHHHHHHhcccC-cEEEEE
Q 028410 150 DVAFTAHLAEALFPSRFVGEMERTVKIG-GVCMVL 183 (209)
Q Consensus 150 D~i~~~~~~~~~~~~~~l~~~~r~Lkpg-G~lil~ 183 (209)
|+|+...- ....+.+..+.|++| |+++++
T Consensus 263 D~vid~~g-----~~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 263 DFSFEVIG-----RLDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp SEEEECSC-----CHHHHHHHHHHBCTTTCEEEEC
T ss_pred cEEEECCC-----CHHHHHHHHHHhhcCCcEEEEe
Confidence 88876321 134578889999999 997665
No 319
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.83 E-value=0.062 Score=44.68 Aligned_cols=92 Identities=16% Similarity=0.133 Sum_probs=59.3
Q ss_pred HHhcccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCC--CC-------CCCCce
Q 028410 88 LQGKSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHN--LP-------FFDEAF 149 (209)
Q Consensus 88 l~~~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~--~~-------~~~~~f 149 (209)
+.....++++.+||-+|+|. |..+..+++ .|..+|+++|.+++..++ ...|..+ .. ..++.+
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 183 AVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGV 262 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCC
Confidence 33445678999999999864 566666676 476589999988874431 1112211 00 112368
Q ss_pred eeEEcccchhhhCHHHHHHHHHHhcccC-cEEEEEE
Q 028410 150 DVAFTAHLAEALFPSRFVGEMERTVKIG-GVCMVLM 184 (209)
Q Consensus 150 D~i~~~~~~~~~~~~~~l~~~~r~Lkpg-G~lil~~ 184 (209)
|+|+...- ....+.+..+.|++| |+++++-
T Consensus 263 Dvvid~~g-----~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 263 DYAVECAG-----RIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp SEEEECSC-----CHHHHHHHHHTBCTTTCEEEECC
T ss_pred CEEEECCC-----CHHHHHHHHHHHhcCCCEEEEEc
Confidence 98876321 134578889999999 9977653
No 320
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.78 E-value=0.034 Score=45.66 Aligned_cols=87 Identities=13% Similarity=0.134 Sum_probs=58.3
Q ss_pred cccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCCC------CCCceeeEEcc
Q 028410 91 KSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLPF------FDEAFDVAFTA 155 (209)
Q Consensus 91 ~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~~------~~~~fD~i~~~ 155 (209)
...++++.+||-.|+|. |..+..+++ .|. +|+++|.+++..+. ...|..+..+ ..+.+|+++..
T Consensus 161 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~ 239 (340)
T 3s2e_A 161 VTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVT 239 (340)
T ss_dssp TTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEES
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEe
Confidence 44678999999999875 788888887 576 99999998764331 1112222111 01357888753
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
.. ....+....+.|+|||+++++
T Consensus 240 ~g-----~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 240 AV-----SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp SC-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred CC-----CHHHHHHHHHHhccCCEEEEe
Confidence 21 245678899999999998765
No 321
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.75 E-value=0.074 Score=44.28 Aligned_cols=91 Identities=12% Similarity=0.187 Sum_probs=58.6
Q ss_pred HHhcccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcEE-------EcCCCC--CC-------CCCCce
Q 028410 88 LQGKSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLVS-------RADPHN--LP-------FFDEAF 149 (209)
Q Consensus 88 l~~~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~~-------~~d~~~--~~-------~~~~~f 149 (209)
+.....++++.+||-+|+|. |..+..+++ .|..+|+++|.+++..++. ..|..+ .. ..++.+
T Consensus 187 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 187 AINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp HHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCc
Confidence 33445678999999999763 566666666 5765899999988744321 112221 00 012368
Q ss_pred eeEEcccchhhhCHHHHHHHHHHhcccC-cEEEEE
Q 028410 150 DVAFTAHLAEALFPSRFVGEMERTVKIG-GVCMVL 183 (209)
Q Consensus 150 D~i~~~~~~~~~~~~~~l~~~~r~Lkpg-G~lil~ 183 (209)
|+|+...- ....+.+..+.|++| |+++++
T Consensus 267 Dvvid~~G-----~~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 267 DYSLDCAG-----TAQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SEEEESSC-----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred cEEEECCC-----CHHHHHHHHHHhhcCCCEEEEE
Confidence 88876321 134678899999999 997765
No 322
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.67 E-value=0.036 Score=45.79 Aligned_cols=89 Identities=12% Similarity=0.001 Sum_probs=58.3
Q ss_pred hcccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCC--------CCCCceeeE
Q 028410 90 GKSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLP--------FFDEAFDVA 152 (209)
Q Consensus 90 ~~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~~~~~fD~i 152 (209)
....++++.+||-+|+|. |..+..+++ .|..+|+++|.+++..+. ...|..+.. .....+|++
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v 239 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKV 239 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEE
Confidence 345678999999999875 666777777 476689999988763321 111221111 123469999
Q ss_pred EcccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 153 FTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
+...- ....+.+..+.|+|||+++.+
T Consensus 240 ~d~~g-----~~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 240 VIAGG-----DVHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp EECSS-----CTTHHHHHHHHEEEEEEEEEC
T ss_pred EECCC-----ChHHHHHHHHHHhcCCEEEEe
Confidence 86321 124578889999999998765
No 323
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=93.61 E-value=0.038 Score=46.45 Aligned_cols=58 Identities=19% Similarity=0.117 Sum_probs=46.7
Q ss_pred CeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC----------cEEEcCCCCCCC--------CCCceeeEEcc
Q 028410 98 SKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP----------LVSRADPHNLPF--------FDEAFDVAFTA 155 (209)
Q Consensus 98 ~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~----------~~~~~d~~~~~~--------~~~~fD~i~~~ 155 (209)
.+++|+-||.|.++..+.+.|...+.++|+++.+. .++.+|+.++.. ....+|+++..
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~gg 78 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGG 78 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEEC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEec
Confidence 68999999999999999888887788999998743 366788877642 34679999974
No 324
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.57 E-value=0.089 Score=39.43 Aligned_cols=88 Identities=18% Similarity=0.151 Sum_probs=55.1
Q ss_pred hcccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCC--------CCCCceee
Q 028410 90 GKSLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLP--------FFDEAFDV 151 (209)
Q Consensus 90 ~~~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~~~~~fD~ 151 (209)
....++++.+||..|+ |.|.....++. .|. +|+++|.+++..+. ...|..+.. .....+|+
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~ 110 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDV 110 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEE
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeE
Confidence 3346688999999995 33444444444 575 89999987653321 112332211 11246999
Q ss_pred EEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 152 i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
++.+.- ...+.+..+.|+|||+++.+-
T Consensus 111 vi~~~g------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 111 VLNSLA------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEECCC------THHHHHHHHTEEEEEEEEECS
T ss_pred EEECCc------hHHHHHHHHHhccCCEEEEEc
Confidence 987431 245788899999999977653
No 325
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=93.51 E-value=0.1 Score=43.48 Aligned_cols=47 Identities=21% Similarity=0.192 Sum_probs=36.8
Q ss_pred CCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCC------------CCcEEEcCCCCC
Q 028410 96 NHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS------------LPLVSRADPHNL 142 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~------------~~~~~~~d~~~~ 142 (209)
++..|||||.|.|.++..|.+. ...+|+++|+++. .++++.+|+.++
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccch
Confidence 4689999999999999999984 3358999999865 234667777543
No 326
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.28 E-value=0.067 Score=44.43 Aligned_cols=92 Identities=18% Similarity=0.221 Sum_probs=59.0
Q ss_pred HHhcccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCC--CC-------CCCCce
Q 028410 88 LQGKSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHN--LP-------FFDEAF 149 (209)
Q Consensus 88 l~~~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~--~~-------~~~~~f 149 (209)
+.....++++.+||-+|+|. |..+..+++ .|..+|+++|.+++..+. ...|..+ .. ..++.+
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGV 261 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCC
Confidence 33445678999999999764 566666666 476589999988875431 1112221 00 112368
Q ss_pred eeEEcccchhhhCHHHHHHHHHHhcccC-cEEEEEE
Q 028410 150 DVAFTAHLAEALFPSRFVGEMERTVKIG-GVCMVLM 184 (209)
Q Consensus 150 D~i~~~~~~~~~~~~~~l~~~~r~Lkpg-G~lil~~ 184 (209)
|+++...- ....+.+..+.|+|| |+++++-
T Consensus 262 D~vid~~g-----~~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 262 DYSFECIG-----NVKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp SEEEECSC-----CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CEEEECCC-----cHHHHHHHHHhhccCCcEEEEEe
Confidence 98876321 134578889999999 9977653
No 327
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=93.17 E-value=0.04 Score=45.60 Aligned_cols=40 Identities=8% Similarity=-0.084 Sum_probs=35.1
Q ss_pred cCCCCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCCCC
Q 028410 93 LLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSLP 132 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~~~ 132 (209)
..+++..++|..||.|..+..+++. +.++|+|+|.++.++
T Consensus 54 ~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al 95 (347)
T 3tka_A 54 NIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAI 95 (347)
T ss_dssp CCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHH
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHH
Confidence 5688999999999999999999884 467999999998754
No 328
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=93.17 E-value=0.06 Score=42.89 Aligned_cols=63 Identities=16% Similarity=0.130 Sum_probs=44.6
Q ss_pred CceeeEEcc----cchhhh--------CHHHHHHHHHHhcccCcEEEEEEecC-CcccHHHHHHHhcccccccccC
Q 028410 147 EAFDVAFTA----HLAEAL--------FPSRFVGEMERTVKIGGVCMVLMEEC-AGREIKQIVELFRTSSFTEAVR 209 (209)
Q Consensus 147 ~~fD~i~~~----~~~~~~--------~~~~~l~~~~r~LkpgG~lil~~~~~-~~~~~~~~~~l~~~~~~~~~~~ 209 (209)
+.||+||.+ +-.||- ...-+-....+.|||||.+++..+.. +..+.+.+..+.++.+++++.|
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv~~ 285 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRALK 285 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEEC
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeeeec
Confidence 899999996 111111 12334467789999999988776664 6677888888888888877654
No 329
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.06 E-value=0.071 Score=44.22 Aligned_cols=91 Identities=14% Similarity=0.006 Sum_probs=59.0
Q ss_pred HHHhcccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCc---------EEEcCCCCCC------CCCCce
Q 028410 87 HLQGKSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPL---------VSRADPHNLP------FFDEAF 149 (209)
Q Consensus 87 ~l~~~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~---------~~~~d~~~~~------~~~~~f 149 (209)
.+.....++++.+||-+|+|. |..+..+++ .|. +|+++|.+++..+ ++..+..++. .....+
T Consensus 180 al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~ 258 (363)
T 3uog_A 180 ALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGA 258 (363)
T ss_dssp HHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCE
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCc
Confidence 333456678999999999775 666666776 576 9999998866332 2221111110 123479
Q ss_pred eeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 150 D~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
|+++...- ...+....+.|+|||+++++-
T Consensus 259 D~vid~~g------~~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 259 DHILEIAG------GAGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp EEEEEETT------SSCHHHHHHHEEEEEEEEEEC
T ss_pred eEEEECCC------hHHHHHHHHHhhcCCEEEEEe
Confidence 99987421 124677889999999987764
No 330
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.77 E-value=0.066 Score=43.27 Aligned_cols=55 Identities=18% Similarity=0.232 Sum_probs=37.9
Q ss_pred CcEEEcCCCC-C-CCCCCceeeEEcc--cch--h----------------hh-CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 132 PLVSRADPHN-L-PFFDEAFDVAFTA--HLA--E----------------AL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 132 ~~~~~~d~~~-~-~~~~~~fD~i~~~--~~~--~----------------~~-~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
..++++|..+ + .+++++||+|+++ +.. . .+ ....++.++.++|||||.+++.+..
T Consensus 22 ~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 22 HRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp EEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 4567777765 2 2467889999986 110 0 11 2356788999999999999888764
No 331
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=92.63 E-value=0.14 Score=46.15 Aligned_cols=104 Identities=16% Similarity=0.130 Sum_probs=66.3
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc--------C-----CceEEEecCCCCCC-----------------------------
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI--------G-----VADVTGVELMDSLP----------------------------- 132 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~--------~-----~~~v~~vD~s~~~~----------------------------- 132 (209)
++..+|+|+|-|+|.....+.+. + ...++++|..|...
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 45679999999999877766441 1 13689999866311
Q ss_pred --------------cEEEcCCCC-CC-CC---CCceeeEEcccchhhhCH----HHHHHHHHHhcccCcEEEEEEecCCc
Q 028410 133 --------------LVSRADPHN-LP-FF---DEAFDVAFTAHLAEALFP----SRFVGEMERTVKIGGVCMVLMEECAG 189 (209)
Q Consensus 133 --------------~~~~~d~~~-~~-~~---~~~fD~i~~~~~~~~~~~----~~~l~~~~r~LkpgG~lil~~~~~~~ 189 (209)
+++.+|+.+ ++ +. +..+|+++...+.-..+| .+++..+.++++|||. +++....
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~--~~t~~~~- 213 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGT--FSTFTAA- 213 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEE--EEESCCC-
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCE--EEeccCc-
Confidence 134455433 22 21 468999998654332223 8899999999999998 4444332
Q ss_pred ccHHHHHHHhccccc
Q 028410 190 REIKQIVELFRTSSF 204 (209)
Q Consensus 190 ~~~~~~~~l~~~~~~ 204 (209)
..+.+.+.+.+|
T Consensus 214 ---~~vr~~l~~aGf 225 (689)
T 3pvc_A 214 ---GFVRRGLQQAGF 225 (689)
T ss_dssp ---HHHHHHHHHTTC
T ss_pred ---HHHHHHHHhCCe
Confidence 355666666666
No 332
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=92.62 E-value=0.65 Score=36.85 Aligned_cols=109 Identities=8% Similarity=0.079 Sum_probs=64.4
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc--------CCceEEEecCCCCCCc---------------------------------
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI--------GVADVTGVELMDSLPL--------------------------------- 133 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~--------~~~~v~~vD~s~~~~~--------------------------------- 133 (209)
.-+..|+|+|+-.|..+..++.. ...++++.|--+.+.+
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 56789999999999988887651 2469999995444332
Q ss_pred --------------EEEcCCCC-CC-----CCCCceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEEecC--Cccc
Q 028410 134 --------------VSRADPHN-LP-----FFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEEC--AGRE 191 (209)
Q Consensus 134 --------------~~~~d~~~-~~-----~~~~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~--~~~~ 191 (209)
++.|++.+ +| .+..+||+++... ..+......+..+...|+|||.+++--... -...
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~-D~Y~~t~~~le~~~p~l~~GGvIv~DD~~~~~w~G~ 226 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL-DLYEPTKAVLEAIRPYLTKGSIVAFDELDNPKWPGE 226 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC-CCHHHHHHHHHHHGGGEEEEEEEEESSTTCTTCTHH
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC-cccchHHHHHHHHHHHhCCCcEEEEcCCCCCCChHH
Confidence 12222211 01 1234677776632 112223567888999999999855443311 0123
Q ss_pred HHHHHHHhccccc
Q 028410 192 IKQIVELFRTSSF 204 (209)
Q Consensus 192 ~~~~~~l~~~~~~ 204 (209)
.+.+.+++...++
T Consensus 227 ~~A~~ef~~~~~~ 239 (257)
T 3tos_A 227 NIAMRKVLGLDHA 239 (257)
T ss_dssp HHHHHHHTCTTSS
T ss_pred HHHHHHHHhhCCC
Confidence 4445556665544
No 333
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=92.20 E-value=0.058 Score=44.64 Aligned_cols=90 Identities=18% Similarity=0.140 Sum_probs=57.8
Q ss_pred hcccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcEEE--cC------CCCC---C--------CCCCc
Q 028410 90 GKSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLVSR--AD------PHNL---P--------FFDEA 148 (209)
Q Consensus 90 ~~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~~~--~d------~~~~---~--------~~~~~ 148 (209)
....++++.+||-+|+|. |..+..+++ .|...|+++|.+++..++.. ++ ..+. . .....
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g 252 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIE 252 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCC
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCC
Confidence 344678999999999865 667777777 57656999998876433111 10 0000 0 12346
Q ss_pred eeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 149 FDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 149 fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
+|+++...- ....+....+.|++||+++++-
T Consensus 253 ~Dvvid~~g-----~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 253 PAVALECTG-----VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp CSEEEECSC-----CHHHHHHHHHHSCTTCEEEECC
T ss_pred CCEEEECCC-----ChHHHHHHHHHhcCCCEEEEEc
Confidence 888876321 2345788899999999987663
No 334
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.09 E-value=0.082 Score=43.42 Aligned_cols=88 Identities=17% Similarity=0.167 Sum_probs=57.4
Q ss_pred ccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcEE-------EcCCCC-CC------CCCCceeeEEcc
Q 028410 92 SLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLVS-------RADPHN-LP------FFDEAFDVAFTA 155 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~~-------~~d~~~-~~------~~~~~fD~i~~~ 155 (209)
..++++.+||-+|+|. |..+..+++ .|..+|+++|.+++..++. ..|..+ .. .....+|+++..
T Consensus 167 ~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~ 246 (345)
T 3jv7_A 167 PLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDF 246 (345)
T ss_dssp GGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEES
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEEC
Confidence 3568999999999875 677777777 4446999999987643311 111111 10 012368888763
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
. -....+....+.|+|||+++++-
T Consensus 247 ~-----G~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 247 V-----GAQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp S-----CCHHHHHHHHHHEEEEEEEEECS
T ss_pred C-----CCHHHHHHHHHHHhcCCEEEEEC
Confidence 2 12346788999999999987663
No 335
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.00 E-value=0.22 Score=41.02 Aligned_cols=86 Identities=15% Similarity=0.127 Sum_probs=56.1
Q ss_pred cCCCC------CeEEEEcCCC-ChhH-HHHH-h-cCCceEEEecCCCC---CCcE-------EEcCCCCCCCC-----CC
Q 028410 93 LLFNH------SKVLCVSAGA-GHEV-MAFN-S-IGVADVTGVELMDS---LPLV-------SRADPHNLPFF-----DE 147 (209)
Q Consensus 93 ~~~~~------~~iLDiGcG~-G~~~-~~la-~-~~~~~v~~vD~s~~---~~~~-------~~~d~~~~~~~-----~~ 147 (209)
.++++ .+||-+|+|. |..+ ..++ + .|..+|+++|.+++ ..++ .. |..+..+. ++
T Consensus 163 ~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~i~~~~g 241 (357)
T 2b5w_A 163 YASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQTPVEDVPDVYE 241 (357)
T ss_dssp HHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTTSCGGGHHHHSC
T ss_pred CCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCccCHHHHHHhCC
Confidence 44677 9999999853 5666 7777 6 57645999999876 3331 12 33322111 13
Q ss_pred ceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 148 AFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 148 ~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
.+|+|+...- ....+.+..+.|+|||+++.+-
T Consensus 242 g~Dvvid~~g-----~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 242 QMDFIYEATG-----FPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp CEEEEEECSC-----CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCC-----ChHHHHHHHHHHhcCCEEEEEe
Confidence 6898876321 1345788899999999977654
No 336
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=91.73 E-value=0.072 Score=43.91 Aligned_cols=88 Identities=14% Similarity=0.025 Sum_probs=56.3
Q ss_pred cccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCC-CCC--------C---CCce
Q 028410 91 KSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHN-LPF--------F---DEAF 149 (209)
Q Consensus 91 ~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~-~~~--------~---~~~f 149 (209)
...++++.+||-+|+|. |..+..+++ .|. +|+++|.+++..+. ...|..+ ..+ . ...+
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~ 241 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLP 241 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCC
Confidence 34568999999999864 566666776 576 69999988763321 1112221 111 1 2468
Q ss_pred eeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 150 D~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
|+++...- ....+....+.|+|||+++.+-
T Consensus 242 D~vid~~g-----~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 242 NVTIDCSG-----NEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SEEEECSC-----CHHHHHHHHHHSCTTCEEEECS
T ss_pred CEEEECCC-----CHHHHHHHHHHHhcCCEEEEEe
Confidence 98876321 1345778899999999987653
No 337
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=91.69 E-value=0.066 Score=43.77 Aligned_cols=93 Identities=14% Similarity=0.040 Sum_probs=59.9
Q ss_pred HHHHHhcccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcEE--------EcCCCCCC-------CCC
Q 028410 85 FKHLQGKSLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLVS--------RADPHNLP-------FFD 146 (209)
Q Consensus 85 ~~~l~~~~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~~--------~~d~~~~~-------~~~ 146 (209)
+..+.....++++.+||-.|+ |.|..+..+++ .|. +|+++|.+++..+.. ..|..+.. ...
T Consensus 138 ~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 216 (336)
T 4b7c_A 138 YFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECP 216 (336)
T ss_dssp HHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCT
T ss_pred HHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcC
Confidence 334445567799999999998 34566666666 576 999999886533211 12222211 112
Q ss_pred CceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 147 EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 147 ~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
+.+|+++.+.- ...+....+.|++||+++++-
T Consensus 217 ~~~d~vi~~~g------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 217 KGIDVFFDNVG------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp TCEEEEEESSC------HHHHHHHHTTEEEEEEEEECC
T ss_pred CCceEEEECCC------cchHHHHHHHHhhCCEEEEEe
Confidence 46999887421 136788899999999987653
No 338
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=91.64 E-value=0.48 Score=39.79 Aligned_cols=88 Identities=15% Similarity=0.128 Sum_probs=54.4
Q ss_pred cCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCC--------CCCCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLP--------FFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~~~~~fD~i~~~ 155 (209)
.++++.+||=+|+|. |..+..+++ .|..+|+++|.+++..++ ...|..+.. .....+|+++-.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~ 289 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEA 289 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEEC
Confidence 578999999999864 556666666 576699999988764331 112222211 122368998863
Q ss_pred cchhhhCHHHHHHHHHHhc----ccCcEEEEEE
Q 028410 156 HLAEALFPSRFVGEMERTV----KIGGVCMVLM 184 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~L----kpgG~lil~~ 184 (209)
.- .+...+..+.+.| ++||+++++-
T Consensus 290 ~g----~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 290 TG----VPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp SS----CHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CC----CcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 21 2323445555555 9999987763
No 339
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=91.12 E-value=0.16 Score=41.64 Aligned_cols=86 Identities=15% Similarity=0.225 Sum_probs=55.6
Q ss_pred cCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCCCCC------CceeeEEcccc
Q 028410 93 LLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLPFFD------EAFDVAFTAHL 157 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~~~~------~~fD~i~~~~~ 157 (209)
.++++.+||-+|+|. |..+..+++ .|. +|+++|.++...+. ...|..+..+.+ +.+|+++...-
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g 239 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAV 239 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCC
Confidence 568899999999863 566666666 576 99999988763321 112332211100 36888876321
Q ss_pred hhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 158 AEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 158 ~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
....+.+..+.|++||+++.+-
T Consensus 240 -----~~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 240 -----SKPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp -----CHHHHHHHHHHEEEEEEEEECC
T ss_pred -----CHHHHHHHHHHhhcCCEEEEec
Confidence 1345788899999999976653
No 340
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=91.10 E-value=0.2 Score=43.98 Aligned_cols=64 Identities=14% Similarity=0.115 Sum_probs=45.1
Q ss_pred CCceeeEEcc----cchhhh--------CHHHHHHHHHHhcccCcEEEEEEecC-CcccHHHHHHHhcccccccccC
Q 028410 146 DEAFDVAFTA----HLAEAL--------FPSRFVGEMERTVKIGGVCMVLMEEC-AGREIKQIVELFRTSSFTEAVR 209 (209)
Q Consensus 146 ~~~fD~i~~~----~~~~~~--------~~~~~l~~~~r~LkpgG~lil~~~~~-~~~~~~~~~~l~~~~~~~~~~~ 209 (209)
++.||+||.+ +-.||- -..-+-....+.|||||.+++..+.. +..+.+.+..+-++.+++++.|
T Consensus 219 ~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~~rv~~ 295 (670)
T 4gua_A 219 QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKFVRVSAAR 295 (670)
T ss_dssp CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEEEEEEC
T ss_pred CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhheeeeeeeC
Confidence 5799999996 111211 12334477889999999988776664 6677788888888888877653
No 341
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=91.09 E-value=0.17 Score=41.42 Aligned_cols=87 Identities=14% Similarity=0.068 Sum_probs=54.8
Q ss_pred cccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcEE------EcCCCCCCC-------CCCceeeEEcc
Q 028410 91 KSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLVS------RADPHNLPF-------FDEAFDVAFTA 155 (209)
Q Consensus 91 ~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~~------~~d~~~~~~-------~~~~fD~i~~~ 155 (209)
...+ ++.+||-+|+|. |..+..+++ .|..+|+++|.+++..+.. ..|..+..+ ....+|+++..
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~ 238 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEF 238 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEEC
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEEC
Confidence 3455 899999999853 556666666 5655899999886533221 122221111 02358888763
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
.- ....+++..+.|++||+++.+
T Consensus 239 ~g-----~~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 239 SG-----NEAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp SC-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred CC-----CHHHHHHHHHHHhcCCEEEEE
Confidence 21 134578889999999997665
No 342
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.05 E-value=0.3 Score=39.99 Aligned_cols=91 Identities=16% Similarity=0.137 Sum_probs=58.6
Q ss_pred HHHHhcccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCc---------EEEcCCCCCC------CCCC
Q 028410 86 KHLQGKSLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPL---------VSRADPHNLP------FFDE 147 (209)
Q Consensus 86 ~~l~~~~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~---------~~~~d~~~~~------~~~~ 147 (209)
..+.....++++.+||-.|+ |.|..+..+++ .|. +|++++.+++..+ ++..+ .++. ....
T Consensus 149 ~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~ 226 (342)
T 4eye_A 149 FAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGA 226 (342)
T ss_dssp HHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTS
T ss_pred HHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCC
Confidence 33435566789999999997 34666666766 576 9999998876433 22222 2110 1223
Q ss_pred ceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 148 AFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 148 ~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
.+|+++.+.-. ..+....+.|++||+++++-
T Consensus 227 g~Dvvid~~g~------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 227 GVDMVVDPIGG------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp CEEEEEESCC--------CHHHHHHTEEEEEEEEEC-
T ss_pred CceEEEECCch------hHHHHHHHhhcCCCEEEEEE
Confidence 69999874211 24678889999999987663
No 343
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.05 E-value=0.21 Score=41.52 Aligned_cols=84 Identities=17% Similarity=0.211 Sum_probs=54.6
Q ss_pred cCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcEE-------EcCCCCC----CCCCCceeeEEcccchh
Q 028410 93 LLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLVS-------RADPHNL----PFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~~-------~~d~~~~----~~~~~~fD~i~~~~~~~ 159 (209)
.++++.+||-+|+|. |..+..+++ .|. +|+++|.+++..+.. ..|..+. .. .+.+|+|+...-.
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~-~~g~Dvvid~~g~- 267 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSRNADEMAAH-LKSFDFILNTVAA- 267 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTT-TTCEEEEEECCSS-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHh-hcCCCEEEECCCC-
Confidence 568899999999874 666677776 576 799999887744311 1111110 01 1469999864211
Q ss_pred hhCHHHHHHHHHHhcccCcEEEEE
Q 028410 160 ALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 160 ~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
...+.+..+.|+|||+++.+
T Consensus 268 ----~~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 268 ----PHNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp ----CCCHHHHHTTEEEEEEEEEC
T ss_pred ----HHHHHHHHHHhccCCEEEEe
Confidence 12356788999999997655
No 344
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=90.88 E-value=0.25 Score=41.86 Aligned_cols=37 Identities=16% Similarity=0.130 Sum_probs=31.8
Q ss_pred CCCCCeEEEEcCCCChhHHHHH-h-cC-CceEEEecCCCC
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFN-S-IG-VADVTGVELMDS 130 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la-~-~~-~~~v~~vD~s~~ 130 (209)
++++..++|+||+.|..+..++ . .+ .++|+++|+++.
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~ 263 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRI 263 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHH
Confidence 3788999999999999999988 4 33 379999999987
No 345
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=90.75 E-value=0.3 Score=40.28 Aligned_cols=106 Identities=11% Similarity=0.065 Sum_probs=66.6
Q ss_pred CCeEEEEcCCCChhHHHHHhcCC--ceEEEecCCCCCCc----------EEEcCCCCCCC---CCCceeeEEcc------
Q 028410 97 HSKVLCVSAGAGHEVMAFNSIGV--ADVTGVELMDSLPL----------VSRADPHNLPF---FDEAFDVAFTA------ 155 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~~~~--~~v~~vD~s~~~~~----------~~~~d~~~~~~---~~~~fD~i~~~------ 155 (209)
..+++|+-||.|.....+.+.|. ..+.++|+++.+.+ +..+|+.++.. +...+|+++..
