Your job contains 1 sequence.
>028419
MAQPVTTPCAHNFCKSCLEEAFSGKSFVRERSRGGRALRSQKTIMKCPSCTTDISDFLKD
PQVNRELMEVIESLKQKTEEDDELAEESNDEGTDASEGISDLVPESSKSSGKHHEETIVT
GCSHNPQVKCTPERASKRKKVDVEDSLGRNNDGEEATIAAEKPDDGLDVDSEANLKVGSK
DTKAEEEMEEENDSPASPLLMPSDDQDSA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028419
(209 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2009420 - symbol:VIM1 "AT1G57820" species:3702... 318 9.5e-28 1
TAIR|locus:2013840 - symbol:VIM2 "VARIANT IN METHYLATION ... 312 3.8e-27 1
TAIR|locus:2009425 - symbol:VIM5 "VARIANT IN METHYLATION ... 312 4.5e-27 1
TAIR|locus:2164835 - symbol:VIM3 "VARIANT IN METHYLATION ... 309 7.9e-27 1
TAIR|locus:2013800 - symbol:VIM4 "VARIANT IN METHYLATION ... 306 1.7e-26 1
UNIPROTKB|C9IZE0 - symbol:TRIM59 "Tripartite motif-contai... 92 0.00026 1
UNIPROTKB|C9J9F0 - symbol:TRIM59 "Tripartite motif-contai... 92 0.00026 1
UNIPROTKB|J3KNZ3 - symbol:TRIM17 "E3 ubiquitin-protein li... 102 0.00063 1
UNIPROTKB|E1B964 - symbol:LOC100849413 "Uncharacterized p... 87 0.00086 2
UNIPROTKB|I3LT33 - symbol:LONRF1 "Uncharacterized protein... 87 0.00090 2
UNIPROTKB|H7C5V9 - symbol:LONRF1 "LON peptidase N-termina... 87 0.00092 2
>TAIR|locus:2009420 [details] [associations]
symbol:VIM1 "AT1G57820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IPI] [GO:0008327 "methyl-CpG binding" evidence=IDA]
[GO:0010428 "methyl-CpNpG binding" evidence=IDA] [GO:0010429
"methyl-CpNpN binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0010369 "chromocenter" evidence=IDA]
[GO:0010385 "double-stranded methylated DNA binding" evidence=IDA]
[GO:0031508 "centromeric heterochromatin assembly" evidence=IMP]
[GO:0032776 "DNA methylation on cytosine" evidence=IMP] [GO:0006325
"chromatin organization" evidence=IPI] [GO:0051301 "cell division"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0090309 "positive regulation of
methylation-dependent chromatin silencing" evidence=IMP]
[GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0000280 "nuclear
division" evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0000911 "cytokinesis by
cell plate formation" evidence=RCA] [GO:0006260 "DNA replication"
evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0007000
"nucleolus organization" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0009555 "pollen development"
evidence=RCA] [GO:0016444 "somatic cell DNA recombination"
evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0051726 "regulation of cell cycle"
evidence=RCA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 PROSITE:PS51292 SMART:SM00184
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00518
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0051301
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 InterPro:IPR017907
GO:GO:0010369 HSSP:Q99728 GO:GO:0031508 GO:GO:0010424 GO:GO:0008327
