BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028413
(209 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7XDB8|LOGLA_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL10 OS=Oryza sativa subsp. japonica GN=LOGL10 PE=2
SV=1
Length = 204
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 19/161 (11%)
Query: 2 GPDHPHYLQSFELGGE-IARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAGE 60
G ++ + ELG E +AR +D + G GLM V++ G+ V G
Sbjct: 18 GKKRSYHDAAIELGNELVARSIDLV-YGGGSIGLMGLVSQAVFDGGRHV--------IGV 68
Query: 61 WTASNFHPYLPLETYLTCRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEIL 120
+ P + ET R + + A ++D A +ALPGG GTL+E+ E++
Sbjct: 69 IPKTLMTPEISGETVGEVRPVADMHQRKAEMARQSD-----AFIALPGGYGTLEELLEVI 123
Query: 121 ALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 161
QL P ++N D +Y LL F+ + G +
Sbjct: 124 TWAQL----GIHHKPVGLLNVDGYYNSLLTFIDKAVEEGFI 160
>sp|B9F166|LOGL2_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL2 OS=Oryza sativa subsp. japonica GN=LOGL2 PE=3 SV=1
Length = 244
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 22/178 (12%)
Query: 11 SFELGGE-IARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAGEWTASNFHPY 69
+ ELG E +AR +D + G GLM V++ G+ V G P
Sbjct: 41 AIELGKELVARNIDLV-YGGGSVGLMGLVSQAVHNGGRHVIGV---------IPKTLMPR 90
Query: 70 -LPLETYLTCRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERI 128
+ ET + S + A ++D A +ALPGG GTL+E+ E++A QL
Sbjct: 91 EISGETVGEVKAVSDMHQRKAEMARQSD-----AFIALPGGYGTLEELLEVIAWAQLGIH 145
Query: 129 GSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEF 186
P ++N D +Y LL F+ + G + + + + + E + L E+
Sbjct: 146 DK----PVGLLNVDGYYNPLLSFIDKAVEEGFI-RPSARHIIVLAPTPKELIEKLEEY 198
>sp|P46378|FAS6_RHOFA LOG family protein ORF6 in fasciation locus OS=Rhodococcus fascians
GN=fas6 PE=2 SV=1
Length = 198
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 32/147 (21%)
Query: 14 LGGEIARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAGEWTASNFHPYLPLE 73
+G IAR + GA GLM + A+ +G G VG +TA +P
Sbjct: 43 MGRAIARSKLRLVYGGARVGLMGTLANAALDSG----GTVVGVIPESFTA------IP-- 90
Query: 74 TYLTCRFFSARKHGLIDCAVRNDSCDRTAV--------VALPGGVGTLDEMFEILALIQL 125
A HGL + V +D R A+ +ALPGGVGT +E FE+L L
Sbjct: 91 --------EAAHHGLTELHVVHDMHQRKALMAELGDAFIALPGGVGTAEEFFEVLTWSHL 142
Query: 126 ERIGSELPVPFLVMNYDSFYKKLLDFL 152
P +++N + +Y+ LL ++
Sbjct: 143 GLHNK----PCVLLNDNEYYRPLLSYI 165
>sp|Q8GW29|LOG7_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7
OS=Arabidopsis thaliana GN=LOG7 PE=1 SV=2
Length = 217
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 24/186 (12%)
Query: 6 PHYLQS-FELGGEIARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAGEWTAS 64
P Y ++ +LG E+ + G GLM V++ G+ V G
Sbjct: 23 PSYQEAAIQLGNELVERRIDLVYGGGSVGLMGLVSQAVHHGGRHVLGVI----------- 71
Query: 65 NFHPYLPLETYLTCRFFSARKHGLIDCAVRNDSCDRTA--VVALPGGVGTLDEMFEILAL 122
P + +T K + D R R A +ALPGG GTL+E+ E++
Sbjct: 72 ---PKTLMPREITGETIGEVK-AVADMHQRKAEMARQADAFIALPGGYGTLEELLEVITW 127
Query: 123 IQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSY 182