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~f 82 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPF 82 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCS
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcch
Confidence 35899999999999998887664 56889999987432 56677777642 23368999864
Q ss_pred ---cchhhh-CHH-HHHHHHHHhc---c-cCcEEEEEEecCCc---ccHHHHHHHhccccc
Q 028410 156 ---HLAEAL-FPS-RFVGEMERTV---K-IGGVCMVLMEECAG---REIKQIVELFRTSSF 204 (209)
Q Consensus 156 ---~~~~~~-~~~-~~l~~~~r~L---k-pgG~lil~~~~~~~---~~~~~~~~l~~~~~~ 204 (209)
..-... |+. .++.++.+++ + | .+++..+..+- ...+.+.+.|+..|+
T Consensus 83 S~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vlENV~gl~~~~~~~~i~~~l~~~GY 141 (333)
T 4h0n_A 83 TRNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILMENVKGFENSTVRNLFIDKLKECNF 141 (333)
T ss_dssp EETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEEEECTTGGGSHHHHHHHHHHHHTTE
T ss_pred hhhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEEecchhhhhhhHHHHHHHHHHhCCC
Confidence 000111 222 3444444444 4 6 44566655543 235667777776665
No 346
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=90.71 E-value=0.11 Score=42.33 Aligned_cols=90 Identities=17% Similarity=0.080 Sum_probs=56.9
Q ss_pred HHhcccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCc-------EEEcCCCC-CC-------CCCCce
Q 028410 88 LQGKSLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPL-------VSRADPHN-LP-------FFDEAF 149 (209)
Q Consensus 88 l~~~~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~-------~~~~d~~~-~~-------~~~~~f 149 (209)
+.....++++.+||-.|+ |.|.....++. .|. +|+++|.+++..+ ....|..+ -. ...+.+
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 137 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp HHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCE
T ss_pred HHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCC
Confidence 334456788999999997 44555555555 576 9999998765322 11223332 11 112469
Q ss_pred eeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 150 D~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
|+++.+.-. ..+.+..+.|+|||+++++-
T Consensus 216 d~vi~~~g~------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 216 DCYFDNVGG------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEEESSCH------HHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCCh------HHHHHHHHHHhcCCEEEEEe
Confidence 999874321 24788889999999987653
No 347
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.39 E-value=0.46 Score=39.09 Aligned_cols=91 Identities=13% Similarity=0.139 Sum_probs=56.8
Q ss_pred HHHhcccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCC--------CCCCc
Q 028410 87 HLQGKSLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLP--------FFDEA 148 (209)
Q Consensus 87 ~l~~~~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~~~~~ 148 (209)
.+.....++++.+||-.|+ |.|..+..+++ .|. +|+++|.+++..+. ...|..+.. .....
T Consensus 161 al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~ 239 (351)
T 1yb5_A 161 ALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKG 239 (351)
T ss_dssp HHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTC
T ss_pred HHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCC
Confidence 3333456788999999997 34455555555 576 89999988653321 112222211 11236
Q ss_pred eeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 149 FDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 149 fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
+|+++.+.- ...+.+..+.|+|||+++++-
T Consensus 240 ~D~vi~~~G------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 240 IDIIIEMLA------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEEESCH------HHHHHHHHHHEEEEEEEEECC
T ss_pred cEEEEECCC------hHHHHHHHHhccCCCEEEEEe
Confidence 999987431 134677889999999977653
No 348
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=90.24 E-value=0.21 Score=41.00 Aligned_cols=88 Identities=18% Similarity=0.096 Sum_probs=56.1
Q ss_pred cccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCCC--------CCCceeeEE
Q 028410 91 KSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLPF--------FDEAFDVAF 153 (209)
Q Consensus 91 ~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~~--------~~~~fD~i~ 153 (209)
...+ ++.+||-+|+|. |..+..+++ .|..+|+++|.+++..+. ...|..+..+ ....+|+++
T Consensus 163 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vi 241 (348)
T 2d8a_A 163 AGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFL 241 (348)
T ss_dssp TSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEE
T ss_pred hcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEE
Confidence 3455 899999999853 555666666 565589999988763321 1123222111 123689998
Q ss_pred cccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
...- ....+.+..+.|++||+++.+-
T Consensus 242 d~~g-----~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 242 EFSG-----APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp ECSC-----CHHHHHHHHHHEEEEEEEEECC
T ss_pred ECCC-----CHHHHHHHHHHHhcCCEEEEEc
Confidence 7421 1345788899999999976653
No 349
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.04 E-value=0.25 Score=40.46 Aligned_cols=40 Identities=8% Similarity=-0.028 Sum_probs=34.6
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCcE
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPLV 134 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~~ 134 (209)
..++..|||.-||+|..+.+..+.|. +.+|+|+++...+.
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~ 289 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAA 289 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHH
Confidence 47899999999999999999888874 99999999875543
No 350
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=89.94 E-value=0.55 Score=42.16 Aligned_cols=53 Identities=21% Similarity=0.288 Sum_probs=36.3
Q ss_pred CCceeeEEcccchhhhCH----HHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 146 DEAFDVAFTAHLAEALFP----SRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 146 ~~~fD~i~~~~~~~~~~~----~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
+..||+++...+....+| .+++..+.+.++|||. +++.... ..+...+.+.+|
T Consensus 177 ~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~--~~t~~~~----~~vr~~L~~aGf 233 (676)
T 3ps9_A 177 NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGT--LATFTSA----GFVRRGLQDAGF 233 (676)
T ss_dssp TTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEE--EEESCCC----HHHHHHHHHHTC
T ss_pred CCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCE--EEeccCc----HHHHHHHHhCCe
Confidence 467999998654433333 7899999999999998 4444432 345555666665
No 351
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=89.89 E-value=0.063 Score=44.89 Aligned_cols=88 Identities=17% Similarity=0.094 Sum_probs=55.0
Q ss_pred cc-CCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcEE-------EcCCC---CCC--------CCCCcee
Q 028410 92 SL-LFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLVS-------RADPH---NLP--------FFDEAFD 150 (209)
Q Consensus 92 ~~-~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~~-------~~d~~---~~~--------~~~~~fD 150 (209)
.. ++++.+||-+|+|. |..+..+++ .|..+|+++|.+++..+.. ..|.. +.. .....+|
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~D 269 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGAD 269 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEE
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCc
Confidence 35 68899999999652 556666666 4634999999887633211 11211 100 1123699
Q ss_pred eEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 151 VAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 151 ~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
+|+...- ....+.+..+.|+|||+++.+-
T Consensus 270 vvid~~g-----~~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 270 FILEATG-----DSRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp EEEECSS-----CTTHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCC-----CHHHHHHHHHHHhcCCEEEEEe
Confidence 9986321 1234678889999999976653
No 352
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=89.71 E-value=0.33 Score=38.25 Aligned_cols=51 Identities=16% Similarity=0.322 Sum_probs=31.8
Q ss_pred EEEcCCCC-C-CCCCCceeeEEcc---cch-----------hhh-CHHHHHHHHHHhcccCcEEEEEE
Q 028410 134 VSRADPHN-L-PFFDEAFDVAFTA---HLA-----------EAL-FPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 134 ~~~~d~~~-~-~~~~~~fD~i~~~---~~~-----------~~~-~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
++++|..+ + .+++++||+|++. +.. .+. .....+.++.++|||||.+++..
T Consensus 7 l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 7 IHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp EEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 44555433 1 1345677887775 111 111 24677889999999999987775
No 353
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=89.45 E-value=0.31 Score=40.32 Aligned_cols=83 Identities=14% Similarity=0.115 Sum_probs=54.4
Q ss_pred CCCeEEEEc-CC-CChhHHHHHhc-CCceEEEecCCCCCCcE-------EEcCCCC-C-----CCCCCceeeEEcccchh
Q 028410 96 NHSKVLCVS-AG-AGHEVMAFNSI-GVADVTGVELMDSLPLV-------SRADPHN-L-----PFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 96 ~~~~iLDiG-cG-~G~~~~~la~~-~~~~v~~vD~s~~~~~~-------~~~d~~~-~-----~~~~~~fD~i~~~~~~~ 159 (209)
++.+||=.| +| .|..+..+++. +..+|+++|.+++..++ ...|..+ + ....+.+|+++...
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~--- 247 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTT--- 247 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECS---
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECC---
Confidence 788999998 44 46777778874 44599999998753321 1112211 0 11235789887632
Q ss_pred hhCHHHHHHHHHHhcccCcEEEEE
Q 028410 160 ALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 160 ~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
.....+.+..+.|+|||+++++
T Consensus 248 --g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 248 --HTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp --CHHHHHHHHHHHSCTTCEEEEC
T ss_pred --CchhhHHHHHHHhcCCCEEEEE
Confidence 1345678899999999998766
No 354
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=88.92 E-value=0.18 Score=40.56 Aligned_cols=82 Identities=16% Similarity=0.105 Sum_probs=54.0
Q ss_pred CCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcEEE-------cCCCC-CCCCC--CceeeEEcccchhh
Q 028410 94 LFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLVSR-------ADPHN-LPFFD--EAFDVAFTAHLAEA 160 (209)
Q Consensus 94 ~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~~~-------~d~~~-~~~~~--~~fD~i~~~~~~~~ 160 (209)
++++.+||-.|+ |.|..+..+++ .|. +|+++|.+++..+... .|..+ ..+.+ +.+|+++. . ..
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~-g~- 198 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-V-RG- 198 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-C-SC-
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-C-CH-
Confidence 789999999997 34666666666 576 9999999877554211 11111 00000 46888876 2 21
Q ss_pred hCHHHHHHHHHHhcccCcEEEEE
Q 028410 161 LFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 161 ~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
..+....+.+++||+++.+
T Consensus 199 ----~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 199 ----KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp ----TTHHHHHTTEEEEEEEEEC
T ss_pred ----HHHHHHHHhhccCCEEEEE
Confidence 3567889999999997765
No 355
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=88.85 E-value=0.39 Score=39.29 Aligned_cols=35 Identities=20% Similarity=0.079 Sum_probs=32.0
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCC
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMD 129 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~ 129 (209)
..++..|||.-||+|..+.+..+.|. +.+|+|+++
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~ 274 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAP 274 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESST
T ss_pred CCCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCc
Confidence 47899999999999999999888874 999999998
No 356
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=88.82 E-value=0.19 Score=41.42 Aligned_cols=110 Identities=9% Similarity=0.090 Sum_probs=70.6
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCC--ceE-EEecCCCCCCc---------EEEcCCCCCCC---CCCceeeEEcc----
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGV--ADV-TGVELMDSLPL---------VSRADPHNLPF---FDEAFDVAFTA---- 155 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~--~~v-~~vD~s~~~~~---------~~~~d~~~~~~---~~~~fD~i~~~---- 155 (209)
+...+++|+.||.|.....+.+.|. ..+ .++|+++.+.+ ++.+|+.++.. +...+|+++..
T Consensus 8 ~~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ 87 (327)
T 3qv2_A 8 QKQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEEVQVKNLDSISIKQIESLNCNTWFMSPPCQ 87 (327)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCCCBCCCTTTCCHHHHHHTCCCEEEECCCCT
T ss_pred CCCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCCcccCChhhcCHHHhccCCCCEEEecCCcc
Confidence 4567999999999999999988764 456 79999986432 56788887652 22368999864
Q ss_pred cc--h-----hhh-CHH-HHHHHHHH-hccc---CcEEEEEEecCCc---ccHHHHHHHhccccc
Q 028410 156 HL--A-----EAL-FPS-RFVGEMER-TVKI---GGVCMVLMEECAG---REIKQIVELFRTSSF 204 (209)
Q Consensus 156 ~~--~-----~~~-~~~-~~l~~~~r-~Lkp---gG~lil~~~~~~~---~~~~~~~~l~~~~~~ 204 (209)
.. . ... |+. .++.++.+ +++. .-.+++..+..+- ..++.+.+.|+..|+
T Consensus 88 ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~~~~~~~i~~~l~~~GY 152 (327)
T 3qv2_A 88 PYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKESLVFKEIYNILIKNQY 152 (327)
T ss_dssp TCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGGSHHHHHHHHHHHHTTC
T ss_pred CcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcChHHHHHHHHHHHhCCC
Confidence 12 1 011 333 56677777 5532 1344566555432 345667777776665
No 357
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=88.59 E-value=0.5 Score=38.45 Aligned_cols=88 Identities=15% Similarity=0.053 Sum_probs=56.4
Q ss_pred hcccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCC--------CCCCceee
Q 028410 90 GKSLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLP--------FFDEAFDV 151 (209)
Q Consensus 90 ~~~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~~~~~fD~ 151 (209)
....++++.+||-.|+ |.|..+..+++ .|. +|+++|.+++..+. ...|..+.. .....+|+
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~ 220 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDA 220 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceE
Confidence 3446789999999994 34566666666 576 89999987663321 111222211 11346999
Q ss_pred EEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 152 i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
++.+.-. ..+....+.|+|||+++.+-
T Consensus 221 vid~~g~------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 221 SFDSVGK------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEECCGG------GGHHHHHHHEEEEEEEEECC
T ss_pred EEECCCh------HHHHHHHHHhccCCEEEEEc
Confidence 9874321 34678889999999987753
No 358
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=88.24 E-value=0.57 Score=38.27 Aligned_cols=86 Identities=10% Similarity=0.026 Sum_probs=56.6
Q ss_pred ccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCC--------CCCCceeeEE
Q 028410 92 SLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLP--------FFDEAFDVAF 153 (209)
Q Consensus 92 ~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~~~~~fD~i~ 153 (209)
..++++.+||-.|+ |.|..+..+++ .|. +|+++|.+++..+. ...|..+.. .....+|+++
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi 240 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVV 240 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEE
Confidence 45688999999998 45677777776 576 99999987653321 112332211 1124799998
Q ss_pred cccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
.+.- . ..+....+.|++||+++.+-
T Consensus 241 ~~~g-~-----~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 241 DHTG-A-----LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp ESSC-S-----SSHHHHHHHEEEEEEEEESS
T ss_pred ECCC-H-----HHHHHHHHhhccCCEEEEEe
Confidence 7432 1 24677889999999976653
No 359
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=88.07 E-value=0.085 Score=43.35 Aligned_cols=85 Identities=6% Similarity=0.063 Sum_probs=54.6
Q ss_pred cCCCCCeEEEEcCCC-ChhHHHHHh-c--CCceEEEecCCCCCCcEE-------EcCCCC-C----CCC-CCceeeEEcc
Q 028410 93 LLFNHSKVLCVSAGA-GHEVMAFNS-I--GVADVTGVELMDSLPLVS-------RADPHN-L----PFF-DEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~~iLDiGcG~-G~~~~~la~-~--~~~~v~~vD~s~~~~~~~-------~~d~~~-~----~~~-~~~fD~i~~~ 155 (209)
.+ ++.+||-+|+|. |..+..+++ . |. +|+++|.+++..++. ..|..+ . .+. ...+|+|+..
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~ 245 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDL 245 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEEC
Confidence 45 899999999864 566667776 5 75 899999887643311 111111 0 011 2368999863
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
.- ....+....+.|+|||+++.+-
T Consensus 246 ~g-----~~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 246 VG-----TEETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp SC-----CHHHHHHHHHHEEEEEEEEECC
T ss_pred CC-----ChHHHHHHHHHhhcCCEEEEeC
Confidence 21 1345788899999999977653
No 360
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=87.83 E-value=0.24 Score=40.58 Aligned_cols=86 Identities=15% Similarity=0.153 Sum_probs=55.6
Q ss_pred cCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCC-CCC-------CCCceeeEEc
Q 028410 93 LLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHN-LPF-------FDEAFDVAFT 154 (209)
Q Consensus 93 ~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~-~~~-------~~~~fD~i~~ 154 (209)
.++++.+||-.|+ |.|..+..++. .|. +|+++|.+++..+. ...|..+ ..+ .++.+|+++.
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~ 244 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVIN 244 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEE
Confidence 5688999999998 34566666655 576 99999988763321 1223331 110 1126899887
Q ss_pred ccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 155 AHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 155 ~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
+.- ....+++..+.|++||+++.+-
T Consensus 245 ~~g-----~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 245 VSV-----SEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp CSS-----CHHHHHHHTTSEEEEEEEEECC
T ss_pred CCC-----cHHHHHHHHHHHhcCCEEEEEe
Confidence 421 1346788899999999976653
No 361
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=87.79 E-value=0.85 Score=37.60 Aligned_cols=87 Identities=18% Similarity=0.189 Sum_probs=56.5
Q ss_pred cccCCCCCeEEEEc--CCCChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCC-------CCCCceeeEE
Q 028410 91 KSLLFNHSKVLCVS--AGAGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLP-------FFDEAFDVAF 153 (209)
Q Consensus 91 ~~~~~~~~~iLDiG--cG~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~-------~~~~~fD~i~ 153 (209)
...++++.+||-.| .|.|..+..+++ .|. +|+++|.+++..+. ...|..+.. .....+|+++
T Consensus 158 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vi 236 (362)
T 2c0c_A 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVY 236 (362)
T ss_dssp HTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEE
Confidence 34568899999999 346677777776 576 89999988653221 111211111 1124689998
Q ss_pred cccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
.+.- ...+....+.|++||+++++-
T Consensus 237 d~~g------~~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 237 ESVG------GAMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp ECSC------THHHHHHHHHEEEEEEEEECC
T ss_pred ECCC------HHHHHHHHHHHhcCCEEEEEe
Confidence 7421 146788899999999976654
No 362
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=87.70 E-value=0.39 Score=39.18 Aligned_cols=91 Identities=13% Similarity=0.100 Sum_probs=57.4
Q ss_pred HHHHhcccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcE--------EEcCCCCC-CC-------CC
Q 028410 86 KHLQGKSLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLV--------SRADPHNL-PF-------FD 146 (209)
Q Consensus 86 ~~l~~~~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~--------~~~d~~~~-~~-------~~ 146 (209)
..+.....++++.+||-.|+ |.|..+..+++ .|. +|+++|.+++..+. ...|..+. .+ ..
T Consensus 145 ~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~ 223 (345)
T 2j3h_A 145 AGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFP 223 (345)
T ss_dssp HHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCT
T ss_pred HHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhC
Confidence 33334456788999999997 34566666665 576 89999987653221 11232221 11 12
Q ss_pred CceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 147 EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 147 ~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
+.+|+++.+.- . ..+....+.|++||+++++
T Consensus 224 ~~~d~vi~~~g-----~-~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 224 NGIDIYFENVG-----G-KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp TCEEEEEESSC-----H-HHHHHHHTTEEEEEEEEEC
T ss_pred CCCcEEEECCC-----H-HHHHHHHHHHhcCCEEEEE
Confidence 46899887421 1 3678889999999998765
No 363
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=87.62 E-value=5.4 Score=32.31 Aligned_cols=89 Identities=11% Similarity=0.031 Sum_probs=56.6
Q ss_pred CCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC------------------cEEEcCCCCCC---------CCCCce
Q 028410 97 HSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP------------------LVSRADPHNLP---------FFDEAF 149 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~------------------~~~~~d~~~~~---------~~~~~f 149 (209)
...|+++|||--.....+.......++-+|. |..+ .++..|+.+ . +..+..
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD~-P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEIDQ-PKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSAR 180 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEEC-HHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSC
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcCC-HHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCC
Confidence 3579999999777766665321247888883 4311 256677765 2 212233
Q ss_pred eeEEcccchhhhC---HHHHHHHHHHhcccCcEEEEEEecC
Q 028410 150 DVAFTAHLAEALF---PSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 150 D~i~~~~~~~~~~---~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
=++++-.+.+++. ...+++.+...+.||+.+++.....
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 4455556777773 3677788888888999977776544
No 364
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=87.60 E-value=0.79 Score=37.43 Aligned_cols=52 Identities=15% Similarity=0.275 Sum_probs=34.2
Q ss_pred EcCCCC-C-CCCCCceeeEEcc---cch--------hhh-CHHHHHHHHHHhcccCcEEEEEEecC
Q 028410 136 RADPHN-L-PFFDEAFDVAFTA---HLA--------EAL-FPSRFVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 136 ~~d~~~-~-~~~~~~fD~i~~~---~~~--------~~~-~~~~~l~~~~r~LkpgG~lil~~~~~ 187 (209)
++|..+ + .+++++||+|++. +.. .++ .....+.++.++|+|||.+++.....
T Consensus 44 ~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~ 109 (319)
T 1eg2_A 44 VCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQ 109 (319)
T ss_dssp ECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSC
T ss_pred CCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcc
Confidence 566543 1 2346778888875 111 122 34677889999999999988876643
No 365
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=87.59 E-value=0.48 Score=38.41 Aligned_cols=91 Identities=12% Similarity=0.045 Sum_probs=57.9
Q ss_pred HHhcccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCC--------CCCCce
Q 028410 88 LQGKSLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLP--------FFDEAF 149 (209)
Q Consensus 88 l~~~~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~~~~~f 149 (209)
+.....++++.+||-.|+ |.|..+..+++ .|. +|+++|.+++..+. ...|..+.. .....+
T Consensus 132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCE
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCc
Confidence 334456789999999983 34566666666 576 99999988763321 112222211 123479
Q ss_pred eeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEEe
Q 028410 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 150 D~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
|+++.+.-. ..+....+.|++||+++++-.
T Consensus 211 Dvvid~~g~------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 211 PVVYDGVGQ------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp EEEEESSCG------GGHHHHHTTEEEEEEEEECCC
T ss_pred eEEEECCCh------HHHHHHHHHhcCCCEEEEEec
Confidence 999874221 346778899999999877643
No 366
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=86.64 E-value=0.61 Score=37.74 Aligned_cols=87 Identities=9% Similarity=0.023 Sum_probs=55.1
Q ss_pred cccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCC--------CCCCceeeE
Q 028410 91 KSLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLP--------FFDEAFDVA 152 (209)
Q Consensus 91 ~~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~~~~~fD~i 152 (209)
...++++.+||-.|+ |.|.....++. .|. +|+++|.+++..+. ...|..+.. .....+|++
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~v 213 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVV 213 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEE
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEE
Confidence 456788999999994 34455555555 576 99999988653221 112322211 112469999
Q ss_pred EcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 153 FTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
+.+.- ...++...+.|++||+++.+-
T Consensus 214 i~~~g------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 214 YDSVG------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EECSC------GGGHHHHHHTEEEEEEEEECC
T ss_pred EECCc------hHHHHHHHHHhcCCCEEEEEe
Confidence 87532 234678889999999976654
No 367
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=86.40 E-value=0.24 Score=40.59 Aligned_cols=87 Identities=13% Similarity=0.198 Sum_probs=55.7
Q ss_pred ccCCCCCeEEEEcCC--CChhHHHHHh-c-CCceEEEecCCCCCCcE-------EEcCCCCCC-------CCC-CceeeE
Q 028410 92 SLLFNHSKVLCVSAG--AGHEVMAFNS-I-GVADVTGVELMDSLPLV-------SRADPHNLP-------FFD-EAFDVA 152 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG--~G~~~~~la~-~-~~~~v~~vD~s~~~~~~-------~~~d~~~~~-------~~~-~~fD~i 152 (209)
..++++.+||-.|+| .|..+..+++ . |. +|+++|.+++..+. ...|..+.. ... +.+|++
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 244 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAV 244 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEE
Confidence 456889999999987 3455555555 5 76 89999988763321 111222211 112 479999
Q ss_pred EcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 153 FTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
+.+.- ....+.+..+.|+|||+++++-
T Consensus 245 i~~~g-----~~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 245 IDLNN-----SEKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp EESCC-----CHHHHTTGGGGEEEEEEEEECC
T ss_pred EECCC-----CHHHHHHHHHHHhcCCEEEEEC
Confidence 87421 1345677889999999976653
No 368
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=86.17 E-value=1.5 Score=35.53 Aligned_cols=91 Identities=9% Similarity=0.033 Sum_probs=56.3
Q ss_pred hcccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCCC--------CCCceeeE
Q 028410 90 GKSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLPF--------FDEAFDVA 152 (209)
Q Consensus 90 ~~~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~~--------~~~~fD~i 152 (209)
......++.+||=.|+|. |..+..+++ .|...++++|.+++..++ ...|..+... ....+|+|
T Consensus 154 ~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v 233 (346)
T 4a2c_A 154 HLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLI 233 (346)
T ss_dssp HHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEE
T ss_pred HHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcccc
Confidence 344668899999999864 345555555 577688999998764331 1122222111 12346776
Q ss_pred EcccchhhhCHHHHHHHHHHhcccCcEEEEEEe
Q 028410 153 FTAHLAEALFPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
+... -....+....+.+++||.+++.-.
T Consensus 234 ~d~~-----G~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 234 LETA-----GVPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp EECS-----CSHHHHHHHHHHCCTTCEEEECCC
T ss_pred cccc-----cccchhhhhhheecCCeEEEEEec
Confidence 6521 124557788899999999776543
No 369
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=85.97 E-value=12 Score=30.52 Aligned_cols=88 Identities=7% Similarity=0.106 Sum_probs=58.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc-CCceEEEecCCC-----------------------------------CCCcEEEcC
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMD-----------------------------------SLPLVSRAD 138 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~-----------------------------------~~~~~~~~d 138 (209)
.+...|+.+|||.......+... +...++-+|.-+ .....+-.|
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 46789999999999999998863 434677777411 112255667
Q ss_pred CCCCCC---------CCCceeeEEcccchhhhCH---HHHHHHHHHhcccCcEEEEE
Q 028410 139 PHNLPF---------FDEAFDVAFTAHLAEALFP---SRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 139 ~~~~~~---------~~~~fD~i~~~~~~~~~~~---~~~l~~~~r~LkpgG~lil~ 183 (209)
+.+... ..+...++++-.+..++.+ ..+++.+.+.. |+|.+++.
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~ 231 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISY 231 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEE
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEE
Confidence 766321 2345677777778888855 55666666666 78876544
No 370
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=85.78 E-value=1.1 Score=36.42 Aligned_cols=90 Identities=17% Similarity=0.214 Sum_probs=57.0
Q ss_pred HHhcccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCCC--------CCCce
Q 028410 88 LQGKSLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLPF--------FDEAF 149 (209)
Q Consensus 88 l~~~~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~~--------~~~~f 149 (209)
+.....++++.+||-.|+ |.|.....++. .|. +|+++|.+++..+. ...|..+..+ ....+
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 137 LHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp HHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCE
T ss_pred HHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCC
Confidence 333456788999999995 45566666665 576 99999988753221 1123222111 12468
Q ss_pred eeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 150 D~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
|+++.+.-. ..++...+.|++||+++.+-
T Consensus 216 d~vi~~~g~------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 216 DVVYDSIGK------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEEEECSCT------TTHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCcH------HHHHHHHHhhccCCEEEEEe
Confidence 999874211 34678889999999976654
No 371
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=85.54 E-value=1 Score=36.65 Aligned_cols=90 Identities=10% Similarity=-0.000 Sum_probs=54.0
Q ss_pred cccCCCCCeEEEEcCCCC-hhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCC--------CCCCceeeEE
Q 028410 91 KSLLFNHSKVLCVSAGAG-HEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLP--------FFDEAFDVAF 153 (209)
Q Consensus 91 ~~~~~~~~~iLDiGcG~G-~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~~~~~fD~i~ 153 (209)
....+++.+||=+|+|++ ..+..+++ .+..+|+++|.+++..+. ...|..+.. .....+|.++
T Consensus 158 ~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~ 237 (348)
T 4eez_A 158 VSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAI 237 (348)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEE
T ss_pred ccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEE
Confidence 345689999999999863 34444444 444699999998773321 111222211 1123456555
Q ss_pred cccchhhhCHHHHHHHHHHhcccCcEEEEEEe
Q 028410 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
.... ....+....+.+++||.+++.-.
T Consensus 238 ~~~~-----~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 238 VCAV-----ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp ECCS-----CHHHHHHHHHTEEEEEEEEECCC
T ss_pred Eecc-----CcchhheeheeecCCceEEEEec
Confidence 4221 24567888899999999776643
No 372
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=85.42 E-value=1.3 Score=36.32 Aligned_cols=88 Identities=7% Similarity=-0.023 Sum_probs=54.9
Q ss_pred hcccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCC--------CCCCceee
Q 028410 90 GKSLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLP--------FFDEAFDV 151 (209)
Q Consensus 90 ~~~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~~~~~fD~ 151 (209)
....++++.+||-.|+ |.|..+..++. .|. +|+++|.+++..+. ...|..+.. .....+|+
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 234 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNL 234 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceE
Confidence 4456788999999984 34455555555 576 89999988653321 112222211 11246999
Q ss_pred EEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 152 i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
++.+.-. ..+.+..+.|++||+++++-
T Consensus 235 vi~~~G~------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 235 ILDCIGG------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp EEESSCG------GGHHHHHHHEEEEEEEEECC
T ss_pred EEECCCc------hHHHHHHHhccCCCEEEEEe
Confidence 9874321 13677789999999977654
No 373
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=85.29 E-value=0.28 Score=39.79 Aligned_cols=61 Identities=13% Similarity=0.202 Sum_probs=46.8
Q ss_pred CCCCeEEEEcCCCChhHHHHHhcCCce--EEEecCCCCCC----------cEEEcCCCCCCCC----CCceeeEEcc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSIGVAD--VTGVELMDSLP----------LVSRADPHNLPFF----DEAFDVAFTA 155 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~~~~~--v~~vD~s~~~~----------~~~~~d~~~~~~~----~~~fD~i~~~ 155 (209)
+...+++|+-||.|.....+.+.|... +.++|+++.+. .+..+|+.++... ...+|+++..
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEec
Confidence 567899999999999999888877644 68999987733 2678888876421 1468999874
No 374
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=85.08 E-value=1.8 Score=30.33 Aligned_cols=83 Identities=8% Similarity=-0.060 Sum_probs=51.5
Q ss_pred CCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCC--------CcEEEcCCCCCC----CCCCceeeEEcccchhh
Q 028410 97 HSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSL--------PLVSRADPHNLP----FFDEAFDVAFTAHLAEA 160 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~--------~~~~~~d~~~~~----~~~~~fD~i~~~~~~~~ 160 (209)
..+|+=+|+| ..+..+++ .|. +|+++|.+++. ..++.+|..+.. ..-..+|+++...-..
T Consensus 7 ~~~viIiG~G--~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~- 82 (140)
T 3fwz_A 7 CNHALLVGYG--RVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNG- 82 (140)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCH-
T ss_pred CCCEEEECcC--HHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCCh-
Confidence 4578888875 67776665 466 99999999863 347788887632 1235688887632111
Q ss_pred hCHHHHHHHHHHhcccCcEEEEEE
Q 028410 161 LFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 161 ~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
.....+....+.+.|+..++.-.