EMBL:AC079732 GO:GO:0010385 eggNOG:COG3440 HOGENOM:HOG000240700
KO:K10638 ProtClustDB:CLSN2679702 GO:GO:0010428 GO:GO:0010429
GO:GO:0090309 Gene3D:2.30.280.10 EMBL:AY065438 EMBL:AY117235
IPI:IPI00542643 IPI:IPI00544062 PIR:E96612 RefSeq:NP_176092.2
RefSeq:NP_974045.1 UniGene:At.28484 ProteinModelPortal:Q8VYZ0
SMR:Q8VYZ0 STRING:Q8VYZ0 EnsemblPlants:AT1G57820.1 GeneID:842157
KEGG:ath:AT1G57820 TAIR:At1g57820 InParanoid:Q8VYZ0 OMA:RSAYAPE
PhylomeDB:Q8VYZ0 Genevestigator:Q8VYZ0 Uniprot:Q8VYZ0
Length = 645
Score = 318 (117.0 bits), Expect = 9.5e-28, P = 9.5e-28
Identities = 59/89 (66%), Positives = 70/89 (78%)
Query: 4 PVTTPCAHNFCKSCLEEAFSGKSFVRERSRGGRALRSQKTIMKCPSCTTDISDFLKDPQV 63
PVTTPCAHNFCK+CLE F+GK+ VRERS GGR LRS+K ++ CP C TDISDFL++PQV
Sbjct: 528 PVTTPCAHNFCKACLEAKFAGKTLVRERSTGGRTLRSRKNVLNCPCCPTDISDFLQNPQV 587
Query: 64 NRELMEVIESLKQKTEEDDELAEESNDEG 92
NRE+ EVIE LK T+E+D E DEG
Sbjct: 588 NREVAEVIEKLK--TQEEDTAELEDEDEG 614
>TAIR|locus:2013840 [details] [associations]
symbol:VIM2 "VARIANT IN METHYLATION 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0042393
"histone binding" evidence=IEA] [GO:0032776 "DNA methylation on
cytosine" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0090309 "positive regulation of
methylation-dependent chromatin silencing" evidence=IMP]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR001965
InterPro:IPR003105 Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS51015 PROSITE:PS51292 SMART:SM00184 SMART:SM00249
SMART:SM00466 UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AC026480 GO:GO:0016568 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 GO:GO:0042393
InterPro:IPR017907 GO:GO:0008327 eggNOG:COG3440
HOGENOM:HOG000240700 KO:K10638 ProtClustDB:CLSN2679702
GO:GO:0010428 GO:GO:0010429 GO:GO:0090309 Gene3D:2.30.280.10
UniGene:At.35808 UniGene:At.48345 EMBL:BT010568 EMBL:AK175694
EMBL:AK175887 EMBL:AK176012 IPI:IPI00541483 PIR:A96685
RefSeq:NP_176779.2 ProteinModelPortal:Q680I0 SMR:Q680I0
STRING:Q680I0 EnsemblPlants:AT1G66050.1 GeneID:842919
KEGG:ath:AT1G66050 TAIR:At1g66050 InParanoid:Q680I0
PhylomeDB:Q680I0 Genevestigator:Q680I0 Uniprot:Q680I0
Length = 623
Score = 312 (114.9 bits), Expect = 3.8e-27, P = 3.8e-27
Identities = 59/100 (59%), Positives = 80/100 (80%)
Query: 1 MAQPVTTPCAHNFCKSCLEEAFSGKSFVRERSRGGRALRSQKTIMKCPSCTTDISDFLKD 60
++ PVTTPCAHNFCK+CLE F+G + +R+RS G R LR++K IM CP CTTD+S+FL++
Sbjct: 505 LSLPVTTPCAHNFCKACLEAKFAGITQLRDRSNGVRKLRAKKNIMTCPCCTTDLSEFLQN 564
Query: 61 PQVNRELMEVIESLKQKTEEDDELAEESN---DEGTDASE 97
PQVNRE+ME+IE+ K K+EE+ E+AE SN +EG + SE
Sbjct: 565 PQVNREMMEIIENFK-KSEEEAEVAESSNISEEEGEEESE 603
>TAIR|locus:2009425 [details] [associations]
symbol:VIM5 "VARIANT IN METHYLATION 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0042393
"histone binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR003105 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00249
UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0042393 InterPro:IPR017907
GO:GO:0010424 GO:GO:0008327 EMBL:AC079732 eggNOG:COG3440
HOGENOM:HOG000240700 KO:K10638 ProtClustDB:CLSN2679702
GO:GO:0010428 GO:GO:0010429 Gene3D:2.30.280.10 IPI:IPI00546002
PIR:D96612 RefSeq:NP_176091.2 UniGene:At.36964
ProteinModelPortal:Q9FVS2 SMR:Q9FVS2 PRIDE:Q9FVS2
EnsemblPlants:AT1G57800.1 GeneID:842155 KEGG:ath:AT1G57800
TAIR:At1g57800 InParanoid:Q9FVS2 OMA:GTSHEEE PhylomeDB:Q9FVS2
Genevestigator:Q9FVS2 Uniprot:Q9FVS2
Length = 660
Score = 312 (114.9 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 57/98 (58%), Positives = 74/98 (75%)
Query: 1 MAQPVTTPCAHNFCKSCLEEAFSGKSFVRERSRGGRALRSQKTIMKCPSCTTDISDFLKD 60
M PVTTPCAHNFCK+CLE F+G + VRER GGR LRSQK++MKCP C TDI++F+++
Sbjct: 535 MTNPVTTPCAHNFCKACLESKFAGTALVRERGSGGRKLRSQKSVMKCPCCPTDIAEFVQN 594
Query: 61 PQVNRELMEVIESLKQKTEEDDELA-EESNDEGTDASE 97
PQVNRE+ EVIE LK++ EE++ + +E GT E
Sbjct: 595 PQVNREVAEVIEKLKKQEEEENAKSLDEGQCSGTSHEE 632
>TAIR|locus:2164835 [details] [associations]
symbol:VIM3 "VARIANT IN METHYLATION 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0042393
"histone binding" evidence=IEA] [GO:0008327 "methyl-CpG binding"
evidence=IDA] [GO:0010428 "methyl-CpNpG binding" evidence=IDA]
[GO:0010429 "methyl-CpNpN binding" evidence=IDA] [GO:0032776 "DNA
methylation on cytosine" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0090309 "positive regulation of
methylation-dependent chromatin silencing" evidence=IMP]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR003105
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0010228
GO:GO:0004842 GO:GO:0042393 InterPro:IPR017907 HSSP:P38398
EMBL:AB012243 GO:GO:0010424 GO:GO:0008327 EMBL:BT010573
EMBL:AK176778 EMBL:AK221256 IPI:IPI00535078 RefSeq:NP_198771.1
UniGene:At.30336 ProteinModelPortal:Q9FKA7 SMR:Q9FKA7 STRING:Q9FKA7
PRIDE:Q9FKA7 EnsemblPlants:AT5G39550.1 GeneID:833951
KEGG:ath:AT5G39550 TAIR:At5g39550 eggNOG:COG3440
HOGENOM:HOG000240700 InParanoid:Q9FKA7 KO:K10638 OMA:TKCSVEA
PhylomeDB:Q9FKA7 ProtClustDB:CLSN2679702 Genevestigator:Q9FKA7
GO:GO:0010428 GO:GO:0010429 GO:GO:0090309 Gene3D:2.30.280.10
Uniprot:Q9FKA7
Length = 617
Score = 309 (113.8 bits), Expect = 7.9e-27, P = 7.9e-27
Identities = 56/100 (56%), Positives = 77/100 (77%)
Query: 1 MAQPVTTPCAHNFCKSCLEEAFSGKSFVRERSRGGRALRSQKTIMKCPSCTTDISDFLKD 60
++ PVTTPCAHNFCK+CLE F+G + +RERS GGR LR++K IM CP CTTD+S+FL++
Sbjct: 502 LSLPVTTPCAHNFCKACLEAKFAGITQLRERSNGGRKLRAKKNIMTCPCCTTDLSEFLQN 561
Query: 61 PQVNRELMEVIESLKQKTEEDD-ELAEESNDEGTDASEGI 99
PQVNRE+ME+IE+ K+ EE D ++EE +E ++ I
Sbjct: 562 PQVNREMMEIIENFKKSEEEADASISEEEEEESEPPTKKI 601
>TAIR|locus:2013800 [details] [associations]
symbol:VIM4 "VARIANT IN METHYLATION 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0042393
"histone binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR001965 InterPro:IPR003105