QL G P ++N D +Y LL F+ D G ++ +A + N++ L
Sbjct: 128 AQL---GIHRK-PVGLLNVDGYYNSLLTFIDKAVDEGFISP--MARRIIVSAPNAKELVR 181
Query: 183 LAEFYD 188
E Y+
Sbjct: 182 QLEEYE 187
>sp|Q8H7U8|LOGL3_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL3 OS=Oryza sativa subsp. japonica GN=LOGL3 PE=2 SV=1
Length = 211
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 18/145 (12%)
Query: 18 IARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAGEWTASNFHPYLPLETYLT 77
+AR +D + G GLM V++ G+ V G + P + ET
Sbjct: 42 VARGIDLV-YGGGSIGLMGLVSQAVYDGGRHV--------IGVIPKTLMTPEIIGETVGE 92
Query: 78 CRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFL 137
R S + A ++D A +ALPGG GTL+E+ E++ QL P
Sbjct: 93 VRPVSDMHQRKAEMARQSD-----AFIALPGGYGTLEELLEVITWAQL----GIHHKPVG 143
Query: 138 VMNYDSFYKKLLDFLGDCEDWGTVA 162
++N D +Y LL F+ + G ++
Sbjct: 144 LLNVDGYYNSLLTFIDQAVEEGFIS 168
>sp|Q0JBP5|LOGL6_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL6 OS=Oryza sativa subsp. japonica GN=LOGL6 PE=2 SV=1
Length = 250
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 21/144 (14%)
Query: 11 SFELGGE-IARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAGEWTASNFHPY 69
+ ELG E +AR +D + G GLM V++ G+ V G P
Sbjct: 48 AVELGKELVARNIDLV-YGGGSVGLMGLVSQAVYNGGRHVIGV---------IPKTLMPR 97
Query: 70 -LPLETYLTCRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERI 128
+ ET + + + A ++D A +ALPGG GTL+E+ E++A QL
Sbjct: 98 EITGETVGEVKAVADMHQRKAEMARQSD-----AFIALPGGYGTLEELLEVIAWAQLGI- 151
Query: 129 GSELPVPFLVMNYDSFYKKLLDFL 152
+ PV L N D +Y LL F+
Sbjct: 152 -HDKPVGLL--NVDGYYNSLLSFI 172
>sp|B7E7M8|LOGL9_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL9 OS=Oryza sativa subsp. japonica GN=LOGL9 PE=2 SV=1
Length = 227
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 11 SFELGGE-IARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAGEWTASNFHPY 69
+ ELG E +AR +D + G GLM V + G V G G+
Sbjct: 67 AVELGKELVARKVDLV-YGGGSLGLMGEVAEAVRNGGGHVIGVIPTTLMGKEVTG----- 120
Query: 70 LPLETYLTCRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIG 129
ET R + + A R+D A VALPGG GTL+E+ E++A QL
Sbjct: 121 ---ETVGEVREVGSMHERKAEMARRSD-----AFVALPGGYGTLEEVVEVIAWAQLGIHA 172
Query: 130 SELPVPFLVMNYDSFYKKLLDFL 152
P ++N D +Y LL F+
Sbjct: 173 K----PVGLLNVDGYYDFLLAFV 191
>sp|P47044|YJF5_YEAST LOG family protein YJL055W OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YJL055W PE=1 SV=1
Length = 245
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 102 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFL 152
A VA+PGG GT +E+ E + QL P ++ N D FY KLL+FL
Sbjct: 143 AFVAMPGGYGTFEEIMECITWSQLGIHNK----PIILFNIDGFYDKLLEFL 189
>sp|Q8L8B8|LOG3_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3
OS=Arabidopsis thaliana GN=LOG3 PE=1 SV=1
Length = 215
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 11 SFELGGE-IARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAGEWTASNFHPY 69
+ +LG E ++R +D + G GLM V++ G+ V G P
Sbjct: 34 AVDLGNELVSRNIDLV-YGGGSIGLMGLVSQAVHDGGRHVIGI---------IPKTLMPR 83
Query: 70 -LPLETYLTCRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERI 128