T Consensus 83 -~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 83 -YEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp -HHHHHHHHHHHHHCSSSEEEEEE
T ss_pred -HHHHHHHHHHHHHCCCCeEEEEE
Confidence 01222344667778888754433
No 375
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=84.82 E-value=0.72 Score=37.73 Aligned_cols=82 Identities=17% Similarity=0.148 Sum_probs=51.6
Q ss_pred CCCeEEEEc-CC-CChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCC-C-----CCCCCceeeEEcccchh
Q 028410 96 NHSKVLCVS-AG-AGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHN-L-----PFFDEAFDVAFTAHLAE 159 (209)
Q Consensus 96 ~~~~iLDiG-cG-~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~-~-----~~~~~~fD~i~~~~~~~ 159 (209)
++.+||-.| +| .|..+..+++ .|. +|+++|.+++..+. ...|..+ + ....+.+|+++...
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~--- 225 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTF--- 225 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESS---
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECC---
Confidence 889999995 33 3555566666 576 99999987663321 1112211 0 01234689888632
Q ss_pred hhCHHHHHHHHHHhcccCcEEEEE
Q 028410 160 ALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 160 ~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
.....+....+.|++||+++.+
T Consensus 226 --g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 226 --NTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEES
T ss_pred --CchHHHHHHHHHhccCCEEEEE
Confidence 2345678889999999998654
No 376
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=84.63 E-value=0.51 Score=38.21 Aligned_cols=84 Identities=17% Similarity=0.156 Sum_probs=52.6
Q ss_pred cCCCCC-eEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCC------CCCCCceeeEEcc
Q 028410 93 LLFNHS-KVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNL------PFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~-~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~------~~~~~~fD~i~~~ 155 (209)
.++++. +||-.|+ |.|..+..+++ .|. +|++++.+++..+. ...|..+. ....+.+|+++..
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~ 223 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDP 223 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEEC
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEEC
Confidence 456665 8999997 45666667776 575 89999988764321 01111111 1123468998864
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
.-. ..+.+..+.+++||+++++
T Consensus 224 ~g~------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 224 VGG------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp STT------TTHHHHHHTEEEEEEEEEC
T ss_pred CcH------HHHHHHHHhhccCCEEEEE
Confidence 211 2467888999999997765
No 377
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=84.50 E-value=0.46 Score=33.92 Aligned_cols=40 Identities=13% Similarity=0.314 Sum_probs=30.6
Q ss_pred CCCCCceeeEEccc-ch-hhh-CHHHHHHHHHHhcccCcEEEE
Q 028410 143 PFFDEAFDVAFTAH-LA-EAL-FPSRFVGEMERTVKIGGVCMV 182 (209)
Q Consensus 143 ~~~~~~fD~i~~~~-~~-~~~-~~~~~l~~~~r~LkpgG~lil 182 (209)
.+++++||.|+.-. -. .+. .+..++..+.+.|||||.+..
T Consensus 54 sLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 45789999997732 12 223 579999999999999999765
No 378
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=84.14 E-value=1.4 Score=36.14 Aligned_cols=88 Identities=10% Similarity=0.093 Sum_probs=55.0
Q ss_pred hcccCCCC--CeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcE--------EEcCCCCCCC-------CCCce
Q 028410 90 GKSLLFNH--SKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLV--------SRADPHNLPF-------FDEAF 149 (209)
Q Consensus 90 ~~~~~~~~--~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~--------~~~d~~~~~~-------~~~~f 149 (209)
....++++ .+||-.|+ |.|.....++. .|..+|+++|.+++..+. ...|..+..+ ..+.+
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~ 231 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGV 231 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCE
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCC
Confidence 34466888 99999997 33455555555 565589999987642221 1122222110 11268
Q ss_pred eeEEcccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 150 D~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
|+++.+.- ...+....+.|++||+++++
T Consensus 232 d~vi~~~G------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 232 DVYFDNVG------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp EEEEESCC------HHHHHHHHHTEEEEEEEEEC
T ss_pred CEEEECCC------HHHHHHHHHHhccCcEEEEE
Confidence 98887432 25678889999999997765
No 379
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=84.09 E-value=0.59 Score=38.41 Aligned_cols=91 Identities=13% Similarity=0.125 Sum_probs=56.9
Q ss_pred HHHhcccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCCC-------CCCce
Q 028410 87 HLQGKSLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLPF-------FDEAF 149 (209)
Q Consensus 87 ~l~~~~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~~-------~~~~f 149 (209)
.+.....++++.+||-.|+ |.|..+..+++ .|. +|+++|.+++..+. ...|..+..+ ..+.+
T Consensus 158 ~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~ 236 (353)
T 4dup_A 158 NLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGV 236 (353)
T ss_dssp HHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCE
T ss_pred HHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCc
Confidence 3334566789999999953 24566666666 576 89999988763321 1112222111 13469
Q ss_pred eeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 150 D~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
|+++.+.-. ..+....+.|++||+++++-
T Consensus 237 Dvvid~~g~------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 237 DIILDMIGA------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEEEESCCG------GGHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCCH------HHHHHHHHHhccCCEEEEEE
Confidence 999874321 24677889999999977654
No 380
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=82.50 E-value=1 Score=37.08 Aligned_cols=79 Identities=22% Similarity=0.180 Sum_probs=50.1
Q ss_pred CCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCC---CCCc-------EEEcCCCCCCCCC------CceeeEEcccch
Q 028410 97 HSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMD---SLPL-------VSRADPHNLPFFD------EAFDVAFTAHLA 158 (209)
Q Consensus 97 ~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~---~~~~-------~~~~d~~~~~~~~------~~fD~i~~~~~~ 158 (209)
+.+||-+|+|. |..+..+++ .|. +|+++|.++ +..+ -.. | .+ .+.+ +.+|+++.+.-.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~~v-~-~~-~~~~~~~~~~~~~d~vid~~g~ 256 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKTNYY-N-SS-NGYDKLKDSVGKFDVIIDATGA 256 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTCEEE-E-CT-TCSHHHHHHHCCEEEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCCcee-c-hH-HHHHHHHHhCCCCCEEEECCCC
Confidence 89999999842 344444554 576 999999987 4222 112 4 33 2211 468999874211
Q ss_pred hhhCHHHHH-HHHHHhcccCcEEEEEE
Q 028410 159 EALFPSRFV-GEMERTVKIGGVCMVLM 184 (209)
Q Consensus 159 ~~~~~~~~l-~~~~r~LkpgG~lil~~ 184 (209)
...+ +...+.|++||+++.+-
T Consensus 257 -----~~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 257 -----DVNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp -----CTHHHHHHGGGEEEEEEEEECS
T ss_pred -----hHHHHHHHHHHHhcCCEEEEEe
Confidence 1235 78889999999976653
No 381
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=81.92 E-value=0.67 Score=37.54 Aligned_cols=85 Identities=16% Similarity=0.085 Sum_probs=53.4
Q ss_pred cCCCCC-eEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCc---------EEEc---CCCC-CCCCCCceeeEEcc
Q 028410 93 LLFNHS-KVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPL---------VSRA---DPHN-LPFFDEAFDVAFTA 155 (209)
Q Consensus 93 ~~~~~~-~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~---------~~~~---d~~~-~~~~~~~fD~i~~~ 155 (209)
.++++. +||-.|+ |.|..+..+++ .|. +|++++.+++..+ ++.. +... .....+.+|+++..
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~ 224 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDP 224 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEES
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEEC
Confidence 456665 8999997 34566666666 576 7999998876433 1111 1011 11223469998863
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
.- . ..+.+..+.+++||+++++-
T Consensus 225 ~g----~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 225 VG----G--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp CC----T--HHHHHHHTTEEEEEEEEECC
T ss_pred Cc----H--HHHHHHHHhhcCCCEEEEEe
Confidence 21 1 25788899999999977653
No 382
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=81.42 E-value=1.2 Score=35.96 Aligned_cols=79 Identities=16% Similarity=0.191 Sum_probs=51.4
Q ss_pred eEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcEE-------EcCCCC----CCCCCCceeeEEcccchhhhCHH
Q 028410 99 KVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLVS-------RADPHN----LPFFDEAFDVAFTAHLAEALFPS 164 (209)
Q Consensus 99 ~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~~-------~~d~~~----~~~~~~~fD~i~~~~~~~~~~~~ 164 (209)
+||=.|+ |.|..+..+++ .|. +|+++|.+++..++. ..|..+ ..+..+.+|+++...- .
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g------~ 221 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVG------D 221 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSC------H
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCC------c
Confidence 4998886 45677777777 576 999999887744310 111111 1123457898876321 1
Q ss_pred HHHHHHHHhcccCcEEEEEE
Q 028410 165 RFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 165 ~~l~~~~r~LkpgG~lil~~ 184 (209)
..+.+..+.|+|+|+++.+-
T Consensus 222 ~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 222 KVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp HHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCCEEEEEe
Confidence 27889999999999987663
No 383
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=80.86 E-value=1.2 Score=37.86 Aligned_cols=86 Identities=17% Similarity=0.121 Sum_probs=54.6
Q ss_pred ccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCCC-----------------
Q 028410 92 SLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLPF----------------- 144 (209)
Q Consensus 92 ~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~~----------------- 144 (209)
..++++.+||=+|+ |.|..+..+++ .|. ++++++.+++..++ ...|..+..+
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHH
Confidence 46689999999997 34566666776 575 88888876653321 1112211111
Q ss_pred --------CCCceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 145 --------FDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 145 --------~~~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
....+|+++...- . ..+....+.|++||.++++-
T Consensus 303 ~~~i~~~t~g~g~Dvvid~~G-----~-~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFEHPG-----R-ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHTSCCEEEEEECSC-----H-HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHhCCCCCcEEEEcCC-----c-hhHHHHHHHhhCCcEEEEEe
Confidence 1247898876321 1 46788889999999977653
No 384
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=80.82 E-value=9 Score=26.35 Aligned_cols=56 Identities=13% Similarity=0.091 Sum_probs=38.8
Q ss_pred CCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCC--------CcEEEcCCCCCC----CCCCceeeEEcc
Q 028410 97 HSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSL--------PLVSRADPHNLP----FFDEAFDVAFTA 155 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~--------~~~~~~d~~~~~----~~~~~fD~i~~~ 155 (209)
..+|+=+|+| ..+..+++ .|+ +|+++|.+++. ..++.+|..+.. ..-..+|+++..
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 4578888884 67777765 466 99999998763 346778887632 123568888773
No 385
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=80.09 E-value=0.82 Score=37.59 Aligned_cols=86 Identities=12% Similarity=0.064 Sum_probs=51.1
Q ss_pred cCC-CCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcEEE--------cCCCCC---CCCCCceeeEEcccch
Q 028410 93 LLF-NHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLVSR--------ADPHNL---PFFDEAFDVAFTAHLA 158 (209)
Q Consensus 93 ~~~-~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~~~--------~d~~~~---~~~~~~fD~i~~~~~~ 158 (209)
.+. ++.+||-+|+|. |..+..+++ .|. +|+++|.+++..+... .|..+. .-..+.+|+++...-.
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~ 254 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPV 254 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCS
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCC
Confidence 456 899999998752 445555555 476 8999999876433211 111110 0001358998863211
Q ss_pred hhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 159 EALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 159 ~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
...+....+.|+|||+++.+-
T Consensus 255 -----~~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 255 -----HHALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp -----CCCSHHHHTTEEEEEEEEECS
T ss_pred -----hHHHHHHHHHhccCCEEEEeC
Confidence 112456778999999976653
No 386
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=79.83 E-value=6.3 Score=28.61 Aligned_cols=83 Identities=14% Similarity=0.085 Sum_probs=49.6
Q ss_pred CCeEEEEcCCCChhHHHHHh----c-CCceEEEecCCCCC--------CcEEEcCCCCCC----C-CCCceeeEEcccch
Q 028410 97 HSKVLCVSAGAGHEVMAFNS----I-GVADVTGVELMDSL--------PLVSRADPHNLP----F-FDEAFDVAFTAHLA 158 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~----~-~~~~v~~vD~s~~~--------~~~~~~d~~~~~----~-~~~~fD~i~~~~~~ 158 (209)
+.+|+=+|+| ..+..+++ . |. +|+++|.+++. ..++.+|..+.. . .-..+|+|+...-.
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 5688888875 66666654 4 65 89999998763 345677776521 1 23468888873211
Q ss_pred hhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 159 EALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 159 ~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
. .....+....+.+.|++.++...
T Consensus 116 ~--~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 116 H--QGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp H--HHHHHHHHHHHHTTCCSEEEEEE
T ss_pred h--HHHHHHHHHHHHHCCCCEEEEEE
Confidence 1 11222334556667777765543
No 387
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=78.47 E-value=6.4 Score=33.20 Aligned_cols=85 Identities=12% Similarity=-0.063 Sum_probs=54.9
Q ss_pred CCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCC--------CcEEEcCCCCCC----CCCCceeeEEcccchh
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSL--------PLVSRADPHNLP----FFDEAFDVAFTAHLAE 159 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~--------~~~~~~d~~~~~----~~~~~fD~i~~~~~~~ 159 (209)
.+.+|+=+|+ |.++..+++ .|. .|+.+|.+++. ..++.+|+.+.. ..-...|++++..-.
T Consensus 3 ~~~~viIiG~--Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~- 78 (413)
T 3l9w_A 3 HGMRVIIAGF--GRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDD- 78 (413)
T ss_dssp -CCSEEEECC--SHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSS-
T ss_pred CCCeEEEECC--CHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCC-
Confidence 3467888887 478777766 365 99999999873 347889988842 233568888763211
Q ss_pred hhCHHHHHHHHHHhcccCcEEEEEEe
Q 028410 160 ALFPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 160 ~~~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
......+....|.+.|+..++.-..
T Consensus 79 -~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 79 -PQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp -HHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred -hHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 1123445666777888877554443
No 388
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=77.94 E-value=10 Score=28.43 Aligned_cols=68 Identities=15% Similarity=0.097 Sum_probs=41.4
Q ss_pred CCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEEcCCCCCCCCCCceeeEEcccchhhhCHHHHHHHHH
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEME 171 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~~l~~~~ 171 (209)
...+|.=+|+| ..+..++. .|. +|+.+|.+++ .-...|+|+..--. .....++.++.
T Consensus 18 ~~~~I~iiG~G--~mG~~la~~l~~~g~-~V~~~~~~~~--------------~~~~aD~vi~av~~--~~~~~v~~~l~ 78 (209)
T 2raf_A 18 QGMEITIFGKG--NMGQAIGHNFEIAGH-EVTYYGSKDQ--------------ATTLGEIVIMAVPY--PALAALAKQYA 78 (209)
T ss_dssp --CEEEEECCS--HHHHHHHHHHHHTTC-EEEEECTTCC--------------CSSCCSEEEECSCH--HHHHHHHHHTH
T ss_pred CCCEEEEECCC--HHHHHHHHHHHHCCC-EEEEEcCCHH--------------HhccCCEEEEcCCc--HHHHHHHHHHH
Confidence 45688889876 55555544 465 8999998766 12357888774221 12456677777
Q ss_pred HhcccCcEEEEEE
Q 028410 172 RTVKIGGVCMVLM 184 (209)
Q Consensus 172 r~LkpgG~lil~~ 184 (209)
..++ |.. ++.+
T Consensus 79 ~~~~-~~~-vi~~ 89 (209)
T 2raf_A 79 TQLK-GKI-VVDI 89 (209)
T ss_dssp HHHT-TSE-EEEC
T ss_pred HhcC-CCE-EEEE
Confidence 7777 544 4443
No 389
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=77.45 E-value=22 Score=27.31 Aligned_cols=53 Identities=8% Similarity=-0.015 Sum_probs=41.9
Q ss_pred CeEEEEcCCCChhHHHHHh----cCCceEEEecCCCC--------CCcEEEcCCCCCCCCCCceeeEEcc
Q 028410 98 SKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDS--------LPLVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 98 ~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~--------~~~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
++||=.|+ |..+.++++ .|+ +|++++.++. .++++.+|+.++. -..+|+|+..
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~ 70 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLIS 70 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEEC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEEC
Confidence 68999994 899888876 366 8999998764 3467889998866 5678999875
No 390
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=75.73 E-value=9.8 Score=30.94 Aligned_cols=88 Identities=16% Similarity=0.135 Sum_probs=50.7
Q ss_pred hcccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCC------C------cEEEc------CCCCCCCCCCc
Q 028410 90 GKSLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSL------P------LVSRA------DPHNLPFFDEA 148 (209)
Q Consensus 90 ~~~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~------~------~~~~~------d~~~~~~~~~~ 148 (209)
....++++.+||-+|+ |.|..+..+++ .|...+..++.++.. . .++.. ++.+..-..+.
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~ 240 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQ 240 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCC
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCC
Confidence 3456789999999997 45677777777 576455566654420 1 12211 11111111114
Q ss_pred eeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 149 FDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 149 fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
+|+|+-.-- ... ..+..+.|+|||+++.+
T Consensus 241 ~Dvvid~~g-----~~~-~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 241 PRLALNCVG-----GKS-STELLRQLARGGTMVTY 269 (357)
T ss_dssp CSEEEESSC-----HHH-HHHHHTTSCTTCEEEEC
T ss_pred ceEEEECCC-----cHH-HHHHHHhhCCCCEEEEE
Confidence 888876321 112 24578999999998765
No 391
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=75.69 E-value=11 Score=26.37 Aligned_cols=84 Identities=8% Similarity=-0.012 Sum_probs=52.3
Q ss_pred CCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCC------------CCcEEEcCCCCCC----CCCCceeeEEccc
Q 028410 97 HSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDS------------LPLVSRADPHNLP----FFDEAFDVAFTAH 156 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~------------~~~~~~~d~~~~~----~~~~~fD~i~~~~ 156 (209)
..+|+=+|+ |..+..+++ .|. +|+.+|.++. ...++.+|..+.. ..-...|++++..
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 346777775 688888766 365 8999998741 3568889987632 1235678887742
Q ss_pred chhhhCHHHHHHHHHHhcccCcEEEEEEe
Q 028410 157 LAEALFPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 157 ~~~~~~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
-.. .....+....+.+.|...++....
T Consensus 80 ~~d--~~n~~~~~~a~~~~~~~~ii~~~~ 106 (153)
T 1id1_A 80 DND--ADNAFVVLSAKDMSSDVKTVLAVS 106 (153)
T ss_dssp SCH--HHHHHHHHHHHHHTSSSCEEEECS
T ss_pred CCh--HHHHHHHHHHHHHCCCCEEEEEEC
Confidence 111 123445566677777777555443
No 392
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=75.62 E-value=1.4 Score=36.36 Aligned_cols=86 Identities=16% Similarity=0.051 Sum_probs=50.7
Q ss_pred cCC-CCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcEE--------EcCCCCCC---CCCCceeeEEcccch
Q 028410 93 LLF-NHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLVS--------RADPHNLP---FFDEAFDVAFTAHLA 158 (209)
Q Consensus 93 ~~~-~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~~--------~~d~~~~~---~~~~~fD~i~~~~~~ 158 (209)
.+. ++.+||-+|+|. |..+..+++ .|. +|+++|.+++..+.. ..|..+.. -..+.+|+|+...-.
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~ 261 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSA 261 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCc
Confidence 345 889999999752 444555555 576 899999887643211 11211100 001368999874211
Q ss_pred hhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 159 EALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 159 ~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
. ..++...+.+++||+++.+-
T Consensus 262 ~-----~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 262 V-----HPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp C-----CCSHHHHHHEEEEEEEEECC
T ss_pred H-----HHHHHHHHHHhcCCEEEEEc
Confidence 1 12456778999999976653
No 393
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=74.55 E-value=18 Score=25.30 Aligned_cols=86 Identities=12% Similarity=0.000 Sum_probs=47.7
Q ss_pred CCCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCc---------EEEcCCCCCC----CCCCceeeEEcccc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPL---------VSRADPHNLP----FFDEAFDVAFTAHL 157 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~---------~~~~d~~~~~----~~~~~fD~i~~~~~ 157 (209)
.++.+|+=+|+ |..+..+++ .|. +|+.+|.+++..+ ++.+|..+.. ..-..+|+|+...-
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN 93 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred cCCCcEEEECC--CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence 56789999987 476666654 465 8999998865322 3445544311 11245788877421
Q ss_pred hhhhCHHHHHHHHHHhcccCcEEEEEEe
Q 028410 158 AEALFPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 158 ~~~~~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
.. .....+.++.+.+.+...++....
T Consensus 94 ~~--~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 94 DD--STNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp CH--HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred Cc--HHHHHHHHHHHHHCCCCeEEEEEC
Confidence 11 122333444555555555444443
No 394
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=73.08 E-value=1.9 Score=34.63 Aligned_cols=44 Identities=18% Similarity=0.283 Sum_probs=31.4
Q ss_pred chhhh-CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccc
Q 028410 157 LAEAL-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (209)
Q Consensus 157 ~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~ 202 (209)
+...+ ....++....++|+|||+++++...+ -+-+.++..|+.+
T Consensus 205 VN~EL~~L~~~L~~a~~~L~~gGrl~visfHS--LEDRiVK~~~~~~ 249 (285)
T 1wg8_A 205 VNDELNALKEFLEQAAEVLAPGGRLVVIAFHS--LEDRVVKRFLRES 249 (285)
T ss_dssp HTTHHHHHHHHHHHHHHHEEEEEEEEEEECSH--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEEEecCc--HHHHHHHHHHHhC
Confidence 44445 56889999999999999998887763 3444455566543
No 395
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=72.96 E-value=4.6 Score=29.57 Aligned_cols=85 Identities=14% Similarity=0.109 Sum_probs=53.2
Q ss_pred CCCCeEEEEcCCCChhHHHHHh-cCCceEEEecCCCC--------CCcEEEcCCCC-CCC----CCCceeeEEcccchhh
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDS--------LPLVSRADPHN-LPF----FDEAFDVAFTAHLAEA 160 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~-~~~~~v~~vD~s~~--------~~~~~~~d~~~-~~~----~~~~fD~i~~~~~~~~ 160 (209)
.-..-|||+|-|.|+.=.++.+ .+..+|+.+|-.-. .-.+++||+.+ ++. -..+.-++... +-.+
T Consensus 39 ~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~tL~~~~~r~g~~a~LaHaD-~G~g 117 (174)
T 3iht_A 39 GLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPPEAQLILGDIRETLPATLERFGATASLVHAD-LGGH 117 (174)
T ss_dssp TCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCCGGGEEESCHHHHHHHHHHHHCSCEEEEEEC-CCCS
T ss_pred CCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCchHheecccHHHHHHHHHHhcCCceEEEEee-cCCC
Confidence 5678899999999999999999 57779999986533 22378888766 221 12233333321 1111
Q ss_pred h---C---HHHHHHHHHHhcccCcEE
Q 028410 161 L---F---PSRFVGEMERTVKIGGVC 180 (209)
Q Consensus 161 ~---~---~~~~l~~~~r~LkpgG~l 180 (209)
. | ...+-.-+..+|.|||.+
T Consensus 118 ~~~~d~a~a~~lsplI~~~la~GGi~ 143 (174)
T 3iht_A 118 NREKNDRFARLISPLIEPHLAQGGLM 143 (174)
T ss_dssp CHHHHHHHHHHHHHHHGGGEEEEEEE
T ss_pred CcchhHHHHHhhhHHHHHHhcCCcEE
Confidence 1 1 122224566889999973
No 396
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=72.93 E-value=1.9 Score=35.13 Aligned_cols=88 Identities=16% Similarity=0.127 Sum_probs=55.5
Q ss_pred HHhcccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCc--------EEEcCCCCCC------CCCCcee
Q 028410 88 LQGKSLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPL--------VSRADPHNLP------FFDEAFD 150 (209)
Q Consensus 88 l~~~~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~--------~~~~d~~~~~------~~~~~fD 150 (209)
+.....++++.+||-+|+ |.|..+..+++ .|. +|+++ .+++..+ .+. +-.+.. .....+|
T Consensus 142 l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 142 LVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp HTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEE
T ss_pred HHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCce
Confidence 334566789999999994 34666666776 576 88888 6655322 211 111110 1224699
Q ss_pred eEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 151 VAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 151 ~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
+++.+.- ...+....+.|++||.++.+.
T Consensus 219 ~vid~~g------~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 219 LVYDTLG------GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEEESSC------THHHHHHHHHEEEEEEEEESC
T ss_pred EEEECCC------cHHHHHHHHHHhcCCeEEEEc
Confidence 9886321 145788889999999977653
No 397
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=72.46 E-value=3.5 Score=33.98 Aligned_cols=82 Identities=11% Similarity=-0.025 Sum_probs=51.2
Q ss_pred CCCCeEEEEcCC--CChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCC-------CCCCceeeEEcccc
Q 028410 95 FNHSKVLCVSAG--AGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLP-------FFDEAFDVAFTAHL 157 (209)
Q Consensus 95 ~~~~~iLDiGcG--~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~-------~~~~~fD~i~~~~~ 157 (209)
+++.+||=+|++ .|..+..+++ .|. +|+++. +++..++ ...|..+.. ..++.+|+++-.--
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g 240 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCIT 240 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCC
Confidence 788999999983 5778888887 576 788874 6553321 111222111 11245888876311
Q ss_pred hhhhCHHHHHHHHHHhc-ccCcEEEEE
Q 028410 158 AEALFPSRFVGEMERTV-KIGGVCMVL 183 (209)
Q Consensus 158 ~~~~~~~~~l~~~~r~L-kpgG~lil~ 183 (209)
....+....+.| ++||+++.+
T Consensus 241 -----~~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 241 -----NVESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp -----SHHHHHHHHHHSCTTCEEEEES
T ss_pred -----chHHHHHHHHHhhcCCCEEEEE
Confidence 234567788888 699997765
No 398
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=71.53 E-value=5 Score=32.14 Aligned_cols=102 Identities=14% Similarity=0.065 Sum_probs=49.8
Q ss_pred eEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEEc-CC---CCCCCCCCceeeEEcccchhhhCHHHHHHHH
Q 028410 99 KVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSRA-DP---HNLPFFDEAFDVAFTAHLAEALFPSRFVGEM 170 (209)
Q Consensus 99 ~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~~-d~---~~~~~~~~~fD~i~~~~~~~~~~~~~~l~~~ 170 (209)
+|-=||.| ..+..++. .|+ +|++.|.+++..+-... .+ .+..---..-|+|++.-.....-...+..++
T Consensus 7 kIgfIGLG--~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~ 83 (297)
T 4gbj_A 7 KIAFLGLG--NLGTPIAEILLEAGY-ELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMEL 83 (297)
T ss_dssp EEEEECCS--TTHHHHHHHHHHTTC-EEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHH
T ss_pred cEEEEecH--HHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHH
Confidence 57777766 55555554 477 99999999876542110 00 0111112456888774211111011223557
Q ss_pred HHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 171 ERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 171 ~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
...+++|+.+ +-.........+.+.+.+...++
T Consensus 84 ~~~~~~~~ii-id~sT~~p~~~~~~~~~~~~~g~ 116 (297)
T 4gbj_A 84 VEKLGKDGVH-VSMSTISPETSRQLAQVHEWYGA 116 (297)
T ss_dssp HHHHCTTCEE-EECSCCCHHHHHHHHHHHHHTTC
T ss_pred HhhcCCCeEE-EECCCCChHHHHHHHHHHHhcCC
Confidence 7888998864 34444455566667776665553
No 399
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=71.29 E-value=4.4 Score=32.95 Aligned_cols=89 Identities=19% Similarity=0.112 Sum_probs=51.1
Q ss_pred HHhcccCCCCCeEEEEcCC--CChhHHHHHh-cCCceEEEecCCCCCCc--------EEEcCCCCC-----CCCCCceee
Q 028410 88 LQGKSLLFNHSKVLCVSAG--AGHEVMAFNS-IGVADVTGVELMDSLPL--------VSRADPHNL-----PFFDEAFDV 151 (209)
Q Consensus 88 l~~~~~~~~~~~iLDiGcG--~G~~~~~la~-~~~~~v~~vD~s~~~~~--------~~~~d~~~~-----~~~~~~fD~ 151 (209)
+.....++++.+||=.|++ .|..+..+++ .|..+|++++ ++...+ ++. +-.++ ....+.+|+
T Consensus 134 l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~~ga~~~~~-~~~~~~~~~~~~~~~g~Dv 211 (349)
T 4a27_A 134 LFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIKDSVTHLFD-RNADYVQEVKRISAEGVDI 211 (349)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHGGGSSEEEE-TTSCHHHHHHHHCTTCEEE
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHHcCCcEEEc-CCccHHHHHHHhcCCCceE
Confidence 3345667899999999983 3566667776 4545888887 433221 111 11111 012357999
Q ss_pred EEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 152 i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
++...- . ..+....+.|++||+++++-
T Consensus 212 v~d~~g-----~-~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 212 VLDCLC-----G-DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEECC-------------CTTEEEEEEEEEEC
T ss_pred EEECCC-----c-hhHHHHHHHhhcCCEEEEEC
Confidence 986321 1 12367789999999987664
No 400
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=70.65 E-value=1.9 Score=36.51 Aligned_cols=86 Identities=14% Similarity=-0.003 Sum_probs=52.9
Q ss_pred ccCCCCCeEEEEcCC--CChhHHHHHh-cCCceEEEecCCCCCCcE---------EEc---CCCCC--------------
Q 028410 92 SLLFNHSKVLCVSAG--AGHEVMAFNS-IGVADVTGVELMDSLPLV---------SRA---DPHNL-------------- 142 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG--~G~~~~~la~-~~~~~v~~vD~s~~~~~~---------~~~---d~~~~-------------- 142 (209)
..++++.+||-.|++ -|..+..+++ .|. ++++++.+++..+. +.. |..+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 294 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRK 294 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhH
Confidence 567899999999972 3566666666 575 88888877653321 110 11000
Q ss_pred ------CCCCCceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 143 ------PFFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 143 ------~~~~~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
......+|+++.+.- ...+....+.+++||.++.+-
T Consensus 295 ~~~~v~~~~g~g~Dvvid~~G------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 295 LAKLVVEKAGREPDIVFEHTG------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHSSCCSEEEECSC------HHHHHHHHHHSCTTCEEEESC
T ss_pred HHHHHHHHhCCCceEEEECCC------chHHHHHHHHHhcCCEEEEEe
Confidence 000245888876321 135678889999999977654
No 401
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=70.26 E-value=2.7 Score=33.80 Aligned_cols=86 Identities=14% Similarity=0.092 Sum_probs=51.6
Q ss_pred hcccCCCCCeEEEEc-CC-CChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCC-C--CCCceeeEEccc
Q 028410 90 GKSLLFNHSKVLCVS-AG-AGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLP-F--FDEAFDVAFTAH 156 (209)
Q Consensus 90 ~~~~~~~~~~iLDiG-cG-~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~-~--~~~~fD~i~~~~ 156 (209)
....++++.+||=+| +| .|..+..+++ .|. +|++++.+++ .++ ...|..+.. + .-..+|+++...
