Query 028418
Match_columns 209
No_of_seqs 193 out of 1162
Neff 4.9
Searched_HMMs 46136
Date Fri Mar 29 11:13:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028418.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028418hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1502 Flavonol reductase/cin 99.8 2.1E-20 4.6E-25 170.1 11.7 102 98-199 5-136 (327)
2 CHL00194 ycf39 Ycf39; Provisio 99.8 3E-20 6.4E-25 163.7 12.3 97 100-196 1-114 (317)
3 PF13460 NAD_binding_10: NADH( 99.8 1.5E-19 3.2E-24 145.5 13.4 99 102-202 1-108 (183)
4 PF01073 3Beta_HSD: 3-beta hyd 99.8 5.6E-20 1.2E-24 162.1 10.3 96 103-198 1-122 (280)
5 TIGR03649 ergot_EASG ergot alk 99.8 9.2E-19 2E-23 150.7 10.8 96 101-199 1-112 (285)
6 PRK15181 Vi polysaccharide bio 99.8 1.9E-18 4.1E-23 154.3 12.6 104 97-200 13-149 (348)
7 PLN02427 UDP-apiose/xylose syn 99.8 2E-18 4.4E-23 155.6 12.3 99 100-199 15-143 (386)
8 PLN02214 cinnamoyl-CoA reducta 99.8 3.2E-18 7E-23 152.9 13.2 106 94-199 5-135 (342)
9 PLN02662 cinnamyl-alcohol dehy 99.7 1.6E-17 3.4E-22 144.2 11.5 98 98-195 3-130 (322)
10 PLN00141 Tic62-NAD(P)-related 99.7 3.5E-17 7.7E-22 139.3 13.3 105 95-199 13-139 (251)
11 PRK11908 NAD-dependent epimera 99.7 2.2E-17 4.7E-22 146.5 12.2 101 99-200 1-126 (347)
12 PLN02695 GDP-D-mannose-3',5'-e 99.7 3.1E-17 6.8E-22 148.6 13.2 109 90-199 13-144 (370)
13 PLN02650 dihydroflavonol-4-red 99.7 2.4E-17 5.1E-22 146.4 11.2 101 98-198 4-134 (351)
14 PLN02986 cinnamyl-alcohol dehy 99.7 3.3E-17 7.1E-22 143.4 11.9 99 98-196 4-132 (322)
15 TIGR01472 gmd GDP-mannose 4,6- 99.7 4E-17 8.6E-22 144.5 11.8 101 100-200 1-140 (343)
16 TIGR03466 HpnA hopanoid-associ 99.7 5.5E-17 1.2E-21 140.0 12.1 99 100-198 1-119 (328)
17 COG1087 GalE UDP-glucose 4-epi 99.7 4.8E-17 1E-21 147.2 11.6 103 100-202 1-128 (329)
18 PLN00198 anthocyanidin reducta 99.7 6.9E-17 1.5E-21 142.5 12.1 102 97-198 7-137 (338)
19 PF05368 NmrA: NmrA-like famil 99.7 5.1E-17 1.1E-21 136.4 10.4 96 102-197 1-108 (233)
20 COG0451 WcaG Nucleoside-diphos 99.7 8.6E-17 1.9E-21 137.6 11.7 98 101-199 2-123 (314)
21 PLN02896 cinnamyl-alcohol dehy 99.7 1.5E-16 3.3E-21 141.6 12.7 104 96-199 7-145 (353)
22 PRK08125 bifunctional UDP-gluc 99.7 1.5E-16 3.3E-21 154.4 12.3 104 95-199 311-439 (660)
23 PLN02583 cinnamoyl-CoA reducta 99.7 3.4E-16 7.4E-21 137.0 12.5 100 98-197 5-133 (297)
24 PLN02572 UDP-sulfoquinovose sy 99.7 3.5E-16 7.5E-21 145.9 12.6 104 96-199 44-198 (442)
25 PLN02686 cinnamoyl-CoA reducta 99.7 2.2E-16 4.7E-21 143.0 10.7 104 95-198 49-188 (367)
26 PLN02657 3,8-divinyl protochlo 99.7 5.3E-16 1.1E-20 142.3 12.4 103 96-198 57-188 (390)
27 PF01370 Epimerase: NAD depend 99.7 3.9E-16 8.5E-21 128.5 9.5 98 102-199 1-123 (236)
28 PLN02989 cinnamyl-alcohol dehy 99.7 1.3E-15 2.9E-20 133.1 12.6 100 99-198 5-135 (325)
29 PRK10675 UDP-galactose-4-epime 99.6 1.7E-15 3.7E-20 132.6 12.4 100 100-199 1-131 (338)
30 PLN00016 RNA-binding protein; 99.6 5E-16 1.1E-20 140.3 9.2 102 98-200 51-173 (378)
31 PRK09987 dTDP-4-dehydrorhamnos 99.6 1.1E-15 2.3E-20 134.2 10.4 88 100-200 1-112 (299)
32 PLN02653 GDP-mannose 4,6-dehyd 99.6 1.7E-15 3.7E-20 133.7 11.5 103 98-200 5-147 (340)
33 PRK10217 dTDP-glucose 4,6-dehy 99.6 3.2E-15 6.9E-20 132.3 12.2 101 99-199 1-141 (355)
34 TIGR02622 CDP_4_6_dhtase CDP-g 99.6 3.4E-15 7.5E-20 132.7 12.0 101 99-199 4-134 (349)
35 PLN02240 UDP-glucose 4-epimera 99.6 4.8E-15 1E-19 130.5 12.4 101 99-199 5-139 (352)
36 COG0702 Predicted nucleoside-d 99.6 4.1E-15 8.9E-20 125.0 10.9 99 100-199 1-114 (275)
37 PLN02206 UDP-glucuronate decar 99.6 4.9E-15 1.1E-19 138.6 11.7 96 98-199 118-240 (442)
38 PRK07201 short chain dehydroge 99.6 5.9E-15 1.3E-19 140.6 11.5 99 100-199 1-132 (657)
39 TIGR03589 PseB UDP-N-acetylglu 99.6 1.1E-14 2.3E-19 129.4 12.3 98 99-196 4-129 (324)
40 PLN02166 dTDP-glucose 4,6-dehy 99.6 5.4E-15 1.2E-19 138.1 10.9 97 98-200 119-242 (436)
41 PLN02260 probable rhamnose bio 99.6 9.1E-15 2E-19 141.4 12.7 102 99-200 6-140 (668)
42 PLN03209 translocon at the inn 99.6 1.4E-14 3E-19 140.4 11.7 98 99-196 80-212 (576)
43 TIGR01746 Thioester-redct thio 99.6 1.5E-14 3.3E-19 125.4 10.7 99 101-199 1-143 (367)
44 TIGR01181 dTDP_gluc_dehyt dTDP 99.6 2.2E-14 4.8E-19 122.6 11.2 100 101-200 1-133 (317)
45 KOG1430 C-3 sterol dehydrogena 99.6 2.4E-14 5.2E-19 132.2 10.9 103 97-200 2-134 (361)
46 PRK11150 rfaD ADP-L-glycero-D- 99.6 1.2E-14 2.5E-19 126.3 8.3 94 101-199 1-123 (308)
47 PRK10084 dTDP-glucose 4,6 dehy 99.5 5E-14 1.1E-18 124.5 11.1 99 100-198 1-139 (352)
48 KOG1371 UDP-glucose 4-epimeras 99.5 3.6E-14 7.7E-19 129.5 10.2 103 100-202 3-138 (343)
49 TIGR01214 rmlD dTDP-4-dehydror 99.5 4.7E-14 1E-18 120.7 10.0 83 101-199 1-107 (287)
50 PLN02996 fatty acyl-CoA reduct 99.5 6.8E-14 1.5E-18 132.5 11.7 104 97-200 9-169 (491)
51 TIGR01179 galE UDP-glucose-4-e 99.5 1.2E-13 2.5E-18 118.5 11.9 100 101-200 1-129 (328)
52 PRK12320 hypothetical protein; 99.5 1E-13 2.2E-18 137.0 12.4 89 100-193 1-103 (699)
53 PLN02725 GDP-4-keto-6-deoxyman 99.5 5.4E-14 1.2E-18 120.8 8.9 83 103-199 1-108 (306)
54 PRK09291 short chain dehydroge 99.5 3.1E-13 6.7E-18 113.4 12.1 99 99-197 2-137 (257)
55 TIGR02197 heptose_epim ADP-L-g 99.5 1.4E-13 3.1E-18 118.6 9.9 96 102-199 1-121 (314)
56 PRK05865 hypothetical protein; 99.5 1.9E-13 4.1E-18 137.6 12.0 92 100-194 1-105 (854)
57 PF07993 NAD_binding_4: Male s 99.5 1.3E-13 2.9E-18 118.1 9.1 97 104-200 1-143 (249)
58 PRK12429 3-hydroxybutyrate deh 99.5 4.7E-13 1E-17 111.8 12.0 100 99-198 4-146 (258)
59 PRK06179 short chain dehydroge 99.5 3.9E-13 8.4E-18 114.3 11.2 99 99-199 4-139 (270)
60 PRK06182 short chain dehydroge 99.5 4.3E-13 9.3E-18 114.7 11.5 98 99-196 3-137 (273)
61 PRK13394 3-hydroxybutyrate deh 99.5 7.1E-13 1.5E-17 111.2 11.9 102 97-198 5-150 (262)
62 TIGR01963 PHB_DH 3-hydroxybuty 99.5 6.6E-13 1.4E-17 110.7 11.2 99 100-198 2-143 (255)
63 PRK06482 short chain dehydroge 99.5 5.5E-13 1.2E-17 113.9 10.9 97 100-196 3-139 (276)
64 TIGR01777 yfcH conserved hypot 99.4 3.1E-13 6.8E-18 114.8 9.0 93 102-199 1-119 (292)
65 PRK12828 short chain dehydroge 99.4 1.1E-12 2.4E-17 107.8 11.7 103 98-200 6-149 (239)
66 PRK06180 short chain dehydroge 99.4 9.7E-13 2.1E-17 113.1 11.6 101 99-199 4-144 (277)
67 PRK12825 fabG 3-ketoacyl-(acyl 99.4 1.4E-12 3.1E-17 107.3 12.0 103 97-199 4-150 (249)
68 PRK07231 fabG 3-ketoacyl-(acyl 99.4 1E-12 2.3E-17 109.3 10.6 103 98-200 4-149 (251)
69 PLN02503 fatty acyl-CoA reduct 99.4 1E-12 2.3E-17 128.1 11.6 103 98-200 118-276 (605)
70 PRK06194 hypothetical protein; 99.4 2.7E-12 5.9E-17 110.0 12.6 73 98-170 5-90 (287)
71 PRK05993 short chain dehydroge 99.4 2.3E-12 5E-17 111.0 11.5 99 99-197 4-140 (277)
72 PRK06138 short chain dehydroge 99.4 3.4E-12 7.4E-17 106.5 11.8 99 98-196 4-144 (252)
73 PRK05653 fabG 3-ketoacyl-(acyl 99.4 4E-12 8.8E-17 104.7 11.5 99 98-196 4-145 (246)
74 PRK08264 short chain dehydroge 99.4 5.9E-12 1.3E-16 104.7 12.6 101 98-199 5-140 (238)
75 PRK08219 short chain dehydroge 99.4 2.4E-12 5.2E-17 105.6 10.2 100 99-200 3-137 (227)
76 PLN02778 3,5-epimerase/4-reduc 99.4 2.4E-12 5.1E-17 113.7 10.4 84 96-198 6-116 (298)
77 PRK12826 3-ketoacyl-(acyl-carr 99.4 5.2E-12 1.1E-16 104.9 11.9 99 98-196 5-146 (251)
78 PF02719 Polysacc_synt_2: Poly 99.4 1.8E-12 4E-17 116.9 9.6 98 102-199 1-135 (293)
79 TIGR03206 benzo_BadH 2-hydroxy 99.4 3.5E-12 7.5E-17 106.4 10.6 103 98-200 2-147 (250)
80 PRK09186 flagellin modificatio 99.4 4.6E-12 9.9E-17 106.2 11.2 99 98-196 3-149 (256)
81 PRK10538 malonic semialdehyde 99.4 6.8E-12 1.5E-16 105.9 12.2 98 100-197 1-139 (248)
82 PRK07666 fabG 3-ketoacyl-(acyl 99.4 7.2E-12 1.6E-16 104.5 12.2 101 98-198 6-149 (239)
83 PRK08263 short chain dehydroge 99.4 6.6E-12 1.4E-16 107.7 12.1 102 99-200 3-144 (275)
84 PRK07454 short chain dehydroge 99.4 6.4E-12 1.4E-16 104.9 11.5 103 98-200 5-150 (241)
85 PRK07577 short chain dehydroge 99.4 9.1E-12 2E-16 103.1 12.2 96 99-199 3-134 (234)
86 PRK07326 short chain dehydroge 99.4 7.2E-12 1.6E-16 103.9 11.5 100 98-197 5-145 (237)
87 PRK07775 short chain dehydroge 99.4 7.6E-12 1.7E-16 107.6 12.0 106 95-200 6-154 (274)
88 PRK05557 fabG 3-ketoacyl-(acyl 99.4 1.2E-11 2.6E-16 102.0 12.7 98 98-195 4-145 (248)
89 PRK07806 short chain dehydroge 99.3 1.2E-11 2.7E-16 103.4 12.2 98 98-195 5-138 (248)
90 PRK07023 short chain dehydroge 99.3 9.5E-12 2.1E-16 104.2 11.2 101 99-199 1-144 (243)
91 PRK06197 short chain dehydroge 99.3 8.2E-12 1.8E-16 109.0 11.1 102 95-196 12-156 (306)
92 PRK08267 short chain dehydroge 99.3 8.6E-12 1.9E-16 105.5 10.9 97 99-195 1-139 (260)
93 PRK08063 enoyl-(acyl carrier p 99.3 1.3E-11 2.7E-16 103.2 11.6 100 99-198 4-147 (250)
94 PRK12746 short chain dehydroge 99.3 1.4E-11 3.1E-16 103.4 11.7 101 98-198 5-153 (254)
95 PRK08213 gluconate 5-dehydroge 99.3 1.4E-11 3E-16 104.2 11.5 102 97-198 10-155 (259)
96 PRK07825 short chain dehydroge 99.3 8.5E-12 1.8E-16 106.4 10.3 101 99-199 5-144 (273)
97 PRK12827 short chain dehydroge 99.3 3E-11 6.5E-16 100.2 13.2 101 98-198 5-153 (249)
98 PRK07774 short chain dehydroge 99.3 1.7E-11 3.6E-16 102.5 11.4 102 98-199 5-152 (250)
99 PRK05565 fabG 3-ketoacyl-(acyl 99.3 1.4E-11 3.1E-16 102.0 10.8 100 98-197 4-147 (247)
100 COG2910 Putative NADH-flavin r 99.3 1E-11 2.3E-16 106.4 10.2 93 100-194 1-107 (211)
101 PRK06914 short chain dehydroge 99.3 1.3E-11 2.8E-16 105.5 10.5 98 99-196 3-144 (280)
102 PRK07102 short chain dehydroge 99.3 1.8E-11 4E-16 102.5 11.1 98 99-196 1-139 (243)
103 PRK08251 short chain dehydroge 99.3 2.7E-11 5.8E-16 101.3 12.0 98 99-196 2-144 (248)
104 PRK08017 oxidoreductase; Provi 99.3 1.7E-11 3.7E-16 102.7 10.6 98 100-197 3-138 (256)
105 KOG1429 dTDP-glucose 4-6-dehyd 99.3 5.7E-12 1.2E-16 114.1 8.0 103 91-200 20-149 (350)
106 PRK07024 short chain dehydroge 99.3 1.9E-11 4.2E-16 103.6 10.8 98 99-196 2-142 (257)
107 PRK06398 aldose dehydrogenase; 99.3 4.5E-11 9.8E-16 102.0 13.1 98 97-199 4-138 (258)
108 PRK05650 short chain dehydroge 99.3 3.1E-11 6.8E-16 103.0 11.9 101 100-200 1-144 (270)
109 PRK12936 3-ketoacyl-(acyl-carr 99.3 4.6E-11 1E-15 99.1 12.6 100 97-196 4-143 (245)
110 PLN02260 probable rhamnose bio 99.3 2.5E-11 5.4E-16 117.6 12.6 84 96-198 377-487 (668)
111 PRK12829 short chain dehydroge 99.3 2.4E-11 5.1E-16 102.1 10.8 75 96-170 8-93 (264)
112 PRK07523 gluconate 5-dehydroge 99.3 3.3E-11 7.2E-16 101.6 11.7 101 97-197 8-151 (255)
113 COG1086 Predicted nucleoside-d 99.3 1.6E-11 3.5E-16 118.7 11.0 103 95-197 246-381 (588)
114 PRK07814 short chain dehydroge 99.3 4.1E-11 8.9E-16 102.1 12.2 100 97-196 8-151 (263)
115 PRK06196 oxidoreductase; Provi 99.3 2E-11 4.2E-16 107.5 10.5 98 98-195 25-159 (315)
116 PRK05866 short chain dehydroge 99.3 3.8E-11 8.3E-16 105.3 12.1 101 97-197 38-183 (293)
117 PRK07074 short chain dehydroge 99.3 3.2E-11 6.9E-16 101.7 10.8 97 99-195 2-139 (257)
118 PRK12823 benD 1,6-dihydroxycyc 99.3 4.1E-11 8.8E-16 101.2 11.4 100 98-197 7-149 (260)
119 PRK12939 short chain dehydroge 99.3 8E-11 1.7E-15 97.9 12.6 101 98-198 6-149 (250)
120 COG1088 RfbB dTDP-D-glucose 4, 99.3 2.8E-11 6E-16 110.0 10.5 102 100-201 1-135 (340)
121 PRK05693 short chain dehydroge 99.3 5.8E-11 1.3E-15 101.6 11.8 72 99-170 1-79 (274)
122 PRK07856 short chain dehydroge 99.3 6.3E-11 1.4E-15 100.0 11.7 71 98-170 5-82 (252)
123 COG3320 Putative dehydrogenase 99.3 3.9E-11 8.4E-16 111.4 11.2 100 100-199 1-142 (382)
124 TIGR01829 AcAcCoA_reduct aceto 99.3 6E-11 1.3E-15 98.2 11.3 97 100-196 1-141 (242)
125 PRK07890 short chain dehydroge 99.3 4.8E-11 1E-15 100.2 10.8 73 98-170 4-89 (258)
126 PRK07060 short chain dehydroge 99.3 4.3E-11 9.2E-16 99.5 10.3 73 98-170 8-84 (245)
127 PRK06181 short chain dehydroge 99.3 7.3E-11 1.6E-15 99.8 11.9 101 99-199 1-144 (263)
128 PRK05875 short chain dehydroge 99.3 7.2E-11 1.6E-15 100.7 11.9 102 98-199 6-153 (276)
129 PRK07063 short chain dehydroge 99.3 8.6E-11 1.9E-15 99.4 12.3 103 97-199 5-152 (260)
130 PRK12824 acetoacetyl-CoA reduc 99.2 8.8E-11 1.9E-15 97.4 11.8 100 100-199 3-146 (245)
131 PRK08220 2,3-dihydroxybenzoate 99.2 1.2E-10 2.6E-15 97.4 12.3 98 97-197 6-140 (252)
132 TIGR03443 alpha_am_amid L-amin 99.2 4.5E-11 9.8E-16 123.0 11.8 100 99-198 971-1115(1389)
133 PRK07069 short chain dehydroge 99.2 9.5E-11 2.1E-15 97.8 11.5 100 101-200 1-146 (251)
134 KOG1203 Predicted dehydrogenas 99.2 4.8E-11 1E-15 112.0 10.5 102 95-196 75-205 (411)
135 PRK07453 protochlorophyllide o 99.2 5.8E-11 1.3E-15 104.6 10.5 73 98-170 5-90 (322)
136 PRK06841 short chain dehydroge 99.2 1.5E-10 3.2E-15 97.3 12.3 99 97-195 13-151 (255)
137 PRK08339 short chain dehydroge 99.2 1.2E-10 2.6E-15 100.1 11.9 103 98-200 7-152 (263)
138 PRK12745 3-ketoacyl-(acyl-carr 99.2 1.8E-10 3.8E-15 96.6 12.3 72 99-170 2-87 (256)
139 PRK07109 short chain dehydroge 99.2 1.2E-10 2.7E-15 104.3 12.1 104 97-200 6-152 (334)
140 PF04321 RmlD_sub_bind: RmlD s 99.2 3.1E-11 6.7E-16 106.4 8.0 85 100-200 1-109 (286)
141 TIGR01832 kduD 2-deoxy-D-gluco 99.2 1.7E-10 3.7E-15 96.5 12.1 102 98-199 4-147 (248)
142 PRK06935 2-deoxy-D-gluconate 3 99.2 2E-10 4.3E-15 97.3 12.4 102 97-198 13-156 (258)
143 PRK05717 oxidoreductase; Valid 99.2 1.6E-10 3.5E-15 97.7 11.7 73 98-170 9-91 (255)
144 PRK06124 gluconate 5-dehydroge 99.2 1.4E-10 3.1E-15 97.6 11.4 101 97-197 9-152 (256)
145 PRK06523 short chain dehydroge 99.2 2.3E-10 4.9E-15 96.6 12.5 99 97-198 7-144 (260)
146 PRK06172 short chain dehydroge 99.2 1.4E-10 3E-15 97.6 11.1 103 98-200 6-152 (253)
147 PRK05876 short chain dehydroge 99.2 1.4E-10 3.1E-15 100.6 11.4 103 97-199 4-150 (275)
148 PRK09072 short chain dehydroge 99.2 1.2E-10 2.7E-15 98.8 10.8 73 98-170 4-87 (263)
149 PRK07478 short chain dehydroge 99.2 1.9E-10 4E-15 97.0 11.6 99 98-196 5-147 (254)
150 PRK07041 short chain dehydroge 99.2 1E-10 2.2E-15 96.8 9.8 98 103-200 1-132 (230)
151 TIGR01830 3oxo_ACP_reduc 3-oxo 99.2 1.5E-10 3.4E-15 95.4 10.7 96 102-197 1-141 (239)
152 PRK08628 short chain dehydroge 99.2 2.5E-10 5.5E-15 96.2 12.0 74 97-170 5-90 (258)
153 PRK08643 acetoin reductase; Va 99.2 1.9E-10 4.2E-15 96.8 11.2 72 99-170 2-86 (256)
154 PRK08277 D-mannonate oxidoredu 99.2 2.8E-10 6.1E-15 97.3 12.0 73 98-170 9-94 (278)
155 PRK08085 gluconate 5-dehydroge 99.2 2.6E-10 5.6E-15 96.2 11.6 99 98-196 8-149 (254)
156 PRK12938 acetyacetyl-CoA reduc 99.2 3.7E-10 8E-15 94.4 12.3 98 99-196 3-144 (246)
157 PRK09242 tropinone reductase; 99.2 2.3E-10 5E-15 96.6 11.2 102 98-199 8-154 (257)
158 PRK12935 acetoacetyl-CoA reduc 99.2 3.9E-10 8.4E-15 94.3 12.1 99 98-196 5-147 (247)
159 PRK06463 fabG 3-ketoacyl-(acyl 99.2 2.7E-10 5.8E-15 96.3 11.2 100 98-197 6-143 (255)
160 PRK12937 short chain dehydroge 99.2 4.7E-10 1E-14 93.2 12.3 73 98-170 4-90 (245)
161 PRK07904 short chain dehydroge 99.2 4.7E-10 1E-14 96.0 12.5 99 97-195 6-149 (253)
162 PRK08589 short chain dehydroge 99.2 5E-10 1.1E-14 96.3 12.6 100 97-198 4-147 (272)
163 PRK07067 sorbitol dehydrogenas 99.2 2.4E-10 5.3E-15 96.5 10.4 72 99-170 6-87 (257)
164 PRK08265 short chain dehydroge 99.2 5.3E-10 1.2E-14 95.4 12.3 74 97-170 4-87 (261)
165 PRK08309 short chain dehydroge 99.1 2.1E-10 4.5E-15 95.8 9.4 93 100-193 1-113 (177)
166 PRK06949 short chain dehydroge 99.1 3.9E-10 8.4E-15 94.7 11.1 74 97-170 7-93 (258)
167 PRK07097 gluconate 5-dehydroge 99.1 4.9E-10 1.1E-14 95.4 11.8 97 98-194 9-148 (265)
168 PRK06077 fabG 3-ketoacyl-(acyl 99.1 5.2E-10 1.1E-14 93.4 11.6 103 99-201 6-150 (252)
169 PRK09730 putative NAD(P)-bindi 99.1 1.9E-10 4.1E-15 95.5 8.9 72 99-170 1-86 (247)
170 PRK07062 short chain dehydroge 99.1 4.1E-10 9E-15 95.5 11.2 101 98-198 7-152 (265)
171 PLN02253 xanthoxin dehydrogena 99.1 5.7E-10 1.2E-14 95.6 11.8 73 98-170 17-101 (280)
172 PRK06101 short chain dehydroge 99.1 3.8E-10 8.3E-15 95.0 10.5 72 99-170 1-78 (240)
173 PRK06114 short chain dehydroge 99.1 6.6E-10 1.4E-14 94.1 11.8 99 98-196 7-149 (254)
174 PRK07035 short chain dehydroge 99.1 5.2E-10 1.1E-14 94.0 11.1 100 97-196 6-149 (252)
175 TIGR02415 23BDH acetoin reduct 99.1 5E-10 1.1E-14 93.8 10.8 71 100-170 1-84 (254)
176 PRK09134 short chain dehydroge 99.1 9.3E-10 2E-14 93.2 12.4 74 97-170 7-94 (258)
177 PRK07201 short chain dehydroge 99.1 4.6E-10 1E-14 107.3 11.7 102 99-200 371-517 (657)
178 PRK07576 short chain dehydroge 99.1 6.9E-10 1.5E-14 95.0 11.5 75 96-170 6-93 (264)
179 smart00822 PKS_KR This enzymat 99.1 6.6E-10 1.4E-14 85.8 10.3 96 100-195 1-139 (180)
180 PRK06924 short chain dehydroge 99.1 5.7E-10 1.2E-14 93.5 10.6 65 99-163 1-69 (251)
181 PRK06500 short chain dehydroge 99.1 9.6E-10 2.1E-14 91.6 11.9 73 98-170 5-87 (249)
182 PRK12384 sorbitol-6-phosphate 99.1 1.1E-09 2.3E-14 92.4 12.3 72 99-170 2-88 (259)
183 PRK06198 short chain dehydroge 99.1 1.3E-09 2.7E-14 91.9 12.6 104 97-200 4-152 (260)
184 PRK06550 fabG 3-ketoacyl-(acyl 99.1 1.1E-09 2.4E-14 90.9 12.2 97 98-197 4-132 (235)
185 PRK09135 pteridine reductase; 99.1 3.1E-10 6.7E-15 94.1 8.8 73 98-170 5-92 (249)
186 COG1090 Predicted nucleoside-d 99.1 2.3E-10 5E-15 103.0 8.4 92 102-200 1-119 (297)
187 PRK05855 short chain dehydroge 99.1 6.6E-10 1.4E-14 102.9 11.7 104 98-201 314-461 (582)
188 PRK06057 short chain dehydroge 99.1 7.7E-10 1.7E-14 93.5 11.1 73 98-170 6-86 (255)
189 PRK06701 short chain dehydroge 99.1 1.2E-09 2.7E-14 95.5 12.5 103 98-200 45-190 (290)
190 PRK08226 short chain dehydroge 99.1 1E-09 2.3E-14 92.7 11.7 98 98-195 5-144 (263)
191 PRK06128 oxidoreductase; Provi 99.1 1.5E-09 3.2E-14 95.0 12.9 105 97-201 53-201 (300)
192 PRK12743 oxidoreductase; Provi 99.1 9E-10 2E-14 93.4 11.2 72 99-170 2-87 (256)
193 PRK06200 2,3-dihydroxy-2,3-dih 99.1 1.1E-09 2.4E-14 93.0 11.6 73 98-170 5-87 (263)
194 PRK08945 putative oxoacyl-(acy 99.1 1.5E-09 3.3E-14 91.1 12.2 101 96-196 9-156 (247)
195 PRK06113 7-alpha-hydroxysteroi 99.1 1.2E-09 2.6E-14 92.4 11.3 101 97-197 9-151 (255)
196 PRK08642 fabG 3-ketoacyl-(acyl 99.1 1.5E-09 3.3E-14 90.6 11.6 72 99-170 5-88 (253)
197 PRK06139 short chain dehydroge 99.1 1.7E-09 3.7E-14 97.4 12.5 103 97-199 5-150 (330)
198 PRK05867 short chain dehydroge 99.1 1.4E-09 3E-14 91.9 11.2 73 98-170 8-93 (253)
199 PRK06171 sorbitol-6-phosphate 99.1 2.5E-09 5.3E-14 90.8 12.8 71 97-170 7-84 (266)
200 PRK06483 dihydromonapterin red 99.1 1.7E-09 3.8E-14 90.2 11.0 72 99-170 2-81 (236)
201 PRK12481 2-deoxy-D-gluconate 3 99.1 2.5E-09 5.4E-14 91.0 12.1 74 97-170 6-90 (251)
202 PRK07985 oxidoreductase; Provi 99.1 4.4E-09 9.6E-14 92.2 13.9 104 97-201 47-195 (294)
203 PRK08340 glucose-1-dehydrogena 99.1 1.9E-09 4E-14 91.6 11.2 71 100-170 1-83 (259)
204 PRK05854 short chain dehydroge 99.0 1.6E-09 3.5E-14 95.9 10.9 75 96-170 11-100 (313)
205 TIGR03325 BphB_TodD cis-2,3-di 99.0 2.2E-09 4.9E-14 91.2 11.2 73 98-170 4-86 (262)
206 PRK08324 short chain dehydroge 99.0 1.4E-09 3.1E-14 106.4 11.3 101 98-198 421-564 (681)
207 PRK07677 short chain dehydroge 99.0 2.7E-09 5.9E-14 90.0 11.4 71 100-170 2-85 (252)
208 PRK06123 short chain dehydroge 99.0 2.1E-09 4.7E-14 89.7 10.6 72 99-170 2-87 (248)
209 KOG4039 Serine/threonine kinas 99.0 1.8E-09 4E-14 92.8 9.2 103 98-201 17-140 (238)
210 PRK05872 short chain dehydroge 99.0 4.7E-09 1E-13 91.8 11.7 74 97-170 7-92 (296)
211 PRK12748 3-ketoacyl-(acyl-carr 99.0 4.1E-09 8.8E-14 89.2 11.0 101 99-199 5-161 (256)
212 PRK06947 glucose-1-dehydrogena 99.0 4.1E-09 8.8E-14 88.2 10.8 72 99-170 2-87 (248)
213 PRK08278 short chain dehydroge 99.0 9.8E-09 2.1E-13 88.5 13.1 73 98-170 5-97 (273)
214 PRK12742 oxidoreductase; Provi 99.0 3.6E-09 7.8E-14 87.7 10.0 73 98-170 5-82 (237)
215 PRK06953 short chain dehydroge 99.0 1.7E-09 3.8E-14 89.8 8.1 72 99-170 1-77 (222)
216 PRK08416 7-alpha-hydroxysteroi 99.0 7.1E-09 1.5E-13 88.2 11.9 74 97-170 6-94 (260)
217 PRK07832 short chain dehydroge 99.0 5.5E-09 1.2E-13 89.5 11.1 71 100-170 1-85 (272)
218 PRK08993 2-deoxy-D-gluconate 3 99.0 8.9E-09 1.9E-13 87.3 12.1 73 98-170 9-92 (253)
219 TIGR01831 fabG_rel 3-oxoacyl-( 99.0 4.9E-09 1.1E-13 87.3 10.3 69 102-170 1-83 (239)
220 PRK08936 glucose-1-dehydrogena 99.0 1.3E-08 2.8E-13 86.3 12.9 74 97-170 5-92 (261)
221 COG0300 DltE Short-chain dehyd 99.0 7E-09 1.5E-13 92.6 11.7 105 96-200 3-151 (265)
222 PRK12747 short chain dehydroge 99.0 9.8E-09 2.1E-13 86.5 11.7 102 99-200 4-153 (252)
223 TIGR02632 RhaD_aldol-ADH rhamn 98.9 5.8E-09 1.3E-13 102.5 11.7 73 98-170 413-500 (676)
224 PRK08177 short chain dehydroge 98.9 3.2E-09 7E-14 88.3 8.4 72 99-170 1-78 (225)
225 PRK08217 fabG 3-ketoacyl-(acyl 98.9 9.1E-09 2E-13 85.5 11.1 73 98-170 4-89 (253)
226 PRK08703 short chain dehydroge 98.9 1.6E-08 3.5E-13 84.5 12.2 74 97-170 4-94 (239)
227 COG1091 RfbD dTDP-4-dehydrorha 98.9 3.9E-09 8.5E-14 94.9 8.8 84 100-200 1-108 (281)
228 TIGR01289 LPOR light-dependent 98.9 1.5E-08 3.2E-13 89.8 12.2 72 99-170 3-88 (314)
229 PRK05786 fabG 3-ketoacyl-(acyl 98.9 2.7E-09 5.8E-14 88.6 6.6 73 98-170 4-88 (238)
230 PRK06125 short chain dehydroge 98.9 1.9E-08 4.1E-13 85.2 11.9 73 98-170 6-88 (259)
231 PRK09009 C factor cell-cell si 98.9 1.4E-08 3.1E-13 84.4 10.9 69 100-170 1-74 (235)
232 PRK06484 short chain dehydroge 98.9 1.7E-08 3.7E-13 94.1 12.3 75 96-170 266-350 (520)
233 PRK07792 fabG 3-ketoacyl-(acyl 98.9 1.8E-08 3.9E-13 88.8 11.1 74 97-170 10-96 (306)
234 PF00106 adh_short: short chai 98.9 1.8E-08 3.8E-13 79.3 9.9 102 100-201 1-144 (167)
235 PRK07831 short chain dehydroge 98.9 2.8E-08 6.1E-13 84.3 11.5 73 98-170 16-104 (262)
236 PRK05884 short chain dehydroge 98.9 5.7E-09 1.2E-13 87.8 6.9 71 100-170 1-76 (223)
237 COG4221 Short-chain alcohol de 98.8 3.3E-08 7.1E-13 87.5 11.3 98 97-194 4-142 (246)
238 PRK12367 short chain dehydroge 98.8 1.7E-08 3.6E-13 87.1 9.1 73 98-170 13-86 (245)
239 KOG2865 NADH:ubiquinone oxidor 98.8 1.2E-08 2.7E-13 93.0 8.2 98 99-196 61-181 (391)
240 PRK08261 fabG 3-ketoacyl-(acyl 98.8 4.7E-08 1E-12 90.2 12.1 75 96-170 207-291 (450)
241 PRK12859 3-ketoacyl-(acyl-carr 98.8 7.7E-08 1.7E-12 81.9 12.5 102 97-198 4-161 (256)
242 PRK06484 short chain dehydroge 98.8 5E-08 1.1E-12 91.0 12.1 73 98-170 4-86 (520)
243 PF08659 KR: KR domain; Inter 98.8 5.9E-08 1.3E-12 80.0 10.8 99 101-199 2-144 (181)
244 PRK07424 bifunctional sterol d 98.8 2.3E-08 5E-13 93.6 9.3 73 98-170 177-252 (406)
245 PRK12744 short chain dehydroge 98.8 3.4E-08 7.3E-13 83.6 9.3 73 98-170 7-96 (257)
246 PLN02780 ketoreductase/ oxidor 98.8 5.5E-08 1.2E-12 87.1 11.1 98 99-196 53-197 (320)
247 PRK07578 short chain dehydroge 98.8 9.3E-08 2E-12 78.2 11.4 59 100-170 1-62 (199)
248 PRK07791 short chain dehydroge 98.8 1.6E-07 3.4E-12 81.9 12.9 73 98-170 5-99 (286)
249 PLN00015 protochlorophyllide r 98.8 6.3E-08 1.4E-12 85.3 10.3 94 103-196 1-141 (308)
250 PRK06940 short chain dehydroge 98.7 8.5E-08 1.8E-12 83.1 10.6 70 99-170 2-83 (275)
251 TIGR02685 pter_reduc_Leis pter 98.7 4.6E-08 1E-12 83.6 7.7 71 100-170 2-91 (267)
252 COG1748 LYS9 Saccharopine dehy 98.7 7.6E-08 1.7E-12 90.1 9.5 88 99-187 1-96 (389)
253 KOG1205 Predicted dehydrogenas 98.7 1.8E-07 3.9E-12 84.3 11.5 104 93-196 6-154 (282)
254 PRK05599 hypothetical protein; 98.7 2.8E-07 6.1E-12 78.3 11.7 70 100-170 1-84 (246)
255 TIGR01500 sepiapter_red sepiap 98.7 1.7E-07 3.7E-12 79.6 10.3 62 101-162 2-75 (256)
256 PRK08862 short chain dehydroge 98.7 3.3E-07 7.2E-12 77.8 11.7 73 98-170 4-90 (227)
257 PF03435 Saccharop_dh: Sacchar 98.6 1.2E-07 2.7E-12 86.2 9.2 86 102-189 1-96 (386)
258 TIGR00715 precor6x_red precorr 98.6 3.1E-07 6.7E-12 81.4 10.1 90 100-190 1-99 (256)
259 COG1089 Gmd GDP-D-mannose dehy 98.6 3.2E-07 7E-12 83.6 9.0 102 99-200 2-139 (345)
260 PTZ00325 malate dehydrogenase; 98.5 5.8E-07 1.3E-11 81.9 9.9 102 96-197 5-130 (321)
261 cd01078 NAD_bind_H4MPT_DH NADP 98.5 3.1E-07 6.7E-12 76.2 7.1 74 97-170 26-104 (194)
262 PRK14874 aspartate-semialdehyd 98.5 1.1E-06 2.5E-11 79.7 10.4 88 99-192 1-95 (334)
263 KOG1208 Dehydrogenases with di 98.5 1.3E-06 2.9E-11 79.4 10.4 98 97-194 33-173 (314)
264 KOG0747 Putative NAD+-dependen 98.4 5E-07 1.1E-11 82.2 7.2 106 100-205 7-145 (331)
265 PRK06079 enoyl-(acyl carrier p 98.4 8.5E-07 1.8E-11 75.6 8.0 73 98-170 6-90 (252)
266 PRK09496 trkA potassium transp 98.4 1.5E-06 3.3E-11 79.9 10.2 90 100-190 1-98 (453)
267 PRK07370 enoyl-(acyl carrier p 98.4 2E-06 4.3E-11 73.7 10.1 73 98-170 5-94 (258)
268 COG0569 TrkA K+ transport syst 98.4 3E-06 6.5E-11 73.2 10.3 90 100-190 1-99 (225)
269 PRK07889 enoyl-(acyl carrier p 98.4 1.5E-06 3.2E-11 74.4 8.3 74 97-170 5-92 (256)
270 PRK08303 short chain dehydroge 98.4 2.1E-06 4.6E-11 76.3 9.6 74 97-170 6-102 (305)
271 cd01336 MDH_cytoplasmic_cytoso 98.3 8.7E-07 1.9E-11 80.6 6.5 69 101-170 4-85 (325)
272 PRK06720 hypothetical protein; 98.3 3.3E-06 7.1E-11 69.8 9.1 74 97-170 14-100 (169)
273 PLN00106 malate dehydrogenase 98.3 3.3E-06 7.1E-11 77.1 9.8 100 97-196 16-139 (323)
274 PF02254 TrkA_N: TrkA-N domain 98.3 5.6E-06 1.2E-10 62.6 9.5 68 102-170 1-69 (116)
275 PLN02968 Probable N-acetyl-gam 98.3 1.6E-06 3.5E-11 80.7 7.7 99 98-198 37-141 (381)
276 PRK08594 enoyl-(acyl carrier p 98.3 3.1E-06 6.6E-11 72.7 8.7 73 98-170 6-94 (257)
277 KOG4288 Predicted oxidoreducta 98.2 6.7E-07 1.4E-11 79.6 3.3 97 99-195 52-165 (283)
278 PRK06732 phosphopantothenate-- 98.2 4E-06 8.8E-11 72.6 7.9 67 103-170 20-88 (229)
279 PRK09620 hypothetical protein; 98.2 3.8E-06 8.2E-11 73.2 7.6 73 98-170 2-94 (229)
280 PRK06505 enoyl-(acyl carrier p 98.2 5.4E-06 1.2E-10 72.0 8.1 72 98-170 6-92 (271)
281 KOG1221 Acyl-CoA reductase [Li 98.2 5.9E-06 1.3E-10 79.1 9.1 100 97-196 10-159 (467)
282 PRK07533 enoyl-(acyl carrier p 98.2 6.7E-06 1.5E-10 70.3 8.4 73 98-170 9-95 (258)
283 TIGR02813 omega_3_PfaA polyket 98.2 1.1E-05 2.4E-10 89.7 12.1 101 98-198 1996-2183(2582)
284 PRK08415 enoyl-(acyl carrier p 98.2 6.9E-06 1.5E-10 71.6 8.4 72 98-170 4-90 (274)
285 PRK07984 enoyl-(acyl carrier p 98.2 8.9E-06 1.9E-10 70.5 8.5 73 98-170 5-91 (262)
286 PRK08690 enoyl-(acyl carrier p 98.1 1.1E-05 2.3E-10 69.4 8.5 73 98-170 5-91 (261)
287 PRK05671 aspartate-semialdehyd 98.1 1E-05 2.2E-10 74.3 8.6 89 99-193 4-99 (336)
288 PRK14982 acyl-ACP reductase; P 98.1 3.4E-06 7.3E-11 77.8 5.2 69 96-170 152-222 (340)
289 PRK09496 trkA potassium transp 98.1 2.1E-05 4.5E-10 72.4 10.2 95 97-192 229-331 (453)
290 TIGR01296 asd_B aspartate-semi 98.1 1.8E-05 3.9E-10 72.4 9.3 86 101-192 1-93 (339)
291 PRK06603 enoyl-(acyl carrier p 98.1 1.3E-05 2.8E-10 68.8 7.7 72 99-170 8-93 (260)
292 PRK06997 enoyl-(acyl carrier p 98.1 1.3E-05 2.7E-10 69.0 7.2 72 98-170 5-91 (260)
293 PRK08159 enoyl-(acyl carrier p 98.0 1.6E-05 3.4E-10 69.1 7.7 71 99-170 10-95 (272)
294 COG1028 FabG Dehydrogenases wi 98.0 3.2E-05 7E-10 64.7 9.1 74 97-170 3-93 (251)
295 PRK05086 malate dehydrogenase; 98.0 4.7E-05 1E-09 68.9 9.6 94 100-195 1-121 (312)
296 PLN02819 lysine-ketoglutarate 98.0 3.6E-05 7.8E-10 79.8 9.8 99 91-191 561-679 (1042)
297 PF01118 Semialdhyde_dh: Semia 97.9 0.00014 3E-09 56.6 10.5 86 101-192 1-98 (121)
298 PRK10669 putative cation:proto 97.9 7E-05 1.5E-09 72.0 10.6 71 99-170 417-488 (558)
299 PRK00436 argC N-acetyl-gamma-g 97.9 4.1E-05 8.9E-10 69.9 8.6 93 99-194 2-102 (343)
300 KOG1610 Corticosteroid 11-beta 97.9 0.00013 2.8E-09 67.0 11.4 75 96-170 26-113 (322)
301 KOG1431 GDP-L-fucose synthetas 97.9 3.4E-05 7.4E-10 69.0 6.9 87 99-199 1-114 (315)
302 TIGR01850 argC N-acetyl-gamma- 97.9 5.8E-05 1.3E-09 69.1 8.2 92 100-194 1-102 (346)
303 PLN02730 enoyl-[acyl-carrier-p 97.8 0.00017 3.8E-09 64.9 10.9 36 97-133 7-44 (303)
304 PRK08664 aspartate-semialdehyd 97.8 0.00012 2.6E-09 66.9 9.1 94 99-196 3-113 (349)
305 PRK03659 glutathione-regulated 97.8 0.00016 3.4E-09 70.7 10.4 71 99-170 400-471 (601)
306 KOG2733 Uncharacterized membra 97.8 5.6E-05 1.2E-09 70.8 6.4 87 99-186 5-112 (423)
307 KOG1201 Hydroxysteroid 17-beta 97.8 0.0004 8.6E-09 63.4 11.8 105 97-201 36-182 (300)
308 PLN02383 aspartate semialdehyd 97.7 0.00031 6.8E-09 64.6 11.1 88 98-193 6-102 (344)
309 COG3967 DltE Short-chain dehyd 97.7 0.0002 4.3E-09 63.1 8.5 73 98-170 4-85 (245)
310 KOG0725 Reductases with broad 97.7 0.00071 1.5E-08 60.1 12.1 103 96-198 5-156 (270)
311 KOG1210 Predicted 3-ketosphing 97.7 0.00028 6E-09 65.0 9.4 75 96-170 30-119 (331)
312 PRK12548 shikimate 5-dehydroge 97.7 0.00016 3.6E-09 64.4 7.6 72 98-170 125-206 (289)
313 PRK06129 3-hydroxyacyl-CoA deh 97.6 9.7E-05 2.1E-09 65.9 6.1 98 98-196 1-121 (308)
314 KOG1372 GDP-mannose 4,6 dehydr 97.6 0.00031 6.6E-09 63.8 8.2 103 96-198 25-166 (376)
315 COG3268 Uncharacterized conser 97.5 0.00015 3.2E-09 67.5 5.9 86 99-186 6-100 (382)
316 PRK12428 3-alpha-hydroxysteroi 97.5 0.0002 4.4E-09 60.6 6.3 78 115-197 1-102 (241)
317 PRK04148 hypothetical protein; 97.5 0.00049 1.1E-08 56.1 8.1 88 99-190 17-109 (134)
318 PRK00048 dihydrodipicolinate r 97.5 0.00077 1.7E-08 59.1 9.2 82 99-187 1-88 (257)
319 PRK05579 bifunctional phosphop 97.4 0.00049 1.1E-08 64.6 8.2 69 97-170 186-274 (399)
320 PRK13656 trans-2-enoyl-CoA red 97.4 0.00064 1.4E-08 64.2 8.7 71 99-170 41-138 (398)
321 PRK03562 glutathione-regulated 97.4 0.00087 1.9E-08 65.9 9.7 71 99-170 400-471 (621)
322 cd00704 MDH Malate dehydrogena 97.4 0.00042 9.1E-09 63.2 7.0 62 101-170 2-83 (323)
323 TIGR00978 asd_EA aspartate-sem 97.4 0.00051 1.1E-08 62.6 7.3 87 100-192 1-105 (341)
324 KOG1207 Diacetyl reductase/L-x 97.4 0.00043 9.3E-09 60.1 6.3 70 95-164 3-75 (245)
325 PF01113 DapB_N: Dihydrodipico 97.4 0.00066 1.4E-08 53.4 6.9 85 100-191 1-99 (124)
326 KOG1014 17 beta-hydroxysteroid 97.3 0.00051 1.1E-08 63.0 6.7 97 100-196 50-191 (312)
327 KOG1209 1-Acyl dihydroxyaceton 97.3 0.00043 9.3E-09 61.6 6.0 66 98-163 6-73 (289)
328 PF03446 NAD_binding_2: NAD bi 97.3 0.00037 8E-09 56.7 4.8 64 99-170 1-64 (163)
329 PF13561 adh_short_C2: Enoyl-( 97.3 0.00052 1.1E-08 57.8 5.7 65 106-170 1-80 (241)
330 TIGR02853 spore_dpaA dipicolin 97.3 0.0019 4.2E-08 57.9 9.6 68 97-170 149-216 (287)
331 PRK12475 thiamine/molybdopteri 97.3 0.0031 6.7E-08 57.9 11.1 99 96-197 21-154 (338)
332 PRK14106 murD UDP-N-acetylmura 97.3 0.0016 3.4E-08 60.3 9.2 81 98-184 4-93 (450)
333 TIGR01915 npdG NADPH-dependent 97.2 0.00038 8.2E-09 59.2 4.5 65 100-170 1-75 (219)
334 KOG1200 Mitochondrial/plastidi 97.2 0.004 8.6E-08 54.9 10.7 72 99-170 14-97 (256)
335 PRK07688 thiamine/molybdopteri 97.2 0.0039 8.4E-08 57.3 11.2 101 95-198 20-155 (339)
336 TIGR01758 MDH_euk_cyt malate d 97.2 0.00093 2E-08 61.0 6.7 64 101-170 1-82 (324)
337 PRK10537 voltage-gated potassi 97.1 0.0042 9.1E-08 58.3 10.7 69 99-170 240-309 (393)
338 PF01488 Shikimate_DH: Shikima 97.1 0.00078 1.7E-08 53.5 4.7 71 94-170 7-82 (135)
339 cd08259 Zn_ADH5 Alcohol dehydr 97.1 0.0038 8.1E-08 53.8 9.3 93 98-194 162-259 (332)
340 PRK08057 cobalt-precorrin-6x r 97.1 0.0063 1.4E-07 53.9 10.6 89 99-190 2-99 (248)
341 PRK06019 phosphoribosylaminoim 97.1 0.0026 5.7E-08 58.2 8.5 68 99-169 2-69 (372)
342 PRK06300 enoyl-(acyl carrier p 97.0 0.01 2.2E-07 53.2 11.6 37 96-132 5-43 (299)
343 PRK06598 aspartate-semialdehyd 97.0 0.0046 9.9E-08 57.9 9.6 88 99-192 1-99 (369)
344 COG0604 Qor NADPH:quinone redu 97.0 0.0067 1.4E-07 55.1 10.2 95 97-194 141-244 (326)
345 COG2085 Predicted dinucleotide 97.0 0.0021 4.5E-08 56.1 6.6 86 100-194 1-95 (211)
346 TIGR00518 alaDH alanine dehydr 97.0 0.0026 5.6E-08 58.9 7.4 72 98-170 166-237 (370)
347 cd01065 NAD_bind_Shikimate_DH 97.0 0.0014 3.1E-08 51.6 5.0 69 98-170 18-88 (155)
348 KOG1611 Predicted short chain- 96.9 0.0066 1.4E-07 54.0 9.4 71 100-170 4-91 (249)
349 PF10727 Rossmann-like: Rossma 96.9 0.0012 2.5E-08 53.1 4.2 91 95-192 6-105 (127)
350 PRK08306 dipicolinate synthase 96.9 0.011 2.4E-07 53.1 10.5 67 98-170 151-217 (296)
351 PF00056 Ldh_1_N: lactate/mala 96.8 0.0039 8.4E-08 50.2 6.7 64 100-170 1-76 (141)
352 PRK09288 purT phosphoribosylgl 96.8 0.0069 1.5E-07 55.0 8.7 70 98-170 11-82 (395)
353 PRK06728 aspartate-semialdehyd 96.8 0.015 3.2E-07 54.1 10.7 89 98-193 4-101 (347)
354 cd08295 double_bond_reductase_ 96.8 0.0039 8.5E-08 55.0 6.7 93 97-192 150-252 (338)
355 KOG4169 15-hydroxyprostaglandi 96.7 0.0037 8E-08 55.8 6.2 73 98-170 4-90 (261)
356 PRK11863 N-acetyl-gamma-glutam 96.7 0.0092 2E-07 54.7 8.8 77 99-193 2-83 (313)
357 TIGR02114 coaB_strep phosphopa 96.7 0.0038 8.3E-08 54.0 5.7 60 105-170 21-87 (227)
358 TIGR00521 coaBC_dfp phosphopan 96.6 0.0069 1.5E-07 56.9 7.7 69 97-170 183-272 (390)
359 PF02571 CbiJ: Precorrin-6x re 96.6 0.026 5.7E-07 49.9 10.7 90 100-191 1-101 (249)
360 PRK08040 putative semialdehyde 96.6 0.017 3.7E-07 53.3 9.8 89 98-193 3-99 (336)
361 PRK00094 gpsA NAD(P)H-dependen 96.6 0.0035 7.5E-08 55.2 5.1 71 99-170 1-78 (325)
362 PRK08655 prephenate dehydrogen 96.6 0.0052 1.1E-07 58.1 6.5 64 100-170 1-65 (437)
363 PRK11199 tyrA bifunctional cho 96.6 0.0054 1.2E-07 56.8 6.4 35 99-133 98-132 (374)
364 PRK00258 aroE shikimate 5-dehy 96.6 0.0027 5.9E-08 56.1 4.3 71 97-170 121-192 (278)
365 KOG2774 NAD dependent epimeras 96.6 0.005 1.1E-07 55.8 5.9 101 98-200 43-167 (366)
366 TIGR02356 adenyl_thiF thiazole 96.5 0.022 4.9E-07 48.2 9.6 99 96-197 18-149 (202)
367 cd05294 LDH-like_MDH_nadp A la 96.5 0.0037 8E-08 56.4 5.1 34 100-133 1-36 (309)
368 TIGR01142 purT phosphoribosylg 96.5 0.012 2.5E-07 53.3 8.1 67 101-170 1-69 (380)
369 TIGR01035 hemA glutamyl-tRNA r 96.5 0.0041 8.9E-08 58.3 5.2 69 96-170 177-247 (417)
370 TIGR02825 B4_12hDH leukotriene 96.5 0.0066 1.4E-07 53.2 6.2 93 98-193 138-239 (325)
371 PLN02948 phosphoribosylaminoim 96.5 0.041 8.8E-07 54.0 12.1 77 91-170 14-90 (577)
372 cd05213 NAD_bind_Glutamyl_tRNA 96.4 0.0045 9.8E-08 55.7 5.0 68 97-170 176-245 (311)
373 TIGR01851 argC_other N-acetyl- 96.4 0.013 2.9E-07 53.7 8.0 75 100-192 2-81 (310)
374 PRK00045 hemA glutamyl-tRNA re 96.4 0.0057 1.2E-07 57.3 5.3 69 97-170 180-249 (423)
375 PF04127 DFP: DNA / pantothena 96.4 0.018 3.8E-07 48.9 7.8 60 106-170 26-89 (185)
376 TIGR00872 gnd_rel 6-phosphoglu 96.3 0.0092 2E-07 53.2 6.3 66 100-170 1-66 (298)
377 cd01075 NAD_bind_Leu_Phe_Val_D 96.3 0.016 3.4E-07 49.3 7.4 40 97-137 26-65 (200)
378 cd08230 glucose_DH Glucose deh 96.3 0.032 7E-07 49.8 9.8 91 98-193 172-271 (355)
379 cd08266 Zn_ADH_like1 Alcohol d 96.3 0.037 8.1E-07 47.3 9.7 95 98-195 166-269 (342)
380 smart00859 Semialdhyde_dh Semi 96.3 0.029 6.3E-07 43.1 8.1 89 101-193 1-101 (122)
381 PRK06522 2-dehydropantoate 2-r 96.3 0.011 2.4E-07 51.4 6.3 69 100-170 1-73 (304)
382 cd08250 Mgc45594_like Mgc45594 96.3 0.055 1.2E-06 46.9 10.6 96 97-194 138-240 (329)
383 cd08293 PTGR2 Prostaglandin re 96.2 0.019 4.1E-07 50.4 7.8 70 100-170 156-231 (345)
384 PRK02472 murD UDP-N-acetylmura 96.2 0.028 6E-07 52.1 9.1 82 98-185 4-94 (447)
385 cd08244 MDR_enoyl_red Possible 96.2 0.038 8.3E-07 47.5 9.4 94 97-193 141-243 (324)
386 PRK09260 3-hydroxybutyryl-CoA 96.2 0.006 1.3E-07 53.8 4.4 68 100-170 2-88 (288)
387 TIGR01161 purK phosphoribosyla 96.2 0.018 3.8E-07 52.0 7.5 65 101-168 1-65 (352)
388 PRK11880 pyrroline-5-carboxyla 96.2 0.018 4E-07 49.7 7.3 64 99-170 2-69 (267)
389 PLN03154 putative allyl alcoho 96.2 0.044 9.4E-07 49.3 9.9 93 97-192 157-259 (348)
390 COG2130 Putative NADP-dependen 96.2 0.021 4.6E-07 52.8 7.7 103 96-199 148-257 (340)
391 PRK05476 S-adenosyl-L-homocyst 96.1 0.015 3.3E-07 55.3 7.0 65 97-170 210-274 (425)
392 PF00899 ThiF: ThiF family; I 96.1 0.083 1.8E-06 41.4 10.1 96 99-197 2-130 (135)
393 cd08294 leukotriene_B4_DH_like 96.1 0.02 4.3E-07 49.6 7.1 94 97-193 142-243 (329)
394 PRK14618 NAD(P)H-dependent gly 96.1 0.021 4.4E-07 51.2 7.4 71 99-170 4-81 (328)
395 cd01080 NAD_bind_m-THF_DH_Cycl 96.1 0.019 4.1E-07 48.0 6.7 55 95-170 40-94 (168)
396 PF03807 F420_oxidored: NADP o 96.1 0.0074 1.6E-07 44.1 3.8 63 101-170 1-68 (96)
397 PF13380 CoA_binding_2: CoA bi 96.1 0.0072 1.6E-07 47.2 3.9 81 100-192 1-88 (116)
398 PRK11559 garR tartronate semia 96.1 0.012 2.6E-07 51.7 5.7 63 100-170 3-65 (296)
399 PRK06718 precorrin-2 dehydroge 96.1 0.025 5.5E-07 48.2 7.3 69 96-170 7-77 (202)
400 PLN02688 pyrroline-5-carboxyla 96.0 0.014 3.1E-07 50.4 5.8 63 100-170 1-68 (266)
401 TIGR01745 asd_gamma aspartate- 96.0 0.043 9.3E-07 51.5 9.2 88 100-192 1-98 (366)
402 PRK08762 molybdopterin biosynt 96.0 0.085 1.8E-06 48.7 11.1 96 97-195 133-261 (376)
403 TIGR01019 sucCoAalpha succinyl 96.0 0.052 1.1E-06 49.1 9.5 85 99-193 6-97 (286)
404 cd01485 E1-1_like Ubiquitin ac 96.0 0.11 2.5E-06 43.9 11.0 101 96-198 16-152 (198)
405 COG0002 ArgC Acetylglutamate s 96.0 0.031 6.7E-07 52.2 8.1 90 99-192 2-102 (349)
406 PRK07066 3-hydroxybutyryl-CoA 96.0 0.027 5.9E-07 51.6 7.7 71 99-170 7-90 (321)
407 TIGR01505 tartro_sem_red 2-hyd 96.0 0.0093 2E-07 52.5 4.5 62 101-170 1-62 (291)
408 KOG0023 Alcohol dehydrogenase, 96.0 0.033 7.2E-07 51.9 8.2 94 98-194 181-282 (360)
409 PRK07417 arogenate dehydrogena 96.0 0.011 2.5E-07 51.9 5.0 63 100-170 1-64 (279)
410 PF13241 NAD_binding_7: Putati 96.0 0.028 6.2E-07 42.6 6.5 84 96-192 4-92 (103)
411 PRK09599 6-phosphogluconate de 96.0 0.023 4.9E-07 50.6 6.8 66 100-170 1-66 (301)
412 KOG1478 3-keto sterol reductas 95.9 0.0088 1.9E-07 54.5 4.2 72 99-170 3-96 (341)
413 PRK07877 hypothetical protein; 95.9 0.034 7.4E-07 56.2 8.7 95 94-192 102-229 (722)
414 COG0136 Asd Aspartate-semialde 95.9 0.031 6.6E-07 51.9 7.7 92 99-197 1-101 (334)
415 PRK00066 ldh L-lactate dehydro 95.9 0.051 1.1E-06 49.3 9.0 66 97-170 4-80 (315)
416 TIGR01470 cysG_Nterm siroheme 95.9 0.058 1.2E-06 46.2 8.9 83 96-184 6-95 (205)
417 PRK06849 hypothetical protein; 95.9 0.04 8.7E-07 50.4 8.3 38 98-135 3-40 (389)
418 PRK07819 3-hydroxybutyryl-CoA 95.9 0.013 2.8E-07 52.2 4.9 39 98-137 4-42 (286)
419 PRK14619 NAD(P)H-dependent gly 95.8 0.025 5.5E-07 50.4 6.7 51 99-170 4-54 (308)
420 cd08239 THR_DH_like L-threonin 95.8 0.09 1.9E-06 46.2 10.1 92 97-192 162-263 (339)
421 cd08253 zeta_crystallin Zeta-c 95.8 0.031 6.7E-07 47.2 6.8 92 98-192 144-244 (325)
422 cd01483 E1_enzyme_family Super 95.8 0.12 2.7E-06 40.6 9.9 91 101-194 1-124 (143)
423 PRK06901 aspartate-semialdehyd 95.7 0.043 9.2E-07 50.7 7.8 84 99-192 3-96 (322)
424 TIGR03451 mycoS_dep_FDH mycoth 95.7 0.086 1.9E-06 47.2 9.6 93 97-193 175-278 (358)
425 cd05188 MDR Medium chain reduc 95.7 0.029 6.4E-07 46.3 6.2 95 97-195 133-236 (271)
426 PRK15461 NADH-dependent gamma- 95.7 0.02 4.3E-07 51.0 5.4 63 100-170 2-64 (296)
427 PF02826 2-Hacid_dh_C: D-isome 95.7 0.026 5.6E-07 46.6 5.8 66 96-170 33-98 (178)
428 cd05288 PGDH Prostaglandin deh 95.7 0.14 3.1E-06 44.3 10.5 91 98-193 145-246 (329)
429 PLN02740 Alcohol dehydrogenase 95.7 0.11 2.4E-06 47.1 10.2 95 97-193 197-302 (381)
430 cd01337 MDH_glyoxysomal_mitoch 95.6 0.022 4.7E-07 52.0 5.4 69 100-170 1-75 (310)
431 cd08245 CAD Cinnamyl alcohol d 95.6 0.076 1.7E-06 46.2 8.6 92 97-192 161-257 (330)
432 cd01487 E1_ThiF_like E1_ThiF_l 95.6 0.16 3.4E-06 42.3 10.0 91 101-194 1-124 (174)
433 TIGR02354 thiF_fam2 thiamine b 95.6 0.13 2.8E-06 43.9 9.6 102 95-198 17-151 (200)
434 PRK06130 3-hydroxybutyryl-CoA 95.6 0.07 1.5E-06 47.3 8.4 71 99-170 4-86 (311)
435 KOG1198 Zinc-binding oxidoredu 95.5 0.067 1.5E-06 49.4 8.5 72 96-170 155-232 (347)
436 PRK08644 thiamine biosynthesis 95.5 0.17 3.7E-06 43.4 10.3 101 95-198 24-157 (212)
437 PRK06223 malate dehydrogenase; 95.5 0.025 5.5E-07 50.2 5.3 70 99-170 2-77 (307)
438 PLN00203 glutamyl-tRNA reducta 95.4 0.021 4.6E-07 55.5 5.0 70 97-170 264-336 (519)
439 cd08243 quinone_oxidoreductase 95.4 0.079 1.7E-06 45.1 7.9 94 97-192 141-239 (320)
440 PRK05678 succinyl-CoA syntheta 95.4 0.11 2.5E-06 47.0 9.3 85 99-193 8-99 (291)
441 PRK07502 cyclohexadienyl dehyd 95.4 0.041 8.9E-07 48.9 6.4 67 98-170 5-73 (307)
442 cd01338 MDH_choloroplast_like 95.4 0.043 9.3E-07 50.1 6.6 64 100-170 3-85 (322)
443 COG0026 PurK Phosphoribosylami 95.4 0.063 1.4E-06 50.6 7.7 66 99-167 1-66 (375)
444 cd08292 ETR_like_2 2-enoyl thi 95.4 0.082 1.8E-06 45.5 7.9 92 98-192 139-239 (324)
445 cd08281 liver_ADH_like1 Zinc-d 95.4 0.15 3.2E-06 45.9 9.9 92 98-193 191-292 (371)
446 cd08301 alcohol_DH_plants Plan 95.3 0.17 3.6E-06 45.4 10.1 94 97-193 186-291 (369)
447 cd05280 MDR_yhdh_yhfp Yhdh and 95.3 0.19 4.1E-06 43.2 10.0 91 100-193 148-245 (325)
448 TIGR03201 dearomat_had 6-hydro 95.3 0.13 2.8E-06 45.8 9.3 40 97-137 165-204 (349)
449 cd05291 HicDH_like L-2-hydroxy 95.3 0.065 1.4E-06 48.0 7.3 63 100-170 1-75 (306)
450 TIGR01772 MDH_euk_gproteo mala 95.3 0.041 9E-07 50.2 6.1 68 101-170 1-74 (312)
451 PRK04207 glyceraldehyde-3-phos 95.3 0.084 1.8E-06 48.5 8.2 93 99-193 1-111 (341)
452 TIGR00507 aroE shikimate 5-deh 95.2 0.023 4.9E-07 49.9 4.1 39 98-137 116-154 (270)
453 TIGR03366 HpnZ_proposed putati 95.2 0.07 1.5E-06 46.2 7.1 91 98-192 120-219 (280)
454 cd08289 MDR_yhfp_like Yhfp put 95.2 0.071 1.5E-06 46.1 7.1 92 99-193 147-245 (326)
455 COG0289 DapB Dihydrodipicolina 95.2 0.12 2.7E-06 46.6 8.8 36 99-134 2-39 (266)
456 PRK01438 murD UDP-N-acetylmura 95.2 0.12 2.7E-06 48.4 9.2 81 98-185 15-104 (480)
457 PRK08293 3-hydroxybutyryl-CoA 95.2 0.02 4.3E-07 50.5 3.7 71 99-170 3-91 (287)
458 PRK12490 6-phosphogluconate de 95.2 0.065 1.4E-06 47.7 7.0 66 100-170 1-66 (299)
459 PRK06719 precorrin-2 dehydroge 95.2 0.1 2.2E-06 42.8 7.7 68 96-170 10-77 (157)
460 PRK13940 glutamyl-tRNA reducta 95.2 0.031 6.7E-07 52.8 5.1 71 96-170 178-249 (414)
461 TIGR02818 adh_III_F_hyde S-(hy 95.1 0.19 4.1E-06 45.4 9.9 95 97-193 184-289 (368)
462 PRK03369 murD UDP-N-acetylmura 95.1 0.14 2.9E-06 48.9 9.3 85 96-186 9-97 (488)
463 PTZ00187 succinyl-CoA syntheta 95.1 0.17 3.6E-06 46.7 9.5 89 98-193 28-122 (317)
464 cd08300 alcohol_DH_class_III c 95.1 0.23 5E-06 44.7 10.3 95 97-193 185-290 (368)
465 cd01492 Aos1_SUMO Ubiquitin ac 95.1 0.32 6.8E-06 41.3 10.5 99 95-197 17-148 (197)
466 PRK04308 murD UDP-N-acetylmura 95.1 0.19 4E-06 46.9 9.9 81 99-185 5-93 (445)
467 TIGR03026 NDP-sugDHase nucleot 95.1 0.027 5.9E-07 52.3 4.3 70 100-170 1-83 (411)
468 PRK07531 bifunctional 3-hydrox 95.0 0.066 1.4E-06 51.3 6.8 71 99-170 4-87 (495)
469 cd05276 p53_inducible_oxidored 95.0 0.085 1.8E-06 44.4 6.8 72 98-170 139-215 (323)
470 PRK13302 putative L-aspartate 95.0 0.056 1.2E-06 48.0 5.9 85 99-191 6-98 (271)
471 cd00650 LDH_MDH_like NAD-depen 95.0 0.025 5.4E-07 49.3 3.6 69 102-170 1-77 (263)
472 PTZ00075 Adenosylhomocysteinas 95.0 0.086 1.9E-06 51.1 7.5 66 96-170 251-316 (476)
473 TIGR00936 ahcY adenosylhomocys 95.0 0.076 1.6E-06 50.4 7.0 65 97-170 193-257 (406)
474 PRK10754 quinone oxidoreductas 95.0 0.32 6.9E-06 42.3 10.4 93 98-192 140-240 (327)
475 PRK00141 murD UDP-N-acetylmura 94.9 0.15 3.2E-06 48.4 9.0 84 96-185 12-100 (473)
476 COG1064 AdhP Zn-dependent alco 94.9 0.096 2.1E-06 48.7 7.5 94 96-193 164-261 (339)
477 cd00757 ThiF_MoeB_HesA_family 94.9 0.45 9.7E-06 40.8 11.2 99 96-197 18-149 (228)
478 PTZ00354 alcohol dehydrogenase 94.9 0.12 2.6E-06 44.5 7.7 72 98-170 140-217 (334)
479 PRK07679 pyrroline-5-carboxyla 94.9 0.064 1.4E-06 47.1 6.0 63 100-170 4-72 (279)
480 TIGR01759 MalateDH-SF1 malate 94.9 0.058 1.3E-06 49.4 6.0 70 100-170 4-86 (323)
481 PRK12921 2-dehydropantoate 2-r 94.9 0.16 3.4E-06 44.4 8.4 69 100-170 1-75 (305)
482 PRK05690 molybdopterin biosynt 94.9 0.47 1E-05 41.5 11.4 96 96-194 29-157 (245)
483 cd08268 MDR2 Medium chain dehy 94.9 0.097 2.1E-06 44.4 6.9 73 98-170 144-220 (328)
484 PRK15469 ghrA bifunctional gly 94.9 0.097 2.1E-06 47.6 7.3 64 97-170 134-197 (312)
485 PRK06444 prephenate dehydrogen 94.9 0.052 1.1E-06 46.6 5.2 28 100-127 1-28 (197)
486 PLN02178 cinnamyl-alcohol dehy 94.9 0.16 3.4E-06 46.5 8.7 91 98-192 178-274 (375)
487 PRK05442 malate dehydrogenase; 94.8 0.084 1.8E-06 48.4 6.7 65 99-170 4-87 (326)
488 PLN02827 Alcohol dehydrogenase 94.8 0.28 6E-06 44.8 10.1 92 98-192 193-296 (378)
489 cd05282 ETR_like 2-enoyl thioe 94.8 0.14 2.9E-06 44.0 7.6 95 97-193 137-239 (323)
490 PRK08818 prephenate dehydrogen 94.8 0.077 1.7E-06 49.6 6.4 55 98-170 3-58 (370)
491 PLN02586 probable cinnamyl alc 94.8 0.19 4.2E-06 45.4 8.9 91 98-192 183-279 (360)
492 cd00401 AdoHcyase S-adenosyl-L 94.8 0.11 2.3E-06 49.5 7.4 65 97-170 200-264 (413)
493 COG2084 MmsB 3-hydroxyisobutyr 94.7 0.058 1.3E-06 49.0 5.4 62 101-170 2-64 (286)
494 TIGR02824 quinone_pig3 putativ 94.7 0.13 2.9E-06 43.5 7.3 93 98-193 139-240 (325)
495 PRK06545 prephenate dehydrogen 94.7 0.054 1.2E-06 49.6 5.3 66 101-170 2-67 (359)
496 PRK09880 L-idonate 5-dehydroge 94.7 0.12 2.6E-06 46.0 7.3 91 98-192 169-267 (343)
497 PRK13403 ketol-acid reductoiso 94.7 0.096 2.1E-06 48.7 6.9 68 94-170 11-78 (335)
498 cd08238 sorbose_phosphate_red 94.7 0.088 1.9E-06 48.4 6.7 73 98-170 175-264 (410)
499 PLN02928 oxidoreductase family 94.7 0.099 2.2E-06 48.1 6.9 74 96-170 156-233 (347)
500 TIGR01809 Shik-DH-AROM shikima 94.7 0.049 1.1E-06 48.5 4.8 70 98-170 124-197 (282)
No 1
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.83 E-value=2.1e-20 Score=170.11 Aligned_cols=102 Identities=16% Similarity=0.220 Sum_probs=87.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch------hhh--cCCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------MES--FGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a------~~~--~~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
.+++|+|||||||||++||++||.+||.||+.+|+++.. ..+ ......++.+|++|++++.+|++|||.|||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 578999999999999999999999999999999999862 222 124488999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhCC-CCEEEEecccccccCC
Q 028418 170 PS-------------------EGF--ISNAGSLKG-VQHVILLSQRQRWHSS 199 (209)
Q Consensus 170 ~a-------------------~g~--ll~AA~~aG-VkriV~vSS~~Vyg~~ 199 (209)
++ .|+ ++++|++.. ||||||+||.++....