L ET R + + A +D A +ALPGG GTL+E+ E++ QL
Sbjct: 84 ELTGETVGEVRAVADMHQRKAEMAKHSD-----AFIALPGGYGTLEELLEVITWAQL--- 135
Query: 129 GSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVA 162
P ++N D +Y LL F+ + G ++
Sbjct: 136 -GIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFIS 168
>sp|Q5BPS0|LOG2_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2
OS=Arabidopsis thaliana GN=LOG2 PE=1 SV=1
Length = 213
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 102 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 161
A +ALPGG GT +E+ E++ QL I ++ P ++N D FY LL F+ D G V
Sbjct: 107 AFIALPGGYGTFEELLEVITWSQLG-IHTK---PVGLLNVDGFYDSLLTFIDKAVDEGFV 162
Query: 162 AKDEVASLWKICDSNSEALSYLAEFY 187
+ A + N+ L L E Y
Sbjct: 163 SS--TARRIIVSAPNAPQLLQLLEEY 186
>sp|Q84M85|LOGL5_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL5 OS=Oryza sativa subsp. japonica GN=LOGL5 PE=2 SV=1
Length = 246
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 102 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 161
A +ALPGG GTL+E+ E++ QL RI + P ++N D +Y LL F+ G V
Sbjct: 131 AFIALPGGYGTLEELLEVITWAQL-RIHHK---PVGLLNVDGYYDSLLAFIDKAVHEGFV 186
Query: 162 A 162
+
Sbjct: 187 S 187
>sp|Q9LFH3|LOG4_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4
OS=Arabidopsis thaliana GN=LOG4 PE=1 SV=1
Length = 215
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 21/156 (13%)
Query: 11 SFELGGEIA-RLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAGEWTASNFHPY 69
+ +LG E+ R +D + G GLM V++ G+ V G P
Sbjct: 34 AVDLGNELVLRNIDLV-YGGGSIGLMGLVSQAVHDGGRHVIGV---------IPKTLMPR 83
Query: 70 -LPLETYLTCRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERI 128
L ET R + + A +D A +ALPGG GTL+E+ E++ QL
Sbjct: 84 ELTGETVGEVRAVADMHQRKAEMARHSD-----AFIALPGGYGTLEELLEVITWAQL--- 135
Query: 129 GSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKD 164
P ++N D +Y LL F+ + G ++ +
Sbjct: 136 -GIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISTN 170
>sp|Q5ZC82|LOG_ORYSJ Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG
OS=Oryza sativa subsp. japonica GN=LOG PE=1 SV=1
Length = 242
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 102 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 161
A +ALPGG GTL+E+ E++ QL P ++N D FY L F+ G +
Sbjct: 134 AFIALPGGYGTLEELLEVITWAQL----GIHKKPVGLLNVDGFYDPFLSFIDMAVSEGFI 189
Query: 162 AKD 164
A+D
Sbjct: 190 AED 192
>sp|Q851C7|LOGL4_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOG4 OS=Oryza sativa subsp. japonica GN=LOGL4 PE=3 SV=1
Length = 230
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 102 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 161
A +ALPGG GT++E+ EI+A QL P ++N D +Y LL + G +
Sbjct: 119 AFIALPGGYGTIEELLEIIAWAQLGIHNK----PVGLLNVDGYYNNLLSLFDKGVEEGFI 174
Query: 162 AKDEVA-SLWKICDSNSEALSYLAE 185
D A +++ + D+ E L+ L E
Sbjct: 175 --DAAARNIFVLADNAGELLTKLTE 197
>sp|Q0DFG8|LOGL8_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL8 OS=Oryza sativa subsp. japonica GN=LOGL8 PE=2 SV=3
Length = 266