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~~~~-~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~ 223 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTASKRN-HAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLV 223 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEECHHH-HHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESS
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeccch-HHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECC
Confidence 445678999999996 44 4666667776 576 8888863332 221 011221111 1 114689887632
Q ss_pred chhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 157 LAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 157 ~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
- ... +....+.|++||+++.+
T Consensus 224 g-----~~~-~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 224 G-----GDV-GIQSIDCLKETGCIVSV 244 (321)
T ss_dssp C-----HHH-HHHHGGGEEEEEEEEEC
T ss_pred C-----cHH-HHHHHHhccCCCEEEEe
Confidence 1 222 37788999999997765
No 402
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=68.56 E-value=30 Score=26.34 Aligned_cols=88 Identities=7% Similarity=-0.033 Sum_probs=52.4
Q ss_pred CCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCc--EEEcCCCCCC----------CCCCceeeEEcccc---
Q 028410 97 HSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPL--VSRADPHNLP----------FFDEAFDVAFTAHL--- 157 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~--~~~~d~~~~~----------~~~~~fD~i~~~~~--- 157 (209)
+.+||=.|++ |..+.++++ .|. +|+.+|.++.... .+..|+.+.. -..+.+|+++.+.-
T Consensus 22 ~k~vlITGas-~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~ 99 (251)
T 3orf_A 22 SKNILVLGGS-GALGAEVVKFFKSKSW-NTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWS 99 (251)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 5678888866 455555544 576 8999998876543 3445544421 12257899988521
Q ss_pred ----hhhh---C-----------HHHHHHHHHHhcccCcEEEEEEec
Q 028410 158 ----AEAL---F-----------PSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 158 ----~~~~---~-----------~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
.... + +..+.+.+.+.++++|.++.+...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~ 146 (251)
T 3orf_A 100 GGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGAS 146 (251)
T ss_dssp CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred CCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEech
Confidence 1111 1 123456667777788887776544
No 403
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=67.42 E-value=3 Score=34.43 Aligned_cols=42 Identities=12% Similarity=0.100 Sum_probs=29.4
Q ss_pred chhhh-CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhc
Q 028410 157 LAEAL-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (209)
Q Consensus 157 ~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~ 200 (209)
|...+ ....+|..+.++|+|||+++++...+ -+-+.++..|+
T Consensus 246 VN~EL~~L~~~L~~a~~~L~~gGRl~VISFHS--LEDRiVK~~f~ 288 (347)
T 3tka_A 246 VNSELEEIEQALKSSLNVLAPGGRLSIISFHS--LEDRIVKRFMR 288 (347)
T ss_dssp HHTHHHHHHHHHHHHHHHEEEEEEEEEEESSH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEEecCc--hhHHHHHHHHH
Confidence 44444 46888999999999999998888764 23333444444
No 404
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=66.94 E-value=4.5 Score=33.30 Aligned_cols=85 Identities=15% Similarity=0.043 Sum_probs=50.2
Q ss_pred CCCCCeEEEEcC-C-CChhHHHHHh-cCCceEEEecCCCCCCcE-------EEcCCCCCCC-----CCCceeeEEcccch
Q 028410 94 LFNHSKVLCVSA-G-AGHEVMAFNS-IGVADVTGVELMDSLPLV-------SRADPHNLPF-----FDEAFDVAFTAHLA 158 (209)
Q Consensus 94 ~~~~~~iLDiGc-G-~G~~~~~la~-~~~~~v~~vD~s~~~~~~-------~~~d~~~~~~-----~~~~fD~i~~~~~~ 158 (209)
++++.+||-.|+ | .|..+..+++ .|. +|++++ +++..+. ...|..+..+ ....+|+++...-
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g- 257 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVG- 257 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSC-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCC-
Confidence 688999999983 3 4566666666 575 898888 5543221 1112221111 1146888876321
Q ss_pred hhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 159 EALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 159 ~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
.+...+....+.+++||+++.+-
T Consensus 258 ---~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 258 ---GSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp ---TTHHHHGGGGBCSSSCCEEEESC
T ss_pred ---ChhhhhHHHHHhhcCCcEEEEeC
Confidence 12234566778899999976553
No 405
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=66.89 E-value=34 Score=24.89 Aligned_cols=85 Identities=12% Similarity=-0.015 Sum_probs=52.1
Q ss_pred CeEEEEcCCCChhHHHHHh----cCCceEEEecCCCC-------CCcEEEcCCCCCCC-CCCceeeEEcccchh--hh-C
Q 028410 98 SKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDS-------LPLVSRADPHNLPF-FDEAFDVAFTAHLAE--AL-F 162 (209)
Q Consensus 98 ~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~-------~~~~~~~d~~~~~~-~~~~fD~i~~~~~~~--~~-~ 162 (209)
++||=.| |+|..+..+++ .|+ +|++++.++. .+.++.+|+.+... .-..+|+|+...-.. .. .
T Consensus 1 MkvlVtG-atG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~ 78 (221)
T 3ew7_A 1 MKIGIIG-ATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEK 78 (221)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTS
T ss_pred CeEEEEc-CCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCCccccch
Confidence 3677777 46777777765 475 9999998763 56688888876532 114579998752111 11 2
Q ss_pred HHHHHHHHHHhccc--CcEEEEEE
Q 028410 163 PSRFVGEMERTVKI--GGVCMVLM 184 (209)
Q Consensus 163 ~~~~l~~~~r~Lkp--gG~lil~~ 184 (209)
.......+.+.++. .++++++.
T Consensus 79 ~~~~~~~l~~a~~~~~~~~~v~~S 102 (221)
T 3ew7_A 79 HVTSLDHLISVLNGTVSPRLLVVG 102 (221)
T ss_dssp HHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCceEEEEe
Confidence 34455666666655 35665553
No 406
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=66.69 E-value=24 Score=23.66 Aligned_cols=81 Identities=12% Similarity=0.096 Sum_probs=46.9
Q ss_pred CCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCC---------CcEEEcCCCCCC----CCCCceeeEEcccchh
Q 028410 97 HSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSL---------PLVSRADPHNLP----FFDEAFDVAFTAHLAE 159 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~---------~~~~~~d~~~~~----~~~~~fD~i~~~~~~~ 159 (209)
+++|+=+|+ |..+..+++ .|. +|+.+|.+++. ..++.+|..+.. ..-..+|+|+...-..
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 80 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE 80 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc
Confidence 468888876 577776655 365 89999987652 224566665421 1134689888742111
Q ss_pred hhCHHHHHHHHHHhcccCcEEEEE
Q 028410 160 ALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 160 ~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
.....+.++.+.++++ .++..
T Consensus 81 --~~~~~~~~~~~~~~~~-~ii~~ 101 (140)
T 1lss_A 81 --EVNLMSSLLAKSYGIN-KTIAR 101 (140)
T ss_dssp --HHHHHHHHHHHHTTCC-CEEEE
T ss_pred --hHHHHHHHHHHHcCCC-EEEEE
Confidence 1223455566667775 44443
No 407
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=65.72 E-value=43 Score=25.67 Aligned_cols=56 Identities=18% Similarity=0.105 Sum_probs=40.4
Q ss_pred CCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCC----CCcEEEcCCCCCC----CCCCceeeEEcc
Q 028410 97 HSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDS----LPLVSRADPHNLP----FFDEAFDVAFTA 155 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~----~~~~~~~d~~~~~----~~~~~fD~i~~~ 155 (209)
.++||=.| . |..+..+++ .|+ +|++++.++. .+.++.+|+.+.. ...+.+|+|+..
T Consensus 3 ~~~ilVtG-a-G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~ 70 (286)
T 3gpi_A 3 LSKILIAG-C-GDLGLELARRLTAQGH-EVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYC 70 (286)
T ss_dssp CCCEEEEC-C-SHHHHHHHHHHHHTTC-CEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEEC
T ss_pred CCcEEEEC-C-CHHHHHHHHHHHHCCC-EEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEe
Confidence 35788888 3 888888876 366 8999988754 4568889987743 122358999874
No 408
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=65.10 E-value=10 Score=31.78 Aligned_cols=36 Identities=14% Similarity=0.120 Sum_probs=26.9
Q ss_pred CCCCeEEEEcCCCChhHHHHHh----c----CCceEEEecCCCC
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS----I----GVADVTGVELMDS 130 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~----~----~~~~v~~vD~s~~ 130 (209)
..+..|+|+|+|+|.++..+.+ . ...+++.||+|+.
T Consensus 79 p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~ 122 (387)
T 1zkd_A 79 PQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPV 122 (387)
T ss_dssp CSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHH
T ss_pred CCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHH
Confidence 3456899999999999877653 1 1237899999883
No 409
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=64.73 E-value=5.2 Score=30.92 Aligned_cols=89 Identities=16% Similarity=0.086 Sum_probs=53.6
Q ss_pred CCCeEEEEcCCCChhHHHH----HhcCCceEEEecCCCCC-----------CcEEEcCCCCCCC----------CCCcee
Q 028410 96 NHSKVLCVSAGAGHEVMAF----NSIGVADVTGVELMDSL-----------PLVSRADPHNLPF----------FDEAFD 150 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~l----a~~~~~~v~~vD~s~~~-----------~~~~~~d~~~~~~----------~~~~fD 150 (209)
.+.++|=.|++.| .+..+ ++.|. +|+.+|.+++. +.++..|+.+..- .-+..|
T Consensus 7 ~gk~~lVTGas~g-IG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 7 QGKKAIVIGGTHG-MGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 4678888886654 44444 44576 89999987652 3467788876421 114789
Q ss_pred eEEccc-ch-----hhhCH--------------HHHHHHHHHhcccCcEEEEEEec
Q 028410 151 VAFTAH-LA-----EALFP--------------SRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 151 ~i~~~~-~~-----~~~~~--------------~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+++.+. +. ...++ ..+.+.+.+.++++|.++.+...
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 140 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSV 140 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECCh
Confidence 998752 10 01111 23445666677778887666543
No 410
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=64.29 E-value=3.9 Score=32.51 Aligned_cols=88 Identities=9% Similarity=0.004 Sum_probs=51.5
Q ss_pred CeEEEEcCCC--ChhHHHHHhcCCceEEEecCCCCCCcEEEcCCCCCC-------CC--CCceeeEEcccchhhhCHHHH
Q 028410 98 SKVLCVSAGA--GHEVMAFNSIGVADVTGVELMDSLPLVSRADPHNLP-------FF--DEAFDVAFTAHLAEALFPSRF 166 (209)
Q Consensus 98 ~~iLDiGcG~--G~~~~~la~~~~~~v~~vD~s~~~~~~~~~d~~~~~-------~~--~~~fD~i~~~~~~~~~~~~~~ 166 (209)
++|+=+|+|. +.++..|++.|. +|+.++.+++.++....+- ..+ .. ...+|+|+..- ...+..++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~D~vilav--k~~~~~~~ 78 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLP-HTTLIGRHAKTITYYTVPH-APAQDIVVKGYEDVTNTFDVIIIAV--KTHQLDAV 78 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCT-TCEEEESSCEEEEEESSTT-SCCEEEEEEEGGGCCSCEEEEEECS--CGGGHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeccCcEEEEecCC-eeccceecCchHhcCCCCCEEEEeC--CccCHHHH
Confidence 5788888873 233334444565 8888888865444321111 010 11 25689988732 22245677
Q ss_pred HHHHHHhcccCcEEEEEEecCCc
Q 028410 167 VGEMERTVKIGGVCMVLMEECAG 189 (209)
Q Consensus 167 l~~~~r~LkpgG~lil~~~~~~~ 189 (209)
++++...++++..++.+.+..+.
T Consensus 79 l~~l~~~l~~~~~iv~~~nGi~~ 101 (294)
T 3g17_A 79 IPHLTYLAHEDTLIILAQNGYGQ 101 (294)
T ss_dssp GGGHHHHEEEEEEEEECCSSCCC
T ss_pred HHHHHHhhCCCCEEEEeccCccc
Confidence 88888889888776665555443
No 411
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=63.68 E-value=34 Score=27.42 Aligned_cols=97 Identities=10% Similarity=0.086 Sum_probs=55.4
Q ss_pred CCeEEEEcCCCChhHHHHHh----cCC-ceEEEecCCCCCCc---------EEEcCCCCCCCCCCceeeEEcccchhhhC
Q 028410 97 HSKVLCVSAGAGHEVMAFNS----IGV-ADVTGVELMDSLPL---------VSRADPHNLPFFDEAFDVAFTAHLAEALF 162 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~----~~~-~~v~~vD~s~~~~~---------~~~~d~~~~~~~~~~fD~i~~~~~~~~~~ 162 (209)
..+|.=||+| ..+..++. .|. .+|+++|.+++..+ ....|..+. .-...|+|+..--.. .
T Consensus 33 ~~kI~IIG~G--~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~--~~~~aDvVilavp~~--~ 106 (314)
T 3ggo_A 33 MQNVLIVGVG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKV--EDFSPDFVMLSSPVR--T 106 (314)
T ss_dssp CSEEEEESCS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGG--GGGCCSEEEECSCGG--G
T ss_pred CCEEEEEeeC--HHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHH--hhccCCEEEEeCCHH--H
Confidence 3689999876 55555544 454 28999999876332 112222210 124578888742221 2
Q ss_pred HHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhc
Q 028410 163 PSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (209)
Q Consensus 163 ~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~ 200 (209)
..+++.++...++||..++ .+..........+.+.+.
T Consensus 107 ~~~vl~~l~~~l~~~~iv~-d~~Svk~~~~~~~~~~l~ 143 (314)
T 3ggo_A 107 FREIAKKLSYILSEDATVT-DQGSVKGKLVYDLENILG 143 (314)
T ss_dssp HHHHHHHHHHHSCTTCEEE-ECCSCCTHHHHHHHHHHG
T ss_pred HHHHHHHHhhccCCCcEEE-ECCCCcHHHHHHHHHhcC
Confidence 4667888999999987643 333322233455555554
No 412
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=63.50 E-value=7.5 Score=30.27 Aligned_cols=83 Identities=16% Similarity=0.069 Sum_probs=48.8
Q ss_pred eEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEEcCC---C--------CCCCCCCceeeEEcccchhhhCH
Q 028410 99 KVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSRADP---H--------NLPFFDEAFDVAFTAHLAEALFP 163 (209)
Q Consensus 99 ~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~~d~---~--------~~~~~~~~fD~i~~~~~~~~~~~ 163 (209)
+|.=+|+| ..+..++. .|+ +|+.+|.+++..+-+...- . +.+-.-...|+|+..--.. ..
T Consensus 2 ~i~iiG~G--~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~--~~ 76 (291)
T 1ks9_A 2 KITVLGCG--ALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW--QV 76 (291)
T ss_dssp EEEEECCS--HHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG--GH
T ss_pred eEEEECcC--HHHHHHHHHHHhCCC-CEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH--hH
Confidence 57778875 55555443 466 8999999887554322110 0 0000013478887742222 24
Q ss_pred HHHHHHHHHhcccCcEEEEEEec
Q 028410 164 SRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 164 ~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
..+++++...++|+..++.+...
T Consensus 77 ~~v~~~l~~~l~~~~~vv~~~~g 99 (291)
T 1ks9_A 77 SDAVKSLASTLPVTTPILLIHNG 99 (291)
T ss_dssp HHHHHHHHTTSCTTSCEEEECSS
T ss_pred HHHHHHHHhhCCCCCEEEEecCC
Confidence 67788888889888876655443
No 413
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=63.45 E-value=20 Score=27.15 Aligned_cols=90 Identities=16% Similarity=0.108 Sum_probs=52.2
Q ss_pred CCCeEEEEcCCCChhHHHHH----hcCCceEEEecCCCC----CCcEEEcCCCCCC--------CCCCceeeEEcccch-
Q 028410 96 NHSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDS----LPLVSRADPHNLP--------FFDEAFDVAFTAHLA- 158 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la----~~~~~~v~~vD~s~~----~~~~~~~d~~~~~--------~~~~~fD~i~~~~~~- 158 (209)
.+.++|=.|++.| .+..++ +.+...|+.+|.++. .+.++..|+.+.. ...+..|+++.+.-.
T Consensus 3 ~~k~vlITGas~g-IG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~ 81 (244)
T 4e4y_A 3 AMANYLVTGGSKG-IGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGIL 81 (244)
T ss_dssp CCEEEEEETTTSH-HHHHHHHHHTTSTTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCC
T ss_pred CCCeEEEeCCCCh-HHHHHHHHHHhcCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCccC
Confidence 3557888886654 455544 323348888887765 3347788887632 224579999986211
Q ss_pred -----hhhCH--------------HHHHHHHHHhcccCcEEEEEEec
Q 028410 159 -----EALFP--------------SRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 159 -----~~~~~--------------~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
...++ ..+.+.+.+.++++|.++.+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~ 128 (244)
T 4e4y_A 82 IKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSD 128 (244)
T ss_dssp CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCG
T ss_pred CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCH
Confidence 11111 23445556667778887666443
No 414
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=62.31 E-value=16 Score=28.77 Aligned_cols=88 Identities=13% Similarity=0.050 Sum_probs=52.7
Q ss_pred CCCeEEEEcCCCChhHHHH----HhcCCceEEEecCCCC---------------CCcEEEcCCCCCC-----C-----CC
Q 028410 96 NHSKVLCVSAGAGHEVMAF----NSIGVADVTGVELMDS---------------LPLVSRADPHNLP-----F-----FD 146 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~l----a~~~~~~v~~vD~s~~---------------~~~~~~~d~~~~~-----~-----~~ 146 (209)
.+.++|=.|++.| .+..+ ++.|. +|+.+|.++. .+.++.+|+.+.. + .-
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4678888886654 44444 44576 8888887754 2336778887642 0 01
Q ss_pred CceeeEEccc-ch------hhhC--------------HHHHHHHHHHhcccCcEEEEEEe
Q 028410 147 EAFDVAFTAH-LA------EALF--------------PSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 147 ~~fD~i~~~~-~~------~~~~--------------~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
+..|+++.+. .. ...+ +..+.+.+.+.++++|.++.+..
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 4689988751 11 0011 13355666777788898766544
No 415
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=62.16 E-value=16 Score=28.94 Aligned_cols=101 Identities=12% Similarity=0.078 Sum_probs=56.1
Q ss_pred CCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEEc-CC---CCCCCCCCceeeEEcccchhhhCHHHHHH
Q 028410 97 HSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSRA-DP---HNLPFFDEAFDVAFTAHLAEALFPSRFVG 168 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~~-d~---~~~~~~~~~fD~i~~~~~~~~~~~~~~l~ 168 (209)
..+|.=||+| ..+..++. .|+ +|+++|.+++..+-... .+ .++.---. .|+|+..-- .......++.
T Consensus 15 ~~~I~vIG~G--~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp-~~~~~~~v~~ 89 (296)
T 3qha_A 15 QLKLGYIGLG--NMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVL-DDAQVREVVG 89 (296)
T ss_dssp CCCEEEECCS--TTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCS-SHHHHHHHHH
T ss_pred CCeEEEECcC--HHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECC-ChHHHHHHHH
Confidence 4678889877 45544443 466 89999999886652211 11 11110013 788877321 1112355668
Q ss_pred HHHHhcccCcEEEEEEecCCcccHHHHHHHhcccc
Q 028410 169 EMERTVKIGGVCMVLMEECAGREIKQIVELFRTSS 203 (209)
Q Consensus 169 ~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~ 203 (209)
++...++||..+ +............+.+.+...+
T Consensus 90 ~l~~~l~~g~iv-v~~st~~~~~~~~~~~~~~~~g 123 (296)
T 3qha_A 90 ELAGHAKPGTVI-AIHSTISDTTAVELARDLKARD 123 (296)
T ss_dssp HHHTTCCTTCEE-EECSCCCHHHHHHHHHHHGGGT
T ss_pred HHHHhcCCCCEE-EEeCCCCHHHHHHHHHHHHHcC
Confidence 888888887754 3333333344455555555443
No 416
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=61.26 E-value=4.3 Score=32.07 Aligned_cols=98 Identities=12% Similarity=0.036 Sum_probs=53.7
Q ss_pred CeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCc--------EEE------cCCC--CC-CCCC--CceeeEEc
Q 028410 98 SKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPL--------VSR------ADPH--NL-PFFD--EAFDVAFT 154 (209)
Q Consensus 98 ~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~--------~~~------~d~~--~~-~~~~--~~fD~i~~ 154 (209)
++|.=+|+| ..+..++. .|+ +|+.+|.+++..+ ... ..+. +. .... ...|+|+.
T Consensus 4 m~i~iiG~G--~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 4 MKIAIAGAG--AMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred CeEEEECcC--HHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence 578889886 55555544 466 8999998865322 110 0010 10 1111 26898887
Q ss_pred ccchhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccc
Q 028410 155 AHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (209)
Q Consensus 155 ~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~ 202 (209)
.--.. ....++.++...++|+..++.+... -.....+.+.+...
T Consensus 81 ~v~~~--~~~~v~~~l~~~l~~~~~iv~~~~g--~~~~~~l~~~~~~~ 124 (316)
T 2ew2_A 81 LTKAQ--QLDAMFKAIQPMITEKTYVLCLLNG--LGHEDVLEKYVPKE 124 (316)
T ss_dssp CSCHH--HHHHHHHHHGGGCCTTCEEEECCSS--SCTHHHHTTTSCGG
T ss_pred Eeccc--cHHHHHHHHHHhcCCCCEEEEecCC--CCcHHHHHHHcCCc
Confidence 43221 2466777888888887765444332 22335555566544
No 417
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=60.83 E-value=19 Score=29.00 Aligned_cols=35 Identities=6% Similarity=0.095 Sum_probs=28.2
Q ss_pred CCCeEEEEcCCCChhHHHHHhc-C----CceEEEecCCCC
Q 028410 96 NHSKVLCVSAGAGHEVMAFNSI-G----VADVTGVELMDS 130 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~~-~----~~~v~~vD~s~~ 130 (209)
.+..|+-+|||.|.....+++. + .-+.+.+|+.+.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~ 99 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHH 99 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcc
Confidence 4679999999999999999883 2 248899998554
No 418
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=60.25 E-value=32 Score=25.54 Aligned_cols=79 Identities=10% Similarity=-0.031 Sum_probs=48.3
Q ss_pred eEEEEcCCCChhHHHHHh----cCCceEEEecCCCCC---------CcEEEcCCCCCC----CCCCceeeEEcccchhhh
Q 028410 99 KVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSL---------PLVSRADPHNLP----FFDEAFDVAFTAHLAEAL 161 (209)
Q Consensus 99 ~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~---------~~~~~~d~~~~~----~~~~~fD~i~~~~~~~~~ 161 (209)
+|+=+|+ |..+..+++ .|. +|+.+|.+++. ..++.+|..+.. ..-...|++++..-..
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d-- 76 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRD-- 76 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCH--
T ss_pred EEEEECC--CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCc--
Confidence 5666775 678877766 365 89999988752 347788887632 1235688887732111
Q ss_pred CHHHHHHHHHHhcccCcEEEE
Q 028410 162 FPSRFVGEMERTVKIGGVCMV 182 (209)
Q Consensus 162 ~~~~~l~~~~r~LkpgG~lil 182 (209)
.....+..+.+.+.|...++.
T Consensus 77 ~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 77 EVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp HHHHHHHHHHHHTSCCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCeEEE
Confidence 123344555666666666443
No 419
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=58.22 E-value=6.8 Score=31.06 Aligned_cols=90 Identities=17% Similarity=0.052 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCCC---hhHHHHHhcCCceEEEecCCCCCC-----------cEEEcCCCCCCC----------CCCceee
Q 028410 96 NHSKVLCVSAGAG---HEVMAFNSIGVADVTGVELMDSLP-----------LVSRADPHNLPF----------FDEAFDV 151 (209)
Q Consensus 96 ~~~~iLDiGcG~G---~~~~~la~~~~~~v~~vD~s~~~~-----------~~~~~d~~~~~~----------~~~~fD~ 151 (209)
++..+|=-|++.| ..+..|++.|. +|+.+|.+++.+ ..++.|+.+..- .-+..|+
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4678888897776 34444555676 999999887633 256788776420 1267898
Q ss_pred EEccc-c-----hhhhC--------------HHHHHHHHHHhcccCcEEEEEEec
Q 028410 152 AFTAH-L-----AEALF--------------PSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 152 i~~~~-~-----~~~~~--------------~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
++.+. . ....+ +-.+.+.+.+.++.+|.++.+...
T Consensus 107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~ 161 (273)
T 4fgs_A 107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGST 161 (273)
T ss_dssp EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeeh
Confidence 88751 0 00011 133446777888889987666443
No 420
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=58.20 E-value=32 Score=24.08 Aligned_cols=97 Identities=14% Similarity=0.024 Sum_probs=54.6
Q ss_pred CCCeEEEEcCCC--ChhHHHHHh----cCCceEEEecCCC--CCCc-E-EEcCCCCCCCCCCceeeEEcccchhhhCHHH
Q 028410 96 NHSKVLCVSAGA--GHEVMAFNS----IGVADVTGVELMD--SLPL-V-SRADPHNLPFFDEAFDVAFTAHLAEALFPSR 165 (209)
Q Consensus 96 ~~~~iLDiGcG~--G~~~~~la~----~~~~~v~~vD~s~--~~~~-~-~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~ 165 (209)
...+|.=||+|. |..+..+++ .|+ +|+.++++. ..+. . ...++.+++ ...|+++..--. -...+
T Consensus 12 ~p~~IavIGas~~~g~~G~~~~~~L~~~G~-~v~~vnp~~~g~~i~G~~~~~sl~el~---~~~Dlvii~vp~--~~v~~ 85 (145)
T 2duw_A 12 STRTIALVGASDKPDRPSYRVMKYLLDQGY-HVIPVSPKVAGKTLLGQQGYATLADVP---EKVDMVDVFRNS--EAAWG 85 (145)
T ss_dssp HCCCEEEESCCSCTTSHHHHHHHHHHHHTC-CEEEECSSSTTSEETTEECCSSTTTCS---SCCSEEECCSCS--THHHH
T ss_pred CCCEEEEECcCCCCCChHHHHHHHHHHCCC-EEEEeCCcccccccCCeeccCCHHHcC---CCCCEEEEEeCH--HHHHH
Confidence 356799999976 666665554 477 688888876 3321 1 112344444 367988774211 12355
Q ss_pred HHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 166 FVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 166 ~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
++.++.+ ..+++. ++ ... ...+++.+..+..++
T Consensus 86 v~~~~~~-~g~~~i-~i-~~~---~~~~~l~~~a~~~Gi 118 (145)
T 2duw_A 86 VAQEAIA-IGAKTL-WL-QLG---VINEQAAVLAREAGL 118 (145)
T ss_dssp HHHHHHH-HTCCEE-EC-CTT---CCCHHHHHHHHTTTC
T ss_pred HHHHHHH-cCCCEE-EE-cCC---hHHHHHHHHHHHcCC
Confidence 5566555 445553 22 221 225667777776664
No 421
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=58.01 E-value=88 Score=26.65 Aligned_cols=57 Identities=19% Similarity=0.064 Sum_probs=42.0
Q ss_pred CCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEEcCCCCCC-CCCCceeeEEcc
Q 028410 97 HSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSRADPHNLP-FFDEAFDVAFTA 155 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~~d~~~~~-~~~~~fD~i~~~ 155 (209)
+++||=.| |+|..+..+++ .|+ +|++++.++...+.+..|..+.- -.-..+|+|+..
T Consensus 147 ~m~VLVTG-atG~IG~~l~~~L~~~G~-~V~~l~R~~~~~~~v~~d~~~~~~~~l~~~D~Vih~ 208 (516)
T 3oh8_A 147 PLTVAITG-SRGLVGRALTAQLQTGGH-EVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHL 208 (516)
T ss_dssp CCEEEEES-TTSHHHHHHHHHHHHTTC-EEEEEESSSCCTTCEECCTTSCCTTTTTTCSEEEEC
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCC-EEEEEECCCCCccceeecccchhHHhcCCCCEEEEC
Confidence 68999888 66888888766 376 99999998877777777776421 112468999874
No 422
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=57.80 E-value=36 Score=24.89 Aligned_cols=85 Identities=13% Similarity=0.087 Sum_probs=51.9
Q ss_pred CeEEEEcCCCChhHHHHHh----cCCceEEEecCCC--------CCCcEEEcCCCCCCC-CCCceeeEEcccchh----h
Q 028410 98 SKVLCVSAGAGHEVMAFNS----IGVADVTGVELMD--------SLPLVSRADPHNLPF-FDEAFDVAFTAHLAE----A 160 (209)
Q Consensus 98 ~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~--------~~~~~~~~d~~~~~~-~~~~fD~i~~~~~~~----~ 160 (209)
++||=.| |+|..+..+++ .|+ +|++++.++ ..+.++.+|+.+... .-+.+|+|+++.-.. .