T Consensus 85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~ 136 (327)
T KOG1502|consen 85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYN 136 (327)
T ss_pred eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccC
Confidence 83 133 899999888 9999999998776543
No 2
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.83 E-value=3e-20 Score=163.68 Aligned_cols=97 Identities=22% Similarity=0.271 Sum_probs=84.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (209)
|+|||||||||||++|+++|+++||+|++++|++++.......+++++.+|++|++++.++++|+|+|||+.
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 589999999999999999999999999999999866543333579999999999999999999999999981
Q ss_pred -------hh--HHHHHHHhCCCCEEEEecccccc
Q 028418 172 -------EG--FISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 172 -------~g--~ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.+ .+++||+++||+||||+||.+++
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~ 114 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAE 114 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEecccccc
Confidence 12 28899999999999999997553
No 3
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.82 E-value=1.5e-19 Score=145.48 Aligned_cols=99 Identities=24% Similarity=0.354 Sum_probs=90.3
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC---------h
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---------E 172 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---------~ 172 (209)
|+|+||||++|+.|+++|+++|++|++++|++++... ..+++++.+|+.|++++.++++|+|+||++. .
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~~ 78 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDAA 78 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhhhccccccc
Confidence 7999999999999999999999999999999988765 6789999999999999999999999999982 1
Q ss_pred hHHHHHHHhCCCCEEEEecccccccCCCCc
Q 028418 173 GFISNAGSLKGVQHVILLSQRQRWHSSSNE 202 (209)
Q Consensus 173 g~ll~AA~~aGVkriV~vSS~~Vyg~~~~l 202 (209)
..++++|+++|++|+|++|+.++|+....+
T Consensus 79 ~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~ 108 (183)
T PF13460_consen 79 KNIIEAAKKAGVKRVVYLSSAGVYRDPPGL 108 (183)
T ss_dssp HHHHHHHHHTTSSEEEEEEETTGTTTCTSE
T ss_pred ccccccccccccccceeeeccccCCCCCcc
Confidence 238999999999999999999999976653
No 4
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.82 E-value=5.6e-20 Score=162.10 Aligned_cols=96 Identities=21% Similarity=0.327 Sum_probs=82.3
Q ss_pred EEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchh--hhcCCc-eEEEEccCCCHHHHHHhhcCCcEEEEcC------
Q 028418 103 LVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFGTY-VESMAGDASNKKFLKTALRGVRSIICPS------ 171 (209)
Q Consensus 103 LVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~--~~~~~~-vevv~GDl~D~~sL~~AL~GvDaVIh~a------ 171 (209)
|||||+||+|+|||++|+++| ++||+++|.+.... .....+ .+++.+|++|++++.+||+|||+|||++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 799999999999999999999 89999998775432 122222 3499999999999999999999999992
Q ss_pred -------------hhH--HHHHHHhCCCCEEEEecccccccC
Q 028418 172 -------------EGF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 172 -------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.|+ ++++|++++|+||||+||.+|++.
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~ 122 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFD 122 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEe
Confidence 233 899999999999999999999886
No 5
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.78 E-value=9.2e-19 Score=150.74 Aligned_cols=96 Identities=13% Similarity=0.117 Sum_probs=83.2
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh------cC-CcEEEEcC--
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL------RG-VRSIICPS-- 171 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL------~G-vDaVIh~a-- 171 (209)
+||||||||+||++++++|+++|++|++++|++++.. ..+++.+.+|++|++++.+|+ +| +|+|||+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~ 77 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP 77 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence 5999999999999999999999999999999997653 246888999999999999999 68 99999872
Q ss_pred -------hhHHHHHHHhCCCCEEEEecccccccCC
Q 028418 172 -------EGFISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 -------~g~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
...++++|+++||+||||+||.+++...
T Consensus 78 ~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~ 112 (285)
T TIGR03649 78 IPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKGG 112 (285)
T ss_pred CCChhHHHHHHHHHHHHcCCCEEEEeeccccCCCC
Confidence 1138999999999999999998765443
No 6
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.78 E-value=1.9e-18 Score=154.26 Aligned_cols=104 Identities=14% Similarity=0.105 Sum_probs=86.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh----h-------cCCceEEEEccCCCHHHHHHhhcCCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S-------FGTYVESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~----~-------~~~~vevv~GDl~D~~sL~~AL~GvD 165 (209)
-.+++|||||||||||++|+++|+++|++|++++|....... . ....++++.+|+.|++.+.++++++|
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d 92 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD 92 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence 345799999999999999999999999999999985532110 0 01247889999999999999999999
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 166 SIICPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|||++ .|+ ++++|++.+++||||+||..||+...
T Consensus 93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~ 149 (348)
T PRK15181 93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHP 149 (348)
T ss_pred EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCC
Confidence 999992 122 78999999999999999999998654
No 7
>PLN02427 UDP-apiose/xylose synthase
Probab=99.77 E-value=2e-18 Score=155.55 Aligned_cols=99 Identities=10% Similarity=0.057 Sum_probs=83.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhcCCcEEEEcC
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a 171 (209)
|+|||||||||||++|+++|+++ |++|++++|+.++.... +..+++++.+|++|++.+.++++++|+|||++
T Consensus 15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViHlA 94 (386)
T PLN02427 15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTINLA 94 (386)
T ss_pred cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEEcc
Confidence 58999999999999999999998 59999999876543322 12368999999999999999999999999982
Q ss_pred -h-------------------hH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 -E-------------------GF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 -~-------------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
. ++ ++++|++.+ +||||+||..+||..
T Consensus 95 a~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~ 143 (386)
T PLN02427 95 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKT 143 (386)
T ss_pred cccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCC
Confidence 0 11 678888887 999999999999864
No 8
>PLN02214 cinnamoyl-CoA reductase
Probab=99.77 E-value=3.2e-18 Score=152.95 Aligned_cols=106 Identities=19% Similarity=0.238 Sum_probs=87.9
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-----hhc--CCceEEEEccCCCHHHHHHhhcCCcE
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESF--GTYVESMAGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-----~~~--~~~vevv~GDl~D~~sL~~AL~GvDa 166 (209)
+....+++|||||||||||++|+++|+++|++|++++|+.+... ... ...++++.+|++|++.+.++++++|+
T Consensus 5 ~~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 84 (342)
T PLN02214 5 VASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDG 84 (342)
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCE
Confidence 44556789999999999999999999999999999999875421 111 13588999999999999999999999
Q ss_pred EEEcC---------------hhH--HHHHHHhCCCCEEEEeccc-ccccCC
Q 028418 167 IICPS---------------EGF--ISNAGSLKGVQHVILLSQR-QRWHSS 199 (209)
Q Consensus 167 VIh~a---------------~g~--ll~AA~~aGVkriV~vSS~-~Vyg~~ 199 (209)
|||++ .++ ++++|++++++||||+||. ++|+..
T Consensus 85 Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~ 135 (342)
T PLN02214 85 VFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDP 135 (342)
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccC
Confidence 99992 122 7899999999999999996 588753
No 9
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.74 E-value=1.6e-17 Score=144.25 Aligned_cols=98 Identities=14% Similarity=0.220 Sum_probs=81.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hh--c---CCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES--F---GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~--~---~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
..++|||||||||||++++++|+++|++|++++|+..... .. . ..+++++.+|++|++.+.++++++|+|||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 3578999999999999999999999999999999875421 11 1 23689999999999999999999999999
Q ss_pred cC----------h---------hH--HHHHHHhC-CCCEEEEeccccc
Q 028418 170 PS----------E---------GF--ISNAGSLK-GVQHVILLSQRQR 195 (209)
Q Consensus 170 ~a----------~---------g~--ll~AA~~a-GVkriV~vSS~~V 195 (209)
++ . ++ ++++|++. +++||||+||.++
T Consensus 83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~ 130 (322)
T PLN02662 83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAA 130 (322)
T ss_pred eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHH
Confidence 82 0 11 67888877 9999999999874
No 10
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.74 E-value=3.5e-17 Score=139.31 Aligned_cols=105 Identities=22% Similarity=0.308 Sum_probs=88.0
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCC-HHHHHHhh-cCCcEEEEc
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASN-KKFLKTAL-RGVRSIICP 170 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D-~~sL~~AL-~GvDaVIh~ 170 (209)
++..+++||||||||+||++++++|+++||+|++++|++++..... ..+++++.+|++| ...+.+++ .++|+||++
T Consensus 13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~ 92 (251)
T PLN00141 13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICA 92 (251)
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEEC
Confidence 4555789999999999999999999999999999999987654332 2358999999998 57888888 799999988
Q ss_pred C---h-------------hH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 171 S---E-------------GF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 171 a---~-------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
. . ++ +++++++.+++||||+||.++|+..
T Consensus 93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~ 139 (251)
T PLN00141 93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAA 139 (251)
T ss_pred CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCC
Confidence 1 0 22 7889999999999999999998753
No 11
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.74 E-value=2.2e-17 Score=146.45 Aligned_cols=101 Identities=14% Similarity=0.194 Sum_probs=83.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhcC-CceEEEEccCC-CHHHHHHhhcCCcEEEEcC----
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDAS-NKKFLKTALRGVRSIICPS---- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~~-~~vevv~GDl~-D~~sL~~AL~GvDaVIh~a---- 171 (209)
+|+|||||||||||++|+++|+++ |++|++++|+..+.....+ .+++++.+|++ |++.+.++++++|+|||++
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~ 80 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIAT 80 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCC
Confidence 468999999999999999999986 6999999987654433322 46899999997 7888999999999999982
Q ss_pred ----------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 ----------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 ----------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.++ ++++|++.+ +||||+||..+|+...
T Consensus 81 ~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~ 126 (347)
T PRK11908 81 PATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCP 126 (347)
T ss_pred hHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCC
Confidence 012 689999888 8999999999998643
No 12
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.73 E-value=3.1e-17 Score=148.65 Aligned_cols=109 Identities=16% Similarity=0.079 Sum_probs=88.3
Q ss_pred cCCccccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 90 KEDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 90 ~~~~~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
.+++|.. .+|+|||||||||||+++++.|+++||+|++++|............++++.+|++|.+.+.++++++|+|||
T Consensus 13 ~~~~~~~-~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih 91 (370)
T PLN02695 13 REPYWPS-EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFN 91 (370)
T ss_pred CCCCCCC-CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEE
Confidence 3445554 446899999999999999999999999999999865332111112368899999999999999999999999
Q ss_pred cC-h--------------------h--HHHHHHHhCCCCEEEEecccccccCC
Q 028418 170 PS-E--------------------G--FISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 170 ~a-~--------------------g--~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ . + .++++|++.++++|||+||..+|+..
T Consensus 92 ~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~ 144 (370)
T PLN02695 92 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEF 144 (370)
T ss_pred cccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCc
Confidence 92 0 1 17899999999999999999999864
No 13
>PLN02650 dihydroflavonol-4-reductase
Probab=99.73 E-value=2.4e-17 Score=146.42 Aligned_cols=101 Identities=20% Similarity=0.308 Sum_probs=83.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hc-----CCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF-----GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~-----~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
..++|||||||||||++++++|+++|++|++++|++..... .. ...++++.+|++|++.+.++++++|+|||
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 35689999999999999999999999999999998754321 11 12478999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhCC-CCEEEEecccccccC
Q 028418 170 PS-------------------EGF--ISNAGSLKG-VQHVILLSQRQRWHS 198 (209)
Q Consensus 170 ~a-------------------~g~--ll~AA~~aG-VkriV~vSS~~Vyg~ 198 (209)
++ .++ ++++|.+.+ ++||||+||.++|+.
T Consensus 84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~ 134 (351)
T PLN02650 84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNV 134 (351)
T ss_pred eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhccc
Confidence 82 022 788898877 899999999977654
No 14
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.73 E-value=3.3e-17 Score=143.38 Aligned_cols=99 Identities=19% Similarity=0.262 Sum_probs=82.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhc-----CCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESF-----GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~-----~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
..++|||||||||||++++++|+++|++|++++|+..+.. ... ...++++.+|++|++.+.++++++|+|||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 4579999999999999999999999999999999876432 111 23589999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhC-CCCEEEEecccccc
Q 028418 170 PS-------------------EGF--ISNAGSLK-GVQHVILLSQRQRW 196 (209)
Q Consensus 170 ~a-------------------~g~--ll~AA~~a-GVkriV~vSS~~Vy 196 (209)
++ .++ ++++|++. +++||||+||.+++
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~ 132 (322)
T PLN02986 84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAV 132 (322)
T ss_pred eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhhe
Confidence 92 011 67888875 89999999998764
No 15
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.72 E-value=4e-17 Score=144.54 Aligned_cols=101 Identities=14% Similarity=0.145 Sum_probs=83.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-----hhhhc-------CCceEEEEccCCCHHHHHHhhcC--Cc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF-------GTYVESMAGDASNKKFLKTALRG--VR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-----a~~~~-------~~~vevv~GDl~D~~sL~~AL~G--vD 165 (209)
++|||||||||||++|+++|+++|++|++++|++.. ..... +.+++++.+|++|++.+.+++++ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 489999999999999999999999999999997642 11111 23589999999999999999985 59
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCCC---EEEEecccccccCCC
Q 028418 166 SIICPS--------------------EGF--ISNAGSLKGVQ---HVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a--------------------~g~--ll~AA~~aGVk---riV~vSS~~Vyg~~~ 200 (209)
+|||++ .|+ ++++|++.+++ ||||+||..+||...
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~ 140 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQ 140 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCC
Confidence 999992 022 78899988875 899999999998653
No 16
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.72 E-value=5.5e-17 Score=139.98 Aligned_cols=99 Identities=25% Similarity=0.327 Sum_probs=86.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (209)
++||||||+||||+++++.|+++|++|+++.|++++.......+++++.+|++|++.+.++++++|+|||++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~ 80 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAP 80 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCCC
Confidence 479999999999999999999999999999998776543333468999999999999999999999999982
Q ss_pred ----------hhH--HHHHHHhCCCCEEEEecccccccC
Q 028418 172 ----------EGF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 172 ----------~g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.++ ++++|++.+++||||+||..+|+.
T Consensus 81 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~ 119 (328)
T TIGR03466 81 DPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGV 119 (328)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCc
Confidence 011 688899999999999999999985
No 17
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.71 E-value=4.8e-17 Score=147.25 Aligned_cols=103 Identities=17% Similarity=0.224 Sum_probs=86.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCc-eEEEEccCCCHHHHHHhhc--CCcEEEEcC-----
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTY-VESMAGDASNKKFLKTALR--GVRSIICPS----- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~-vevv~GDl~D~~sL~~AL~--GvDaVIh~a----- 171 (209)
|+|||||++|+||+|.|.+|+++|++|++++.-...-.+..... +++++||+.|.+.|.+.|+ .+|+|||.+
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V 80 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV 80 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccccc
Confidence 58999999999999999999999999999995332222222222 6899999999999999996 689999982
Q ss_pred ---------------hhH--HHHHHHhCCCCEEEEecccccccCCCCc
Q 028418 172 ---------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSSNE 202 (209)
Q Consensus 172 ---------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~~l 202 (209)
.|+ |+++|+++||++|||.||..|||.+...
T Consensus 81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~ 128 (329)
T COG1087 81 GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTS 128 (329)
T ss_pred chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCc
Confidence 133 8999999999999999999999998764
No 18
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.71 E-value=6.9e-17 Score=142.49 Aligned_cols=102 Identities=18% Similarity=0.274 Sum_probs=84.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-----hcC--CceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----SFG--TYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-----~~~--~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
..+++|||||||||||++|+++|+++|++|++++|+...... .+. .+++++.+|++|++.+.++++++|+|||
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 86 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH 86 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence 346789999999999999999999999999999998754211 111 2588999999999999999999999999
Q ss_pred cC-------h------------hH--HHHHHHhC-CCCEEEEecccccccC
Q 028418 170 PS-------E------------GF--ISNAGSLK-GVQHVILLSQRQRWHS 198 (209)
Q Consensus 170 ~a-------~------------g~--ll~AA~~a-GVkriV~vSS~~Vyg~ 198 (209)
++ . ++ ++++|.+. +++||||+||.++|+.
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~ 137 (338)
T PLN00198 87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSI 137 (338)
T ss_pred eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeec
Confidence 92 0 11 67887775 6999999999999974
No 19
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.71 E-value=5.1e-17 Score=136.40 Aligned_cols=96 Identities=23% Similarity=0.330 Sum_probs=79.2
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch--hhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C---h---
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--MESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S---E--- 172 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a--~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a---~--- 172 (209)
|||+||||.+|++|++.|+..+++|++++|++.+. ..+...+++++.+|+.|+++|.+||+|+|+||++ . .
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~ 80 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSEL 80 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCHH
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhhh
Confidence 79999999999999999999999999999998542 2333356899999999999999999999999988 2 1
Q ss_pred ---hHHHHHHHhCCCCEEEEeccccccc
Q 028418 173 ---GFISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 173 ---g~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
-.+++||+++||+|||+.|....+.
T Consensus 81 ~~~~~li~Aa~~agVk~~v~ss~~~~~~ 108 (233)
T PF05368_consen 81 EQQKNLIDAAKAAGVKHFVPSSFGADYD 108 (233)
T ss_dssp HHHHHHHHHHHHHT-SEEEESEESSGTT
T ss_pred hhhhhHHHhhhccccceEEEEEeccccc
Confidence 1289999999999999877666663
No 20
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.71 E-value=8.6e-17 Score=137.65 Aligned_cols=98 Identities=18% Similarity=0.241 Sum_probs=85.1
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCC-cEEEEcC--------
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV-RSIICPS-------- 171 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~Gv-DaVIh~a-------- 171 (209)
+|||||||||||++|+++|+++||+|+++.|...+..... ..++++.+|++|.+.+.+++.++ |+|||++
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~~ 80 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDS 80 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-cccceeeecccchHHHHHHHhcCCCEEEEccccCchhhh
Confidence 4999999999999999999999999999999887654433 56899999999999999999999 9999992
Q ss_pred -h-----h-------H--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 -E-----G-------F--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 -~-----g-------~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
. . + ++++|++.+++||||.||.++++..
T Consensus 81 ~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~ 123 (314)
T COG0451 81 NASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGD 123 (314)
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCC
Confidence 1 0 1 7889999999999998888877765
No 21
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.70 E-value=1.5e-16 Score=141.63 Aligned_cols=104 Identities=16% Similarity=0.255 Sum_probs=85.5
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-----CCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-----~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+...++|||||||||||++++++|+++|++|++++|++.+..... ...++++.+|++|++.+.++++++|+|||+
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV 86 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence 334568999999999999999999999999999999876543211 245889999999999999999999999999
Q ss_pred C------h---------------------hH--HHHHHHhCC-CCEEEEecccccccCC
Q 028418 171 S------E---------------------GF--ISNAGSLKG-VQHVILLSQRQRWHSS 199 (209)
Q Consensus 171 a------~---------------------g~--ll~AA~~aG-VkriV~vSS~~Vyg~~ 199 (209)
+ . ++ ++++|++++ +++|||+||.++|+..
T Consensus 87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~ 145 (353)
T PLN02896 87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAK 145 (353)
T ss_pred CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhcccc
Confidence 2 0 11 567887764 9999999999999853
No 22
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.69 E-value=1.5e-16 Score=154.38 Aligned_cols=104 Identities=14% Similarity=0.127 Sum_probs=85.6
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhcC-CceEEEEccCCCHHH-HHHhhcCCcEEEEcC
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDASNKKF-LKTALRGVRSIICPS 171 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~~s-L~~AL~GvDaVIh~a 171 (209)
...++++|||||||||||+||+++|+++ ||+|++++|++........ .+++++.+|++|+.. +.++++++|+|||++
T Consensus 311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlA 390 (660)
T PRK08125 311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLV 390 (660)
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECc
Confidence 4567889999999999999999999986 7999999997754332222 368999999999765 678899999999982
Q ss_pred --------------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 --------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 --------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.++ ++++|++++ +||||+||..+||..
T Consensus 391 a~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~ 439 (660)
T PRK08125 391 AIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMC 439 (660)
T ss_pred cccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCC
Confidence 012 789999998 899999999999854
No 23
>PLN02583 cinnamoyl-CoA reductase
Probab=99.68 E-value=3.4e-16 Score=137.00 Aligned_cols=100 Identities=15% Similarity=0.197 Sum_probs=81.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch------hhh--cCCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------MES--FGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a------~~~--~~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
++++|||||||||||++|+++|+++||+|++++|+..+. ... .+.+++++.+|++|++.+.+++.++|+|+|
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~ 84 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC 84 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 357899999999999999999999999999999964321 111 123588999999999999999999999998
Q ss_pred cC------------------hhH--HHHHHHhC-CCCEEEEeccccccc
Q 028418 170 PS------------------EGF--ISNAGSLK-GVQHVILLSQRQRWH 197 (209)
Q Consensus 170 ~a------------------~g~--ll~AA~~a-GVkriV~vSS~~Vyg 197 (209)
+. .++ ++++|.+. +++|||++||.+++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~ 133 (297)
T PLN02583 85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVI 133 (297)
T ss_pred eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHhee
Confidence 61 122 78888775 799999999987653
No 24
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.68 E-value=3.5e-16 Score=145.88 Aligned_cols=104 Identities=19% Similarity=0.215 Sum_probs=83.2
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-----------------h------hhcCCceEEEEccCC
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----------------M------ESFGTYVESMAGDAS 152 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-----------------~------~~~~~~vevv~GDl~ 152 (209)
...+++|||||||||||+||+++|+++|++|++++|..... . .....+++++.+|++
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 123 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC 123 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence 34467899999999999999999999999999987422110 0 001235899999999
Q ss_pred CHHHHHHhhc--CCcEEEEcC-----------------------hhH--HHHHHHhCCCC-EEEEecccccccCC
Q 028418 153 NKKFLKTALR--GVRSIICPS-----------------------EGF--ISNAGSLKGVQ-HVILLSQRQRWHSS 199 (209)
Q Consensus 153 D~~sL~~AL~--GvDaVIh~a-----------------------~g~--ll~AA~~aGVk-riV~vSS~~Vyg~~ 199 (209)
|++.+.++++ ++|+|||++ .|+ ++++|++.|++ ||||+||..+||..
T Consensus 124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~ 198 (442)
T PLN02572 124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTP 198 (442)
T ss_pred CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCC
Confidence 9999999998 489999983 011 68899999996 99999999999864
No 25
>PLN02686 cinnamoyl-CoA reductase
Probab=99.68 E-value=2.2e-16 Score=143.02 Aligned_cols=104 Identities=15% Similarity=0.222 Sum_probs=84.6
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--c---------CCceEEEEccCCCHHHHHHhhcC
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--F---------GTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--~---------~~~vevv~GDl~D~~sL~~AL~G 163 (209)
....+++|||||||||||++++++|+++|++|++++|+.+..... . ...++++.+|++|++.+.+++++
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~ 128 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG 128 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence 345577999999999999999999999999999999986543211 0 12478999999999999999999
Q ss_pred CcEEEEcC-----h---------------hH--HHHHHHhC-CCCEEEEeccc--ccccC
Q 028418 164 VRSIICPS-----E---------------GF--ISNAGSLK-GVQHVILLSQR--QRWHS 198 (209)
Q Consensus 164 vDaVIh~a-----~---------------g~--ll~AA~~a-GVkriV~vSS~--~Vyg~ 198 (209)
+|+|||++ . ++ ++++|++. +|+||||+||. .+|+.
T Consensus 129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~ 188 (367)
T PLN02686 129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQ 188 (367)
T ss_pred ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccc
Confidence 99999982 0 11 78999876 89999999996 46653
No 26
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.67 E-value=5.3e-16 Score=142.26 Aligned_cols=103 Identities=22% Similarity=0.264 Sum_probs=85.9
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh--------hhcCCceEEEEccCCCHHHHHHhhc----C
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--------ESFGTYVESMAGDASNKKFLKTALR----G 163 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~--------~~~~~~vevv~GDl~D~~sL~~AL~----G 163 (209)
...+++|||||||||||++++++|+++|++|++++|++.+.. .....+++++.+|++|++++.++++ +
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 344568999999999999999999999999999999875431 0112468999999999999999998 5
Q ss_pred CcEEEEc-C--------------hh--HHHHHHHhCCCCEEEEecccccccC
Q 028418 164 VRSIICP-S--------------EG--FISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 164 vDaVIh~-a--------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
+|+|||+ + .+ .++++|++.|++||||+||..+++.
T Consensus 137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p 188 (390)
T PLN02657 137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKP 188 (390)
T ss_pred CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCc
Confidence 9999997 1 01 2789999999999999999988754
No 27
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.66 E-value=3.9e-16 Score=128.47 Aligned_cols=98 Identities=22% Similarity=0.287 Sum_probs=84.9
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHHHhhcCC--cEEEEc-Ch-----
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGV--RSIICP-SE----- 172 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~~AL~Gv--DaVIh~-a~----- 172 (209)
|||||||||||++++++|+++|+.|+++.|+....... ...+++++.+|+.|++.+.+++++. |+|||+ +.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE 80 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence 79999999999999999999999999999988665321 1126899999999999999999977 999998 20
Q ss_pred --------------h--HHHHHHHhCCCCEEEEecccccccCC
Q 028418 173 --------------G--FISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 173 --------------g--~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+ .++++|++.+++|+||+||..+|+..
T Consensus 81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~ 123 (236)
T PF01370_consen 81 SFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDP 123 (236)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc
Confidence 0 17889999999999999999999988
No 28
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.65 E-value=1.3e-15 Score=133.11 Aligned_cols=100 Identities=18% Similarity=0.247 Sum_probs=82.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hc-----CCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF-----GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~-----~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++||||||+||||++++++|+++|++|++++|++..... .. ..+++++.+|++|++.+.++++++|+|||+
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~ 84 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHT 84 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEe
Confidence 5799999999999999999999999999999998764321 11 135889999999999999999999999998
Q ss_pred C--------------------hhH--HHHHHHhC-CCCEEEEecccccccC
Q 028418 171 S--------------------EGF--ISNAGSLK-GVQHVILLSQRQRWHS 198 (209)
Q Consensus 171 a--------------------~g~--ll~AA~~a-GVkriV~vSS~~Vyg~ 198 (209)
+ .++ ++++|.+. ++++||++||.++|+.
T Consensus 85 A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~ 135 (325)
T PLN02989 85 ASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLA 135 (325)
T ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheec
Confidence 2 011 67777764 6899999999887754
No 29
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.64 E-value=1.7e-15 Score=132.60 Aligned_cols=100 Identities=21% Similarity=0.229 Sum_probs=81.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------hhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~ 170 (209)
|+|||||||||||++|+++|+++|++|+++.|...... ...+..++++.+|++|++.+.++++ ++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 57999999999999999999999999999986433211 1112346789999999999999987 68999998
Q ss_pred C----h----------------hH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 171 S----E----------------GF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 171 a----~----------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+ . ++ ++++|++.++++|||+||.++|+..
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~ 131 (338)
T PRK10675 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQ 131 (338)
T ss_pred CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCC
Confidence 2 0 11 6888999999999999999999754
No 30
>PLN00016 RNA-binding protein; Provisional
Probab=99.64 E-value=5e-16 Score=140.35 Aligned_cols=102 Identities=16% Similarity=0.219 Sum_probs=81.8
Q ss_pred CCCeEEEE----cCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-----------hcCCceEEEEccCCCHHHHHHhhc
Q 028418 98 ARDAVLVT----DGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----------SFGTYVESMAGDASNKKFLKTALR 162 (209)
Q Consensus 98 ~~~~ILVT----GATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-----------~~~~~vevv~GDl~D~~sL~~AL~ 162 (209)
.+++|||| |||||||++|+++|+++||+|++++|++..... ....+++++.+|+.|.+.+. +..
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~~~ 129 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-AGA 129 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-ccC
Confidence 34689999 999999999999999999999999998764221 11235899999998843332 336
Q ss_pred CCcEEEEcC----hh--HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 163 GVRSIICPS----EG--FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 GvDaVIh~a----~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++|+|||+. .+ .++++|+++||+||||+||.++|+...
T Consensus 130 ~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~ 173 (378)
T PLN00016 130 GFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSD 173 (378)
T ss_pred CccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCC
Confidence 899999982 22 389999999999999999999998653
No 31
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.64 E-value=1.1e-15 Score=134.23 Aligned_cols=88 Identities=18% Similarity=0.192 Sum_probs=74.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS------ 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a------ 171 (209)
|+||||||+||||++|+++|+++| +|++++|... .+.+|++|++.+.++++ ++|+|||++
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~ 68 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVD 68 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCcc
Confidence 589999999999999999999999 7999987532 35689999999999998 589999992
Q ss_pred --------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 --------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 --------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.++ ++++|++.|+ ++||+||..||+...
T Consensus 69 ~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~ 112 (299)
T PRK09987 69 KAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTG 112 (299)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCC
Confidence 012 7899999996 799999999997653
No 32
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.64 E-value=1.7e-15 Score=133.74 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=84.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-----hhhh------cCCceEEEEccCCCHHHHHHhhcC--C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES------FGTYVESMAGDASNKKFLKTALRG--V 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-----a~~~------~~~~vevv~GDl~D~~sL~~AL~G--v 164 (209)
.+++|||||||||||++++++|+++|++|+++.|++.. .... .+.+++++.+|++|.+.+.++++. +
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 84 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP 84 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence 35789999999999999999999999999999987542 1111 123588999999999999999985 5
Q ss_pred cEEEEcC--------------------hhH--HHHHHHhCCCC-----EEEEecccccccCCC
Q 028418 165 RSIICPS--------------------EGF--ISNAGSLKGVQ-----HVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a--------------------~g~--ll~AA~~aGVk-----riV~vSS~~Vyg~~~ 200 (209)
|+|||++ .++ ++++|++.+++ +|||+||.++||...
T Consensus 85 d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~ 147 (340)
T PLN02653 85 DEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTP 147 (340)
T ss_pred CEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCC
Confidence 9999992 012 68889888886 899999999998753
No 33
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.63 E-value=3.2e-15 Score=132.25 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=78.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch---h---hh-cCCceEEEEccCCCHHHHHHhhcC--CcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA---M---ES-FGTYVESMAGDASNKKFLKTALRG--VRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a---~---~~-~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh 169 (209)
+++|||||||||||++++++|+++|++|+++.++..+. . .. ....++++.+|++|++.+.+++++ +|.|||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 46899999999999999999999999877665533211 1 11 113578899999999999999984 899999
Q ss_pred cC--------------------hhH--HHHHHHh---------CCCCEEEEecccccccCC
Q 028418 170 PS--------------------EGF--ISNAGSL---------KGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 170 ~a--------------------~g~--ll~AA~~---------aGVkriV~vSS~~Vyg~~ 199 (209)
++ .++ ++++|++ .++++|||+||.++|+..
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~ 141 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDL 141 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCC
Confidence 92 011 6788865 478999999999999853
No 34
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.62 E-value=3.4e-15 Score=132.72 Aligned_cols=101 Identities=18% Similarity=0.188 Sum_probs=83.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-----cCCceEEEEccCCCHHHHHHhhcC--CcEEEEcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRG--VRSIICPS 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-----~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~a 171 (209)
+++|||||||||||++++++|+++|++|++++|++...... ....++++.+|++|++.+.+++++ +|.|||++
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A 83 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA 83 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence 47899999999999999999999999999999977543211 123577899999999999999985 59999982
Q ss_pred --------------------hhH--HHHHHHhCC-CCEEEEecccccccCC
Q 028418 172 --------------------EGF--ISNAGSLKG-VQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 --------------------~g~--ll~AA~~aG-VkriV~vSS~~Vyg~~ 199 (209)
.++ ++++|++.+ +++|||+||..+|+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~ 134 (349)
T TIGR02622 84 AQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRND 134 (349)
T ss_pred cccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCC
Confidence 011 688888877 8999999999999753
No 35
>PLN02240 UDP-glucose 4-epimerase
Probab=99.62 E-value=4.8e-15 Score=130.49 Aligned_cols=101 Identities=17% Similarity=0.246 Sum_probs=82.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-------hhh---cCCceEEEEccCCCHHHHHHhhc--CCcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------MES---FGTYVESMAGDASNKKFLKTALR--GVRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-------~~~---~~~~vevv~GDl~D~~sL~~AL~--GvDa 166 (209)
+++|||||||||||++|+++|+++|++|++++|..... ... ...+++++.+|++|++.+.++++ ++|.
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~ 84 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDA 84 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCE
Confidence 57899999999999999999999999999998754221 111 12458899999999999999986 6899
Q ss_pred EEEcC-h-------------------h--HHHHHHHhCCCCEEEEecccccccCC
Q 028418 167 IICPS-E-------------------G--FISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 167 VIh~a-~-------------------g--~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
|||++ . + .++++|++.++++|||+||.++|+..
T Consensus 85 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~ 139 (352)
T PLN02240 85 VIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQP 139 (352)
T ss_pred EEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCC
Confidence 99982 0 1 17788999999999999999999754
No 36
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.61 E-value=4.1e-15 Score=125.05 Aligned_cols=99 Identities=24% Similarity=0.298 Sum_probs=85.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C--h----
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--E---- 172 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a--~---- 172 (209)
++||||||||++|++++++|+++|++|++++|+++++.... .+++++.+|+.++.++..+++|++.++++ . .
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~~~~ 79 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGSDA 79 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEecccccccc
Confidence 58999999999999999999999999999999999887666 78999999999999999999999999887 2 1
Q ss_pred --h----HHHHHHHhC--CCCEEEEecccccccCC
Q 028418 173 --G----FISNAGSLK--GVQHVILLSQRQRWHSS 199 (209)
Q Consensus 173 --g----~ll~AA~~a--GVkriV~vSS~~Vyg~~ 199 (209)
. .++++++++ ++++++++|...+...+
T Consensus 80 ~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~ 114 (275)
T COG0702 80 FRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAAS 114 (275)
T ss_pred hhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCC
Confidence 1 156666665 49999999999876533
No 37
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.60 E-value=4.9e-15 Score=138.58 Aligned_cols=96 Identities=17% Similarity=0.143 Sum_probs=76.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-----hcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----SFGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-----~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
..++|||||||||||++|+++|+++|++|++++|....... ....+++++.+|+.++ ++.++|+|||++
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHlAa 192 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHLAC 192 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEeee
Confidence 34789999999999999999999999999999875322111 1124588999999776 356899999982
Q ss_pred -------------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 -------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 -------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.++ ++++|++.|+ ||||+||..||+..
T Consensus 193 ~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~ 240 (442)
T PLN02206 193 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDP 240 (442)
T ss_pred ecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCC
Confidence 012 7899999996 89999999999864
No 38
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.59 E-value=5.9e-15 Score=140.63 Aligned_cols=99 Identities=14% Similarity=0.191 Sum_probs=80.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHH--HCCCcEEEEEeCCcchh--hh---cC-CceEEEEccCCCH------HHHHHhhcCCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNAM--ES---FG-TYVESMAGDASNK------KFLKTALRGVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll--~~G~~VraLvR~~~~a~--~~---~~-~~vevv~GDl~D~------~sL~~AL~GvD 165 (209)
|+|||||||||||++|+++|+ .+|++|++++|+..... .. ++ .+++++.+|++|+ +.+.++ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 589999999999999999999 58999999999764321 11 11 4689999999995 455555 9999
Q ss_pred EEEEcC-----------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 166 SIICPS-----------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 166 aVIh~a-----------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+|||++ .++ ++++|++.++++|||+||..+|+..
T Consensus 80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~ 132 (657)
T PRK07201 80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDY 132 (657)
T ss_pred EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCc
Confidence 999992 122 7899999999999999999998754
No 39
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.59 E-value=1.1e-14 Score=129.42 Aligned_cols=98 Identities=27% Similarity=0.433 Sum_probs=81.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchhh---hc-CCceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME---SF-GTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~~---~~-~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
.++|||||||||||++++++|+++| ++|++++|+..+... .. ...++++.+|++|++.+.++++++|+|||++
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag 83 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAAA 83 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECcc
Confidence 5789999999999999999999986 789999987654321 11 2358899999999999999999999999982
Q ss_pred -------------------hhH--HHHHHHhCCCCEEEEecccccc
Q 028418 172 -------------------EGF--ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 172 -------------------~g~--ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.++ ++++|++.+++||||+||....
T Consensus 84 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~ 129 (324)
T TIGR03589 84 LKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA 129 (324)
T ss_pred cCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC
Confidence 022 7889999999999999996543
No 40
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.59 E-value=5.4e-15 Score=138.12 Aligned_cols=97 Identities=18% Similarity=0.176 Sum_probs=76.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh----hhc-CCceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESF-GTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~----~~~-~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
+.++|||||||||||++|+++|+++|++|++++|...... ... ...++++.+|+.++ ++.++|+|||++
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlAa 193 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLAC 193 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECce
Confidence 3468999999999999999999999999999998542211 111 23578999999775 467899999992
Q ss_pred -------------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 -------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 -------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.++ ++++|++.++ ||||+||..||+...
T Consensus 194 ~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~ 242 (436)
T PLN02166 194 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPL 242 (436)
T ss_pred eccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCC
Confidence 012 7899999986 899999999998653
No 41
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.59 E-value=9.1e-15 Score=141.44 Aligned_cols=102 Identities=20% Similarity=0.254 Sum_probs=82.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC--CCcEEEEEeCC--cchhhh----cCCceEEEEccCCCHHHHHHhh--cCCcEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDK--RNAMES----FGTYVESMAGDASNKKFLKTAL--RGVRSII 168 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~--G~~VraLvR~~--~~a~~~----~~~~vevv~GDl~D~~sL~~AL--~GvDaVI 168 (209)
.++|||||||||||++|+++|+++ +++|++++|.. ...... ...+++++.+|++|++.+..++ .++|+||
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi 85 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM 85 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence 468999999999999999999998 68899988743 111111 1246899999999999988776 6899999
Q ss_pred EcC--------------------hhH--HHHHHHhCC-CCEEEEecccccccCCC
Q 028418 169 CPS--------------------EGF--ISNAGSLKG-VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 169 h~a--------------------~g~--ll~AA~~aG-VkriV~vSS~~Vyg~~~ 200 (209)
|++ .++ ++++|++.+ ++||||+||..+|+...
T Consensus 86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~ 140 (668)
T PLN02260 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETD 140 (668)
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCc
Confidence 992 011 788999887 99999999999998654
No 42
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.57 E-value=1.4e-14 Score=140.43 Aligned_cols=98 Identities=19% Similarity=0.265 Sum_probs=83.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc---------------CCceEEEEccCCCHHHHHHhhcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---------------GTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~---------------~~~vevv~GDl~D~~sL~~AL~G 163 (209)
.++||||||+|+||++++++|+++|++|++++|+.++..... ..+++++.+|++|.+.+.+++.+
T Consensus 80 gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLgg 159 (576)
T PLN03209 80 EDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALGN 159 (576)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhcC
Confidence 468999999999999999999999999999999987653211 12478999999999999999999
Q ss_pred CcEEEEcC--h----------------hH--HHHHHHhCCCCEEEEecccccc
Q 028418 164 VRSIICPS--E----------------GF--ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a--~----------------g~--ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+|+|||++ . ++ ++++|++.|++|||++||.+++
T Consensus 160 iDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~ 212 (576)
T PLN03209 160 ASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTN 212 (576)
T ss_pred CCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhc
Confidence 99999982 0 12 7888999999999999998774
No 43
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.57 E-value=1.5e-14 Score=125.43 Aligned_cols=99 Identities=17% Similarity=0.235 Sum_probs=80.0
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchh------hh----------cC-CceEEEEccCCCH------H
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM------ES----------FG-TYVESMAGDASNK------K 155 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~------~~----------~~-~~vevv~GDl~D~------~ 155 (209)
+|||||||||||++|+++|+++| ++|++++|++.... .. .. .+++++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999999 67999999876321 00 00 4689999999864 5
Q ss_pred HHHHhhcCCcEEEEcC-----------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 156 FLKTALRGVRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 156 sL~~AL~GvDaVIh~a-----------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.+..+.+++|+|||++ .++ ++++|.+.++++|||+||.++++..
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~ 143 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAI 143 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCc
Confidence 6777889999999982 112 7888999999999999999998763
No 44
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.57 E-value=2.2e-14 Score=122.64 Aligned_cols=100 Identities=14% Similarity=0.139 Sum_probs=78.6
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCc--c---hhhh-cCCceEEEEccCCCHHHHHHhhcC--CcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR--N---AMES-FGTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~--~---a~~~-~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~ 170 (209)
+|||||||||||++++++|+++| ++|+++.|... . .... ...+++++.+|++|++++.+++++ +|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 58999999999999999999987 78988876321 1 1111 123688999999999999999998 8999999
Q ss_pred C----h----------------hH--HHHHHHhCCCC-EEEEecccccccCCC
Q 028418 171 S----E----------------GF--ISNAGSLKGVQ-HVILLSQRQRWHSSS 200 (209)
Q Consensus 171 a----~----------------g~--ll~AA~~aGVk-riV~vSS~~Vyg~~~ 200 (209)
+ . ++ ++++|++.+++ ++||+||..+|+...
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~ 133 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLE 133 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCC
Confidence 2 0 11 67888887554 899999999998653
No 45
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.55 E-value=2.4e-14 Score=132.19 Aligned_cols=103 Identities=22% Similarity=0.288 Sum_probs=86.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcch--h-hh---cCCceEEEEccCCCHHHHHHhhcCCcEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA--M-ES---FGTYVESMAGDASNKKFLKTALRGVRSII 168 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a--~-~~---~~~~vevv~GDl~D~~sL~~AL~GvDaVI 168 (209)
..+.++|||||+||+|+|||++|++++ .+||+++..+... . .. ....++++.+|+.|...+..|++|+ .|+
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 356799999999999999999999988 8999999776421 1 11 1467899999999999999999999 777
Q ss_pred Ec-C-------------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 169 CP-S-------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 169 h~-a-------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|+ + .|+ ++++|++.||+++||+||..|..+..
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~ 134 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGE 134 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCe
Confidence 76 2 233 89999999999999999999876554
No 46
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.55 E-value=1.2e-14 Score=126.34 Aligned_cols=94 Identities=14% Similarity=0.146 Sum_probs=70.2
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH---HH-HHHhhc-----CCcEEEEcC
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KF-LKTALR-----GVRSIICPS 171 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~---~s-L~~AL~-----GvDaVIh~a 171 (209)
+|||||||||||+||+++|+++|++|++++|+....... ..++.+|+.|. +. +.++++ ++|+|||++
T Consensus 1 ~ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A 76 (308)
T PRK11150 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF----VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG 76 (308)
T ss_pred CEEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH----HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence 699999999999999999999999999988876542211 12334555554 33 344443 699999982
Q ss_pred ------------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 ------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 ------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.++ ++++|++.++ +|||+||..+|+..
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~ 123 (308)
T PRK11150 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGR 123 (308)
T ss_pred eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcC
Confidence 011 7899999998 69999999999875
No 47
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.53 E-value=5e-14 Score=124.49 Aligned_cols=99 Identities=15% Similarity=0.102 Sum_probs=75.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEE-EEeCCc--ch---hhhc-CCceEEEEccCCCHHHHHHhhc--CCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKR--NA---MESF-GTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~Vra-LvR~~~--~a---~~~~-~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~ 170 (209)
|+|||||||||||++|+++|+++|++++. +.|... .. .... ...++++.+|++|++++.++++ ++|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 47999999999999999999999987444 443221 11 1111 2347889999999999999997 48999999
Q ss_pred C--------------------hhH--HHHHHHhC---------CCCEEEEecccccccC
Q 028418 171 S--------------------EGF--ISNAGSLK---------GVQHVILLSQRQRWHS 198 (209)
Q Consensus 171 a--------------------~g~--ll~AA~~a---------GVkriV~vSS~~Vyg~ 198 (209)
+ .++ ++++|++. ++++|||+||..+|+.
T Consensus 81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~ 139 (352)
T PRK10084 81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGD 139 (352)
T ss_pred CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCC
Confidence 2 022 67888763 6789999999999985
No 48
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.53 E-value=3.6e-14 Score=129.52 Aligned_cols=103 Identities=17% Similarity=0.237 Sum_probs=86.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe---CC-c---chhhhcC--CceEEEEccCCCHHHHHHhhc--CCcEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---DK-R---NAMESFG--TYVESMAGDASNKKFLKTALR--GVRSII 168 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR---~~-~---~a~~~~~--~~vevv~GDl~D~~sL~~AL~--GvDaVI 168 (209)
.+||||||+||||+|.+.+|+++|+.|.+++- .- . +.....+ ..++++++|+.|.++|++.++ ..|+|+
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~ 82 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM 82 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence 58999999999999999999999999999982 11 1 2223344 679999999999999999997 569999
Q ss_pred EcC--------------------hhH--HHHHHHhCCCCEEEEecccccccCCCCc
Q 028418 169 CPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSSNE 202 (209)
Q Consensus 169 h~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~~l 202 (209)
|.+ .|+ ++++|++++++++||.||..|||.+..+
T Consensus 83 Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~i 138 (343)
T KOG1371|consen 83 HFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKV 138 (343)
T ss_pred eehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCccee
Confidence 982 123 8999999999999999999999988653
No 49
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.53 E-value=4.7e-14 Score=120.66 Aligned_cols=83 Identities=16% Similarity=0.307 Sum_probs=72.4
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCC--cEEEEcC----h--
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPS----E-- 172 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~Gv--DaVIh~a----~-- 172 (209)
+|||||||||||++++++|+++||+|++++|+ .+|+.|++.+.++++++ |+|||++ .
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 65 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDG 65 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------ccCCCCHHHHHHHHHhCCCCEEEECCccccccc
Confidence 58999999999999999999999999999985 47999999999999987 9999982 0
Q ss_pred --------------hH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 173 --------------GF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 173 --------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ ++++|++.++ ||||+||..+|+..
T Consensus 66 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~ 107 (287)
T TIGR01214 66 AESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGE 107 (287)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCC
Confidence 11 6778888886 89999999999763
No 50
>PLN02996 fatty acyl-CoA reductase
Probab=99.52 E-value=6.8e-14 Score=132.48 Aligned_cols=104 Identities=14% Similarity=0.216 Sum_probs=81.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC---cEEEEEeCCcch--h-----h-----hc---------------CCceEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNA--M-----E-----SF---------------GTYVES 146 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~---~VraLvR~~~~a--~-----~-----~~---------------~~~vev 146 (209)
-..++|||||||||+|++|+++|+..+. +|.+|+|+.... . . .+ ..++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 3467899999999999999999998653 579999976421 1 0 01 146899
Q ss_pred EEccCC-------CHHHHHHhhcCCcEEEEcC-----------------hhH--HHHHHHhC-CCCEEEEecccccccCC
Q 028418 147 MAGDAS-------NKKFLKTALRGVRSIICPS-----------------EGF--ISNAGSLK-GVQHVILLSQRQRWHSS 199 (209)
Q Consensus 147 v~GDl~-------D~~sL~~AL~GvDaVIh~a-----------------~g~--ll~AA~~a-GVkriV~vSS~~Vyg~~ 199 (209)
+.||++ |.+.+.++++++|+|||++ .|+ ++++|++. ++++|||+||..|||..
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~ 168 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEK 168 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCC
Confidence 999998 5566788899999999992 122 78899885 89999999999999875
Q ss_pred C
Q 028418 200 S 200 (209)
Q Consensus 200 ~ 200 (209)
.
T Consensus 169 ~ 169 (491)
T PLN02996 169 S 169 (491)
T ss_pred C
Confidence 4
No 51
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.52 E-value=1.2e-13 Score=118.48 Aligned_cols=100 Identities=22% Similarity=0.302 Sum_probs=79.6
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC-----CceEEEEccCCCHHHHHHhhc--CCcEEEEcC--
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALR--GVRSIICPS-- 171 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~-----~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a-- 171 (209)
+||||||||+||++++++|+++|++|+++.|.......... ..++++.+|++|++.+.++++ ++|.|||++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 58999999999999999999999999988654322111111 147789999999999999997 689999982
Q ss_pred ----h--------------hH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 ----E--------------GF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 ----~--------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
. ++ ++++|.+.++++||++||..+|+...
T Consensus 81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~ 129 (328)
T TIGR01179 81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPS 129 (328)
T ss_pred cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCC
Confidence 0 11 67888899999999999999987543
No 52
>PRK12320 hypothetical protein; Provisional
Probab=99.51 E-value=1e-13 Score=137.04 Aligned_cols=89 Identities=21% Similarity=0.366 Sum_probs=76.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (209)
|+|||||||||||++|+++|+++||+|++++|.+... ...+++++.+|++|+. +.+++.++|+|||++
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~~~~ 76 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTSAPG 76 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCccchh
Confidence 4899999999999999999999999999999876432 2346899999999995 889999999999992
Q ss_pred ----hhH--HHHHHHhCCCCEEEEeccc
Q 028418 172 ----EGF--ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 ----~g~--ll~AA~~aGVkriV~vSS~ 193 (209)
.++ ++++|+++|+ ||||+||.
T Consensus 77 ~vNv~Gt~nLleAA~~~Gv-RiV~~SS~ 103 (699)
T PRK12320 77 GVGITGLAHVANAAARAGA-RLLFVSQA 103 (699)
T ss_pred hHHHHHHHHHHHHHHHcCC-eEEEEECC
Confidence 122 7899999998 79999986
No 53
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.51 E-value=5.4e-14 Score=120.80 Aligned_cols=83 Identities=12% Similarity=0.099 Sum_probs=70.8
Q ss_pred EEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC-h-------
Q 028418 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS-E------- 172 (209)
Q Consensus 103 LVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a-~------- 172 (209)
||||||||||++|+++|+++|++|+++.+. ..+|++|++.+.++++ ++|+|||++ .
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~ 66 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHAN 66 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchh
Confidence 699999999999999999999998866432 2489999999999987 469999992 0
Q ss_pred -------------hH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 173 -------------GF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 173 -------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ ++++|++.+++|+||+||..||+..
T Consensus 67 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~ 108 (306)
T PLN02725 67 MTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKF 108 (306)
T ss_pred hhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCC
Confidence 11 7899999999999999999999854
No 54
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.49 E-value=3.1e-13 Score=113.35 Aligned_cols=99 Identities=19% Similarity=0.149 Sum_probs=79.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-CCcEEEEcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-GVRSIICPS 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-GvDaVIh~a 171 (209)
+++||||||||+||++++++|+++|++|++++|++..... ..+..++++.+|++|++++.+++. ++|.|||++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 3589999999999999999999999999999998754422 123458899999999999999987 899999972
Q ss_pred -------------h-----------hH------HHHHHHhCCCCEEEEeccccccc
Q 028418 172 -------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 172 -------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
. +. ++.++++.+.++||++||...+.
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~ 137 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLI 137 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhcc
Confidence 0 10 34556677889999999975443
No 55
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.49 E-value=1.4e-13 Score=118.60 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=74.1
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc----CCcEEEEcC-----
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPS----- 171 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~----GvDaVIh~a----- 171 (209)
|||||||||||++++++|+++|+ +|.++.|...... ........+.+|+++++.++.+.+ ++|+|||++
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~ 79 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK-FLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDT 79 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh-hhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccCc
Confidence 69999999999999999999998 6888776543321 111112467789999988887664 899999992
Q ss_pred -------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 -------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 -------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.++ ++++|++.++ +|||+||.++|+..
T Consensus 80 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~ 121 (314)
T TIGR02197 80 TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDG 121 (314)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCC
Confidence 011 7888998897 79999999999854
No 56
>PRK05865 hypothetical protein; Provisional
Probab=99.48 E-value=1.9e-13 Score=137.59 Aligned_cols=92 Identities=13% Similarity=0.275 Sum_probs=80.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (209)
|+|||||||||||++++++|+++|++|++++|+.... ...+++++.+|++|++.+.++++++|+|||++
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~~~ 77 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---WPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRNDH 77 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---cccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccchHH
Confidence 5799999999999999999999999999999975432 22358899999999999999999999999993
Q ss_pred ---hhH--HHHHHHhCCCCEEEEecccc
Q 028418 172 ---EGF--ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 172 ---~g~--ll~AA~~aGVkriV~vSS~~ 194 (209)
.++ ++++|++.+++||||+||..
T Consensus 78 vNv~GT~nLLeAa~~~gvkr~V~iSS~~ 105 (854)
T PRK05865 78 INIDGTANVLKAMAETGTGRIVFTSSGH 105 (854)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEECCcH
Confidence 122 78999999999999999963
No 57
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.48 E-value=1.3e-13 Score=118.05 Aligned_cols=97 Identities=19% Similarity=0.196 Sum_probs=65.8
Q ss_pred EEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcc--hhhh-----------------cCCceEEEEccCCCH------HH
Q 028418 104 VTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN--AMES-----------------FGTYVESMAGDASNK------KF 156 (209)
Q Consensus 104 VTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~--a~~~-----------------~~~~vevv~GDl~D~------~s 156 (209)
|||||||+|++|+++|++++. +|.+|+|+... +.+. ...+++++.||++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999887 89999998743 1111 156899999999885 45
Q ss_pred HHHhhcCCcEEEEcC-----------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 157 LKTALRGVRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 157 L~~AL~GvDaVIh~a-----------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+....+.+|+|||++ .|+ +++.|.+...++|+|+||..+.+...