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 102 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 161
A +ALPGG GTL+E+ E++ QL P ++N D FY LL F+ + G +
Sbjct: 156 AFIALPGGYGTLEELLEVITWAQL----GIHKKPVGLLNVDGFYNPLLSFIDLAVNEGFI 211
Query: 162 AKD 164
++
Sbjct: 212 TEE 214
>sp|Q8LBB7|LOG5_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5
OS=Arabidopsis thaliana GN=LOG5 PE=1 SV=1
Length = 228
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 104 VALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 161
+ALPGG GTL+E+ E++A QL + PV L N D +Y LL F+ D G +
Sbjct: 109 IALPGGYGTLEELLEVIAWAQLGI--HDKPVGLL--NVDGYYNYLLTFIDKAVDDGFI 162
>sp|Q8RUN2|LOG1_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1
OS=Arabidopsis thaliana GN=LOG1 PE=1 SV=1
Length = 213
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 11 SFELGGE-IARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAGEWTASNFHPY 69
+ ELG E ++R +D + G GLM +++ G+ V G P
Sbjct: 28 AIELGTELVSRNIDLV-YGGGSIGLMGLISQAVFNGGRHVIGV---------IPKTLMPR 77
Query: 70 -LPLETYLTCRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERI 128
+ ET + + + A +D A +ALPGG GTL+E+ E++ QL
Sbjct: 78 EITGETVGEVKAVADMHQRKAEMAKHSD-----AFIALPGGYGTLEELLEVITWAQLGI- 131
Query: 129 GSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVA 162
+ PV L N + +Y LL F+ + G ++
Sbjct: 132 -HDKPVGLL--NVEGYYNSLLSFIDKAVEEGFIS 162
>sp|P48636|Y4923_PSEAE LOG family protein PA4923 OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA4923 PE=3
SV=2
Length = 195
Score = 38.1 bits (87), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 102 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCED 157
A +ALPGG+GTL+E+FE+ QL P ++ + FY LL FL D
Sbjct: 102 AFIALPGGLGTLEELFEVWTWGQLGYHAK----PLGLLEVNGFYDPLLTFLDHLVD 153
>sp|Q5TKP8|LOGL7_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL7 OS=Oryza sativa subsp. japonica GN=LOGL7 PE=2 SV=1
Length = 223
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 73/180 (40%), Gaps = 20/180 (11%)
Query: 11 SFELGGEIARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGG-FKVGKEAGEWTASNFHPY 69
+ +LG E+ R + G GLM + + + G+ V G A E + +
Sbjct: 37 ALDLGHELVRRGVDLVYGGGSIGLMGLIARTVLDGGRRVVGVIPRALMAVEISGESVGEV 96
Query: 70 LPLETYLTCRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIG 129
+ ++ + AR+ A +ALPGG GT++E+ E++ QL
Sbjct: 97 IVVQDMHERKAEMARRS--------------KAFIALPGGYGTMEELLEMITWCQLGI-- 140
Query: 130 SELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDL 189
+ PV L N D +Y LL E G + D ++ + SE L+ + ++ L
Sbjct: 141 HDKPVGLL--NVDGYYDPLLALFDKGEAEGFINSD-CRQIFVSAPTASELLTKMEQYTRL 197
>sp|Q9LYV8|LOG6_ARATH Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOG6 OS=Arabidopsis thaliana GN=LOG6 PE=3 SV=2
Length = 201
Score = 35.4 bits (80), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 102 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 161
A + LPGG GTL+E+ E++ QL + PV L N D +Y LL F+ + G +
Sbjct: 117 AFITLPGGYGTLEELLEVITWAQLGI--HDKPVGLL--NVDGYYDALLLFIDKAVEEGFI 172
>sp|P0ADS1|YGDH_SHIFL LOG family protein YgdH OS=Shigella flexneri GN=ygdH PE=3 SV=1