T Consensus 1 MkilVtG-atG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 1 MKIAVLG-ATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSC
T ss_pred CEEEEEc-CCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcch
Confidence 3677778 56777777765 365 999998775 356688888876532 114579988753111 0
Q ss_pred h-CHHHHHHHHHHhccc-CcEEEEEE
Q 028410 161 L-FPSRFVGEMERTVKI-GGVCMVLM 184 (209)
Q Consensus 161 ~-~~~~~l~~~~r~Lkp-gG~lil~~ 184 (209)
. ........+.+.++. |++++++.
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp THHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred hhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 1 124445666666654 45655553
No 423
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=57.42 E-value=27 Score=27.81 Aligned_cols=102 Identities=13% Similarity=0.044 Sum_probs=55.5
Q ss_pred CeEEEEcCCC--ChhHHHHHhcCCceEEEecCCCC-CCc----EEEc-CCC-----------CCCCCCCceeeEEcccch
Q 028410 98 SKVLCVSAGA--GHEVMAFNSIGVADVTGVELMDS-LPL----VSRA-DPH-----------NLPFFDEAFDVAFTAHLA 158 (209)
Q Consensus 98 ~~iLDiGcG~--G~~~~~la~~~~~~v~~vD~s~~-~~~----~~~~-d~~-----------~~~~~~~~fD~i~~~~~~ 158 (209)
++|+=+|+|. +.++..|++.|. +|+.++.++. .+. .+.. ... +..-....+|+|+..-=.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~ 81 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKV 81 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCC
Confidence 5788888772 233333444565 8999988752 000 0111 000 111111368999874212
Q ss_pred hhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 159 EALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 159 ~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
. +...+++++...++++..++.+....+. ...+.+.|....+
T Consensus 82 ~--~~~~~l~~l~~~l~~~t~Iv~~~nGi~~--~~~l~~~~~~~~v 123 (320)
T 3i83_A 82 V--EGADRVGLLRDAVAPDTGIVLISNGIDI--EPEVAAAFPDNEV 123 (320)
T ss_dssp C--TTCCHHHHHTTSCCTTCEEEEECSSSSC--SHHHHHHSTTSCE
T ss_pred C--ChHHHHHHHHhhcCCCCEEEEeCCCCCh--HHHHHHHCCCCcE
Confidence 1 2335678888889998876655554432 3566677765443
No 424
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=57.30 E-value=8.7 Score=33.04 Aligned_cols=102 Identities=14% Similarity=0.066 Sum_probs=54.5
Q ss_pred CCCCeEEEEcCCCChhHHH----HHhcCCceEEEecCCCCCCcEEEcCC------------------CCCCCCC------
Q 028410 95 FNHSKVLCVSAGAGHEVMA----FNSIGVADVTGVELMDSLPLVSRADP------------------HNLPFFD------ 146 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~----la~~~~~~v~~vD~s~~~~~~~~~d~------------------~~~~~~~------ 146 (209)
...++|.=||+| +.+.. +++.|+ +|+++|.+++.++-+.... .++.+..
T Consensus 6 ~~~~~I~VIG~G--~vG~~lA~~la~~G~-~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~ 82 (478)
T 2y0c_A 6 HGSMNLTIIGSG--SVGLVTGACLADIGH-DVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAV 82 (478)
T ss_dssp -CCCEEEEECCS--HHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHH
T ss_pred CCCceEEEECcC--HHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHh
Confidence 567899999887 44444 445677 8999999877443222111 0111111
Q ss_pred CceeeEEcccch-----hh---hCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhc
Q 028410 147 EAFDVAFTAHLA-----EA---LFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (209)
Q Consensus 147 ~~fD~i~~~~~~-----~~---~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~ 200 (209)
...|+|+..--. .. .....+++++.+.++||..+ +............+.+.+.
T Consensus 83 ~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iV-V~~STv~~gt~~~l~~~l~ 143 (478)
T 2y0c_A 83 AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVI-VDKSTVPVGTAERVRAAVA 143 (478)
T ss_dssp HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEE-EECSCCCTTHHHHHHHHHH
T ss_pred hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEE-EEeCCcCCCchHHHHHHHH
Confidence 246777664111 00 12467778888999987654 3333322233334444443
No 425
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=57.25 E-value=46 Score=25.32 Aligned_cols=90 Identities=9% Similarity=-0.007 Sum_probs=54.2
Q ss_pred CCCeEEEEcCC--CC---hhHHHHHhcCCceEEEecCCCC---------------CCcEEEcCCCCCCC----------C
Q 028410 96 NHSKVLCVSAG--AG---HEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPF----------F 145 (209)
Q Consensus 96 ~~~~iLDiGcG--~G---~~~~~la~~~~~~v~~vD~s~~---------------~~~~~~~d~~~~~~----------~ 145 (209)
.+.++|=.|++ +| ..+..+++.|. +|+.++.++. .+.++..|+.+..- .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 46688888876 33 24444555676 8888887653 34577888877531 0
Q ss_pred CCceeeEEccc-ch------h---hhCH--------------HHHHHHHHHhcccCcEEEEEEec
Q 028410 146 DEAFDVAFTAH-LA------E---ALFP--------------SRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 146 ~~~fD~i~~~~-~~------~---~~~~--------------~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
-+.+|+++.+. +. . ..+. ..+.+.+.+.++++|.++.+...
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 149 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL 149 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence 14688888752 11 0 1122 22445666777788988777654
No 426
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=57.21 E-value=63 Score=27.90 Aligned_cols=85 Identities=9% Similarity=-0.093 Sum_probs=55.7
Q ss_pred CeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCc----EEEcCCCCCC----CCCCceeeEEcccchhhhCHHH
Q 028410 98 SKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPL----VSRADPHNLP----FFDEAFDVAFTAHLAEALFPSR 165 (209)
Q Consensus 98 ~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~----~~~~d~~~~~----~~~~~fD~i~~~~~~~~~~~~~ 165 (209)
.+++=+|+ |..+..+++ .+. +|+.+|.+++.++ ++.+|..+.. ..-+.+|.+++..-.. ...-
T Consensus 349 ~~viIiG~--G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d--~~ni 423 (565)
T 4gx0_A 349 ELIFIIGH--GRIGCAAAAFLDRKPV-PFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIVTTNDD--STNI 423 (565)
T ss_dssp CCEEEECC--SHHHHHHHHHHHHTTC-CEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTTTSCSEEEECCSCH--HHHH
T ss_pred CCEEEECC--CHHHHHHHHHHHHCCC-CEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCccccCEEEEECCCc--hHHH
Confidence 77888777 588877776 365 9999999988654 7889987754 2346788888742211 1223
Q ss_pred HHHHHHHhcccCcEEEEEEecC
Q 028410 166 FVGEMERTVKIGGVCMVLMEEC 187 (209)
Q Consensus 166 ~l~~~~r~LkpgG~lil~~~~~ 187 (209)
+.....+.+.|.-.++.-....
T Consensus 424 ~~~~~ak~l~~~~~iiar~~~~ 445 (565)
T 4gx0_A 424 FLTLACRHLHSHIRIVARANGE 445 (565)
T ss_dssp HHHHHHHHHCSSSEEEEEESST
T ss_pred HHHHHHHHHCCCCEEEEEECCH
Confidence 3455667777776755555443
No 427
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=57.17 E-value=8.7 Score=31.12 Aligned_cols=82 Identities=10% Similarity=0.043 Sum_probs=46.3
Q ss_pred CCC-CeEEEEcCCCChh---HHHHHh-cCCceEEEecCCCCCCcEE-------EcCCCCCCCC--------CCceeeEEc
Q 028410 95 FNH-SKVLCVSAGAGHE---VMAFNS-IGVADVTGVELMDSLPLVS-------RADPHNLPFF--------DEAFDVAFT 154 (209)
Q Consensus 95 ~~~-~~iLDiGcG~G~~---~~~la~-~~~~~v~~vD~s~~~~~~~-------~~d~~~~~~~--------~~~fD~i~~ 154 (209)
.++ .+|| |-.|+|.. +..+++ .|. +|+++|.+++..+.. ..|..+..+. ...+|+++.
T Consensus 162 ~~g~~~vl-i~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid 239 (349)
T 3pi7_A 162 QEGEKAFV-MTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLD 239 (349)
T ss_dssp HHCCSEEE-ESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEE
T ss_pred hCCCCEEE-EeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEE
Confidence 344 4555 43344444 444555 476 999999887744311 1122221111 135888876
Q ss_pred ccchhhhCHHHHHHHHHHhcccCcEEEEEE
Q 028410 155 AHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (209)
Q Consensus 155 ~~~~~~~~~~~~l~~~~r~LkpgG~lil~~ 184 (209)
+.-. ..+....+.|++||+++.+-
T Consensus 240 ~~g~------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 240 AVTG------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp SSCH------HHHHHHHHHSCTTCEEEECC
T ss_pred CCCC------hhHHHHHhhhcCCCEEEEEe
Confidence 3211 22467889999999987764
No 428
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=56.90 E-value=7.7 Score=33.52 Aligned_cols=36 Identities=25% Similarity=0.158 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCC
Q 028410 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL 131 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~ 131 (209)
...+++|+-||.|.....+.+.|+..|.++|+++.+
T Consensus 87 ~~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A 122 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHA 122 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHH
T ss_pred ccceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHH
Confidence 357999999999999999988887678999998863
No 429
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=56.60 E-value=22 Score=27.48 Aligned_cols=88 Identities=13% Similarity=0.058 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCCChhHHH----HHhcCCceEEEecCCCC--------------------------CCcEEEcCCCCCCC-
Q 028410 96 NHSKVLCVSAGAGHEVMA----FNSIGVADVTGVELMDS--------------------------LPLVSRADPHNLPF- 144 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~----la~~~~~~v~~vD~s~~--------------------------~~~~~~~d~~~~~~- 144 (209)
.+.++|=.|++.| .+.. |++.|. +|+.+|.+.. .+.++..|+.+..-
T Consensus 9 ~gk~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGARG-QGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 4678888887654 4444 444576 8999887621 22366778776420
Q ss_pred ---------CCCceeeEEcccch-h---hhC--------------HHHHHHHHHHhcccCcEEEEEEe
Q 028410 145 ---------FDEAFDVAFTAHLA-E---ALF--------------PSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 145 ---------~~~~fD~i~~~~~~-~---~~~--------------~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
.-+..|+++++.-. . ..+ +..+.+.+.+.++++|.++.+..
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 01478998875210 0 011 13344666677778888766544
No 430
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=56.57 E-value=42 Score=26.01 Aligned_cols=58 Identities=10% Similarity=-0.043 Sum_probs=38.2
Q ss_pred CCCeEEEEcCCCChhHHHH----HhcCCceEEEecCCCCCC--------------cEEEcCCCCCCC---------CCCc
Q 028410 96 NHSKVLCVSAGAGHEVMAF----NSIGVADVTGVELMDSLP--------------LVSRADPHNLPF---------FDEA 148 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~l----a~~~~~~v~~vD~s~~~~--------------~~~~~d~~~~~~---------~~~~ 148 (209)
.+.++|=.|++. ..+..+ ++.|. +|+.+|.++... .++..|+.+..- ..+.
T Consensus 32 ~gk~~lVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 32 RGRTALVTGSSR-GIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 467788888664 444444 44576 899999887643 366788876531 0147
Q ss_pred eeeEEcc
Q 028410 149 FDVAFTA 155 (209)
Q Consensus 149 fD~i~~~ 155 (209)
.|+++.+
T Consensus 110 iD~lvnn 116 (275)
T 4imr_A 110 VDILVIN 116 (275)
T ss_dssp CCEEEEC
T ss_pred CCEEEEC
Confidence 8999885
No 431
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=56.31 E-value=5.4 Score=32.97 Aligned_cols=102 Identities=7% Similarity=-0.039 Sum_probs=56.1
Q ss_pred CCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEE-cCCC---CCC---CCCCceeeEEcccchhhhCHH
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSR-ADPH---NLP---FFDEAFDVAFTAHLAEALFPS 164 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~-~d~~---~~~---~~~~~fD~i~~~~~~~~~~~~ 164 (209)
..++|.=||+| ..+..++. .|+ +|+++|.+++..+-.. ..+. ++. -.....|+|+..--.. ...
T Consensus 21 ~~mkIgiIGlG--~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~--~v~ 95 (358)
T 4e21_A 21 QSMQIGMIGLG--RMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA--VVD 95 (358)
T ss_dssp -CCEEEEECCS--HHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG--GHH
T ss_pred cCCEEEEECch--HHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH--HHH
Confidence 45789999876 66666554 476 8999999876433111 1111 100 0012348888742222 356
Q ss_pred HHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccc
Q 028410 165 RFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSS 203 (209)
Q Consensus 165 ~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~ 203 (209)
.++.++...+++|..+ +............+.+.+...+
T Consensus 96 ~vl~~l~~~l~~g~ii-Id~st~~~~~~~~~~~~l~~~g 133 (358)
T 4e21_A 96 SMLQRMTPLLAANDIV-IDGGNSHYQDDIRRADQMRAQG 133 (358)
T ss_dssp HHHHHHGGGCCTTCEE-EECSSCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHhhCCCCCEE-EeCCCCChHHHHHHHHHHHHCC
Confidence 6778888888887654 3333333334444555554443
No 432
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=55.10 E-value=24 Score=25.98 Aligned_cols=56 Identities=9% Similarity=-0.066 Sum_probs=39.4
Q ss_pred CeEEEEcCCCChhHHHHHh----cCCceEEEecCCCC------CCcEEEcCCCC-CC---CCCCceeeEEcc
Q 028410 98 SKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDS------LPLVSRADPHN-LP---FFDEAFDVAFTA 155 (209)
Q Consensus 98 ~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~------~~~~~~~d~~~-~~---~~~~~fD~i~~~ 155 (209)
++||=.| |+|..+..+++ .|+ +|++++.++. .+.++.+|+.+ .. -.-..+|+|+..
T Consensus 1 M~ilItG-atG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ 70 (219)
T 3dqp_A 1 MKIFIVG-STGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINV 70 (219)
T ss_dssp CEEEEES-TTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred CeEEEEC-CCCHHHHHHHHHHHHCCC-EEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence 3677777 56888888876 365 9999998864 34578899888 21 112358999875
No 433
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=54.12 E-value=7.2 Score=31.25 Aligned_cols=101 Identities=8% Similarity=-0.018 Sum_probs=56.1
Q ss_pred CCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEEcCCCCCCCCCCceeeEEccc-chhhhCHHHH-HHH
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAH-LAEALFPSRF-VGE 169 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~~d~~~~~~~~~~fD~i~~~~-~~~~~~~~~~-l~~ 169 (209)
.+.+|.=+|.| ..+..+++ .|. +|+++|.++...+... ...++.---...|+|+.+- .... ...+ -.+
T Consensus 121 ~g~tvGIIGlG--~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~-~~~~l~ell~~aDiV~l~~P~t~~--t~~li~~~ 194 (290)
T 3gvx_A 121 YGKALGILGYG--GIGRRVAHLAKAFGM-RVIAYTRSSVDQNVDV-ISESPADLFRQSDFVLIAIPLTDK--TRGMVNSR 194 (290)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHHTC-EEEEECSSCCCTTCSE-ECSSHHHHHHHCSEEEECCCCCTT--TTTCBSHH
T ss_pred ecchheeeccC--chhHHHHHHHHhhCc-EEEEEecccccccccc-ccCChHHHhhccCeEEEEeecccc--chhhhhHH
Confidence 35788888876 67766665 476 9999999876544311 0111110013578887741 1110 0111 145
Q ss_pred HHHhcccCcEEEEEEecCCcccHHHHHHHhcccc
Q 028410 170 MERTVKIGGVCMVLMEECAGREIKQIVELFRTSS 203 (209)
Q Consensus 170 ~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~ 203 (209)
....+|||..++= +....-.....+.+.++..+
T Consensus 195 ~l~~mk~gailIN-~aRG~~vd~~aL~~aL~~g~ 227 (290)
T 3gvx_A 195 LLANARKNLTIVN-VARADVVSKPDMIGFLKERS 227 (290)
T ss_dssp HHTTCCTTCEEEE-CSCGGGBCHHHHHHHHHHCT
T ss_pred HHhhhhcCceEEE-eehhcccCCcchhhhhhhcc
Confidence 6788999987533 33333445666666666544
No 434
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=53.83 E-value=7.3 Score=35.79 Aligned_cols=86 Identities=21% Similarity=0.230 Sum_probs=54.9
Q ss_pred hcccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcEE------EcCCCCCCC--------CCCceeeE
Q 028410 90 GKSLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLVS------RADPHNLPF--------FDEAFDVA 152 (209)
Q Consensus 90 ~~~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~~------~~d~~~~~~--------~~~~fD~i 152 (209)
....++++.+||=.|+ |.|..+..+++ .|. +|++++.+++ .+.. ..|..+..+ ....+|+|
T Consensus 339 ~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~k-~~~l~lga~~v~~~~~~~~~~~i~~~t~g~GvDvV 416 (795)
T 3slk_A 339 DLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASEDK-WQAVELSREHLASSRTCDFEQQFLGATGGRGVDVV 416 (795)
T ss_dssp CCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGGG-GGGSCSCGGGEECSSSSTHHHHHHHHSCSSCCSEE
T ss_pred HHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChHH-hhhhhcChhheeecCChhHHHHHHHHcCCCCeEEE
Confidence 3456789999999984 46778888888 576 8999885552 1111 111112111 12468998
Q ss_pred EcccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 153 FTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
+.+--. +.+.+..+.|+|||+++.+
T Consensus 417 ld~~gg------~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 417 LNSLAG------EFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp EECCCT------TTTHHHHTSCTTCEEEEEC
T ss_pred EECCCc------HHHHHHHHHhcCCCEEEEe
Confidence 873211 2457788999999997765
No 435
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=53.78 E-value=36 Score=26.16 Aligned_cols=89 Identities=17% Similarity=0.184 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCCChhHHH----HHhcCCceEEEecCCCC---------------CCcEEEcCCCCCCC----------CC
Q 028410 96 NHSKVLCVSAGAGHEVMA----FNSIGVADVTGVELMDS---------------LPLVSRADPHNLPF----------FD 146 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~----la~~~~~~v~~vD~s~~---------------~~~~~~~d~~~~~~----------~~ 146 (209)
.+.++|=.|++.| .+.. +++.|. +|+.++.... .+.++..|+.+..- .-
T Consensus 17 ~~k~~lVTGas~g-IG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 17 DGKVALVTGSGRG-IGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TTCEEEESCTTSH-HHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4567888886654 4444 444576 7877765432 23467788876420 01
Q ss_pred CceeeEEccc-ch-----hhhC--------------HHHHHHHHHHhcccCcEEEEEEec
Q 028410 147 EAFDVAFTAH-LA-----EALF--------------PSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 147 ~~fD~i~~~~-~~-----~~~~--------------~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
+..|+++.+. +. ...+ +..+.+.+.+.++++|.++.+...
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 154 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN 154 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence 4689988751 10 0011 133556777888889998776554
No 436
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=53.70 E-value=67 Score=23.96 Aligned_cols=88 Identities=8% Similarity=-0.057 Sum_probs=52.4
Q ss_pred CCCCeEEEEcCCCChhHHHHHh-c-CCceEEEecCCCCC-------CcEEEcCCCCCC----CCCCceeeEEcccchhhh
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS-I-GVADVTGVELMDSL-------PLVSRADPHNLP----FFDEAFDVAFTAHLAEAL 161 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~-~-~~~~v~~vD~s~~~-------~~~~~~d~~~~~----~~~~~fD~i~~~~~~~~~ 161 (209)
....+|+=+|+ |..+..+++ . ..+.|+.+|.+++. ..++.+|..+.. ..-...|.+++..-..
T Consensus 7 ~~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d-- 82 (234)
T 2aef_A 7 AKSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESD-- 82 (234)
T ss_dssp ---CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCH--
T ss_pred CCCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCc--
Confidence 45668888887 588888876 2 11129999988753 457888887632 1235678887732111
Q ss_pred CHHHHHHHHHHhcccCcEEEEEEec
Q 028410 162 FPSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 162 ~~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
..........+.+.|+..++.-+..
T Consensus 83 ~~n~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 83 SETIHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred HHHHHHHHHHHHHCCCCeEEEEECC
Confidence 1223345566777887775554443
No 437
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=53.15 E-value=45 Score=25.73 Aligned_cols=89 Identities=13% Similarity=0.105 Sum_probs=52.8
Q ss_pred CCCeEEEEcCCCC---hhHHHHHhcCCceEEEecCCCC---------------CCcEEEcCCCCCC-----C-----CCC
Q 028410 96 NHSKVLCVSAGAG---HEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLP-----F-----FDE 147 (209)
Q Consensus 96 ~~~~iLDiGcG~G---~~~~~la~~~~~~v~~vD~s~~---------------~~~~~~~d~~~~~-----~-----~~~ 147 (209)
.+.++|=.|++.| ..+..+++.|. +|+.++.... .+.++.+|+.+.. + .-+
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678888897654 23334444576 7888765432 2336778887642 0 014
Q ss_pred ceeeEEcccc------hhhhC--------------HHHHHHHHHHhcccCcEEEEEEe
Q 028410 148 AFDVAFTAHL------AEALF--------------PSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 148 ~fD~i~~~~~------~~~~~--------------~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
..|+++.+.- ....+ +..+.+.+.+.++++|.++.+..
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 6899988521 00011 13355677788888999777754
No 438
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=52.82 E-value=19 Score=30.71 Aligned_cols=103 Identities=11% Similarity=0.051 Sum_probs=57.2
Q ss_pred CCCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEEcCC------------------CCCCCC------C
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSRADP------------------HNLPFF------D 146 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~~d~------------------~~~~~~------~ 146 (209)
....+|-=||.| +.+..++. .|+ +|+++|++++.++-+.... .++.+. -
T Consensus 6 ~~~~~~~vIGlG--~vG~~~A~~La~~G~-~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~ 82 (446)
T 4a7p_A 6 HGSVRIAMIGTG--YVGLVSGACFSDFGH-EVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGV 82 (446)
T ss_dssp -CCCEEEEECCS--HHHHHHHHHHHHTTC-EEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHH
T ss_pred CCceEEEEEcCC--HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHH
Confidence 445677777766 66665554 577 9999999998665322211 011110 1
Q ss_pred CceeeEEcc---cc---hhhhC---HHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhcc
Q 028410 147 EAFDVAFTA---HL---AEALF---PSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRT 201 (209)
Q Consensus 147 ~~fD~i~~~---~~---~~~~~---~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~ 201 (209)
...|+|+.. .. ....| ...+++.+.+.+++|..++.. ........+.+.+.+..
T Consensus 83 ~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~-STv~pgtt~~l~~~l~e 145 (446)
T 4a7p_A 83 KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTK-STVPVGTGDEVERIIAE 145 (446)
T ss_dssp TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEEC-SCCCTTHHHHHHHHHHH
T ss_pred hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEe-CCCCchHHHHHHHHHHH
Confidence 246777664 11 11111 466778888999988765443 33333445555555443
No 439
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=52.76 E-value=5.1 Score=32.26 Aligned_cols=42 Identities=24% Similarity=0.304 Sum_probs=28.7
Q ss_pred chhhh-CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhc
Q 028410 157 LAEAL-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (209)
Q Consensus 157 ~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~ 200 (209)
+...+ .....|....+.|+|||+++++...+ -+-+.++..|+
T Consensus 217 vn~el~~l~~~l~~~~~~l~~ggr~~visfhs--ledr~vk~~~~ 259 (301)
T 1m6y_A 217 VNRELENLKEFLKKAEDLLNPGGRIVVISFHS--LEDRIVKETFR 259 (301)
T ss_dssp HHTHHHHHHHHHHHGGGGEEEEEEEEEEESSH--HHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhhCCCCEEEEEecCc--HHHHHHHHHhh
Confidence 33444 45788899999999999998887663 23344444554
No 440
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=52.65 E-value=32 Score=29.20 Aligned_cols=35 Identities=23% Similarity=0.400 Sum_probs=27.6
Q ss_pred CCeEEEEcCCCChhHHHHHh----cC--CceEEEecCCCCC
Q 028410 97 HSKVLCVSAGAGHEVMAFNS----IG--VADVTGVELMDSL 131 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~----~~--~~~v~~vD~s~~~ 131 (209)
...|+|+|+|+|.++..+.+ .+ ..+++.||+|+..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~L 178 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGEL 178 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSS
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHH
Confidence 57999999999998877754 22 2379999999873
No 441
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=52.64 E-value=31 Score=27.46 Aligned_cols=58 Identities=7% Similarity=0.003 Sum_probs=40.8
Q ss_pred CCeEEEEcCCCChhHHHHHh----cCCceEEEecCCC---------------CCCcEEEcCCCCCC-----CCCCceeeE
Q 028410 97 HSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMD---------------SLPLVSRADPHNLP-----FFDEAFDVA 152 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~---------------~~~~~~~~d~~~~~-----~~~~~fD~i 152 (209)
.++||=.| |+|..+..+++ .|+ +|++++.++ ..+.++.+|+.+.. +....+|+|
T Consensus 10 ~~~IlVtG-atG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V 87 (346)
T 3i6i_A 10 KGRVLIAG-ATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV 87 (346)
T ss_dssp -CCEEEEC-TTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence 35799888 56888888766 365 899998876 24568889987732 222368999
Q ss_pred Eccc
Q 028410 153 FTAH 156 (209)
Q Consensus 153 ~~~~ 156 (209)
++..
T Consensus 88 i~~a 91 (346)
T 3i6i_A 88 VSTV 91 (346)
T ss_dssp EECC
T ss_pred EECC
Confidence 8853
No 442
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=51.54 E-value=12 Score=30.47 Aligned_cols=87 Identities=15% Similarity=0.138 Sum_probs=54.4
Q ss_pred ccCCCCCeEEEEcCCC-ChhHHHHHh-cCCceEEEecCCCCCCcEE-------EcCCCCC-C----CCCCceeeEEcccc
Q 028410 92 SLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPLVS-------RADPHNL-P----FFDEAFDVAFTAHL 157 (209)
Q Consensus 92 ~~~~~~~~iLDiGcG~-G~~~~~la~-~~~~~v~~vD~s~~~~~~~-------~~d~~~~-~----~~~~~fD~i~~~~~ 157 (209)
..++++.+||-+|+|. |..+..+++ .|. +|+++|.+++..++. ..|..+. . .. +.+|+|+...-
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~-~~~D~vid~~g 252 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYF-DTFDLIVVCAS 252 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSC-SCEEEEEECCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhh-cCCCEEEECCC
Confidence 4568899999999853 566666666 576 799999988754321 1111111 1 11 46999987421
Q ss_pred hhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 158 AEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 158 ~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
.. ....+.+..+.|+|||+++.+
T Consensus 253 ~~---~~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 253 SL---TDIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp CS---TTCCTTTGGGGEEEEEEEEEC
T ss_pred CC---cHHHHHHHHHHhcCCCEEEEe
Confidence 10 012345677899999997654
No 443
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=50.28 E-value=68 Score=24.72 Aligned_cols=92 Identities=14% Similarity=0.125 Sum_probs=46.8
Q ss_pred CeEEEEcCCCChhHHHHHh----cCCceEEE-ecCCCCCC-cE-EEcCCCCCCCCCCceeeEEcccchhhhCHHHHHHHH
Q 028410 98 SKVLCVSAGAGHEVMAFNS----IGVADVTG-VELMDSLP-LV-SRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEM 170 (209)
Q Consensus 98 ~~iLDiGcG~G~~~~~la~----~~~~~v~~-vD~s~~~~-~~-~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~~l~~~ 170 (209)
.+|.=+|| |..+..+.+ .+. ++++ +|.++... .+ +..|+.++ . ..|+++-.. .|......+
T Consensus 4 mkI~ViGa--GrMG~~i~~~l~~~~~-eLva~~d~~~~~~~gv~v~~dl~~l---~-~~DVvIDft-----~p~a~~~~~ 71 (243)
T 3qy9_A 4 MKILLIGY--GAMNQRVARLAEEKGH-EIVGVIENTPKATTPYQQYQHIADV---K-GADVAIDFS-----NPNLLFPLL 71 (243)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTC-EEEEEECSSCC--CCSCBCSCTTTC---T-TCSEEEECS-----CHHHHHHHH
T ss_pred eEEEEECc--CHHHHHHHHHHHhCCC-EEEEEEecCccccCCCceeCCHHHH---h-CCCEEEEeC-----ChHHHHHHH
Confidence 57889999 677777665 356 7776 68765421 10 11222222 2 678876321 244444444
Q ss_pred HHhcccCcEEEEEEecCCcccHHHHHHHhcccc
Q 028410 171 ERTVKIGGVCMVLMEECAGREIKQIVELFRTSS 203 (209)
Q Consensus 171 ~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~ 203 (209)
. ++.|-.+++.+......+...+.++-++..