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~ 143 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRP 143 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-T
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCC
Confidence 666678999999992 233 88999888888999999955554443
No 58
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.48 E-value=4.7e-13 Score=111.80 Aligned_cols=100 Identities=17% Similarity=0.220 Sum_probs=80.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
+++||||||||+||++++++|+++|++|+++.|++++.... .+..++++.+|++|++++.++++ ++|
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 83 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVD 83 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999999988654321 23468899999999999988876 689
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccC
Q 028418 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 166 aVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
+|||++ .++ +++++++.++++||++||...+..
T Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~ 146 (258)
T PRK12429 84 ILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG 146 (258)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC
Confidence 999972 010 445567788999999999765443
No 59
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.47 E-value=3.9e-13 Score=114.28 Aligned_cols=99 Identities=17% Similarity=0.206 Sum_probs=79.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC-------CcEEEEcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIICPS 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G-------vDaVIh~a 171 (209)
+++|+||||||+||++++++|+++|++|++++|++...... .+++++++|++|++++.++++. +|+|||++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~a 81 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNA 81 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 35899999999999999999999999999999987654322 4588999999999999998874 69999982
Q ss_pred ----h--------------------hH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 ----E--------------------GF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 ----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
. +. +++.+++.+.+|||++||...+...
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 139 (270)
T PRK06179 82 GVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPA 139 (270)
T ss_pred CCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCC
Confidence 0 11 2344677899999999997655443
No 60
>PRK06182 short chain dehydrogenase; Validated
Probab=99.47 E-value=4.3e-13 Score=114.67 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=81.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEEcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICPS 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh~a 171 (209)
+++++||||||+||++++++|+++|++|.+++|++++.......+++++.+|++|++++.++++ ++|+|||++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~a 82 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNA 82 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 5789999999999999999999999999999999876554434468899999999999998886 789999982
Q ss_pred ----h--------------------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 172 ----E--------------------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 172 ----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
. +. +++.+++.+..+||++||.+..
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~ 137 (273)
T PRK06182 83 GYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGK 137 (273)
T ss_pred CcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhc
Confidence 0 11 4456677888999999997643
No 61
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.46 E-value=7.1e-13 Score=111.24 Aligned_cols=102 Identities=16% Similarity=0.142 Sum_probs=80.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhcC-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG------- 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~G------- 163 (209)
..++++|||||||+||++++++|+++|++|+++.|++++... ..+..+.++++|++|++.+.++++.
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 346799999999999999999999999999999998854321 1234577899999999999887763
Q ss_pred CcEEEEcC-------------h-----------hH------HHHHH-HhCCCCEEEEecccccccC
Q 028418 164 VRSIICPS-------------E-----------GF------ISNAG-SLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~------ll~AA-~~aGVkriV~vSS~~Vyg~ 198 (209)
+|+|||++ . ++ +++++ ++.++++||++||...+..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~ 150 (262)
T PRK13394 85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA 150 (262)
T ss_pred CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC
Confidence 89999982 0 10 45566 6778999999999765543
No 62
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.45 E-value=6.6e-13 Score=110.74 Aligned_cols=99 Identities=15% Similarity=0.163 Sum_probs=76.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHh-------hcCCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTA-------LRGVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~A-------L~GvDa 166 (209)
+++|||||||+||++++++|+++|++|+++.|+++..... .+.+++++.+|+.|++++.++ +.++|.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 5899999999999999999999999999999987644221 234588999999999965544 456899
Q ss_pred EEEcC----h--------------------hH--HH----HHHHhCCCCEEEEecccccccC
Q 028418 167 IICPS----E--------------------GF--IS----NAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 167 VIh~a----~--------------------g~--ll----~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
|||++ . ++ ++ +.+++.++++||++||...+..
T Consensus 82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~ 143 (255)
T TIGR01963 82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVA 143 (255)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCC
Confidence 99982 0 11 23 3346788999999999765544
No 63
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.45 E-value=5.5e-13 Score=113.95 Aligned_cols=97 Identities=13% Similarity=0.251 Sum_probs=77.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
+++|||||||+||++++++|+++|++|.+++|+++.... ..+.+++++.+|++|++++.++++ ++|+|||
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 579999999999999999999999999999998765432 224568899999999999887764 5799999
Q ss_pred cC-------------h-----------hH--HHHHH----HhCCCCEEEEecccccc
Q 028418 170 PS-------------E-----------GF--ISNAG----SLKGVQHVILLSQRQRW 196 (209)
Q Consensus 170 ~a-------------~-----------g~--ll~AA----~~aGVkriV~vSS~~Vy 196 (209)
++ . ++ +++++ ++.+.++||++||.+..
T Consensus 83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 139 (276)
T PRK06482 83 NAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ 139 (276)
T ss_pred CCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc
Confidence 82 0 11 44554 67788999999997654
No 64
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.45 E-value=3.1e-13 Score=114.83 Aligned_cols=93 Identities=16% Similarity=0.117 Sum_probs=69.3
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-----h----
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-----E---- 172 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-----~---- 172 (209)
|||||||||||++++++|+++|++|++++|++.+........+ .|+.+ ..+.+++.++|+|||++ .
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~~ 75 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGY----KPWAP-LAESEALEGADAVINLAGEPIADKRWT 75 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceee----ecccc-cchhhhcCCCCEEEECCCCCcccccCC
Confidence 6999999999999999999999999999998876432221111 12322 55678899999999992 0
Q ss_pred -------------hH--HHHHHHhCCCC--EEEEecccccccCC
Q 028418 173 -------------GF--ISNAGSLKGVQ--HVILLSQRQRWHSS 199 (209)
Q Consensus 173 -------------g~--ll~AA~~aGVk--riV~vSS~~Vyg~~ 199 (209)
++ ++++|++++++ ++|+.|+.++|+..
T Consensus 76 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~ 119 (292)
T TIGR01777 76 EERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTS 119 (292)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCC
Confidence 01 77889999984 56667777788754
No 65
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.44 E-value=1.1e-12 Score=107.85 Aligned_cols=103 Identities=11% Similarity=0.099 Sum_probs=80.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh----hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~----~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
+.++||||||||+||++++++|+++|++|+++.|++.+... .....++++.+|++|.+++.++++ ++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 35799999999999999999999999999999998865321 223457889999999999988776 6899
Q ss_pred EEEcC-----h-------------------h--HHHHH----HHhCCCCEEEEecccccccCCC
Q 028418 167 IICPS-----E-------------------G--FISNA----GSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 167 VIh~a-----~-------------------g--~ll~A----A~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|||++ . + .++++ +++.++++||++||...++...
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~ 149 (239)
T PRK12828 86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGP 149 (239)
T ss_pred EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCC
Confidence 99972 0 0 03333 3467899999999988776543
No 66
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.44 E-value=9.7e-13 Score=113.13 Aligned_cols=101 Identities=11% Similarity=0.142 Sum_probs=79.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhc-------CCcEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~-------GvDaVI 168 (209)
+++||||||+|+||++++++|+++|++|++++|++++.... .+..+.++.+|++|++++.++++ ++|+||
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv 83 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV 83 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 46899999999999999999999999999999988765322 23457889999999999988876 579999
Q ss_pred EcC----h--------------------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 169 CPS----E--------------------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 169 h~a----~--------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
|++ . ++ ++++ +++.+.++||++||.+.+...
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~ 144 (277)
T PRK06180 84 NNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM 144 (277)
T ss_pred ECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC
Confidence 982 0 11 2333 456677899999997765443
No 67
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.44 E-value=1.4e-12 Score=107.33 Aligned_cols=103 Identities=16% Similarity=0.219 Sum_probs=79.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------hhcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------~~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..+++||||||||+||++++++|+++|++|.++.|+..+.. ...+.+++++.+|+.|++.+.++++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence 34579999999999999999999999999988887665321 1223568899999999999988875
Q ss_pred CCcEEEEcC------h------------------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 163 GVRSIICPS------E------------------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 GvDaVIh~a------~------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
++|.|||++ . +. ++++ +++.++++||++||.+.+...
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~ 150 (249)
T PRK12825 84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW 150 (249)
T ss_pred CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC
Confidence 579999982 0 00 2333 367789999999998776543
No 68
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.43 E-value=1e-12 Score=109.30 Aligned_cols=103 Identities=15% Similarity=0.167 Sum_probs=80.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-----CCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-----~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
..+++|||||||+||++++++|+++|++|++++|++.+..... +..+.++.+|+.|++++.++++ .+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3569999999999999999999999999999999986543211 2347799999999999998875 469
Q ss_pred EEEEcC-----h--------------------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 166 SIICPS-----E--------------------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a-----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|||++ . ++ +++++++.+.++||++||...+....
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~ 149 (251)
T PRK07231 84 ILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRP 149 (251)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCC
Confidence 999982 0 00 33445567889999999988766544
No 69
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.42 E-value=1e-12 Score=128.13 Aligned_cols=103 Identities=14% Similarity=0.187 Sum_probs=80.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC---cEEEEEeCCcch--hhhc-------------------------CCceEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNA--MESF-------------------------GTYVESM 147 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~---~VraLvR~~~~a--~~~~-------------------------~~~vevv 147 (209)
..++|||||||||+|++|+++|++.+. +|.+|+|..... .+.+ ...++++
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 577999999999999999999998764 679999965321 1000 2358899
Q ss_pred EccCCCH------HHHHHhhcCCcEEEEcC-----------------hhH--HHHHHHhC-CCCEEEEecccccccCCC
Q 028418 148 AGDASNK------KFLKTALRGVRSIICPS-----------------EGF--ISNAGSLK-GVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 148 ~GDl~D~------~sL~~AL~GvDaVIh~a-----------------~g~--ll~AA~~a-GVkriV~vSS~~Vyg~~~ 200 (209)
.||++++ +.++.+.+.+|+|||++ .|+ ++++|++. ++++|||+||..||+...
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~ 276 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQ 276 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCC
Confidence 9999997 45666678899999992 122 78888776 589999999999998864
No 70
>PRK06194 hypothetical protein; Provisional
Probab=99.42 E-value=2.7e-12 Score=110.03 Aligned_cols=73 Identities=12% Similarity=0.061 Sum_probs=61.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||++++++|+++|++|+++.|+.+..... .+..+.++.+|++|++.+.++++ .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 457899999999999999999999999999999976543211 13357789999999999998886 47
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 85 d~vi~~ 90 (287)
T PRK06194 85 HLLFNN 90 (287)
T ss_pred CEEEEC
Confidence 999998
No 71
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.40 E-value=2.3e-12 Score=111.03 Aligned_cols=99 Identities=13% Similarity=0.120 Sum_probs=80.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--------CCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--------GVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--------GvDaVIh~ 170 (209)
+++||||||+|+||++++++|.++|++|.+++|+++........+++++.+|++|++++.++++ .+|.|||+
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~ 83 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNN 83 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEEC
Confidence 4689999999999999999999999999999999876654434468899999999998887765 46999997
Q ss_pred C------------------------hh------HHHHHHHhCCCCEEEEeccccccc
Q 028418 171 S------------------------EG------FISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 171 a------------------------~g------~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
+ .+ .+++++++.+..+||++||...+.
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~ 140 (277)
T PRK05993 84 GAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV 140 (277)
T ss_pred CCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC
Confidence 2 01 045667788899999999976543
No 72
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.40 E-value=3.4e-12 Score=106.52 Aligned_cols=99 Identities=14% Similarity=0.158 Sum_probs=78.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-----cCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-----~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
.++++|||||+|+||++++++|+++|++|.++.|+.+..... .+..++++++|++|++++.++++ .+|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 356999999999999999999999999999999987643221 13457899999999999988875 689
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 166 SIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 166 aVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+|||++ + ++ +++++++.+.++||++||....
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~ 144 (252)
T PRK06138 84 VLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLAL 144 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhc
Confidence 999982 0 11 3445567788999999997554
No 73
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.39 E-value=4e-12 Score=104.71 Aligned_cols=99 Identities=14% Similarity=0.203 Sum_probs=77.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhcC-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALRG-------V 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~G-------v 164 (209)
++++||||||+|+||++++++|+++|++|.++.|++.+.... .+..++++.+|+.|++++.+++++ +
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 346899999999999999999999999999999988654221 234578999999999999888764 5
Q ss_pred cEEEEcC----h--------------------hH--HHHHH----HhCCCCEEEEecccccc
Q 028418 165 RSIICPS----E--------------------GF--ISNAG----SLKGVQHVILLSQRQRW 196 (209)
Q Consensus 165 DaVIh~a----~--------------------g~--ll~AA----~~aGVkriV~vSS~~Vy 196 (209)
|+|||++ . +. +++++ .+.++++||++||....
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~ 145 (246)
T PRK05653 84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGV 145 (246)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc
Confidence 9999982 0 00 23333 56788999999997543
No 74
>PRK08264 short chain dehydrogenase; Validated
Probab=99.39 E-value=5.9e-12 Score=104.73 Aligned_cols=101 Identities=18% Similarity=0.287 Sum_probs=80.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc---CCcEEEEcC-h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPS-E 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~---GvDaVIh~a-~ 172 (209)
..++||||||||+||++++++|+++|+ +|++++|++++... .+.+++++.+|+.|++.+.++++ .+|+|||++ .
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 83 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGI 83 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 456899999999999999999999999 99999998876543 44578999999999999998887 479999982 0
Q ss_pred ------------------------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 173 ------------------------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 173 ------------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
+. ++++ +++.+..+||++||...+...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~ 140 (238)
T PRK08264 84 FRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF 140 (238)
T ss_pred CCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC
Confidence 00 2333 345678899999997766543
No 75
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.39 E-value=2.4e-12 Score=105.61 Aligned_cols=100 Identities=12% Similarity=0.097 Sum_probs=77.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHHhhc---CCcEEEEcC--
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPS-- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~AL~---GvDaVIh~a-- 171 (209)
++++|||||+|+||+++++.|+++ ++|.+++|++.+..... ..+++++++|++|++.+.++++ ++|+|||++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 468999999999999999999999 99999999876543221 2358899999999999999997 589999982
Q ss_pred --h---------h-----------H------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 --E---------G-----------F------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 --~---------g-----------~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
. . . +++++++ ..+++|++||..+++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~v~~ss~~~~~~~~ 137 (227)
T PRK08219 82 ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA-AHGHVVFINSGAGLRANP 137 (227)
T ss_pred CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCeEEEEcchHhcCcCC
Confidence 0 0 0 2333333 357999999987765443
No 76
>PLN02778 3,5-epimerase/4-reductase
Probab=99.38 E-value=2.4e-12 Score=113.74 Aligned_cols=84 Identities=11% Similarity=0.064 Sum_probs=64.9
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC--
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS-- 171 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a-- 171 (209)
+...|+|||||||||||++|+++|+++|++|++.. +|+.|.+.+...++ ++|+|||++
T Consensus 6 ~~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~ 67 (298)
T PLN02778 6 GSATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------GRLENRASLEADIDAVKPTHVFNAAGV 67 (298)
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------CccCCHHHHHHHHHhcCCCEEEECCcc
Confidence 44567899999999999999999999999987432 34567777777776 689999992
Q ss_pred ----h-----------------hH--HHHHHHhCCCCEEEEecccccccC
Q 028418 172 ----E-----------------GF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 172 ----~-----------------g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
. ++ ++++|++.|+++ |++||..+|+.
T Consensus 68 ~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~-v~~sS~~vy~~ 116 (298)
T PLN02778 68 TGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVL-TNYATGCIFEY 116 (298)
T ss_pred cCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCE-EEEecceEeCC
Confidence 0 11 789999999975 55566677754
No 77
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.38 E-value=5.2e-12 Score=104.85 Aligned_cols=99 Identities=17% Similarity=0.182 Sum_probs=78.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..++||||||+|+||++++++|+++|++|++++|++++... ..+..++++.+|+.|++++.++++ .+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 35689999999999999999999999999999998654321 112458899999999999999886 68
Q ss_pred cEEEEcC----h--------------------hH--HHHH----HHhCCCCEEEEecccccc
Q 028418 165 RSIICPS----E--------------------GF--ISNA----GSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 165 DaVIh~a----~--------------------g~--ll~A----A~~aGVkriV~vSS~~Vy 196 (209)
|+|||++ . ++ ++++ +++.+.++||++||...+
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~ 146 (251)
T PRK12826 85 DILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGP 146 (251)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhh
Confidence 9999982 0 00 3333 356778999999998776
No 78
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.38 E-value=1.8e-12 Score=116.86 Aligned_cols=98 Identities=18% Similarity=0.310 Sum_probs=73.5
Q ss_pred EEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchh---hhc-----CCce----EEEEccCCCHHHHHHhhc--CCcE
Q 028418 102 VLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM---ESF-----GTYV----ESMAGDASNKKFLKTALR--GVRS 166 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~---~~~-----~~~v----evv~GDl~D~~sL~~AL~--GvDa 166 (209)
||||||+|.||+.||++|++.+ .+++++.|+..+.- ..+ ..++ ..+.||++|++.+..+++ ++|.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 7999999999999999999998 47999999876431 112 1234 346999999999999999 9999
Q ss_pred EEEcC--------------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 167 IICPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 167 VIh~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
|||.+ .|+ ++++|.+++|+|||++||--+...+
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~Pt 135 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPT 135 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCC
Confidence 99982 133 8999999999999999997665444
No 79
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.38 E-value=3.5e-12 Score=106.36 Aligned_cols=103 Identities=16% Similarity=0.228 Sum_probs=80.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||||+||++++++|+++|++|.+++|+....... .+..++++.+|++|++++.++++ .+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 367999999999999999999999999999999987654321 23458899999999999988875 58
Q ss_pred cEEEEcC-------------h-----------hH--H----HHHHHhCCCCEEEEecccccccCCC
Q 028418 165 RSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~--l----l~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|.|||++ . +. + ++++++.+.++||++||.+.+....
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~ 147 (250)
T TIGR03206 82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS 147 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC
Confidence 9999982 0 00 2 2334467889999999988765543
No 80
>PRK09186 flagellin modification protein A; Provisional
Probab=99.38 E-value=4.6e-12 Score=106.24 Aligned_cols=99 Identities=13% Similarity=0.101 Sum_probs=77.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--------cCCceEEEEccCCCHHHHHHhhcC------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALRG------ 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--------~~~~vevv~GDl~D~~sL~~AL~G------ 163 (209)
..+++|||||+|+||++++++|+++|++|+++.|++++.... ....+.++++|++|++++.++++.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 357999999999999999999999999999999987654211 122466789999999999888864
Q ss_pred -CcEEEEcC----h-----------------------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 164 -VRSIICPS----E-----------------------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 -vDaVIh~a----~-----------------------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+|+|||++ . +. +++++++.+.++||++||...+
T Consensus 83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 149 (256)
T PRK09186 83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGV 149 (256)
T ss_pred CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhh
Confidence 79999982 0 00 3445566788999999996654
No 81
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.37 E-value=6.8e-12 Score=105.87 Aligned_cols=98 Identities=15% Similarity=0.198 Sum_probs=78.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
|+||||||||+||.++++.|+++|++|.++.|++++.... .+.+++++.+|++|++++.++++ ++|.|||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5899999999999999999999999999999988654322 24568899999999999888775 7899999
Q ss_pred cC---h----------------------hH------HHHHHHhCCCCEEEEeccccccc
Q 028418 170 PS---E----------------------GF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 170 ~a---~----------------------g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
++ . ++ ++.++++.+.++||++||.....
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 139 (248)
T PRK10538 81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW 139 (248)
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC
Confidence 72 0 10 34455677889999999976543
No 82
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.37 E-value=7.2e-12 Score=104.48 Aligned_cols=101 Identities=17% Similarity=0.241 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||++++++|+++|++|++++|++.+... ..+.+++++.+|++|++++.++++ ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 35789999999999999999999999999999998765322 123468899999999999998886 79
Q ss_pred cEEEEcC----h--------------------hH--HHH----HHHhCCCCEEEEecccccccC
Q 028418 165 RSIICPS----E--------------------GF--ISN----AGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 165 DaVIh~a----~--------------------g~--ll~----AA~~aGVkriV~vSS~~Vyg~ 198 (209)
|+|||++ . ++ +.+ ...+.+.+++|++||...+..
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~ 149 (239)
T PRK07666 86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG 149 (239)
T ss_pred cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC
Confidence 9999982 0 00 223 334677899999999765443
No 83
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.37 E-value=6.6e-12 Score=107.66 Aligned_cols=102 Identities=13% Similarity=0.170 Sum_probs=79.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVI 168 (209)
.++||||||+|+||++++++|+++|++|++++|++++... ..+..+.++.+|++|++++.++++ ++|+||
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3589999999999999999999999999999998865432 223457889999999999887765 579999
Q ss_pred EcC----h--------------------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 169 CPS----E--------------------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 169 h~a----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|++ . ++ ++..+++.+.++||++||.+.+...+
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~ 144 (275)
T PRK08263 83 NNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFP 144 (275)
T ss_pred ECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCC
Confidence 982 0 11 23334667889999999987665443
No 84
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.37 E-value=6.4e-12 Score=104.91 Aligned_cols=103 Identities=14% Similarity=0.128 Sum_probs=80.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||+.++++|+++|++|++++|++++.... .+.++.++.+|++|++++.++++ .+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 357899999999999999999999999999999988654321 13468899999999999888875 48
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 165 RSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|.|||++ . ++ +++.+++.+..+||++||...++...
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 150 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFP 150 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCC
Confidence 9999982 0 00 23334566778999999988765543
No 85
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.36 E-value=9.1e-12 Score=103.11 Aligned_cols=96 Identities=18% Similarity=0.200 Sum_probs=77.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc------CCcEEEEcC-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICPS- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~------GvDaVIh~a- 171 (209)
.++||||||||+||++++++|+++|++|+++.|++... . ..+++.+|++|++++.++++ ++|+|||++
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag 77 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---F--PGELFACDLADIEQTAATLAQINEIHPVDAIVNNVG 77 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---c--CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 46899999999999999999999999999999987652 1 13688999999999888876 789999982
Q ss_pred ------------h-----------hH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 ------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 ------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
. +. +++++++.+.++||++||..+++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 134 (234)
T PRK07577 78 IALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL 134 (234)
T ss_pred CCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC
Confidence 0 11 3455667788999999998776543
No 86
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.36 E-value=7.2e-12 Score=103.90 Aligned_cols=100 Identities=19% Similarity=0.279 Sum_probs=77.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cC--CceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~--~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
.+++||||||||+||++++++|+++|++|++++|++.+.... .. .+++++.+|++|++++.++++ ++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357899999999999999999999999999999988654322 11 458899999999999988876 789
Q ss_pred EEEEcC----h--------------------hH--HHHHHH---hCCCCEEEEeccccccc
Q 028418 166 SIICPS----E--------------------GF--ISNAGS---LKGVQHVILLSQRQRWH 197 (209)
Q Consensus 166 aVIh~a----~--------------------g~--ll~AA~---~aGVkriV~vSS~~Vyg 197 (209)
+|||++ . +. +++++. ..+.++||++||...+.
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~ 145 (237)
T PRK07326 85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN 145 (237)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc
Confidence 999972 0 00 333432 24668999999976543
No 87
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.36 E-value=7.6e-12 Score=107.63 Aligned_cols=106 Identities=15% Similarity=0.192 Sum_probs=80.0
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc------
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
....++++|||||+|+||++++++|+++|++|.++.|+....... .+..++++.+|++|++++.++++
T Consensus 6 ~~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 6 PHPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL 85 (274)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 345567999999999999999999999999999999977543211 13457889999999999988775
Q ss_pred -CCcEEEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCCC
Q 028418 163 -GVRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 -GvDaVIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+|+|||++ . ++ ++++ ..+.+..+||++||...+...+
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~ 154 (274)
T PRK07775 86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP 154 (274)
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC
Confidence 579999982 0 01 2223 3355678999999987765443
No 88
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.36 E-value=1.2e-11 Score=102.00 Aligned_cols=98 Identities=17% Similarity=0.250 Sum_probs=74.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------hhcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------~~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.+++||||||||+||+++++.|+++|++|+++.|++.+.. ...+..+.++.+|++|++++.++++ +
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3469999999999999999999999999999998765311 1123457889999999999888775 6
Q ss_pred CcEEEEcC-------------h-----------hH--HH----HHHHhCCCCEEEEeccccc
Q 028418 164 VRSIICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll----~AA~~aGVkriV~vSS~~V 195 (209)
+|+|||++ . +. ++ +++.+.+.++||++||...
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~ 145 (248)
T PRK05557 84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVG 145 (248)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEccccc
Confidence 89999982 0 00 23 3344567889999999643
No 89
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.35 E-value=1.2e-11 Score=103.40 Aligned_cols=98 Identities=14% Similarity=0.199 Sum_probs=74.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h------hhcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~------~~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++|||||||+||++++++|+++|++|++++|+.... . ...+..+.++.+|++|++.+.++++ +
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 357899999999999999999999999999999976431 1 1113457889999999999987775 6
Q ss_pred CcEEEEcC-h-----------------hH--HHHHHHhC--CCCEEEEeccccc
Q 028418 164 VRSIICPS-E-----------------GF--ISNAGSLK--GVQHVILLSQRQR 195 (209)
Q Consensus 164 vDaVIh~a-~-----------------g~--ll~AA~~a--GVkriV~vSS~~V 195 (209)
+|+|||++ . ++ +++++... .-.+||++||..+
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~ 138 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQA 138 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchh
Confidence 89999982 0 11 56666542 2358999999654
No 90
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.34 E-value=9.5e-12 Score=104.25 Aligned_cols=101 Identities=12% Similarity=0.137 Sum_probs=77.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-hhcCCceEEEEccCCCHHHHHHhhc-----------CCcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALR-----------GVRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-~~~~~~vevv~GDl~D~~sL~~AL~-----------GvDa 166 (209)
++++|||||||+||++++++|+++|++|.+++|+..+.. ...+.++.++.+|++|++++.+++. ..|.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 468999999999999999999999999999999875432 2234468899999999999888543 3678
Q ss_pred EEEcC-------------------------hhH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 167 IICPS-------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 167 VIh~a-------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+||++ .+. +++.+.+.+.++||++||...+...
T Consensus 81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~ 144 (243)
T PRK07023 81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAY 144 (243)
T ss_pred EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCC
Confidence 88871 011 2344455677899999998766543
No 91
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.34 E-value=8.2e-12 Score=109.04 Aligned_cols=102 Identities=15% Similarity=0.170 Sum_probs=79.7
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh----h---c-CCceEEEEccCCCHHHHHHhhc----
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S---F-GTYVESMAGDASNKKFLKTALR---- 162 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~----~---~-~~~vevv~GDl~D~~sL~~AL~---- 162 (209)
....+++||||||+|+||++++++|+++|++|+++.|+.++... . . +..++++.+|++|++++.++++
T Consensus 12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 91 (306)
T PRK06197 12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA 91 (306)
T ss_pred ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 34566899999999999999999999999999999998765321 1 1 2357899999999999988765
Q ss_pred ---CCcEEEEcC-----------h-----------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 163 ---GVRSIICPS-----------E-----------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 163 ---GvDaVIh~a-----------~-----------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.+|+|||++ + +. +++.+++.+..+||++||.+.+
T Consensus 92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~ 156 (306)
T PRK06197 92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHR 156 (306)
T ss_pred hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHh
Confidence 589999982 0 11 4555666777899999997644
No 92
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.34 E-value=8.6e-12 Score=105.48 Aligned_cols=97 Identities=18% Similarity=0.116 Sum_probs=75.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh----cCCceEEEEccCCCHHHHHHhhc--------CCcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALR--------GVRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~----~~~~vevv~GDl~D~~sL~~AL~--------GvDa 166 (209)
|+++|||||||+||++++++|+++|++|.++.|++++.... .+..++++.+|++|.+.+.++++ .+|+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 46899999999999999999999999999999988764322 13468999999999999988775 4599
Q ss_pred EEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEeccccc
Q 028418 167 IICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQR 195 (209)
Q Consensus 167 VIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~V 195 (209)
|||++ . ++ ++++ .+..+..+||++||...
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~ 139 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASA 139 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhh
Confidence 99982 0 00 3333 34566789999999654
No 93
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.34 E-value=1.3e-11 Score=103.23 Aligned_cols=100 Identities=16% Similarity=0.204 Sum_probs=75.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEE-EEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~Vra-LvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.+++|||||||+||++++++|+++|++|++ +.|+..+... ..+.+++++.+|++|++.+.++++ .+
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRL 83 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999887 4676654321 123457889999999999988876 57
Q ss_pred cEEEEcC----h--------------------hH--H----HHHHHhCCCCEEEEecccccccC
Q 028418 165 RSIICPS----E--------------------GF--I----SNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 165 DaVIh~a----~--------------------g~--l----l~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
|+|||.+ . ++ + +++.++.+.++||++||...+..
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 147 (250)
T PRK08063 84 DVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY 147 (250)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC
Confidence 9999972 0 11 2 33344567789999999766543
No 94
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.33 E-value=1.4e-11 Score=103.37 Aligned_cols=101 Identities=15% Similarity=0.134 Sum_probs=74.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEE-EeCCcchhh----h--cCCceEEEEccCCCHHHHHHhhc--------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME----S--FGTYVESMAGDASNKKFLKTALR-------- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraL-vR~~~~a~~----~--~~~~vevv~GDl~D~~sL~~AL~-------- 162 (209)
..++|+||||+|+||++++++|+++|++|.++ .|+.++... . .+..++++.+|++|++++.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 45799999999999999999999999999886 466543321 1 12357889999999999988876
Q ss_pred -----CCcEEEEcC----h--------------------hH--HHHHHHh--CCCCEEEEecccccccC
Q 028418 163 -----GVRSIICPS----E--------------------GF--ISNAGSL--KGVQHVILLSQRQRWHS 198 (209)
Q Consensus 163 -----GvDaVIh~a----~--------------------g~--ll~AA~~--aGVkriV~vSS~~Vyg~ 198 (209)
++|+|||++ . ++ +++++.. ....+||++||..++..
T Consensus 85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~ 153 (254)
T PRK12746 85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG 153 (254)
T ss_pred ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC
Confidence 589999982 0 00 3344332 23368999999877654
No 95
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.33 E-value=1.4e-11 Score=104.20 Aligned_cols=102 Identities=18% Similarity=0.228 Sum_probs=77.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...+++|||||+|+||+++++.|+++|++|.++.|+..+.... .+..+.++.+|++|++++.++++ .
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3457999999999999999999999999999999987543211 23457889999999999976664 5
Q ss_pred CcEEEEcC-------------h-----------hH--HHHHHHh-----CCCCEEEEecccccccC
Q 028418 164 VRSIICPS-------------E-----------GF--ISNAGSL-----KGVQHVILLSQRQRWHS 198 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll~AA~~-----aGVkriV~vSS~~Vyg~ 198 (209)
+|+|||++ . +. +++++.. .+..+||++||...+..
T Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~ 155 (259)
T PRK08213 90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGG 155 (259)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccC
Confidence 79999982 0 11 4554433 47789999999765543
No 96
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.33 E-value=8.5e-12 Score=106.45 Aligned_cols=101 Identities=17% Similarity=0.107 Sum_probs=78.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
.++||||||||.||++++++|+++|++|+++.|++++..... ...++++.+|++|++++.++++ ++|.+||
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN 84 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 468999999999999999999999999999999886653221 1247889999999999776664 5799999
Q ss_pred cC----h--------------------hH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 170 PS----E--------------------GF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 170 ~a----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ . +. ++..+++.+..+||++||...+...
T Consensus 85 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 144 (273)
T PRK07825 85 NAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV 144 (273)
T ss_pred CCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC
Confidence 82 0 00 3455667888999999998765433
No 97
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.33 E-value=3e-11 Score=100.20 Aligned_cols=101 Identities=16% Similarity=0.217 Sum_probs=76.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc----hhh------hcCCceEEEEccCCCHHHHHHhhc-----
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AME------SFGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~----a~~------~~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
.+++||||||+|+||++++++|+++|++|++++|.... ... ..+..++++.+|+.|++++.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999998764321 111 113457899999999999988873
Q ss_pred --CCcEEEEcC---h---------------------hH--HHHHHH-----hCCCCEEEEecccccccC
Q 028418 163 --GVRSIICPS---E---------------------GF--ISNAGS-----LKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 163 --GvDaVIh~a---~---------------------g~--ll~AA~-----~aGVkriV~vSS~~Vyg~ 198 (209)
++|.|||++ . ++ +++++. +.+.++||++||...+..
T Consensus 85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 153 (249)
T PRK12827 85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRG 153 (249)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCC
Confidence 689999982 0 01 455554 568899999999776543
No 98
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.7e-11 Score=102.47 Aligned_cols=102 Identities=18% Similarity=0.174 Sum_probs=77.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||++++++|+++|++|+++.|++...... ....+.++..|++|++++.++++ .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 457899999999999999999999999999999987543211 12356789999999998887765 68
Q ss_pred cEEEEcC-h--------------------------hH--HHHHH----HhCCCCEEEEecccccccCC
Q 028418 165 RSIICPS-E--------------------------GF--ISNAG----SLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 165 DaVIh~a-~--------------------------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~ 199 (209)
|.|||++ . ++ +++++ .+.+.++||++||..++...
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 152 (250)
T PRK07774 85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS 152 (250)
T ss_pred CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCc
Confidence 9999972 0 00 23333 34467899999998776543
No 99
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.32 E-value=1.4e-11 Score=102.00 Aligned_cols=100 Identities=13% Similarity=0.130 Sum_probs=77.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEE-EeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraL-vR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.+++||||||||+||++++++|+++|++|+++ .|++.+.... .+..+.++.+|++|++++.++++ +
T Consensus 4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 45789999999999999999999999999999 8877543211 23458899999999999988876 7
Q ss_pred CcEEEEcC-------------h-----------hH--HH----HHHHhCCCCEEEEeccccccc
Q 028418 164 VRSIICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll----~AA~~aGVkriV~vSS~~Vyg 197 (209)
+|+|||++ . +. ++ +..++.+.++||++||...+.
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~ 147 (247)
T PRK05565 84 IDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLI 147 (247)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhcc
Confidence 99999972 0 11 23 334456778999999976543
No 100
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.32 E-value=1e-11 Score=106.42 Aligned_cols=93 Identities=13% Similarity=0.204 Sum_probs=80.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C---hh--
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S---EG-- 173 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a---~g-- 173 (209)
|+|.|.||||.+|+++++.++.+||+|+|++|++++.... .++.+++.|+.|++++.+.+.|.|+||.. . .+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~ 78 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDND 78 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--ccceeecccccChhhhHhhhcCCceEEEeccCCCCChh
Confidence 6899999999999999999999999999999999987543 46889999999999999999999999987 1 11
Q ss_pred --------HHHHHHHhCCCCEEEEecccc
Q 028418 174 --------FISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 174 --------~ll~AA~~aGVkriV~vSS~~ 194 (209)
.++++.+.+|+.|++.+...+
T Consensus 79 ~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 79 ELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred HHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 177788888999999986543
No 101
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.31 E-value=1.3e-11 Score=105.52 Aligned_cols=98 Identities=13% Similarity=0.188 Sum_probs=74.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--------cCCceEEEEccCCCHHHHHH---h---hcCC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKT---A---LRGV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--------~~~~vevv~GDl~D~~sL~~---A---L~Gv 164 (209)
++++|||||||+||+++++.|+++|++|++++|+++..... .+..++++.+|++|++++.+ + +..+
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 45799999999999999999999999999999987643211 12458899999999998765 1 2357
Q ss_pred cEEEEcC-------------h-----------hH--HH----HHHHhCCCCEEEEecccccc
Q 028418 165 RSIICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~--ll----~AA~~aGVkriV~vSS~~Vy 196 (209)
|+|||++ . ++ ++ +++++.+.++||++||....
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~ 144 (280)
T PRK06914 83 DLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGR 144 (280)
T ss_pred eEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccc
Confidence 9999982 0 11 23 33567788999999996543
No 102
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.31 E-value=1.8e-11 Score=102.52 Aligned_cols=98 Identities=13% Similarity=0.072 Sum_probs=75.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhcC----CcEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRG----VRSI 167 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~G----vDaV 167 (209)
+++|+||||||+||+++++.|+++|++|.+++|++++.... .+.+++++++|++|++.+.++++. +|.|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 46899999999999999999999999999999988654321 134688999999999998887764 5999
Q ss_pred EEcC-------------h-----------hH--HH----HHHHhCCCCEEEEecccccc
Q 028418 168 ICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 168 Ih~a-------------~-----------g~--ll----~AA~~aGVkriV~vSS~~Vy 196 (209)
||++ + ++ ++ ..+.+.+..+||++||....
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 139 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGD 139 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEeccccc
Confidence 9861 0 11 22 33445678999999997543
No 103
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.31 E-value=2.7e-11 Score=101.35 Aligned_cols=98 Identities=17% Similarity=0.217 Sum_probs=75.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------c-CCceEEEEccCCCHHHHHHhhc-------C
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~-~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
++++|||||||+||++++++|+++|++|.+++|++.+.... . +..++++.+|++|++++.++++ +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999988654321 1 3357889999999998877654 6
Q ss_pred CcEEEEcC-------------h-----------hH--H----HHHHHhCCCCEEEEecccccc
Q 028418 164 VRSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--l----l~AA~~aGVkriV~vSS~~Vy 196 (209)
+|.|||++ . +. + ++.+++.+..+||++||....
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 144 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAV 144 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccc
Confidence 89999982 0 00 2 233456788999999996543
No 104
>PRK08017 oxidoreductase; Provisional
Probab=99.30 E-value=1.7e-11 Score=102.75 Aligned_cols=98 Identities=16% Similarity=0.128 Sum_probs=77.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--------CCcEEEEcC
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--------GVRSIICPS 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--------GvDaVIh~a 171 (209)
++||||||||+||+++++.|+++|++|+++.|++++.......+++++.+|++|++.+.++++ .+|.+||++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a 82 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 479999999999999999999999999999998876544333457889999999998777653 357888872
Q ss_pred -h-----------------------hH------HHHHHHhCCCCEEEEeccccccc
Q 028418 172 -E-----------------------GF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 172 -~-----------------------g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
. ++ +++++++.+.++||++||...+.
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~ 138 (256)
T PRK08017 83 GFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI 138 (256)
T ss_pred CCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc
Confidence 0 01 35667788889999999975443
No 105
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.30 E-value=5.7e-12 Score=114.13 Aligned_cols=103 Identities=19% Similarity=0.188 Sum_probs=78.4
Q ss_pred CCccccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC--cch--hhh-cCCceEEEEccCCCHHHHHHhhcCCc
Q 028418 91 EDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK--RNA--MES-FGTYVESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 91 ~~~~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~--~~a--~~~-~~~~vevv~GDl~D~~sL~~AL~GvD 165 (209)
|+.+..+ ..+|+||||.||||+|||+.|+.+||+|.|++--. .+. ... -.+.++.+.-|+..| .+.+||
T Consensus 20 ~~~~p~~-~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD 93 (350)
T KOG1429|consen 20 EQVKPSQ-NLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEVD 93 (350)
T ss_pred hcccCCC-CcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHhh
Confidence 4444433 37999999999999999999999999999998322 111 111 125678888888766 788899
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 166 SIICPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.|||++ .++ ++-.|++.+ +||+|.|+..|||++.
T Consensus 94 ~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~ 149 (350)
T KOG1429|consen 94 QIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPL 149 (350)
T ss_pred hhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcc
Confidence 999982 122 566788888 9999999999999854
No 106
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.30 E-value=1.9e-11 Score=103.58 Aligned_cols=98 Identities=14% Similarity=0.128 Sum_probs=77.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cC--CceEEEEccCCCHHHHHHhhcC-------CcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRG-------VRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~--~~vevv~GDl~D~~sL~~AL~G-------vDa 166 (209)
+++||||||||+||++++++|+++|++|.+++|++++.... .. .++.++.+|++|++++.++++. +|.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 46899999999999999999999999999999987654321 11 1578999999999999888753 699
Q ss_pred EEEcC---------h----------------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 167 IICPS---------E----------------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 167 VIh~a---------~----------------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+||++ . ++ ++.++++.+..+||++||...+
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~ 142 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGV 142 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhc
Confidence 99971 0 11 3446677788999999996554
No 107
>PRK06398 aldose dehydrogenase; Validated
Probab=99.30 E-value=4.5e-11 Score=102.00 Aligned_cols=98 Identities=16% Similarity=0.211 Sum_probs=77.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
..++++|||||+|+||++++++|+++|++|.++.|+.... ..++++++|++|++++.++++ .+|.|||
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4567999999999999999999999999999999986542 247889999999999988875 6899999
Q ss_pred cC-------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 170 PS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 170 ~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ + ++ ++++ .++.+..+||++||...+...
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 138 (258)
T PRK06398 79 NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVT 138 (258)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCC
Confidence 72 0 11 2333 345567899999998776543
No 108
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.30 E-value=3.1e-11 Score=103.01 Aligned_cols=101 Identities=14% Similarity=0.140 Sum_probs=79.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
++||||||||+||++++++|+++|++|.+++|+.++... ..+..+.++.+|++|++++.++++ ++|.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999999999998765432 123467889999999999888775 6899
Q ss_pred EEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 167 IICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 167 VIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|||++ . +. +++.+++.+..+||++||...+....
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~ 144 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGP 144 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCC
Confidence 99982 0 00 34446677889999999987654443
No 109
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.30 E-value=4.6e-11 Score=99.09 Aligned_cols=100 Identities=13% Similarity=0.130 Sum_probs=76.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhh-------cCCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTAL-------RGVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL-------~GvDa 166 (209)
..++++|||||||+||+++++.|+++|+.|.+..|++++... ..+.+++++.+|++|.+++.+++ ..+|+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 346799999999999999999999999999888887765432 22346889999999999988775 36899
Q ss_pred EEEcC----h--------------------hH--HHHH----HHhCCCCEEEEecccccc
Q 028418 167 IICPS----E--------------------GF--ISNA----GSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 167 VIh~a----~--------------------g~--ll~A----A~~aGVkriV~vSS~~Vy 196 (209)
|||++ . +. ++++ +++.+.++||++||...+
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 143 (245)
T PRK12936 84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGV 143 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhC
Confidence 99982 0 11 2333 334577899999996543
No 110
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.29 E-value=2.5e-11 Score=117.63 Aligned_cols=84 Identities=10% Similarity=0.075 Sum_probs=67.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC--
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS-- 171 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a-- 171 (209)
+.+.|+|||||||||||++|++.|.++|++|.. ..+|++|++.+.++++ +.|+|||++
T Consensus 377 ~~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~ 438 (668)
T PLN02260 377 GKPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------GKGRLEDRSSLLADIRNVKPTHVFNAAGV 438 (668)
T ss_pred CCCCceEEEECCCchHHHHHHHHHHhCCCeEEe------------------eccccccHHHHHHHHHhhCCCEEEECCcc
Confidence 556779999999999999999999999998731 1256889999988887 789999992
Q ss_pred -----h----------------hH--HHHHHHhCCCCEEEEecccccccC
Q 028418 172 -----E----------------GF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 172 -----~----------------g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
. ++ ++++|++.|++ +|++||..||+.
T Consensus 439 ~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~ 487 (668)
T PLN02260 439 TGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEY 487 (668)
T ss_pred cCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecC
Confidence 0 11 78999999996 567788888753
No 111
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.29 E-value=2.4e-11 Score=102.13 Aligned_cols=75 Identities=17% Similarity=0.255 Sum_probs=62.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---c-CCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F-GTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~-~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..+.+++|||||+|+||++++++|+++|++|+++.|+++..... . ...++++.+|++|++++.++++ ++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 34668999999999999999999999999999999987644321 1 1146889999999999888774 78
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|+|||+
T Consensus 88 d~vi~~ 93 (264)
T PRK12829 88 DVLVNN 93 (264)
T ss_pred CEEEEC
Confidence 999998
No 112
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.29 E-value=3.3e-11 Score=101.63 Aligned_cols=101 Identities=15% Similarity=0.165 Sum_probs=77.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++||||||+|+||+.++++|+++|++|.++.|++++.... .+..+.++.+|++|++.+.++++ .
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4567999999999999999999999999999999987654321 12347889999999999988876 4
Q ss_pred CcEEEEcC-h-----------------------hH--HHHHH----HhCCCCEEEEeccccccc
Q 028418 164 VRSIICPS-E-----------------------GF--ISNAG----SLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 164 vDaVIh~a-~-----------------------g~--ll~AA----~~aGVkriV~vSS~~Vyg 197 (209)
+|+|||++ . ++ +++++ ++.+.++||++||.....
T Consensus 88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~ 151 (255)
T PRK07523 88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL 151 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc
Confidence 79999982 0 11 33333 345788999999976543
No 113
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.29 E-value=1.6e-11 Score=118.69 Aligned_cols=103 Identities=21% Similarity=0.332 Sum_probs=84.2
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchh-------hhcC-CceEEEEccCCCHHHHHHhhcC--
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM-------ESFG-TYVESMAGDASNKKFLKTALRG-- 163 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~-------~~~~-~~vevv~GDl~D~~sL~~AL~G-- 163 (209)
....+++||||||+|-||+.+++++++.+ .+++.+.|++.+.- ..++ ..+.++.||+.|.+.+..+|++
T Consensus 246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~k 325 (588)
T COG1086 246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHK 325 (588)
T ss_pred hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCC
Confidence 35668899999999999999999999987 46788888875431 1122 4567899999999999999999
Q ss_pred CcEEEEcC--------------------hhH--HHHHHHhCCCCEEEEeccccccc
Q 028418 164 VRSIICPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 164 vDaVIh~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
+|+|||++ .|+ +++||.++||++||++|+-.+-.
T Consensus 326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~ 381 (588)
T COG1086 326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVN 381 (588)
T ss_pred CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccC
Confidence 99999982 133 89999999999999999965433
No 114
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.29 E-value=4.1e-11 Score=102.15 Aligned_cols=100 Identities=13% Similarity=0.120 Sum_probs=77.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...+++|||||+|+||++++++|+++|++|+++.|++++.... .+..+.++.+|++|++++.++++ .
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3467999999999999999999999999999999987654321 13457889999999999987765 6
Q ss_pred CcEEEEcC-------------h-----------hH--HHHHHH-----hCCCCEEEEecccccc
Q 028418 164 VRSIICPS-------------E-----------GF--ISNAGS-----LKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll~AA~-----~aGVkriV~vSS~~Vy 196 (209)
+|+|||++ . ++ +.+++. ..+..+||++||....
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~ 151 (263)
T PRK07814 88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGR 151 (263)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccccc
Confidence 79999972 0 01 344443 2566899999996543
No 115
>PRK06196 oxidoreductase; Provisional
Probab=99.29 E-value=2e-11 Score=107.46 Aligned_cols=98 Identities=17% Similarity=0.171 Sum_probs=77.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC--CceEEEEccCCCHHHHHHhhc-------CCcEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRSII 168 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~--~~vevv~GDl~D~~sL~~AL~-------GvDaVI 168 (209)
..++||||||||+||++++++|+++|++|+++.|++++...... ..++++.+|++|++++.++++ ++|+||
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 45799999999999999999999999999999998866532211 247899999999999887763 689999
Q ss_pred EcC-----------h-----------hH------HHHHHHhCCCCEEEEeccccc
Q 028418 169 CPS-----------E-----------GF------ISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 169 h~a-----------~-----------g~------ll~AA~~aGVkriV~vSS~~V 195 (209)
|++ . ++ ++.++++.+..|||++||.+.
T Consensus 105 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~ 159 (315)
T PRK06196 105 NNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGH 159 (315)
T ss_pred ECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHh
Confidence 972 0 11 344566677789999999754
No 116
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.28 E-value=3.8e-11 Score=105.33 Aligned_cols=101 Identities=16% Similarity=0.166 Sum_probs=79.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++||||||+|+||++++++|+++|++|.+++|+.+..... .+..+.++.+|++|++++.++++ .
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3457899999999999999999999999999999987654321 13347789999999999988887 7
Q ss_pred CcEEEEcC---------h-----------------hH------HHHHHHhCCCCEEEEeccccccc
Q 028418 164 VRSIICPS---------E-----------------GF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 164 vDaVIh~a---------~-----------------g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
+|+|||++ + +. ++..+++.+..+||++||.+++.
T Consensus 118 id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 183 (293)
T PRK05866 118 VDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLS 183 (293)
T ss_pred CCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC
Confidence 89999982 0 00 22334577889999999987654
No 117
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.28 E-value=3.2e-11 Score=101.65 Aligned_cols=97 Identities=18% Similarity=0.150 Sum_probs=76.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh----cCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~----~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
++++|||||||+||++++++|+++|++|.+++|++++.... ....++++.+|+.|++++.+++. ++|.|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45899999999999999999999999999999988654321 22458899999999999988876 47999
Q ss_pred EEcC-------------h-----------hH--HH----HHHHhCCCCEEEEeccccc
Q 028418 168 ICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 168 Ih~a-------------~-----------g~--ll----~AA~~aGVkriV~vSS~~V 195 (209)
||++ + +. ++ ..+++.+.++||++||...
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 139 (257)
T PRK07074 82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNG 139 (257)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhh
Confidence 9982 0 00 22 3345677889999999643
No 118
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.28 E-value=4.1e-11 Score=101.15 Aligned_cols=100 Identities=15% Similarity=0.105 Sum_probs=76.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh--h---hcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--E---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~--~---~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
..+++|||||+|+||++++++|+++|++|.++.|++.... . ..+..+.++.+|++|++++.++++ ++|
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence 4578999999999999999999999999999999753211 1 123457789999999988877765 679
Q ss_pred EEEEcCh-------------------------hH------HHHHHHhCCCCEEEEeccccccc
Q 028418 166 SIICPSE-------------------------GF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 166 aVIh~a~-------------------------g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
.|||++. ++ +++.+++.+..+||++||...++
T Consensus 87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 149 (260)
T PRK12823 87 VLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG 149 (260)
T ss_pred EEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC
Confidence 9999820 00 34455667788999999987664
No 119
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.27 E-value=8e-11 Score=97.93 Aligned_cols=101 Identities=16% Similarity=0.144 Sum_probs=77.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..+++|||||+|.||++++++|+++|++|.++.|++++.... .+..++++.+|++|++++.++++ ++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 457999999999999999999999999999999987644321 13458899999999999988773 68
Q ss_pred cEEEEcC-h-----------------------hH--HHHH----HHhCCCCEEEEecccccccC
Q 028418 165 RSIICPS-E-----------------------GF--ISNA----GSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 165 DaVIh~a-~-----------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg~ 198 (209)
|+|||++ . ++ ++++ ..+.+..+||++||...+..
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 149 (250)
T PRK12939 86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWG 149 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccC
Confidence 9999982 0 01 2333 33445679999999765443
No 120
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.27 E-value=2.8e-11 Score=110.04 Aligned_cols=102 Identities=15% Similarity=0.164 Sum_probs=80.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCc--EEEEEe-----CCcchhhhc-CCceEEEEccCCCHHHHHHhhc--CCcEEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTR--IKALVK-----DKRNAMESF-GTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~--VraLvR-----~~~~a~~~~-~~~vevv~GDl~D~~sL~~AL~--GvDaVIh 169 (209)
+++||||+.||||+++|+.++.+..+ |.++++ +.+...... .++..+++||+.|.+.+.+.++ .+|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 58999999999999999999998754 455543 112222222 2578999999999999999998 6999999
Q ss_pred cC--------------------hhH--HHHHHHhCCCC-EEEEecccccccCCCC
Q 028418 170 PS--------------------EGF--ISNAGSLKGVQ-HVILLSQRQRWHSSSN 201 (209)
Q Consensus 170 ~a--------------------~g~--ll~AA~~aGVk-riV~vSS~~Vyg~~~~ 201 (209)
.+ .|+ +++|+++...+ ||+++|+-.|||+-..
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~ 135 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGL 135 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccC
Confidence 82 133 89999998875 9999999999998754
No 121
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.26 E-value=5.8e-11 Score=101.56 Aligned_cols=72 Identities=15% Similarity=0.141 Sum_probs=61.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh~ 170 (209)
++++|||||||+||++++++|+++|++|.+++|+..+.......+++++.+|++|++.+.++++ ++|.|||+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 4689999999999999999999999999999998866544333457889999999999887763 67999998
No 122
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.26 E-value=6.3e-11 Score=100.01 Aligned_cols=71 Identities=15% Similarity=0.193 Sum_probs=61.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC-------CcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G-------vDaVIh~ 170 (209)
..+++|||||+|+||++++++|+++|++|.++.|++++ ...+..++++++|+.|++++.++++. +|+|||+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ 82 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNN 82 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 45799999999999999999999999999999998754 12234688999999999999888764 5999997
No 123
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.26 E-value=3.9e-11 Score=111.43 Aligned_cols=100 Identities=19% Similarity=0.248 Sum_probs=80.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCc--chh----h----------hcCCceEEEEccCC------CHHH
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR--NAM----E----------SFGTYVESMAGDAS------NKKF 156 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~--~a~----~----------~~~~~vevv~GDl~------D~~s 156 (209)
++||+||||||+|+++++.|+.+-. +|.|+||..+ .+. . .+..+++++.||+. +...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 4799999999999999999998765 9999999654 111 1 22366999999998 4557
Q ss_pred HHHhhcCCcEEEEc-C----------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 157 LKTALRGVRSIICP-S----------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 157 L~~AL~GvDaVIh~-a----------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+.+.-+.+|.|||+ + .|+ +++.|.....|.+.|+||++|+...
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~ 142 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETE 142 (382)
T ss_pred HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeecccc
Confidence 77777889999999 2 233 7888888889999999999997544
No 124
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.26 E-value=6e-11 Score=98.22 Aligned_cols=97 Identities=20% Similarity=0.222 Sum_probs=74.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe-CCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR-~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
+++|||||||+||++++++|+++|++|.++.| ++..... ..+.++.++.+|++|++.+.++++ .+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 47999999999999999999999999999998 4433221 123458899999999998877764 479
Q ss_pred EEEEcC-h-----------------------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 166 SIICPS-E-----------------------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 166 aVIh~a-~-----------------------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.|||++ . +. ++.++++.++++||++||....
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~ 141 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQ 141 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc
Confidence 999982 0 00 3445567788999999996543
No 125
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.26 E-value=4.8e-11 Score=100.16 Aligned_cols=73 Identities=10% Similarity=0.150 Sum_probs=61.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..++||||||||+||++++++|+++|++|.++.|++...... .+..++++..|++|++++.++++ .+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 357899999999999999999999999999999987654321 13457899999999999887764 57
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|+|||+
T Consensus 84 d~vi~~ 89 (258)
T PRK07890 84 DALVNN 89 (258)
T ss_pred cEEEEC
Confidence 999998
No 126
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.26 E-value=4.3e-11 Score=99.52 Aligned_cols=73 Identities=22% Similarity=0.296 Sum_probs=61.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC-CceEEEEccCCCHHHHHHhhc---CCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR---GVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL~---GvDaVIh~ 170 (209)
..++++||||+|+||+++++.|+++|++|+++.|++++...... .+++++.+|++|++.+.++++ .+|+|||+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ 84 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC 84 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence 45799999999999999999999999999999998866533211 236789999999999988886 48999998
No 127
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.26 E-value=7.3e-11 Score=99.76 Aligned_cols=101 Identities=12% Similarity=0.178 Sum_probs=77.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
+++||||||+|+||++++++|+++|++|.+++|++.+.... .+..+.++.+|++|++.+.++++ ++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 35899999999999999999999999999999987553211 23467889999999999988876 689
Q ss_pred EEEEcC---------hh----------------H--HHHHHH---hCCCCEEEEecccccccCC
Q 028418 166 SIICPS---------EG----------------F--ISNAGS---LKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 166 aVIh~a---------~g----------------~--ll~AA~---~aGVkriV~vSS~~Vyg~~ 199 (209)
+|||++ .. + +++++. ..+..+||++||...+...
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~ 144 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV 144 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC
Confidence 999982 00 0 234442 2345899999998776544
No 128
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.25 E-value=7.2e-11 Score=100.67 Aligned_cols=102 Identities=15% Similarity=0.174 Sum_probs=77.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh----c----CCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----F----GTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~----~----~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
.++++|||||+|+||+++++.|+++|++|.++.|++++.... . ..++.++.+|++|++.+.++++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 357999999999999999999999999999999987553211 1 2357889999999999988876
Q ss_pred CCcEEEEcC--h-----------------------hH--HHHHH----HhCCCCEEEEecccccccCC
Q 028418 163 GVRSIICPS--E-----------------------GF--ISNAG----SLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 GvDaVIh~a--~-----------------------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~ 199 (209)
.+|.|||++ . +. +++++ .+.+-.+||++||...+...
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~ 153 (276)
T PRK05875 86 RLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH 153 (276)
T ss_pred CCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC
Confidence 689999982 0 00 23333 33455799999998776543
No 129
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.25 E-value=8.6e-11 Score=99.38 Aligned_cols=103 Identities=15% Similarity=0.165 Sum_probs=78.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--------cCCceEEEEccCCCHHHHHHhhc------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--------~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
...+++|||||+|+||++++++|+++|++|.++.|+++..... .+..+.++++|++|++.+.++++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3467899999999999999999999999999999987654321 23457889999999999988875
Q ss_pred -CCcEEEEcC-------------h-----------hH--HHH----HHHhCCCCEEEEecccccccCC
Q 028418 163 -GVRSIICPS-------------E-----------GF--ISN----AGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 -GvDaVIh~a-------------~-----------g~--ll~----AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.+|++||++ . +. +++ ..++.+..+||++||...+...
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 152 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII 152 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC
Confidence 689999982 0 00 222 3345667899999998665443
No 130
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.25 E-value=8.8e-11 Score=97.40 Aligned_cols=100 Identities=18% Similarity=0.154 Sum_probs=77.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhh------hcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~------~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
+++|||||+|+||++++++|+++|++|.++.|+... ... ..+..+.++.+|++|++++.++++ .+|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999999999998532 111 112358899999999999888875 479
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 166 SIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 166 aVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+|||++ + +. +++++++.+..+||++||...+...
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~ 146 (245)
T PRK12824 83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ 146 (245)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC
Confidence 999982 0 11 2455567788999999998766443
No 131
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.24 E-value=1.2e-10 Score=97.44 Aligned_cols=98 Identities=11% Similarity=0.096 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC-------CcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G-------vDaVIh 169 (209)
..++++|||||+|+||++++++|+++|++|.+++|+.. ...+..++++++|++|++++.++++. +|.|||
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL---TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN 82 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh---hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 34579999999999999999999999999999999871 22244588999999999999998864 799999
Q ss_pred cC----h--------------------hH--HHHHH----HhCCCCEEEEeccccccc
Q 028418 170 PS----E--------------------GF--ISNAG----SLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 170 ~a----~--------------------g~--ll~AA----~~aGVkriV~vSS~~Vyg 197 (209)
++ . +. +++++ ++.+-.+||++||.....
T Consensus 83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~ 140 (252)
T PRK08220 83 AAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV 140 (252)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc
Confidence 82 0 00 33333 445677999999976543
No 132
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.24 E-value=4.5e-11 Score=122.97 Aligned_cols=100 Identities=18% Similarity=0.248 Sum_probs=80.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC----CcEEEEEeCCcchhh--h--------------cCCceEEEEccCCC-----
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAME--S--------------FGTYVESMAGDASN----- 153 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G----~~VraLvR~~~~a~~--~--------------~~~~vevv~GDl~D----- 153 (209)
.++|||||||||+|++++++|+.++ ++|++++|+...... . +..+++++.+|+++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4689999999999999999999887 899999997643211 0 11368999999974
Q ss_pred -HHHHHHhhcCCcEEEEcC-----------------hhH--HHHHHHhCCCCEEEEecccccccC
Q 028418 154 -KKFLKTALRGVRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 154 -~~sL~~AL~GvDaVIh~a-----------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.+.+.+++.++|+|||++ .|+ ++++|.+.++++|||+||.++|+.
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~ 1115 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDT 1115 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCc
Confidence 466778888999999982 122 788999999999999999999863
No 133
>PRK07069 short chain dehydrogenase; Validated
Probab=99.24 E-value=9.5e-11 Score=97.77 Aligned_cols=100 Identities=7% Similarity=0.103 Sum_probs=75.3
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeC-Ccchhhh---c----C-CceEEEEccCCCHHHHHHhhc-------CC
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES---F----G-TYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~-~~~a~~~---~----~-~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
++|||||+|+||+++++.|+++|++|+++.|+ .+..... + . ..+..+++|++|++++.++++ ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 48999999999999999999999999999998 4332211 1 1 123468899999999877764 67
Q ss_pred cEEEEcC-------------hh-----------------HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 165 RSIICPS-------------EG-----------------FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a-------------~g-----------------~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|.|||++ .. .+++++++.+.++||++||...+....
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~ 146 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEP 146 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCC
Confidence 9999982 00 045566777889999999987765443
No 134
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.23 E-value=4.8e-11 Score=112.00 Aligned_cols=102 Identities=23% Similarity=0.336 Sum_probs=74.2
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC-----CceEEEEccCCCHHHHHHhhc-----CC
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALR-----GV 164 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~-----~~vevv~GDl~D~~sL~~AL~-----Gv 164 (209)
.....+.|||+||||.+|+.+++.|+++|+.||+++|+.+++...++ .....+..|...+.+...-+. ++
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~ 154 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGV 154 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccc
Confidence 34445689999999999999999999999999999999998876644 234455555544443333332 33
Q ss_pred cEEEEcC-----------------hhH--HHHHHHhCCCCEEEEecccccc
Q 028418 165 RSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 165 DaVIh~a-----------------~g~--ll~AA~~aGVkriV~vSS~~Vy 196 (209)
..++.+. .|+ +++||+.+||+|||++|+++..
T Consensus 155 ~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~ 205 (411)
T KOG1203|consen 155 VIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGT 205 (411)
T ss_pred eeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCc
Confidence 3455441 122 8999999999999999988653
No 135
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.23 E-value=5.8e-11 Score=104.57 Aligned_cols=73 Identities=12% Similarity=0.203 Sum_probs=61.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||.+++++|+++|++|+++.|+.++.... .+..++++.+|++|++++.++++ .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 467899999999999999999999999999999987654321 12357899999999999988875 38
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 85 D~li~n 90 (322)
T PRK07453 85 DALVCN 90 (322)
T ss_pred cEEEEC
Confidence 999997
No 136
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.23 E-value=1.5e-10 Score=97.29 Aligned_cols=99 Identities=19% Similarity=0.286 Sum_probs=75.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
...+++|||||+|+||++++++|+++|++|.++.|++.... ...+..+.++..|++|++.+.++++ .+|+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 34579999999999999999999999999999999875422 1223346789999999998888775 5799
Q ss_pred EEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEeccccc
Q 028418 167 IICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQR 195 (209)
Q Consensus 167 VIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~V 195 (209)
|||++ . +. ++++ +++.+..|||++||...