Length = 454
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 8 YLQSFELGGEIARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAG--EWTASN 65
YL + +G ++ L + +G GPG M+A KGA G +K + G E +
Sbjct: 164 YLYARRVGNQLG-LRELNICTGCGPGAMEAPMKGA-AVGHAQQRYKDSRFIGMTEPSIIA 221
Query: 66 FHPYLPLETYLTCRFFSARKHGLIDCAVRNDSCDRTA--VVALPGGVGTLDEMFEILALI 123
P PL L + D R ++ R A ++ PGGVGT +E+ +L ++
Sbjct: 222 AEPPNPLVNELII---------MPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGIL 272
>sp|P0ADR8|YGDH_ECOLI LOG family protein YgdH OS=Escherichia coli (strain K12) GN=ygdH
PE=1 SV=1
Length = 454
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 8 YLQSFELGGEIARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAG--EWTASN 65
YL + +G ++ L + +G GPG M+A KGA G +K + G E +
Sbjct: 164 YLYARRVGNQLG-LRELNICTGCGPGAMEAPMKGA-AVGHAQQRYKDSRFIGMTEPSIIA 221
Query: 66 FHPYLPLETYLTCRFFSARKHGLIDCAVRNDSCDRTA--VVALPGGVGTLDEMFEILALI 123
P PL L + D R ++ R A ++ PGGVGT +E+ +L ++
Sbjct: 222 AEPPNPLVNELII---------MPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGIL 272
>sp|P0ADR9|YGDH_ECOL6 LOG family protein YgdH OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=ygdH PE=3 SV=1
Length = 454
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 8 YLQSFELGGEIARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAG--EWTASN 65
YL + +G ++ L + +G GPG M+A KGA G +K + G E +
Sbjct: 164 YLYARRVGNQLG-LRELNICTGCGPGAMEAPMKGA-AVGHAQQRYKDSRFIGMTEPSIIA 221
Query: 66 FHPYLPLETYLTCRFFSARKHGLIDCAVRNDSCDRTA--VVALPGGVGTLDEMFEILALI 123
P PL L + D R ++ R A ++ PGGVGT +E+ +L ++
Sbjct: 222 AEPPNPLVNELII---------MPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGIL 272
>sp|P0ADS0|YGDH_ECO57 LOG family protein YgdH OS=Escherichia coli O157:H7 GN=ygdH PE=3
SV=1
Length = 454
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 8 YLQSFELGGEIARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAG--EWTASN 65
YL + +G ++ L + +G GPG M+A KGA G +K + G E +
Sbjct: 164 YLYARRVGNQLG-LRELNICTGCGPGAMEAPMKGA-AVGHAQQRYKDSRFIGMTEPSIIA 221
Query: 66 FHPYLPLETYLTCRFFSARKHGLIDCAVRNDSCDRTA--VVALPGGVGTLDEMFEILALI 123
P PL L + D R ++ R A ++ PGGVGT +E+ +L ++
Sbjct: 222 AEPPNPLVNELII---------MPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGIL 272
>sp|Q1ILN0|MUTL_KORVE DNA mismatch repair protein MutL OS=Koribacter versatilis (strain
Ellin345) GN=mutL PE=3 SV=1
Length = 647
Score = 33.9 bits (76), Expect = 0.89, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 109 GVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTVAKDEVAS 168
G TLD++ + A I+LERIG P P+L N D ++ ++ G+ G ++K E+
Sbjct: 214 GNETLDQLIPLAAQIKLERIGLPKPPPWLRKNEDDEEEQTVE-PGEVRLHGFISKPEIQK 272
Query: 169 L 169
L
Sbjct: 273 L 273
>sp|Q8LR50|LOGL1_ORYSJ Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase
LOGL1 OS=Oryza sativa subsp. japonica GN=LOGL1 PE=2 SV=1
Length = 223
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 102 AVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDCEDWGTV 161
A +ALPGG GT++E+ E++ QL + PV L N D +Y LL G +