T Consensus 72 ~--l~~g~~vVigTTG~s~e~~~~l~~aa~~~~ 102 (243)
T 3qy9_A 72 D--EDFHLPLVVATTGEKEKLLNKLDELSQNMP 102 (243)
T ss_dssp T--SCCCCCEEECCCSSHHHHHHHHHHHTTTSE
T ss_pred H--HhcCCceEeCCCCCCHHHHHHHHHHHhcCC
Confidence 3 665555444333322334445555544433
No 444
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=50.26 E-value=46 Score=27.43 Aligned_cols=59 Identities=14% Similarity=-0.001 Sum_probs=39.7
Q ss_pred CCCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCC--------------------------CCcEEEcCCCCCC-
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDS--------------------------LPLVSRADPHNLP- 143 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~--------------------------~~~~~~~d~~~~~- 143 (209)
.+..+||=.| |+|..+.++++ .|. +|++++.++. .+.++.+|+.+.+
T Consensus 67 ~~~~~vlVTG-atG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 144 (427)
T 4f6c_A 67 RPLGNTLLTG-ATGFLGAYLIEALQGYSH-RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD 144 (427)
T ss_dssp CCCEEEEEEC-TTSHHHHHHHHHHTTTEE-EEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred CCCCEEEEec-CCcHHHHHHHHHHHcCCC-EEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence 3456888888 56888888776 244 8999987765 4568888987732
Q ss_pred C-CCCceeeEEcc
Q 028410 144 F-FDEAFDVAFTA 155 (209)
Q Consensus 144 ~-~~~~fD~i~~~ 155 (209)
+ ....+|+|+.+
T Consensus 145 l~~~~~~d~Vih~ 157 (427)
T 4f6c_A 145 VVLPENMDTIIHA 157 (427)
T ss_dssp CCCSSCCSEEEEC
T ss_pred CCCcCCCCEEEEC
Confidence 1 34678999875
No 445
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=49.37 E-value=26 Score=27.04 Aligned_cols=76 Identities=12% Similarity=0.096 Sum_probs=42.9
Q ss_pred eEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEE-cC-----CCCCCCCCCceeeEEcccchhhhCHHHHHH
Q 028410 99 KVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSR-AD-----PHNLPFFDEAFDVAFTAHLAEALFPSRFVG 168 (209)
Q Consensus 99 ~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~-~d-----~~~~~~~~~~fD~i~~~~~~~~~~~~~~l~ 168 (209)
+|.=||+| ..+..++. .|+ +|+++|.+++..+... .. ..++.-. ...|+|+..--.. ....++.
T Consensus 2 ~i~iiG~G--~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~--~~~~~~~ 75 (279)
T 2f1k_A 2 KIGVVGLG--LIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQ--LILPTLE 75 (279)
T ss_dssp EEEEECCS--HHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHH--HHHHHHH
T ss_pred EEEEEcCc--HHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHH--HHHHHHH
Confidence 57778875 55555544 466 8999998865332100 00 1111111 4689888742221 2355667
Q ss_pred HHHHhcccCcEE
Q 028410 169 EMERTVKIGGVC 180 (209)
Q Consensus 169 ~~~r~LkpgG~l 180 (209)
++...++||..+
T Consensus 76 ~l~~~~~~~~~v 87 (279)
T 2f1k_A 76 KLIPHLSPTAIV 87 (279)
T ss_dssp HHGGGSCTTCEE
T ss_pred HHHhhCCCCCEE
Confidence 777778887754
No 446
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=48.64 E-value=56 Score=27.71 Aligned_cols=59 Identities=14% Similarity=-0.001 Sum_probs=42.4
Q ss_pred CCCCeEEEEcCCCChhHHHHHhc----CCceEEEecCCCC--------------------------CCcEEEcCCCCCC-
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNSI----GVADVTGVELMDS--------------------------LPLVSRADPHNLP- 143 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~~----~~~~v~~vD~s~~--------------------------~~~~~~~d~~~~~- 143 (209)
.+.++||=.| |+|..+.++.+. |. +|++++.++. .+.++.+|+.+.+
T Consensus 148 ~~~~~VLVTG-atG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 225 (508)
T 4f6l_B 148 RPLGNTLLTG-ATGFLGAYLIEALQGYSH-RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD 225 (508)
T ss_dssp CCCEEEEESC-TTSHHHHHHHHHTBTTEE-EEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSS
T ss_pred CCCCeEEEEC-CccchHHHHHHHHHhcCC-EEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCccccc
Confidence 3456788877 679999998772 43 8999887655 4568889988733
Q ss_pred C-CCCceeeEEcc
Q 028410 144 F-FDEAFDVAFTA 155 (209)
Q Consensus 144 ~-~~~~fD~i~~~ 155 (209)
+ ....+|+|+..
T Consensus 226 l~~~~~~D~Vih~ 238 (508)
T 4f6l_B 226 VVLPENMDTIIHA 238 (508)
T ss_dssp CCCSSCCSEEEEC
T ss_pred CCCccCCCEEEEC
Confidence 2 24678999875
No 447
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=48.32 E-value=78 Score=24.66 Aligned_cols=90 Identities=13% Similarity=0.085 Sum_probs=55.2
Q ss_pred CCCeEEEEcCCCC-----hhHHHHHhcCCceEEEecCCCC-------------CCcEEEcCCCCCC-----C-----CCC
Q 028410 96 NHSKVLCVSAGAG-----HEVMAFNSIGVADVTGVELMDS-------------LPLVSRADPHNLP-----F-----FDE 147 (209)
Q Consensus 96 ~~~~iLDiGcG~G-----~~~~~la~~~~~~v~~vD~s~~-------------~~~~~~~d~~~~~-----~-----~~~ 147 (209)
.+.++|=.|+++| ..+..+++.|. +|+.++.++. .+.++..|+.+.. + .-+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG 108 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4678898897643 34445555676 8888887742 2346778887742 0 114
Q ss_pred ceeeEEccc-chh---------hhCH--------------HHHHHHHHHhcccCcEEEEEEec
Q 028410 148 AFDVAFTAH-LAE---------ALFP--------------SRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 148 ~fD~i~~~~-~~~---------~~~~--------------~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
..|+++.+. +.. ..+. ..+.+.+.+.++++|.++.+...
T Consensus 109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~ 171 (293)
T 3grk_A 109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY 171 (293)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence 789998762 111 1111 23456667777888988776554
No 448
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=48.00 E-value=4.9 Score=33.64 Aligned_cols=85 Identities=15% Similarity=0.169 Sum_probs=48.5
Q ss_pred CCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCc--------EEEcCC--CCC-----------------CC
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPL--------VSRADP--HNL-----------------PF 144 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~--------~~~~d~--~~~-----------------~~ 144 (209)
++.+|+=+|+| ..+..+++ .|. +|+++|.++...+ +...+. ... .+
T Consensus 183 ~~~kV~ViG~G--~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l 259 (381)
T 3p2y_A 183 KPASALVLGVG--VAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL 259 (381)
T ss_dssp CCCEEEEESCS--HHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHH
T ss_pred CCCEEEEECch--HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence 57899999987 55555444 476 8999999976332 211110 000 00
Q ss_pred C--CCceeeEEcccc-hhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 145 F--DEAFDVAFTAHL-AEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 145 ~--~~~fD~i~~~~~-~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
. -...|+|+.... ...-.|.-+-+++.+.+|||++++-+
T Consensus 260 ~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 260 EDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred HHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 0 157899987421 11011222337888999998876544
No 449
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=47.96 E-value=16 Score=30.97 Aligned_cols=99 Identities=21% Similarity=0.179 Sum_probs=50.5
Q ss_pred CCCCeEEEEcCCCChhHHHHH----hcCCceEEEecCCCCCCcEEEcCC------------------CCCCC--CCCcee
Q 028410 95 FNHSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDSLPLVSRADP------------------HNLPF--FDEAFD 150 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la----~~~~~~v~~vD~s~~~~~~~~~d~------------------~~~~~--~~~~fD 150 (209)
..+.+.-=+|.| +.+..++ +.|+ +|+++|++++.++-+.... .++.+ .-...|
T Consensus 9 ~~~~~~~ViGlG--yvGlp~A~~La~~G~-~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aD 85 (431)
T 3ojo_A 9 HHGSKLTVVGLG--YIGLPTSIMFAKHGV-DVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASD 85 (431)
T ss_dssp ---CEEEEECCS--TTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCS
T ss_pred ccCCccEEEeeC--HHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCC
Confidence 445666666666 5555544 4577 9999999988544221110 00000 012468
Q ss_pred eEEccc-ch------hhhC---HHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHH
Q 028410 151 VAFTAH-LA------EALF---PSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVE 197 (209)
Q Consensus 151 ~i~~~~-~~------~~~~---~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~ 197 (209)
+|+..- .. ...| .....+.+.+.++||..+ +..+.......+.+.+
T Consensus 86 vvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iV-V~~STV~pgtt~~v~~ 141 (431)
T 3ojo_A 86 VFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTI-IVESTIAPKTMDDFVK 141 (431)
T ss_dssp EEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEE-EECSCCCTTHHHHTHH
T ss_pred EEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEE-EEecCCChhHHHHHHH
Confidence 877641 11 1112 355567888889887643 3433433334444444
No 450
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=47.92 E-value=61 Score=25.05 Aligned_cols=55 Identities=20% Similarity=0.315 Sum_probs=36.8
Q ss_pred CeEEEEcCCCChhHHHHHh----cCCceEEEecCCCC--------CCcEEEcCCCCCCCCCCce--eeEEcc
Q 028410 98 SKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDS--------LPLVSRADPHNLPFFDEAF--DVAFTA 155 (209)
Q Consensus 98 ~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~--------~~~~~~~d~~~~~~~~~~f--D~i~~~ 155 (209)
++||=.| |+|..+.++++ .|+ +|+++|.++. .+.++.+|+.+..+ ...+ |+|+..
T Consensus 1 m~vlVtG-atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~d~vih~ 69 (312)
T 3ko8_A 1 MRIVVTG-GAGFIGSHLVDKLVELGY-EVVVVDNLSSGRREFVNPSAELHVRDLKDYSW-GAGIKGDVVFHF 69 (312)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTC-EEEEECCCSSCCGGGSCTTSEEECCCTTSTTT-TTTCCCSEEEEC
T ss_pred CEEEEEC-CCChHHHHHHHHHHhCCC-EEEEEeCCCCCchhhcCCCceEEECccccHHH-HhhcCCCEEEEC
Confidence 3677777 56888887766 366 9999987654 34577888877542 1111 888874
No 451
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=47.84 E-value=12 Score=29.31 Aligned_cols=77 Identities=12% Similarity=0.051 Sum_probs=43.4
Q ss_pred CeEEEEcC-CCChhHHHHHh----cCCceEEEecCCCCCCcEEE---cCCCCCCCCCCceeeEEcccchhhhCHHHHHHH
Q 028410 98 SKVLCVSA-GAGHEVMAFNS----IGVADVTGVELMDSLPLVSR---ADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGE 169 (209)
Q Consensus 98 ~~iLDiGc-G~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~---~d~~~~~~~~~~fD~i~~~~~~~~~~~~~~l~~ 169 (209)
++|.=||+ | ..+..++. .|+ +|+++|.+++..+... .+..+..-.-...|+|+..--... ...++.+
T Consensus 12 m~I~iIG~tG--~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~--~~~v~~~ 86 (286)
T 3c24_A 12 KTVAILGAGG--KMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNI--IEKVAED 86 (286)
T ss_dssp CEEEEETTTS--HHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHH--HHHHHHH
T ss_pred CEEEEECCCC--HHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchH--HHHHHHH
Confidence 48999987 6 55555443 465 8999998865322110 011111111235788887432221 3566677
Q ss_pred HHHhcccCcE
Q 028410 170 MERTVKIGGV 179 (209)
Q Consensus 170 ~~r~LkpgG~ 179 (209)
+...++||..
T Consensus 87 l~~~l~~~~i 96 (286)
T 3c24_A 87 IVPRVRPGTI 96 (286)
T ss_dssp HGGGSCTTCE
T ss_pred HHHhCCCCCE
Confidence 7777777764
No 452
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=47.54 E-value=15 Score=29.39 Aligned_cols=97 Identities=11% Similarity=0.078 Sum_probs=53.7
Q ss_pred CCCCeEEEEcCCCChhHHHH----HhcCCceEEEecCCCCCCc------E-EEc-------CC---CCCCCCCCceeeEE
Q 028410 95 FNHSKVLCVSAGAGHEVMAF----NSIGVADVTGVELMDSLPL------V-SRA-------DP---HNLPFFDEAFDVAF 153 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~l----a~~~~~~v~~vD~s~~~~~------~-~~~-------d~---~~~~~~~~~fD~i~ 153 (209)
....+|.=+|+| ..+..+ ++.|. +|+.+ .+++.++ . ... .+ .+.. ....+|+|+
T Consensus 17 ~~~~kI~IiGaG--a~G~~~a~~L~~~G~-~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~D~vi 91 (318)
T 3hwr_A 17 FQGMKVAIMGAG--AVGCYYGGMLARAGH-EVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPS-AVQGADLVL 91 (318)
T ss_dssp ---CEEEEESCS--HHHHHHHHHHHHTTC-EEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGG-GGTTCSEEE
T ss_pred ccCCcEEEECcC--HHHHHHHHHHHHCCC-eEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHH-HcCCCCEEE
Confidence 456789999887 444444 44565 88888 6654221 0 000 00 0111 124689888
Q ss_pred cccchhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhc
Q 028410 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (209)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~ 200 (209)
..--.. +..++++++...++|+..++.+....+ ....+.+.|.
T Consensus 92 lavk~~--~~~~~l~~l~~~l~~~~~iv~~~nGi~--~~~~l~~~~~ 134 (318)
T 3hwr_A 92 FCVKST--DTQSAALAMKPALAKSALVLSLQNGVE--NADTLRSLLE 134 (318)
T ss_dssp ECCCGG--GHHHHHHHHTTTSCTTCEEEEECSSSS--HHHHHHHHCC
T ss_pred EEcccc--cHHHHHHHHHHhcCCCCEEEEeCCCCC--cHHHHHHHcC
Confidence 742121 457788889899999887655544433 2246666764
No 453
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=46.68 E-value=13 Score=29.48 Aligned_cols=68 Identities=12% Similarity=0.042 Sum_probs=40.8
Q ss_pred CeEEEEc-CCCChhHHHHHh----cCCceEEEecCCCCCCcEEEcCCCCCCCCCCceeeEEcccchhhhCHHHHHHHHHH
Q 028410 98 SKVLCVS-AGAGHEVMAFNS----IGVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEMER 172 (209)
Q Consensus 98 ~~iLDiG-cG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~~l~~~~r 172 (209)
.+|.=|| +| ..+..++. .|+ +|+++|.++.. + ..-.-...|+|+..--.. ....++.++..
T Consensus 22 ~~I~iIGg~G--~mG~~la~~l~~~G~-~V~~~~~~~~~------~---~~~~~~~aDvVilavp~~--~~~~vl~~l~~ 87 (298)
T 2pv7_A 22 HKIVIVGGYG--KLGGLFARYLRASGY-PISILDREDWA------V---AESILANADVVIVSVPIN--LTLETIERLKP 87 (298)
T ss_dssp CCEEEETTTS--HHHHHHHHHHHTTTC-CEEEECTTCGG------G---HHHHHTTCSEEEECSCGG--GHHHHHHHHGG
T ss_pred CEEEEEcCCC--HHHHHHHHHHHhCCC-eEEEEECCccc------C---HHHHhcCCCEEEEeCCHH--HHHHHHHHHHh
Confidence 4788887 65 56555554 465 89999987642 1 100013568887642111 25666777777
Q ss_pred hcccCcE
Q 028410 173 TVKIGGV 179 (209)
Q Consensus 173 ~LkpgG~ 179 (209)
.++||..
T Consensus 88 ~l~~~~i 94 (298)
T 2pv7_A 88 YLTENML 94 (298)
T ss_dssp GCCTTSE
T ss_pred hcCCCcE
Confidence 7887764
No 454
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=46.05 E-value=4.4 Score=32.03 Aligned_cols=97 Identities=9% Similarity=0.019 Sum_probs=52.6
Q ss_pred CeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEEc--------------C---------------CCCCCC
Q 028410 98 SKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSRA--------------D---------------PHNLPF 144 (209)
Q Consensus 98 ~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~~--------------d---------------~~~~~~ 144 (209)
.+|.=||+| ..+..++. .|+ +|+.+|.+++.++-... . ..++.-
T Consensus 5 ~kV~VIGaG--~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~ 81 (283)
T 4e12_A 5 TNVTVLGTG--VLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ 81 (283)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred CEEEEECCC--HHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence 467778776 55555544 576 99999999864331100 0 011110
Q ss_pred CCCceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhc
Q 028410 145 FDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (209)
Q Consensus 145 ~~~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~ 200 (209)
.-...|+|+..-....-....+++++...++|+..+ +...+ ......+.+.+.
T Consensus 82 ~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il--~s~tS-~~~~~~la~~~~ 134 (283)
T 4e12_A 82 AVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIF--ATNSS-TLLPSDLVGYTG 134 (283)
T ss_dssp HTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEE--EECCS-SSCHHHHHHHHS
T ss_pred HhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEE--EECCC-CCCHHHHHhhcC
Confidence 014578887742221112467788899999998753 22222 223455555443
No 455
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=45.72 E-value=36 Score=26.65 Aligned_cols=89 Identities=13% Similarity=-0.011 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCCChhHHHHH----hcCCceEEEecCCCC----------------CCcEEEcCCCCCC-----C-----C
Q 028410 96 NHSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDS----------------LPLVSRADPHNLP-----F-----F 145 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la----~~~~~~v~~vD~s~~----------------~~~~~~~d~~~~~-----~-----~ 145 (209)
.+.++|=.|++. ..+..++ +.|. +|+.+|.+.. .+.++.+|+.+.. + .
T Consensus 48 ~~k~vlVTGas~-GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTGGDS-GIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 467888888654 4454444 4576 8888877622 2335667776632 0 0
Q ss_pred CCceeeEEcccch----h---hhCH--------------HHHHHHHHHhcccCcEEEEEEec
Q 028410 146 DEAFDVAFTAHLA----E---ALFP--------------SRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 146 ~~~fD~i~~~~~~----~---~~~~--------------~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
-+..|+++.+.-. . ..+. ..+.+.+.+.++++|.++.+...
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~ 187 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI 187 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence 1468998875211 0 1111 23456666777888997776544
No 456
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=45.48 E-value=43 Score=24.88 Aligned_cols=58 Identities=16% Similarity=0.090 Sum_probs=40.3
Q ss_pred CCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCC--------CC-cEEEcCCCC-CCCCCCceeeEEcc
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDS--------LP-LVSRADPHN-LPFFDEAFDVAFTA 155 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~--------~~-~~~~~d~~~-~~~~~~~fD~i~~~ 155 (209)
.+++||=.| |+|..+..+++ .|+ +|++++.++. .+ .++.+|+.+ +.-.-+.+|+|+.+
T Consensus 20 ~~~~ilVtG-atG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ 91 (236)
T 3e8x_A 20 QGMRVLVVG-ANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFA 91 (236)
T ss_dssp -CCEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEEC
T ss_pred CCCeEEEEC-CCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEEC
Confidence 467899888 55777777765 476 9999998865 44 778889861 11112468999875
No 457
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=45.06 E-value=17 Score=28.24 Aligned_cols=97 Identities=9% Similarity=0.106 Sum_probs=50.4
Q ss_pred eEEEEcCCCChhHHHHHh----cCC-ceEEEecCCCCCCcEEE-cCC-----CCCCCCCC-ceeeEEcccchhhhCHHHH
Q 028410 99 KVLCVSAGAGHEVMAFNS----IGV-ADVTGVELMDSLPLVSR-ADP-----HNLPFFDE-AFDVAFTAHLAEALFPSRF 166 (209)
Q Consensus 99 ~iLDiGcG~G~~~~~la~----~~~-~~v~~vD~s~~~~~~~~-~d~-----~~~~~~~~-~fD~i~~~~~~~~~~~~~~ 166 (209)
+|.=||+| ..+..++. .|. .+|+++|.+++..+... ... .++.-.-. ..|+|+..--.. ....+
T Consensus 3 ~I~iIG~G--~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~--~~~~v 78 (281)
T 2g5c_A 3 NVLIVGVG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR--TFREI 78 (281)
T ss_dssp EEEEESCS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH--HHHHH
T ss_pred EEEEEecC--HHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH--HHHHH
Confidence 57778765 56555544 343 27999999865332110 000 11111113 678888742111 23466
Q ss_pred HHHHHHhcccCcEEEEEEecCCcccHHHHHHHhc
Q 028410 167 VGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (209)
Q Consensus 167 l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~ 200 (209)
+.++...+++|..++.+ ..........+.+.+.
T Consensus 79 ~~~l~~~l~~~~iv~~~-~~~~~~~~~~l~~~l~ 111 (281)
T 2g5c_A 79 AKKLSYILSEDATVTDQ-GSVKGKLVYDLENILG 111 (281)
T ss_dssp HHHHHHHSCTTCEEEEC-CSCCTHHHHHHHHHHG
T ss_pred HHHHHhhCCCCcEEEEC-CCCcHHHHHHHHHhcc
Confidence 77788889988754433 2222223344555554
No 458
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=44.78 E-value=61 Score=25.31 Aligned_cols=59 Identities=14% Similarity=-0.030 Sum_probs=39.6
Q ss_pred CCCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCC---------------CCCcEE-EcCCCCCCCC---CCceee
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMD---------------SLPLVS-RADPHNLPFF---DEAFDV 151 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~---------------~~~~~~-~~d~~~~~~~---~~~fD~ 151 (209)
.++.+||=.| |+|..+.++++ .|+ +|++++.++ ..+.++ .+|+.+...- -..+|+
T Consensus 9 ~~~~~vlVTG-atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 86 (342)
T 1y1p_A 9 PEGSLVLVTG-ANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG 86 (342)
T ss_dssp CTTCEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred CCCCEEEEEC-CccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence 4567899888 56788877765 466 899988763 234456 6888764311 136899
Q ss_pred EEcc
Q 028410 152 AFTA 155 (209)
Q Consensus 152 i~~~ 155 (209)
|+..
T Consensus 87 vih~ 90 (342)
T 1y1p_A 87 VAHI 90 (342)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9875
No 459
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=44.76 E-value=56 Score=26.85 Aligned_cols=82 Identities=13% Similarity=0.084 Sum_probs=51.2
Q ss_pred CCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCCc-----------------EEEcCCCCCCCCCCceeeEEcccch
Q 028410 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL-----------------VSRADPHNLPFFDEAFDVAFTAHLA 158 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~~-----------------~~~~d~~~~~~~~~~fD~i~~~~~~ 158 (209)
.+.+||.++.+.|..+..++..+ ++.+ +...+. +...+. +.-..+.+|+++.. +.
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~~---~~~~--~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~-lp 109 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEHK---PYSI--GDSYISELATRENLRLNGIDESSVKFLDS--TADYPQQPGVVLIK-VP 109 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGGC---CEEE--ESCHHHHHHHHHHHHHTTCCGGGSEEEET--TSCCCSSCSEEEEE-CC
T ss_pred CCCCEEEECCCCCHHHHhhccCC---ceEE--EhHHHHHHHHHHHHHHcCCCccceEeccc--ccccccCCCEEEEE-cC
Confidence 45789999999999999887643 2333 112110 111111 11234679998873 33
Q ss_pred hhh-CHHHHHHHHHHhcccCcEEEEEEe
Q 028410 159 EAL-FPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 159 ~~~-~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
... .....+..+...|+||+.+++.-.
T Consensus 110 k~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 110 KTLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp SCHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 333 457778899999999999755544
No 460
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=44.73 E-value=38 Score=25.61 Aligned_cols=88 Identities=15% Similarity=0.040 Sum_probs=51.2
Q ss_pred CCCeEEEEcCCCChhHHHHH----h-cCCceEEEecCCCC--------------CCcEEEcCCCCCCC-----C-----C
Q 028410 96 NHSKVLCVSAGAGHEVMAFN----S-IGVADVTGVELMDS--------------LPLVSRADPHNLPF-----F-----D 146 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la----~-~~~~~v~~vD~s~~--------------~~~~~~~d~~~~~~-----~-----~ 146 (209)
++.+||=.|+ +|..+..++ + .|. +|+.++.++. .+.++.+|+.+..- . .
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4567887774 565665554 4 465 8888887642 34577888876420 0 1
Q ss_pred CceeeEEccc-chh---h-----hC-----------HHHHHHHHHHhcccCcEEEEEEe
Q 028410 147 EAFDVAFTAH-LAE---A-----LF-----------PSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 147 ~~fD~i~~~~-~~~---~-----~~-----------~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
+.+|+++.+. +.. . -+ +..+++.+.+.++++|+++.+..
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 3789998752 110 0 00 12344556666677788766644
No 461
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=44.62 E-value=12 Score=30.35 Aligned_cols=101 Identities=12% Similarity=0.103 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEE-Ec-CCCCCCCCCCceeeEEccc-c---hhhhCHHH
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVS-RA-DPHNLPFFDEAFDVAFTAH-L---AEALFPSR 165 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~-~~-d~~~~~~~~~~fD~i~~~~-~---~~~~~~~~ 165 (209)
.+.+|.=+|.| ..+..+++ .|. +|+++|.++...+.. .. ...++.---...|+|+.+- . ..++
T Consensus 136 ~gktvGIiGlG--~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~l---- 208 (324)
T 3evt_A 136 TGQQLLIYGTG--QIGQSLAAKASALGM-HVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHL---- 208 (324)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTC----
T ss_pred cCCeEEEECcC--HHHHHHHHHHHhCCC-EEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHh----
Confidence 36788888776 77777665 466 999999987643211 00 0011110013578887741 1 1111
Q ss_pred HHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 166 FVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 166 ~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
+-.+....+|||..++ -+....-.....+.+.++.-++
T Consensus 209 i~~~~l~~mk~gailI-N~aRG~~vd~~aL~~aL~~g~i 246 (324)
T 3evt_A 209 FSTELFQQTKQQPMLI-NIGRGPAVDTTALMTALDHHQL 246 (324)
T ss_dssp BSHHHHHTCCSCCEEE-ECSCGGGBCHHHHHHHHHTTSC
T ss_pred cCHHHHhcCCCCCEEE-EcCCChhhhHHHHHHHHHhCCc
Confidence 1145667789988753 3333334556667777665443
No 462
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=44.05 E-value=27 Score=27.02 Aligned_cols=97 Identities=15% Similarity=0.011 Sum_probs=51.3
Q ss_pred eEEEEcCCCC--hhHHHHHhcCCceEEEecCCCCCCc------EEEcCCCCCCCCCCceeeEEcccchhhhCHHHHHHHH
Q 028410 99 KVLCVSAGAG--HEVMAFNSIGVADVTGVELMDSLPL------VSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEM 170 (209)
Q Consensus 99 ~iLDiGcG~G--~~~~~la~~~~~~v~~vD~s~~~~~------~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~~l~~~ 170 (209)
+|.=+|+|.= ..+..+++ |+ +|+.+|.+++..+ ....+..+ .-...|+|+..--... ....++.++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~D~vi~~v~~~~-~~~~v~~~l 76 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFGSEAVPLE---RVAEARVIFTCLPTTR-EVYEVAEAL 76 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHCCEECCGG---GGGGCSEEEECCSSHH-HHHHHHHHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCCcccCHHH---HHhCCCEEEEeCCChH-HHHHHHHHH
Confidence 5777888742 23344555 76 8999998876432 11111111 1136798887422111 133456677
Q ss_pred HHhcccCcEEEEEEecCCcccHHHHHHHhccc
Q 028410 171 ERTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (209)
Q Consensus 171 ~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~ 202 (209)
...+++|..+ +............+.+.++..
T Consensus 77 ~~~l~~~~~v-v~~s~~~~~~~~~l~~~~~~~ 107 (289)
T 2cvz_A 77 YPYLREGTYW-VDATSGEPEASRRLAERLREK 107 (289)
T ss_dssp TTTCCTTEEE-EECSCCCHHHHHHHHHHHHTT
T ss_pred HhhCCCCCEE-EECCCCCHHHHHHHHHHHHHc
Confidence 7778877654 333333233345566666543
No 463
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=43.97 E-value=63 Score=30.92 Aligned_cols=92 Identities=12% Similarity=0.109 Sum_probs=59.7
Q ss_pred CCCCCeEEEEcCCCChhHHHHHhcCCceEEEecCCCCCC---------cEEEcCCCCCCC-CCCceeeEEcccc-----h
Q 028410 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP---------LVSRADPHNLPF-FDEAFDVAFTAHL-----A 158 (209)
Q Consensus 94 ~~~~~~iLDiGcG~G~~~~~la~~~~~~v~~vD~s~~~~---------~~~~~d~~~~~~-~~~~fD~i~~~~~-----~ 158 (209)
...+.++||+|.|+-.=-..|.. +...|+.+|+-|..- .+++.|.....+ ....+|.+.|.-. .
T Consensus 819 ~~~~~~~lDlGTGPE~RiLsLiP-~~~pvtm~D~RP~ae~~~~w~~~T~f~~~DyL~~~~~~~~~~D~vt~i~SLGAA~A 897 (1289)
T 1ej6_A 819 VYDGDVVLDLGTGPEAKILELIP-ATSPVTCVDIRPTAQPSGCWNVRTTFLELDYLSDGWITGVRGDIVTCMLSLGAAAA 897 (1289)
T ss_dssp CCTTCCEEEESCCSSCGGGGTSC-TTSCEEEEESSCCCSCSTTBSSCEEEEESCTTSSSCGGGCCCSEEEECSCHHHHHH
T ss_pred ecccceEEEccCCCcceeeeecC-CCCceEEecccCchhhhccccccceeeEccccccceeecCCCcEEEEEeechhhhh
Confidence 37789999998876543322222 245899999877632 388888877554 2356898888421 1
Q ss_pred h-hhCHHHHHHHHHHhcccCc--EEEEEEec
Q 028410 159 E-ALFPSRFVGEMERTVKIGG--VCMVLMEE 186 (209)
Q Consensus 159 ~-~~~~~~~l~~~~r~LkpgG--~lil~~~~ 186 (209)
. .++..+.++++.+.+++.| ++++-.+.