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 151 (255)
T PRK06841 93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAG 151 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhh
Confidence 99982 0 11 2333 34457889999999754
No 137
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.23 E-value=1.2e-10 Score=100.08 Aligned_cols=103 Identities=15% Similarity=0.131 Sum_probs=80.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhc------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~------Gv 164 (209)
.++++|||||+|.||++++++|+++|++|.++.|+.++.... .+.+++++.+|++|++++.++++ ++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 467899999999999999999999999999999987654211 13458899999999999988875 57
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 165 RSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|.+||++ + +. ++..+++.+..+||++||.......+
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~ 152 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIP 152 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCC
Confidence 9999882 0 00 34555667778999999987654433
No 138
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.22 E-value=1.8e-10 Score=96.65 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=58.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h---h---hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---E---SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~---~---~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
++++|||||+|+||++++++|.++|++|.++.|+.... . . ..+..+.++.+|++|++++.++++ .+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 36799999999999999999999999999999865321 1 1 123458899999999998887764 57
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|+|||+
T Consensus 82 d~vi~~ 87 (256)
T PRK12745 82 DCLVNN 87 (256)
T ss_pred CEEEEC
Confidence 999998
No 139
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.22 E-value=1.2e-10 Score=104.35 Aligned_cols=104 Identities=12% Similarity=0.200 Sum_probs=81.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++||||||||+||++++++|+++|++|+++.|++++... ..+..+.++.+|++|++++.++++ .
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 345789999999999999999999999999999998765432 123457889999999999988864 6
Q ss_pred CcEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 164 VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|.+||++ + +. ++..+++.+..+||++||...+...+
T Consensus 86 iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~ 152 (334)
T PRK07109 86 IDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIP 152 (334)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCC
Confidence 89999982 0 01 34556667778999999988776543
No 140
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.22 E-value=3.1e-11 Score=106.36 Aligned_cols=85 Identities=14% Similarity=0.191 Sum_probs=69.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC--CcEEEEcC------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS------ 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~a------ 171 (209)
|+||||||+|++|++|++.|.++|++|.++.|+ ..|++|++.+.+.++. .|+|||++
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~ 65 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVD 65 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------CS-TTSHHHHHHHHHHH--SEEEE------HH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------hcCCCCHHHHHHHHHHhCCCeEeccceeecHH
Confidence 689999999999999999999999999999765 6689999999999874 69999992
Q ss_pred --------------hh--HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 --------------EG--FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 --------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+ .++++|.+.|+ |+||+||..||.+..
T Consensus 66 ~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~ 109 (286)
T PF04321_consen 66 ACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDK 109 (286)
T ss_dssp HHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SST
T ss_pred hhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCc
Confidence 01 27888988886 899999999996653
No 141
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.22 E-value=1.7e-10 Score=96.53 Aligned_cols=102 Identities=16% Similarity=0.261 Sum_probs=76.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h---hhcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~---~~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
..++||||||+|+||++++++|+++|++|.++.|+.... . ...+..+.++.+|++|++++.++++ ++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 467999999999999999999999999999999876321 1 1223457899999999999887664 5899
Q ss_pred EEEcC-------------h-----------hH--HHHHH----HhCC-CCEEEEecccccccCC
Q 028418 167 IICPS-------------E-----------GF--ISNAG----SLKG-VQHVILLSQRQRWHSS 199 (209)
Q Consensus 167 VIh~a-------------~-----------g~--ll~AA----~~aG-VkriV~vSS~~Vyg~~ 199 (209)
|||++ . +. +++++ .+.+ -.+||++||...+...
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~ 147 (248)
T TIGR01832 84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG 147 (248)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC
Confidence 99982 0 00 23333 2344 5799999998776543
No 142
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.21 E-value=2e-10 Score=97.28 Aligned_cols=102 Identities=12% Similarity=0.180 Sum_probs=78.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc--hhh---hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AME---SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~--a~~---~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
...+++|||||+|+||+.++++|+++|++|.++.|+... ... ..+..++++.+|++|.+.+.++++ .+
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 456799999999999999999999999999999988321 111 123468899999999999988876 67
Q ss_pred cEEEEcC------------h------------hH------HHHHHHhCCCCEEEEecccccccC
Q 028418 165 RSIICPS------------E------------GF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 165 DaVIh~a------------~------------g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
|.+||++ . +. ++..+++.+..+||++||...+..
T Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 156 (258)
T PRK06935 93 DILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG 156 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC
Confidence 9999982 0 00 234455667789999999876644
No 143
>PRK05717 oxidoreductase; Validated
Probab=99.21 E-value=1.6e-10 Score=97.69 Aligned_cols=73 Identities=16% Similarity=0.237 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
.++++|||||+|+||++++++|+++|++|.++.|++.+... ..+..+.++.+|++|++++.++++ .+|.|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 88 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL 88 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 35789999999999999999999999999999887654322 233467899999999998876654 47999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 89 i~~ 91 (255)
T PRK05717 89 VCN 91 (255)
T ss_pred EEC
Confidence 998
No 144
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.21 E-value=1.4e-10 Score=97.65 Aligned_cols=101 Identities=13% Similarity=0.109 Sum_probs=78.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhcC-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG------- 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~G------- 163 (209)
...++||||||+|+||+.++++|+++|++|.++.|+++.... ..+..+.++.+|++|++.+.++++.
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 457899999999999999999999999999999998754322 1234588999999999999888763
Q ss_pred CcEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEeccccccc
Q 028418 164 VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
+|.|||++ . ++ +++++.+.+..+||++||.....
T Consensus 89 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~ 152 (256)
T PRK06124 89 LDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQV 152 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhcc
Confidence 58999971 0 00 23445557889999999976543
No 145
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.21 E-value=2.3e-10 Score=96.59 Aligned_cols=99 Identities=19% Similarity=0.212 Sum_probs=77.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh-------cCCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL-------~GvDaVIh 169 (209)
...+++|||||+|+||++++++|.++|++|.++.|+.... ....+.++++|++|++.+.+++ ..+|.|||
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 83 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH 83 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4567999999999999999999999999999999987542 2345789999999999877654 46799999
Q ss_pred cC------h--------------------hH------HHHHHHhCCCCEEEEecccccccC
Q 028418 170 PS------E--------------------GF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 170 ~a------~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
++ . +. +++.+++.+..+||++||...+..
T Consensus 84 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~ 144 (260)
T PRK06523 84 VLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP 144 (260)
T ss_pred CCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC
Confidence 72 0 00 234455667789999999876644
No 146
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.21 E-value=1.4e-10 Score=97.58 Aligned_cols=103 Identities=16% Similarity=0.157 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhcC-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG-------V 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~G-------v 164 (209)
..++||||||+|+||++++++|+++|++|.++.|++++... ..+..++++.+|++|++++.++++. +
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 45799999999999999999999999999999998765321 1234588999999999999887764 5
Q ss_pred cEEEEcC----h---------------------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 165 RSIICPS----E---------------------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a----~---------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|+|||++ . +. ++....+.+..+||++||...+....
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~ 152 (253)
T PRK06172 86 DYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAP 152 (253)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC
Confidence 9999982 0 00 12234456678999999987765443
No 147
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.21 E-value=1.4e-10 Score=100.56 Aligned_cols=103 Identities=17% Similarity=0.135 Sum_probs=77.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..++++|||||+|+||++++++|+++|++|.+..|+.+..... .+..+.++.+|++|++++.++++ .
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4567899999999999999999999999999999987554321 13357889999999999988875 4
Q ss_pred CcEEEEcC-------------h-----------hH--HHHH----HHhCC-CCEEEEecccccccCC
Q 028418 164 VRSIICPS-------------E-----------GF--ISNA----GSLKG-VQHVILLSQRQRWHSS 199 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll~A----A~~aG-VkriV~vSS~~Vyg~~ 199 (209)
+|.|||++ + +. ++++ +.+.+ -.+||++||...+...
T Consensus 84 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~ 150 (275)
T PRK05876 84 VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN 150 (275)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC
Confidence 69999972 0 11 2333 33444 5799999998766443
No 148
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.20 E-value=1.2e-10 Score=98.78 Aligned_cols=73 Identities=16% Similarity=0.210 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-----cCCceEEEEccCCCHHHHHHhhc------CCcE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR------GVRS 166 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-----~~~~vevv~GDl~D~~sL~~AL~------GvDa 166 (209)
.++++|||||+|+||++++++|+++|++|.+++|++++.... .+.+++++.+|++|++.+.++++ .+|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 356899999999999999999999999999999987654322 13468899999999998877654 5799
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
|||+
T Consensus 84 lv~~ 87 (263)
T PRK09072 84 LINN 87 (263)
T ss_pred EEEC
Confidence 9998
No 149
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.20 E-value=1.9e-10 Score=97.03 Aligned_cols=99 Identities=16% Similarity=0.181 Sum_probs=77.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..+++|||||+|.||++++++|+++|++|.++.|++++.... .+..+.++.+|++|++++.++++ .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 456899999999999999999999999999999987654321 23457889999999999888875 68
Q ss_pred cEEEEcC--------------hh-----------H------HHHHHHhCCCCEEEEecccccc
Q 028418 165 RSIICPS--------------EG-----------F------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 165 DaVIh~a--------------~g-----------~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
|+|||++ +. . ++..+++.+-.+||++||...+
T Consensus 85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~ 147 (254)
T PRK07478 85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGH 147 (254)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhh
Confidence 9999982 00 0 2344566777899999997654
No 150
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.20 E-value=1e-10 Score=96.81 Aligned_cols=98 Identities=15% Similarity=0.240 Sum_probs=76.8
Q ss_pred EEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---c--CCceEEEEccCCCHHHHHHhhcC---CcEEEEcC---
Q 028418 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRG---VRSIICPS--- 171 (209)
Q Consensus 103 LVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~--~~~vevv~GDl~D~~sL~~AL~G---vDaVIh~a--- 171 (209)
|||||+|+||++++++|+++|++|+++.|+++..... . +.+++++.+|++|++++.++++. +|.+||.+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 6999999999999999999999999999987654321 1 34688999999999999999874 69999982
Q ss_pred -h--------------------hH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 -E--------------------GF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 -~--------------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
. +. ++++....+..+||++||.+.+...+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~ 132 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSA 132 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCC
Confidence 0 00 34444455678999999988875543
No 151
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.20 E-value=1.5e-10 Score=95.36 Aligned_cols=96 Identities=19% Similarity=0.277 Sum_probs=72.0
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc-chh----h--hcCCceEEEEccCCCHHHHHHhhcC-------CcEE
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAM----E--SFGTYVESMAGDASNKKFLKTALRG-------VRSI 167 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~-~a~----~--~~~~~vevv~GDl~D~~sL~~AL~G-------vDaV 167 (209)
|||||++|+||++++++|+++|++|+++.|+.. ... . ..+..+.++.+|++|++++.+++++ +|.|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 689999999999999999999999999998762 211 1 1123478899999999999888764 5999
Q ss_pred EEcC-------------h-----------hH--HHHHHH----hCCCCEEEEecccc-ccc
Q 028418 168 ICPS-------------E-----------GF--ISNAGS----LKGVQHVILLSQRQ-RWH 197 (209)
Q Consensus 168 Ih~a-------------~-----------g~--ll~AA~----~aGVkriV~vSS~~-Vyg 197 (209)
||++ . ++ +++++. +.+.++||++||.+ +++
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g 141 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMG 141 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCC
Confidence 9971 0 01 344443 36778999999964 444
No 152
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.19 E-value=2.5e-10 Score=96.22 Aligned_cols=74 Identities=16% Similarity=0.198 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-----hhcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-----~~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..++++|||||+|+||++++++|+++|++|++++|++++.. ...+.+++++.+|++|++++.++++ ++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 34579999999999999999999999999999999886531 1124468899999999999988885 57
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 85 d~vi~~ 90 (258)
T PRK08628 85 DGLVNN 90 (258)
T ss_pred CEEEEC
Confidence 999998
No 153
>PRK08643 acetoin reductase; Validated
Probab=99.19 E-value=1.9e-10 Score=96.80 Aligned_cols=72 Identities=17% Similarity=0.238 Sum_probs=60.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
++++|||||+|+||++++++|+++|++|+++.|++++.... .+..+.++++|++|++++.++++ ++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999999987543211 13457889999999998888775 579
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
+|||+
T Consensus 82 ~vi~~ 86 (256)
T PRK08643 82 VVVNN 86 (256)
T ss_pred EEEEC
Confidence 99998
No 154
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.18 E-value=2.8e-10 Score=97.34 Aligned_cols=73 Identities=16% Similarity=0.205 Sum_probs=60.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..++++||||+|+||++++++|+++|++|.++.|+.+..... .+.++.++++|+.|++.+.++++ .+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 457899999999999999999999999999999987543221 13357889999999998887764 68
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 89 d~li~~ 94 (278)
T PRK08277 89 DILING 94 (278)
T ss_pred CEEEEC
Confidence 999997
No 155
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.18 E-value=2.6e-10 Score=96.17 Aligned_cols=99 Identities=15% Similarity=0.130 Sum_probs=75.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..+++|||||+|+||++++++|+++|++|.+..|++.+.... .+..+.++.+|++|++++.++++ .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 457899999999999999999999999999999987654321 13357788999999999888764 47
Q ss_pred cEEEEcC-------------h-----------hH--HHH----HHHhCCCCEEEEecccccc
Q 028418 165 RSIICPS-------------E-----------GF--ISN----AGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~--ll~----AA~~aGVkriV~vSS~~Vy 196 (209)
|.|||++ . +. +++ .+++.+..+||++||....
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 149 (254)
T PRK08085 88 DVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSE 149 (254)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhc
Confidence 9999982 0 10 223 3344677899999997543
No 156
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.18 E-value=3.7e-10 Score=94.38 Aligned_cols=98 Identities=14% Similarity=0.158 Sum_probs=73.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeC-Ccchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~-~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
++++|||||||+||++++++|+++|++|+++.+. ...... ..+..+..+.+|++|.+.+.++++ .+
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI 82 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999886642 222111 112346778999999999888764 68
Q ss_pred cEEEEcC-h-----------------------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 165 RSIICPS-E-----------------------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 165 DaVIh~a-~-----------------------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
|+|||++ . +. +++.+++.+..+||++||....
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 144 (246)
T PRK12938 83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ 144 (246)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhcc
Confidence 9999982 0 10 3444567788999999997543
No 157
>PRK09242 tropinone reductase; Provisional
Probab=99.18 E-value=2.3e-10 Score=96.59 Aligned_cols=102 Identities=12% Similarity=0.160 Sum_probs=77.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--------CCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--------~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..+++|||||+|.||++++++|.++|++|+++.|+.+...... +..+.++.+|++|++++.++++
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4679999999999999999999999999999999876543211 2357889999999988766654
Q ss_pred CCcEEEEcC-h-----------------------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 163 GVRSIICPS-E-----------------------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 GvDaVIh~a-~-----------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
.+|.|||++ . +. ++++ .++.+..+||++||...+...
T Consensus 88 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~ 154 (257)
T PRK09242 88 GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV 154 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC
Confidence 579999982 0 11 3333 345677899999998765543
No 158
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.17 E-value=3.9e-10 Score=94.29 Aligned_cols=99 Identities=17% Similarity=0.168 Sum_probs=73.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeC-Ccchhh------hcCCceEEEEccCCCHHHHHHhhcC-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAME------SFGTYVESMAGDASNKKFLKTALRG------- 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~-~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~G------- 163 (209)
..+++|||||+|+||++++++|+++|++|.++.++ +..... ..+..+.++.+|++|++++.++++.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35799999999999999999999999999876653 332211 1123578899999999999988865
Q ss_pred CcEEEEcC-------------h-----------hH--HHHHHH----hCCCCEEEEecccccc
Q 028418 164 VRSIICPS-------------E-----------GF--ISNAGS----LKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll~AA~----~aGVkriV~vSS~~Vy 196 (209)
+|+|||++ . ++ +++++. +.+..+||++||...+
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 147 (247)
T PRK12935 85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQ 147 (247)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhc
Confidence 69999982 0 01 334433 3456799999997554
No 159
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.17 E-value=2.7e-10 Score=96.33 Aligned_cols=100 Identities=15% Similarity=0.193 Sum_probs=76.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
..+++|||||+|+||++++++|+++|++|.++.|+.+.. ......++.++.+|++|++++.++++ .+|.|||
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 357899999999999999999999999999887755432 22222357899999999999988875 5799999
Q ss_pred cC------------------------hhH------HHHHHHhCCCCEEEEeccccccc
Q 028418 170 PS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 170 ~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
++ .+. +++.+++.+..+||++||...++
T Consensus 86 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~ 143 (255)
T PRK06463 86 NAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIG 143 (255)
T ss_pred CCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCC
Confidence 82 011 34445556778999999987664
No 160
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.17 E-value=4.7e-10 Score=93.24 Aligned_cols=73 Identities=12% Similarity=0.167 Sum_probs=60.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h------hhcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~------~~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++|||||+|+||+++++.|+++|++|.++.|+.... . ...+..+.++..|++|++++.++++ +
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999998888755321 1 1123468899999999999998886 6
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|+|||+
T Consensus 84 id~vi~~ 90 (245)
T PRK12937 84 IDVLVNN 90 (245)
T ss_pred CCEEEEC
Confidence 8999998
No 161
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.16 E-value=4.7e-10 Score=96.00 Aligned_cols=99 Identities=15% Similarity=0.163 Sum_probs=75.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcc-hhh----h---cCCceEEEEccCCCHHHHHHhhc-----
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN-AME----S---FGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~-a~~----~---~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
...++||||||||+||++++++|+++| ++|.+++|++++ ... . ...+++++.+|+.|++++.++++
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence 345689999999999999999999995 999999998875 221 1 12368899999999998665543
Q ss_pred -CCcEEEEcC-----------h-------------h------HHHHHHHhCCCCEEEEeccccc
Q 028418 163 -GVRSIICPS-----------E-------------G------FISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 163 -GvDaVIh~a-----------~-------------g------~ll~AA~~aGVkriV~vSS~~V 195 (209)
++|.+|+++ . + .+++++++.+..+||++||...
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g 149 (253)
T PRK07904 86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAG 149 (253)
T ss_pred CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhh
Confidence 689998761 0 0 0455677788899999999764
No 162
>PRK08589 short chain dehydrogenase; Validated
Probab=99.16 E-value=5e-10 Score=96.30 Aligned_cols=100 Identities=17% Similarity=0.137 Sum_probs=75.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..++++|||||+|+||++++++|+++|++|.++.|+ +.... ..+.++.++.+|++|++++.++++ .
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 346799999999999999999999999999999998 43321 113457899999999998887765 4
Q ss_pred CcEEEEcC----h---------------------hH------HHHHHHhCCCCEEEEecccccccC
Q 028418 164 VRSIICPS----E---------------------GF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 164 vDaVIh~a----~---------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
+|.+||++ . +. ++..+++.+ .+||++||...+..
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~ 147 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAA 147 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCC
Confidence 79999982 0 00 233445555 79999999876543
No 163
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.16 E-value=2.4e-10 Score=96.48 Aligned_cols=72 Identities=15% Similarity=0.199 Sum_probs=61.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVI 168 (209)
.+++|||||+|+||++++++|+++|++|.++.|+.+.... .....++++.+|++|++++.++++ .+|+||
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 85 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILF 85 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999999999999999999999999999998865432 223458899999999999988876 579999
Q ss_pred Ec
Q 028418 169 CP 170 (209)
Q Consensus 169 h~ 170 (209)
|+
T Consensus 86 ~~ 87 (257)
T PRK07067 86 NN 87 (257)
T ss_pred EC
Confidence 98
No 164
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.15 E-value=5.3e-10 Score=95.37 Aligned_cols=74 Identities=23% Similarity=0.298 Sum_probs=62.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
...+++|||||||.||++++++|+++|++|.++.|++++... ..+..+.++++|++|++++.++++ .+|.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 346799999999999999999999999999999998764332 234468899999999999988775 5699
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
|||+
T Consensus 84 lv~~ 87 (261)
T PRK08265 84 LVNL 87 (261)
T ss_pred EEEC
Confidence 9998
No 165
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.15 E-value=2.1e-10 Score=95.85 Aligned_cols=93 Identities=14% Similarity=0.082 Sum_probs=74.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---c--CCceEEEEccCCCHHHHHHhhcC-------CcEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRG-------VRSI 167 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~--~~~vevv~GDl~D~~sL~~AL~G-------vDaV 167 (209)
|+++|||||||+|. +++.|.++|++|+++.|+++.+... . ...++++.+|++|++++.+++++ +|.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 57999999999886 9999999999999999987654322 1 24578899999999999988753 4677
Q ss_pred EEc--C--hhHHHHHHHhCCCC----EEEEeccc
Q 028418 168 ICP--S--EGFISNAGSLKGVQ----HVILLSQR 193 (209)
Q Consensus 168 Ih~--a--~g~ll~AA~~aGVk----riV~vSS~ 193 (209)
|+. . ...+..+|++.||+ ||||+=..
T Consensus 80 v~~vh~~~~~~~~~~~~~~gv~~~~~~~~h~~gs 113 (177)
T PRK08309 80 VAWIHSSAKDALSVVCRELDGSSETYRLFHVLGS 113 (177)
T ss_pred EEeccccchhhHHHHHHHHccCCCCceEEEEeCC
Confidence 765 2 33489999999999 99998433
No 166
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.15 E-value=3.9e-10 Score=94.68 Aligned_cols=74 Identities=15% Similarity=0.146 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...++||||||+|+||++++++|.++|++|+++.|++++.... ....+.++.+|+++++.+.++++ .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4468999999999999999999999999999999988664321 12357899999999999988876 5
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.|||+
T Consensus 87 ~d~li~~ 93 (258)
T PRK06949 87 IDILVNN 93 (258)
T ss_pred CCEEEEC
Confidence 7999998
No 167
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.15 E-value=4.9e-10 Score=95.43 Aligned_cols=97 Identities=11% Similarity=0.093 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||++++++|+++|++|.++.|++++.... .+..+.++.+|++|++++.+++. .+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 457899999999999999999999999999999887654321 13457889999999999988874 47
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccc
Q 028418 165 RSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~ 194 (209)
|+|||++ . +. ++..+++.+..+||++||..
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~ 148 (265)
T PRK07097 89 DILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMM 148 (265)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcc
Confidence 9999982 0 10 23345566788999999964
No 168
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.14 E-value=5.2e-10 Score=93.37 Aligned_cols=103 Identities=13% Similarity=0.097 Sum_probs=74.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++||||||+|+||++++++|+++|++|++.+|+... ... ..+..+.++..|++|++++.++++ ++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA 85 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence 4699999999999999999999999999888865422 111 122356788999999998887765 67
Q ss_pred cEEEEcC-h-----------------------hH--HHHHHHhC--CCCEEEEecccccccCCCC
Q 028418 165 RSIICPS-E-----------------------GF--ISNAGSLK--GVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 165 DaVIh~a-~-----------------------g~--ll~AA~~a--GVkriV~vSS~~Vyg~~~~ 201 (209)
|+|||++ . +. +++++.+. ..++||++||...+...++
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~ 150 (252)
T PRK06077 86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYG 150 (252)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCC
Confidence 9999982 0 00 23333321 2368999999887765443
No 169
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.14 E-value=1.9e-10 Score=95.53 Aligned_cols=72 Identities=18% Similarity=0.219 Sum_probs=57.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEE-EeCCcchhh------hcCCceEEEEccCCCHHHHHHhhcC-------C
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG-------V 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraL-vR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~G-------v 164 (209)
++++|||||+|+||++++++|+++|++|+++ .|++++... ..+..+.++.+|++|++++.++++. +
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999999875 465543321 1134578899999999999988764 5
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 81 d~vi~~ 86 (247)
T PRK09730 81 AALVNN 86 (247)
T ss_pred CEEEEC
Confidence 799998
No 170
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.14 E-value=4.1e-10 Score=95.47 Aligned_cols=101 Identities=13% Similarity=0.170 Sum_probs=77.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------c-CCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~-~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..+++|||||+|.||++++++|+++|++|.++.|++++.... . +..+.++.+|++|++++.++++
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 457899999999999999999999999999999987654321 1 1357789999999999877653
Q ss_pred CCcEEEEcC-h-----------------------hH------HHHHHHhCCCCEEEEecccccccC
Q 028418 163 GVRSIICPS-E-----------------------GF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 163 GvDaVIh~a-~-----------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.+|.|||++ . +. ++..+++.+..+||++||...+..
T Consensus 87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 152 (265)
T PRK07062 87 GVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQP 152 (265)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCC
Confidence 579999982 0 00 234455566789999999776543
No 171
>PLN02253 xanthoxin dehydrogenase
Probab=99.14 E-value=5.7e-10 Score=95.55 Aligned_cols=73 Identities=12% Similarity=0.133 Sum_probs=61.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---c--CCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~--~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
.++++|||||+|+||++++++|+++|++|+++.|+.+..... . +.+++++++|++|++++.++++ .+|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 457899999999999999999999999999999876543211 1 2357899999999999998886 689
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.|||+
T Consensus 97 ~li~~ 101 (280)
T PLN02253 97 IMVNN 101 (280)
T ss_pred EEEEC
Confidence 99998
No 172
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.13 E-value=3.8e-10 Score=94.97 Aligned_cols=72 Identities=22% Similarity=0.191 Sum_probs=60.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHHhhcCC----cEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALRGV----RSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~AL~Gv----DaVIh~ 170 (209)
+.++|||||||+||++++++|+++|++|.+++|++++..+.. ..++.++.+|++|++++.++++.+ |.+||.
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ 78 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFN 78 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEc
Confidence 368999999999999999999999999999999876654322 245789999999999999998764 666665
No 173
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.13 E-value=6.6e-10 Score=94.08 Aligned_cols=99 Identities=18% Similarity=0.218 Sum_probs=75.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hh------hcCCceEEEEccCCCHHHHHHhhcC-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-ME------SFGTYVESMAGDASNKKFLKTALRG------- 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~------~~~~~vevv~GDl~D~~sL~~AL~G------- 163 (209)
..+++|||||+|+||++++++|+++|++|.++.|+.++. .. ..+..+.++.+|++|++++.++++.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 457999999999999999999999999999999876432 11 1134578899999999998887753
Q ss_pred CcEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 164 VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+|.|||++ + ++ ++..+++.+-.+||++||...+
T Consensus 87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 149 (254)
T PRK06114 87 LTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGI 149 (254)
T ss_pred CCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhc
Confidence 69999982 0 11 2334456677899999997644
No 174
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.13 E-value=5.2e-10 Score=93.98 Aligned_cols=100 Identities=11% Similarity=0.143 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...+++|||||+|+||.+++++|+++|++|.++.|+.++.... .+..+.+++.|+.|.+.+.++++ .
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3457899999999999999999999999999999987543221 12346789999999998887765 4
Q ss_pred CcEEEEcC-h------------------------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 164 VRSIICPS-E------------------------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a-~------------------------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+|.|||++ . +. +++.+++.+..+||++||....
T Consensus 86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 149 (252)
T PRK07035 86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGV 149 (252)
T ss_pred CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhc
Confidence 79999872 0 11 2334466778999999997544
No 175
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.13 E-value=5e-10 Score=93.80 Aligned_cols=71 Identities=21% Similarity=0.227 Sum_probs=59.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
+++|||||+|+||.+++++|+++|++|.++.|+...... ..+.++.++.+|++|++++.++++ .+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999999999998654321 123457899999999999888764 5799
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
|||+
T Consensus 81 vi~~ 84 (254)
T TIGR02415 81 MVNN 84 (254)
T ss_pred EEEC
Confidence 9998
No 176
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.13 E-value=9.3e-10 Score=93.19 Aligned_cols=74 Identities=18% Similarity=0.271 Sum_probs=59.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc-chhh------hcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~-~a~~------~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..++++|||||+|+||++++++|+++|++|++++|+.. .... ..+..++++.+|++|++++.++++
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 34668999999999999999999999999999887532 2211 123458899999999999988875
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
.+|.|||+
T Consensus 87 ~iD~vi~~ 94 (258)
T PRK09134 87 PITLLVNN 94 (258)
T ss_pred CCCEEEEC
Confidence 47999998
No 177
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.12 E-value=4.6e-10 Score=107.25 Aligned_cols=102 Identities=13% Similarity=0.148 Sum_probs=81.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
++++|||||||+||++++++|+++|++|.+++|+++..... .+..+.++.+|++|++++.++++ ++|
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 450 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD 450 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 56899999999999999999999999999999987654321 13458899999999999998876 689
Q ss_pred EEEEcC-h--------------h-----------H------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 166 SIICPS-E--------------G-----------F------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a-~--------------g-----------~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.|||++ . . . ++..+++.+..+||++||.+++...+
T Consensus 451 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 517 (657)
T PRK07201 451 YLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP 517 (657)
T ss_pred EEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC
Confidence 999972 0 0 0 23344567889999999998876544
No 178
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.12 E-value=6.9e-10 Score=95.02 Aligned_cols=75 Identities=12% Similarity=0.161 Sum_probs=61.6
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
....+++|||||+|+||++++++|+++|++|+++.|+++..... .+.++.++.+|++|++++.++++
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG 85 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 34567999999999999999999999999999999987543211 12356789999999999988775
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
++|.|||+
T Consensus 86 ~iD~vi~~ 93 (264)
T PRK07576 86 PIDVLVSG 93 (264)
T ss_pred CCCEEEEC
Confidence 46999987
No 179
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.12 E-value=6.6e-10 Score=85.76 Aligned_cols=96 Identities=21% Similarity=0.280 Sum_probs=73.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhh---------hcCCceEEEEccCCCHHHHHHhhcC------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALRG------ 163 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~---------~~~~~vevv~GDl~D~~sL~~AL~G------ 163 (209)
++++||||+|+||.+++++|+++|+ .|.++.|++.+... ..+..+.++..|+++++.+.+++..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999996 57777887654321 1234577899999999988877653
Q ss_pred -CcEEEEcC-------------h-----------hH--HHHHHHhCCCCEEEEeccccc
Q 028418 164 -VRSIICPS-------------E-----------GF--ISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 164 -vDaVIh~a-------------~-----------g~--ll~AA~~aGVkriV~vSS~~V 195 (209)
+|.|||++ . ++ +++++++.+.+++|++||...
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~ 139 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAG 139 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHH
Confidence 59999972 0 11 567777788899999999654
No 180
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.12 E-value=5.7e-10 Score=93.49 Aligned_cols=65 Identities=15% Similarity=0.248 Sum_probs=53.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hh---hhcCCceEEEEccCCCHHHHHHhhcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM---ESFGTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~---~~~~~~vevv~GDl~D~~sL~~AL~G 163 (209)
++++|||||+|+||+.++++|+++|++|.++.|++.+ .. ...+.+++++.+|++|++.+.++++.
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 69 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNE 69 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHH
Confidence 4689999999999999999999999999999998732 21 11234688999999999999888753
No 181
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.11 E-value=9.6e-10 Score=91.60 Aligned_cols=73 Identities=16% Similarity=0.220 Sum_probs=59.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhh-------cCCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTAL-------RGVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL-------~GvDaV 167 (209)
.++++|||||+|+||++++++|+++|++|.++.|+.+.... ..+..+.++++|++|.+.+.+++ ..+|+|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 45799999999999999999999999999999998654322 23445788999999998776554 368999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 85 i~~ 87 (249)
T PRK06500 85 FIN 87 (249)
T ss_pred EEC
Confidence 998
No 182
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.11 E-value=1.1e-09 Score=92.45 Aligned_cols=72 Identities=15% Similarity=0.258 Sum_probs=59.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cC-CceEEEEccCCCHHHHHHhhc-------C
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~-~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++||||||+|+||+++++.|.++|++|+++.|+....... .+ ..++++.+|++|++.+..+++ .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35899999999999999999999999999999987543211 11 358899999999998887764 5
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|+|||+
T Consensus 82 id~vv~~ 88 (259)
T PRK12384 82 VDLLVYN 88 (259)
T ss_pred CCEEEEC
Confidence 7999998
No 183
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.11 E-value=1.3e-09 Score=91.86 Aligned_cols=104 Identities=8% Similarity=0.122 Sum_probs=77.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
...++|+||||+|+||++++++|+++|++ |.++.|++++... ..+..+.++.+|++|++++.++++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 34578999999999999999999999999 9999998654331 123457789999999999888765
Q ss_pred CCcEEEEcC-h-----------------------hH--HHHHH----HhCC-CCEEEEecccccccCCC
Q 028418 163 GVRSIICPS-E-----------------------GF--ISNAG----SLKG-VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 GvDaVIh~a-~-----------------------g~--ll~AA----~~aG-VkriV~vSS~~Vyg~~~ 200 (209)
++|.|||++ . +. +++++ .+.+ -.+||++||...++..+
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~ 152 (260)
T PRK06198 84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP 152 (260)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC
Confidence 579999982 0 00 23333 2332 46899999988776543
No 184
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.11 E-value=1.1e-09 Score=90.86 Aligned_cols=97 Identities=13% Similarity=0.140 Sum_probs=73.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH-HHHHHhhcCCcEEEEcC----h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTALRGVRSIICPS----E 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~-~sL~~AL~GvDaVIh~a----~ 172 (209)
..+++|||||+|+||++++++|+++|++|.++.|++... ...++.++.+|++|+ +.+.+.+..+|+|||++ .
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~~ 80 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---LSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILDD 80 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---cCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCCC
Confidence 357899999999999999999999999999999986542 134578999999998 55555566889999982 0
Q ss_pred ---------------------hH--HHHH----HHhCCCCEEEEeccccccc
Q 028418 173 ---------------------GF--ISNA----GSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 173 ---------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg 197 (209)
++ ++++ .++.+-.+||++||...+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 132 (235)
T PRK06550 81 YKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV 132 (235)
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc
Confidence 00 2333 3345567999999976543
No 185
>PRK09135 pteridine reductase; Provisional
Probab=99.11 E-value=3.1e-10 Score=94.11 Aligned_cols=73 Identities=12% Similarity=0.141 Sum_probs=59.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hh-------hcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-ME-------SFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~-------~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..++||||||+|+||++++++|+++|++|.++.|+.... .. ..+..++++.+|++|.+++.++++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 346899999999999999999999999999999864321 11 112357899999999999998886
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
.+|.|||+
T Consensus 85 ~~d~vi~~ 92 (249)
T PRK09135 85 RLDALVNN 92 (249)
T ss_pred CCCEEEEC
Confidence 47999998
No 186
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.11 E-value=2.3e-10 Score=102.99 Aligned_cols=92 Identities=20% Similarity=0.182 Sum_probs=72.2
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-CCcEEEEcC---------
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSIICPS--------- 171 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-GvDaVIh~a--------- 171 (209)
|+|||||||||++|+.+|...||+|.+++|++.++...+..+++ .-+.+.++.. +||+||+++
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~-------~~~~~~~~~~~~~DavINLAG~~I~~rrW 73 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVT-------LWEGLADALTLGIDAVINLAGEPIAERRW 73 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCcccc-------ccchhhhcccCCCCEEEECCCCccccccC
Confidence 68999999999999999999999999999999988776665443 2234555665 899999982
Q ss_pred -------------hhH--HHHHH--HhCCCCEEEEecccccccCCC
Q 028418 172 -------------EGF--ISNAG--SLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 -------------~g~--ll~AA--~~aGVkriV~vSS~~Vyg~~~ 200 (209)
..| ++++. .+.+.+-+|--|.++.||++.
T Consensus 74 t~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~ 119 (297)
T COG1090 74 TEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSG 119 (297)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCC
Confidence 011 45543 467888888888899999873
No 187
>PRK05855 short chain dehydrogenase; Validated
Probab=99.11 E-value=6.6e-10 Score=102.92 Aligned_cols=104 Identities=16% Similarity=0.213 Sum_probs=78.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..+++|||||+|+||++++++|.++|++|+++.|+.++... ..+..++++.+|++|++++.++++ .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 35689999999999999999999999999999998765432 123467899999999999988875 47
Q ss_pred cEEEEcC----h--------------------hH------HHHHHHhCCC-CEEEEecccccccCCCC
Q 028418 165 RSIICPS----E--------------------GF------ISNAGSLKGV-QHVILLSQRQRWHSSSN 201 (209)
Q Consensus 165 DaVIh~a----~--------------------g~------ll~AA~~aGV-kriV~vSS~~Vyg~~~~ 201 (209)
|.|||++ . |. ++..+++.+- .+||++||...+...++
T Consensus 394 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~ 461 (582)
T PRK05855 394 DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRS 461 (582)
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC
Confidence 9999982 0 11 1222344443 69999999988765543
No 188
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.11 E-value=7.7e-10 Score=93.54 Aligned_cols=73 Identities=14% Similarity=0.089 Sum_probs=59.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
.+++||||||+|+||++++++|+++|++|.++.|++.+..... ....+++.+|++|++.+.++++ .+|+|||
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4579999999999999999999999999999999876543211 1123688999999999988876 5799999
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 86 ~ 86 (255)
T PRK06057 86 N 86 (255)
T ss_pred C
Confidence 7
No 189
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.10 E-value=1.2e-09 Score=95.53 Aligned_cols=103 Identities=19% Similarity=0.288 Sum_probs=76.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h---h---hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---E---SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~---~---~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++++|||||+|+||++++++|+++|++|.++.|+.... . . ..+..+.++.+|++|.+.+.++++ .
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~ 124 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR 124 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 357899999999999999999999999999999876421 1 1 113457789999999999988775 5
Q ss_pred CcEEEEcC----h---------------------hH--HHHHHHh--CCCCEEEEecccccccCCC
Q 028418 164 VRSIICPS----E---------------------GF--ISNAGSL--KGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 164 vDaVIh~a----~---------------------g~--ll~AA~~--aGVkriV~vSS~~Vyg~~~ 200 (209)
+|+|||++ . ++ +++++.. ..-.+||++||...+....
T Consensus 125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~ 190 (290)
T PRK06701 125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE 190 (290)
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC
Confidence 79999982 0 01 3444432 1236899999988775543
No 190
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.10 E-value=1e-09 Score=92.73 Aligned_cols=98 Identities=13% Similarity=0.185 Sum_probs=74.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hh--cCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES--FGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~--~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
.++++|||||+|+||++++++|+++|++|+++.|+..... .. .+..+.++.+|++|++++.++++ .+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4579999999999999999999999999999998764211 11 13457889999999999988876 579
Q ss_pred EEEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEeccccc
Q 028418 166 SIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQR 195 (209)
Q Consensus 166 aVIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~V 195 (209)
.|||++ . +. ++++ +++.+..+||++||...
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 144 (263)
T PRK08226 85 ILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTG 144 (263)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh
Confidence 999972 0 11 2333 33456789999998654
No 191
>PRK06128 oxidoreductase; Provisional
Probab=99.10 E-value=1.5e-09 Score=94.96 Aligned_cols=105 Identities=15% Similarity=0.228 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch--h------hhcCCceEEEEccCCCHHHHHHhhc------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--M------ESFGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a--~------~~~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
..++++|||||+|+||++++++|+++|++|.+..|+.+.. . ...+..+.++.+|++|++++.++++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 3457999999999999999999999999998877654321 1 1123457889999999998887764
Q ss_pred -CCcEEEEcC-----h--------------------hH--HHHHHHhC--CCCEEEEecccccccCCCC
Q 028418 163 -GVRSIICPS-----E--------------------GF--ISNAGSLK--GVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 163 -GvDaVIh~a-----~--------------------g~--ll~AA~~a--GVkriV~vSS~~Vyg~~~~ 201 (209)
++|.|||++ . ++ +++++... .-.+||++||...+....+
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~ 201 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT 201 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC
Confidence 689999982 0 11 34554321 2259999999988765443
No 192
>PRK12743 oxidoreductase; Provisional
Probab=99.10 E-value=9e-10 Score=93.35 Aligned_cols=72 Identities=25% Similarity=0.200 Sum_probs=58.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc-chhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~-~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
++++|||||+|+||++++++|+++|++|.++.|+.. .... ..+..++++.+|++|++++.++++ .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999999999998876443 2211 124568899999999999887775 57
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|+|||+
T Consensus 82 d~li~~ 87 (256)
T PRK12743 82 DVLVNN 87 (256)
T ss_pred CEEEEC
Confidence 999998
No 193
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.09 E-value=1.1e-09 Score=92.95 Aligned_cols=73 Identities=19% Similarity=0.330 Sum_probs=61.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
..+++|||||+|+||++++++|+++|++|.++.|++++... ..+..+.++++|++|++++.++++ .+|.+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 45799999999999999999999999999999998765432 223457889999999998888764 57999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 85 i~~ 87 (263)
T PRK06200 85 VGN 87 (263)
T ss_pred EEC
Confidence 998
No 194
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.09 E-value=1.5e-09 Score=91.14 Aligned_cols=101 Identities=12% Similarity=0.083 Sum_probs=73.5
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCC--CHHHHHHh------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDAS--NKKFLKTA------ 160 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~--D~~sL~~A------ 160 (209)
-.+.++||||||+|+||.+++++|+++|++|.+++|++++.... ....+.++.+|++ +.+.+.++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 44677999999999999999999999999999999987653221 1234678888886 55544443
Q ss_pred -hcCCcEEEEcC--------------h-----------hH--HHHH----HHhCCCCEEEEecccccc
Q 028418 161 -LRGVRSIICPS--------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 161 -L~GvDaVIh~a--------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vy 196 (209)
+..+|.|||++ . ++ ++++ +++.+.++||++||....
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~ 156 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGR 156 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhc
Confidence 34689999972 0 11 2333 356788999999997654
No 195
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.08 E-value=1.2e-09 Score=92.35 Aligned_cols=101 Identities=11% Similarity=0.140 Sum_probs=76.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...++||||||+|+||++++++|.++|++|+++.|+....... .+.++.++..|++|++++.++++ .
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3468999999999999999999999999999999876543211 13457889999999999887764 5
Q ss_pred CcEEEEcC------------h-----------hH--HHHHH----HhCCCCEEEEeccccccc
Q 028418 164 VRSIICPS------------E-----------GF--ISNAG----SLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 164 vDaVIh~a------------~-----------g~--ll~AA----~~aGVkriV~vSS~~Vyg 197 (209)
+|+|||++ . +. +++++ .+.+..+||++||.....
T Consensus 89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 151 (255)
T PRK06113 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN 151 (255)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC
Confidence 79999982 0 11 33443 244557999999976543
No 196
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.08 E-value=1.5e-09 Score=90.57 Aligned_cols=72 Identities=14% Similarity=0.316 Sum_probs=58.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchh---hhcCCceEEEEccCCCHHHHHHhhcC--------CcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAM---ESFGTYVESMAGDASNKKFLKTALRG--------VRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~---~~~~~~vevv~GDl~D~~sL~~AL~G--------vDa 166 (209)
.++||||||+|+||+++++.|+++|++|..+.|+. .+.. ...+..+.++.+|++|++++.++++. +|+
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~ 84 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT 84 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence 46899999999999999999999999998877643 3222 11234688899999999999888753 899
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
|||+
T Consensus 85 li~~ 88 (253)
T PRK08642 85 VVNN 88 (253)
T ss_pred EEEC
Confidence 9997
No 197
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.07 E-value=1.7e-09 Score=97.39 Aligned_cols=103 Identities=16% Similarity=0.177 Sum_probs=79.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhh-------cC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------RG 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL-------~G 163 (209)
...+++|||||||.||++++++|+++|++|.++.|++++... ..+..+.++..|++|++++.+++ ..
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 345799999999999999999999999999999998865432 12345778899999999999887 36
Q ss_pred CcEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 164 VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+|.+||++ + ++ ++...++.+-.+||++||...+...
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~ 150 (330)
T PRK06139 85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ 150 (330)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC
Confidence 89999982 0 11 2233455666799999997765444
No 198
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.07 E-value=1.4e-09 Score=91.87 Aligned_cols=73 Identities=18% Similarity=0.295 Sum_probs=61.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..+++|||||+|.||++++++|+++|++|.++.|+.++.... .+..+.++.+|++|++++.++++ .+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 457899999999999999999999999999999987654321 13457889999999999888775 78
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.+||+
T Consensus 88 d~lv~~ 93 (253)
T PRK05867 88 DIAVCN 93 (253)
T ss_pred CEEEEC
Confidence 999998
No 199
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.07 E-value=2.5e-09 Score=90.80 Aligned_cols=71 Identities=13% Similarity=0.200 Sum_probs=60.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
...+++|||||+|+||+++++.|+++|++|.++.|++.... ...+.++.+|++|++.+.++++ .+|.|||
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 83 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN 83 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 44679999999999999999999999999999998876543 2357889999999999888765 5799999
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 84 ~ 84 (266)
T PRK06171 84 N 84 (266)
T ss_pred C
Confidence 7
No 200
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.05 E-value=1.7e-09 Score=90.17 Aligned_cols=72 Identities=17% Similarity=0.249 Sum_probs=59.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHHHhhc-------CCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALR-------GVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh~ 170 (209)
.+++|||||+|+||++++++|+++|++|.++.|++++.... ...+++++.+|++|++++.++++ ++|.+||+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 46899999999999999999999999999999987643221 12247889999999998877653 47999998
No 201
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.05 E-value=2.5e-09 Score=90.95 Aligned_cols=74 Identities=14% Similarity=0.192 Sum_probs=60.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h---hhcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~---~~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
...+++|||||++.||+.++++|+++|++|.++.|+.... . ...+.++.++.+|++|++++.++++ .+|
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3467999999999999999999999999999998865321 1 1224567889999999999988875 579
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
++||+
T Consensus 86 ~lv~~ 90 (251)
T PRK12481 86 ILINN 90 (251)
T ss_pred EEEEC
Confidence 99998
No 202
>PRK07985 oxidoreductase; Provisional
Probab=99.05 E-value=4.4e-09 Score=92.20 Aligned_cols=104 Identities=21% Similarity=0.329 Sum_probs=74.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc--chhh------hcCCceEEEEccCCCHHHHHHhhc------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NAME------SFGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~--~a~~------~~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
...+++|||||+|+||++++++|+++|++|.+..|+.. .... ..+..+.++.+|++|++++.++++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 34468999999999999999999999999998876542 1111 123457789999999998877654
Q ss_pred -CCcEEEEcC-h------------------------hH--HHHHHHh---CCCCEEEEecccccccCCCC
Q 028418 163 -GVRSIICPS-E------------------------GF--ISNAGSL---KGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 163 -GvDaVIh~a-~------------------------g~--ll~AA~~---aGVkriV~vSS~~Vyg~~~~ 201 (209)
++|++||++ . ++ +++++.. .+ .+||++||...+....+
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~~~~~~~~~ 195 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSIQAYQPSPH 195 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCchhccCCCC
Confidence 579999872 0 11 3444432 23 68999999887765443
No 203
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.05 E-value=1.9e-09 Score=91.57 Aligned_cols=71 Identities=25% Similarity=0.315 Sum_probs=59.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---c--CCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~--~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
|++|||||+|.||+.++++|+++|++|.++.|++++.... . ...+.++.+|++|++++.++++ .+|+|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5799999999999999999999999999999987653221 1 1257889999999999888774 68999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 81 i~n 83 (259)
T PRK08340 81 VWN 83 (259)
T ss_pred EEC
Confidence 987
No 204
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.04 E-value=1.6e-09 Score=95.94 Aligned_cols=75 Identities=12% Similarity=0.094 Sum_probs=62.2
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------c-CCceEEEEccCCCHHHHHHhhc-----
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~-~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
...+++++|||||++||.+++++|+++|++|+++.|+.++.... . +..++++.+|+.|+++++++++
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 34568999999999999999999999999999999987654321 1 2357899999999999987764
Q ss_pred --CCcEEEEc
Q 028418 163 --GVRSIICP 170 (209)
Q Consensus 163 --GvDaVIh~ 170 (209)
.+|.+||.
T Consensus 91 ~~~iD~li~n 100 (313)
T PRK05854 91 GRPIHLLINN 100 (313)
T ss_pred CCCccEEEEC
Confidence 47999998
No 205
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.04 E-value=2.2e-09 Score=91.23 Aligned_cols=73 Identities=25% Similarity=0.347 Sum_probs=61.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
.++++|||||+|+||++++++|+++|++|.++.|+.+..... .+..+.++.+|++|.+++.++++ .+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 467999999999999999999999999999999987654322 23457889999999998887775 57999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 84 i~~ 86 (262)
T TIGR03325 84 IPN 86 (262)
T ss_pred EEC
Confidence 998
No 206
>PRK08324 short chain dehydrogenase; Validated
Probab=99.04 E-value=1.4e-09 Score=106.42 Aligned_cols=101 Identities=17% Similarity=0.298 Sum_probs=78.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cC--CceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~--~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
.++++|||||+|+||++++++|+++|++|++++|+++..... +. ..+.++.+|++|++++.++++ ++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 457999999999999999999999999999999988654321 22 268899999999999988775 789
Q ss_pred EEEEcC----h--------------------hH--HHH----HHHhCCC-CEEEEecccccccC
Q 028418 166 SIICPS----E--------------------GF--ISN----AGSLKGV-QHVILLSQRQRWHS 198 (209)
Q Consensus 166 aVIh~a----~--------------------g~--ll~----AA~~aGV-kriV~vSS~~Vyg~ 198 (209)
.|||++ . ++ +++ ..++.+. .+||++||..++..
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~ 564 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNP 564 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCC
Confidence 999982 0 11 333 3345565 79999999766543
No 207
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.03 E-value=2.7e-09 Score=90.01 Aligned_cols=71 Identities=17% Similarity=0.257 Sum_probs=59.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
+++|||||+|.||+++++.|+++|++|.++.|+....... .+..+.++.+|++|++.+.++++ .+|.
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA 81 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 6899999999999999999999999999999987644321 13468899999999999888764 5799
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
|||+
T Consensus 82 lI~~ 85 (252)
T PRK07677 82 LINN 85 (252)
T ss_pred EEEC
Confidence 9998
No 208
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.03 E-value=2.1e-09 Score=89.66 Aligned_cols=72 Identities=13% Similarity=0.134 Sum_probs=57.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
++++|||||||+||++++++|+++|+.|+...|+. +.... ..+..+.++.+|++|++++.++++ .+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 45899999999999999999999999988776433 22211 123457789999999999998886 67
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 82 d~li~~ 87 (248)
T PRK06123 82 DALVNN 87 (248)
T ss_pred CEEEEC
Confidence 999998
No 209
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=99.00 E-value=1.8e-09 Score=92.84 Aligned_cols=103 Identities=18% Similarity=0.214 Sum_probs=84.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C---
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a--- 171 (209)
.++..+|.||||-.|+-+++.+++++ -.|.++.|..-.. ......+-.+.-|+..-+.+..+.+|+|+.||+ +
T Consensus 17 q~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d-~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTR 95 (238)
T KOG4039|consen 17 QNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPD-PATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTR 95 (238)
T ss_pred hccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCC-ccccceeeeEEechHHHHHHHhhhcCCceEEEeecccc
Confidence 46689999999999999999999988 4899999875322 223455777888999999999999999999998 1
Q ss_pred -----hhH----------HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 172 -----EGF----------ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 172 -----~g~----------ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+|+ +.++|++.|+++||++||.++..++.-
T Consensus 96 gkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sSrF 140 (238)
T KOG4039|consen 96 GKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSSRF 140 (238)
T ss_pred cccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcccce
Confidence 222 567889999999999999999877654
No 210
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.99 E-value=4.7e-09 Score=91.83 Aligned_cols=74 Identities=16% Similarity=0.274 Sum_probs=60.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcC--CceEEEEccCCCHHHHHHhhc-------CC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFG--TYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~--~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..++++|||||+|.||+++++.|.++|++|.++.|+.++... ..+ ..+..+.+|++|++++.++++ .+
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 456799999999999999999999999999999998865432 122 234556799999999887764 57
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 87 d~vI~n 92 (296)
T PRK05872 87 DVVVAN 92 (296)
T ss_pred CEEEEC
Confidence 999998
No 211
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.99 E-value=4.1e-09 Score=89.16 Aligned_cols=101 Identities=24% Similarity=0.159 Sum_probs=74.0
Q ss_pred CCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCCc-----------ch----h--hhcCCceEEEEccCCCHHHHHH
Q 028418 99 RDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKR-----------NA----M--ESFGTYVESMAGDASNKKFLKT 159 (209)
Q Consensus 99 ~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~~-----------~a----~--~~~~~~vevv~GDl~D~~sL~~ 159 (209)
+++|||||||| .||.+++++|+++|++|.++.|++. .. . ...+..++++..|++|++++..
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 84 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNR 84 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 46899999996 6999999999999999999998721 11 0 1123458899999999999877
Q ss_pred hhc-------CCcEEEEcC-------------h-----------hH--HHHHHH----hCCCCEEEEecccccccCC
Q 028418 160 ALR-------GVRSIICPS-------------E-----------GF--ISNAGS----LKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 160 AL~-------GvDaVIh~a-------------~-----------g~--ll~AA~----~aGVkriV~vSS~~Vyg~~ 199 (209)
+++ .+|+|||++ . ++ +++++. ..+..+||++||...+...
T Consensus 85 ~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~ 161 (256)
T PRK12748 85 VFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM 161 (256)
T ss_pred HHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC
Confidence 764 479999982 0 11 333432 3355799999998776544
No 212
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.99 E-value=4.1e-09 Score=88.18 Aligned_cols=72 Identities=19% Similarity=0.238 Sum_probs=57.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe-CCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR-~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
+++||||||+|+||+.+++.|+++|++|.++++ ++++... ..+.++.++.+|++|++++.++++ .+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 358999999999999999999999999987764 4433221 123468899999999998887664 58
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 82 d~li~~ 87 (248)
T PRK06947 82 DALVNN 87 (248)
T ss_pred CEEEEC
Confidence 999998
No 213
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.98 E-value=9.8e-09 Score=88.48 Aligned_cols=73 Identities=16% Similarity=0.247 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------------hhcCCceEEEEccCCCHHHHHHhhc--
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------------ESFGTYVESMAGDASNKKFLKTALR-- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------------~~~~~~vevv~GDl~D~~sL~~AL~-- 162 (209)
.++++|||||+|+||++++++|+++|++|.++.|+..+.. ...+..+.++.+|++|++.+.++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 3468999999999999999999999999999999764311 1123457889999999999988775
Q ss_pred -----CCcEEEEc
Q 028418 163 -----GVRSIICP 170 (209)
Q Consensus 163 -----GvDaVIh~ 170 (209)
.+|.|||+
T Consensus 85 ~~~~g~id~li~~ 97 (273)
T PRK08278 85 VERFGGIDICVNN 97 (273)
T ss_pred HHHhCCCCEEEEC
Confidence 67999998
No 214
>PRK12742 oxidoreductase; Provisional
Probab=98.98 E-value=3.6e-09 Score=87.72 Aligned_cols=73 Identities=14% Similarity=0.241 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchhhh-cCCceEEEEccCCCHHHHHHhhc---CCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES-FGTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~~~-~~~~vevv~GDl~D~~sL~~AL~---GvDaVIh~ 170 (209)
.+++||||||+|+||++++++|+++|++|.++.|+. +..... ...+++++.+|++|++.+.++++ .+|+|||+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence 457999999999999999999999999998887643 332221 11236788999999998888775 47999998
No 215
>PRK06953 short chain dehydrogenase; Provisional
Probab=98.98 E-value=1.7e-09 Score=89.77 Aligned_cols=72 Identities=14% Similarity=0.132 Sum_probs=61.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh---c--CCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL---R--GVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL---~--GvDaVIh~ 170 (209)
++++|||||+|+||++++++|+++|++|++++|++++.......+++++.+|++|++.+.+++ . .+|.|||+
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ 77 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYV 77 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEEC
Confidence 468999999999999999999999999999999887665444445788999999999998864 3 47999997
No 216
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.98 E-value=7.1e-09 Score=88.24 Aligned_cols=74 Identities=12% Similarity=0.223 Sum_probs=58.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchhh-------hcCCceEEEEccCCCHHHHHHhhc------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME-------SFGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~~-------~~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
...+++|||||+++||++++++|+++|++|.++.|+. +.... ..+..+.++.+|++|++++.++++
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 4467999999999999999999999999998876543 32211 123457899999999998887775
Q ss_pred -CCcEEEEc
Q 028418 163 -GVRSIICP 170 (209)
Q Consensus 163 -GvDaVIh~ 170 (209)
.+|++||+
T Consensus 86 g~id~lv~n 94 (260)
T PRK08416 86 DRVDFFISN 94 (260)
T ss_pred CCccEEEEC
Confidence 47999986
No 217
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.97 E-value=5.5e-09 Score=89.48 Aligned_cols=71 Identities=18% Similarity=0.193 Sum_probs=56.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCC-ceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT-YVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~-~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
++++||||||+||++++++|.++|++|.++.|++++.... .+. .+.++.+|++|++++.++++ ++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 4799999999999999999999999999999987553221 112 24567899999998876654 579
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
+|||+
T Consensus 81 ~lv~~ 85 (272)
T PRK07832 81 VVMNI 85 (272)
T ss_pred EEEEC
Confidence 99998
No 218
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.97 E-value=8.9e-09 Score=87.31 Aligned_cols=73 Identities=16% Similarity=0.188 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch--hh--hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--ME--SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a--~~--~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
.++++|||||+|.||++++++|.++|++|.++.|+.... .. ..+..+.++++|++|++++.++++ .+|.
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~ 88 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI 88 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 457999999999999999999999999999887654221 11 123457889999999999988875 5799
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
+||+
T Consensus 89 li~~ 92 (253)
T PRK08993 89 LVNN 92 (253)
T ss_pred EEEC
Confidence 9998
No 219
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.97 E-value=4.9e-09 Score=87.26 Aligned_cols=69 Identities=20% Similarity=0.215 Sum_probs=55.5
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhh------hcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~------~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
||||||+|+||.+++++|+++|++|.++.|.... ... ..+.++.++.+|++|++++.++++ .+|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999999999999998875432 211 123458899999999999887765 46889
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 81 i~~ 83 (239)
T TIGR01831 81 VLN 83 (239)
T ss_pred EEC
Confidence 886
No 220
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=98.96 E-value=1.3e-08 Score=86.34 Aligned_cols=74 Identities=12% Similarity=0.225 Sum_probs=59.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h----h--hcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M----E--SFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~----~--~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
...+++|||||+|.||++++++|+++|++|.++.|+..+. . . ..+..+.++..|++|++++.++++
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3467999999999999999999999999999888854321 1 1 123457789999999999887764
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
.+|++||+
T Consensus 85 ~id~lv~~ 92 (261)
T PRK08936 85 TLDVMINN 92 (261)
T ss_pred CCCEEEEC
Confidence 57999998
No 221
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.96 E-value=7e-09 Score=92.58 Aligned_cols=105 Identities=15% Similarity=0.176 Sum_probs=83.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhc------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
...++++||||||+.||..++++|.++|++|..+.|+.++...+ .+-.++++..|++|++.+.+..+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 45677999999999999999999999999999999999865422 23447899999999998887664
Q ss_pred -CCcEEEEcC-h---h--------------------------HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 163 -GVRSIICPS-E---G--------------------------FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 -GvDaVIh~a-~---g--------------------------~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+|.+|.++ . + .++.-+.+.+-.+||.++|...+-..+
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p 151 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTP 151 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCc
Confidence 589999872 0 0 034556778888999999987765543
No 222
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.95 E-value=9.8e-09 Score=86.47 Aligned_cols=102 Identities=17% Similarity=0.123 Sum_probs=70.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEE-eCCcchhh------hcCCceEEEEccCCCHHHHHHhhc---------
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME------SFGTYVESMAGDASNKKFLKTALR--------- 162 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLv-R~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~--------- 162 (209)
++++|||||+|+||++++++|.++|++|.+.. |+.+.... ..+..+..+..|++|.+.+..+++
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNR 83 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhh
Confidence 57899999999999999999999999998875 34333221 113346788999999887665432
Q ss_pred ----CCcEEEEcC-------------h-----------hH--HHHHHHhC--CCCEEEEecccccccCCC
Q 028418 163 ----GVRSIICPS-------------E-----------GF--ISNAGSLK--GVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 ----GvDaVIh~a-------------~-----------g~--ll~AA~~a--GVkriV~vSS~~Vyg~~~ 200 (209)
.+|.|||++ + ++ +++++... .-.+||++||...+...+
T Consensus 84 ~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~ 153 (252)
T PRK12747 84 TGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP 153 (252)
T ss_pred cCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCC
Confidence 589999982 0 11 23333221 225999999987765443
No 223
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.95 E-value=5.8e-09 Score=102.55 Aligned_cols=73 Identities=22% Similarity=0.301 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cC-CceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~-~~vevv~GDl~D~~sL~~AL~------- 162 (209)
.++++|||||+|+||++++++|+++|++|+++.|+.+..... .+ ..+..+.+|++|++++.++++
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 357899999999999999999999999999999987654321 11 246789999999999998886
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
++|.|||+
T Consensus 493 ~iDilV~n 500 (676)
T TIGR02632 493 GVDIVVNN 500 (676)
T ss_pred CCcEEEEC
Confidence 78999998
No 224
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.95 E-value=3.2e-09 Score=88.33 Aligned_cols=72 Identities=13% Similarity=0.119 Sum_probs=60.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHhhc-----CCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-----GVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~AL~-----GvDaVIh~ 170 (209)
+++++||||+|+||++++++|+++|++|.++.|++....... ..++.++.+|++|+++++++++ ++|+|||+
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ 78 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVN 78 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence 468999999999999999999999999999999886543211 1357788999999998888776 58999998
No 225
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.95 E-value=9.1e-09 Score=85.51 Aligned_cols=73 Identities=15% Similarity=0.305 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||+++++.|+++|++|.++.|++.+... ..+..+.++..|++|++++.++++ .+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46799999999999999999999999999999998754321 123457889999999998877665 36
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|+|||+
T Consensus 84 d~vi~~ 89 (253)
T PRK08217 84 NGLINN 89 (253)
T ss_pred CEEEEC
Confidence 999997
No 226
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.93 E-value=1.6e-08 Score=84.52 Aligned_cols=74 Identities=11% Similarity=0.087 Sum_probs=56.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCCC--HHHHHHhh------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASN--KKFLKTAL------ 161 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D--~~sL~~AL------ 161 (209)
..++++|||||+|+||++++++|+++|++|.++.|++.+.... ....+.++..|+.| .+.+.+++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 3457999999999999999999999999999999988654321 12246678899976 33444332
Q ss_pred --cCCcEEEEc
Q 028418 162 --RGVRSIICP 170 (209)
Q Consensus 162 --~GvDaVIh~ 170 (209)
..+|.|||+
T Consensus 84 ~~~~id~vi~~ 94 (239)
T PRK08703 84 TQGKLDGIVHC 94 (239)
T ss_pred hCCCCCEEEEe
Confidence 467999998
No 227
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.93 E-value=3.9e-09 Score=94.92 Aligned_cols=84 Identities=14% Similarity=0.230 Sum_probs=71.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCC--cEEEEcC------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPS------ 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~Gv--DaVIh~a------ 171 (209)
|+|||||++|.+|+.|+++|. .+++|.++.|.. .|++|++.+.+.++.. |+|||++
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD 64 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE---------------LDITDPDAVLEVIRETRPDVVINAAAYTAVD 64 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------ccccChHHHHHHHHhhCCCEEEECccccccc
Confidence 459999999999999999988 789999998754 7899999999999865 9999992
Q ss_pred --------------hh--HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 --------------EG--FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 --------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+ .++++|.+.|.+ +||+||-.|+.+..