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
PROSITE:PS51292 SMART:SM00184 SMART:SM00249 SMART:SM00466
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC026480 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0042393 InterPro:IPR017907
HSSP:P38398 GO:GO:0010424 GO:GO:0008327 eggNOG:COG3440
HOGENOM:HOG000240700 KO:K10638 ProtClustDB:CLSN2679702
GO:GO:0010428 GO:GO:0010429 Gene3D:2.30.280.10 IPI:IPI00535924
PIR:H96684 RefSeq:NP_176778.1 UniGene:At.35808 UniGene:At.48345
ProteinModelPortal:Q9C8E1 SMR:Q9C8E1 STRING:Q9C8E1
EnsemblPlants:AT1G66040.1 GeneID:842917 KEGG:ath:AT1G66040
TAIR:At1g66040 InParanoid:Q9C8E1 OMA:RMESPSW PhylomeDB:Q9C8E1
Genevestigator:Q9C8E1 Uniprot:Q9C8E1
Length = 622
Score = 306 (112.8 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 58/99 (58%), Positives = 79/99 (79%)
Query: 1 MAQPVTTPCAHNFCKSCLEEAFSGKSFVRERSRGGRALRSQKTIMKCPSCTTDISDFLKD 60
++ PVTTPCAHNFCK+CLE F+G + +R+RS G R LR++K IM CP CTTD+S+FL++
Sbjct: 505 LSLPVTTPCAHNFCKACLEAKFAGITQLRDRSNGVRKLRAKKNIMTCPCCTTDLSEFLQN 564
Query: 61 PQVNRELMEVIESLKQKTEEDDELAEESN--DEGTDASE 97
PQVNRE+ME+IE+ K K+EE+ E+AE SN +E + SE
Sbjct: 565 PQVNREMMEIIENFK-KSEEEAEVAESSNISEEEEEESE 602
>UNIPROTKB|C9IZE0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 OrthoDB:EOG4K3KX1 HGNC:HGNC:30834
HOGENOM:HOG000199013 IPI:IPI00945336 ProteinModelPortal:C9IZE0
SMR:C9IZE0 STRING:C9IZE0 Ensembl:ENST00000471155
ArrayExpress:C9IZE0 Bgee:C9IZE0 Uniprot:C9IZE0
Length = 114
Score = 92 (37.4 bits), Expect = 0.00026, P = 0.00026
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 4 PVTTPCAHNFCKSCLEEAF--SGKSFVRERSRGGRALRSQKTIMKCPSCT--TDISDF-L 58
P PC+H FC++CLE SG ++ R LR +KCP+C T+I+ +
Sbjct: 20 PRVLPCSHTFCRNCLENILQASGNFYI------WRPLRIP---LKCPNCRSITEIAPTGI 70
Query: 59 KDPQVNRELMEVIESLKQKTEED 81
+ VN L +IE +Q+ D
Sbjct: 71 ESLPVNFALRAIIEKYQQEDHPD 93
>UNIPROTKB|C9J9F0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 HGNC:HGNC:30834 HOGENOM:HOG000199013 IPI:IPI00945495
ProteinModelPortal:C9J9F0 SMR:C9J9F0 STRING:C9J9F0
Ensembl:ENST00000494486 ArrayExpress:C9J9F0 Bgee:C9J9F0
Uniprot:C9J9F0
Length = 111
Score = 92 (37.4 bits), Expect = 0.00026, P = 0.00026
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 4 PVTTPCAHNFCKSCLEEAF--SGKSFVRERSRGGRALRSQKTIMKCPSCT--TDISDF-L 58
P PC+H FC++CLE SG ++ R LR +KCP+C T+I+ +
Sbjct: 20 PRVLPCSHTFCRNCLENILQASGNFYI------WRPLRIP---LKCPNCRSITEIAPTGI 70
Query: 59 KDPQVNRELMEVIESLKQKTEED 81
+ VN L +IE +Q+ D
Sbjct: 71 ESLPVNFALRAIIEKYQQEDHPD 93
>UNIPROTKB|J3KNZ3 [details] [associations]
symbol:TRIM17 "E3 ubiquitin-protein ligase TRIM17"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL139288 EMBL:AL670729 HGNC:HGNC:13430
Ensembl:ENST00000355586 Uniprot:J3KNZ3
Length = 175
Score = 102 (41.0 bits), Expect = 0.00063, P = 0.00063
Identities = 26/88 (29%), Positives = 47/88 (53%)