T Consensus 898 ~a~~tl~~~~~q~l~~~~~~~~~~l~lQlNc 928 (1289)
T 1ej6_A 898 GKSMTFDAAFQQLIKVLSKSTANVVLVQVNC 928 (1289)
T ss_dssp HHTCCHHHHHHHHHHHHHTSCCSEEEEECCC
T ss_pred ccCCcHHHHHHHHHHHHHhcCccEEEEEecC
Confidence 1 2256888899988888755 44444444
No 464
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=43.60 E-value=39 Score=25.91 Aligned_cols=88 Identities=9% Similarity=-0.022 Sum_probs=50.6
Q ss_pred CCCeEEEEcCCCChhHHHHH----hcCCceEEEecCCCC-----------------CCcEEEcCCCCCC-----C-----
Q 028410 96 NHSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDS-----------------LPLVSRADPHNLP-----F----- 144 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la----~~~~~~v~~vD~s~~-----------------~~~~~~~d~~~~~-----~----- 144 (209)
.+.++|=.|++.| .+..++ +.|. +|+.++.+.. .+.++..|+.+.. +
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 4567888887655 455444 4565 7888765422 2346778887642 0
Q ss_pred CCCceeeEEcccc------hhhhC--------------HHHHHHHHHHhcccCcEEEEEEe
Q 028410 145 FDEAFDVAFTAHL------AEALF--------------PSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 145 ~~~~fD~i~~~~~------~~~~~--------------~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
.-+..|+++.+.- ....+ +..+.+.+.+.++++|.++.+..
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS 148 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIAT 148 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECC
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEec
Confidence 0147899988521 00111 12344566666777888776644
No 465
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=43.59 E-value=42 Score=26.56 Aligned_cols=59 Identities=15% Similarity=0.008 Sum_probs=40.1
Q ss_pred CCCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCC--CCcEEEcCCCCCCC---CCCceeeEEcc
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDS--LPLVSRADPHNLPF---FDEAFDVAFTA 155 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~--~~~~~~~d~~~~~~---~~~~fD~i~~~ 155 (209)
.++++||=.| |+|..+.++++ .|+ +|++++.++. .+.++.+|+.+... .-..+|+|+..
T Consensus 17 ~~~~~vlVtG-atG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 84 (347)
T 4id9_A 17 RGSHMILVTG-SAGRVGRAVVAALRTQGR-TVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHL 84 (347)
T ss_dssp ----CEEEET-TTSHHHHHHHHHHHHTTC-CEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEEC
T ss_pred cCCCEEEEEC-CCChHHHHHHHHHHhCCC-EEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEEC
Confidence 4567899888 67888888776 366 8999998764 56788899877431 01368888864
No 466
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=42.83 E-value=8.5 Score=31.69 Aligned_cols=84 Identities=11% Similarity=-0.030 Sum_probs=47.0
Q ss_pred CCeEEEEcCCCChhHHHHH----hcCCceEEEecCCCCCCcEEEcCC------C--CCC----C-C-----CCceeeEEc
Q 028410 97 HSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDSLPLVSRADP------H--NLP----F-F-----DEAFDVAFT 154 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la----~~~~~~v~~vD~s~~~~~~~~~d~------~--~~~----~-~-----~~~fD~i~~ 154 (209)
.++|.=+|+| .++..++ +.|+ +|+.+|.+++.++-+...- . .++ . . -...|+|+.
T Consensus 29 ~mkI~VIGaG--~mG~alA~~La~~G~-~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVil 105 (356)
T 3k96_A 29 KHPIAILGAG--SWGTALALVLARKGQ-KVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILI 105 (356)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHTTTC-CEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEE
T ss_pred CCeEEEECcc--HHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEE
Confidence 4689999886 5555544 4565 8999998865332111100 0 011 0 0 134677776
Q ss_pred ccchhhhCHHHHHHHHHHhcccCcEEEEEEe
Q 028410 155 AHLAEALFPSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 155 ~~~~~~~~~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
.--. ....++++++...++|+..++.+..
T Consensus 106 aVp~--~~~~~vl~~i~~~l~~~~ivvs~~k 134 (356)
T 3k96_A 106 VVPS--FAFHEVITRMKPLIDAKTRIAWGTK 134 (356)
T ss_dssp CCCH--HHHHHHHHHHGGGCCTTCEEEECCC
T ss_pred CCCH--HHHHHHHHHHHHhcCCCCEEEEEeC
Confidence 3211 1346777888888888876544443
No 467
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=42.65 E-value=43 Score=26.48 Aligned_cols=100 Identities=17% Similarity=0.087 Sum_probs=55.6
Q ss_pred CeEEEEcCCCC--hhHHHHHhcCCceEEEecCCCCCCc------E-EEc---CCC--CCC-----CCCCceeeEEcccch
Q 028410 98 SKVLCVSAGAG--HEVMAFNSIGVADVTGVELMDSLPL------V-SRA---DPH--NLP-----FFDEAFDVAFTAHLA 158 (209)
Q Consensus 98 ~~iLDiGcG~G--~~~~~la~~~~~~v~~vD~s~~~~~------~-~~~---d~~--~~~-----~~~~~fD~i~~~~~~ 158 (209)
++|.=+|+|.- .++..|++.|. +|+.++.++. + . +.. +.. ... -....+|+|+..-=.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~~--~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~D~vilavk~ 79 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRRDY--EAIAGNGLKVFSINGDFTLPHVKGYRAPEEIGPMDLVLVGLKT 79 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECSTTH--HHHHHTCEEEEETTCCEEESCCCEESCHHHHCCCSEEEECCCG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcCcH--HHHHhCCCEEEcCCCeEEEeeceeecCHHHcCCCCEEEEecCC
Confidence 46888888743 33444455565 8999988751 2 1 111 110 000 011468988874211
Q ss_pred hhhCHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 159 EALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 159 ~~~~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
. +..++++++...++|+..++.+.+..+ ....+.+.|....+
T Consensus 80 ~--~~~~~l~~l~~~l~~~~~iv~l~nGi~--~~~~l~~~~~~~~v 121 (312)
T 3hn2_A 80 F--ANSRYEELIRPLVEEGTQILTLQNGLG--NEEALATLFGAERI 121 (312)
T ss_dssp G--GGGGHHHHHGGGCCTTCEEEECCSSSS--HHHHHHHHTCGGGE
T ss_pred C--CcHHHHHHHHhhcCCCCEEEEecCCCC--cHHHHHHHCCCCcE
Confidence 1 234678888889999887555444432 34567777765543
No 468
>2yjg_A Lactate racemase apoprotein; isomerase, nickel-dependent enzyme; 1.80A {Thermoanaerobacterium thermosaccharolyorganism_taxid}
Probab=48.41 E-value=5.3 Score=34.08 Aligned_cols=52 Identities=19% Similarity=0.238 Sum_probs=33.8
Q ss_pred CceeeEEccc----chhhh-CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHH
Q 028410 147 EAFDVAFTAH----LAEAL-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVEL 198 (209)
Q Consensus 147 ~~fD~i~~~~----~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l 198 (209)
..+|+++.+. .+..+ +..+.+.....++|+||.++++....+......+.+.
T Consensus 275 ~~~DvvI~s~gG~P~d~n~yqa~Kal~~a~~~v~~GG~iIl~a~c~~g~G~~~f~~~ 331 (436)
T 2yjg_A 275 KPADIVITSNGGYPLDQNIYQSVKGMTAGEAACKDGGVIIIAAECADGHGGEGFYRW 331 (436)
Confidence 6779998642 11222 3467788888999999999888776544333333333
No 469
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=42.28 E-value=14 Score=29.35 Aligned_cols=98 Identities=12% Similarity=0.117 Sum_probs=52.9
Q ss_pred CCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcE-------E-EcCCCCCCCCCCceeeEEcccchhhhCHH
Q 028410 97 HSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLV-------S-RADPHNLPFFDEAFDVAFTAHLAEALFPS 164 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~-------~-~~d~~~~~~~~~~fD~i~~~~~~~~~~~~ 164 (209)
.++|.=||+| ..+..++. .|+ +|+++|.+++..+- . ..+..+. -...|+|+..--.. ....
T Consensus 7 ~~~I~iIG~G--~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~---~~~aDvvi~~vp~~-~~~~ 79 (303)
T 3g0o_A 7 DFHVGIVGLG--SMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAASAREF---AGVVDALVILVVNA-AQVR 79 (303)
T ss_dssp CCEEEEECCS--HHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSSTTT---TTTCSEEEECCSSH-HHHH
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCHHHH---HhcCCEEEEECCCH-HHHH
Confidence 4678888776 66666554 476 89999998764331 1 2222222 24568888742111 1123
Q ss_pred HHH---HHHHHhcccCcEEEEEEecCCcccHHHHHHHhccc
Q 028410 165 RFV---GEMERTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (209)
Q Consensus 165 ~~l---~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~ 202 (209)
.++ .++...++||..+ +............+.+.+...
T Consensus 80 ~v~~~~~~l~~~l~~g~iv-v~~st~~~~~~~~~~~~~~~~ 119 (303)
T 3g0o_A 80 QVLFGEDGVAHLMKPGSAV-MVSSTISSADAQEIAAALTAL 119 (303)
T ss_dssp HHHC--CCCGGGSCTTCEE-EECSCCCHHHHHHHHHHHHTT
T ss_pred HHHhChhhHHhhCCCCCEE-EecCCCCHHHHHHHHHHHHHc
Confidence 333 4556777887654 333333333444555555443
No 470
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=42.12 E-value=24 Score=26.22 Aligned_cols=83 Identities=12% Similarity=-0.028 Sum_probs=46.8
Q ss_pred CCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEEcCCCCCC-----C-CCCceeeEEcccc-h------
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSRADPHNLP-----F-FDEAFDVAFTAHL-A------ 158 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~~d~~~~~-----~-~~~~fD~i~~~~~-~------ 158 (209)
.+.++|=.|++ |..+.++++ .|. +|+.++.++. .|+.+.. + .-+..|+++.+.- .
T Consensus 5 ~~k~vlVTGas-~gIG~~~a~~l~~~G~-~V~~~~r~~~------~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~ 76 (223)
T 3uce_A 5 DKTVYVVLGGT-SGIGAELAKQLESEHT-IVHVASRQTG------LDISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKV 76 (223)
T ss_dssp CCEEEEEETTT-SHHHHHHHHHHCSTTE-EEEEESGGGT------CCTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCT
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEecCCcc------cCCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCc
Confidence 35677878865 455555554 454 8888887655 3444321 0 0146888887521 1
Q ss_pred hhhC--------------HHHHHHHHHHhcccCcEEEEEEec
Q 028410 159 EALF--------------PSRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 159 ~~~~--------------~~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
...+ +..+.+.+.+.++++|.++.+...
T Consensus 77 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~ 118 (223)
T 3uce_A 77 VDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM 118 (223)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred ccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence 0011 123456666777888887666543
No 471
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=41.56 E-value=55 Score=25.15 Aligned_cols=90 Identities=14% Similarity=0.090 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCCCC---hhHHHHHhcCCceEEEecCCCC---------------CCcEEEcCCCCCCC----------CC
Q 028410 95 FNHSKVLCVSAGAG---HEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPF----------FD 146 (209)
Q Consensus 95 ~~~~~iLDiGcG~G---~~~~~la~~~~~~v~~vD~s~~---------------~~~~~~~d~~~~~~----------~~ 146 (209)
..+.++|=.|++.| ..+..+++.|. +|+.++.... .+.++..|+.+..- .-
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45678888887655 23344445576 7776643322 23366788876420 01
Q ss_pred CceeeEEccc-c-----hhhhC--------------HHHHHHHHHHhcccCcEEEEEEe
Q 028410 147 EAFDVAFTAH-L-----AEALF--------------PSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 147 ~~fD~i~~~~-~-----~~~~~--------------~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
+..|+++.+. + ....+ +..+++.+.+.++++|.++.+..
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 4789998862 1 00111 13345677778888898766654
No 472
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=41.38 E-value=9.6 Score=32.54 Aligned_cols=82 Identities=20% Similarity=0.202 Sum_probs=46.8
Q ss_pred CCeEEEEcCCCC--hhHHHHHhcCCceEEEecCCCCCCcEE-------------Ec--C-----------CCCCCCCCCc
Q 028410 97 HSKVLCVSAGAG--HEVMAFNSIGVADVTGVELMDSLPLVS-------------RA--D-----------PHNLPFFDEA 148 (209)
Q Consensus 97 ~~~iLDiGcG~G--~~~~~la~~~~~~v~~vD~s~~~~~~~-------------~~--d-----------~~~~~~~~~~ 148 (209)
-.+|.=||+|.= ..+..++..|+ +|+.+|.+++.++-. .+ + ..++. .-..
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~-~~~~ 114 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK-ELST 114 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGG-GGTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHH-HHCC
Confidence 357889988741 23334444576 899999987633210 00 0 01111 1145
Q ss_pred eeeEEcccchhhh-CHHHHHHHHHHhcccCcEEE
Q 028410 149 FDVAFTAHLAEAL-FPSRFVGEMERTVKIGGVCM 181 (209)
Q Consensus 149 fD~i~~~~~~~~~-~~~~~l~~~~r~LkpgG~li 181 (209)
.|+|+..- .+.. -...++.++...++||..++
T Consensus 115 aDlVIeaV-pe~~~~k~~v~~~l~~~~~~~~ii~ 147 (463)
T 1zcj_A 115 VDLVVEAV-FEDMNLKKKVFAELSALCKPGAFLC 147 (463)
T ss_dssp CSEEEECC-CSCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred CCEEEEcC-CCCHHHHHHHHHHHHhhCCCCeEEE
Confidence 78887743 2222 23677888989999887643
No 473
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=40.86 E-value=55 Score=25.86 Aligned_cols=58 Identities=16% Similarity=0.080 Sum_probs=41.2
Q ss_pred CCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCC-------------------CCCcEEEcCCCCCCC---CCCce
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMD-------------------SLPLVSRADPHNLPF---FDEAF 149 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~-------------------~~~~~~~~d~~~~~~---~~~~f 149 (209)
.+++||=.| |+|..+.++++ .|+ +|++++.++ ..+.++.+|+.+... .-..+
T Consensus 24 ~~~~vlVtG-atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 24 SPKTWLITG-VAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCeEEEEC-CCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 467899888 67888888766 365 999998764 345678899877420 01368
Q ss_pred eeEEcc
Q 028410 150 DVAFTA 155 (209)
Q Consensus 150 D~i~~~ 155 (209)
|+|+..
T Consensus 102 d~Vih~ 107 (351)
T 3ruf_A 102 DHVLHQ 107 (351)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 999875
No 474
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=40.71 E-value=80 Score=24.85 Aligned_cols=56 Identities=18% Similarity=0.160 Sum_probs=38.5
Q ss_pred CCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCC-------------CCcEEEcCCCCCCCCCCceeeEEcc
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDS-------------LPLVSRADPHNLPFFDEAFDVAFTA 155 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~-------------~~~~~~~d~~~~~~~~~~fD~i~~~ 155 (209)
..++||=.| |+|..+..+++ .|+ +|++++.++. .++++.+|+.+..+ ..+|+|+..
T Consensus 26 ~~~~vlVtG-atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--~~~d~vih~ 98 (343)
T 2b69_A 26 DRKRILITG-GAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLY--IEVDQIYHL 98 (343)
T ss_dssp -CCEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCC--CCCSEEEEC
T ss_pred CCCEEEEEc-CccHHHHHHHHHHHHCCC-EEEEEeCCCccchhhhhhhccCCceEEEeCccCChhh--cCCCEEEEC
Confidence 457899888 56888888765 365 8999986532 23567778776543 358999874
No 475
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=40.48 E-value=9.4 Score=29.51 Aligned_cols=80 Identities=8% Similarity=0.042 Sum_probs=45.7
Q ss_pred CCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCc-------E-EEcCCCCCCCCCCceeeEEcccchhhhCHH
Q 028410 97 HSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPL-------V-SRADPHNLPFFDEAFDVAFTAHLAEALFPS 164 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~-------~-~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~ 164 (209)
+++|.=+|+| ..+..++. .|+..|+.+|.+++..+ . ...+..+. -...|+|+..--... ..
T Consensus 10 ~m~i~iiG~G--~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~Dvvi~av~~~~--~~ 82 (266)
T 3d1l_A 10 DTPIVLIGAG--NLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEV---NPYAKLYIVSLKDSA--FA 82 (266)
T ss_dssp GCCEEEECCS--HHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGS---CSCCSEEEECCCHHH--HH
T ss_pred CCeEEEEcCC--HHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHH---hcCCCEEEEecCHHH--HH
Confidence 4678889886 55555544 46633889998865322 1 11222221 135799887532221 25
Q ss_pred HHHHHHHHhcccCcEEEEE
Q 028410 165 RFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 165 ~~l~~~~r~LkpgG~lil~ 183 (209)
+++.++...+++|..++-+
T Consensus 83 ~v~~~l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 83 ELLQGIVEGKREEALMVHT 101 (266)
T ss_dssp HHHHHHHTTCCTTCEEEEC
T ss_pred HHHHHHHhhcCCCcEEEEC
Confidence 6667777777777654333
No 476
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=40.37 E-value=74 Score=24.29 Aligned_cols=55 Identities=11% Similarity=-0.103 Sum_probs=36.6
Q ss_pred eEEEEcCCCChhHHHHHh----c-CCceEEEecCCCC--------CCcEEEcCCCCCC---CCCCceeeEEcc
Q 028410 99 KVLCVSAGAGHEVMAFNS----I-GVADVTGVELMDS--------LPLVSRADPHNLP---FFDEAFDVAFTA 155 (209)
Q Consensus 99 ~iLDiGcG~G~~~~~la~----~-~~~~v~~vD~s~~--------~~~~~~~d~~~~~---~~~~~fD~i~~~ 155 (209)
+||=.| |+|..+..+++ . |. +|++++.++. .++++.+|+.+.. -.-..+|.|+..
T Consensus 2 ~ilVtG-atG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~ 72 (289)
T 3e48_A 2 NIMLTG-ATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFI 72 (289)
T ss_dssp CEEEET-TTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred EEEEEc-CCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence 577777 56888877765 2 44 8888877654 3457888987732 011357999875
No 477
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=40.36 E-value=32 Score=27.85 Aligned_cols=98 Identities=10% Similarity=0.013 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEEcCCCCCCCC--CCceeeEEccc-c---hhhh-CHH
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSRADPHNLPFF--DEAFDVAFTAH-L---AEAL-FPS 164 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~~d~~~~~~~--~~~fD~i~~~~-~---~~~~-~~~ 164 (209)
.+.+|.=+|.| ..+..+++ .|. +|+++|.++... . ........+. -...|+|+.+- . ..++ +
T Consensus 144 ~g~~vgIiG~G--~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~-~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~-- 216 (333)
T 1dxy_A 144 GQQTVGVMGTG--HIGQVAIKLFKGFGA-KVIAYDPYPMKG-D-HPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIIN-- 216 (333)
T ss_dssp GGSEEEEECCS--HHHHHHHHHHHHTTC-EEEEECSSCCSS-C-CTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBC--
T ss_pred CCCEEEEECcC--HHHHHHHHHHHHCCC-EEEEECCCcchh-h-HhccccCCHHHHHhcCCEEEEcCCCchhHHHHhC--
Confidence 35788888765 78877776 365 899999887543 1 0000000111 13568887741 1 1112 2
Q ss_pred HHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 165 RFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 165 ~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
.+....+|||+.++- +...+-.....+.+.++.-++
T Consensus 217 ---~~~l~~mk~ga~lIn-~srg~~vd~~aL~~aL~~g~i 252 (333)
T 1dxy_A 217 ---EAAFNLMKPGAIVIN-TARPNLIDTQAMLSNLKSGKL 252 (333)
T ss_dssp ---HHHHHHSCTTEEEEE-CSCTTSBCHHHHHHHHHTTSE
T ss_pred ---HHHHhhCCCCcEEEE-CCCCcccCHHHHHHHHHhCCc
Confidence 345677899876543 333444566777777766544
No 478
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=40.00 E-value=53 Score=25.70 Aligned_cols=59 Identities=12% Similarity=0.039 Sum_probs=39.0
Q ss_pred CCCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCC--------------CcEEEcCCCCCC-----CCCCceee
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSL--------------PLVSRADPHNLP-----FFDEAFDV 151 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~--------------~~~~~~d~~~~~-----~~~~~fD~ 151 (209)
.++.+||=.| |+|..+..+++ .|+ +|++++.++.. +.++.+|+.+.. +....+|+
T Consensus 12 ~~~~~vlVTG-atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (335)
T 1rpn_A 12 SMTRSALVTG-ITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQE 89 (335)
T ss_dssp ---CEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred ccCCeEEEEC-CCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence 6789999888 67888888765 365 89999876542 346788887632 11124798
Q ss_pred EEcc
Q 028410 152 AFTA 155 (209)
Q Consensus 152 i~~~ 155 (209)
|+..
T Consensus 90 Vih~ 93 (335)
T 1rpn_A 90 VYNL 93 (335)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8874
No 479
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=40.00 E-value=1.2e+02 Score=23.12 Aligned_cols=67 Identities=13% Similarity=0.177 Sum_probs=42.9
Q ss_pred CCCeEEEEcCCC--ChhHHHHHhcCCceEEEecCCCCCCcEEEcCCCCCCCCCCceeeEEcccchhhhCHHHHHHHHHHh
Q 028410 96 NHSKVLCVSAGA--GHEVMAFNSIGVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEMERT 173 (209)
Q Consensus 96 ~~~~iLDiGcG~--G~~~~~la~~~~~~v~~vD~s~~~~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~~l~~~~r~ 173 (209)
+.++|.=||+|. +.++..+++.|+ +|+++|..+ .. ...| +++-... ....++.++...
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~-~V~~~~~~~-----------~~----~~aD-ilavP~~---ai~~vl~~l~~~ 64 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGH-YVTVLHAPE-----------DI----RDFE-LVVIDAH---GVEGYVEKLSAF 64 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTC-EEEECSSGG-----------GG----GGCS-EEEECSS---CHHHHHHHHHTT
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCC-EEEEecCHH-----------Hh----ccCC-EEEEcHH---HHHHHHHHHHHh
Confidence 457899999884 456666777787 999998731 11 2345 6663222 356677788888
Q ss_pred cccCcEEEE
Q 028410 174 VKIGGVCMV 182 (209)
Q Consensus 174 LkpgG~lil 182 (209)
++||..++-
T Consensus 65 l~~g~ivvd 73 (232)
T 3dfu_A 65 ARRGQMFLH 73 (232)
T ss_dssp CCTTCEEEE
T ss_pred cCCCCEEEE
Confidence 888776433
No 480
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=39.31 E-value=1.1e+02 Score=24.90 Aligned_cols=85 Identities=14% Similarity=0.061 Sum_probs=48.7
Q ss_pred CCCCeEEEEcCCCChhHHHHHh---cC-CceEEEecCCCCCCcEE-------EcCCCCCCCCCCceeeEEcccchhhhCH
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS---IG-VADVTGVELMDSLPLVS-------RADPHNLPFFDEAFDVAFTAHLAEALFP 163 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~---~~-~~~v~~vD~s~~~~~~~-------~~d~~~~~~~~~~fD~i~~~~~~~~~~~ 163 (209)
..+.+|+-.|+|+. +..+.. .+ ..-...+|.++....-. +...+. +.+...|.|+...-. ..
T Consensus 317 ~~gk~v~~yGa~~~--g~~l~~~~~~~~~~i~~~~D~~~~k~g~~~~g~~ipi~~p~~--~~~~~~d~vl~~~~~---~~ 389 (416)
T 4e2x_A 317 AEGRSVVGYGATAK--SATVTNFCGIGPDLVHSVYDTTPDKQNRLTPGAHIPVRPASA--FSDPYPDYALLFAWN---HA 389 (416)
T ss_dssp HTTCCEEEECCCSH--HHHHHHHHTCCTTTSCCEEESCGGGTTEECTTTCCEEEEGGG--CCSSCCSEEEESCGG---GH
T ss_pred HcCCeEEEEccccH--HHHHHHhcCCCcceeeEEEeCCccccCccCCCCCCcCCCHHH--HhhcCCCEEEEecch---hH
Confidence 56779999998853 333333 22 11334568777643311 111111 234567876552111 25
Q ss_pred HHHHHHHHHhcccCcEEEEEEec
Q 028410 164 SRFVGEMERTVKIGGVCMVLMEE 186 (209)
Q Consensus 164 ~~~l~~~~r~LkpgG~lil~~~~ 186 (209)
.++++++......||++++.+..
T Consensus 390 ~ei~~~~~~~~~~g~~~~~~~p~ 412 (416)
T 4e2x_A 390 EEIMAKEQEFHQAGGRWILYVPE 412 (416)
T ss_dssp HHHHHHCHHHHHTTCEEEECSSS
T ss_pred HHHHHHHHHHHhcCCEEEEECCc
Confidence 67778888888899998876654
No 481
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=38.93 E-value=90 Score=21.52 Aligned_cols=98 Identities=13% Similarity=0.040 Sum_probs=50.7
Q ss_pred CCCCeEEEEcCCC--ChhHHHHHh----cCCceEEEecCCCCCCc-E-EEcCCCCCCCCCCceeeEEcccchhhhCHHHH
Q 028410 95 FNHSKVLCVSAGA--GHEVMAFNS----IGVADVTGVELMDSLPL-V-SRADPHNLPFFDEAFDVAFTAHLAEALFPSRF 166 (209)
Q Consensus 95 ~~~~~iLDiGcG~--G~~~~~la~----~~~~~v~~vD~s~~~~~-~-~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~~ 166 (209)
....+|.=||.+. |..+..+++ .|+ +|+.++++...+. . ...++.+++ +..|+++..--. -...++
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~-~V~~vnp~~~~i~G~~~~~s~~el~---~~vDlvii~vp~--~~v~~v 85 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGF-EVLPVNPNYDEIEGLKCYRSVRELP---KDVDVIVFVVPP--KVGLQV 85 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTC-EEEEECTTCSEETTEECBSSGGGSC---TTCCEEEECSCH--HHHHHH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCC-EEEEeCCCCCeECCeeecCCHHHhC---CCCCEEEEEeCH--HHHHHH
Confidence 5678899999954 555555544 477 7888888754331 1 112333333 357888763211 123444
Q ss_pred HHHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 167 VGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 167 l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
+.++.+ +..++ +++ .... ..+++.+..++.++
T Consensus 86 ~~~~~~-~g~~~-i~~-~~~~---~~~~l~~~a~~~Gi 117 (138)
T 1y81_A 86 AKEAVE-AGFKK-LWF-QPGA---ESEEIRRFLEKAGV 117 (138)
T ss_dssp HHHHHH-TTCCE-EEE-CTTS---CCHHHHHHHHHHTC
T ss_pred HHHHHH-cCCCE-EEE-cCcc---HHHHHHHHHHHCCC
Confidence 555544 44444 222 2221 24566666665543
No 482
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=38.90 E-value=1.2e+02 Score=22.82 Aligned_cols=59 Identities=12% Similarity=0.048 Sum_probs=37.9
Q ss_pred CCCeEEEEcCCC-ChhHHHHHh----cCCceEEEecCCCC-------------CCcEEEcCCCCCC----------CCCC
Q 028410 96 NHSKVLCVSAGA-GHEVMAFNS----IGVADVTGVELMDS-------------LPLVSRADPHNLP----------FFDE 147 (209)
Q Consensus 96 ~~~~iLDiGcG~-G~~~~~la~----~~~~~v~~vD~s~~-------------~~~~~~~d~~~~~----------~~~~ 147 (209)
.+.++|=.|+++ |..+..+++ .|. +|+.+|.++. ...++..|+.+.. -.-+
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 356788888762 555655554 576 8999887761 1246778887632 0124
Q ss_pred ceeeEEcc
Q 028410 148 AFDVAFTA 155 (209)
Q Consensus 148 ~fD~i~~~ 155 (209)
..|+++.+
T Consensus 87 ~iD~lv~~ 94 (265)
T 1qsg_A 87 KFDGFVHS 94 (265)
T ss_dssp SEEEEEEC
T ss_pred CCCEEEEC
Confidence 78999886
No 483
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=38.26 E-value=9.2 Score=30.99 Aligned_cols=103 Identities=10% Similarity=0.019 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCc-EEE-cCCCCCCCCCCceeeEEccc-chhhhCHHHHH-
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPL-VSR-ADPHNLPFFDEAFDVAFTAH-LAEALFPSRFV- 167 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~-~~~-~d~~~~~~~~~~fD~i~~~~-~~~~~~~~~~l- 167 (209)
.+.+|.=+|.| ..+..+++ .|. +|++.|.++...+ +.. ....++.---...|+|+.+- .... ...++
T Consensus 138 ~g~tvGIiG~G--~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~--t~~li~ 212 (315)
T 3pp8_A 138 EEFSVGIMGAG--VLGAKVAESLQAWGF-PLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQ--TVGIIN 212 (315)
T ss_dssp TTCCEEEECCS--HHHHHHHHHHHTTTC-CEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGG--GTTCBS
T ss_pred CCCEEEEEeeC--HHHHHHHHHHHHCCC-EEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchh--hhhhcc
Confidence 36788888776 77777766 365 8999998876432 111 00011110013568887741 1110 11112
Q ss_pred HHHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 168 GEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 168 ~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
.+....+|||..+ +-+....-.....+.+.++.-++
T Consensus 213 ~~~l~~mk~gail-IN~aRG~~vd~~aL~~aL~~g~i 248 (315)
T 3pp8_A 213 SELLDQLPDGAYV-LNLARGVHVQEADLLAALDSGKL 248 (315)
T ss_dssp HHHHTTSCTTEEE-EECSCGGGBCHHHHHHHHHHTSE
T ss_pred HHHHhhCCCCCEE-EECCCChhhhHHHHHHHHHhCCc
Confidence 4566778888764 44443344556666666655443
No 484
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=38.22 E-value=49 Score=27.90 Aligned_cols=104 Identities=13% Similarity=0.114 Sum_probs=54.6
Q ss_pred CCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEEcCCCCCCCCCCceeeEEcccchhhhCHHHHH-HHH
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFV-GEM 170 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~~l-~~~ 170 (209)
.+.++.=+|.| ..+..+++ .|. +|++.|.++....-......++.---...|+|+.+--.. -....++ .+.