T Consensus 65 ~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~-lVhiSTDyVFDG~~ 108 (281)
T COG1091 65 KAESEPELAFAVNATGAENLARAAAEVGAR-LVHISTDYVFDGEK 108 (281)
T ss_pred cccCCHHHHHHhHHHHHHHHHHHHHHhCCe-EEEeecceEecCCC
Confidence 01 278899999965 99999998876554
No 228
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=98.92 E-value=1.5e-08 Score=89.81 Aligned_cols=72 Identities=14% Similarity=0.191 Sum_probs=59.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
++++||||||+.||.+++++|+++| ++|.++.|+.++.... .+..++++.+|++|++++.++++ ++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999 9999999987654321 12347788999999999887763 58
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.+||.
T Consensus 83 D~lI~n 88 (314)
T TIGR01289 83 DALVCN 88 (314)
T ss_pred CEEEEC
Confidence 999987
No 229
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.91 E-value=2.7e-09 Score=88.57 Aligned_cols=73 Identities=8% Similarity=0.166 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---c--CCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~--~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
..++||||||+|+||+++++.|+++|++|.+++|++++.... . ..+++++.+|++|++.+.++++ ++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 357999999999999999999999999999999988654322 1 1257899999999999887764 468
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.+||+
T Consensus 84 ~ii~~ 88 (238)
T PRK05786 84 GLVVT 88 (238)
T ss_pred EEEEc
Confidence 89887
No 230
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.91 E-value=1.9e-08 Score=85.24 Aligned_cols=73 Identities=16% Similarity=0.174 Sum_probs=61.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhc---CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR---GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~---GvDaV 167 (209)
..+++|||||+|.||++++++|+++|++|.++.|++++.... .+.++.++.+|++|++++.++++ .+|.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 357999999999999999999999999999999987654321 13457889999999999888765 58999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 86 v~~ 88 (259)
T PRK06125 86 VNN 88 (259)
T ss_pred EEC
Confidence 998
No 231
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.90 E-value=1.4e-08 Score=84.43 Aligned_cols=69 Identities=16% Similarity=0.221 Sum_probs=53.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh---hcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA---LRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A---L~GvDaVIh~ 170 (209)
|+++||||+|+||++++++|++++ +.|.+..|+.... .....+.++++|++|++++.++ +.++|+|||+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~ 74 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINC 74 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 589999999999999999999985 5555555654332 2234678899999999987664 4588999998
No 232
>PRK06484 short chain dehydrogenase; Validated
Probab=98.90 E-value=1.7e-08 Score=94.12 Aligned_cols=75 Identities=19% Similarity=0.292 Sum_probs=62.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
....+++|||||+|.||++++++|+++|++|.++.|++++... ..+..+..+.+|++|++++.++++ .+|
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4467899999999999999999999999999999998765432 234456778999999999888775 479
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.|||+
T Consensus 346 ~li~n 350 (520)
T PRK06484 346 VLVNN 350 (520)
T ss_pred EEEEC
Confidence 99997
No 233
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.88 E-value=1.8e-08 Score=88.82 Aligned_cols=74 Identities=16% Similarity=0.210 Sum_probs=59.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc-chhh------hcCCceEEEEccCCCHHHHHHhhc------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME------SFGTYVESMAGDASNKKFLKTALR------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~-~a~~------~~~~~vevv~GDl~D~~sL~~AL~------G 163 (209)
...+++|||||+|+||++++++|+++|++|++..|+.. .... ..+..+.++.+|++|++.+.++++ .
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 34679999999999999999999999999999887542 2211 124467899999999998888774 5
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.|||+
T Consensus 90 iD~li~n 96 (306)
T PRK07792 90 LDIVVNN 96 (306)
T ss_pred CCEEEEC
Confidence 8999998
No 234
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.88 E-value=1.8e-08 Score=79.32 Aligned_cols=102 Identities=18% Similarity=0.228 Sum_probs=74.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeC--Ccchh------hhcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKD--KRNAM------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~--~~~a~------~~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
+++|||||++.||+.++++|+++| +.|.++.|+ .+... ...+..+++++.|++++++++++++ .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 479999999999999999999995 567777777 22221 1124678999999999998888874 5
Q ss_pred CcEEEEcC-------------h-----------hH--HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 164 VRSIICPS-------------E-----------GF--ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+|.+||++ + +. +.+++...+-.+||++||.......++
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~ 144 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPG 144 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTT
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCC
Confidence 79999982 0 00 344444466899999999876655543
No 235
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.86 E-value=2.8e-08 Score=84.31 Aligned_cols=73 Identities=19% Similarity=0.249 Sum_probs=59.9
Q ss_pred CCCeEEEEcCCC-HHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cC-CceEEEEccCCCHHHHHHhhc------
Q 028418 98 ARDAVLVTDGDS-DIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 98 ~~~~ILVTGATG-fIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~-~~vevv~GDl~D~~sL~~AL~------ 162 (209)
..+++|||||+| .||+.+++.|+++|++|.+..|+.++.... ++ ..+.++++|++|++.+.++++
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 95 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL 95 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 357999999998 699999999999999999999877543211 22 357889999999999888775
Q ss_pred -CCcEEEEc
Q 028418 163 -GVRSIICP 170 (209)
Q Consensus 163 -GvDaVIh~ 170 (209)
.+|+|||+
T Consensus 96 g~id~li~~ 104 (262)
T PRK07831 96 GRLDVLVNN 104 (262)
T ss_pred CCCCEEEEC
Confidence 57999998
No 236
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.86 E-value=5.7e-09 Score=87.78 Aligned_cols=71 Identities=18% Similarity=0.247 Sum_probs=59.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHhhc----CCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR----GVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~AL~----GvDaVIh~ 170 (209)
|++|||||+|.||++++++|.++|++|.++.|+.++..... ..+++++++|++|++++.++++ .+|.+||+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence 47999999999999999999999999999999876653221 1246789999999999988875 58999986
No 237
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.84 E-value=3.3e-08 Score=87.52 Aligned_cols=98 Identities=14% Similarity=0.209 Sum_probs=78.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cC-CceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG-TYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~-~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
...+.++|||||+.||..+++.|.++|++|.+..|+.++.+++ ++ ..+.++..|++|++++.++++ .+|
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 3457899999999999999999999999999999999876533 33 347889999999998666653 689
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccc
Q 028418 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 166 aVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~ 194 (209)
.+|+.+ .|. ++..+.+.+-.+||.+||++
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiA 142 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIA 142 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccc
Confidence 999872 011 55667777777999999976
No 238
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.83 E-value=1.7e-08 Score=87.07 Aligned_cols=73 Identities=14% Similarity=0.174 Sum_probs=60.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.++++|||||+|+||++++++|+++|++|.++.|++.. ...........+..|++|.+.+.+.+..+|.+||+
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnn 86 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILN 86 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEEC
Confidence 35789999999999999999999999999999998732 21111112357889999999999999999999998
No 239
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=98.82 E-value=1.2e-08 Score=93.05 Aligned_cols=98 Identities=14% Similarity=0.085 Sum_probs=79.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhhh--cC--CceEEEEccCCCHHHHHHhhcCCcEEEEc-C-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES--FG--TYVESMAGDASNKKFLKTALRGVRSIICP-S- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~~--~~--~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a- 171 (209)
....-|.|||||+|+.||.+|-..|-+|..--|..+- ...+ .+ .++-+...|+.|+++++++++...+||.+ .
T Consensus 61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGr 140 (391)
T KOG2865|consen 61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGR 140 (391)
T ss_pred ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeecc
Confidence 4467799999999999999999999999999885432 2211 11 35778899999999999999999999998 1
Q ss_pred ---------h-----h--HHHHHHHhCCCCEEEEecccccc
Q 028418 172 ---------E-----G--FISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 172 ---------~-----g--~ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+ + .+...|+++||+|+|++|++++.
T Consensus 141 d~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan 181 (391)
T KOG2865|consen 141 DYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN 181 (391)
T ss_pred ccccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc
Confidence 0 1 17788999999999999998854
No 240
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.81 E-value=4.7e-08 Score=90.20 Aligned_cols=75 Identities=15% Similarity=0.069 Sum_probs=59.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc--hhhh-cCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES-FGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~--a~~~-~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
..+.+++|||||+|.||..+++.|.++|++|.++.|+... .... ...+.+++..|++|++++.++++ ++|
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence 3456799999999999999999999999999999885422 1111 11234688999999998887765 589
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.|||+
T Consensus 287 ~vi~~ 291 (450)
T PRK08261 287 IVVHN 291 (450)
T ss_pred EEEEC
Confidence 99998
No 241
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.81 E-value=7.7e-08 Score=81.87 Aligned_cols=102 Identities=17% Similarity=0.054 Sum_probs=72.9
Q ss_pred CCCCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCC-----------cch---h---hhcCCceEEEEccCCCHHHH
Q 028418 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK-----------RNA---M---ESFGTYVESMAGDASNKKFL 157 (209)
Q Consensus 97 ~~~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~-----------~~a---~---~~~~~~vevv~GDl~D~~sL 157 (209)
...+++||||||| .||++++++|+++|++|.+..|.. ... . ...+..+.++.+|++|++++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 4567999999995 799999999999999998875321 000 0 11234578899999999998
Q ss_pred HHhhc-------CCcEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccC
Q 028418 158 KTALR-------GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 158 ~~AL~-------GvDaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.+++. .+|+|||.+ + +. ++..+++.+-.+||++||......
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 161 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGP 161 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCC
Confidence 88774 369999982 0 11 234445555579999999876543
No 242
>PRK06484 short chain dehydrogenase; Validated
Probab=98.81 E-value=5e-08 Score=91.01 Aligned_cols=73 Identities=18% Similarity=0.257 Sum_probs=61.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
..+++|||||++.||+.++++|.++|++|.++.|+.++... ..+..+.++..|++|++++.++++ .+|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46799999999999999999999999999999998765432 234457789999999999888774 47999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 84 i~n 86 (520)
T PRK06484 84 VNN 86 (520)
T ss_pred EEC
Confidence 987
No 243
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.79 E-value=5.9e-08 Score=80.01 Aligned_cols=99 Identities=22% Similarity=0.289 Sum_probs=71.1
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCc-c-h-h------hhcCCceEEEEccCCCHHHHHHhhcC-------
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-N-A-M------ESFGTYVESMAGDASNKKFLKTALRG------- 163 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~-~-a-~------~~~~~~vevv~GDl~D~~sL~~AL~G------- 163 (209)
++||||++|.||..+++.|.+++. +|.++.|++. . . . ...+..++++..|++|++.+.+++..
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 689999999999999999999974 6888888832 1 1 1 12356689999999999999999864
Q ss_pred CcEEEEcC----h--------------------hH--HHHHHHhCCCCEEEEecccc-cccCC
Q 028418 164 VRSIICPS----E--------------------GF--ISNAGSLKGVQHVILLSQRQ-RWHSS 199 (209)
Q Consensus 164 vDaVIh~a----~--------------------g~--ll~AA~~aGVkriV~vSS~~-Vyg~~ 199 (209)
++.|||++ . |. +.++.....++.||++||++ +.|..
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~ 144 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGP 144 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-T
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCc
Confidence 47899982 0 11 45566678999999999976 45544
No 244
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.79 E-value=2.3e-08 Score=93.63 Aligned_cols=73 Identities=18% Similarity=0.218 Sum_probs=62.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc---CCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~---~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+++|+||||+|+||++++++|.++|++|.++.|++++..... ...++.+..|++|++.+.+.+.++|.+||+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn 252 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIIN 252 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence 4679999999999999999999999999999999876543221 223678899999999999999999999987
No 245
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.78 E-value=3.4e-08 Score=83.61 Aligned_cols=73 Identities=15% Similarity=0.228 Sum_probs=58.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc----hhh------hcCCceEEEEccCCCHHHHHHhhc-----
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AME------SFGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~----a~~------~~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
.++++|||||+|+||+++++.|+++|++|.++.++... ... ..+..++++.+|++|++.+.++++
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 35789999999999999999999999998888765421 111 123468889999999999988775
Q ss_pred --CCcEEEEc
Q 028418 163 --GVRSIICP 170 (209)
Q Consensus 163 --GvDaVIh~ 170 (209)
.+|.+||+
T Consensus 87 ~~~id~li~~ 96 (257)
T PRK12744 87 FGRPDIAINT 96 (257)
T ss_pred hCCCCEEEEC
Confidence 57999998
No 246
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.78 E-value=5.5e-08 Score=87.06 Aligned_cols=98 Identities=16% Similarity=0.176 Sum_probs=70.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------c-CCceEEEEccCCC--HHH---HHHhhcC--
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASN--KKF---LKTALRG-- 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~-~~~vevv~GDl~D--~~s---L~~AL~G-- 163 (209)
++.+|||||||.||++++++|.++|++|.++.|++++.... . ...+..+..|+++ .+. +.+.+.+
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d 132 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD 132 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence 56899999999999999999999999999999998764321 1 1246778899985 333 3444555
Q ss_pred CcEEEEcC-----h---------------------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 164 VRSIICPS-----E---------------------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a-----~---------------------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+|.+||++ . ++ ++..+++.+-.+||++||...+
T Consensus 133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~ 197 (320)
T PLN02780 133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAI 197 (320)
T ss_pred ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhc
Confidence 45888861 0 11 2344556778899999997764
No 247
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.78 E-value=9.3e-08 Score=78.15 Aligned_cols=59 Identities=14% Similarity=0.267 Sum_probs=52.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc---CCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~---GvDaVIh~ 170 (209)
|++|||||+|.||++++++|.++ ++|.++.|++. .+..|++|+++++++++ ++|.|||+
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ 62 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAVVSA 62 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence 47999999999999999999999 99999998653 36789999999988876 68999998
No 248
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.76 E-value=1.6e-07 Score=81.95 Aligned_cols=73 Identities=15% Similarity=0.152 Sum_probs=58.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC---------cchhh------hcCCceEEEEccCCCHHHHHHhhc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---------RNAME------SFGTYVESMAGDASNKKFLKTALR 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~---------~~a~~------~~~~~vevv~GDl~D~~sL~~AL~ 162 (209)
..+++|||||++.||+.++++|+++|++|.++.|+. +.... ..+..+.++..|++|++++.++++
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD 84 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence 457999999999999999999999999999988764 22211 113457789999999998877663
Q ss_pred -------CCcEEEEc
Q 028418 163 -------GVRSIICP 170 (209)
Q Consensus 163 -------GvDaVIh~ 170 (209)
.+|.+||+
T Consensus 85 ~~~~~~g~id~lv~n 99 (286)
T PRK07791 85 AAVETFGGLDVLVNN 99 (286)
T ss_pred HHHHhcCCCCEEEEC
Confidence 57999997
No 249
>PLN00015 protochlorophyllide reductase
Probab=98.75 E-value=6.3e-08 Score=85.32 Aligned_cols=94 Identities=12% Similarity=0.147 Sum_probs=71.0
Q ss_pred EEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CCcEEE
Q 028418 103 LVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (209)
Q Consensus 103 LVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------GvDaVI 168 (209)
|||||++.||.+++++|+++| ++|.+..|+.++.... .+..+.++..|++|++++.++++ .+|.+|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 699999999999999999999 9999999987654321 12357788999999999887764 579999
Q ss_pred EcC--------------h-----------hH------HHHHHHhCC--CCEEEEecccccc
Q 028418 169 CPS--------------E-----------GF------ISNAGSLKG--VQHVILLSQRQRW 196 (209)
Q Consensus 169 h~a--------------~-----------g~------ll~AA~~aG--VkriV~vSS~~Vy 196 (209)
|++ + ++ ++...++.+ -.|||++||...+
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence 872 0 00 234444554 5799999997654
No 250
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.74 E-value=8.5e-08 Score=83.07 Aligned_cols=70 Identities=17% Similarity=0.208 Sum_probs=56.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc------CCcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------GVRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~------GvDa 166 (209)
+++++|||| |+||++++++|. +|++|.++.|++.+.... .+..+.++.+|++|++++.++++ .+|.
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 357899998 699999999995 899999999987543221 13357889999999999988874 5899
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
|||+
T Consensus 80 li~n 83 (275)
T PRK06940 80 LVHT 83 (275)
T ss_pred EEEC
Confidence 9998
No 251
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.70 E-value=4.6e-08 Score=83.58 Aligned_cols=71 Identities=17% Similarity=0.135 Sum_probs=53.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchhh---h----cCCceEEEEccCCCHHHHH----Hhh------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME---S----FGTYVESMAGDASNKKFLK----TAL------ 161 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~~---~----~~~~vevv~GDl~D~~sL~----~AL------ 161 (209)
+++|||||+|+||++++++|+++|++|.++.|+. +.... . .+..+.++.+|++|++++. +++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 5799999999999999999999999999987653 33211 1 1234567899999997553 222
Q ss_pred -cCCcEEEEc
Q 028418 162 -RGVRSIICP 170 (209)
Q Consensus 162 -~GvDaVIh~ 170 (209)
.++|+|||+
T Consensus 82 ~g~iD~lv~n 91 (267)
T TIGR02685 82 FGRCDVLVNN 91 (267)
T ss_pred cCCceEEEEC
Confidence 468999998
No 252
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.69 E-value=7.6e-08 Score=90.07 Aligned_cols=88 Identities=20% Similarity=0.222 Sum_probs=75.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhcCCcEEEEcCh--
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPSE-- 172 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a~-- 172 (209)
|++|||.|| |+||+.++..|.+++ .+|.+..|++++..+. ...+++..+.|+.|.+++.+++++.|+||++..
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF 79 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence 578999999 999999999999998 9999999998776543 234799999999999999999999999999842
Q ss_pred --hHHHHHHHhCCCCEE
Q 028418 173 --GFISNAGSLKGVQHV 187 (209)
Q Consensus 173 --g~ll~AA~~aGVkri 187 (209)
-++++||.++||.-+
T Consensus 80 ~~~~i~ka~i~~gv~yv 96 (389)
T COG1748 80 VDLTILKACIKTGVDYV 96 (389)
T ss_pred hhHHHHHHHHHhCCCEE
Confidence 248899999997643
No 253
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.69 E-value=1.8e-07 Score=84.28 Aligned_cols=104 Identities=16% Similarity=0.155 Sum_probs=81.3
Q ss_pred ccccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------hhcCCc-eEEEEccCCCHHHHHHhh---
Q 028418 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTY-VESMAGDASNKKFLKTAL--- 161 (209)
Q Consensus 93 ~~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------~~~~~~-vevv~GDl~D~~sL~~AL--- 161 (209)
.++.-.++.|+||||+..||.+++.+|..+|.++..++|..++.+ +..... +.++++|++|.+++.+++
T Consensus 6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~ 85 (282)
T KOG1205|consen 6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA 85 (282)
T ss_pred cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence 356677899999999999999999999999999888887665432 223344 899999999999999775
Q ss_pred ----cCCcEEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccc
Q 028418 162 ----RGVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 162 ----~GvDaVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.++|++|+.+ .|+ ++.-+++.+=.|||.+||+.-+
T Consensus 86 ~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 86 IRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK 154 (282)
T ss_pred HHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence 5899999872 011 3444566677899999998644
No 254
>PRK05599 hypothetical protein; Provisional
Probab=98.68 E-value=2.8e-07 Score=78.28 Aligned_cols=70 Identities=17% Similarity=0.194 Sum_probs=57.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cC-CceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~-~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
|++|||||++.||..++++|. +|++|.++.|++++.... .+ ..+.++.+|++|++++.++++ .+|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999998 699999999987654321 12 237789999999999887653 579
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.+|++
T Consensus 80 ~lv~n 84 (246)
T PRK05599 80 LAVVA 84 (246)
T ss_pred EEEEe
Confidence 99987
No 255
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.67 E-value=1.7e-07 Score=79.61 Aligned_cols=62 Identities=16% Similarity=0.164 Sum_probs=51.1
Q ss_pred eEEEEcCCCHHHHHHHHHHHH----CCCcEEEEEeCCcchhhh--------cCCceEEEEccCCCHHHHHHhhc
Q 028418 101 AVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR 162 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~----~G~~VraLvR~~~~a~~~--------~~~~vevv~GDl~D~~sL~~AL~ 162 (209)
.+|||||++.||.+++++|.+ +|++|.++.|+.+..... .+..+.++.+|++|++++.++++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~ 75 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLK 75 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHH
Confidence 589999999999999999987 799999999987654321 12357889999999998888764
No 256
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.66 E-value=3.3e-07 Score=77.83 Aligned_cols=73 Identities=10% Similarity=0.123 Sum_probs=60.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc--------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR--------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~--------G 163 (209)
.++++|||||++.||+.++++|.++|++|.++.|+.++.... .+..+..+..|++|++++.++++ .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 457999999999999999999999999999999988654321 23456778899999999987652 5
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.+||+
T Consensus 84 iD~li~n 90 (227)
T PRK08862 84 PDVLVNN 90 (227)
T ss_pred CCEEEEC
Confidence 8999997
No 257
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.65 E-value=1.2e-07 Score=86.22 Aligned_cols=86 Identities=21% Similarity=0.265 Sum_probs=67.3
Q ss_pred EEEEcCCCHHHHHHHHHHHHCC-C-cEEEEEeCCcchhhh----cCCceEEEEccCCCHHHHHHhhcCCcEEEEcC---h
Q 028418 102 VLVTDGDSDIGQMVILSLIVKR-T-RIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALRGVRSIICPS---E 172 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G-~-~VraLvR~~~~a~~~----~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---~ 172 (209)
|+|.|| |++|+.+++.|.++. + +|.+..|+.+++... ....+++++.|+.|+++|.++++++|.||++. .
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 799999 999999999998876 4 899999999886544 34679999999999999999999999999983 2
Q ss_pred h-HHHHHHHhCCCCEEEE
Q 028418 173 G-FISNAGSLKGVQHVIL 189 (209)
Q Consensus 173 g-~ll~AA~~aGVkriV~ 189 (209)
+ .++++|.++|+. .|=
T Consensus 80 ~~~v~~~~i~~g~~-yvD 96 (386)
T PF03435_consen 80 GEPVARACIEAGVH-YVD 96 (386)
T ss_dssp HHHHHHHHHHHT-E-EEE
T ss_pred hHHHHHHHHHhCCC-eec
Confidence 2 388999999974 444
No 258
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=98.60 E-value=3.1e-07 Score=81.35 Aligned_cols=90 Identities=14% Similarity=0.103 Sum_probs=71.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS------ 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a------ 171 (209)
|+|||+||||. |+.|+++|.++||+|.+.+|+..........+...+..+..|.+.+.+.++ ++|+||+.+
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~ 79 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPFAAQ 79 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHHHHH
Confidence 58999999999 999999999999999999998876543333334456667788888988886 589999873
Q ss_pred -hhHHHHHHHhCCCCEEEEe
Q 028418 172 -EGFISNAGSLKGVQHVILL 190 (209)
Q Consensus 172 -~g~ll~AA~~aGVkriV~v 190 (209)
..+..++|++.|+..+=|.
T Consensus 80 is~~a~~a~~~~~ipylR~e 99 (256)
T TIGR00715 80 ITTNATAVCKELGIPYVRFE 99 (256)
T ss_pred HHHHHHHHHHHhCCcEEEEE
Confidence 1237888999988877664
No 259
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.55 E-value=3.2e-07 Score=83.61 Aligned_cols=102 Identities=15% Similarity=0.099 Sum_probs=81.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hh---------hcCCceEEEEccCCCHHHHHHhhcCC--cE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-ME---------SFGTYVESMAGDASNKKFLKTALRGV--RS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~---------~~~~~vevv~GDl~D~~sL~~AL~Gv--Da 166 (209)
+++.||||-||+-|+.|++.||++||+|..+.|+.+.. .. .....+.++.||++|...|.++++-+ |-
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE 81 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE 81 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence 46899999999999999999999999999999875322 11 11234789999999999999999866 78
Q ss_pred EEEc-C-------------------hhH--HHHHHHhCCC--CEEEEecccccccCCC
Q 028418 167 IICP-S-------------------EGF--ISNAGSLKGV--QHVILLSQRQRWHSSS 200 (209)
Q Consensus 167 VIh~-a-------------------~g~--ll~AA~~aGV--kriV~vSS~~Vyg~~~ 200 (209)
|+++ + .|+ +++|.+..|- -||...||...||...
T Consensus 82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~ 139 (345)
T COG1089 82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQ 139 (345)
T ss_pred heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcc
Confidence 8888 2 133 8999988764 5677789988888653
No 260
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.52 E-value=5.8e-07 Score=81.93 Aligned_cols=102 Identities=13% Similarity=0.054 Sum_probs=75.6
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchh--hhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~--~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a 171 (209)
...+.+|+||||+|.||+.++..|..++ .+++.++++..... .+.....+....+++|+..+.++++|+|+||+++
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVita 84 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICA 84 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECC
Confidence 3457799999999999999999888555 68999988433221 1111112345667788777789999999999982
Q ss_pred -----hh---------------HHHHHHHhCCCCEEEEeccccccc
Q 028418 172 -----EG---------------FISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 172 -----~g---------------~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
.+ .+++++++++++++|+++|-.+..
T Consensus 85 G~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv 130 (321)
T PTZ00325 85 GVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNS 130 (321)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHH
Confidence 11 167889999999999999976643
No 261
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.50 E-value=3.1e-07 Score=76.24 Aligned_cols=74 Identities=16% Similarity=0.165 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc---C--CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~---~--~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++++|+||||.+|+.+++.|..+|++|+++.|+.+++.... . .+.++...|+.|.+.+.++++++|.||++
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a 104 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA 104 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence 34579999999999999999999999999999999887654321 1 13566778899999999999999999987
No 262
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=98.47 E-value=1.1e-06 Score=79.73 Aligned_cols=88 Identities=16% Similarity=0.106 Sum_probs=61.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcE---EEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-ChhH
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRI---KALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF 174 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~V---raLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g~ 174 (209)
+++|+|.||||++|+++++.|.+++|++ ++++|+.+......-.+.++...|+.+. .++++|+||.+ ..+.
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~-----~~~~vDvVf~A~g~g~ 75 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTF-----DFSGVDIALFSAGGSV 75 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHH-----HHcCCCEEEECCChHH
Confidence 4689999999999999999999988865 8898776543322112246666676542 45799999987 3332
Q ss_pred ---HHHHHHhCCCCEEEEecc
Q 028418 175 ---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS 192 (209)
++....++|+ ++|=+|+
T Consensus 76 s~~~~~~~~~~G~-~VIDlS~ 95 (334)
T PRK14874 76 SKKYAPKAAAAGA-VVIDNSS 95 (334)
T ss_pred HHHHHHHHHhCCC-EEEECCc
Confidence 5666667787 5665665
No 263
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.45 E-value=1.3e-06 Score=79.42 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=76.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--------cCCceEEEEccCCCHHHHHHhhc------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--------~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
...++++|||||..||..++++|..+|.+|+...|+.++.... ....+.+++.|+.|..++++..+
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 3448999999999999999999999999999999998654321 12457789999999999988764
Q ss_pred -CCcEEEEcC-----------hh-----------H------HHHHHHhCCCCEEEEecccc
Q 028418 163 -GVRSIICPS-----------EG-----------F------ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 163 -GvDaVIh~a-----------~g-----------~------ll~AA~~aGVkriV~vSS~~ 194 (209)
..|.+|+.+ +| . +++.++...-.|||++||..
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~ 173 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL 173 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence 457777652 22 1 56667766668999999954
No 264
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=98.44 E-value=5e-07 Score=82.20 Aligned_cols=106 Identities=17% Similarity=0.214 Sum_probs=81.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC--CCcEEEEEe-----CCcchh-hhcCCceEEEEccCCCHHHHHHhhc--CCcEEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKALVK-----DKRNAM-ESFGTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~--G~~VraLvR-----~~~~a~-~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh 169 (209)
+.+||||+.||||++.++.+... .+....+.. +...++ ....++..++.+|+.|...+...+. .+|.|+|
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 78999999999999999999874 566666653 211111 1234667899999999999988875 6899999
Q ss_pred cC--------------------hhH--HHHHHHhC-CCCEEEEecccccccCCCCcchh
Q 028418 170 PS--------------------EGF--ISNAGSLK-GVQHVILLSQRQRWHSSSNERKC 205 (209)
Q Consensus 170 ~a--------------------~g~--ll~AA~~a-GVkriV~vSS~~Vyg~~~~l~~~ 205 (209)
.+ .++ ++++++.. ++++|||+|+-.|||++...-..
T Consensus 87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~ 145 (331)
T KOG0747|consen 87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVV 145 (331)
T ss_pred hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccc
Confidence 72 012 78888877 89999999999999998764433
No 265
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.43 E-value=8.5e-07 Score=75.61 Aligned_cols=73 Identities=8% Similarity=0.057 Sum_probs=58.0
Q ss_pred CCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCcch---hhhcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA---MESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~~a---~~~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
..+++|||||+ +.||+.++++|+++|++|.+..|+.+.. .+.....+.+++.|++|++++.++++ .+|
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 85 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID 85 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 35789999999 7999999999999999999998874221 12223357789999999998887653 479
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.+|++
T Consensus 86 ~lv~n 90 (252)
T PRK06079 86 GIVHA 90 (252)
T ss_pred EEEEc
Confidence 99987
No 266
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=98.42 E-value=1.5e-06 Score=79.88 Aligned_cols=90 Identities=12% Similarity=0.176 Sum_probs=72.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC-CceEEEEccCCCHHHHHHh-hcCCcEEEEcC--hh-H
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPS--EG-F 174 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~A-L~GvDaVIh~a--~g-~ 174 (209)
|+|+|.|+ |.+|+++++.|.++|++|+++.|+++....... .+++++.||.+++..+.++ ++++|+||.+. .. .
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~~~n 79 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSDETN 79 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCChHHH
Confidence 57999998 999999999999999999999998887655432 4689999999999999999 89999999872 22 1
Q ss_pred --HHHHHHhC-CCCEEEEe
Q 028418 175 --ISNAGSLK-GVQHVILL 190 (209)
Q Consensus 175 --ll~AA~~a-GVkriV~v 190 (209)
+...+++. +..++|..
T Consensus 80 ~~~~~~~r~~~~~~~ii~~ 98 (453)
T PRK09496 80 MVACQIAKSLFGAPTTIAR 98 (453)
T ss_pred HHHHHHHHHhcCCCeEEEE
Confidence 44556664 77766654
No 267
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.42 E-value=2e-06 Score=73.71 Aligned_cols=73 Identities=10% Similarity=-0.003 Sum_probs=56.1
Q ss_pred CCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCcc------hhhh--cCCceEEEEccCCCHHHHHHhhc-----
Q 028418 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRN------AMES--FGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~~------a~~~--~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
..+++|||||+ +.||+.++++|.++|++|.+..|+.++ ..+. ....+.+++.|++|++++.++++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 45789999986 799999999999999999887665432 1111 11235688999999999987764
Q ss_pred --CCcEEEEc
Q 028418 163 --GVRSIICP 170 (209)
Q Consensus 163 --GvDaVIh~ 170 (209)
.+|.+||+
T Consensus 85 ~g~iD~lv~n 94 (258)
T PRK07370 85 WGKLDILVHC 94 (258)
T ss_pred cCCCCEEEEc
Confidence 57999987
No 268
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=98.38 E-value=3e-06 Score=73.21 Aligned_cols=90 Identities=17% Similarity=0.247 Sum_probs=71.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC--CceEEEEccCCCHHHHHHh-hcCCcEEEEc-C--hh
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTA-LRGVRSIICP-S--EG 173 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~--~~vevv~GDl~D~~sL~~A-L~GvDaVIh~-a--~g 173 (209)
|+++|.| .|.+|++|++.|.++||+|.++.++++....... ....++.||-+|++.|.+| +..+|+++.+ . .-
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~~ 79 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDEV 79 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCHH
Confidence 3566665 5899999999999999999999999988766333 4578999999999999999 8999999987 2 22
Q ss_pred H--HHHHH-HhCCCCEEEEe
Q 028418 174 F--ISNAG-SLKGVQHVILL 190 (209)
Q Consensus 174 ~--ll~AA-~~aGVkriV~v 190 (209)
+ +...+ ++.|++++|--
T Consensus 80 N~i~~~la~~~~gv~~viar 99 (225)
T COG0569 80 NSVLALLALKEFGVPRVIAR 99 (225)
T ss_pred HHHHHHHHHHhcCCCcEEEE
Confidence 2 33334 45799988753
No 269
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.38 E-value=1.5e-06 Score=74.43 Aligned_cols=74 Identities=16% Similarity=0.133 Sum_probs=58.7
Q ss_pred CCCCeEEEEcC--CCHHHHHHHHHHHHCCCcEEEEEeCC--cchh---hhcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDK--RNAM---ESFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGA--TGfIG~~VV~~Ll~~G~~VraLvR~~--~~a~---~~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
...++++|||| ++.||..++++|.++|++|.+..|+. +... ...+..+.++..|++|++++.++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 34578999999 89999999999999999999998765 2111 1223357789999999998887753
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
.+|.+|++
T Consensus 85 ~iD~li~n 92 (256)
T PRK07889 85 GLDGVVHS 92 (256)
T ss_pred CCcEEEEc
Confidence 57999987
No 270
>PRK08303 short chain dehydrogenase; Provisional
Probab=98.37 E-value=2.1e-06 Score=76.25 Aligned_cols=74 Identities=11% Similarity=0.087 Sum_probs=58.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc----------chh---h---hcCCceEEEEccCCCHHHHHHh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----------NAM---E---SFGTYVESMAGDASNKKFLKTA 160 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~----------~a~---~---~~~~~vevv~GDl~D~~sL~~A 160 (209)
...+++|||||++.||+.++++|+++|++|.++.|+.. +.. . ..+..+.++++|++|+++++++
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 34679999999999999999999999999999999742 111 1 1123467899999999998877
Q ss_pred hc-------CCcEEEEc
Q 028418 161 LR-------GVRSIICP 170 (209)
Q Consensus 161 L~-------GvDaVIh~ 170 (209)
++ .+|.+|++
T Consensus 86 ~~~~~~~~g~iDilVnn 102 (305)
T PRK08303 86 VERIDREQGRLDILVND 102 (305)
T ss_pred HHHHHHHcCCccEEEEC
Confidence 63 57888875
No 271
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.34 E-value=8.7e-07 Score=80.56 Aligned_cols=69 Identities=16% Similarity=0.087 Sum_probs=50.7
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCC-------CcEEEEEeCCcchhhhcCCceE------EEEccCCCHHHHHHhhcCCcEE
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKR-------TRIKALVKDKRNAMESFGTYVE------SMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G-------~~VraLvR~~~~a~~~~~~~ve------vv~GDl~D~~sL~~AL~GvDaV 167 (209)
+|+||||+|+||++++..|+..+ .+|++++|++... ...+...+ ...+|+.....+.++++|+|.|
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~-~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV 82 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK-ALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA 82 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc-cccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence 79999999999999999998844 5899999865321 01111112 2234555567788999999999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 83 I~t 85 (325)
T cd01336 83 ILV 85 (325)
T ss_pred EEe
Confidence 999
No 272
>PRK06720 hypothetical protein; Provisional
Probab=98.33 E-value=3.3e-06 Score=69.84 Aligned_cols=74 Identities=15% Similarity=0.161 Sum_probs=59.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhh-------cC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------RG 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL-------~G 163 (209)
..++.++||||++.||+.+++.|.++|++|.+..|+.+.... ..+..+.++..|++|++.+.+++ ..
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 356799999999999999999999999999999987654321 12344678899999999887754 36
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.+||+
T Consensus 94 iDilVnn 100 (169)
T PRK06720 94 IDMLFQN 100 (169)
T ss_pred CCEEEEC
Confidence 8999998
No 273
>PLN00106 malate dehydrogenase
Probab=98.32 E-value=3.3e-06 Score=77.11 Aligned_cols=100 Identities=14% Similarity=0.109 Sum_probs=72.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchh--hhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~--~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
.+..+|+||||+|+||+.++..|..++. +++.+++++.... .+..........++.+.+++.++++|+|.|||++
T Consensus 16 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG 95 (323)
T PLN00106 16 APGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAG 95 (323)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCC
Confidence 3456999999999999999999987664 7999988772221 2111112234445555556889999999999982
Q ss_pred ----hh---------------HHHHHHHhCCCCEEEEecccccc
Q 028418 172 ----EG---------------FISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 172 ----~g---------------~ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.+ .+++++++.+.+.+|+++|--+.
T Consensus 96 ~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD 139 (323)
T PLN00106 96 VPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVN 139 (323)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 11 16778889999999999996554
No 274
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=98.32 E-value=5.6e-06 Score=62.61 Aligned_cols=68 Identities=19% Similarity=0.240 Sum_probs=57.4
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~ 170 (209)
|+|.|. |.+|+.+++.|.+.+++|+++.++++........+++++.||.+|++.|.++ ++.+++|+.+
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~ 69 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVIL 69 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEE
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEc
Confidence 577777 6899999999999778999999999877665556689999999999999986 5789999987
No 275
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=98.32 E-value=1.6e-06 Score=80.70 Aligned_cols=99 Identities=19% Similarity=0.220 Sum_probs=67.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc-ChhH
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP-SEGF 174 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~-a~g~ 174 (209)
.+++|+|.||||++|+.+++.|.++ .++|++++++.+..+........+..+|+.+...++.+ ++++|+||.+ ..+.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~ 116 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGT 116 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHH
Confidence 4568999999999999999999888 78999999865443221111223344555544444443 7899999997 3222
Q ss_pred ---HHHHHHhCCCCEEEEecccccccC
Q 028418 175 ---ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
++.++ +.| .++|-+|+..-+.+
T Consensus 117 s~~i~~~~-~~g-~~VIDlSs~fRl~~ 141 (381)
T PLN02968 117 TQEIIKAL-PKD-LKIVDLSADFRLRD 141 (381)
T ss_pred HHHHHHHH-hCC-CEEEEcCchhccCC
Confidence 56665 456 67999998665443
No 276
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.31 E-value=3.1e-06 Score=72.67 Aligned_cols=73 Identities=11% Similarity=0.094 Sum_probs=57.5
Q ss_pred CCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCc---chhh---hc-CCceEEEEccCCCHHHHHHhhc------
Q 028418 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAME---SF-GTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~---~a~~---~~-~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
..++++||||+ +-||+.++++|.++|++|.+..|+.+ .... .. +..+.+++.|++|++++.++++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 45799999997 89999999999999999998877532 1111 11 2457789999999999887764
Q ss_pred -CCcEEEEc
Q 028418 163 -GVRSIICP 170 (209)
Q Consensus 163 -GvDaVIh~ 170 (209)
.+|.+||+
T Consensus 86 g~ld~lv~n 94 (257)
T PRK08594 86 GVIHGVAHC 94 (257)
T ss_pred CCccEEEEC
Confidence 47999886
No 277
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=98.24 E-value=6.7e-07 Score=79.57 Aligned_cols=97 Identities=20% Similarity=0.203 Sum_probs=81.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc--Ch---
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICP--SE--- 172 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~--a~--- 172 (209)
....||.|+.||.|++|++..+..++.|..|.|+..+ ....+..++.|+++|.....-+..++.|+..|+-+ ..
T Consensus 52 ~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~ 131 (283)
T KOG4288|consen 52 VEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNI 131 (283)
T ss_pred HHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccch
Confidence 4578999999999999999999999999999998754 34556778999999999888889999999999877 11
Q ss_pred -------hH----HHHHHHhCCCCEEEEeccccc
Q 028418 173 -------GF----ISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 173 -------g~----ll~AA~~aGVkriV~vSS~~V 195 (209)
++ -+.+|.++||++|||+|....
T Consensus 132 ~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~ 165 (283)
T KOG4288|consen 132 ILMDRINGTANINAVKAAAKAGVPRFVYISAHDF 165 (283)
T ss_pred HHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhc
Confidence 11 466788999999999997544
No 278
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.24 E-value=4e-06 Score=72.60 Aligned_cols=67 Identities=4% Similarity=0.131 Sum_probs=49.1
Q ss_pred EEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC--HHHHHHhhcCCcEEEEc
Q 028418 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICP 170 (209)
Q Consensus 103 LVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D--~~sL~~AL~GvDaVIh~ 170 (209)
+=-.+|||+|++++++|+++|++|+++.|+..... ....+++++..+..+ .+.+.+++.++|+|||+
T Consensus 20 itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~ 88 (229)
T PRK06732 20 ITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHS 88 (229)
T ss_pred ecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeC
Confidence 33367999999999999999999999997653221 112356776654433 35677778899999998
No 279
>PRK09620 hypothetical protein; Provisional
Probab=98.23 E-value=3.8e-06 Score=73.15 Aligned_cols=73 Identities=19% Similarity=0.247 Sum_probs=53.7
Q ss_pred CCCeEEEEcCC----------------CHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHH
Q 028418 98 ARDAVLVTDGD----------------SDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKT 159 (209)
Q Consensus 98 ~~~~ILVTGAT----------------GfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~ 159 (209)
.+++||||+|- ||+|++|+++|+.+|++|+++.+......... ...+..+.++....+.+.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~ 81 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS 81 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence 46789999775 99999999999999999999986432111111 1224456775555578888
Q ss_pred hhc--CCcEEEEc
Q 028418 160 ALR--GVRSIICP 170 (209)
Q Consensus 160 AL~--GvDaVIh~ 170 (209)
+++ ++|+|||+
T Consensus 82 ~~~~~~~D~VIH~ 94 (229)
T PRK09620 82 IITHEKVDAVIMA 94 (229)
T ss_pred HhcccCCCEEEEC
Confidence 884 78999999
No 280
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.21 E-value=5.4e-06 Score=71.95 Aligned_cols=72 Identities=7% Similarity=0.034 Sum_probs=56.3
Q ss_pred CCCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCCcch---hhh---cCCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNA---MES---FGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~~~a---~~~---~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
.++.+|||||++ .||+.++++|.++|++|.+..|+.... ... .+ ...++++|++|++++.++++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 357899999997 999999999999999999988875321 111 12 23468999999999887763
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
.+|.+|++
T Consensus 85 ~iD~lVnn 92 (271)
T PRK06505 85 KLDFVVHA 92 (271)
T ss_pred CCCEEEEC
Confidence 57999987
No 281
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=98.21 E-value=5.9e-06 Score=79.12 Aligned_cols=100 Identities=22% Similarity=0.277 Sum_probs=73.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCC---CcEEEEEeCCcc--hhh----hc---------------CCceEEEEccCC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRN--AME----SF---------------GTYVESMAGDAS 152 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G---~~VraLvR~~~~--a~~----~~---------------~~~vevv~GDl~ 152 (209)
-..++|||||||||+|.-+++.|+..- -++..+.|.... +.+ .+ -..+..+.||+.
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 356799999999999999999999753 367777786532 111 10 034678899998
Q ss_pred CHH------HHHHhhcCCcEEEEcC-----------------hhH--HHHHHHhC-CCCEEEEecccccc
Q 028418 153 NKK------FLKTALRGVRSIICPS-----------------EGF--ISNAGSLK-GVQHVILLSQRQRW 196 (209)
Q Consensus 153 D~~------sL~~AL~GvDaVIh~a-----------------~g~--ll~AA~~a-GVkriV~vSS~~Vy 196 (209)
+++ .++...+.+++|||++ .|+ +++.|++. ..+-+||+|+.-+.
T Consensus 90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n 159 (467)
T KOG1221|consen 90 EPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN 159 (467)
T ss_pred CcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee
Confidence 753 5556678999999992 122 67788764 78999999997665
No 282
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.20 E-value=6.7e-06 Score=70.34 Aligned_cols=73 Identities=8% Similarity=-0.058 Sum_probs=56.6
Q ss_pred CCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCcch---hhhc--CCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA---MESF--GTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~~a---~~~~--~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++|||||+ +.||+.++++|+++|++|.+..|+.+.. .... ...+.++.+|++|++++.++++ .
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 45799999998 5999999999999999999998875421 1111 1234578999999998887653 5
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|++|++
T Consensus 89 ld~lv~n 95 (258)
T PRK07533 89 LDFLLHS 95 (258)
T ss_pred CCEEEEc
Confidence 7999987
No 283
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.20 E-value=1.1e-05 Score=89.74 Aligned_cols=101 Identities=17% Similarity=0.258 Sum_probs=76.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcc-----------------------------------------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRN----------------------------------------- 135 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~----------------------------------------- 135 (209)
..+++|||||++.||..++++|.++ |.+|.++.|++..
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 4679999999999999999999988 6999999998210
Q ss_pred ----------h--hhhcCCceEEEEccCCCHHHHHHhhc------CCcEEEEcC------------------------hh
Q 028418 136 ----------A--MESFGTYVESMAGDASNKKFLKTALR------GVRSIICPS------------------------EG 173 (209)
Q Consensus 136 ----------a--~~~~~~~vevv~GDl~D~~sL~~AL~------GvDaVIh~a------------------------~g 173 (209)
. ....+..++++.+|++|++++.++++ ++|.|||.+ .|
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 0 01124457889999999999988875 579999972 01
Q ss_pred H--HHHHHHhCCCCEEEEeccccc-ccC
Q 028418 174 F--ISNAGSLKGVQHVILLSQRQR-WHS 198 (209)
Q Consensus 174 ~--ll~AA~~aGVkriV~vSS~~V-yg~ 198 (209)
. +++++.....++||++||... +|.
T Consensus 2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G~ 2183 (2582)
T TIGR02813 2156 LLSLLAALNAENIKLLALFSSAAGFYGN 2183 (2582)
T ss_pred HHHHHHHHHHhCCCeEEEEechhhcCCC
Confidence 1 566666667789999999754 443
No 284
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.19 E-value=6.9e-06 Score=71.61 Aligned_cols=72 Identities=10% Similarity=0.072 Sum_probs=56.5
Q ss_pred CCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCc---chh---hhcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAM---ESFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~---~a~---~~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..+.+|||||+ +.||+.++++|.++|++|.+..|+.+ ... ...+.. .++++|++|++++.++++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35799999997 79999999999999999999888742 111 112323 578999999999887763
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
.+|.+||+
T Consensus 83 ~iDilVnn 90 (274)
T PRK08415 83 KIDFIVHS 90 (274)
T ss_pred CCCEEEEC
Confidence 57999987
No 285
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.16 E-value=8.9e-06 Score=70.50 Aligned_cols=73 Identities=10% Similarity=0.060 Sum_probs=56.9
Q ss_pred CCCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCCc---chhhhc--CCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~~---~a~~~~--~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++++|||||++ .||+.++++|+++|++|....|+.. ...... ...+.++.+|++|++++.++++ .
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 457899999986 8999999999999999988888732 111111 1235678999999999998774 4
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.+||+
T Consensus 85 iD~linn 91 (262)
T PRK07984 85 FDGFVHS 91 (262)
T ss_pred CCEEEEC
Confidence 7999987
No 286
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.14 E-value=1.1e-05 Score=69.37 Aligned_cols=73 Identities=7% Similarity=0.046 Sum_probs=55.7
Q ss_pred CCCeEEEEcC--CCHHHHHHHHHHHHCCCcEEEEEeCCc---chhhhc--CCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGA--TGfIG~~VV~~Ll~~G~~VraLvR~~~---~a~~~~--~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++||||| ++.||+.++++|+++|++|.+..|+.. ...+.. ......+++|++|++++.++++ .
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4578999997 679999999999999999988766532 111111 1234578999999999887763 5
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.+||+
T Consensus 85 iD~lVnn 91 (261)
T PRK08690 85 LDGLVHS 91 (261)
T ss_pred CcEEEEC
Confidence 7999988
No 287
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=98.13 E-value=1e-05 Score=74.29 Aligned_cols=89 Identities=13% Similarity=0.107 Sum_probs=58.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEE--EEeCCcchhhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc-Chh-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA--LVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP-SEG- 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~Vra--LvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g- 173 (209)
+.+|+|+||||++|+.+++.|.+++|++.. .+++.+.+.+... .+ ...++.+.+.. .++++|.||.+ ..+
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~---~~l~~~~~~~~--~~~~vD~vFla~p~~~ 78 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG---KNLRVREVDSF--DFSQVQLAFFAAGAAV 78 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC---cceEEeeCChH--HhcCCCEEEEcCCHHH
Confidence 468999999999999999999988887666 3345544322111 11 23444444432 26899999997 223
Q ss_pred --HHHHHHHhCCCCEEEEeccc
Q 028418 174 --FISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 174 --~ll~AA~~aGVkriV~vSS~ 193 (209)
.+++.+.++|++ +|=+|+.
T Consensus 79 s~~~v~~~~~~G~~-VIDlS~~ 99 (336)
T PRK05671 79 SRSFAEKARAAGCS-VIDLSGA 99 (336)
T ss_pred HHHHHHHHHHCCCe-EEECchh
Confidence 277778888864 6656653
No 288
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.12 E-value=3.4e-06 Score=77.79 Aligned_cols=69 Identities=20% Similarity=0.199 Sum_probs=52.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHC-C-CcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVK-R-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~-G-~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...+++||||||+|+||++++++|+.+ | .++..+.|+.+++.... .++..+++. .+.+++.++|.|||+
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La---~el~~~~i~---~l~~~l~~aDiVv~~ 222 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQ---AELGGGKIL---SLEEALPEADIVVWV 222 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHH---HHhccccHH---hHHHHHccCCEEEEC
Confidence 456789999999999999999999865 5 58888888876654332 123334544 477899999999998
No 289
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=98.11 E-value=2.1e-05 Score=72.42 Aligned_cols=95 Identities=20% Similarity=0.253 Sum_probs=73.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHHh-hcCCcEEEEcC--
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTA-LRGVRSIICPS-- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~a-- 171 (209)
.++++|+|.|+ |.+|+++++.|.++|++|.++.++++...... ..++.++.||.+|++.|.++ ++.+|+||.+.
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~ 307 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTND 307 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCC
Confidence 34678999999 99999999999999999999999987654332 23578999999999999654 57899998872
Q ss_pred -hhH--HHHHHHhCCCCEEEEecc
Q 028418 172 -EGF--ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 -~g~--ll~AA~~aGVkriV~vSS 192 (209)
..+ +...|++.++.++|....
T Consensus 308 ~~~n~~~~~~~~~~~~~~ii~~~~ 331 (453)
T PRK09496 308 DEANILSSLLAKRLGAKKVIALVN 331 (453)
T ss_pred cHHHHHHHHHHHHhCCCeEEEEEC
Confidence 222 334567778887776544
No 290
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=98.08 E-value=1.8e-05 Score=72.36 Aligned_cols=86 Identities=16% Similarity=0.158 Sum_probs=58.9
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEE---eCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-ChhH--
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALV---KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF-- 174 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLv---R~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g~-- 174 (209)
+|+|.||||++|+.+++.|.+++|++..++ ++.+......-.+.+.+..|+. ..+++++|+||.+ ..+.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~D~v~~a~g~~~s~ 75 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-----IESFEGIDIALFSAGGSVSK 75 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-----hHHhcCCCEEEECCCHHHHH
Confidence 589999999999999999999889876555 5544322221123567777774 2356899999987 3332
Q ss_pred -HHHHHHhCCCCEEEEecc
Q 028418 175 -ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 175 -ll~AA~~aGVkriV~vSS 192 (209)
++..+.++|+ ++|=+|+
T Consensus 76 ~~a~~~~~~G~-~VID~ss 93 (339)
T TIGR01296 76 EFAPKAAKCGA-IVIDNTS 93 (339)
T ss_pred HHHHHHHHCCC-EEEECCH
Confidence 5555667787 4665555
No 291
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.07 E-value=1.3e-05 Score=68.78 Aligned_cols=72 Identities=8% Similarity=-0.078 Sum_probs=54.6
Q ss_pred CCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCCcc---hhhhcC--CceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRN---AMESFG--TYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~~~---a~~~~~--~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.+++|||||++ .||+.++++|.++|++|.+..|+... ...... ....++++|++|++++.++++ .+
T Consensus 8 ~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 87 (260)
T PRK06603 8 GKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSF 87 (260)
T ss_pred CcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence 46899999997 79999999999999999888887421 111111 122357899999999888774 47
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.+|+.
T Consensus 88 DilVnn 93 (260)
T PRK06603 88 DFLLHG 93 (260)
T ss_pred cEEEEc
Confidence 998886
No 292
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.05 E-value=1.3e-05 Score=68.98 Aligned_cols=72 Identities=14% Similarity=0.166 Sum_probs=54.8
Q ss_pred CCCeEEEEcC--CCHHHHHHHHHHHHCCCcEEEEEeC---Ccchhhh---cCCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKD---KRNAMES---FGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGA--TGfIG~~VV~~Ll~~G~~VraLvR~---~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..+++||||| ++.||+.++++|+++|++|.+..|. .+..... .+ ...++..|++|++++.++++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG-SDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC-CcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 4579999996 6799999999999999999887643 2222211 22 23468899999999988874
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
.+|.+|++
T Consensus 84 ~iD~lvnn 91 (260)
T PRK06997 84 GLDGLVHS 91 (260)
T ss_pred CCcEEEEc
Confidence 57999986
No 293
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.05 E-value=1.6e-05 Score=69.06 Aligned_cols=71 Identities=6% Similarity=0.020 Sum_probs=55.5
Q ss_pred CCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCc---chhhh---cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 99 RDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES---FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 99 ~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~---~a~~~---~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.+++|||||+ +.||..++++|.++|++|.+..|+.. ..... .+ ...++++|++|++++.++++ .
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 4689999997 89999999999999999988777632 11111 12 25578999999999988764 4
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.+||+
T Consensus 89 iD~lv~n 95 (272)
T PRK08159 89 LDFVVHA 95 (272)
T ss_pred CcEEEEC
Confidence 7999987
No 294
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.03 E-value=3.2e-05 Score=64.75 Aligned_cols=74 Identities=15% Similarity=0.237 Sum_probs=57.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-----hhhhcC----CceEEEEccCCC-HHHHHHhhc----
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESFG----TYVESMAGDASN-KKFLKTALR---- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-----a~~~~~----~~vevv~GDl~D-~~sL~~AL~---- 162 (209)
..++.||||||++.||..++++|+++|+.|.++.|+... ...... ..+.+...|+++ ++++..+++
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999987653 112222 356778899998 887776653
Q ss_pred ---CCcEEEEc
Q 028418 163 ---GVRSIICP 170 (209)
Q Consensus 163 ---GvDaVIh~ 170 (209)
++|.+|+.
T Consensus 83 ~~g~id~lvnn 93 (251)
T COG1028 83 EFGRIDILVNN 93 (251)
T ss_pred HcCCCCEEEEC
Confidence 48877776
No 295
>PRK05086 malate dehydrogenase; Provisional
Probab=97.97 E-value=4.7e-05 Score=68.88 Aligned_cols=94 Identities=14% Similarity=0.088 Sum_probs=64.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHH---CCCcEEEEEeCCcch---hhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 100 DAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNA---MESFG-TYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~---~G~~VraLvR~~~~a---~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
|+|+|+||||.||++++..|.. .++++++++|++... ..... .....+.+ .+.+.+.++++++|.||.++
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG 78 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG 78 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence 5899999999999999988744 356888888875321 11111 11123333 23345678899999999882
Q ss_pred ----hh---------------HHHHHHHhCCCCEEEEeccccc
Q 028418 172 ----EG---------------FISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 172 ----~g---------------~ll~AA~~aGVkriV~vSS~~V 195 (209)
.+ .+++++++.+.+++|.+.|--+
T Consensus 79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~ 121 (312)
T PRK05086 79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPV 121 (312)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCch
Confidence 11 1677888899999999988433
No 296
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=97.97 E-value=3.6e-05 Score=79.84 Aligned_cols=99 Identities=15% Similarity=0.092 Sum_probs=73.0
Q ss_pred CCccccCCCCeEEEEcCCCHHHHHHHHHHHHC-CCc-------------EEEEEeCCcchhhhcC--CceEEEEccCCCH
Q 028418 91 EDEFPEEARDAVLVTDGDSDIGQMVILSLIVK-RTR-------------IKALVKDKRNAMESFG--TYVESMAGDASNK 154 (209)
Q Consensus 91 ~~~~~~~~~~~ILVTGATGfIG~~VV~~Ll~~-G~~-------------VraLvR~~~~a~~~~~--~~vevv~GDl~D~ 154 (209)
+.......+++|+|.|| |+||+.+++.|.+. +++ |.+.+++++.+..... ++++.++.|+.|.
T Consensus 561 ~~~~~~~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~ 639 (1042)
T PLN02819 561 EKAEVTKKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDS 639 (1042)
T ss_pred ccccccccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCH
Confidence 33344566889999997 99999999999764 333 6666666666543322 3578899999999
Q ss_pred HHHHHhhcCCcEEEEcC----hhHHHHHHHhCCCCEEEEec
Q 028418 155 KFLKTALRGVRSIICPS----EGFISNAGSLKGVQHVILLS 191 (209)
Q Consensus 155 ~sL~~AL~GvDaVIh~a----~g~ll~AA~~aGVkriV~vS 191 (209)
+.+.++++++|+||.+. ...++.+|.++|+ |+|-.|
T Consensus 640 e~L~~~v~~~DaVIsalP~~~H~~VAkaAieaGk-Hvv~ek 679 (1042)
T PLN02819 640 ESLLKYVSQVDVVISLLPASCHAVVAKACIELKK-HLVTAS 679 (1042)
T ss_pred HHHHHhhcCCCEEEECCCchhhHHHHHHHHHcCC-CEEECc
Confidence 99999999999999982 2237778888884 665554
No 297
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.94 E-value=0.00014 Score=56.56 Aligned_cols=86 Identities=21% Similarity=0.277 Sum_probs=54.0
Q ss_pred eEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCc-ch---hhhcC---CceEEEEccCCCHHHHHHhhcCCcEEEEc-C
Q 028418 101 AVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR-NA---MESFG---TYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~-~a---~~~~~---~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a 171 (209)
+|.|.||||++|+.+++.|.+. ..++..++.+.. .. ...++ ...+...-+ .+++ .+.++|.||++ .
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~Dvvf~a~~ 75 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPE----ELSDVDVVFLALP 75 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGH----HHTTESEEEE-SC
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cchh----HhhcCCEEEecCc
Confidence 6899999999999999988884 456666665444 22 12221 112232222 3333 45999999998 3
Q ss_pred hhH---HHHHHHhCCCCEEEEecc
Q 028418 172 EGF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 ~g~---ll~AA~~aGVkriV~vSS 192 (209)
.+. +...+.+.|+ ++|=+|+
T Consensus 76 ~~~~~~~~~~~~~~g~-~ViD~s~ 98 (121)
T PF01118_consen 76 HGASKELAPKLLKAGI-KVIDLSG 98 (121)
T ss_dssp HHHHHHHHHHHHHTTS-EEEESSS
T ss_pred hhHHHHHHHHHhhCCc-EEEeCCH
Confidence 332 6667778887 5665555
No 298
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=97.93 E-value=7e-05 Score=72.01 Aligned_cols=71 Identities=14% Similarity=0.222 Sum_probs=61.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~ 170 (209)
++.|+|.| .|.+|++++++|.++|++|.++++|+++.+.....+..++.||.+|++.+++| ++.+|+|+.+
T Consensus 417 ~~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~ 488 (558)
T PRK10669 417 CNHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLT 488 (558)
T ss_pred CCCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence 56888887 58899999999999999999999999877655556789999999999999876 4788988876
No 299
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=97.93 E-value=4.1e-05 Score=69.94 Aligned_cols=93 Identities=14% Similarity=0.034 Sum_probs=59.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhh--cCCceEE-EEccCCCHHHHHHhhcCCcEEEEc-Chh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMES--FGTYVES-MAGDASNKKFLKTALRGVRSIICP-SEG 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~--~~~~vev-v~GDl~D~~sL~~AL~GvDaVIh~-a~g 173 (209)
+++|+|.||||++|+.+++.|.+. +++++++.++.+..+.. ..+.+.. ...++.+.+.. ++.++|+||++ ..+
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~~ 79 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPHG 79 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCcH
Confidence 468999999999999999999876 68898888744332111 0111111 12234444432 56889999988 222
Q ss_pred ---HHHHHHHhCCCCEEEEecccc
Q 028418 174 ---FISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 174 ---~ll~AA~~aGVkriV~vSS~~ 194 (209)
.++.++.++| +++|=+|+.-
T Consensus 80 ~~~~~v~~a~~aG-~~VID~S~~f 102 (343)
T PRK00436 80 VSMDLAPQLLEAG-VKVIDLSADF 102 (343)
T ss_pred HHHHHHHHHHhCC-CEEEECCccc
Confidence 2666666777 6788777643
No 300
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=97.91 E-value=0.00013 Score=67.02 Aligned_cols=75 Identities=21% Similarity=0.223 Sum_probs=62.1
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc----CCceEEEEccCCCHHHHHHhhc---------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF----GTYVESMAGDASNKKFLKTALR--------- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~----~~~vevv~GDl~D~~sL~~AL~--------- 162 (209)
..+.+.|||||+....|+.++++|.++|+.|.|-.-.++.++.+. .+....++.|+++++++++|.+
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 456778999999999999999999999999999997776654332 3567788999999999999985
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
|--+||+.