Query: 4 PVTTPCAHNFCKSCLEEAFSGKSFVRERSRGGRALRSQKTIMKCPSCTTDISDFLKDPQV 63
PV T C HNFC++C++ ++ E++RG + R +K CP C ++S ++
Sbjct: 26 PVMTTCGHNFCRACIQLSW-------EKARGKKGRRKRKGSFPCPECR-EMSP-QRNLLP 76
Query: 64 NRELMEVIESLKQKTE-EDDELAEESND 90
NR L +V E +Q + +L +E ++
Sbjct: 77 NRLLTKVAEMAQQHPGLQKQDLCQEHHE 104
>UNIPROTKB|E1B964 [details] [associations]
symbol:LOC100849413 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
CTD:91694 OMA:GHSYCRR GeneTree:ENSGT00440000033329
EMBL:DAAA02060368 IPI:IPI00703913 RefSeq:XP_002698738.1
ProteinModelPortal:E1B964 Ensembl:ENSBTAT00000012816 GeneID:504489
KEGG:bta:504489 NextBio:20866687 Uniprot:E1B964
Length = 638
Score = 87 (35.7 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 13/17 (76%), Positives = 16/17 (94%)
Query: 3 QPVTTPCAHNFCKSCLE 19
+PVTTPC H+FCK+CLE
Sbjct: 353 EPVTTPCGHSFCKNCLE 369
Score = 65 (27.9 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 34 GGRALRSQKTIMKCPSCTTDISDFLKDPQVNRELMEVIESLKQ 76
GG+ R K MK CT DI ++L+D +V E + IE+L+Q
Sbjct: 508 GGKRFRVLKRGMKDGYCTADI-EYLEDIKVENE--DEIENLRQ 547
>UNIPROTKB|I3LT33 [details] [associations]
symbol:LONRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GO:GO:0004176 GeneTree:ENSGT00440000033329 EMBL:CU638828
Ensembl:ENSSSCT00000027883 Uniprot:I3LT33
Length = 717
Score = 87 (35.7 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 13/17 (76%), Positives = 16/17 (94%)
Query: 3 QPVTTPCAHNFCKSCLE 19
+PVTTPC H+FCK+CLE
Sbjct: 432 EPVTTPCGHSFCKNCLE 448
Score = 66 (28.3 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 34 GGRALRSQKTIMKCPSCTTDISDFLKDPQVNRELMEVIESLKQ 76
GG+ R K MK CT DI ++L+D +V E + IE+L+Q
Sbjct: 587 GGKRFRVLKRGMKDGYCTADI-EYLEDVKVENE--DEIENLRQ 626
>UNIPROTKB|H7C5V9 [details] [associations]
symbol:LONRF1 "LON peptidase N-terminal domain and RING
finger protein 1" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111 Pfam:PF02190
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
EMBL:AC123777 HGNC:HGNC:26302 Ensembl:ENST00000524526 Bgee:H7C5V9
Uniprot:H7C5V9
Length = 376
Score = 87 (35.7 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 13/17 (76%), Positives = 16/17 (94%)
Query: 3 QPVTTPCAHNFCKSCLE 19
+PVTTPC H+FCK+CLE
Sbjct: 91 EPVTTPCGHSFCKNCLE 107
Score = 59 (25.8 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 34 GGRALRSQKTIMKCPSCTTDISDFLKDPQVNRELMEVIESLKQ 76
GG+ R K MK CT DI ++L+D +V E + I++L++
Sbjct: 246 GGKRFRVLKRGMKDGYCTADI-EYLEDVKVENE--DEIKNLRE 285
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.307 0.126 0.353 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 209 190 0.00091 110 3 11 23 0.43 33
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 543 (58 KB)
Total size of DFA: 142 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.86u 0.09s 23.95t Elapsed: 00:00:01
Total cpu time: 23.87u 0.09s 23.96t Elapsed: 00:00:01
Start: Mon May 20 17:10:07 2013 End: Mon May 20 17:10:08 2013