Sbjct: 117 AFIALPGGYGTMEELLEMITWSQLGI--HDKPVGLL--NVDGYYDPLLALFDKGAAEGFI 172
Query: 162 AKD 164
D
Sbjct: 173 KAD 175
>sp|Q84MC2|LOG8_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8
OS=Arabidopsis thaliana GN=LOG8 PE=1 SV=1
Length = 216
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 41/151 (27%)
Query: 11 SFELGGEIARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAGEWTASNFHPYL 70
+ ELG E+ + + G GLM +++ + G V G + K +
Sbjct: 30 AIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGLHVLGI-IPK-----------ALM 77
Query: 71 PLETYLTCRFFSARKHGLIDCAVRNDSCDRTAV--------VALPGGVGTLDEMFEILAL 122
P+E S G D V D +R A +ALPGG GT++E+ E++
Sbjct: 78 PIE-------ISGETVG--DVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITW 128
Query: 123 IQL----ERIGSELPVPFLVMNYDSFYKKLL 149
QL + +G ++N D +Y LL
Sbjct: 129 SQLGIHKKTVG--------LLNVDGYYNNLL 151
>sp|O06986|YVDD_BACSU LOG family protein YvdD OS=Bacillus subtilis (strain 168) GN=yvdD
PE=1 SV=1
Length = 191
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 15/125 (12%)
Query: 2 GPDHPHYLQSFELGGEIARLLDCTTWSGAGPGLMDAVTKGAMQ-AGKPVGGFKVGKEAGE 60
G + + ++ ELG +A + G+ GLM + M+ G +G G +GE
Sbjct: 13 GGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGGTAIGVMPSGLFSGE 72
Query: 61 WTASNFHPYLPLETYLTCRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEIL 120
N L + RK + + A +++PGG GT +E+FE+L
Sbjct: 73 VVHQN------LTELIEVNGMHERKAKMSELA--------DGFISMPGGFGTYEELFEVL 118
Query: 121 ALIQL 125
Q+
Sbjct: 119 CWAQI 123
>sp|Q1WSN8|KUP_LACS1 Probable potassium transport system protein kup OS=Lactobacillus
salivarius (strain UCC118) GN=kup PE=3 SV=1
Length = 674
Score = 30.8 bits (68), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 144 FYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHEVNLKS 203
F KL D+L D E+W ++ +D L ++ + + L Y++ L+ +DKR ++V ++
Sbjct: 445 FGNKLRDYLSDEEEWVSL-RDYKDVLQELSNDDRIPL-YISNLVMLTKVDKRTYKVKRET 502
Query: 204 THGIV 208
+ I+
Sbjct: 503 LYSIL 507
>sp|P15706|GP63_LEICH Leishmanolysin OS=Leishmania chagasi GN=gp63 PE=2 SV=1
Length = 599
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 44/118 (37%), Gaps = 26/118 (22%)
Query: 3 PDHPHYLQSF---ELGGEIARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAG 59
PD P Y Q F L G A + C G G + + A +AG P GF V +A
Sbjct: 428 PDLPPYWQYFTDPSLAGISAFMDCCPVVEPYGDG---SCAQRASEAGAPFKGFNVFSDAA 484
Query: 60 EWTASNFHPYLPLETYLTCRFFSARKHGLID-----CA-VRNDSCDRTAVVALPGGVG 111
F P HG+I CA VR D+ RT V + GG G
Sbjct: 485 RCIDGAFRPKT--------------SHGIIKSYAGLCANVRCDTATRTYSVQVHGGSG 528
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,902,398
Number of Sequences: 539616
Number of extensions: 3348710
Number of successful extensions: 7526
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 7487
Number of HSP's gapped (non-prelim): 38
length of query: 209
length of database: 191,569,459
effective HSP length: 112
effective length of query: 97
effective length of database: 131,132,467
effective search space: 12719849299
effective search space used: 12719849299
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)