T Consensus 106 gLwglVNN 113 (322)
T KOG1610|consen 106 GLWGLVNN 113 (322)
T ss_pred cceeEEec
Confidence 45567776
No 301
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.88 E-value=3.4e-05 Score=69.01 Aligned_cols=87 Identities=14% Similarity=0.164 Sum_probs=66.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCC--cEEEEcC---
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPS--- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~Gv--DaVIh~a--- 171 (209)
+++|||||+||.+|++|++.+.+++. +=.++. .--..|+++.+..++.++-. ..|||++
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~--------------~skd~DLt~~a~t~~lF~~ekPthVIhlAAmV 66 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI--------------GSKDADLTNLADTRALFESEKPTHVIHLAAMV 66 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEe--------------ccccccccchHHHHHHHhccCCceeeehHhhh
Confidence 47999999999999999999998876 222221 11245789999888888654 6788882
Q ss_pred --------------------hhHHHHHHHhCCCCEEEEecccccccCC
Q 028418 172 --------------------EGFISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 --------------------~g~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
..+++..|-+.||+++|++-|..+|..-
T Consensus 67 GGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdk 114 (315)
T KOG1431|consen 67 GGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDK 114 (315)
T ss_pred cchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCC
Confidence 0127888999999999999888777553
No 302
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=97.85 E-value=5.8e-05 Score=69.10 Aligned_cols=92 Identities=13% Similarity=0.074 Sum_probs=56.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC-CCcEEEE-EeCCcchh---hhcCCceEEE-EccCCCHHHHHHhhcCCcEEEEc-Ch
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKAL-VKDKRNAM---ESFGTYVESM-AGDASNKKFLKTALRGVRSIICP-SE 172 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~-G~~VraL-vR~~~~a~---~~~~~~vevv-~GDl~D~~sL~~AL~GvDaVIh~-a~ 172 (209)
++|+|.||||++|+.+++.|.+. +++++++ +++.+..+ ..++ .+... ..++.+. ...+.+.++|+||++ ..
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~-~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~ 78 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHP-HLRGLVDLNLEPI-DEEEIAEDADVVFLALPH 78 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCc-cccccCCceeecC-CHHHhhcCCCEEEECCCc
Confidence 47999999999999999999875 6788866 43332211 1122 11111 1112211 123444689999998 22
Q ss_pred hH---HHHHHHhCCCCEEEEecccc
Q 028418 173 GF---ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 173 g~---ll~AA~~aGVkriV~vSS~~ 194 (209)
+. ++.++.++| .++|=+|+.-
T Consensus 79 ~~s~~~~~~~~~~G-~~VIDlS~~f 102 (346)
T TIGR01850 79 GVSAELAPELLAAG-VKVIDLSADF 102 (346)
T ss_pred hHHHHHHHHHHhCC-CEEEeCChhh
Confidence 22 666677778 7788888753
No 303
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=97.84 E-value=0.00017 Score=64.87 Aligned_cols=36 Identities=11% Similarity=0.025 Sum_probs=32.0
Q ss_pred CCCCeEEEEcC--CCHHHHHHHHHHHHCCCcEEEEEeCC
Q 028418 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDK 133 (209)
Q Consensus 97 ~~~~~ILVTGA--TGfIG~~VV~~Ll~~G~~VraLvR~~ 133 (209)
...+++||||| +..||..++++|.++|.+|.+ +|+.
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~ 44 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWV 44 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCc
Confidence 56789999999 799999999999999999988 6643
No 304
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.79 E-value=0.00012 Score=66.87 Aligned_cols=94 Identities=15% Similarity=0.123 Sum_probs=58.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEE------------EEccCCCHHHHHHhhcCCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVES------------MAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vev------------v~GDl~D~~sL~~AL~GvD 165 (209)
+.+|+|+||||++|+.+++.|++... ++++++++.+.+......-..+ +...-.+++. ++++|
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~D 78 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEA----VDDVD 78 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHH----hcCCC
Confidence 46899999999999999999987644 8888866664432221100000 1111124443 46899
Q ss_pred EEEEc-ChhH---HHHHHHhCCCCEEEEecccccc
Q 028418 166 SIICP-SEGF---ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 166 aVIh~-a~g~---ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.||.+ ..+. +++++.++|++.|.+.++...+
T Consensus 79 vVf~a~p~~~s~~~~~~~~~~G~~vIDls~~fR~~ 113 (349)
T PRK08664 79 IVFSALPSDVAGEVEEEFAKAGKPVFSNASAHRMD 113 (349)
T ss_pred EEEEeCChhHHHHHHHHHHHCCCEEEECCchhcCC
Confidence 99887 2222 6677788898866665544333
No 305
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=97.78 E-value=0.00016 Score=70.69 Aligned_cols=71 Identities=20% Similarity=0.241 Sum_probs=62.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~ 170 (209)
++.|+|.| -|.+|+++++.|.++|++++++++|++..+.....+..++.||.+|++.|++| ++.+|+|+.+
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence 56788887 79999999999999999999999999877655445688999999999999987 6889999987
No 306
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=97.76 E-value=5.6e-05 Score=70.84 Aligned_cols=87 Identities=16% Similarity=0.247 Sum_probs=69.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHH----CCCcEEEEEeCCcchhhh-----------cCCceEEEEccCCCHHHHHHhhcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNAMES-----------FGTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~----~G~~VraLvR~~~~a~~~-----------~~~~vevv~GDl~D~~sL~~AL~G 163 (209)
+--+.|.|||||+|..+++.++. .+...-+..||+++..+. +...+ ++.+|..|+++|.+-.+-
T Consensus 5 ~yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~ 83 (423)
T KOG2733|consen 5 RYDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQ 83 (423)
T ss_pred eeeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhh
Confidence 34588999999999999999998 788888888999876421 12234 899999999999999999
Q ss_pred CcEEEEcC-----hh-HHHHHHHhCCCCE
Q 028418 164 VRSIICPS-----EG-FISNAGSLKGVQH 186 (209)
Q Consensus 164 vDaVIh~a-----~g-~ll~AA~~aGVkr 186 (209)
+..|+.|. .| .++.||.++|..|
T Consensus 84 ~~vivN~vGPyR~hGE~VVkacienG~~~ 112 (423)
T KOG2733|consen 84 ARVIVNCVGPYRFHGEPVVKACIENGTHH 112 (423)
T ss_pred hEEEEeccccceecCcHHHHHHHHcCCce
Confidence 99999882 22 3777777777544
No 307
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.75 E-value=0.0004 Score=63.37 Aligned_cols=105 Identities=12% Similarity=0.191 Sum_probs=78.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcC--CceEEEEccCCCHHHHHHhh-------cCC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFG--TYVESMAGDASNKKFLKTAL-------RGV 164 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~--~~vevv~GDl~D~~sL~~AL-------~Gv 164 (209)
..+..||||||.+.+|+.++.++.++|..+.+.+.+.+...+ ... ..+..+..|++|++.+.+.. ..+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V 115 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV 115 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence 456799999999999999999999999988888888865431 111 25788999999998776554 467
Q ss_pred cEEEEcC------------h------------h------HHHHHHHhCCCCEEEEecccccccCCCC
Q 028418 165 RSIICPS------------E------------G------FISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 165 DaVIh~a------------~------------g------~ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+.+|+.+ + + .++..+.+..=.|||-++|+.-+-...+
T Consensus 116 ~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~g 182 (300)
T KOG1201|consen 116 DILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAG 182 (300)
T ss_pred eEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCcc
Confidence 8888762 0 1 1567778888899999998655444433
No 308
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=97.74 E-value=0.00031 Score=64.65 Aligned_cols=88 Identities=13% Similarity=0.117 Sum_probs=56.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEE-----eCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-----KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLv-----R~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a 171 (209)
...+|+|.||||++|+.+++.|.+++|++.-+. |+..+.... .+.+++..++. .+++.++|+||.+ .
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~--~~~~~~v~~~~-----~~~~~~~D~vf~a~p 78 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF--EGRDYTVEELT-----EDSFDGVDIALFSAG 78 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee--cCceeEEEeCC-----HHHHcCCCEEEECCC
Confidence 346899999999999999999998888655443 333222111 12444544443 2356899999987 3
Q ss_pred hhH---HHHHHHhCCCCEEEEeccc
Q 028418 172 EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 ~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
.+. ++..+.++|+ ++|=+|+.
T Consensus 79 ~~~s~~~~~~~~~~g~-~VIDlS~~ 102 (344)
T PLN02383 79 GSISKKFGPIAVDKGA-VVVDNSSA 102 (344)
T ss_pred cHHHHHHHHHHHhCCC-EEEECCch
Confidence 332 5555566674 46666653
No 309
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.69 E-value=0.0002 Score=63.08 Aligned_cols=73 Identities=12% Similarity=0.211 Sum_probs=59.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHHhh-------cCCcEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTAL-------RGVRSII 168 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~AL-------~GvDaVI 168 (209)
...+|||||++..||..+++++++.|-+|..-.|+.+...+.. .+.+.-++.|+.|.++.++.+ ...+++|
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 3569999999999999999999999999999999997764322 245777899999999766554 2568888
Q ss_pred Ec
Q 028418 169 CP 170 (209)
Q Consensus 169 h~ 170 (209)
.+
T Consensus 84 NN 85 (245)
T COG3967 84 NN 85 (245)
T ss_pred ec
Confidence 77
No 310
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=97.68 E-value=0.00071 Score=60.09 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=75.6
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------c---CCceEEEEccCCCHHHHHHhh-----
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F---GTYVESMAGDASNKKFLKTAL----- 161 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~---~~~vevv~GDl~D~~sL~~AL----- 161 (209)
....+.+|||||+.-||+.++++|.+.|.+|....|+.+..... . +..+..+..|+++.+...+++
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999988753211 1 234788999999888766654
Q ss_pred ---cCCcEEEEcC-------------------------hhH---HH----HHHHhCCCCEEEEecccccccC
Q 028418 162 ---RGVRSIICPS-------------------------EGF---IS----NAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 162 ---~GvDaVIh~a-------------------------~g~---ll----~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
-..|.+|+.+ .|. +. ...++.+-..||++||...+..
T Consensus 85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~ 156 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGP 156 (270)
T ss_pred HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccC
Confidence 2479988761 011 11 2234557789999999865544
No 311
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.66 E-value=0.00028 Score=65.02 Aligned_cols=75 Identities=16% Similarity=0.305 Sum_probs=60.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cC--Cc---eEEEEccCCCHHHHHHhhcC----
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TY---VESMAGDASNKKFLKTALRG---- 163 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~--~~---vevv~GDl~D~~sL~~AL~G---- 163 (209)
..++..|+|||++..+|..++..+..+|++|+++.|+.++.... +. .+ +.+..+|+.|-+++..++++
T Consensus 30 ~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~ 109 (331)
T KOG1210|consen 30 PKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDL 109 (331)
T ss_pred cCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhc
Confidence 34557899999999999999999999999999999998765322 11 22 44778999999888887754
Q ss_pred ---CcEEEEc
Q 028418 164 ---VRSIICP 170 (209)
Q Consensus 164 ---vDaVIh~ 170 (209)
.|.+|||
T Consensus 110 ~~~~d~l~~c 119 (331)
T KOG1210|consen 110 EGPIDNLFCC 119 (331)
T ss_pred cCCcceEEEe
Confidence 3889988
No 312
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.65 E-value=0.00016 Score=64.39 Aligned_cols=72 Identities=8% Similarity=0.074 Sum_probs=57.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCC---cchhhh---c---CCceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---RNAMES---F---GTYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~---~~a~~~---~---~~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
..++++|||| |.+|+.++..|...|++ |.++.|+. +++... + ...+.+...|+.|.+.+.++++.+|.|
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil 203 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL 203 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence 4568999999 89999999999999987 99999986 443321 1 123456678999998899899999999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
|++
T Consensus 204 INa 206 (289)
T PRK12548 204 VNA 206 (289)
T ss_pred EEe
Confidence 987
No 313
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.65 E-value=9.7e-05 Score=65.87 Aligned_cols=98 Identities=12% Similarity=0.066 Sum_probs=62.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-----------cCCce------EEEEccCCCHHHHHHh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----------FGTYV------ESMAGDASNKKFLKTA 160 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-----------~~~~v------evv~GDl~D~~sL~~A 160 (209)
|.++|.|+| +|.+|..++..|+.+|++|++..|+++..... ...+. +.....+.-..++.++
T Consensus 1 ~~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a 79 (308)
T PRK06129 1 PMGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADA 79 (308)
T ss_pred CCcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHh
Confidence 456899999 99999999999999999999999988644321 01110 0000011111346678
Q ss_pred hcCCcEEEEc-Ch--h---HHHHHHHhCCCCEEEEecccccc
Q 028418 161 LRGVRSIICP-SE--G---FISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 161 L~GvDaVIh~-a~--g---~ll~AA~~aGVkriV~vSS~~Vy 196 (209)
++++|.||.+ .+ . .++.......-.++|+.|+.+.+
T Consensus 80 ~~~ad~Vi~avpe~~~~k~~~~~~l~~~~~~~~ii~ssts~~ 121 (308)
T PRK06129 80 VADADYVQESAPENLELKRALFAELDALAPPHAILASSTSAL 121 (308)
T ss_pred hCCCCEEEECCcCCHHHHHHHHHHHHHhCCCcceEEEeCCCC
Confidence 9999999988 21 1 14444444444566667776654
No 314
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=97.57 E-value=0.00031 Score=63.79 Aligned_cols=103 Identities=13% Similarity=0.153 Sum_probs=76.4
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-----hhhc-------CCceEEEEccCCCHHHHHHhhcC
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MESF-------GTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-----~~~~-------~~~vevv~GDl~D~~sL~~AL~G 163 (209)
..+++..||||=||.=|+.|++.|+.+||+|..+.|..+.- ..+. +.......||++|...|.+.+.-
T Consensus 25 ~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ 104 (376)
T KOG1372|consen 25 FRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIST 104 (376)
T ss_pred cccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhc
Confidence 45677899999999999999999999999999999876532 1111 23467889999999999998865
Q ss_pred C--cEEEEc-C-------------------hhH--HHHHHHhCCC---CEEEEecccccccC
Q 028418 164 V--RSIICP-S-------------------EGF--ISNAGSLKGV---QHVILLSQRQRWHS 198 (209)
Q Consensus 164 v--DaVIh~-a-------------------~g~--ll~AA~~aGV---kriV~vSS~~Vyg~ 198 (209)
+ +-|+|+ + .|+ +++|.+..++ -||--.|+...||-
T Consensus 105 ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGk 166 (376)
T KOG1372|consen 105 IKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGK 166 (376)
T ss_pred cCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhccc
Confidence 4 445555 1 234 7888766655 34666788888873
No 315
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=97.54 E-value=0.00015 Score=67.48 Aligned_cols=86 Identities=12% Similarity=0.046 Sum_probs=66.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC----
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (209)
...++|-|||||.|..++++|..+|..-....||..+.. ..++ -++...++.+|+.+++.+.++++|++|.
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG--~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt 83 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG--PEAAVFPLGVPAALEAMASRTQVVLNCVGPYT 83 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC--ccccccCCCCHHHHHHHHhcceEEEecccccc
Confidence 346999999999999999999999999977779887764 2334 3455566777999999999999999992
Q ss_pred -hhH-HHHHHHhCCCCE
Q 028418 172 -EGF-ISNAGSLKGVQH 186 (209)
Q Consensus 172 -~g~-ll~AA~~aGVkr 186 (209)
.|. ++++|..+|+..
T Consensus 84 ~~g~plv~aC~~~GTdY 100 (382)
T COG3268 84 RYGEPLVAACAAAGTDY 100 (382)
T ss_pred ccccHHHHHHHHhCCCe
Confidence 232 677777666543
No 316
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.54 E-value=0.0002 Score=60.61 Aligned_cols=78 Identities=8% Similarity=0.049 Sum_probs=58.3
Q ss_pred HHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc----CCcEEEEcC----------------hhH
Q 028418 115 VILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPS----------------EGF 174 (209)
Q Consensus 115 VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~----GvDaVIh~a----------------~g~ 174 (209)
++++|+++|++|.+++|+.++.. ..+++++|++|.+++.++++ ++|+|||++ .++
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~~ 75 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLGL 75 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHHH
Confidence 46889999999999999876532 14678999999999998886 589999982 011
Q ss_pred --HHHHHHhC--CCCEEEEeccccccc
Q 028418 175 --ISNAGSLK--GVQHVILLSQRQRWH 197 (209)
Q Consensus 175 --ll~AA~~a--GVkriV~vSS~~Vyg 197 (209)
+++++... .-.+||++||...++
T Consensus 76 ~~l~~~~~~~~~~~g~Iv~isS~~~~~ 102 (241)
T PRK12428 76 RHLTEALLPRMAPGGAIVNVASLAGAE 102 (241)
T ss_pred HHHHHHHHHhccCCcEEEEeCcHHhhc
Confidence 34444321 226999999998875
No 317
>PRK04148 hypothetical protein; Provisional
Probab=97.53 E-value=0.00049 Score=56.05 Aligned_cols=88 Identities=10% Similarity=0.022 Sum_probs=72.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc--C---hh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP--S---EG 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~--a---~g 173 (209)
.++|++.|.. .|.+++..|.+.|++|.+++.++..........++++.+|+.+|+ .+.-+++|.|+.. . .-
T Consensus 17 ~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~--~~~y~~a~liysirpp~el~~ 92 (134)
T PRK04148 17 NKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPN--LEIYKNAKLIYSIRPPRDLQP 92 (134)
T ss_pred CCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCC--HHHHhcCCEEEEeCCCHHHHH
Confidence 4689999965 787899999999999999999998665444456899999999998 5667899999987 2 33
Q ss_pred HHHHHHHhCCCCEEEEe
Q 028418 174 FISNAGSLKGVQHVILL 190 (209)
Q Consensus 174 ~ll~AA~~aGVkriV~v 190 (209)
.+++.|++.++.-+|.-
T Consensus 93 ~~~~la~~~~~~~~i~~ 109 (134)
T PRK04148 93 FILELAKKINVPLIIKP 109 (134)
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 48999999999877763
No 318
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=97.46 E-value=0.00077 Score=59.15 Aligned_cols=82 Identities=16% Similarity=0.058 Sum_probs=55.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHH-CCCcEEEEE-eCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--hh-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALV-KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS--EG- 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~-~G~~VraLv-R~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a--~g- 173 (209)
+++|+|+|++|.+|+.+++.+.+ .+.++++++ ++++..... -..++...+.+.++++++|+||.+. ..
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-------~~~~i~~~~dl~~ll~~~DvVid~t~p~~~ 73 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-------GALGVAITDDLEAVLADADVLIDFTTPEAT 73 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-------CCCCccccCCHHHhccCCCEEEECCCHHHH
Confidence 36899999999999999988876 478888866 444433221 1123333445667777899999762 22
Q ss_pred -HHHHHHHhCCCCEE
Q 028418 174 -FISNAGSLKGVQHV 187 (209)
Q Consensus 174 -~ll~AA~~aGVkri 187 (209)
.++.+|.++|+.-+
T Consensus 74 ~~~~~~al~~G~~vv 88 (257)
T PRK00048 74 LENLEFALEHGKPLV 88 (257)
T ss_pred HHHHHHHHHcCCCEE
Confidence 26777888885443
No 319
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=97.45 E-value=0.00049 Score=64.62 Aligned_cols=69 Identities=13% Similarity=0.059 Sum_probs=55.6
Q ss_pred CCCCeEEEEcC----------------CCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh
Q 028418 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 160 (209)
Q Consensus 97 ~~~~~ILVTGA----------------TGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A 160 (209)
..+++|||||| +|.+|.+++++|..+|++|.++.++... . .+.+ +...|+++.+.+.++
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~--~~~~--~~~~dv~~~~~~~~~ 260 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-P--TPAG--VKRIDVESAQEMLDA 260 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-c--CCCC--cEEEccCCHHHHHHH
Confidence 45789999999 9999999999999999999999987632 1 1222 345699998888877
Q ss_pred h----cCCcEEEEc
Q 028418 161 L----RGVRSIICP 170 (209)
Q Consensus 161 L----~GvDaVIh~ 170 (209)
+ ..+|.+||+
T Consensus 261 v~~~~~~~DilI~~ 274 (399)
T PRK05579 261 VLAALPQADIFIMA 274 (399)
T ss_pred HHHhcCCCCEEEEc
Confidence 7 468999998
No 320
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.43 E-value=0.00064 Score=64.20 Aligned_cols=71 Identities=18% Similarity=0.259 Sum_probs=54.9
Q ss_pred CCeEEEEcCCCHHHHH--HHHHHHHCCCcEEEEEeCCcc---------------hh---hhcCCceEEEEccCCCHHHHH
Q 028418 99 RDAVLVTDGDSDIGQM--VILSLIVKRTRIKALVKDKRN---------------AM---ESFGTYVESMAGDASNKKFLK 158 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~--VV~~Ll~~G~~VraLvR~~~~---------------a~---~~~~~~vevv~GDl~D~~sL~ 158 (209)
.+++|||||++.+|.. ++++| .+|.+|.++.+...+ .. ...+..+..+.+|+++++.+.
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~ 119 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ 119 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 4699999999999999 89999 999999998853311 11 112334667899999999887
Q ss_pred Hhhc-------CCcEEEEc
Q 028418 159 TALR-------GVRSIICP 170 (209)
Q Consensus 159 ~AL~-------GvDaVIh~ 170 (209)
++++ .+|.|||.
T Consensus 120 ~lie~I~e~~G~IDiLVnS 138 (398)
T PRK13656 120 KVIELIKQDLGQVDLVVYS 138 (398)
T ss_pred HHHHHHHHhcCCCCEEEEC
Confidence 7653 58999998
No 321
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=97.40 E-value=0.00087 Score=65.93 Aligned_cols=71 Identities=18% Similarity=0.206 Sum_probs=60.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~ 170 (209)
++.|+|.| -|.+|+.+++.|.++|++++++.+|+++.+.....+..++.||.+|++.|++| ++.++.||.+
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence 56788887 58899999999999999999999999877655445688999999999999865 5788999987
No 322
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.40 E-value=0.00042 Score=63.21 Aligned_cols=62 Identities=16% Similarity=0.177 Sum_probs=46.5
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-------cEEEEEeCC--cchhhhcCCceEEEEccCCCH-----------HHHHHh
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDK--RNAMESFGTYVESMAGDASNK-----------KFLKTA 160 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~-------~VraLvR~~--~~a~~~~~~~vevv~GDl~D~-----------~sL~~A 160 (209)
+|.||||+|+||+.++..|..++. +++.+++++ +. .+....|+.|. ....++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~--------~~g~~~Dl~d~~~~~~~~~~i~~~~~~~ 73 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKA--------LEGVVMELQDCAFPLLKGVVITTDPEEA 73 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCc--------cceeeeehhhhcccccCCcEEecChHHH
Confidence 799999999999999998887552 588888765 32 22333444443 355789
Q ss_pred hcCCcEEEEc
Q 028418 161 LRGVRSIICP 170 (209)
Q Consensus 161 L~GvDaVIh~ 170 (209)
++|+|.|||+
T Consensus 74 ~~~aDiVVit 83 (323)
T cd00704 74 FKDVDVAILV 83 (323)
T ss_pred hCCCCEEEEe
Confidence 9999999998
No 323
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=97.38 E-value=0.00051 Score=62.64 Aligned_cols=87 Identities=15% Similarity=0.100 Sum_probs=53.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcCCc-------------eEEEEccCCCHHHHHHhhcCCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTY-------------VESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~~~-------------vevv~GDl~D~~sL~~AL~GvD 165 (209)
++|+|+||||++|++|++.|.++. .++.+++++...+....... .+...-++ +++ .+.++|
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~D 75 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEP-EPV----ASKDVD 75 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeC-CHH----HhccCC
Confidence 479999999999999999888866 68888865443221111100 01111111 222 457899
Q ss_pred EEEEcC-hh---HHHHHHHhCCCCEEEEecc
Q 028418 166 SIICPS-EG---FISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 166 aVIh~a-~g---~ll~AA~~aGVkriV~vSS 192 (209)
.||.+. .+ .+.+++.++|++ +|-+|+
T Consensus 76 vVf~a~p~~~s~~~~~~~~~~G~~-VIDlsg 105 (341)
T TIGR00978 76 IVFSALPSEVAEEVEPKLAEAGKP-VFSNAS 105 (341)
T ss_pred EEEEeCCHHHHHHHHHHHHHCCCE-EEECCh
Confidence 999872 22 256777788876 444554
No 324
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.38 E-value=0.00043 Score=60.08 Aligned_cols=70 Identities=26% Similarity=0.293 Sum_probs=59.4
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhcCC
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGV 164 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~Gv 164 (209)
.......||||||--.||+.++.+|...|.+|.++.|+++....+ .+.-++.+++|+.+.+.+.+++.-+
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v 75 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPV 75 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhccc
Confidence 345678999999999999999999999999999999999876543 2333899999999999999998643
No 325
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=97.38 E-value=0.00066 Score=53.36 Aligned_cols=85 Identities=15% Similarity=0.067 Sum_probs=53.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHH-CCCcEEEEEeCCc-chh-----hhc---CCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKR-NAM-----ESF---GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~-~G~~VraLvR~~~-~a~-----~~~---~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
++|+|.|++|.+|+.+++.+.+ .++++.+.+.... ... ... ..++.+ .+.+.++++.+|+||.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v-------~~~l~~~~~~~DVvID 73 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPV-------TDDLEELLEEADVVID 73 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBE-------BS-HHHHTTH-SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCccccc-------chhHHHhcccCCEEEE
Confidence 4799999999999999999998 7899877774333 111 011 111111 1456777877999987
Q ss_pred cC--hh--HHHHHHHhCCCCEEEEec
Q 028418 170 PS--EG--FISNAGSLKGVQHVILLS 191 (209)
Q Consensus 170 ~a--~g--~ll~AA~~aGVkriV~vS 191 (209)
.. .. ..++.|.++|+.-++-++
T Consensus 74 fT~p~~~~~~~~~~~~~g~~~ViGTT 99 (124)
T PF01113_consen 74 FTNPDAVYDNLEYALKHGVPLVIGTT 99 (124)
T ss_dssp ES-HHHHHHHHHHHHHHT-EEEEE-S
T ss_pred cCChHHhHHHHHHHHhCCCCEEEECC
Confidence 73 22 267777888877666554
No 326
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.34 E-value=0.00051 Score=63.00 Aligned_cols=97 Identities=14% Similarity=0.118 Sum_probs=71.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-------hcCCceEEEEccCCCHHH----HHHhhcCCcEE-
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKF----LKTALRGVRSI- 167 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-------~~~~~vevv~GDl~D~~s----L~~AL~GvDaV- 167 (209)
.=..|||||..||+..+++|..+|.+|..+.|+.++... ...-.+.++..|+++++. +.+.|.+.|.=
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI 129 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI 129 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence 457899999999999999999999999999999987632 122346789999998775 77777777763
Q ss_pred -EEc-C-------------hh------------H------HHHHHHhCCCCEEEEecccccc
Q 028418 168 -ICP-S-------------EG------------F------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 168 -Ih~-a-------------~g------------~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
|.+ . .+ + ++.-+.+.+-.-||.+||.+-.
T Consensus 130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~ 191 (312)
T KOG1014|consen 130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL 191 (312)
T ss_pred EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc
Confidence 333 1 10 0 3444566677789999886543
No 327
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.34 E-value=0.00043 Score=61.61 Aligned_cols=66 Identities=14% Similarity=0.031 Sum_probs=54.9
Q ss_pred CCCeEEEEcC-CCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHhhcC
Q 028418 98 ARDAVLVTDG-DSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 98 ~~~~ILVTGA-TGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~AL~G 163 (209)
..+.|||||+ .|.||..|++.+.++|+.|.|..|+.++...+. ..++.....|+++++.+.+....
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~e 73 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGE 73 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHH
Confidence 3457888875 699999999999999999999999998765543 45688899999999998887643
No 328
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.30 E-value=0.00037 Score=56.70 Aligned_cols=64 Identities=9% Similarity=-0.034 Sum_probs=45.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|++|.+.|- |.+|+.+++.|+++||+|.+..|++++.......+++.+ ++..++++.+|+||.+
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~~~~dvvi~~ 64 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVA-------DSPAEAAEQADVVILC 64 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEE-------SSHHHHHHHBSEEEE-
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhh-------hhhhhHhhcccceEee
Confidence 578999987 999999999999999999999999887765443333332 2345566666777765
No 329
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.28 E-value=0.00052 Score=57.76 Aligned_cols=65 Identities=12% Similarity=0.142 Sum_probs=52.3
Q ss_pred cCC--CHHHHHHHHHHHHCCCcEEEEEeCCcch----hhhc-CCceEEEEccCCCHHHHHHhh--------cCCcEEEEc
Q 028418 106 DGD--SDIGQMVILSLIVKRTRIKALVKDKRNA----MESF-GTYVESMAGDASNKKFLKTAL--------RGVRSIICP 170 (209)
Q Consensus 106 GAT--GfIG~~VV~~Ll~~G~~VraLvR~~~~a----~~~~-~~~vevv~GDl~D~~sL~~AL--------~GvDaVIh~ 170 (209)
|++ +.||+.++++|+++|++|.+..|+.++. .... ..+.+++..|++|++++.+++ ..+|.+||+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 666 9999999999999999999999999863 1111 123567999999999888874 467999987
No 330
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.27 E-value=0.0019 Score=57.86 Aligned_cols=68 Identities=9% Similarity=0.023 Sum_probs=51.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++++|+|+ |.+|+.+++.|...|.+|.+..|++++.......+.+.+ +.+.+.+.++++|.||.+
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDiVint 216 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-----PLNKLEEKVAEIDIVINT 216 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-----cHHHHHHHhccCCEEEEC
Confidence 34679999998 889999999999999999999998865433222222222 245577888999999976
No 331
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.27 E-value=0.0031 Score=57.90 Aligned_cols=99 Identities=13% Similarity=0.174 Sum_probs=69.8
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCc---------------------chh------hhcCCc--eE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---------------------NAM------ESFGTY--VE 145 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~---------------------~a~------~~~~~~--ve 145 (209)
.....+|||.|+ |-+|+++++.|...|+ ++++++++.- ++. ....++ ++
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~ 99 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV 99 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence 445678999997 6699999999999998 6777777641 111 111233 56
Q ss_pred EEEccCCCHHHHHHhhcCCcEEEEcChh-----HHHHHHHhCCCCEEEEeccccccc
Q 028418 146 SMAGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 146 vv~GDl~D~~sL~~AL~GvDaVIh~a~g-----~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
.+..|++ ++.+.+.++++|.||.+.+. .+-++|++.+++ +||.+..+.+|
T Consensus 100 ~~~~~~~-~~~~~~~~~~~DlVid~~D~~~~r~~in~~~~~~~ip-~i~~~~~g~~G 154 (338)
T PRK12475 100 PVVTDVT-VEELEELVKEVDLIIDATDNFDTRLLINDLSQKYNIP-WIYGGCVGSYG 154 (338)
T ss_pred EEeccCC-HHHHHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEEEecccEE
Confidence 6777775 55788899999999988321 155778888876 67777666555
No 332
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.26 E-value=0.0016 Score=60.31 Aligned_cols=81 Identities=16% Similarity=0.129 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-h----hhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-A----MESFGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a----~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
..++|+|+|+.+ +|..+++.|+++|++|.+..++... . ..+...+++++.+|..+ +.+.++|+||...
T Consensus 4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~g 77 (450)
T PRK14106 4 KGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSPG 77 (450)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECCC
Confidence 457899999888 9999999999999999999987532 2 11222357888888876 3467899999872
Q ss_pred ---hhHHHHHHHhCCC
Q 028418 172 ---EGFISNAGSLKGV 184 (209)
Q Consensus 172 ---~g~ll~AA~~aGV 184 (209)
....+.+|++.|+
T Consensus 78 ~~~~~~~~~~a~~~~i 93 (450)
T PRK14106 78 VPLDSPPVVQAHKKGI 93 (450)
T ss_pred CCCCCHHHHHHHHCCC
Confidence 1125566666554
No 333
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=97.24 E-value=0.00038 Score=59.19 Aligned_cols=65 Identities=18% Similarity=0.128 Sum_probs=48.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCC--------ce--EEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--------YV--ESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~--------~v--evv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
|+|.|+|++|.+|+.++..|.++||+|.+..|++++....... ++ .+.. . ...++++.+|.||.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~---~---~~~ea~~~aDvVil 74 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG---A---DNAEAAKRADVVIL 74 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE---e---ChHHHHhcCCEEEE
Confidence 5799999999999999999999999999999988765432110 11 1111 1 22567889999998
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 75 a 75 (219)
T TIGR01915 75 A 75 (219)
T ss_pred E
Confidence 7
No 334
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=97.24 E-value=0.004 Score=54.90 Aligned_cols=72 Identities=21% Similarity=0.229 Sum_probs=56.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCC--ceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGT--YVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~--~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
.+..+||||+..||+.|...|..+|++|.+..++...++. .++. +--.+.+|+.+++.++..|+ -.+.
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 4578999999999999999999999999999988865542 2332 34568999999998877554 3577
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
++.|
T Consensus 94 lVnc 97 (256)
T KOG1200|consen 94 LVNC 97 (256)
T ss_pred EEEc
Confidence 7777
No 335
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.22 E-value=0.0039 Score=57.29 Aligned_cols=101 Identities=18% Similarity=0.245 Sum_probs=71.9
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCC---------------------cchh------hhcCCc--e
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK---------------------RNAM------ESFGTY--V 144 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~---------------------~~a~------~~~~~~--v 144 (209)
+...+.+|||.|+ |.+|+.++..|...|. ++++++++. .++. ....+. +
T Consensus 20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v 98 (339)
T PRK07688 20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV 98 (339)
T ss_pred HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence 3455778999998 8999999999999998 788888763 1111 111233 4
Q ss_pred EEEEccCCCHHHHHHhhcCCcEEEEcCh--h---HHHHHHHhCCCCEEEEecccccccC
Q 028418 145 ESMAGDASNKKFLKTALRGVRSIICPSE--G---FISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 145 evv~GDl~D~~sL~~AL~GvDaVIh~a~--g---~ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
+.+..+++ ++.+.+.++++|.||.+.+ . .+-++|.+.++. +||.++.+.+|.
T Consensus 99 ~~~~~~~~-~~~~~~~~~~~DlVid~~Dn~~~r~~ln~~~~~~~iP-~i~~~~~g~~G~ 155 (339)
T PRK07688 99 EAIVQDVT-AEELEELVTGVDLIIDATDNFETRFIVNDAAQKYGIP-WIYGACVGSYGL 155 (339)
T ss_pred EEEeccCC-HHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHhCCC-EEEEeeeeeeeE
Confidence 56666765 4567788999999998832 1 267788888865 788887776654
No 336
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=97.19 E-value=0.00093 Score=60.98 Aligned_cols=64 Identities=17% Similarity=0.118 Sum_probs=46.6
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-------cEEEEEeCCcchhhhcCCceEEEEccCCCHH-----------HHHHhhc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRNAMESFGTYVESMAGDASNKK-----------FLKTALR 162 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~-------~VraLvR~~~~a~~~~~~~vevv~GDl~D~~-----------sL~~AL~ 162 (209)
+|.|+||+|+||++++..|..++. +++.+++++.... .+....|+.|.. ...++++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~------a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~ 74 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV------LEGVVMELMDCAFPLLDGVVPTHDPAVAFT 74 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc------cceeEeehhcccchhcCceeccCChHHHhC
Confidence 589999999999999999987553 5888887554311 122344444443 3468999
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
++|.|||+
T Consensus 75 ~aDiVVit 82 (324)
T TIGR01758 75 DVDVAILV 82 (324)
T ss_pred CCCEEEEc
Confidence 99999998
No 337
>PRK10537 voltage-gated potassium channel; Provisional
Probab=97.14 E-value=0.0042 Score=58.32 Aligned_cols=69 Identities=19% Similarity=0.251 Sum_probs=57.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~ 170 (209)
++.++|.|. |.+|+.++++|.++|++|+++..+.. +.....+..++.||.+|++.|++| ++.+++|+.+
T Consensus 240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~--~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~ 309 (393)
T PRK10537 240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL--EHRLPDDADLIPGDSSDSAVLKKAGAARARAILAL 309 (393)
T ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh--hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEc
Confidence 567888886 68999999999999999999986532 334445688999999999999876 5789999987
No 338
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.10 E-value=0.00078 Score=53.54 Aligned_cols=71 Identities=21% Similarity=0.277 Sum_probs=53.8
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchhhh---c-CCceEEEEccCCCHHHHHHhhcCCcEEE
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMES---F-GTYVESMAGDASNKKFLKTALRGVRSII 168 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~~~---~-~~~vevv~GDl~D~~sL~~AL~GvDaVI 168 (209)
..+...+++||.|| |.+|+.++..|...|.+ |.++.|+.+++..+ + +..++++. +. .+.+++..+|.||
T Consensus 7 ~~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~--~~---~~~~~~~~~DivI 80 (135)
T PF01488_consen 7 FGDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIP--LE---DLEEALQEADIVI 80 (135)
T ss_dssp HSTGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEE--GG---GHCHHHHTESEEE
T ss_pred cCCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceee--HH---HHHHHHhhCCeEE
Confidence 34667889999998 88999999999999987 99999998877543 2 12244443 33 4557889999999
Q ss_pred Ec
Q 028418 169 CP 170 (209)
Q Consensus 169 h~ 170 (209)
++
T Consensus 81 ~a 82 (135)
T PF01488_consen 81 NA 82 (135)
T ss_dssp E-
T ss_pred Ee
Confidence 98
No 339
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.10 E-value=0.0038 Score=53.77 Aligned_cols=93 Identities=16% Similarity=0.107 Sum_probs=58.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC-HHHHHHhhcCCcEEEEcChh---
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSEG--- 173 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D-~~sL~~AL~GvDaVIh~a~g--- 173 (209)
+..++||+||+|.+|..+++.+...|.+|.+++|++++.......++..+. +..+ .+.+.+. .++|.||++..+
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~d~v~~~~g~~~~ 239 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVI-DGSKFSEDVKKL-GGADVVIELVGSPTI 239 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEE-ecHHHHHHHHhc-cCCCEEEECCChHHH
Confidence 466899999999999999999999999999999877654322111222111 2222 2233333 389999987321
Q ss_pred -HHHHHHHhCCCCEEEEecccc
Q 028418 174 -FISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 174 -~ll~AA~~aGVkriV~vSS~~ 194 (209)
..+++.... .++|.++...
T Consensus 240 ~~~~~~~~~~--g~~v~~g~~~ 259 (332)
T cd08259 240 EESLRSLNKG--GRLVLIGNVT 259 (332)
T ss_pred HHHHHHhhcC--CEEEEEcCCC
Confidence 133333333 4688776543
No 340
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=97.07 E-value=0.0063 Score=53.86 Aligned_cols=89 Identities=16% Similarity=0.131 Sum_probs=71.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC-----
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS----- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a----- 171 (209)
+++|||.|||+- |+.|++.|.++|++|.+-+-...... ....+.++.|-+.|.+.+.+-++ ++++||-..
T Consensus 2 ~~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~~--~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~ 78 (248)
T PRK08057 2 MPRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGGP--ADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYAA 78 (248)
T ss_pred CceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCCc--ccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccHH
Confidence 578999999985 89999999999999998886554331 12357889999999999999996 889999662
Q ss_pred --hhHHHHHHHhCCCCEEEEe
Q 028418 172 --EGFISNAGSLKGVQHVILL 190 (209)
Q Consensus 172 --~g~ll~AA~~aGVkriV~v 190 (209)
..++.++|++.++..+=|.
T Consensus 79 ~is~~a~~ac~~~~ipyiR~e 99 (248)
T PRK08057 79 QISANAAAACRALGIPYLRLE 99 (248)
T ss_pred HHHHHHHHHHHHhCCcEEEEe
Confidence 2348899999999888776
No 341
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=97.07 E-value=0.0026 Score=58.23 Aligned_cols=68 Identities=15% Similarity=0.195 Sum_probs=55.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
+++|+|.|+ |.+|+.++..+.+.|++|.+++.++........ -+.+.+|+.|++.+.+..+.||+|..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~a--d~~~~~~~~D~~~l~~~a~~~dvit~ 69 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVA--DEVIVADYDDVAALRELAEQCDVITY 69 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhC--ceEEecCCCCHHHHHHHHhcCCEEEe
Confidence 578999998 799999999999999999999976644222222 25677999999999999999998754
No 342
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.01 E-value=0.01 Score=53.23 Aligned_cols=37 Identities=8% Similarity=-0.056 Sum_probs=31.9
Q ss_pred cCCCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeC
Q 028418 96 EEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKD 132 (209)
Q Consensus 96 ~~~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~ 132 (209)
+..++++|||||+ .-||+.++++|.++|++|.+..|.
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 3457899999995 899999999999999999987643
No 343
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.01 E-value=0.0046 Score=57.88 Aligned_cols=88 Identities=16% Similarity=0.103 Sum_probs=54.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHH-CCCc---EEEEEeCCcchhh--hcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIV-KRTR---IKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~-~G~~---VraLvR~~~~a~~--~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
|.+|.|.||||++|+.+++.|++ +..+ ++.+.... .... .+.. -+....+..|++. ++++|.||.+.
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~-sg~~~~~f~g-~~~~v~~~~~~~~----~~~~Divf~a~~ 74 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQ-AGGAAPSFGG-KEGTLQDAFDIDA----LKKLDIIITCQG 74 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchh-hCCcccccCC-CcceEEecCChhH----hcCCCEEEECCC
Confidence 46799999999999999985554 5666 67655322 1111 1221 1233444555443 47899999973
Q ss_pred hhH---HHHHHHhCCCC-EEEEecc
Q 028418 172 EGF---ISNAGSLKGVQ-HVILLSQ 192 (209)
Q Consensus 172 ~g~---ll~AA~~aGVk-riV~vSS 192 (209)
.+. +...+.++|++ .+|=.||
T Consensus 75 ~~~s~~~~~~~~~aG~~~~VID~Ss 99 (369)
T PRK06598 75 GDYTNEVYPKLRAAGWQGYWIDAAS 99 (369)
T ss_pred HHHHHHHHHHHHhCCCCeEEEECCh
Confidence 222 66667778885 4555554
No 344
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=96.99 E-value=0.0067 Score=55.09 Aligned_cols=95 Identities=12% Similarity=0.101 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhhc--CCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTALR--GVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL~--GvDaVIh~a 171 (209)
.+.++|||+||+|-+|+..++.+...|+.+.+.+.+.++.......+.+.+. |+.+.+ .+++... |+|.||.+.
T Consensus 141 ~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi-~y~~~~~~~~v~~~t~g~gvDvv~D~v 219 (326)
T COG0604 141 KPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVI-NYREEDFVEQVRELTGGKGVDVVLDTV 219 (326)
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEE-cCCcccHHHHHHHHcCCCCceEEEECC
Confidence 4478999999999999999998889998888888766554433222332222 244433 3334443 699999883
Q ss_pred -hhH---HHHHHHhCCCCEEEEecccc
Q 028418 172 -EGF---ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 172 -~g~---ll~AA~~aGVkriV~vSS~~ 194 (209)
..+ .+++ ...+ .++|.+...+
T Consensus 220 G~~~~~~~l~~-l~~~-G~lv~ig~~~ 244 (326)
T COG0604 220 GGDTFAASLAA-LAPG-GRLVSIGALS 244 (326)
T ss_pred CHHHHHHHHHH-hccC-CEEEEEecCC
Confidence 222 2323 3445 6777765543
No 345
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.98 E-value=0.0021 Score=56.13 Aligned_cols=86 Identities=10% Similarity=0.132 Sum_probs=57.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh----hcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC----
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~----~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (209)
||+...++||.||+.++++|...||+|..-.|+.++... .+.+. --..+..+|.+.+|+||...
T Consensus 1 m~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~--------i~~~~~~dA~~~aDVVvLAVP~~a 72 (211)
T COG2085 1 MMIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL--------ITGGSNEDAAALADVVVLAVPFEA 72 (211)
T ss_pred CcEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc--------cccCChHHHHhcCCEEEEeccHHH
Confidence 466777899999999999999999999999766654322 22222 22335678999999999872
Q ss_pred -hhHHHHHHHhCCCCEEEEecccc
Q 028418 172 -EGFISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 172 -~g~ll~AA~~aGVkriV~vSS~~ 194 (209)
.+++-+.....+ .+||.-.+-.
T Consensus 73 ~~~v~~~l~~~~~-~KIvID~tnp 95 (211)
T COG2085 73 IPDVLAELRDALG-GKIVIDATNP 95 (211)
T ss_pred HHhHHHHHHHHhC-CeEEEecCCC
Confidence 222333333345 5777555443
No 346
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=96.96 E-value=0.0026 Score=58.91 Aligned_cols=72 Identities=11% Similarity=0.032 Sum_probs=55.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+..+|+|.|+ |-+|+.+++.|...|.+|.++.|++++...........+..+..+++.+.++++++|.||.+
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a 237 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGA 237 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEc
Confidence 3456999987 99999999999999999999999876644321111122345667888999999999999987
No 347
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.96 E-value=0.0014 Score=51.57 Aligned_cols=69 Identities=16% Similarity=0.067 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcCC-ceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~~-~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..++|+|+|+ |.+|+.+++.|...| ++|.+..|++++....... ....+..+..+ ..++++++|.||.+
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvvi~~ 88 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLIINT 88 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEEEeC
Confidence 3568999998 999999999999986 8899999988765432110 11111223333 34458899999988
No 348
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=96.93 E-value=0.0066 Score=54.04 Aligned_cols=71 Identities=18% Similarity=0.277 Sum_probs=53.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHH-CCCcEE-EEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc---------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIV-KRTRIK-ALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR--------- 162 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~-~G~~Vr-aLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~--------- 162 (209)
+.|+||||+-.||--||++|+. .|.++. +..|+++++... ..+++.+++.|+++-+++.++.+
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~ 83 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD 83 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence 3599999999999999999986 455554 445778874321 25789999999999999888864
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
|++.+|..
T Consensus 84 GlnlLinN 91 (249)
T KOG1611|consen 84 GLNLLINN 91 (249)
T ss_pred CceEEEec
Confidence 55666554
No 349
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.92 E-value=0.0012 Score=53.11 Aligned_cols=91 Identities=13% Similarity=0.104 Sum_probs=49.4
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEE-eCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-Ch
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SE 172 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLv-R~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~ 172 (209)
.+.++.+|-|.|| |.+|.+|.+.|.++||+|..+. |+.+.+..... . .++ .....+.+.++.+|.+|.+ .+
T Consensus 6 ~~~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~----~-~~~-~~~~~~~~~~~~aDlv~iavpD 78 (127)
T PF10727_consen 6 TQAARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAA----F-IGA-GAILDLEEILRDADLVFIAVPD 78 (127)
T ss_dssp ------EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC-------TT------TTGGGCC-SEEEE-S-C
T ss_pred cCCCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccc----c-ccc-ccccccccccccCCEEEEEech
Confidence 4778899999998 9999999999999999998875 66544432211 0 011 1112345678899999987 23
Q ss_pred hH---HHHHHHhC----CCCEEEEecc
Q 028418 173 GF---ISNAGSLK----GVQHVILLSQ 192 (209)
Q Consensus 173 g~---ll~AA~~a----GVkriV~vSS 192 (209)
.. +.+..... .=+-|||+|-
T Consensus 79 daI~~va~~La~~~~~~~g~iVvHtSG 105 (127)
T PF10727_consen 79 DAIAEVAEQLAQYGAWRPGQIVVHTSG 105 (127)
T ss_dssp CHHHHHHHHHHCC--S-TT-EEEES-S
T ss_pred HHHHHHHHHHHHhccCCCCcEEEECCC
Confidence 22 33333332 1145677774
No 350
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.85 E-value=0.011 Score=53.06 Aligned_cols=67 Identities=10% Similarity=0.033 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..++++|.|+ |.+|+.++..|...|.+|.+..|++++.......+.+++ +.+.+.+.++++|.||.+
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t 217 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-----HLSELAEEVGKIDIIFNT 217 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-----cHHHHHHHhCCCCEEEEC
Confidence 4679999997 889999999999999999999998765432222233332 235677889999999987
No 351
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=96.85 E-value=0.0039 Score=50.19 Aligned_cols=64 Identities=17% Similarity=0.234 Sum_probs=47.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchhh----------hcCCceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~~----------~~~~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
++|.|+||+|.+|++++..|..++ .+++.+++++.++.. .....+.+..++ .++++++|.|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-------~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-------YEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-------GGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc-------ccccccccEE
Confidence 589999999999999999998876 579999988654421 111223333333 5679999999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
|.+
T Consensus 74 vit 76 (141)
T PF00056_consen 74 VIT 76 (141)
T ss_dssp EET
T ss_pred EEe
Confidence 998
No 352
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=96.79 E-value=0.0069 Score=55.03 Aligned_cols=70 Identities=11% Similarity=0.108 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~ 170 (209)
.+++|||+|+ |..|+.++..+.+.|++|.++..++........ -..+..|..|++.+.+.++ ++|.|+..
T Consensus 11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~~id~vi~~ 82 (395)
T PRK09288 11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA--HRSHVIDMLDGDALRAVIEREKPDYIVPE 82 (395)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh--hheEECCCCCHHHHHHHHHHhCCCEEEEe
Confidence 4568999986 789999999999999999999987754322221 1357788999999999988 89999865
No 353
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.75 E-value=0.015 Score=54.07 Aligned_cols=89 Identities=18% Similarity=0.190 Sum_probs=54.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHH-CCCc---EEEEEeCCcchhh-hcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTR---IKALVKDKRNAME-SFGTYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~-~G~~---VraLvR~~~~a~~-~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a 171 (209)
+..+|.|.||||++|+.+++.|.+ ...+ ++.+....+.-+. .+.. -+...-++ |++ .+.++|.||.+ .
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~-~~l~v~~~-~~~----~~~~~Divf~a~~ 77 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKG-REIIIQEA-KIN----SFEGVDIAFFSAG 77 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCC-cceEEEeC-CHH----HhcCCCEEEECCC
Confidence 346899999999999999998884 6777 6666633221111 1211 12333333 333 35789999987 2
Q ss_pred hhH---HHHHHHhCCCCEEEEeccc
Q 028418 172 EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 ~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
.+. ++..+.++|. .+|=.|+.
T Consensus 78 ~~~s~~~~~~~~~~G~-~VID~Ss~ 101 (347)
T PRK06728 78 GEVSRQFVNQAVSSGA-IVIDNTSE 101 (347)
T ss_pred hHHHHHHHHHHHHCCC-EEEECchh
Confidence 332 5666667773 45555553
No 354
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=96.75 E-value=0.0039 Score=55.02 Aligned_cols=93 Identities=12% Similarity=0.058 Sum_probs=57.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC-CceEEEEccCCCH----HHHHHhh-cCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNK----KFLKTAL-RGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~----~sL~~AL-~GvDaVIh~ 170 (209)
.+.++|||+||+|.+|..+++.+...|.+|.++++++++...... .+++.+ .|..+. +.+.+.. .|+|.||.+
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d~ 228 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDA-FNYKEEPDLDAALKRYFPNGIDIYFDN 228 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCcee-EEcCCcccHHHHHHHhCCCCcEEEEEC
Confidence 456799999999999999999888999999999988776543211 123222 122221 2223222 479999987
Q ss_pred ChhH----HHHHHHhCCCCEEEEecc
Q 028418 171 SEGF----ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 171 a~g~----ll~AA~~aGVkriV~vSS 192 (209)
..+. .++..+.. .+||.++.
T Consensus 229 ~g~~~~~~~~~~l~~~--G~iv~~G~ 252 (338)
T cd08295 229 VGGKMLDAVLLNMNLH--GRIAACGM 252 (338)
T ss_pred CCHHHHHHHHHHhccC--cEEEEecc
Confidence 3222 33333333 46776653
No 355
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=96.73 E-value=0.0037 Score=55.82 Aligned_cols=73 Identities=21% Similarity=0.226 Sum_probs=58.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh------hhc-CCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESF-GTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~------~~~-~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++.++|||+.|.||..+..+|+++|..+.++.-+.+..+ ... ...+-+++.|+++...++++++ .
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 3678999999999999999999999999988886555432 111 1347899999999999999986 4
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.+|.-
T Consensus 84 iDIlINg 90 (261)
T KOG4169|consen 84 IDILING 90 (261)
T ss_pred eEEEEcc
Confidence 5888865
No 356
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=96.69 E-value=0.0092 Score=54.66 Aligned_cols=77 Identities=16% Similarity=0.129 Sum_probs=50.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-ChhH--
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF-- 174 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g~-- 174 (209)
+.+|.|.||||++|+.+++.|.++. .++..+..+..+ ++.+ ....+.++|.||.+ ..+.
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~--------------~~~~---~~~~~~~~DvvFlalp~~~s~ 64 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK--------------DAAA---RRELLNAADVAILCLPDDAAR 64 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC--------------cccC---chhhhcCCCEEEECCCHHHHH
Confidence 4589999999999999999777654 355555433222 1111 23456789999987 3333
Q ss_pred -HHHHHHhCCCCEEEEeccc
Q 028418 175 -ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 -ll~AA~~aGVkriV~vSS~ 193 (209)
++..+.+.|+ +||=+|+.
T Consensus 65 ~~~~~~~~~g~-~VIDlSad 83 (313)
T PRK11863 65 EAVALIDNPAT-RVIDASTA 83 (313)
T ss_pred HHHHHHHhCCC-EEEECChh
Confidence 5566666775 47777753
No 357
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=96.65 E-value=0.0038 Score=54.04 Aligned_cols=60 Identities=7% Similarity=0.093 Sum_probs=42.9
Q ss_pred EcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh-------cCCcEEEEc
Q 028418 105 TDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIICP 170 (209)
Q Consensus 105 TGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL-------~GvDaVIh~ 170 (209)
-.+||.||++++++|.++|++|.++.|... .. .. .....|+.|.+++.+.+ ..+|++||+
T Consensus 21 N~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~-~~----~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnn 87 (227)
T TIGR02114 21 NHSTGHLGKIITETFLSAGHEVTLVTTKRA-LK-PE----PHPNLSIREIETTKDLLITLKELVQEHDILIHS 87 (227)
T ss_pred CCcccHHHHHHHHHHHHCCCEEEEEcChhh-cc-cc----cCCcceeecHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 345999999999999999999998876321 11 10 11346888877766543 468999998
No 358
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=96.64 E-value=0.0069 Score=56.88 Aligned_cols=69 Identities=13% Similarity=0.109 Sum_probs=53.1
Q ss_pred CCCCeEEEEcC----------------CCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHH-HH
Q 028418 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFL-KT 159 (209)
Q Consensus 97 ~~~~~ILVTGA----------------TGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL-~~ 159 (209)
...++|||||+ ||.+|..+++.|..+|++|.++.++.... .+.+ +...|+.+.+.+ .+
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~~~~--~~~~~v~~~~~~~~~ 257 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---TPPG--VKSIKVSTAEEMLEA 257 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---CCCC--cEEEEeccHHHHHHH
Confidence 45689999999 57899999999999999999998766432 2222 356788888887 43
Q ss_pred hh----cCCcEEEEc
Q 028418 160 AL----RGVRSIICP 170 (209)
Q Consensus 160 AL----~GvDaVIh~ 170 (209)
++ ..+|++|++
T Consensus 258 ~~~~~~~~~D~~i~~ 272 (390)
T TIGR00521 258 ALNELAKDFDIFISA 272 (390)
T ss_pred HHHhhcccCCEEEEc
Confidence 44 368999998
No 359
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=96.59 E-value=0.026 Score=49.95 Aligned_cols=90 Identities=17% Similarity=0.125 Sum_probs=68.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh--hcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC----
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALR--GVRSIICPS---- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~--~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a---- 171 (209)
|+|||.|||+- |+.|+..|.++|+ |.+-+-....... ......+++.|-+.|.+.+.+-++ +++.||-.+
T Consensus 1 m~ILvlgGTtE-~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPfA 78 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPFA 78 (249)
T ss_pred CEEEEEechHH-HHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCchH
Confidence 68999999986 7899999999999 6655533322221 122457899999999999999995 899999662
Q ss_pred ---hhHHHHHHHhCCCCEEEEec
Q 028418 172 ---EGFISNAGSLKGVQHVILLS 191 (209)
Q Consensus 172 ---~g~ll~AA~~aGVkriV~vS 191 (209)
..++.++|++.|+..+-|.=
T Consensus 79 ~~is~na~~a~~~~~ipylR~eR 101 (249)
T PF02571_consen 79 AEISQNAIEACRELGIPYLRFER 101 (249)
T ss_pred HHHHHHHHHHHhhcCcceEEEEc
Confidence 23478899999998877753
No 360
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=96.59 E-value=0.017 Score=53.31 Aligned_cols=89 Identities=13% Similarity=0.111 Sum_probs=53.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC---cEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHHHhhcCCcEEEEc-Ch
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICP-SE 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~---~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~ 172 (209)
...+|.|.||||++|+.+++.|.++.| +++.+..+.+.-+.. +... ++..-++ + ...+.++|.||.+ ..
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~-~~~v~~~---~--~~~~~~~Dvvf~a~p~ 76 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGK-SVTVQDA---A--EFDWSQAQLAFFVAGR 76 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCc-ceEEEeC---c--hhhccCCCEEEECCCH
Confidence 456899999999999999998888654 566665432211111 2111 1111132 2 1235789999987 33
Q ss_pred hH---HHHHHHhCCCCEEEEeccc
Q 028418 173 GF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 173 g~---ll~AA~~aGVkriV~vSS~ 193 (209)
+. ++..+.++|+ ++|=+|+.
T Consensus 77 ~~s~~~~~~~~~~g~-~VIDlS~~ 99 (336)
T PRK08040 77 EASAAYAEEATNAGC-LVIDSSGL 99 (336)
T ss_pred HHHHHHHHHHHHCCC-EEEECChH
Confidence 32 5666666776 46666653
No 361
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=96.58 E-value=0.0035 Score=55.17 Aligned_cols=71 Identities=14% Similarity=0.126 Sum_probs=48.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCc--eEEE-----EccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTY--VESM-----AGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~--vevv-----~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|++|.|.|+ |.+|..++..|...|++|.+..|+++........+ .... ...+.-..+..++++++|.||.+
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 78 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVA 78 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEe
Confidence 468999985 99999999999999999999999876543221110 0000 00111122455678899999987
No 362
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.57 E-value=0.0052 Score=58.12 Aligned_cols=64 Identities=16% Similarity=0.082 Sum_probs=47.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|+|+||+|.+|+.+++.|.++|++|.+..|+++..... ...++++ .....+++.++|.||.+
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-------~~~~~e~~~~aDvVIla 65 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-------ANDNIDAAKDADIVIIS 65 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-------ccCHHHHhccCCEEEEe
Confidence 5799999999999999999999999999999988664221 1112221 12245677888998877
No 363
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.56 E-value=0.0054 Score=56.75 Aligned_cols=35 Identities=17% Similarity=0.399 Sum_probs=32.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~ 133 (209)
.++|.|.||+|.+|+.+++.|..+|++|++..|++
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 46899999999999999999999999999999853
No 364
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.56 E-value=0.0027 Score=56.08 Aligned_cols=71 Identities=17% Similarity=0.137 Sum_probs=48.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...+++||+|+ |.+|+.++..|...| .+|.++.|+.+++.......-......+ + ..+.+++..+|.||.+
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~-~~~~~~~~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D-LELQEELADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c-ccchhccccCCEEEEC
Confidence 44568999997 999999999999999 7899999998776433210000000111 0 0234567788999887
No 365
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=96.56 E-value=0.005 Score=55.77 Aligned_cols=101 Identities=13% Similarity=0.060 Sum_probs=70.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHH-CCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEc-C--
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP-S-- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~-~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~-a-- 171 (209)
.-++|||||+-|.+|.-++..|.. -|-+-+.|..=.++....+. .--++..|+.|...|++.+- -+|.+||. +
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~-~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSALL 121 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTD-VGPYIYLDILDQKSLEEIVVNKRIDWLVHFSALL 121 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcc-cCCchhhhhhccccHHHhhcccccceeeeHHHHH
Confidence 456899999999999999987765 36666665521111111221 12367889999999999885 46889997 1
Q ss_pred ----------------hh--HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 ----------------EG--FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 ----------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.| ++++.|++...+-|| -|+++++|.+.
T Consensus 122 SAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFV-PSTIGAFGPtS 167 (366)
T KOG2774|consen 122 SAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFV-PSTIGAFGPTS 167 (366)
T ss_pred HHhcccCCceeeeecchhhhHHHHHHHHcCeeEee-cccccccCCCC
Confidence 12 289999999887555 58899988763
No 366
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.55 E-value=0.022 Score=48.24 Aligned_cols=99 Identities=13% Similarity=0.132 Sum_probs=67.2
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCC-------------------cchh------hhcCCceE--EE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAM------ESFGTYVE--SM 147 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~-------------------~~a~------~~~~~~ve--vv 147 (209)
...+.+|||.| .|-+|+++++.|...|. ++++++++. .++. ....++++ .+
T Consensus 18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~ 96 (202)
T TIGR02356 18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL 96 (202)
T ss_pred HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 45567899998 67799999999999997 788888662 1111 11223333 34
Q ss_pred EccCCCHHHHHHhhcCCcEEEEcCh--h---HHHHHHHhCCCCEEEEeccccccc
Q 028418 148 AGDASNKKFLKTALRGVRSIICPSE--G---FISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a~--g---~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
...+ +++.+.+.++++|.||.+.. . .+-++|++.++. +|+.+..+.+|
T Consensus 97 ~~~i-~~~~~~~~~~~~D~Vi~~~d~~~~r~~l~~~~~~~~ip-~i~~~~~g~~G 149 (202)
T TIGR02356 97 KERV-TAENLELLINNVDLVLDCTDNFATRYLINDACVALGTP-LISAAVVGFGG 149 (202)
T ss_pred hhcC-CHHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEeccCeE
Confidence 4444 44667888999999998831 1 266788888864 77777655554
No 367
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.54 E-value=0.0037 Score=56.41 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=30.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCc--EEEEEeCC
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTR--IKALVKDK 133 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~--VraLvR~~ 133 (209)
++|.|+||||.+|.+++..|+..|+. |.+++|++
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 58999999999999999999999875 99999855
No 368
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2. This enzyme is an alternative to PurN (TIGR00639)
Probab=96.52 E-value=0.012 Score=53.31 Aligned_cols=67 Identities=12% Similarity=0.110 Sum_probs=54.1
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~ 170 (209)
+|+|.| +|..|..+++.+.+.|++|.++..++......+. -+.+..|..|++.+.+.++ ++|.|+..