T Consensus 155 ~gktvGIIGlG--~IG~~vA~~l~~~G~-~V~~yd~~~~~~~~~~~~~~sl~ell~~aDvV~lhvPlt-~~T~~li~~~~ 230 (416)
T 3k5p_A 155 RGKTLGIVGYG--NIGSQVGNLAESLGM-TVRYYDTSDKLQYGNVKPAASLDELLKTSDVVSLHVPSS-KSTSKLITEAK 230 (416)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTC-EEEEECTTCCCCBTTBEECSSHHHHHHHCSEEEECCCC------CCBCHHH
T ss_pred CCCEEEEEeeC--HHHHHHHHHHHHCCC-EEEEECCcchhcccCcEecCCHHHHHhhCCEEEEeCCCC-HHHhhhcCHHH
Confidence 35688888775 77777766 466 999999876532100000111110013568887641100 0011111 456
Q ss_pred HHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 171 ERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 171 ~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
...+|||..+ +-+....-.....+.+.++.-++
T Consensus 231 l~~mk~gail-IN~aRG~vvd~~aL~~aL~~g~i 263 (416)
T 3k5p_A 231 LRKMKKGAFL-INNARGSDVDLEALAKVLQEGHL 263 (416)
T ss_dssp HHHSCTTEEE-EECSCTTSBCHHHHHHHHHTTSE
T ss_pred HhhCCCCcEE-EECCCChhhhHHHHHHHHHcCCc
Confidence 6778887764 34443444566677777765443
No 485
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=38.01 E-value=31 Score=28.20 Aligned_cols=100 Identities=11% Similarity=0.070 Sum_probs=44.9
Q ss_pred CCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCc-EEEcCCCCCCCCCCceeeEEcccchhhhCHHHHH-HH
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPL-VSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFV-GE 169 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~-~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~~l-~~ 169 (209)
.+.+|.=||.| ..+..+++ .|. +|++.|.++.... +.. ..++.---...|+|+.+- ...-....++ .+
T Consensus 170 ~gktiGIIGlG--~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~--~~sl~ell~~aDvVil~v-P~t~~t~~li~~~ 243 (340)
T 4dgs_A 170 KGKRIGVLGLG--QIGRALASRAEAFGM-SVRYWNRSTLSGVDWIA--HQSPVDLARDSDVLAVCV-AASAATQNIVDAS 243 (340)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHTTTC-EEEEECSSCCTTSCCEE--CSSHHHHHHTCSEEEECC-----------CHH
T ss_pred cCCEEEEECCC--HHHHHHHHHHHHCCC-EEEEEcCCcccccCcee--cCCHHHHHhcCCEEEEeC-CCCHHHHHHhhHH
Confidence 36788888876 77777766 365 8999998876421 111 111110013568887631 1100122333 56
Q ss_pred HHHhcccCcEEEEEEecCCcccHHHHHHHhccc
Q 028410 170 MERTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (209)
Q Consensus 170 ~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~ 202 (209)
....+|||..++ -+....-.....+.+.++.-
T Consensus 244 ~l~~mk~gailI-N~aRG~vvde~aL~~aL~~g 275 (340)
T 4dgs_A 244 LLQALGPEGIVV-NVARGNVVDEDALIEALKSG 275 (340)
T ss_dssp HHHHTTTTCEEE-ECSCC--------------C
T ss_pred HHhcCCCCCEEE-ECCCCcccCHHHHHHHHHcC
Confidence 777899988653 33332333444455555443
No 486
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=37.68 E-value=1.3e+02 Score=23.85 Aligned_cols=86 Identities=8% Similarity=-0.072 Sum_probs=51.6
Q ss_pred CCCeEEEEcCCCChhHHHHHhc--CCceEEEecCCCCC-------CcEEEcCCCCCC----CCCCceeeEEcccchhhhC
Q 028410 96 NHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSL-------PLVSRADPHNLP----FFDEAFDVAFTAHLAEALF 162 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~~--~~~~v~~vD~s~~~-------~~~~~~d~~~~~----~~~~~fD~i~~~~~~~~~~ 162 (209)
+..+++=+|+ |..+..+++. ..+.++.+|.+++. ..++.+|..+.. ..-+..|.++...-.. .
T Consensus 114 ~~~~viI~G~--G~~g~~l~~~L~~~g~v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d--~ 189 (336)
T 1lnq_A 114 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESD--S 189 (336)
T ss_dssp --CEEEEESC--CHHHHHHHTTGGGSCEEEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSH--H
T ss_pred ccCCEEEECC--cHHHHHHHHHHHhCCcEEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCcc--H
Confidence 3557888876 6888888772 11129999998763 347888887742 2235688887732111 1
Q ss_pred HHHHHHHHHHhcccCcEEEEEEe
Q 028410 163 PSRFVGEMERTVKIGGVCMVLME 185 (209)
Q Consensus 163 ~~~~l~~~~r~LkpgG~lil~~~ 185 (209)
..-......+.+.|...++.-..
T Consensus 190 ~n~~~~~~ar~~~~~~~iiar~~ 212 (336)
T 1lnq_A 190 ETIHCILGIRKIDESVRIIAEAE 212 (336)
T ss_dssp HHHHHHHHHHTTCTTSEEEEECS
T ss_pred HHHHHHHHHHHHCCCCeEEEEEC
Confidence 22233455667777777544443
No 487
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=37.30 E-value=29 Score=27.01 Aligned_cols=32 Identities=22% Similarity=0.277 Sum_probs=24.7
Q ss_pred CCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCC
Q 028410 97 HSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDS 130 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~ 130 (209)
..+||=.| |+|..+.++++ .|+ +|++++.++.
T Consensus 7 ~~~vlVtG-atG~iG~~l~~~L~~~g~-~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITG-GAGFIGGHLARALVASGE-EVTVLDDLRV 42 (321)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTC-CEEEECCCSS
T ss_pred CCeEEEEC-CCChHHHHHHHHHHHCCC-EEEEEecCCc
Confidence 57899888 66888888766 366 8999987654
No 488
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=37.16 E-value=12 Score=30.59 Aligned_cols=103 Identities=10% Similarity=0.031 Sum_probs=55.0
Q ss_pred CCCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEEcCC--CCCCCCCCceeeEEccc-chhhhCHHHHH
Q 028410 95 FNHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSRADP--HNLPFFDEAFDVAFTAH-LAEALFPSRFV 167 (209)
Q Consensus 95 ~~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~~d~--~~~~~~~~~fD~i~~~~-~~~~~~~~~~l 167 (209)
-.+.+|.=+|.| ..+..+++ .|. +|+++|.++.........+ .++.---...|+|+.+- .... ...++
T Consensus 163 l~g~tvgIIGlG--~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~--t~~li 237 (335)
T 2g76_A 163 LNGKTLGILGLG--RIGREVATRMQSFGM-KTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPS--TTGLL 237 (335)
T ss_dssp CTTCEEEEECCS--HHHHHHHHHHHTTTC-EEEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEECCCCCTT--TTTSB
T ss_pred CCcCEEEEEeEC--HHHHHHHHHHHHCCC-EEEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEecCCCHH--HHHhh
Confidence 346788888765 77777766 355 8999998765311000001 11110013578888741 1110 11112
Q ss_pred -HHHHHhcccCcEEEEEEecCCcccHHHHHHHhcccc
Q 028410 168 -GEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSS 203 (209)
Q Consensus 168 -~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~ 203 (209)
.+....+|||+.++=+ ....-.....+.+.++..+
T Consensus 238 ~~~~l~~mk~gailIN~-arg~vvd~~aL~~aL~~g~ 273 (335)
T 2g76_A 238 NDNTFAQCKKGVRVVNC-ARGGIVDEGALLRALQSGQ 273 (335)
T ss_dssp CHHHHTTSCTTEEEEEC-SCTTSBCHHHHHHHHHHTS
T ss_pred CHHHHhhCCCCcEEEEC-CCccccCHHHHHHHHHhCC
Confidence 4566788998864433 3333445566666666543
No 489
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=37.06 E-value=20 Score=28.01 Aligned_cols=100 Identities=14% Similarity=-0.007 Sum_probs=53.4
Q ss_pred CeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEEc-CCCCCC-CC--CCceeeEEcccchhhhCHHHHH--
Q 028410 98 SKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSRA-DPHNLP-FF--DEAFDVAFTAHLAEALFPSRFV-- 167 (209)
Q Consensus 98 ~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~~-d~~~~~-~~--~~~fD~i~~~~~~~~~~~~~~l-- 167 (209)
++|.=||+| ..+..++. .|+ +|+++|.+++..+-... .+.... .. -...|+|+..-- .......++
T Consensus 2 ~~i~iIG~G--~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp-~~~~~~~v~~~ 77 (287)
T 3pef_A 2 QKFGFIGLG--IMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLA-DPAAAEEVCFG 77 (287)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCS-SHHHHHHHHHS
T ss_pred CEEEEEeec--HHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcC-CHHHHHHHHcC
Confidence 467778775 66666654 476 99999999875542111 111000 00 124688876321 111234455
Q ss_pred -HHHHHhcccCcEEEEEEecCCcccHHHHHHHhccc
Q 028410 168 -GEMERTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (209)
Q Consensus 168 -~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~ 202 (209)
.++...+++|..+ +............+.+.+...
T Consensus 78 ~~~l~~~l~~~~~v-i~~st~~~~~~~~~~~~~~~~ 112 (287)
T 3pef_A 78 KHGVLEGIGEGRGY-VDMSTVDPATSQRIGVAVVAK 112 (287)
T ss_dssp TTCHHHHCCTTCEE-EECSCCCHHHHHHHHHHHHHT
T ss_pred cchHhhcCCCCCEE-EeCCCCCHHHHHHHHHHHHHh
Confidence 6677888887754 444433334445555555443
No 490
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=37.04 E-value=16 Score=31.17 Aligned_cols=56 Identities=16% Similarity=0.100 Sum_probs=39.1
Q ss_pred CCCeEEEEcCCCChhHHHHHh-c---CCceEEEecCCCCCC---------cEEEcCCCCCC----CCCCceeeEEc
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS-I---GVADVTGVELMDSLP---------LVSRADPHNLP----FFDEAFDVAFT 154 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~-~---~~~~v~~vD~s~~~~---------~~~~~d~~~~~----~~~~~fD~i~~ 154 (209)
+.++|+=+||| ..+..+++ . |+ +|+.+|.+++.+ .++.||..+.. ..-+..|++++
T Consensus 2 ~~M~iiI~G~G--~vG~~la~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 2 NAMKIIILGAG--QVGGTLAENLVGENN-DITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp CCEEEEEECCS--HHHHHHHHHTCSTTE-EEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred CcCEEEEECCC--HHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 46788888776 88888887 2 44 899999998733 36788887743 12245666665
No 491
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=37.04 E-value=4.7 Score=32.35 Aligned_cols=97 Identities=11% Similarity=-0.024 Sum_probs=50.1
Q ss_pred eEEEEcCCCChhHHHHH----hcCCceEEEecC--CCCCCcEEEcC--------------CC---CCCCCCCceeeEEcc
Q 028410 99 KVLCVSAGAGHEVMAFN----SIGVADVTGVEL--MDSLPLVSRAD--------------PH---NLPFFDEAFDVAFTA 155 (209)
Q Consensus 99 ~iLDiGcG~G~~~~~la----~~~~~~v~~vD~--s~~~~~~~~~d--------------~~---~~~~~~~~fD~i~~~ 155 (209)
+|.=+|+| ..+..++ +.|+ +|+.+|. +++..+.+... .. +..-.-...|+|+..
T Consensus 2 ~I~iiG~G--~mG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~ 78 (335)
T 1txg_A 2 IVSILGAG--AMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG 78 (335)
T ss_dssp EEEEESCC--HHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred EEEEECcC--HHHHHHHHHHHhCCC-eEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEc
Confidence 57778876 5554444 3466 8999998 65422211100 00 100001357888774
Q ss_pred cchhhhCHHHHHHHHHHhcccCcEEEEEEecC---CcccHHHHHHHhcc
Q 028410 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEEC---AGREIKQIVELFRT 201 (209)
Q Consensus 156 ~~~~~~~~~~~l~~~~r~LkpgG~lil~~~~~---~~~~~~~~~~l~~~ 201 (209)
--.. ....++.++.. ++||..++.+.... .......+.+.+..
T Consensus 79 v~~~--~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 79 VSTD--GVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp SCGG--GHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred CChH--HHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 2221 35667778888 88877654443232 11233445555543
No 492
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=36.81 E-value=1.6e+02 Score=23.35 Aligned_cols=58 Identities=22% Similarity=0.172 Sum_probs=39.9
Q ss_pred CCCeEEEEcCCCChhHHHHHh------cCCceEEEecCCCC---------------------CCcEEEcCCCCCC----C
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS------IGVADVTGVELMDS---------------------LPLVSRADPHNLP----F 144 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~------~~~~~v~~vD~s~~---------------------~~~~~~~d~~~~~----~ 144 (209)
.+++||=.| |+|..+.++++ .|+ +|+++|.++. .+.++.+|+.+.. .
T Consensus 9 ~~~~vlVTG-atG~IG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 86 (362)
T 3sxp_A 9 ENQTILITG-GAGFVGSNLAFHFQENHPKA-KVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL 86 (362)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHHCTTS-EEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHhhCCCC-eEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence 467899888 67888777654 344 9999987543 2247788887732 1
Q ss_pred CCCceeeEEcc
Q 028410 145 FDEAFDVAFTA 155 (209)
Q Consensus 145 ~~~~fD~i~~~ 155 (209)
....+|+|+..
T Consensus 87 ~~~~~D~vih~ 97 (362)
T 3sxp_A 87 EKLHFDYLFHQ 97 (362)
T ss_dssp TTSCCSEEEEC
T ss_pred hccCCCEEEEC
Confidence 24578999875
No 493
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=36.71 E-value=35 Score=28.63 Aligned_cols=31 Identities=16% Similarity=0.245 Sum_probs=20.8
Q ss_pred eEEEEcCCCChhHHH----HHhcCCceEEEecCCCCCC
Q 028410 99 KVLCVSAGAGHEVMA----FNSIGVADVTGVELMDSLP 132 (209)
Q Consensus 99 ~iLDiGcG~G~~~~~----la~~~~~~v~~vD~s~~~~ 132 (209)
+|.=||+| +.+.. +++.|+ +|+++|.+++.+
T Consensus 2 kI~VIG~G--~vG~~~A~~la~~G~-~V~~~d~~~~~~ 36 (436)
T 1mv8_A 2 RISIFGLG--YVGAVCAGCLSARGH-EVIGVDVSSTKI 36 (436)
T ss_dssp EEEEECCS--TTHHHHHHHHHHTTC-EEEEECSCHHHH
T ss_pred EEEEECCC--HHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 56777776 44444 444576 899999987643
No 494
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=36.69 E-value=15 Score=29.52 Aligned_cols=96 Identities=18% Similarity=0.064 Sum_probs=52.7
Q ss_pred CCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEEcCCCCCCCCCCceeeEEccc-chhhhCHHHHH-HH
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAH-LAEALFPSRFV-GE 169 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~~d~~~~~~~~~~fD~i~~~~-~~~~~~~~~~l-~~ 169 (209)
.+.+|.=+|+| ..+..+++ .|. +|+++|.++.... .+..++.---...|+|+.+- .... ...++ .+
T Consensus 143 ~g~~vgIIG~G--~IG~~~A~~l~~~G~-~V~~~d~~~~~~~---~~~~~l~ell~~aDvV~l~~p~~~~--t~~li~~~ 214 (311)
T 2cuk_A 143 QGLTLGLVGMG--RIGQAVAKRALAFGM-RVVYHARTPKPLP---YPFLSLEELLKEADVVSLHTPLTPE--THRLLNRE 214 (311)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTC-EEEEECSSCCSSS---SCBCCHHHHHHHCSEEEECCCCCTT--TTTCBCHH
T ss_pred CCCEEEEEEEC--HHHHHHHHHHHHCCC-EEEEECCCCcccc---cccCCHHHHHhhCCEEEEeCCCChH--HHhhcCHH
Confidence 45788888765 77777766 365 8999999876544 11111110013578888741 1100 01111 23
Q ss_pred HHHhcccCcEEEEEEecCCcccHHHHHHHhc
Q 028410 170 MERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (209)
Q Consensus 170 ~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~ 200 (209)
....+|||+.++=+ ....-.....+.+.++
T Consensus 215 ~l~~mk~ga~lin~-srg~~vd~~aL~~aL~ 244 (311)
T 2cuk_A 215 RLFAMKRGAILLNT-ARGALVDTEALVEALR 244 (311)
T ss_dssp HHTTSCTTCEEEEC-SCGGGBCHHHHHHHHT
T ss_pred HHhhCCCCcEEEEC-CCCCccCHHHHHHHHh
Confidence 45678998875433 3333334455666665
No 495
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=36.47 E-value=18 Score=29.41 Aligned_cols=100 Identities=9% Similarity=0.037 Sum_probs=53.5
Q ss_pred CCCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCc-EEEcCCCCCCCCCCceeeEEcccchhhhCHHHHH-HH
Q 028410 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPL-VSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFV-GE 169 (209)
Q Consensus 96 ~~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~-~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~~l-~~ 169 (209)
.+.+|.=||+| ..+..+++ .|. +|+++|.++.... +.. ..++.---...|+|+.+--... ....++ ++
T Consensus 163 ~g~~vgIIG~G--~iG~~vA~~l~~~G~-~V~~~dr~~~~~~g~~~--~~~l~ell~~aDvVil~vP~~~-~t~~li~~~ 236 (333)
T 3ba1_A 163 SGKRVGIIGLG--RIGLAVAERAEAFDC-PISYFSRSKKPNTNYTY--YGSVVELASNSDILVVACPLTP-ETTHIINRE 236 (333)
T ss_dssp TTCCEEEECCS--HHHHHHHHHHHTTTC-CEEEECSSCCTTCCSEE--ESCHHHHHHTCSEEEECSCCCG-GGTTCBCHH
T ss_pred CCCEEEEECCC--HHHHHHHHHHHHCCC-EEEEECCCchhccCcee--cCCHHHHHhcCCEEEEecCCCh-HHHHHhhHH
Confidence 35678888775 77777766 355 8999999876532 110 0111000135688877421100 011111 34
Q ss_pred HHHhcccCcEEEEEEecCCcccHHHHHHHhccc
Q 028410 170 MERTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (209)
Q Consensus 170 ~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~ 202 (209)
....+|||..+ +.+..........+.+.++..
T Consensus 237 ~l~~mk~gail-In~srG~~vd~~aL~~aL~~g 268 (333)
T 3ba1_A 237 VIDALGPKGVL-INIGRGPHVDEPELVSALVEG 268 (333)
T ss_dssp HHHHHCTTCEE-EECSCGGGBCHHHHHHHHHHT
T ss_pred HHhcCCCCCEE-EECCCCchhCHHHHHHHHHcC
Confidence 45677888765 344433344556666666654
No 496
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=35.27 E-value=49 Score=31.83 Aligned_cols=88 Identities=16% Similarity=0.102 Sum_probs=59.1
Q ss_pred CCeEEEEcCCCChhHHHHHhc-CCceEEEecCCCC----------CCcEEEcCCCCCCC-CCCceeeEEccc------ch
Q 028410 97 HSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------LPLVSRADPHNLPF-FDEAFDVAFTAH------LA 158 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~~-~~~~v~~vD~s~~----------~~~~~~~d~~~~~~-~~~~fD~i~~~~------~~ 158 (209)
+..+||+|.|+- .+-|.-. +...|+.+|.-|. +-++++.|.....+ -...+|.+.|.- ..
T Consensus 828 ~~~~lDLGTGPE--cRiLsliP~~~pvtmvD~RP~ae~~~~w~~~~T~yi~~DYl~~~~~~~~~~d~vtailSLGAA~a~ 905 (1299)
T 3iyl_W 828 LAHLLDLGTGPE--CRILSLIPPTLQVTMSDSRPCAELMASFDPALTAYVQGDYSTAAFWNGIRCDSATAIFTIGAAAAA 905 (1299)
T ss_dssp GCSEEEETCCSS--CSGGGSSCTTSCEEEEESSCCSSCGGGBCTTTEEEEESCSSSGGGGSSCCCSEEEETTTHHHHHHH
T ss_pred CCEEEEcCCCcc--ceeeecCCCCCceEEEecCCccccccccccccceeEEeccccceeEecCCCCEEEEeeechhhhhh
Confidence 489999987754 3334443 3458999998776 24588999877553 346789888841 12
Q ss_pred hhhCHHHHHHHHHHhcccCcE--EEEEEec
Q 028410 159 EALFPSRFVGEMERTVKIGGV--CMVLMEE 186 (209)
Q Consensus 159 ~~~~~~~~l~~~~r~LkpgG~--lil~~~~ 186 (209)
..++....++.+.+.+++.|. +++-.+.
T Consensus 906 a~~tl~~~l~~~l~~~~~~~v~~l~lQLN~ 935 (1299)
T 3iyl_W 906 AGTDLIAFVQQLIPRIVAAGGTRMWLQLNT 935 (1299)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred CCCcHHHHHHHHHHHHHhcCceEEEEEecC
Confidence 223678899999999988764 4444443
No 497
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=35.13 E-value=16 Score=30.29 Aligned_cols=102 Identities=11% Similarity=0.114 Sum_probs=54.6
Q ss_pred CCeEEEEcCCCChhHHHHHh----cCCceEEEecCCCCCCcEEEcCCCCCCCC--CCceeeEEccc-chhhhCHHHHH-H
Q 028410 97 HSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPLVSRADPHNLPFF--DEAFDVAFTAH-LAEALFPSRFV-G 168 (209)
Q Consensus 97 ~~~iLDiGcG~G~~~~~la~----~~~~~v~~vD~s~~~~~~~~~d~~~~~~~--~~~fD~i~~~~-~~~~~~~~~~l-~ 168 (209)
+.+|.=||.| ..+..+++ .|. +|++.|.++..-......+....+. -...|+|+.+- ... ....++ .
T Consensus 176 gktvGIIGlG--~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~--~T~~li~~ 250 (365)
T 4hy3_A 176 GSEIGIVGFG--DLGKALRRVLSGFRA-RIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAVTS--ENKRFLGA 250 (365)
T ss_dssp SSEEEEECCS--HHHHHHHHHHTTSCC-EEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCSSC--C---CCCH
T ss_pred CCEEEEecCC--cccHHHHHhhhhCCC-EEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCH--HHHhhcCH
Confidence 6788888765 78887776 355 8999998754211100011101111 13578887641 110 111112 4
Q ss_pred HHHHhcccCcEEEEEEecCCcccHHHHHHHhccccc
Q 028410 169 EMERTVKIGGVCMVLMEECAGREIKQIVELFRTSSF 204 (209)
Q Consensus 169 ~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~~~~~~ 204 (209)
+....+|||+.++=+.+ .+-.....+.+.++.-++
T Consensus 251 ~~l~~mk~gailIN~aR-G~~vde~aL~~aL~~g~i 285 (365)
T 4hy3_A 251 EAFSSMRRGAAFILLSR-ADVVDFDALMAAVSSGHI 285 (365)
T ss_dssp HHHHTSCTTCEEEECSC-GGGSCHHHHHHHHHTTSS
T ss_pred HHHhcCCCCcEEEECcC-CchhCHHHHHHHHHcCCc
Confidence 56788999987543333 334456667776665443
No 498
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=34.96 E-value=18 Score=37.64 Aligned_cols=90 Identities=14% Similarity=0.115 Sum_probs=56.5
Q ss_pred HHHhcccCCCCCeEEEEcC--CCChhHHHHHh-cCCceEEEecCCCCCCcEEEc-----------CCCCCC-------C-
Q 028410 87 HLQGKSLLFNHSKVLCVSA--GAGHEVMAFNS-IGVADVTGVELMDSLPLVSRA-----------DPHNLP-------F- 144 (209)
Q Consensus 87 ~l~~~~~~~~~~~iLDiGc--G~G~~~~~la~-~~~~~v~~vD~s~~~~~~~~~-----------d~~~~~-------~- 144 (209)
.+.....++++.+||=.|+ |.|..+..+++ .|. +|++++.+++..++... |..+.. .
T Consensus 1658 al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t 1736 (2512)
T 2vz8_A 1658 SLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHT 1736 (2512)
T ss_dssp HHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTT
T ss_pred HHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhc
Confidence 3444556789999999874 45666677777 575 88888876543222111 111111 1
Q ss_pred CCCceeeEEcccchhhhCHHHHHHHHHHhcccCcEEEEE
Q 028410 145 FDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (209)
Q Consensus 145 ~~~~fD~i~~~~~~~~~~~~~~l~~~~r~LkpgG~lil~ 183 (209)
....+|+|+..- . ...+....+.|+|||+++.+
T Consensus 1737 ~g~GvDvVld~~-----g-~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1737 AGKGVDLVLNSL-----A-EEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp TSCCEEEEEECC-----C-HHHHHHHHTTEEEEEEEEEC
T ss_pred CCCCceEEEECC-----C-chHHHHHHHhcCCCcEEEEe
Confidence 123589988632 1 35588889999999997665
No 499
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=34.50 E-value=10 Score=30.67 Aligned_cols=97 Identities=16% Similarity=0.054 Sum_probs=51.8
Q ss_pred CeEEEEcCCC--ChhHHHHHhcCCceEEEecCCCCCCcEEE-------------c----C------------CCCCCCCC
Q 028410 98 SKVLCVSAGA--GHEVMAFNSIGVADVTGVELMDSLPLVSR-------------A----D------------PHNLPFFD 146 (209)
Q Consensus 98 ~~iLDiGcG~--G~~~~~la~~~~~~v~~vD~s~~~~~~~~-------------~----d------------~~~~~~~~ 146 (209)
.+|-=||+|. +..+..+++.|+ +|+.+|.+++.++-.. + . ..++.-.-
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 5677888763 123333444577 9999999987443110 0 0 00110011
Q ss_pred CceeeEEcccchhhh-CHHHHHHHHHHhcccCcEEEEEEecCCcccHHHHHHHh
Q 028410 147 EAFDVAFTAHLAEAL-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELF 199 (209)
Q Consensus 147 ~~fD~i~~~~~~~~~-~~~~~l~~~~r~LkpgG~lil~~~~~~~~~~~~~~~l~ 199 (209)
...|+|+.+- .... -...++.++...++||..++ ...+ ......+.+.+
T Consensus 86 ~~aDlVieav-pe~~~~k~~v~~~l~~~~~~~~Ii~--s~tS-~i~~~~la~~~ 135 (319)
T 2dpo_A 86 EGVVHIQECV-PENLDLKRKIFAQLDSIVDDRVVLS--SSSS-CLLPSKLFTGL 135 (319)
T ss_dssp TTEEEEEECC-CSCHHHHHHHHHHHHTTCCSSSEEE--ECCS-SCCHHHHHTTC
T ss_pred hcCCEEEEec-cCCHHHHHHHHHHHHhhCCCCeEEE--EeCC-ChHHHHHHHhc
Confidence 4578887642 2211 23667888999999888533 2222 23444555444
No 500
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=34.47 E-value=73 Score=27.17 Aligned_cols=78 Identities=13% Similarity=0.126 Sum_probs=47.2
Q ss_pred CCeEEEEcCCC--ChhHHHHHhcCCceEEEecCCCCCC--------c--------------------EEEcCCCCCCCCC
Q 028410 97 HSKVLCVSAGA--GHEVMAFNSIGVADVTGVELMDSLP--------L--------------------VSRADPHNLPFFD 146 (209)
Q Consensus 97 ~~~iLDiGcG~--G~~~~~la~~~~~~v~~vD~s~~~~--------~--------------------~~~~d~~~~~~~~ 146 (209)
-.+|.=||+|. +..+..+++.|+ +|+.+|.+++.. + ....|. . .-
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl---~-al 128 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDF---H-KL 128 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCG---G-GC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCH---H-HH
Confidence 36788888874 233344455677 999999987610 0 011121 1 12
Q ss_pred CceeeEEcccchhhh-CHHHHHHHHHHhcccCcEE
Q 028410 147 EAFDVAFTAHLAEAL-FPSRFVGEMERTVKIGGVC 180 (209)
Q Consensus 147 ~~fD~i~~~~~~~~~-~~~~~l~~~~r~LkpgG~l 180 (209)
...|+|+..-. +.. -...+++++...++||..+
T Consensus 129 ~~aDlVIeAVp-e~~~vk~~v~~~l~~~~~~~aIl 162 (460)
T 3k6j_A 129 SNCDLIVESVI-EDMKLKKELFANLENICKSTCIF 162 (460)
T ss_dssp TTCSEEEECCC-SCHHHHHHHHHHHHTTSCTTCEE
T ss_pred ccCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCCEE
Confidence 45788877422 212 2467788999999998864
Done!