T Consensus 1 kililG-~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~~id~v~~~ 69 (380)
T TIGR01142 1 RVLLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA--HRSYVINMLDGDALRAVIEREKPDYIVPE 69 (380)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhC--ceEEEcCCCCHHHHHHHHHHhCCCEEEec
Confidence 589999 5999999999999999999999987754322222 2566789999999998887 89998864
No 369
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.49 E-value=0.0041 Score=58.31 Aligned_cols=69 Identities=16% Similarity=0.134 Sum_probs=52.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..+.++|+|.|+ |.+|+.+++.|...| .+|.+..|+++++..... -+...+ +.+.+.+++.++|.||.+
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i-----~~~~l~~~l~~aDvVi~a 247 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAV-----KFEDLEEYLAEADIVISS 247 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEe-----eHHHHHHHHhhCCEEEEC
Confidence 356689999997 999999999999999 789999998876542211 011222 335678889999999988
No 370
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=96.48 E-value=0.0066 Score=53.18 Aligned_cols=93 Identities=9% Similarity=0.029 Sum_probs=57.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC---HHHHHHhh--cCCcEEEEcCh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTAL--RGVRSIICPSE 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D---~~sL~~AL--~GvDaVIh~a~ 172 (209)
+..+|||+||+|.+|..+++.+...|.+|.++++++++.......+++.+ .|..+ .....+.+ +|+|.||.+.-
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~gvdvv~d~~G 216 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVA-FNYKTVKSLEETLKKASPDGYDCYFDNVG 216 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeccccccHHHHHHHhCCCCeEEEEECCC
Confidence 46799999999999999999888899999999988766443222223222 12222 22222222 37899998732
Q ss_pred h-H---HHHHHHhCCCCEEEEeccc
Q 028418 173 G-F---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 173 g-~---ll~AA~~aGVkriV~vSS~ 193 (209)
+ . .++..+ .-.|||.++..
T Consensus 217 ~~~~~~~~~~l~--~~G~iv~~G~~ 239 (325)
T TIGR02825 217 GEFSNTVIGQMK--KFGRIAICGAI 239 (325)
T ss_pred HHHHHHHHHHhC--cCcEEEEecch
Confidence 2 2 222222 22467766543
No 371
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=96.46 E-value=0.041 Score=54.04 Aligned_cols=77 Identities=12% Similarity=0.143 Sum_probs=59.2
Q ss_pred CCccccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 91 EDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 91 ~~~~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+.+++...+++|+|.|+. .+|+.++..+.+.|++|.+++.++......+. -+.+.+|+.|++.+.+..+.+|+|...
T Consensus 14 ~~~~~~~~~k~IgIIGgG-qlg~mla~aA~~lG~~Vi~ld~~~~apa~~~A--D~~~v~~~~D~~~l~~~a~~~dvIt~e 90 (577)
T PLN02948 14 VKPVHGVSETVVGVLGGG-QLGRMLCQAASQMGIKVKVLDPLEDCPASSVA--ARHVVGSFDDRAAVREFAKRCDVLTVE 90 (577)
T ss_pred CccccCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchhhhC--ceeeeCCCCCHHHHHHHHHHCCEEEEe
Confidence 334445677899999975 99999999999999999999877653222221 246679999999999988889987543
No 372
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.44 E-value=0.0045 Score=55.70 Aligned_cols=68 Identities=19% Similarity=0.121 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+.++|+|.|+ |.+|+.+++.|...| .+|.+..|+++++..... -+.. +.+.+.+.+++..+|.||.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~-----~~~~~~~~~~l~~aDvVi~a 245 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN-----AVPLDELLELLNEADVVISA 245 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe-----EEeHHHHHHHHhcCCEEEEC
Confidence 46789999998 999999999998866 678889998876543211 1122 23345678889999999998
No 373
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=96.43 E-value=0.013 Score=53.69 Aligned_cols=75 Identities=15% Similarity=0.114 Sum_probs=49.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-ChhH---
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF--- 174 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g~--- 174 (209)
.+|.|.||||++|..+++.|... ..++..+.-+.. + +..+ ..+.++++|.||.+ ..+.
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~-----~---------~~~~---~~~~~~~~D~vFlalp~~~s~~ 64 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR-----K---------DAAE---RAKLLNAADVAILCLPDDAARE 64 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc-----c---------CcCC---HhHhhcCCCEEEECCCHHHHHH
Confidence 47999999999999999988775 345655542211 1 1112 34566889999987 3332
Q ss_pred HHHHHHhCCCCEEEEecc
Q 028418 175 ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 175 ll~AA~~aGVkriV~vSS 192 (209)
++..+.++|+ +||=+|+
T Consensus 65 ~~~~~~~~g~-~VIDlSa 81 (310)
T TIGR01851 65 AVSLVDNPNT-CIIDAST 81 (310)
T ss_pred HHHHHHhCCC-EEEECCh
Confidence 5555666675 4777775
No 374
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.36 E-value=0.0057 Score=57.34 Aligned_cols=69 Identities=23% Similarity=0.244 Sum_probs=51.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+.++|+|.|+ |.+|+.+++.|...|. +|.+..|+++++...... . .+++.+.+.+.+++.++|.||.+
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~-~---g~~~~~~~~~~~~l~~aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE-F---GGEAIPLDELPEALAEADIVISS 249 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH-c---CCcEeeHHHHHHHhccCCEEEEC
Confidence 46689999987 9999999999999997 788999988765432111 0 01233446677889999999988
No 375
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=96.35 E-value=0.018 Score=48.90 Aligned_cols=60 Identities=10% Similarity=0.060 Sum_probs=39.0
Q ss_pred cCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh----hcCCcEEEEc
Q 028418 106 DGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA----LRGVRSIICP 170 (209)
Q Consensus 106 GATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A----L~GvDaVIh~ 170 (209)
-+||..|..|++.+..+|++|..+..+.. .. .+.+++++. +...+.+.++ ++.+|++||+
T Consensus 26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~--~p~~~~~i~--v~sa~em~~~~~~~~~~~Di~I~a 89 (185)
T PF04127_consen 26 RSSGKMGAALAEEAARRGAEVTLIHGPSS-LP--PPPGVKVIR--VESAEEMLEAVKELLPSADIIIMA 89 (185)
T ss_dssp S--SHHHHHHHHHHHHTT-EEEEEE-TTS-------TTEEEEE---SSHHHHHHHHHHHGGGGSEEEE-
T ss_pred CCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc--ccccceEEE--ecchhhhhhhhccccCcceeEEEe
Confidence 35899999999999999999999997642 11 144677766 4555544444 4678999998
No 376
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.34 E-value=0.0092 Score=53.16 Aligned_cols=66 Identities=11% Similarity=0.041 Sum_probs=50.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|.|.| .|.+|..+++.|.+.|++|.+..|++++.......++.. ..+++.+.++++.+|.||.+
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~----~~s~~~~~~~~~~~dvIi~~ 66 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTG----VANLRELSQRLSAPRVVWVM 66 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcc----cCCHHHHHhhcCCCCEEEEE
Confidence 4788998 599999999999999999999999988765443222221 24666677777888999877
No 377
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.34 E-value=0.016 Score=49.25 Aligned_cols=40 Identities=10% Similarity=0.086 Sum_probs=34.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~ 137 (209)
...++|+|+|. |.+|+++++.|.+.|++|.+..+++++..
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~ 65 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVA 65 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 45679999998 69999999999999999998888776543
No 378
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=96.33 E-value=0.032 Score=49.76 Aligned_cols=91 Identities=18% Similarity=0.099 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeC---CcchhhhcCCceEEEEccCCCHHHH-HHhhcCCcEEEEcC-h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD---KRNAMESFGTYVESMAGDASNKKFL-KTALRGVRSIICPS-E 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~---~~~a~~~~~~~vevv~GDl~D~~sL-~~AL~GvDaVIh~a-~ 172 (209)
+.++|||+|+ |.+|...++.+...|.+|.+++|+ +++......-+++.+ |..+.+.. .....++|.||-+. .
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v--~~~~~~~~~~~~~~~~d~vid~~g~ 248 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV--NSSKTPVAEVKLVGEFDLIIEATGV 248 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe--cCCccchhhhhhcCCCCEEEECcCC
Confidence 5779999986 999999998888899999999983 433322222234443 33322111 12346799999882 2
Q ss_pred h-H---HHHHHHhCCCCEEEEeccc
Q 028418 173 G-F---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 173 g-~---ll~AA~~aGVkriV~vSS~ 193 (209)
. . .++..+..| ++|.++..
T Consensus 249 ~~~~~~~~~~l~~~G--~~v~~G~~ 271 (355)
T cd08230 249 PPLAFEALPALAPNG--VVILFGVP 271 (355)
T ss_pred HHHHHHHHHHccCCc--EEEEEecC
Confidence 1 2 344444444 67776543
No 379
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=96.31 E-value=0.037 Score=47.29 Aligned_cols=95 Identities=13% Similarity=0.097 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHH---hh--cCCcEEEEcCh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT---AL--RGVRSIICPSE 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~---AL--~GvDaVIh~a~ 172 (209)
+..++||+|+++-+|..+++.+...|++|.+.+++.++.......+... ..|..+.+.... .. .++|.++++..
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g 244 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADY-VIDYRKEDFVREVRELTGKRGVDVVVEHVG 244 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCe-EEecCChHHHHHHHHHhCCCCCcEEEECCc
Confidence 4678999999999999999999999999999988775543221111221 124455443332 22 36899998732
Q ss_pred hH----HHHHHHhCCCCEEEEeccccc
Q 028418 173 GF----ISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 173 g~----ll~AA~~aGVkriV~vSS~~V 195 (209)
+. .++..+.. .++|.+++...
T Consensus 245 ~~~~~~~~~~l~~~--G~~v~~~~~~~ 269 (342)
T cd08266 245 AATWEKSLKSLARG--GRLVTCGATTG 269 (342)
T ss_pred HHHHHHHHHHhhcC--CEEEEEecCCC
Confidence 21 33443333 57888876543
No 380
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=96.30 E-value=0.029 Score=43.10 Aligned_cols=89 Identities=17% Similarity=0.187 Sum_probs=51.2
Q ss_pred eEEEEcCCCHHHHHHHHHHHH-CCCcEEEEEe-CCcchh--hhcCCceE-EEEccCCCHHHHHHhhcCCcEEEEc-ChhH
Q 028418 101 AVLVTDGDSDIGQMVILSLIV-KRTRIKALVK-DKRNAM--ESFGTYVE-SMAGDASNKKFLKTALRGVRSIICP-SEGF 174 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~-~G~~VraLvR-~~~~a~--~~~~~~ve-vv~GDl~D~~sL~~AL~GvDaVIh~-a~g~ 174 (209)
+|.|+|++|.+|+.+++.|.. .++++.+++. +.+... ....+.+. ++..++. ...+. ..++|.||.+ ....
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~DvV~~~~~~~~ 77 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELE-PEDFE--ELAVDIVFLALPHGV 77 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccc-cCChh--hcCCCEEEEcCCcHH
Confidence 478999999999999999988 5899999953 322211 11112221 2222332 22333 3589999987 2221
Q ss_pred ---HH---HHHHhCCCCEEEEeccc
Q 028418 175 ---IS---NAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 ---ll---~AA~~aGVkriV~vSS~ 193 (209)
++ ..+.+.| +.+|-+|+.
T Consensus 78 ~~~~~~~~~~~~~~g-~~viD~s~~ 101 (122)
T smart00859 78 SKEIAPLLPKAAEAG-VKVIDLSSA 101 (122)
T ss_pred HHHHHHHHHhhhcCC-CEEEECCcc
Confidence 21 1122444 567777764
No 381
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=96.28 E-value=0.011 Score=51.41 Aligned_cols=69 Identities=7% Similarity=-0.001 Sum_probs=45.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCC----CHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS----NKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~----D~~sL~~AL~GvDaVIh~ 170 (209)
|+|+|.|+ |.+|..++..|.+.|++|.+++|+++........++.+-.++.. -.....++ +.+|.||.+
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila 73 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILA 73 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEe
Confidence 47999997 99999999999999999999999776543222112221011111 01122333 789999887
No 382
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.25 E-value=0.055 Score=46.92 Aligned_cols=96 Identities=16% Similarity=0.156 Sum_probs=58.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCce-EEEEccCCCH-HHHHHhh-cCCcEEEEcChh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASNK-KFLKTAL-RGVRSIICPSEG 173 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~v-evv~GDl~D~-~sL~~AL-~GvDaVIh~a~g 173 (209)
.+.++|||+||+|-+|..+++.+...|.+|.++++++++.......++ .++..+-.+. ..+.... +++|.||.+..+
T Consensus 138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~ 217 (329)
T cd08250 138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGG 217 (329)
T ss_pred CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcH
Confidence 356799999999999999999999999999999987755432211122 2222221121 1222211 478999987322
Q ss_pred H----HHHHHHhCCCCEEEEecccc
Q 028418 174 F----ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 174 ~----ll~AA~~aGVkriV~vSS~~ 194 (209)
. .++..... .++|.+++..
T Consensus 218 ~~~~~~~~~l~~~--g~~v~~g~~~ 240 (329)
T cd08250 218 EMFDTCVDNLALK--GRLIVIGFIS 240 (329)
T ss_pred HHHHHHHHHhccC--CeEEEEeccc
Confidence 2 23333333 4788776554
No 383
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=96.25 E-value=0.019 Score=50.37 Aligned_cols=70 Identities=11% Similarity=0.109 Sum_probs=47.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhh---cCCceEEEEccCCC-HHHHHHhh-cCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGTYVESMAGDASN-KKFLKTAL-RGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~---~~~~vevv~GDl~D-~~sL~~AL-~GvDaVIh~ 170 (209)
++|||+||+|.+|..+++.+...|. +|.++++++++.... ++. -+++.-+-.+ .+.+.+.. +|+|.||.+
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa-~~vi~~~~~~~~~~i~~~~~~gvd~vid~ 231 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGF-DAAINYKTDNVAERLRELCPEGVDVYFDN 231 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCC-cEEEECCCCCHHHHHHHHCCCCceEEEEC
Confidence 7999999999999999998888998 799999887654322 332 1222211112 12233332 479999987
No 384
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.24 E-value=0.028 Score=52.05 Aligned_cols=82 Identities=12% Similarity=0.037 Sum_probs=55.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch----hhhcCCceEEEEccCCCHHHHHHhhc-CCcEEEEc-C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTALR-GVRSIICP-S 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a----~~~~~~~vevv~GDl~D~~sL~~AL~-GvDaVIh~-a 171 (209)
.+++|+|||++| +|..+++.|.++|++|.+..++.... ..+...++++..+... .. .+. ++|.||.. +
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~--~~---~~~~~~d~vV~s~g 77 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHP--LE---LLDEDFDLMVKNPG 77 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCC--HH---HhcCcCCEEEECCC
Confidence 356899999988 99999999999999999998765321 1122234666554422 22 133 48988876 2
Q ss_pred ---hhHHHHHHHhCCCC
Q 028418 172 ---EGFISNAGSLKGVQ 185 (209)
Q Consensus 172 ---~g~ll~AA~~aGVk 185 (209)
...++++|++.|++
T Consensus 78 i~~~~~~~~~a~~~~i~ 94 (447)
T PRK02472 78 IPYTNPMVEKALEKGIP 94 (447)
T ss_pred CCCCCHHHHHHHHCCCc
Confidence 23477777777764
No 385
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=96.23 E-value=0.038 Score=47.48 Aligned_cols=94 Identities=13% Similarity=0.097 Sum_probs=59.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH---HHHHHhh--cCCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~---~sL~~AL--~GvDaVIh~a 171 (209)
.+..+|||+|++|-+|..+++.+...|.+|.++++++++.......++..+ .+..++ ..+.+.. +++|.|+.+.
T Consensus 141 ~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vl~~~ 219 (324)
T cd08244 141 TPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVA-VDYTRPDWPDQVREALGGGGVTVVLDGV 219 (324)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEE-EecCCccHHHHHHHHcCCCCceEEEECC
Confidence 356789999999999999999999999999999987765432221222221 123333 2344444 3689999872
Q ss_pred hh-H---HHHHHHhCCCCEEEEeccc
Q 028418 172 EG-F---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 ~g-~---ll~AA~~aGVkriV~vSS~ 193 (209)
.+ . .+++.... .++|.++..
T Consensus 220 g~~~~~~~~~~l~~~--g~~v~~g~~ 243 (324)
T cd08244 220 GGAIGRAALALLAPG--GRFLTYGWA 243 (324)
T ss_pred ChHhHHHHHHHhccC--cEEEEEecC
Confidence 22 1 23333333 477777543
No 386
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.21 E-value=0.006 Score=53.77 Aligned_cols=68 Identities=13% Similarity=0.118 Sum_probs=48.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-------CCceEEEEccCC------------CHHHHHHh
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GTYVESMAGDAS------------NKKFLKTA 160 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-------~~~vevv~GDl~------------D~~sL~~A 160 (209)
++|.|.|+ |.+|..++..|..+|++|++..++++...... ..+++ .+.++ -..++.++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~i~~~~~~~~~ 78 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVA--RGKLTEAARQAALARLSYSLDLKAA 78 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHH--cCCCCHHHHHHHHhCeEEeCcHHHh
Confidence 47999998 99999999999999999999999887654321 00110 11111 12346788
Q ss_pred hcCCcEEEEc
Q 028418 161 LRGVRSIICP 170 (209)
Q Consensus 161 L~GvDaVIh~ 170 (209)
++++|.||.+
T Consensus 79 ~~~aD~Vi~a 88 (288)
T PRK09260 79 VADADLVIEA 88 (288)
T ss_pred hcCCCEEEEe
Confidence 9999999977
No 387
>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.
Probab=96.21 E-value=0.018 Score=52.03 Aligned_cols=65 Identities=12% Similarity=0.151 Sum_probs=52.3
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEE
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSII 168 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVI 168 (209)
+|+|.|+ |.+|+.++..+.+.|++|.+++.++......+. -+.+.+|+.|++.+.+..+.+|+|.
T Consensus 1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~a--d~~~~~~~~d~~~i~~~a~~~dvit 65 (352)
T TIGR01161 1 TVGILGG-GQLGRMLALAARPLGIKVHVLDPDANSPAVQVA--DHVVLAPFFDPAAIRELAESCDVIT 65 (352)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEECCCCCCChhHhC--ceeEeCCCCCHHHHHHHHhhCCEEE
Confidence 5889998 799999999999999999999876643322222 2456889999999999999998764
No 388
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.20 E-value=0.018 Score=49.70 Aligned_cols=64 Identities=9% Similarity=0.054 Sum_probs=46.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC---CcEEEEEeCCcchhhhcCC-ceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G---~~VraLvR~~~~a~~~~~~-~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.|+ |.+|+.+++.|.+.| ++|.+..|++++....... ++.+ . ....++++.+|.||.+
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~-----~--~~~~~~~~~advVil~ 69 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRA-----A--TDNQEAAQEADVVVLA 69 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCee-----c--CChHHHHhcCCEEEEE
Confidence 468999985 999999999999998 7899999988765433221 2322 1 1234557789999987
No 389
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=96.18 E-value=0.044 Score=49.34 Aligned_cols=93 Identities=11% Similarity=0.043 Sum_probs=57.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCC---CH-HHHHHhh-cCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDAS---NK-KFLKTAL-RGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~---D~-~sL~~AL-~GvDaVIh~ 170 (209)
.+.++|||+||+|-+|..+++.+...|.+|.++++++++..... ..+++.+. |.. +. +.+.+.. .|+|.||.+
T Consensus 157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi-~~~~~~~~~~~i~~~~~~gvD~v~d~ 235 (348)
T PLN03154 157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAF-NYKEEPDLDAALKRYFPEGIDIYFDN 235 (348)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEE-ECCCcccHHHHHHHHCCCCcEEEEEC
Confidence 35679999999999999999888889999999888776644221 12233222 222 21 2223222 379999987
Q ss_pred ChhH----HHHHHHhCCCCEEEEecc
Q 028418 171 SEGF----ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 171 a~g~----ll~AA~~aGVkriV~vSS 192 (209)
.-+. .++..+.. .++|.+..
T Consensus 236 vG~~~~~~~~~~l~~~--G~iv~~G~ 259 (348)
T PLN03154 236 VGGDMLDAALLNMKIH--GRIAVCGM 259 (348)
T ss_pred CCHHHHHHHHHHhccC--CEEEEECc
Confidence 3222 23333333 46776654
No 390
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=96.16 E-value=0.021 Score=52.84 Aligned_cols=103 Identities=14% Similarity=0.113 Sum_probs=70.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC-CceEEEEccCCCH---HHHHHhh-cCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNK---KFLKTAL-RGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~---~sL~~AL-~GvDaVIh~ 170 (209)
..+..+|+|++|+|-+|+.+.+-..-+|.+|+.++=.+++-..... .+.+ ...|..+. ..|.+|+ +|+|..|-+
T Consensus 148 pk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD-~~idyk~~d~~~~L~~a~P~GIDvyfeN 226 (340)
T COG2130 148 PKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD-AGIDYKAEDFAQALKEACPKGIDVYFEN 226 (340)
T ss_pred CCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc-eeeecCcccHHHHHHHHCCCCeEEEEEc
Confidence 3446799999999999988887777899999999988877543221 1111 12233332 2444444 689999977
Q ss_pred ChhHHHHHHHh--CCCCEEEEecccccccCC
Q 028418 171 SEGFISNAGSL--KGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 171 a~g~ll~AA~~--aGVkriV~vSS~~Vyg~~ 199 (209)
.-|.+++|+.. +---||+.+..++-|..+
T Consensus 227 VGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~ 257 (340)
T COG2130 227 VGGEVLDAVLPLLNLFARIPVCGAISQYNAP 257 (340)
T ss_pred CCchHHHHHHHhhccccceeeeeehhhcCCC
Confidence 55556666532 344688988888888776
No 391
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.14 E-value=0.015 Score=55.33 Aligned_cols=65 Identities=17% Similarity=0.058 Sum_probs=50.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++|+|+|. |.||+.++..|...|.+|.+..+++.++......+++++ .+.++++++|.||.+
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~--------~l~eal~~aDVVI~a 274 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVM--------TMEEAAELGDIFVTA 274 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEec--------CHHHHHhCCCEEEEC
Confidence 46789999996 999999999999999999999998876543322233322 246778899999987
No 392
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.13 E-value=0.083 Score=41.40 Aligned_cols=96 Identities=14% Similarity=0.144 Sum_probs=64.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchh-------------------------hhcCCc--eEEEEcc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM-------------------------ESFGTY--VESMAGD 150 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~-------------------------~~~~~~--vevv~GD 150 (209)
..+|+|.|+ |.+|+.+++.|...|. ++..++.+.-... ....+. ++.+.-+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 457888885 6699999999999998 5776664321100 001123 4556666
Q ss_pred CCCHHHHHHhhcCCcEEEEcC--h---hHHHHHHHhCCCCEEEEeccccccc
Q 028418 151 ASNKKFLKTALRGVRSIICPS--E---GFISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 151 l~D~~sL~~AL~GvDaVIh~a--~---g~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
+ +.+.+.+.++++|.||++. . -.+.+.|++.++ .+|+.+..+.+|
T Consensus 81 ~-~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~-p~i~~~~~g~~G 130 (135)
T PF00899_consen 81 I-DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGI-PFIDAGVNGFYG 130 (135)
T ss_dssp C-SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT--EEEEEEEETTEE
T ss_pred c-ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence 6 5567788889999999882 1 126778899987 588777666555
No 393
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=96.12 E-value=0.02 Score=49.59 Aligned_cols=94 Identities=13% Similarity=0.061 Sum_probs=58.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH---HHHHHhh-cCCcEEEEcCh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPSE 172 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~---~sL~~AL-~GvDaVIh~a~ 172 (209)
.+..+|||+||+|-+|..+++.+...|.+|.++++++++.......+++.+ .|..++ +.+.+.. .|+|.||.+..
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~~g 220 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAV-FNYKTVSLEEALKEAAPDGIDCYFDNVG 220 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence 346799999999999999999999999999999988766543222223222 133322 2233222 47899998732
Q ss_pred hH----HHHHHHhCCCCEEEEeccc
Q 028418 173 GF----ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 173 g~----ll~AA~~aGVkriV~vSS~ 193 (209)
+. .++..+.. .+||.++..
T Consensus 221 ~~~~~~~~~~l~~~--G~iv~~g~~ 243 (329)
T cd08294 221 GEFSSTVLSHMNDF--GRVAVCGSI 243 (329)
T ss_pred HHHHHHHHHhhccC--CEEEEEcch
Confidence 22 23333222 467776543
No 394
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.11 E-value=0.021 Score=51.21 Aligned_cols=71 Identities=14% Similarity=0.078 Sum_probs=47.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCC--ceEEEEc-----cCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--YVESMAG-----DASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~--~vevv~G-----Dl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.| .|.+|..++..|..+||+|++..|++++....... +.....+ .+.-.+++.++++.+|.||.+
T Consensus 4 ~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 4 GMRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVA 81 (328)
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEE
Confidence 46899996 59999999999999999999999987654322110 0000001 011122455678899999987
No 395
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.11 E-value=0.019 Score=47.99 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=46.0
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.....++|||.|+...+|..+++.|.++|.+|.+..|+. +.+.+.++.+|.||.+
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~---------------------~~l~~~l~~aDiVIsa 94 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT---------------------KNLKEHTKQADIVIVA 94 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc---------------------hhHHHHHhhCCEEEEc
Confidence 356788999999977889999999999999988888752 3466788888998887
No 396
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.10 E-value=0.0074 Score=44.12 Aligned_cols=63 Identities=14% Similarity=0.164 Sum_probs=45.9
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCC---CcEEEE-EeCCcchhhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKR---TRIKAL-VKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G---~~VraL-vR~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+|.|. |+|.+|+.+++.|++.| ++|... .|++++..+... .++.+... +..++++.+|.||.+
T Consensus 1 kI~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~advvila 68 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD------DNEEAAQEADVVILA 68 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE------EHHHHHHHTSEEEE-
T ss_pred CEEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC------ChHHhhccCCEEEEE
Confidence 56777 89999999999999999 999955 899887654321 11333321 246778899999988
No 397
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=96.10 E-value=0.0072 Score=47.23 Aligned_cols=81 Identities=15% Similarity=0.166 Sum_probs=49.3
Q ss_pred CeEEEEcCC---CHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C---h
Q 028418 100 DAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S---E 172 (209)
Q Consensus 100 ~~ILVTGAT---GfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a---~ 172 (209)
++|+|.||+ +..|..+++.|+++|++|..+. +... ...+ ... . .++.+.-..+|.++.+ . .
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vn--p~~~-~i~G--~~~-y------~sl~e~p~~iDlavv~~~~~~~ 68 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVN--PKGG-EILG--IKC-Y------PSLAEIPEPIDLAVVCVPPDKV 68 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEES--TTCS-EETT--EE--B------SSGGGCSST-SEEEE-S-HHHH
T ss_pred CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEEC--CCce-EECc--EEe-e------ccccCCCCCCCEEEEEcCHHHH
Confidence 479999998 7799999999999999998883 3321 1111 111 1 1233323678888876 2 2
Q ss_pred hHHHHHHHhCCCCEEEEecc
Q 028418 173 GFISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 g~ll~AA~~aGVkriV~vSS 192 (209)
..+++.|.+.|++.+++.++
T Consensus 69 ~~~v~~~~~~g~~~v~~~~g 88 (116)
T PF13380_consen 69 PEIVDEAAALGVKAVWLQPG 88 (116)
T ss_dssp HHHHHHHHHHT-SEEEE-TT
T ss_pred HHHHHHHHHcCCCEEEEEcc
Confidence 23788888889999999987
No 398
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.09 E-value=0.012 Score=51.70 Aligned_cols=63 Identities=13% Similarity=0.036 Sum_probs=46.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.|.| .|.+|+.+++.|.+.|++|.+..|++++.......++.+ .+++.++++.+|.||.+
T Consensus 3 ~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~-------~~~~~e~~~~~d~vi~~ 65 (296)
T PRK11559 3 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAET-------ASTAKAVAEQCDVIITM 65 (296)
T ss_pred ceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee-------cCCHHHHHhcCCEEEEe
Confidence 5799998 699999999999999999999999887654332222221 12345667889998877
No 399
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.05 E-value=0.025 Score=48.16 Aligned_cols=69 Identities=7% Similarity=0.130 Sum_probs=50.2
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+..+++|||.|| |.+|.+.++.|++.|++|+++.++..+. ..... ..+.+..-++. ...+.++|.||.+
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~-----~~~l~~adlViaa 77 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFE-----PSDIVDAFLVIAA 77 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCC-----hhhcCCceEEEEc
Confidence 456789999998 9999999999999999999998765432 22222 23566554443 2347889999987
No 400
>PLN02688 pyrroline-5-carboxylate reductase
Probab=96.04 E-value=0.014 Score=50.36 Aligned_cols=63 Identities=11% Similarity=0.034 Sum_probs=45.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC----cEEEE-EeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT----RIKAL-VKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~----~VraL-vR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|.+.| .|.+|+.+++.|+++|+ +|.+. .|++++.......++.+. . +..++++.+|.||.+
T Consensus 1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~----~---~~~e~~~~aDvVil~ 68 (266)
T PLN02688 1 FRVGFIG-AGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTA----A---SNTEVVKSSDVIILA 68 (266)
T ss_pred CeEEEEC-CcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEe----C---ChHHHHhcCCEEEEE
Confidence 5788997 99999999999999998 88888 777766543322234331 1 234567788999877
No 401
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=96.02 E-value=0.043 Score=51.46 Aligned_cols=88 Identities=17% Similarity=0.074 Sum_probs=53.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHH-HCCCc---EEEEEeCCcch-hhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-hh
Q 028418 100 DAVLVTDGDSDIGQMVILSLI-VKRTR---IKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-EG 173 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll-~~G~~---VraLvR~~~~a-~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~g 173 (209)
++|.|.||||.+|+.+++.|. ++.++ ++++.-..+.- ...+. +.+...-++.+. +.+.++|.||.++ ..
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~-~~~~~v~~~~~~----~~~~~vDivffa~g~~ 75 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFG-GTTGTLQDAFDI----DALKALDIIITCQGGD 75 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCC-CCcceEEcCccc----ccccCCCEEEEcCCHH
Confidence 368999999999999999998 66665 44444221111 11121 122233344332 3568999999983 22
Q ss_pred ---HHHHHHHhCCCC-EEEEecc
Q 028418 174 ---FISNAGSLKGVQ-HVILLSQ 192 (209)
Q Consensus 174 ---~ll~AA~~aGVk-riV~vSS 192 (209)
.+...+.++|.. .+|=.||
T Consensus 76 ~s~~~~p~~~~aG~~~~VIDnSS 98 (366)
T TIGR01745 76 YTNEIYPKLRESGWQGYWIDAAS 98 (366)
T ss_pred HHHHHHHHHHhCCCCeEEEECCh
Confidence 267778888975 4444444
No 402
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.01 E-value=0.085 Score=48.71 Aligned_cols=96 Identities=13% Similarity=0.136 Sum_probs=64.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCC-------------------cchh------hhcCCce--EEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAM------ESFGTYV--ESMA 148 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~-------------------~~a~------~~~~~~v--evv~ 148 (209)
....+|+|.|+ |.+|+.++..|...|. +++.++++. .++. ....+.+ +.+.
T Consensus 133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 211 (376)
T PRK08762 133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ 211 (376)
T ss_pred HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 44668999976 7799999999999997 677777761 2221 1112334 3444
Q ss_pred ccCCCHHHHHHhhcCCcEEEEcCh-----hHHHHHHHhCCCCEEEEeccccc
Q 028418 149 GDASNKKFLKTALRGVRSIICPSE-----GFISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 149 GDl~D~~sL~~AL~GvDaVIh~a~-----g~ll~AA~~aGVkriV~vSS~~V 195 (209)
..++ .+.+.+.++++|.||.+.+ -.+-++|++.++. +|+.+..+.
T Consensus 212 ~~~~-~~~~~~~~~~~D~Vv~~~d~~~~r~~ln~~~~~~~ip-~i~~~~~g~ 261 (376)
T PRK08762 212 ERVT-SDNVEALLQDVDVVVDGADNFPTRYLLNDACVKLGKP-LVYGAVFRF 261 (376)
T ss_pred ccCC-hHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEeccC
Confidence 4443 4567778899999998832 1266778888865 677665443
No 403
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=96.01 E-value=0.052 Score=49.10 Aligned_cols=85 Identities=12% Similarity=0.096 Sum_probs=57.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhhhcCCceEEEEccCCCHHHHHHhhcC--CcEEEEc-Chh-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRG--VRSIICP-SEG- 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~~~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~-a~g- 173 (209)
..+|+|-|-||++|+.+.+.|+..|.++++-+ +|.+ ....++ +.. -.++.++-+. +|.++.+ ...
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~v~~V-~p~~~~~~v~G--~~~-------y~sv~dlp~~~~~Dlavi~vpa~~ 75 (286)
T TIGR01019 6 DTKVIVQGITGSQGSFHTEQMLAYGTNIVGGV-TPGKGGTTVLG--LPV-------FDSVKEAVEETGANASVIFVPAPF 75 (286)
T ss_pred CCcEEEecCCcHHHHHHHHHHHhCCCCEEEEE-CCCCCcceecC--eec-------cCCHHHHhhccCCCEEEEecCHHH
Confidence 45899999999999999999999999977766 4442 122222 111 1234444443 7888776 222
Q ss_pred --HHHHHHHhCCCCEEEEeccc
Q 028418 174 --FISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 174 --~ll~AA~~aGVkriV~vSS~ 193 (209)
..++.|.+.||+.+|.+|+.
T Consensus 76 v~~~l~e~~~~Gvk~avIis~G 97 (286)
T TIGR01019 76 AADAIFEAIDAGIELIVCITEG 97 (286)
T ss_pred HHHHHHHHHHCCCCEEEEECCC
Confidence 25666778999999888875
No 404
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.00 E-value=0.11 Score=43.93 Aligned_cols=101 Identities=10% Similarity=0.114 Sum_probs=67.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcc---------------------h------hhhcCCc--eE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN---------------------A------MESFGTY--VE 145 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~---------------------a------~~~~~~~--ve 145 (209)
...+.+|+|.|+.| +|+.+++.|...|.. ++.++.+.-. + .....+. ++
T Consensus 16 ~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~ 94 (198)
T cd01485 16 KLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLS 94 (198)
T ss_pred HHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEE
Confidence 44567999999998 999999999999965 6666643210 0 0111233 34
Q ss_pred EEEccCCC-HHHHHHhhcCCcEEEEcC--hh---HHHHHHHhCCCCEEEEecccccccC
Q 028418 146 SMAGDASN-KKFLKTALRGVRSIICPS--EG---FISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 146 vv~GDl~D-~~sL~~AL~GvDaVIh~a--~g---~ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.+..++.+ .+...+.+..+|.||.+. .. .+-+.|++.++ .+|+.++.+.+|.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~dvVi~~~d~~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~ 152 (198)
T cd01485 95 IVEEDSLSNDSNIEEYLQKFTLVIATEENYERTAKVNDVCRKHHI-PFISCATYGLIGY 152 (198)
T ss_pred EEecccccchhhHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCC-CEEEEEeecCEEE
Confidence 45555542 445567788999999882 11 26678899997 4777777766653
No 405
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.99 E-value=0.031 Score=52.19 Aligned_cols=90 Identities=12% Similarity=0.085 Sum_probs=54.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCc---chhhhcCCceE-E--EEccCCCHHHHHHhhcCCcEEEEc-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR---NAMESFGTYVE-S--MAGDASNKKFLKTALRGVRSIICP- 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~---~a~~~~~~~ve-v--v~GDl~D~~sL~~AL~GvDaVIh~- 170 (209)
+.+|.|.||+|++|..|++.|..+ ..++...+.+.. +.....+ +.. . ......|++.+ ..++||+||.+
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p-~l~g~~~l~~~~~~~~~~--~~~~~DvvFlal 78 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHP-NLRGLVDLPFQTIDPEKI--ELDECDVVFLAL 78 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCc-ccccccccccccCChhhh--hcccCCEEEEec
Confidence 678999999999999999988765 356555553221 1112221 111 1 22223344443 56789999988
Q ss_pred ChhH---HHHHHHhCCCCEEEEecc
Q 028418 171 SEGF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 171 a~g~---ll~AA~~aGVkriV~vSS 192 (209)
..|. ++....+.|++ ||=+|.
T Consensus 79 Phg~s~~~v~~l~~~g~~-VIDLSa 102 (349)
T COG0002 79 PHGVSAELVPELLEAGCK-VIDLSA 102 (349)
T ss_pred CchhHHHHHHHHHhCCCe-EEECCc
Confidence 3443 55555666766 777775
No 406
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.99 E-value=0.027 Score=51.57 Aligned_cols=71 Identities=6% Similarity=-0.077 Sum_probs=48.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-----------CCce--EEEEccCCCHHHHHHhhcCCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----------GTYV--ESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-----------~~~v--evv~GDl~D~~sL~~AL~GvD 165 (209)
-++|.|.|+ |-+|+.++..++..|++|++.+++++...... ..+. ......+.-..++.+++++||
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD 85 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD 85 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence 468999986 99999999999999999999999876432110 0000 001111222235778999999
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.||-+
T Consensus 86 lViEa 90 (321)
T PRK07066 86 FIQES 90 (321)
T ss_pred EEEEC
Confidence 99987
No 407
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=95.99 E-value=0.0093 Score=52.45 Aligned_cols=62 Identities=10% Similarity=-0.016 Sum_probs=46.0
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+|.|.| .|.+|+.+++.|++.|++|.+..|++++.......+.. ...+..++++.+|.||.+
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------~~~~~~~~~~~aDivi~~ 62 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAV-------TAETARQVTEQADVIFTM 62 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCc-------ccCCHHHHHhcCCEEEEe
Confidence 377886 69999999999999999999999998766543322221 122456778889998877
No 408
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.98 E-value=0.033 Score=51.92 Aligned_cols=94 Identities=10% Similarity=0.139 Sum_probs=66.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHhhcCCcEEEEc----C-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGVRSIICP----S- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~AL~GvDaVIh~----a- 171 (209)
|.+.+.|+|+.| +|..-|+...+-|++|.++.++.++.++.+ .-+.|++..-..|++.+.++..-.|.++|+ +
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~ 259 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAE 259 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccc
Confidence 677999999999 999888888899999999999874443332 245777766666999888887755555554 1
Q ss_pred --hhHHHHHHHhCCCCEEEEecccc
Q 028418 172 --EGFISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 172 --~g~ll~AA~~aGVkriV~vSS~~ 194 (209)
...++..++..| ++|+++-..
T Consensus 260 ~~~~~~~~~lk~~G--t~V~vg~p~ 282 (360)
T KOG0023|consen 260 HALEPLLGLLKVNG--TLVLVGLPE 282 (360)
T ss_pred cchHHHHHHhhcCC--EEEEEeCcC
Confidence 122455555444 677776554
No 409
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=95.98 E-value=0.011 Score=51.94 Aligned_cols=63 Identities=10% Similarity=0.094 Sum_probs=45.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCce-EEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~v-evv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.|.| .|.+|..++..|..+|++|.+..|+++........++ ... ..+ .++++++|.||.+
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~---~~~----~~~~~~aDlVila 64 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEA---STD----LSLLKDCDLVILA 64 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccc---cCC----HhHhcCCCEEEEc
Confidence 4789998 7999999999999999999999998765543322211 110 111 2357889999887
No 410
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.96 E-value=0.028 Score=42.62 Aligned_cols=84 Identities=11% Similarity=0.213 Sum_probs=56.6
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-h--
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-E-- 172 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~-- 172 (209)
+..+++|||.|+ |.+|.+=++.|++.|.+|+++....+..+ ..+++..-++ .+.+++++.||.+. .
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~~~~~----~~i~~~~~~~------~~~l~~~~lV~~at~d~~ 72 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEIEFSE----GLIQLIRREF------EEDLDGADLVFAATDDPE 72 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSEHHHH----TSCEEEESS-------GGGCTTESEEEE-SS-HH
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCchhhhh----hHHHHHhhhH------HHHHhhheEEEecCCCHH
Confidence 345779999998 99999999999999999999987651111 3456655554 34489999999773 1
Q ss_pred --hHHHHHHHhCCCCEEEEecc
Q 028418 173 --GFISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 --g~ll~AA~~aGVkriV~vSS 192 (209)
..+.+.|++.++ +|.++.
T Consensus 73 ~n~~i~~~a~~~~i--~vn~~D 92 (103)
T PF13241_consen 73 LNEAIYADARARGI--LVNVVD 92 (103)
T ss_dssp HHHHHHHHHHHTTS--EEEETT
T ss_pred HHHHHHHHHhhCCE--EEEECC
Confidence 126677777664 555544
No 411
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=95.95 E-value=0.023 Score=50.60 Aligned_cols=66 Identities=9% Similarity=-0.020 Sum_probs=45.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.|.| .|.+|+.+++.|+++|++|.+..|++++.......++.+ ..+++.+.+.+.++|.||.+
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~----~~~~~e~~~~~~~~dvvi~~ 66 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATG----ADSLEELVAKLPAPRVVWLM 66 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCee----cCCHHHHHhhcCCCCEEEEE
Confidence 3688886 899999999999999999999999887654432223322 23444444444456776655
No 412
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=95.94 E-value=0.0088 Score=54.54 Aligned_cols=72 Identities=19% Similarity=0.214 Sum_probs=55.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCc-----EEEEEeCCcchhhh------cC----CceEEEEccCCCHHHHHHhhc-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTR-----IKALVKDKRNAMES------FG----TYVESMAGDASNKKFLKTALR- 162 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~-----VraLvR~~~~a~~~------~~----~~vevv~GDl~D~~sL~~AL~- 162 (209)
++.+||||++..+|-.|+.+|++...+ +.+..|+-++++.. +. ..++++..|+++..++.+|-+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 567999999999999999999986543 44455888776521 22 347899999999999988864
Q ss_pred ------CCcEEEEc
Q 028418 163 ------GVRSIICP 170 (209)
Q Consensus 163 ------GvDaVIh~ 170 (209)
-.|.|+..
T Consensus 83 i~~rf~~ld~iylN 96 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLN 96 (341)
T ss_pred HHHHhhhccEEEEc
Confidence 45778765
No 413
>PRK07877 hypothetical protein; Provisional
Probab=95.93 E-value=0.034 Score=56.19 Aligned_cols=95 Identities=15% Similarity=0.248 Sum_probs=66.4
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcc------------------hh------hhcCCc--eE
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN------------------AM------ESFGTY--VE 145 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~------------------a~------~~~~~~--ve 145 (209)
.+...+.+|+|.|+ | +|++++..|...|. +++.++.|.-. +. ....++ |+
T Consensus 102 Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~ 179 (722)
T PRK07877 102 QERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVE 179 (722)
T ss_pred HHHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEE
Confidence 34556779999999 8 99999999999995 77777643311 00 011233 55
Q ss_pred EEEccCCCHHHHHHhhcCCcEEEEcChh-----HHHHHHHhCCCCEEEEecc
Q 028418 146 SMAGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 146 vv~GDl~D~~sL~~AL~GvDaVIh~a~g-----~ll~AA~~aGVkriV~vSS 192 (209)
.+...++ ++.+.+.+.++|.||.+.+. .+-++|.+.++. +|+-++
T Consensus 180 ~~~~~i~-~~n~~~~l~~~DlVvD~~D~~~~R~~ln~~a~~~~iP-~i~~~~ 229 (722)
T PRK07877 180 VFTDGLT-EDNVDAFLDGLDVVVEECDSLDVKVLLREAARARRIP-VLMATS 229 (722)
T ss_pred EEeccCC-HHHHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEcC
Confidence 5666665 77899999999999988322 266788999876 666554
No 414
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.92 E-value=0.031 Score=51.93 Aligned_cols=92 Identities=14% Similarity=0.252 Sum_probs=52.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCc---EEEEEeCCcchhh--hcCCceEEEEccCCCHHHHHHhhcCCcEEEEcChh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTR---IKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~---VraLvR~~~~a~~--~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a~g 173 (209)
+.+|.|.||||.+|+.+++.|-++... +.++....+.-.. .|......+.-++.|.. .++++|.||.++.+
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~~v~~~~~~~~----~~~~~Divf~~ag~ 76 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSIGVPEDAADEF----VFSDVDIVFFAAGG 76 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccccCcccccccc----ccccCCEEEEeCch
Confidence 468999999999999999988887644 3344422221111 11111111222223322 34499999988422
Q ss_pred ----HHHHHHHhCCCCEEEEeccccccc
Q 028418 174 ----FISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 174 ----~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
.+...+.++| .+-++..++++
T Consensus 77 ~~s~~~~p~~~~~G---~~VIdnsSa~R 101 (334)
T COG0136 77 SVSKEVEPKAAEAG---CVVIDNSSAFR 101 (334)
T ss_pred HHHHHHHHHHHHcC---CEEEeCCcccc
Confidence 2666777888 44455555544
No 415
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=95.90 E-value=0.051 Score=49.33 Aligned_cols=66 Identities=12% Similarity=0.241 Sum_probs=47.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchh----hh-----cCCceEEEEccCCCHHHHHHhhcCCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----ES-----FGTYVESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~----~~-----~~~~vevv~GDl~D~~sL~~AL~GvD 165 (209)
...++|.|+|| |.||+.++..|..++. +++.++++.+.+. .+ +...+.+..+ + .++++++|
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~----~~~~~~ad 75 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---D----YSDCKDAD 75 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC---C----HHHhCCCC
Confidence 44569999998 9999999999999887 7999988776542 11 1122333322 2 35699999
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.||.+
T Consensus 76 ivIit 80 (315)
T PRK00066 76 LVVIT 80 (315)
T ss_pred EEEEe
Confidence 99987
No 416
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.90 E-value=0.058 Score=46.16 Aligned_cols=83 Identities=16% Similarity=0.182 Sum_probs=60.1
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-hh-cCCceEEEEccCCCHHHHHHhhcCCcEEEEc-Ch
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ES-FGTYVESMAGDASNKKFLKTALRGVRSIICP-SE 172 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-~~-~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~ 172 (209)
+...++|||.| .|.+|..-++.|++.|.+|+++..+..+.. .+ ...+++++.+++... -+++++.||.+ ..
T Consensus 6 ~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~-----dl~~~~lVi~at~d 79 (205)
T TIGR01470 6 NLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDAD-----ILEGAFLVIAATDD 79 (205)
T ss_pred EcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHH-----HhCCcEEEEECCCC
Confidence 45567999998 488999999999999999999986654322 11 123689999998743 36899999887 22
Q ss_pred h----HHHHHHHhCCC
Q 028418 173 G----FISNAGSLKGV 184 (209)
Q Consensus 173 g----~ll~AA~~aGV 184 (209)
. .+...|++.|+
T Consensus 80 ~~ln~~i~~~a~~~~i 95 (205)
T TIGR01470 80 EELNRRVAHAARARGV 95 (205)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 1 26667776654
No 417
>PRK06849 hypothetical protein; Provisional
Probab=95.87 E-value=0.04 Score=50.42 Aligned_cols=38 Identities=11% Similarity=-0.007 Sum_probs=34.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~ 135 (209)
.+++|||||+...+|.++++.|.++|++|.++..++..
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~ 40 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP 40 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 46899999999999999999999999999999877643
No 418
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.86 E-value=0.013 Score=52.19 Aligned_cols=39 Identities=13% Similarity=0.038 Sum_probs=34.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~ 137 (209)
+..+|.|.|+ |.+|+.++..|+..|++|++..++++...
T Consensus 4 ~~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~ 42 (286)
T PRK07819 4 AIQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELAT 42 (286)
T ss_pred CccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence 3458999987 99999999999999999999999987643
No 419
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.84 E-value=0.025 Score=50.42 Aligned_cols=51 Identities=10% Similarity=0.126 Sum_probs=40.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.| +|.+|+.++..|..+||+|++..|++. .++.++++++|.||.+
T Consensus 4 ~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~~--------------------~~~~~~~~~advvi~~ 54 (308)
T PRK14619 4 PKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRSG--------------------LSLAAVLADADVIVSA 54 (308)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCCC--------------------CCHHHHHhcCCEEEEE
Confidence 46899995 699999999999999999999998753 1244556677777765
No 420
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=95.84 E-value=0.09 Score=46.22 Aligned_cols=92 Identities=13% Similarity=0.096 Sum_probs=58.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchhhhcCCceEEEEccCCC--HHHHHHhhc--CCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTALR--GVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~~~~~~~vevv~GDl~D--~~sL~~AL~--GvDaVIh~a 171 (209)
.+.++|||+|+ |.+|..+++.+...|.+ |.++.+++++.......+++.+ .|..+ .+.+.+... ++|.||.+.
T Consensus 162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~~~~~~~~d~vid~~ 239 (339)
T cd08239 162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFV-INSGQDDVQEIRELTSGAGADVAIECS 239 (339)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE-EcCCcchHHHHHHHhCCCCCCEEEECC
Confidence 45789999986 99999999999899999 9988887765432211123222 12222 445555554 699999872
Q ss_pred --hhH---HHHHHHhCCCCEEEEecc
Q 028418 172 --EGF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 --~g~---ll~AA~~aGVkriV~vSS 192 (209)
... .++..+..| ++|.++.
T Consensus 240 g~~~~~~~~~~~l~~~G--~~v~~g~ 263 (339)
T cd08239 240 GNTAARRLALEAVRPWG--RLVLVGE 263 (339)
T ss_pred CCHHHHHHHHHHhhcCC--EEEEEcC
Confidence 211 344444444 7777664
No 421
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=95.82 E-value=0.031 Score=47.21 Aligned_cols=92 Identities=15% Similarity=0.115 Sum_probs=57.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhh--cCCcEEEEcCh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL--RGVRSIICPSE 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL--~GvDaVIh~a~ 172 (209)
+.++|||+||+|.+|..+++.+...|.+|.++++++++.......++..+ .|..+++ .+.+.. +++|.|+.+..
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~~ 222 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAV-FNYRAEDLADRILAATAGQGVDVIIEVLA 222 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCcCHHHHHHHHcCCCceEEEEECCc
Confidence 46799999999999999999999999999999987765432211122211 2333333 333333 37899998732
Q ss_pred hH----HHHHHHhCCCCEEEEecc
Q 028418 173 GF----ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 g~----ll~AA~~aGVkriV~vSS 192 (209)
+. .++... .-.++|.+++
T Consensus 223 ~~~~~~~~~~l~--~~g~~v~~~~ 244 (325)
T cd08253 223 NVNLAKDLDVLA--PGGRIVVYGS 244 (325)
T ss_pred hHHHHHHHHhhC--CCCEEEEEee
Confidence 22 122222 2256777765
No 422
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.82 E-value=0.12 Score=40.64 Aligned_cols=91 Identities=21% Similarity=0.191 Sum_probs=59.3
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCc-------------------chh------hhcCCce--EEEEccCC
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------NAM------ESFGTYV--ESMAGDAS 152 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~-------------------~a~------~~~~~~v--evv~GDl~ 152 (209)
+|+|.|+ |.+|+.+++.|...|. ++..++.+.- ++. ....+.+ +.+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 5899997 8999999999999998 5777764420 000 0112333 44555554
Q ss_pred CHHHHHHhhcCCcEEEEcC-----hhHHHHHHHhCCCCEEEEecccc
Q 028418 153 NKKFLKTALRGVRSIICPS-----EGFISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 153 D~~sL~~AL~GvDaVIh~a-----~g~ll~AA~~aGVkriV~vSS~~ 194 (209)
+. ...+.+.+.|.||.+. .-.+.++|++.++. +|...+.+
T Consensus 80 ~~-~~~~~~~~~diVi~~~d~~~~~~~l~~~~~~~~i~-~i~~~~~g 124 (143)
T cd01483 80 ED-NLDDFLDGVDLVIDAIDNIAVRRALNRACKELGIP-VIDAGGLG 124 (143)
T ss_pred hh-hHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEcCCC
Confidence 43 3467789999999882 12277889998855 55555544
No 423
>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.73 E-value=0.043 Score=50.75 Aligned_cols=84 Identities=8% Similarity=0.061 Sum_probs=52.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEE---EEE---eCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcCh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIK---ALV---KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~Vr---aLv---R~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a~ 172 (209)
..+|.| ||||-+|+.+++.|-+++++|. .+. |+..+.. .|. +-++..-++++. .++++|.+|. +.
T Consensus 3 ~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~gk~i-~f~-g~~~~V~~l~~~-----~f~~vDia~f-ag 73 (322)
T PRK06901 3 TLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGEEQGI-RFN-NKAVEQIAPEEV-----EWADFNYVFF-AG 73 (322)
T ss_pred cceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccCCCEE-EEC-CEEEEEEECCcc-----CcccCCEEEE-cC
Confidence 457999 9999999999999999998765 333 3333221 222 224444444432 4689999988 43
Q ss_pred hH----HHHHHHhCCCCEEEEecc
Q 028418 173 GF----ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 g~----ll~AA~~aGVkriV~vSS 192 (209)
+. +...+.++|.. +|=.||
T Consensus 74 ~~~s~~~ap~a~~aG~~-VIDnSs 96 (322)
T PRK06901 74 KMAQAEHLAQAAEAGCI-VIDLYG 96 (322)
T ss_pred HHHHHHHHHHHHHCCCE-EEECCh
Confidence 22 55566777743 443444
No 424
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=95.72 E-value=0.086 Score=47.20 Aligned_cols=93 Identities=17% Similarity=0.125 Sum_probs=57.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchhhhcCCceEEEEccCCCH---HHHHHhhc--CCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~~~~~~~vevv~GDl~D~---~sL~~AL~--GvDaVIh~ 170 (209)
.+.++|||+|+ |-+|..+++.+...|.+ |.++.+++++.......+++.+ .|..++ +.+.++.. |+|.||-+
T Consensus 175 ~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~-i~~~~~~~~~~i~~~~~~~g~d~vid~ 252 (358)
T TIGR03451 175 KRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHT-VNSSGTDPVEAIRALTGGFGADVVIDA 252 (358)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceE-EcCCCcCHHHHHHHHhCCCCCCEEEEC
Confidence 45779999985 99999999988899986 8888887765432211223221 133332 33444443 68999987
Q ss_pred C--hhH---HHHHHHhCCCCEEEEeccc
Q 028418 171 S--EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 171 a--~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
. ..+ .+++++.. .++|.+...
T Consensus 253 ~g~~~~~~~~~~~~~~~--G~iv~~G~~ 278 (358)
T TIGR03451 253 VGRPETYKQAFYARDLA--GTVVLVGVP 278 (358)
T ss_pred CCCHHHHHHHHHHhccC--CEEEEECCC
Confidence 2 222 23333333 578877653
No 425
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=95.71 E-value=0.029 Score=46.32 Aligned_cols=95 Identities=11% Similarity=0.054 Sum_probs=58.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh----hcCCcEEEEcCh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA----LRGVRSIICPSE 172 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A----L~GvDaVIh~a~ 172 (209)
.+..+|||+|+++ +|+.+++.+...|.+|.++++++++.......+... ..|..+.+..... -.++|.||.+..
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~~ 210 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADH-VIDYKEEDLEEELRLTGGGGADVVIDAVG 210 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCce-eccCCcCCHHHHHHHhcCCCCCEEEECCC
Confidence 4567999999999 999999999999999999998775543221111211 1233333332221 257899998732
Q ss_pred h-H----HHHHHHhCCCCEEEEeccccc
Q 028418 173 G-F----ISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 173 g-~----ll~AA~~aGVkriV~vSS~~V 195 (209)
+ . .++..+.. .++|.++....
T Consensus 211 ~~~~~~~~~~~l~~~--G~~v~~~~~~~ 236 (271)
T cd05188 211 GPETLAQALRLLRPG--GRIVVVGGTSG 236 (271)
T ss_pred CHHHHHHHHHhcccC--CEEEEEccCCC
Confidence 2 2 33333333 46887776543
No 426
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=95.70 E-value=0.02 Score=50.97 Aligned_cols=63 Identities=10% Similarity=0.066 Sum_probs=46.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.|.| .|.+|..+++.|+++|++|.+..|++++.......++. ...+..++++++|.||.+
T Consensus 2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~-------~~~s~~~~~~~aDvVi~~ 64 (296)
T PRK15461 2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGAT-------PAASPAQAAAGAEFVITM 64 (296)
T ss_pred CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCc-------ccCCHHHHHhcCCEEEEe
Confidence 4788885 89999999999999999999999998776543222221 122345677888888876
No 427
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=95.70 E-value=0.026 Score=46.64 Aligned_cols=66 Identities=17% Similarity=0.028 Sum_probs=47.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
....++|.|.| .|.||+.|++.|..-|.+|.+..|............++ ..+++++++.+|.|+.+
T Consensus 33 ~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~--------~~~l~ell~~aDiv~~~ 98 (178)
T PF02826_consen 33 ELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE--------YVSLDELLAQADIVSLH 98 (178)
T ss_dssp -STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE--------ESSHHHHHHH-SEEEE-
T ss_pred ccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcccccce--------eeehhhhcchhhhhhhh
Confidence 45678999997 59999999999999999999999988764311111122 23577889999998865
No 428
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=95.68 E-value=0.14 Score=44.28 Aligned_cols=91 Identities=13% Similarity=0.101 Sum_probs=57.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cCCceEEEEccCCCHH---HHHHhh-cCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKK---FLKTAL-RGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~---sL~~AL-~GvDaVIh~ 170 (209)
+..+|||+|++|.+|..+++.+...|.+|.++++++++.... ++. .+++. ..+.+ .+.+.. .++|.+|.+
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~-~~~~~--~~~~~~~~~v~~~~~~~~d~vi~~ 221 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGF-DAAIN--YKTPDLAEALKEAAPDGIDVYFDN 221 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCC-ceEEe--cCChhHHHHHHHhccCCceEEEEc
Confidence 457999999999999999999999999999999877654322 221 12222 22322 222222 478999987
Q ss_pred ChhH----HHHHHHhCCCCEEEEeccc
Q 028418 171 SEGF----ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 171 a~g~----ll~AA~~aGVkriV~vSS~ 193 (209)
..+. .++.++.. .++|.++..
T Consensus 222 ~g~~~~~~~~~~l~~~--G~~v~~g~~ 246 (329)
T cd05288 222 VGGEILDAALTLLNKG--GRIALCGAI 246 (329)
T ss_pred chHHHHHHHHHhcCCC--ceEEEEeec
Confidence 3222 23333333 467777654
No 429
>PLN02740 Alcohol dehydrogenase-like
Probab=95.66 E-value=0.11 Score=47.11 Aligned_cols=95 Identities=12% Similarity=0.073 Sum_probs=57.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCH-----HHHHHhhc-CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK-----KFLKTALR-GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~-----~sL~~AL~-GvDaVIh 169 (209)
.+.++|||.|+ |-||...++.+...|. +|.++++++++......-+++.+. |..++ +.+.+... ++|.||-
T Consensus 197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i-~~~~~~~~~~~~v~~~~~~g~dvvid 274 (381)
T PLN02740 197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFI-NPKDSDKPVHERIREMTGGGVDYSFE 274 (381)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEE-ecccccchHHHHHHHHhCCCCCEEEE
Confidence 34679999996 9999999998889998 599998887665432222232221 33321 23444333 6999998
Q ss_pred c-C-hhHHHHHHH--hCCCCEEEEeccc
Q 028418 170 P-S-EGFISNAGS--LKGVQHVILLSQR 193 (209)
Q Consensus 170 ~-a-~g~ll~AA~--~aGVkriV~vSS~ 193 (209)
+ . ..++-++.. ..|-.++|.++..
T Consensus 275 ~~G~~~~~~~a~~~~~~g~G~~v~~G~~ 302 (381)
T PLN02740 275 CAGNVEVLREAFLSTHDGWGLTVLLGIH 302 (381)
T ss_pred CCCChHHHHHHHHhhhcCCCEEEEEccC
Confidence 7 2 223322222 2233567777653
No 430
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.60 E-value=0.022 Score=51.96 Aligned_cols=69 Identities=20% Similarity=0.179 Sum_probs=45.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchh--hhcC--CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~--~~~~--~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.|+||||+||++++..|..++ .+++.++.+..... .+.. ....+... ...+.+.++++++|.||.+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~--~~~~~~y~~~~daDivvit 75 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGY--LGPEELKKALKGADVVVIP 75 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEe--cCCCchHHhcCCCCEEEEe
Confidence 589999999999999999998888 47888877621111 1111 11122211 0112356889999999988
No 431
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=95.60 E-value=0.076 Score=46.17 Aligned_cols=92 Identities=11% Similarity=0.086 Sum_probs=54.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-ChhH-
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF- 174 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g~- 174 (209)
.+..+|||+|+ |.+|+.+++.+...|++|.+++++.++.......+++.+..+ .+.......-.++|.||.+ ..+.
T Consensus 161 ~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~d~vi~~~~~~~~ 238 (330)
T cd08245 161 RPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDS-GAELDEQAAAGGADVILVTVVSGAA 238 (330)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEecc-CCcchHHhccCCCCEEEECCCcHHH
Confidence 34678999976 559999999999999999999988765432211122222211 2222222223579999987 3222
Q ss_pred ---HHHHHHhCCCCEEEEecc
Q 028418 175 ---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS 192 (209)
.++..+..| ++|.++.
T Consensus 239 ~~~~~~~l~~~G--~~i~~~~ 257 (330)
T cd08245 239 AEAALGGLRRGG--RIVLVGL 257 (330)
T ss_pred HHHHHHhcccCC--EEEEECC
Confidence 333333334 7777653
No 432
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.58 E-value=0.16 Score=42.26 Aligned_cols=91 Identities=10% Similarity=0.114 Sum_probs=58.9
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCC---c---------------chh------hhcCCc--eEEEEccCCC
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---R---------------NAM------ESFGTY--VESMAGDASN 153 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~---~---------------~a~------~~~~~~--vevv~GDl~D 153 (209)
+|+|.|+ |-+|+.++..|...|.. ++.++.+. + ++. ....+. ++.+...++.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~ 79 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE 79 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence 5899996 88999999999999985 88887654 1 110 111233 3445555543
Q ss_pred HHHHHHhhcCCcEEEEcCh-----hHHHHHHHhC-CCCEEEEecccc
Q 028418 154 KKFLKTALRGVRSIICPSE-----GFISNAGSLK-GVQHVILLSQRQ 194 (209)
Q Consensus 154 ~~sL~~AL~GvDaVIh~a~-----g~ll~AA~~a-GVkriV~vSS~~ 194 (209)
+.+.+.++++|.||.+.+ -.+.+.+.+. ++. +|+.+..+
T Consensus 80 -~~~~~~l~~~DlVi~~~d~~~~r~~i~~~~~~~~~ip-~i~~~~~~ 124 (174)
T cd01487 80 -NNLEGLFGDCDIVVEAFDNAETKAMLAESLLGNKNKP-VVCASGMA 124 (174)
T ss_pred -hhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHCCCC-EEEEehhh
Confidence 567788999999998821 1256666665 644 55554333
No 433
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.56 E-value=0.13 Score=43.89 Aligned_cols=102 Identities=12% Similarity=0.130 Sum_probs=65.8
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeC---Ccchhh---------------------hcCCc--eEEE
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAME---------------------SFGTY--VESM 147 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~---~~~a~~---------------------~~~~~--vevv 147 (209)
+.....+|+|.|+ |.+|+.++..|...|+ +++..+++ .+.... ...+. ++.+
T Consensus 17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~ 95 (200)
T TIGR02354 17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAY 95 (200)
T ss_pred HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEe
Confidence 4556779999998 6699999999999998 58888876 221110 11122 4455
Q ss_pred EccCCCHHHHHHhhcCCcEEEEcCh--h---HHHHHH-HhCCCCEEEEecccccccC
Q 028418 148 AGDASNKKFLKTALRGVRSIICPSE--G---FISNAG-SLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a~--g---~ll~AA-~~aGVkriV~vSS~~Vyg~ 198 (209)
..+++ .+.+.+.++++|.||-+.+ . .+.+.+ +..+.+.+++.|...-++.
T Consensus 96 ~~~i~-~~~~~~~~~~~DlVi~a~Dn~~~k~~l~~~~~~~~~~~~ii~~~g~~g~~~ 151 (200)
T TIGR02354 96 DEKIT-EENIDKFFKDADIVCEAFDNAEAKAMLVNAVLEKYKDKYLIAASGLAGYDD 151 (200)
T ss_pred eeeCC-HhHHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHcCCCcEEEEeccccCCC
Confidence 55554 5678888999999998721 1 245554 4455566666544444443
No 434
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.56 E-value=0.07 Score=47.26 Aligned_cols=71 Identities=11% Similarity=0.083 Sum_probs=47.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-------CC----ceE-EEEccCCCHHHHHHhhcCCcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GT----YVE-SMAGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-------~~----~ve-vv~GDl~D~~sL~~AL~GvDa 166 (209)
.++|.|.|+ |.+|..++..|+..|++|++..++++...... +. ... ...+.+.-..++.++++++|.
T Consensus 4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDl 82 (311)
T PRK06130 4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADL 82 (311)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCE
Confidence 468999976 99999999999999999999998876543211 10 000 000001111235677899999
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
||.+
T Consensus 83 Vi~a 86 (311)
T PRK06130 83 VIEA 86 (311)
T ss_pred EEEe
Confidence 9987
No 435
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=95.55 E-value=0.067 Score=49.42 Aligned_cols=72 Identities=15% Similarity=0.159 Sum_probs=51.5
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh--hhcCCceEEEEccCCCHHHHHHhhc----CCcEEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALR----GVRSIIC 169 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~--~~~~~~vevv~GDl~D~~sL~~AL~----GvDaVIh 169 (209)
..+++.|||.||+|-+|+.+++.+...+..+++.+++.++.+ ..++ ++ ...|+.+++.++...+ ++|.|+.
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lG--Ad-~vvdy~~~~~~e~~kk~~~~~~DvVlD 231 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLG--AD-EVVDYKDENVVELIKKYTGKGVDVVLD 231 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcC--Cc-EeecCCCHHHHHHHHhhcCCCccEEEE
Confidence 345678999999999999999988888944444445554432 2333 22 3457888777776666 7999999
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 232 ~ 232 (347)
T KOG1198|consen 232 C 232 (347)
T ss_pred C
Confidence 8
No 436
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.50 E-value=0.17 Score=43.43 Aligned_cols=101 Identities=8% Similarity=0.138 Sum_probs=65.6
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCC---c---------------chh------hhcCCc--eEEE
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---R---------------NAM------ESFGTY--VESM 147 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~---~---------------~a~------~~~~~~--vevv 147 (209)
+.....+|+|.|+ |-+|+.++..|...|.. ++.++.+. + ++. ....+. ++.+
T Consensus 24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~ 102 (212)
T PRK08644 24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAH 102 (212)
T ss_pred HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 3556779999996 78999999999999975 77777652 1 110 011233 4445
Q ss_pred EccCCCHHHHHHhhcCCcEEEEcCh-----hHHHHHHHhC-CCCEEEEecccccccC
Q 028418 148 AGDASNKKFLKTALRGVRSIICPSE-----GFISNAGSLK-GVQHVILLSQRQRWHS 198 (209)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a~-----g~ll~AA~~a-GVkriV~vSS~~Vyg~ 198 (209)
...+++ +.+.+.++++|.||.+.+ -.+.+.|.+. ++ .+|+.+..+-++.
T Consensus 103 ~~~i~~-~~~~~~~~~~DvVI~a~D~~~~r~~l~~~~~~~~~~-p~I~~~~~~~~~~ 157 (212)
T PRK08644 103 NEKIDE-DNIEELFKDCDIVVEAFDNAETKAMLVETVLEHPGK-KLVAASGMAGYGD 157 (212)
T ss_pred eeecCH-HHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHhCCC-CEEEeehhhccCC
Confidence 555544 556778899999997721 1266778777 64 4666655444443
No 437
>PRK06223 malate dehydrogenase; Reviewed
Probab=95.50 E-value=0.025 Score=50.16 Aligned_cols=70 Identities=10% Similarity=0.129 Sum_probs=45.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhc----CC-ceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF----GT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~----~~-~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.|| |.+|..++..|...|. +|+.++++++.+.... .. ........+.-...+ ++++++|.||.+
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~ 77 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVIT 77 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEEC
Confidence 579999999 9999999999988875 8999998776543211 00 000000111111123 468999999987
No 438
>PLN00203 glutamyl-tRNA reductase
Probab=95.45 E-value=0.021 Score=55.52 Aligned_cols=70 Identities=13% Similarity=0.180 Sum_probs=52.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcC--CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~--~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++|+|.|+ |.+|+.+++.|+..|. +|.+..|+++++..... .++.+. +...+.+.+++.++|.||.+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~---~~~~~dl~~al~~aDVVIsA 336 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII---YKPLDEMLACAAEADVVFTS 336 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE---eecHhhHHHHHhcCCEEEEc
Confidence 44678999999 9999999999999996 69999999877654321 122222 23334567889999999987
No 439
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=95.43 E-value=0.079 Score=45.11 Aligned_cols=94 Identities=13% Similarity=0.066 Sum_probs=57.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC-HHHHHHhhcCCcEEEEcChhH-
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSEGF- 174 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D-~~sL~~AL~GvDaVIh~a~g~- 174 (209)
.+..+|||.||+|.+|..+++.+...|.+|.++++++++.......+++.+..+-.+ ...+.+.=+++|.++.+..+.
T Consensus 141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~~ 220 (320)
T cd08243 141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTAT 220 (320)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEecCccHHHHHHHhCCCceEEEECCChHH
Confidence 346799999999999999999999999999999988765433222223333222111 222332224789999873222
Q ss_pred ---HHHHHHhCCCCEEEEecc
Q 028418 175 ---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS 192 (209)
.++..... .++|.++.
T Consensus 221 ~~~~~~~l~~~--g~~v~~g~ 239 (320)
T cd08243 221 LKDSLRHLRPG--GIVCMTGL 239 (320)
T ss_pred HHHHHHHhccC--CEEEEEcc
Confidence 22222222 46776654
No 440
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=95.41 E-value=0.11 Score=47.02 Aligned_cols=85 Identities=11% Similarity=0.072 Sum_probs=57.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhhhcCCceEEEEccCCCHHHHHHhhcC--CcEEEEc-C-hh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRG--VRSIICP-S-EG 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~~~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~-a-~g 173 (209)
+.+|+|-|-||.+|+.+++.|++.|+++...| +|.. ..+.++ + .--.++.++-+. +|.++.+ . ..
T Consensus 8 ~~~~~v~~~~~~~g~~~l~~l~~~g~~~v~pV-np~~~~~~v~G--~-------~~y~sv~dlp~~~~~DlAvi~vp~~~ 77 (291)
T PRK05678 8 DTKVIVQGITGKQGTFHTEQMLAYGTNIVGGV-TPGKGGTTVLG--L-------PVFNTVAEAVEATGANASVIYVPPPF 77 (291)
T ss_pred CCeEEEeCCCchHHHHHHHHHHHCCCCEEEEE-CCCCCCCeEeC--e-------eccCCHHHHhhccCCCEEEEEcCHHH
Confidence 45899999999999999999999998854455 4431 112222 1 112344555554 8988776 2 22
Q ss_pred --HHHHHHHhCCCCEEEEeccc
Q 028418 174 --FISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 174 --~ll~AA~~aGVkriV~vSS~ 193 (209)
..++.|.+.||+.+|.+|+.
T Consensus 78 v~~~l~e~~~~gvk~avI~s~G 99 (291)
T PRK05678 78 AADAILEAIDAGIDLIVCITEG 99 (291)
T ss_pred HHHHHHHHHHCCCCEEEEECCC
Confidence 26677788999998888874
No 441
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.41 E-value=0.041 Score=48.92 Aligned_cols=67 Identities=12% Similarity=0.013 Sum_probs=46.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..++|+|.| .|.+|..++..|...|+ +|.+..|+++........++... + .....++++++|.||.+
T Consensus 5 ~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~---~--~~~~~~~~~~aDvViia 73 (307)
T PRK07502 5 LFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDR---V--TTSAAEAVKGADLVILC 73 (307)
T ss_pred CCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCce---e--cCCHHHHhcCCCEEEEC
Confidence 346899998 99999999999999985 88888888765433221111100 1 11245677889999987
No 442
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.40 E-value=0.043 Score=50.13 Aligned_cols=64 Identities=13% Similarity=0.033 Sum_probs=44.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-------cEEEEEeCCcc--hh----hhcC------CceEEEEccCCCHHHHHHh
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRN--AM----ESFG------TYVESMAGDASNKKFLKTA 160 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~-------~VraLvR~~~~--a~----~~~~------~~vevv~GDl~D~~sL~~A 160 (209)
.+|.|+||+|+||+.++..|+.++. +++.++.+... +. .+.. .++++. ....++
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~~~~ 75 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-------DDPNVA 75 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-------cCcHHH
Confidence 3899999999999999999998875 78888874322 21 1111 122221 122678
Q ss_pred hcCCcEEEEc
Q 028418 161 LRGVRSIICP 170 (209)
Q Consensus 161 L~GvDaVIh~ 170 (209)
++++|.||.+
T Consensus 76 ~~daDivvit 85 (322)
T cd01338 76 FKDADWALLV 85 (322)
T ss_pred hCCCCEEEEe
Confidence 9999999998
No 443
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=95.38 E-value=0.063 Score=50.56 Aligned_cols=66 Identities=12% Similarity=0.137 Sum_probs=53.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
+++|.|.| .|.+|++++.+...-|++|+++.-++........ -+++..+++|++.+++..+.||+|
T Consensus 1 ~~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va--~~~i~~~~dD~~al~ela~~~DVi 66 (375)
T COG0026 1 MKTVGILG-GGQLGRMMALAAARLGIKVIVLDPDADAPAAQVA--DRVIVAAYDDPEALRELAAKCDVI 66 (375)
T ss_pred CCeEEEEc-CcHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc--cceeecCCCCHHHHHHHHhhCCEE
Confidence 46888988 5999999999999999999999865543322222 267888999999999999999998
No 444
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=95.37 E-value=0.082 Score=45.54 Aligned_cols=92 Identities=8% Similarity=0.116 Sum_probs=57.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH---HHHHHhhc--CCcEEEEcCh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPSE 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~---~sL~~AL~--GvDaVIh~a~ 172 (209)
+..+|||.||+|.+|..+++.+...|.+|.+++++.++.......+++.+. +..+. ..+.+... |+|.||.+..
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~i~~~~~~~~~d~v~d~~g 217 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVV-STEQPGWQDKVREAAGGAPISVALDSVG 217 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEE-cCCCchHHHHHHHHhCCCCCcEEEECCC
Confidence 567999999999999999999999999999999877654322112232221 22222 33444554 6999998722
Q ss_pred h-H---HHHHHHhCCCCEEEEecc
Q 028418 173 G-F---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 g-~---ll~AA~~aGVkriV~vSS 192 (209)
+ . .++..+ .-.+||.++.
T Consensus 218 ~~~~~~~~~~l~--~~g~~v~~g~ 239 (324)
T cd08292 218 GKLAGELLSLLG--EGGTLVSFGS 239 (324)
T ss_pred ChhHHHHHHhhc--CCcEEEEEec
Confidence 2 2 222222 2256777653
No 445
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=95.37 E-value=0.15 Score=45.95 Aligned_cols=92 Identities=9% Similarity=0.012 Sum_probs=56.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCH---HHHHHhhc-CCcEEEEcC-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR-GVRSIICPS- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~---~sL~~AL~-GvDaVIh~a- 171 (209)
+.++|||+|+ |.||...+..+...|. +|.++++++++......-+++.+ .|..+. +.+.+... ++|.||.+.
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~-i~~~~~~~~~~i~~~~~~g~d~vid~~G 268 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATAT-VNAGDPNAVEQVRELTGGGVDYAFEMAG 268 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceE-eCCCchhHHHHHHHHhCCCCCEEEECCC
Confidence 4679999985 9999999988888998 58888887766432211223222 223332 23444433 689999872
Q ss_pred -hhH---HHHHHHhCCCCEEEEeccc
Q 028418 172 -EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 -~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
... .++..+.. .++|.++..
T Consensus 269 ~~~~~~~~~~~l~~~--G~iv~~G~~ 292 (371)
T cd08281 269 SVPALETAYEITRRG--GTTVTAGLP 292 (371)
T ss_pred ChHHHHHHHHHHhcC--CEEEEEccC
Confidence 222 34444443 367776543
No 446
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=95.34 E-value=0.17 Score=45.45 Aligned_cols=94 Identities=13% Similarity=0.062 Sum_probs=56.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCC--H---HHHHHhhc-CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN--K---KFLKTALR-GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D--~---~sL~~AL~-GvDaVIh 169 (209)
.+.++|||.|+ |.+|...++.+...|. +|.++++++++.......+++.+. |..+ + ..+.+... ++|.||.
T Consensus 186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i-~~~~~~~~~~~~v~~~~~~~~d~vid 263 (369)
T cd08301 186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFV-NPKDHDKPVQEVIAEMTGGGVDYSFE 263 (369)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEE-cccccchhHHHHHHHHhCCCCCEEEE
Confidence 35779999985 9999999998889998 799999887665432222222211 2222 1 22333332 6899998
Q ss_pred cC-hh-H---HHHHHHhCCCCEEEEeccc
Q 028418 170 PS-EG-F---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 170 ~a-~g-~---ll~AA~~aGVkriV~vSS~ 193 (209)
+. .. . .+++. +.+-.++|.++..
T Consensus 264 ~~G~~~~~~~~~~~~-~~~~g~~v~~g~~ 291 (369)
T cd08301 264 CTGNIDAMISAFECV-HDGWGVTVLLGVP 291 (369)
T ss_pred CCCChHHHHHHHHHh-hcCCCEEEEECcC
Confidence 72 22 2 23333 2222578877654
No 447
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=95.32 E-value=0.19 Score=43.20 Aligned_cols=91 Identities=16% Similarity=0.071 Sum_probs=56.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH-HHHHHhh--cCCcEEEEcChhH--
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTAL--RGVRSIICPSEGF-- 174 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~-~sL~~AL--~GvDaVIh~a~g~-- 174 (209)
.+|||.|++|.+|..+++.+...|.+|.+++++.++.......+++.+. |..+. ..+.+.+ +++|.||.+..+.
T Consensus 148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~ 226 (325)
T cd05280 148 GPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVL-DREDLLDESKKPLLKARWAGAIDTVGGDVL 226 (325)
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEE-cchhHHHHHHHHhcCCCccEEEECCchHHH
Confidence 5899999999999999998899999999999887654332222233221 22222 1233333 3689999873222
Q ss_pred --HHHHHHhCCCCEEEEeccc
Q 028418 175 --ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 --ll~AA~~aGVkriV~vSS~ 193 (209)
.++..... .++|.++..
T Consensus 227 ~~~~~~l~~~--g~~v~~g~~ 245 (325)
T cd05280 227 ANLLKQTKYG--GVVASCGNA 245 (325)
T ss_pred HHHHHhhcCC--CEEEEEecC
Confidence 33333333 467766543
No 448
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=95.30 E-value=0.13 Score=45.84 Aligned_cols=40 Identities=15% Similarity=0.207 Sum_probs=34.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~ 137 (209)
.+.++|||.|+ |.+|...++.+...|.+|.++++++++..
T Consensus 165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~ 204 (349)
T TIGR03201 165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLE 204 (349)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence 34679999999 99999999999999999999988876654
No 449
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=95.29 E-value=0.065 Score=48.00 Aligned_cols=63 Identities=11% Similarity=0.165 Sum_probs=45.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchhhhc----------CCceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESF----------GTYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~~~~----------~~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
++|.|.|+ |.+|+.++..|+.+| ++|.++.|+++++.... +..+.+.. .+ .++++++|.|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~----~~~l~~aDIV 72 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GD----YSDCKDADIV 72 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CC----HHHhCCCCEE
Confidence 37999996 999999999999999 68999999887654211 11222322 22 2357999999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
|.+
T Consensus 73 Iit 75 (306)
T cd05291 73 VIT 75 (306)
T ss_pred EEc
Confidence 998
No 450
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=95.29 E-value=0.041 Score=50.15 Aligned_cols=68 Identities=19% Similarity=0.187 Sum_probs=44.8
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchh--hhcC--CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM--ESFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~--~~~~--~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+|.|+||+|+||++++..|..++. +++.+++++.... .+.. ....+.... +.+.+.++++|+|.||.+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvit 74 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIP 74 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEe
Confidence 589999999999999999988875 7888887662211 1111 111222101 112356799999999988
No 451
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=95.29 E-value=0.084 Score=48.47 Aligned_cols=93 Identities=13% Similarity=0.082 Sum_probs=55.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcc-hhhh---cCCc--------eEEEE-ccCCCHHHHHHhhcCC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRN-AMES---FGTY--------VESMA-GDASNKKFLKTALRGV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~-a~~~---~~~~--------vevv~-GDl~D~~sL~~AL~Gv 164 (209)
+.+|.|.|+ |.||+.+++.+.++ +.+++++...... ...+ .+.. ++.+. .++.=...+.+.+.++
T Consensus 1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~v 79 (341)
T PRK04207 1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKA 79 (341)
T ss_pred CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccC
Confidence 458999999 99999999988754 6888888742211 1100 1100 00000 0010011244556789
Q ss_pred cEEEEcC-hh---HHHHHHHhCCCCEEEEeccc
Q 028418 165 RSIICPS-EG---FISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 165 DaVIh~a-~g---~ll~AA~~aGVkriV~vSS~ 193 (209)
|+||.++ .. ..+..+.++| +++|+.++.
T Consensus 80 DVVIdaT~~~~~~e~a~~~~~aG-k~VI~~~~~ 111 (341)
T PRK04207 80 DIVVDATPGGVGAKNKELYEKAG-VKAIFQGGE 111 (341)
T ss_pred CEEEECCCchhhHHHHHHHHHCC-CEEEEcCCC
Confidence 9999873 11 2667788889 778877763
No 452
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.24 E-value=0.023 Score=49.89 Aligned_cols=39 Identities=15% Similarity=0.193 Sum_probs=34.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~ 137 (209)
..++++|+|+ |.+|+.++..|...|++|.+..|+++++.
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~ 154 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAE 154 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4568999998 89999999999999999999999887654
No 453
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=95.23 E-value=0.07 Score=46.22 Aligned_cols=91 Identities=12% Similarity=0.034 Sum_probs=54.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchhhhcCCceEEEEccCCC-HHHHHHhh--cCCcEEEEcC--
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTAL--RGVRSIICPS-- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~~~~~~~vevv~GDl~D-~~sL~~AL--~GvDaVIh~a-- 171 (209)
+.++|||.|+ |.||...++.+...|.+ |.++.+++++.......+++.+. |..+ .+.+.+.. +|+|.||.+.
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i-~~~~~~~~~~~~~~~~g~d~vid~~G~ 197 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALA-EPEVLAERQGGLQNGRGVDVALEFSGA 197 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEec-CchhhHHHHHHHhCCCCCCEEEECCCC
Confidence 5779999987 89999999888889987 77777666554322111232221 2222 23333333 4789999872
Q ss_pred hhH---HHHHHHhCCCCEEEEecc
Q 028418 172 EGF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 ~g~---ll~AA~~aGVkriV~vSS 192 (209)
... .++..+.. .++|.++.
T Consensus 198 ~~~~~~~~~~l~~~--G~iv~~G~ 219 (280)
T TIGR03366 198 TAAVRACLESLDVG--GTAVLAGS 219 (280)
T ss_pred hHHHHHHHHHhcCC--CEEEEecc
Confidence 222 33333333 47777764
No 454
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=95.22 E-value=0.071 Score=46.08 Aligned_cols=92 Identities=13% Similarity=0.049 Sum_probs=56.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC--HHHHHHhh-cCCcEEEEcChhH-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTAL-RGVRSIICPSEGF- 174 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D--~~sL~~AL-~GvDaVIh~a~g~- 174 (209)
..+|||.|++|.+|..+++.+...|.+|.++++++++.......+++.+ .|..+ ...+.+.. .++|.||.+..+.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~d~vld~~g~~~ 225 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEV-IPREELQEESIKPLEKQRWAGAVDPVGGKT 225 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEE-EcchhHHHHHHHhhccCCcCEEEECCcHHH
Confidence 4699999999999999999999999999999988866443222223222 11222 23333332 4689999872121
Q ss_pred ---HHHHHHhCCCCEEEEeccc
Q 028418 175 ---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS~ 193 (209)
.++..+.. .++|.++..
T Consensus 226 ~~~~~~~l~~~--G~~i~~g~~ 245 (326)
T cd08289 226 LAYLLSTLQYG--GSVAVSGLT 245 (326)
T ss_pred HHHHHHHhhcC--CEEEEEeec
Confidence 23333332 467776543
No 455
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=95.22 E-value=0.12 Score=46.64 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=28.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEE-eCCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALV-KDKR 134 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLv-R~~~ 134 (209)
+++|+|.||+|..|+.+++.+.+.. +++.+.. |+++
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence 5789999999999999999988764 6655554 5443
No 456
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.22 E-value=0.12 Score=48.45 Aligned_cols=81 Identities=10% Similarity=0.019 Sum_probs=54.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-----hhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-----~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a 171 (209)
..++|+|.|+ |.+|..+++.|.++|++|.++.+++... ..+...+++++.++-.. ...++|.||.. +
T Consensus 15 ~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s~G 87 (480)
T PRK01438 15 QGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------LPEDTDLVVTSPG 87 (480)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEECCC
Confidence 3568999996 8899999999999999999998654211 12223467777665432 34568988876 2
Q ss_pred ---hhHHHHHHHhCCCC
Q 028418 172 ---EGFISNAGSLKGVQ 185 (209)
Q Consensus 172 ---~g~ll~AA~~aGVk 185 (209)
.-.++..|++.|++
T Consensus 88 i~~~~~~~~~a~~~gi~ 104 (480)
T PRK01438 88 WRPDAPLLAAAADAGIP 104 (480)
T ss_pred cCCCCHHHHHHHHCCCe
Confidence 11255555666543
No 457
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.21 E-value=0.02 Score=50.52 Aligned_cols=71 Identities=10% Similarity=0.064 Sum_probs=47.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-------C---CceEEEE--------ccCCCHHHHHHh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------G---TYVESMA--------GDASNKKFLKTA 160 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-------~---~~vevv~--------GDl~D~~sL~~A 160 (209)
.++|.|.|+ |.+|+.++..|..+|++|++..++++...... . ....... ..+.-..++.++
T Consensus 3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a 81 (287)
T PRK08293 3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEA 81 (287)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHH
Confidence 368999985 99999999999999999999999876432110 0 0000000 011111346778
Q ss_pred hcCCcEEEEc
Q 028418 161 LRGVRSIICP 170 (209)
Q Consensus 161 L~GvDaVIh~ 170 (209)
++++|.||.+
T Consensus 82 ~~~aDlViea 91 (287)
T PRK08293 82 VKDADLVIEA 91 (287)
T ss_pred hcCCCEEEEe
Confidence 9999999987
No 458
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=95.20 E-value=0.065 Score=47.70 Aligned_cols=66 Identities=9% Similarity=-0.033 Sum_probs=44.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.|.| .|.+|+.+++.|+++|++|.+..|++++.......++.. ..+++.+.+....+|.||.+
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~----~~s~~~~~~~~~~advVi~~ 66 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITA----RHSLEELVSKLEAPRTIWVM 66 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCee----cCCHHHHHHhCCCCCEEEEE
Confidence 3688886 899999999999999999999999887654332222222 22333333333346777766
No 459
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.20 E-value=0.1 Score=42.82 Aligned_cols=68 Identities=12% Similarity=0.134 Sum_probs=46.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+..+++|||.| .|.+|.+.++.|++.|++|+++..........+ ..+++....+... -++++|.||.+
T Consensus 10 ~l~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp~~~~~l~~l-~~i~~~~~~~~~~-----dl~~a~lViaa 77 (157)
T PRK06719 10 NLHNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSPEICKEMKEL-PYITWKQKTFSND-----DIKDAHLIYAA 77 (157)
T ss_pred EcCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCccCHHHHhc-cCcEEEecccChh-----cCCCceEEEEC
Confidence 45678899998 589999999999999999998853222211112 2355554444332 26889999987
No 460
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.18 E-value=0.031 Score=52.84 Aligned_cols=71 Identities=13% Similarity=0.148 Sum_probs=53.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
....++|||.|+ |.+|+.++..|...|. ++.+..|+.+++..+... .. .+.+...+.+.+++..+|.||.+
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~-~~--~~~~~~~~~l~~~l~~aDiVI~a 249 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSA-FR--NASAHYLSELPQLIKKADIIIAA 249 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-hc--CCeEecHHHHHHHhccCCEEEEC
Confidence 455679999998 9999999999999995 688888988776543221 10 02233446778889999999998
No 461
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=95.15 E-value=0.19 Score=45.42 Aligned_cols=95 Identities=19% Similarity=0.106 Sum_probs=56.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCC--H---HHHHHhhc-CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN--K---KFLKTALR-GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D--~---~sL~~AL~-GvDaVIh 169 (209)
.+.++|||+|+ |.||...++.+...|. +|.++++++++......-+++.+ .|..+ . +.+.++.. |+|.||.
T Consensus 184 ~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~-i~~~~~~~~~~~~v~~~~~~g~d~vid 261 (368)
T TIGR02818 184 EEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDC-VNPNDYDKPIQEVIVEITDGGVDYSFE 261 (368)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeE-EcccccchhHHHHHHHHhCCCCCEEEE
Confidence 34679999986 9999999988888998 79888887766443222223221 13322 1 23434433 7999998
Q ss_pred cC--hhHHHHHH--HhCCCCEEEEeccc
Q 028418 170 PS--EGFISNAG--SLKGVQHVILLSQR 193 (209)
Q Consensus 170 ~a--~g~ll~AA--~~aGVkriV~vSS~ 193 (209)
+. ...+.++. .+.+-.++|.++..
T Consensus 262 ~~G~~~~~~~~~~~~~~~~G~~v~~g~~ 289 (368)
T TIGR02818 262 CIGNVNVMRAALECCHKGWGESIIIGVA 289 (368)
T ss_pred CCCCHHHHHHHHHHhhcCCCeEEEEecc
Confidence 72 22222222 22333578877653
No 462
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.14 E-value=0.14 Score=48.93 Aligned_cols=85 Identities=14% Similarity=0.084 Sum_probs=57.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C---
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--- 171 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a--- 171 (209)
..+.++|+|.| .|-+|...++.|..+|++|.+.++++.....+...+++++.++. + .+.++++|.||.. +
T Consensus 9 ~~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~-~----~~~l~~~D~VV~SpGi~~ 82 (488)
T PRK03369 9 LLPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSD-A----VQQIADYALVVTSPGFRP 82 (488)
T ss_pred ccCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcc-h----HhHhhcCCEEEECCCCCC
Confidence 44567899999 77899999999999999999988665433222223566654433 1 2345778988876 2
Q ss_pred hhHHHHHHHhCCCCE
Q 028418 172 EGFISNAGSLKGVQH 186 (209)
Q Consensus 172 ~g~ll~AA~~aGVkr 186 (209)
.-.++.+|++.|++-
T Consensus 83 ~~p~~~~a~~~gi~v 97 (488)
T PRK03369 83 TAPVLAAAAAAGVPI 97 (488)
T ss_pred CCHHHHHHHHCCCcE
Confidence 223677777777653
No 463
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional
Probab=95.10 E-value=0.17 Score=46.72 Aligned_cols=89 Identities=10% Similarity=0.024 Sum_probs=62.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC--CcEEEEc--Chh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICP--SEG 173 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~--a~g 173 (209)
...+|+|-|=||..|+.-+++.++.|-+|++-|-..+--.... ...+-=-+++.++.+. +|.++.+ +..
T Consensus 28 ~~t~v~vqGitg~~g~~h~~~~~~ygt~iv~GV~Pgkgg~~v~-------~~Gvpvy~sv~ea~~~~~~D~avI~VPa~~ 100 (317)
T PTZ00187 28 KNTKVICQGITGKQGTFHTEQAIEYGTKMVGGVNPKKAGTTHL-------KHGLPVFATVKEAKKATGADASVIYVPPPH 100 (317)
T ss_pred CCCeEEEecCCChHHHHHHHHHHHhCCcEEEEECCCCCCceEe-------cCCccccCCHHHHhcccCCCEEEEecCHHH
Confidence 3469999999999999999999999999999994333111111 1123333467777765 8987766 221
Q ss_pred --HHHHHHHhCCCCEEEEeccc
Q 028418 174 --FISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 174 --~ll~AA~~aGVkriV~vSS~ 193 (209)
..+..|.++|++.+|.+|+.
T Consensus 101 v~dai~Ea~~aGI~~~ViiteG 122 (317)
T PTZ00187 101 AASAIIEAIEAEIPLVVCITEG 122 (317)
T ss_pred HHHHHHHHHHcCCCEEEEECCC
Confidence 14555678999999998874
No 464
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=95.10 E-value=0.23 Score=44.71 Aligned_cols=95 Identities=15% Similarity=0.051 Sum_probs=57.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCH-----HHHHHhhc-CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK-----KFLKTALR-GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~-----~sL~~AL~-GvDaVIh 169 (209)
.+.++|||+|+ |.+|...++.+...|. +|.++++++++......-+++.+ .|..+. +.+.+... |+|.||.
T Consensus 185 ~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~v~~~~~~g~d~vid 262 (368)
T cd08300 185 EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDC-VNPKDHDKPIQQVLVEMTDGGVDYTFE 262 (368)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEE-EcccccchHHHHHHHHHhCCCCcEEEE
Confidence 45779999975 9999999999999999 69899888876543221223222 233322 22333332 6999998
Q ss_pred cC--hhHHHHHHH--hCCCCEEEEeccc
Q 028418 170 PS--EGFISNAGS--LKGVQHVILLSQR 193 (209)
Q Consensus 170 ~a--~g~ll~AA~--~aGVkriV~vSS~ 193 (209)
+. ...+.++.. +.+-.++|.++..
T Consensus 263 ~~g~~~~~~~a~~~l~~~~G~~v~~g~~ 290 (368)
T cd08300 263 CIGNVKVMRAALEACHKGWGTSVIIGVA 290 (368)
T ss_pred CCCChHHHHHHHHhhccCCCeEEEEccC
Confidence 72 223222222 2233588877643
No 465
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=95.08 E-value=0.32 Score=41.26 Aligned_cols=99 Identities=11% Similarity=0.117 Sum_probs=63.9
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcc-------------------h------hhhcCCc--eEE
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN-------------------A------MESFGTY--VES 146 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~-------------------a------~~~~~~~--vev 146 (209)
+...+.+|+|.|+.| +|.++++.|...|.. ++.++.+.-. + .....+. +++
T Consensus 17 ~~L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~ 95 (197)
T cd01492 17 KRLRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSV 95 (197)
T ss_pred HHHHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEE
Confidence 344577999999877 999999999999975 6666533210 0 0112233 344
Q ss_pred EEccCCCHHHHHHhhcCCcEEEEcC--hh---HHHHHHHhCCCCEEEEeccccccc
Q 028418 147 MAGDASNKKFLKTALRGVRSIICPS--EG---FISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 147 v~GDl~D~~sL~~AL~GvDaVIh~a--~g---~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
....+.+ ...+-++++|.||.+. .. .+-++|++.++. +|+.++.+.+|
T Consensus 96 ~~~~~~~--~~~~~~~~~dvVi~~~~~~~~~~~ln~~c~~~~ip-~i~~~~~G~~G 148 (197)
T cd01492 96 DTDDISE--KPEEFFSQFDVVVATELSRAELVKINELCRKLGVK-FYATGVHGLFG 148 (197)
T ss_pred EecCccc--cHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEecCCEE
Confidence 4444542 2345578999999872 22 266788999975 67777766554
No 466
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.08 E-value=0.19 Score=46.88 Aligned_cols=81 Identities=15% Similarity=0.106 Sum_probs=54.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hhhcC---CceEEEEccCCCHHHHHHhhcCCcEEEEc-C--
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFG---TYVESMAGDASNKKFLKTALRGVRSIICP-S-- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~~~~---~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a-- 171 (209)
.++|+|+|+ |.+|..+++.|.++|++|.+..+++... ...+. .++.+..+...+ ..+.++|.||.. +
T Consensus 5 ~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~~-----~~~~~~d~vv~spgi~ 78 (445)
T PRK04308 5 NKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLKD-----ALDNGFDILALSPGIS 78 (445)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCCH-----HHHhCCCEEEECCCCC
Confidence 568999997 4799999999999999999998765432 11121 357776665432 134688999986 2
Q ss_pred h-hHHHHHHHhCCCC
Q 028418 172 E-GFISNAGSLKGVQ 185 (209)
Q Consensus 172 ~-g~ll~AA~~aGVk 185 (209)
. -..+.+|++.|++
T Consensus 79 ~~~p~~~~a~~~~i~ 93 (445)
T PRK04308 79 ERQPDIEAFKQNGGR 93 (445)
T ss_pred CCCHHHHHHHHcCCc
Confidence 1 1255666666654
No 467
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=95.07 E-value=0.027 Score=52.28 Aligned_cols=70 Identities=14% Similarity=0.042 Sum_probs=47.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEE------------E-EccCCCHHHHHHhhcCCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVES------------M-AGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vev------------v-~GDl~D~~sL~~AL~GvDa 166 (209)
|+|.|.| .|.+|..++..|.++||+|.+..|++++...+......+ + .+-+.-..++.++++++|.
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv 79 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV 79 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence 4688886 699999999999999999999999887654332110000 0 0111112245677899999
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
||.+
T Consensus 80 vii~ 83 (411)
T TIGR03026 80 IIIC 83 (411)
T ss_pred EEEE
Confidence 9987
No 468
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=95.00 E-value=0.066 Score=51.31 Aligned_cols=71 Identities=11% Similarity=-0.038 Sum_probs=48.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC---------C---ceEE-EEccCCCHHHHHHhhcCCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG---------T---YVES-MAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~---------~---~vev-v~GDl~D~~sL~~AL~GvD 165 (209)
-++|.|. |+|.+|+.++..|+.+|++|++..|++++...... . .... ..+.+.=.+++.++++++|
T Consensus 4 i~kIavI-G~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD 82 (495)
T PRK07531 4 IMKAACI-GGGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGAD 82 (495)
T ss_pred cCEEEEE-CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCC
Confidence 3578888 58999999999999999999999998876432100 0 0000 0111111235678899999
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.||.+
T Consensus 83 ~Viea 87 (495)
T PRK07531 83 WIQES 87 (495)
T ss_pred EEEEc
Confidence 99987
No 469
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=94.99 E-value=0.085 Score=44.35 Aligned_cols=72 Identities=21% Similarity=0.188 Sum_probs=47.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhh--cCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL--RGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL--~GvDaVIh~ 170 (209)
+..+++|+|++|-+|..+++.+...|.+|.+++++.++.......+++.+ .+..+.+ .+.+.. +++|.+|++
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVA-INYRTEDFAEEVKEATGGRGVDVILDM 215 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEE-EeCCchhHHHHHHHHhCCCCeEEEEEC
Confidence 56799999999999999999999999999999887654332211112211 2223322 233333 368999987
No 470
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=94.98 E-value=0.056 Score=47.99 Aligned_cols=85 Identities=13% Similarity=0.086 Sum_probs=50.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHH--CCCcEEEEE-eCCcchhhhcCC-ceEEEEccCCCHHHHHHhhcCCcEEEEcC-hh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIV--KRTRIKALV-KDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS-EG 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~--~G~~VraLv-R~~~~a~~~~~~-~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~g 173 (209)
..+|.|.| .|.||+.+++.|.. .++++.++. |+++++...... +...+ +.+. ++.+..+|+|+.+. ..
T Consensus 6 ~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~---~~~~---eell~~~D~Vvi~tp~~ 78 (271)
T PRK13302 6 ELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPP---VVPL---DQLATHADIVVEAAPAS 78 (271)
T ss_pred eeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcc---cCCH---HHHhcCCCEEEECCCcH
Confidence 36899998 59999999999986 378887654 565554322110 11001 2343 44467899999872 11
Q ss_pred ---HHHHHHHhCCCCEEEEec
Q 028418 174 ---FISNAGSLKGVQHVILLS 191 (209)
Q Consensus 174 ---~ll~AA~~aGVkriV~vS 191 (209)
.+...+.++| ++++..|
T Consensus 79 ~h~e~~~~aL~aG-k~Vi~~s 98 (271)
T PRK13302 79 VLRAIVEPVLAAG-KKAIVLS 98 (271)
T ss_pred HHHHHHHHHHHcC-CcEEEec
Confidence 1444555566 4555544
No 471
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=94.98 E-value=0.025 Score=49.35 Aligned_cols=69 Identities=13% Similarity=0.121 Sum_probs=45.9
Q ss_pred EEEEcCCCHHHHHHHHHHHHCC----CcEEEEEeCCcchhhh---cCCceEEE-EccCCCHHHHHHhhcCCcEEEEc
Q 028418 102 VLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAMES---FGTYVESM-AGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G----~~VraLvR~~~~a~~~---~~~~vevv-~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|.|+||+|.+|..++..|+..+ .+|..++++++++... +....... ...+.-...+.++++++|.||.+
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t 77 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIIT 77 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEEC
Confidence 5799999999999999999888 7899999877654311 00000000 01111112357889999999996
No 472
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=94.97 E-value=0.086 Score=51.07 Aligned_cols=66 Identities=15% Similarity=0.081 Sum_probs=49.9
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
....++++|.| -|.||+.+++.|...|.+|.+..+++.+.......+++++ .+.++++.+|.||.+
T Consensus 251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~--------~leell~~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV--------TLEDVVETADIFVTA 316 (476)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec--------cHHHHHhcCCEEEEC
Confidence 45678999999 5689999999999999999999888766532222233332 366788999999876
No 473
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=94.96 E-value=0.076 Score=50.37 Aligned_cols=65 Identities=17% Similarity=0.046 Sum_probs=49.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..+++|+|.| .|.||+.+++.|...|.+|.+..+++.++......+++++ .+.++++++|.||.+
T Consensus 193 l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~--------~leeal~~aDVVIta 257 (406)
T TIGR00936 193 IAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVM--------TMEEAAKIGDIFITA 257 (406)
T ss_pred CCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeC--------CHHHHHhcCCEEEEC
Confidence 4677899998 7899999999999999999999888876543332333332 134577899999887
No 474
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=94.95 E-value=0.32 Score=42.25 Aligned_cols=93 Identities=9% Similarity=0.021 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCce-EEEEccCCC-HHHHHHhhc--CCcEEEEcChh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASN-KKFLKTALR--GVRSIICPSEG 173 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~v-evv~GDl~D-~~sL~~AL~--GvDaVIh~a~g 173 (209)
+..+++|.||+|.+|..+++.+...|.+|.++++++++.......++ +++..+-.+ .+.+.++.. ++|.++.+..+
T Consensus 140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~ 219 (327)
T PRK10754 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGK 219 (327)
T ss_pred CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcH
Confidence 46799999999999999999999999999999887765432211122 333222222 233445544 58999877322
Q ss_pred H----HHHHHHhCCCCEEEEecc
Q 028418 174 F----ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 174 ~----ll~AA~~aGVkriV~vSS 192 (209)
. .++..... .|+|.++.
T Consensus 220 ~~~~~~~~~l~~~--g~~v~~g~ 240 (327)
T PRK10754 220 DTWEASLDCLQRR--GLMVSFGN 240 (327)
T ss_pred HHHHHHHHHhccC--CEEEEEcc
Confidence 2 23333333 47777654
No 475
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.95 E-value=0.15 Score=48.37 Aligned_cols=84 Identities=12% Similarity=0.084 Sum_probs=56.1
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C--
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICP-S-- 171 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a-- 171 (209)
+..+++|+|.| .|-.|..+++.|+.+|++|.+.+|++...... ...++++..+.-. ++ -+.++|.||.. +
T Consensus 12 ~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~-~~----~~~~~d~vV~Spgi~ 85 (473)
T PRK00141 12 QELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEA-SD----QLDSFSLVVTSPGWR 85 (473)
T ss_pred cccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCc-hh----HhcCCCEEEeCCCCC
Confidence 44567899999 77899999999999999999998766543322 2235666655322 22 24678888876 2
Q ss_pred hh-HHHHHHHhCCCC
Q 028418 172 EG-FISNAGSLKGVQ 185 (209)
Q Consensus 172 ~g-~ll~AA~~aGVk 185 (209)
.. ..+.+|++.|++
T Consensus 86 ~~~p~~~~a~~~gi~ 100 (473)
T PRK00141 86 PDSPLLVDAQSQGLE 100 (473)
T ss_pred CCCHHHHHHHHCCCc
Confidence 11 256666666653
No 476
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=94.94 E-value=0.096 Score=48.72 Aligned_cols=94 Identities=12% Similarity=0.077 Sum_probs=60.9
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcChhH-
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a~g~- 174 (209)
..|.++|+|+|+. -+|.+-++.+...|.+|.+++|++++.+....-+.+.+.-.- |++.+.+.-+-+|.+|.+....
T Consensus 164 ~~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~-~~~~~~~~~~~~d~ii~tv~~~~ 241 (339)
T COG1064 164 VKPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSS-DSDALEAVKEIADAIIDTVGPAT 241 (339)
T ss_pred CCCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcC-CchhhHHhHhhCcEEEECCChhh
Confidence 5567899999998 899888888888999999999999887433222233333222 6655554444489998872122
Q ss_pred ---HHHHHHhCCCCEEEEeccc
Q 028418 175 ---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS~ 193 (209)
.+++.+..| ++|.+.-.
T Consensus 242 ~~~~l~~l~~~G--~~v~vG~~ 261 (339)
T COG1064 242 LEPSLKALRRGG--TLVLVGLP 261 (339)
T ss_pred HHHHHHHHhcCC--EEEEECCC
Confidence 334444333 45555443
No 477
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.94 E-value=0.45 Score=40.84 Aligned_cols=99 Identities=12% Similarity=0.057 Sum_probs=63.4
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCc-------------------chh------hhcCCc--eEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKR-------------------NAM------ESFGTY--VESM 147 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~-------------------~a~------~~~~~~--vevv 147 (209)
...+.+|+|.| .|-+|+++++.|...|.. +.+++.+.- ++. ....+. ++.+
T Consensus 18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 44567899999 567999999999999974 444432210 000 011122 4555
Q ss_pred EccCCCHHHHHHhhcCCcEEEEcCh-----hHHHHHHHhCCCCEEEEeccccccc
Q 028418 148 AGDASNKKFLKTALRGVRSIICPSE-----GFISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a~-----g~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
...+ +.+.+.+.++++|.||.+.+ -.+-++|.+.++ .+|+.+..+.+|
T Consensus 97 ~~~i-~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~i-p~i~~g~~g~~g 149 (228)
T cd00757 97 NERL-DAENAEELIAGYDLVLDCTDNFATRYLINDACVKLGK-PLVSGAVLGFEG 149 (228)
T ss_pred ccee-CHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence 5555 35667788999999998831 126677888886 467766555443
No 478
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=94.92 E-value=0.12 Score=44.45 Aligned_cols=72 Identities=11% Similarity=0.009 Sum_probs=48.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC----HHHHHHhh--cCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN----KKFLKTAL--RGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D----~~sL~~AL--~GvDaVIh~ 170 (209)
+..+|||+||+|.+|+.+++.+...|.+|.++++++++.......+++.+ .+..+ ...+.+.. +++|.+|.+
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 217 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIIL-IRYPDEEGFAPKVKKLTGEKGVNLVLDC 217 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEE-EecCChhHHHHHHHHHhCCCCceEEEEC
Confidence 46799999999999999999999999998888887765432211122211 12222 22344444 468999987
No 479
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=94.92 E-value=0.064 Score=47.14 Aligned_cols=63 Identities=13% Similarity=0.101 Sum_probs=45.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC----CcEEEEEeCCc-chhhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKR-NAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G----~~VraLvR~~~-~a~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.+.| +|.+|+.+++.|+++| ++|.+..|+++ +...... .+++.. . +..++++.+|.||.+
T Consensus 4 mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~----~---~~~e~~~~aDvVila 72 (279)
T PRK07679 4 QNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGT----H---NKKELLTDANILFLA 72 (279)
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEe----C---CHHHHHhcCCEEEEE
Confidence 5899998 9999999999999998 78999888764 3332211 123322 2 234567889999987
No 480
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=94.92 E-value=0.058 Score=49.38 Aligned_cols=70 Identities=13% Similarity=0.066 Sum_probs=44.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-------cEEEEEeCC--cchh----hhcCCceEEEEccCCCHHHHHHhhcCCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDK--RNAM----ESFGTYVESMAGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~-------~VraLvR~~--~~a~----~~~~~~vevv~GDl~D~~sL~~AL~GvDa 166 (209)
.+|.|+||+|++|++++..|+.++. +++.+++++ +++. .+.... .....++.-.....++++++|.
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~-~~~~~~~~i~~~~~~~~~daDv 82 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCA-FPLLAGVVATTDPEEAFKDVDA 82 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcc-ccccCCcEEecChHHHhCCCCE
Confidence 4899999999999999999988874 788888754 2221 111100 0000111001223578999999
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
||.+
T Consensus 83 VVit 86 (323)
T TIGR01759 83 ALLV 86 (323)
T ss_pred EEEe
Confidence 9998
No 481
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=94.92 E-value=0.16 Score=44.43 Aligned_cols=69 Identities=13% Similarity=0.010 Sum_probs=43.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEc--cC----CCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAG--DA----SNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~G--Dl----~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|+|.| .|.+|..++..|.++|++|..+.| +++.......++.+... +. .-.....++.+.+|.||.+
T Consensus 1 mkI~IiG-~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vila 75 (305)
T PRK12921 1 MRIAVVG-AGAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILA 75 (305)
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCCCceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEE
Confidence 4789995 599999999999999999999999 54433222122222111 11 0011233455889999887
No 482
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.91 E-value=0.47 Score=41.55 Aligned_cols=96 Identities=10% Similarity=0.057 Sum_probs=63.4
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCc-------------------chh------hhcCCc--eEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------NAM------ESFGTY--VESM 147 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~-------------------~a~------~~~~~~--vevv 147 (209)
...+.+|+|.|+ |-+|+.+++.|...|. ++++++.+.- ++. ....+. ++.+
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~ 107 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI 107 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 456779999999 9999999999999996 5666653321 110 111233 3445
Q ss_pred EccCCCHHHHHHhhcCCcEEEEcCh-----hHHHHHHHhCCCCEEEEecccc
Q 028418 148 AGDASNKKFLKTALRGVRSIICPSE-----GFISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a~-----g~ll~AA~~aGVkriV~vSS~~ 194 (209)
...++ ++.+.+.++++|.||.+.+ -.+-++|++.++. +|+.++.+
T Consensus 108 ~~~i~-~~~~~~~~~~~DiVi~~~D~~~~r~~ln~~~~~~~ip-~v~~~~~g 157 (245)
T PRK05690 108 NARLD-DDELAALIAGHDLVLDCTDNVATRNQLNRACFAAKKP-LVSGAAIR 157 (245)
T ss_pred eccCC-HHHHHHHHhcCCEEEecCCCHHHHHHHHHHHHHhCCE-EEEeeecc
Confidence 55554 4567778999999998832 1266778888855 66655543
No 483
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=94.90 E-value=0.097 Score=44.36 Aligned_cols=73 Identities=16% Similarity=0.175 Sum_probs=48.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCce-EEEEccCCC-HHHHHHhhc--CCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASN-KKFLKTALR--GVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~v-evv~GDl~D-~~sL~~AL~--GvDaVIh~ 170 (209)
+..+|+|+|++|.+|+.+++.+...|.+|.+++++..+.......++ .++..+..+ ...+.+... ++|.+|.+
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 220 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDP 220 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEEC
Confidence 45699999999999999999999999999999987755432211122 222222212 122333343 68999987
No 484
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.89 E-value=0.097 Score=47.56 Aligned_cols=64 Identities=16% Similarity=0.136 Sum_probs=48.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++|.|.| .|.||+.+++.|...|.+|.+..|.++... +++.+ ...+++.++++.+|.|+++
T Consensus 134 l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~----~~~~~l~e~l~~aDvvv~~ 197 (312)
T PRK15469 134 REDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSF----AGREELSAFLSQTRVLINL 197 (312)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceee----cccccHHHHHhcCCEEEEC
Confidence 3456888886 899999999999999999999987654321 12221 2355789999999999876
No 485
>PRK06444 prephenate dehydrogenase; Provisional
Probab=94.88 E-value=0.052 Score=46.55 Aligned_cols=28 Identities=7% Similarity=0.075 Sum_probs=26.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIK 127 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~Vr 127 (209)
++|.|.||+|.+|+.+++.|.+.|+.|.
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence 4899999999999999999999999986
No 486
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=94.85 E-value=0.16 Score=46.51 Aligned_cols=91 Identities=10% Similarity=0.049 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-hh-H
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-EG-F 174 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~g-~ 174 (209)
+.++|+|.|+ |.+|...++.+...|.+|.+++++.++ .......+++.+. |..+.+.+.+...++|.||-+. .. .
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i-~~~~~~~v~~~~~~~D~vid~~G~~~~ 255 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFL-VTTDSQKMKEAVGTMDFIIDTVSAEHA 255 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEE-cCcCHHHHHHhhCCCcEEEECCCcHHH
Confidence 5789999986 999999999899999999998876543 2111112233322 3344556666667899999872 11 2
Q ss_pred ---HHHHHHhCCCCEEEEecc
Q 028418 175 ---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS 192 (209)
.++..+.. .++|.++.
T Consensus 256 ~~~~~~~l~~~--G~iv~vG~ 274 (375)
T PLN02178 256 LLPLFSLLKVS--GKLVALGL 274 (375)
T ss_pred HHHHHHhhcCC--CEEEEEcc
Confidence 33333332 57887764
No 487
>PRK05442 malate dehydrogenase; Provisional
Probab=94.82 E-value=0.084 Score=48.41 Aligned_cols=65 Identities=14% Similarity=0.008 Sum_probs=44.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC-------cEEEEEeCCc--chh----hhc------CCceEEEEccCCCHHHHHH
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKR--NAM----ESF------GTYVESMAGDASNKKFLKT 159 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~-------~VraLvR~~~--~a~----~~~------~~~vevv~GDl~D~~sL~~ 159 (209)
..+|.|+||+|++|++++..|+..+. ++..+++++. ++. .+. ..++.+. ....+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~-------~~~y~ 76 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT-------DDPNV 76 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe-------cChHH
Confidence 34899999999999999998887664 6888877442 221 111 0122221 12357
Q ss_pred hhcCCcEEEEc
Q 028418 160 ALRGVRSIICP 170 (209)
Q Consensus 160 AL~GvDaVIh~ 170 (209)
+++|+|.||.+
T Consensus 77 ~~~daDiVVit 87 (326)
T PRK05442 77 AFKDADVALLV 87 (326)
T ss_pred HhCCCCEEEEe
Confidence 89999999988
No 488
>PLN02827 Alcohol dehydrogenase-like
Probab=94.81 E-value=0.28 Score=44.76 Aligned_cols=92 Identities=13% Similarity=0.092 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchhhhcCCceEEEEccCCCH-----HHHHHhhc-CCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMESFGTYVESMAGDASNK-----KFLKTALR-GVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~~~~~~~vevv~GDl~D~-----~sL~~AL~-GvDaVIh~ 170 (209)
+.++|||+|+ |.+|..+++.+...|.. |.+..+++++.......+++.+ .|..++ +.+.+... |+|.||.+
T Consensus 193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~-i~~~~~~~~~~~~v~~~~~~g~d~vid~ 270 (378)
T PLN02827 193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDF-INPNDLSEPIQQVIKRMTGGGADYSFEC 270 (378)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEE-EcccccchHHHHHHHHHhCCCCCEEEEC
Confidence 4679999985 99999999988889985 6666666655432212223322 233321 22333332 79999987
Q ss_pred -C-hhH---HHHHHHhCCCCEEEEecc
Q 028418 171 -S-EGF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 171 -a-~g~---ll~AA~~aGVkriV~vSS 192 (209)
. ... .++.++ .|-.++|.++.
T Consensus 271 ~G~~~~~~~~l~~l~-~g~G~iv~~G~ 296 (378)
T PLN02827 271 VGDTGIATTALQSCS-DGWGLTVTLGV 296 (378)
T ss_pred CCChHHHHHHHHhhc-cCCCEEEEECC
Confidence 2 223 233332 33357777654
No 489
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=94.79 E-value=0.14 Score=44.04 Aligned_cols=95 Identities=15% Similarity=0.111 Sum_probs=57.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCce-EEEEccC-CCHHHHHHhh--cCCcEEEEcC-
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDA-SNKKFLKTAL--RGVRSIICPS- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~v-evv~GDl-~D~~sL~~AL--~GvDaVIh~a- 171 (209)
.+..+|||.|++|.+|..+++.+...|.+|.+++++.++.......++ +++..+- .....+.+.. +++|.|+.+.
T Consensus 137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 216 (323)
T cd05282 137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVG 216 (323)
T ss_pred CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCC
Confidence 356799999999999999999999999999999987765432211122 2222111 1122233343 4789999872
Q ss_pred -hhH--HHHHHHhCCCCEEEEeccc
Q 028418 172 -EGF--ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 -~g~--ll~AA~~aGVkriV~vSS~ 193 (209)
... .++..+.. .++|.++..
T Consensus 217 ~~~~~~~~~~l~~~--g~~v~~g~~ 239 (323)
T cd05282 217 GESATRLARSLRPG--GTLVNYGLL 239 (323)
T ss_pred CHHHHHHHHhhCCC--CEEEEEccC
Confidence 111 23332222 467776544
No 490
>PRK08818 prephenate dehydrogenase; Provisional
Probab=94.76 E-value=0.077 Score=49.65 Aligned_cols=55 Identities=13% Similarity=0.113 Sum_probs=41.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+++|+|.|.+|.||+.+++.|.+. +++|++.+|+.+. ..+ ..++++++|.||.+
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~---------------~~~---~~~~v~~aDlVila 58 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG---------------SLD---PATLLQRADVLIFS 58 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc---------------cCC---HHHHhcCCCEEEEe
Confidence 4679999999999999999999875 8888888763111 112 34567888888877
No 491
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=94.76 E-value=0.19 Score=45.37 Aligned_cols=91 Identities=11% Similarity=0.058 Sum_probs=56.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--hhH
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICPS--EGF 174 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a--~g~ 174 (209)
+.++|||.|+ |.||..+++.+...|.+|.+++.+.++.... ...+++.+. |..+++.+.+...++|.||-+. ..+
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi-~~~~~~~~~~~~~~~D~vid~~g~~~~ 260 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFL-VSTDPEKMKAAIGTMDYIIDTVSAVHA 260 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEE-cCCCHHHHHhhcCCCCEEEECCCCHHH
Confidence 5679999775 9999999998889999998887665442211 112233222 3344456666666899999872 222
Q ss_pred ---HHHHHHhCCCCEEEEecc
Q 028418 175 ---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS 192 (209)
.++..+.. .++|.++.
T Consensus 261 ~~~~~~~l~~~--G~iv~vG~ 279 (360)
T PLN02586 261 LGPLLGLLKVN--GKLITLGL 279 (360)
T ss_pred HHHHHHHhcCC--cEEEEeCC
Confidence 33333333 46776653
No 492
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=94.76 E-value=0.11 Score=49.46 Aligned_cols=65 Identities=18% Similarity=0.140 Sum_probs=49.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+.++|+|.|+ |.||+.++..|...|.+|.+..+++.+.......+++.+ + +.++++++|.||.+
T Consensus 200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-----~---~~e~v~~aDVVI~a 264 (413)
T cd00401 200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-----T---MEEAVKEGDIFVTT 264 (413)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-----c---HHHHHcCCCEEEEC
Confidence 46779999985 689999999999999999998888876544333344433 1 24677899999987
No 493
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=94.75 E-value=0.058 Score=49.02 Aligned_cols=62 Identities=10% Similarity=0.017 Sum_probs=44.3
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-hcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-SFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+|.+.| .|..|..++..|+++||+|++..|+++++.. ....+++. .++..++.+++|.||.+
T Consensus 2 kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~-------a~s~~eaa~~aDvVitm 64 (286)
T COG2084 2 KIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATV-------AASPAEAAAEADVVITM 64 (286)
T ss_pred eEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcc-------cCCHHHHHHhCCEEEEe
Confidence 455554 8999999999999999999999999988432 22222322 12336677778888766
No 494
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=94.74 E-value=0.13 Score=43.48 Aligned_cols=93 Identities=17% Similarity=0.168 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhh--cCCcEEEEcCh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL--RGVRSIICPSE 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL--~GvDaVIh~a~ 172 (209)
+..+++|+|++|.+|..+++.+...|.+|.++.+++++.......++..+ .+..+++ .+.+.. +++|.++.+..
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ 217 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIA-INYREEDFVEVVKAETGGKGVDVILDIVG 217 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEE-EecCchhHHHHHHHHcCCCCeEEEEECCc
Confidence 46799999999999999999999999999999887765432211112211 1222222 233333 36899998732
Q ss_pred hH----HHHHHHhCCCCEEEEeccc
Q 028418 173 GF----ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 173 g~----ll~AA~~aGVkriV~vSS~ 193 (209)
+. .++..... .++|.++..
T Consensus 218 ~~~~~~~~~~l~~~--g~~v~~g~~ 240 (325)
T TIGR02824 218 GSYLNRNIKALALD--GRIVQIGFQ 240 (325)
T ss_pred hHHHHHHHHhhccC--cEEEEEecC
Confidence 21 23333223 477776543
No 495
>PRK06545 prephenate dehydrogenase; Validated
Probab=94.74 E-value=0.054 Score=49.64 Aligned_cols=66 Identities=15% Similarity=0.065 Sum_probs=46.4
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+|.|.| +|.+|+.+++.|..+|++|.+..+++.........+..++. + ....+.++++.+|.||.+
T Consensus 2 ~I~iIG-~GliG~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~-~--~~~~~~~~~~~aDlVila 67 (359)
T PRK06545 2 TVLIVG-LGLIGGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVID-E--LAADLQRAAAEADLIVLA 67 (359)
T ss_pred eEEEEE-eCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCc-c--cccCHHHHhcCCCEEEEe
Confidence 678885 69999999999999999999999988764322111111110 1 113466788999999987
No 496
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=94.73 E-value=0.12 Score=46.03 Aligned_cols=91 Identities=11% Similarity=0.034 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCH--HHHHHhhcCCcEEEEcC--h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK--KFLKTALRGVRSIICPS--E 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~--~sL~~AL~GvDaVIh~a--~ 172 (209)
+.++|||+|+ |.+|...++.+...|. +|.++++++++......-+++.+ .|..+. ..+.+...++|.||-+. .
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~~g~~D~vid~~G~~ 246 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKL-VNPQNDDLDHYKAEKGYFDVSFEVSGHP 246 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEE-ecCCcccHHHHhccCCCCCEEEECCCCH
Confidence 5679999986 9999999988888998 58888888766543222233332 133332 22222223489999872 2
Q ss_pred hH---HHHHHHhCCCCEEEEecc
Q 028418 173 GF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 g~---ll~AA~~aGVkriV~vSS 192 (209)
.+ .+++.+.. .++|.++.
T Consensus 247 ~~~~~~~~~l~~~--G~iv~~G~ 267 (343)
T PRK09880 247 SSINTCLEVTRAK--GVMVQVGM 267 (343)
T ss_pred HHHHHHHHHhhcC--CEEEEEcc
Confidence 22 34444433 46777653
No 497
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=94.71 E-value=0.096 Score=48.70 Aligned_cols=68 Identities=12% Similarity=-0.016 Sum_probs=49.9
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+....++|.|.|- |.+|+.+++.|...|++|++..|...........++++ .++.++++.+|.|+.+
T Consensus 11 ~~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v--------~sl~Eaak~ADVV~ll 78 (335)
T PRK13403 11 VELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEV--------MSVSEAVRTAQVVQML 78 (335)
T ss_pred hhhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEE--------CCHHHHHhcCCEEEEe
Confidence 35667789999985 99999999999999999999887533322111123332 1578999999999866
No 498
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=94.71 E-value=0.088 Score=48.42 Aligned_cols=73 Identities=12% Similarity=0.101 Sum_probs=46.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC---cEEEEEeCCcchhhh---cCC-----ceEEEEccCCC-H---HHHHHhhc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMES---FGT-----YVESMAGDASN-K---KFLKTALR 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~---~VraLvR~~~~a~~~---~~~-----~vevv~GDl~D-~---~sL~~AL~ 162 (209)
+..+|||.||+|.+|...++.+...|. +|.++++++++.... ++. +++....|..+ . +.+.+...
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~ 254 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG 254 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC
Confidence 457999999999999999887777664 798888877654322 111 23322234332 1 22333333
Q ss_pred --CCcEEEEc
Q 028418 163 --GVRSIICP 170 (209)
Q Consensus 163 --GvDaVIh~ 170 (209)
|+|.||.+
T Consensus 255 g~g~D~vid~ 264 (410)
T cd08238 255 GQGFDDVFVF 264 (410)
T ss_pred CCCCCEEEEc
Confidence 68999986
No 499
>PLN02928 oxidoreductase family protein
Probab=94.70 E-value=0.099 Score=48.12 Aligned_cols=74 Identities=9% Similarity=0.035 Sum_probs=50.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-c---CCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-F---GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-~---~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
....++|+|.|- |.||+.+++.|...|.+|.+..|+..+.... + ...++.+........++.++++.+|.|+.+
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 355779999986 9999999999999999999998764322111 0 011111111112456799999999999865
No 500
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=94.69 E-value=0.049 Score=48.50 Aligned_cols=70 Identities=7% Similarity=-0.022 Sum_probs=48.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcC---CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG---TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~---~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..+++||.|| |..++.++..|...|. +|.++.|+++++..+.. ....+.. +...+.+..++..+|.||++
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVST 197 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEEC
Confidence 4568999987 8899999999999996 69999999887754421 1111111 22223455667889999987
Done!