BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028420
(209 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 97/182 (53%)
Query: 7 GGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETL 66
G DT ++W+L ++ ++ +K Q ELDT IGRER+ SD +L YL+A + ET
Sbjct: 293 AGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETF 352
Query: 67 RLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTH 126
R P ++PH + D T+ G+++P +FVN ++ DP +WE P+EFRPERFLT
Sbjct: 353 RHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTAD 412
Query: 127 KDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDEPLDMSEGVG 186
+ + +++ FG G+R C G A EF+ P +D++ G
Sbjct: 413 GTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYG 472
Query: 187 LT 188
LT
Sbjct: 473 LT 474
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 120 bits (301), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 99/204 (48%), Gaps = 12/204 (5%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIG---RERQVNESDTKKLVYLQA 60
L +GGT+TT TL+WA+ +L+H ++ ++ Q+ELD +G +V D +L L A
Sbjct: 287 LFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNA 346
Query: 61 IVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
+ E LRL P PL++PH + +I GY +P G + N+ D VWE+P+EFRP+
Sbjct: 347 TIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPD 406
Query: 121 RFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATP--GDEP 178
RFL G N + FG G R C G S A F P G P
Sbjct: 407 RFLEP-------GANPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALP 459
Query: 179 LDMSEGVGLTNLKATPLQVLLTPR 202
+ NLK P QV L PR
Sbjct: 460 SLQPDPYCGVNLKVQPFQVRLQPR 483
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 98/185 (52%), Gaps = 1/185 (0%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L G DT ++W+L ++ + V +K Q+ELDT IGR R+ SD L Y++A +
Sbjct: 287 LFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFIL 346
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
ET R P ++PH + D ++ G+++P G +FVN +I D +W P+EF PERFL
Sbjct: 347 ETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFL 406
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDEPLDMSE 183
T ID + + ++I FG G+R C G + A EF+ P +DM+
Sbjct: 407 TPDGAID-KVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDMTP 465
Query: 184 GVGLT 188
GLT
Sbjct: 466 IYGLT 470
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 92/201 (45%), Gaps = 3/201 (1%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L G TT TL W L L++ H DV ++ Q E+D IG+ R+ D + Y A++
Sbjct: 280 LFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIH 339
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E R PL V H + D + G+ +P GT L N+ + +D VWEKP F PE FL
Sbjct: 340 EVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFL 399
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDEPLDMSE 183
V+ + F +PF +GRR C G A F F+ P +P
Sbjct: 400 DAQGHF-VKPEAF--LPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHH 456
Query: 184 GVGLTNLKATPLQVLLTPRLH 204
GV + +P ++ PR H
Sbjct: 457 GVFAFLVSPSPYELCAVPRHH 477
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 3/201 (1%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L G TT TL W L L++ H DV ++ Q E+D IG+ R+ D + Y A++
Sbjct: 280 LFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIH 339
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E R PL + H + D + G+ +P GT L N+ + +D VWEKP F PE FL
Sbjct: 340 EVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFL 399
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDEPLDMSE 183
V+ + F +PF +GRR C G A F F+ P +P
Sbjct: 400 DAQGHF-VKPEAF--LPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHH 456
Query: 184 GVGLTNLKATPLQVLLTPRLH 204
GV + +P ++ PR H
Sbjct: 457 GVFAFLVSPSPYELCAVPRHH 477
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Query: 7 GGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETL 66
G +TT + W L +L++ V KK +E+D ++G R SD +L+ L+A ++E L
Sbjct: 284 AGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVL 343
Query: 67 RLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTH 126
RL P P+ +PH++ D +I + V GT + +N+ + + W +P++F PERFL
Sbjct: 344 RLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNP- 402
Query: 127 KDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDEPLDMSEGV 185
+ + +PFG+G R C G A F+ P D L EG+
Sbjct: 403 AGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGI 461
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 100 bits (248), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 5 ILGGTDTTMVT-LTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
I G + T+ T L W L L + DV + Q ELD +GR+R D L Y+ A +
Sbjct: 287 IFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLY 346
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E +R P+++PH + + ++ GYH+P T +FVN + DP W P F P RFL
Sbjct: 347 EAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFL 406
Query: 124 TT----HKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDEPL 179
+KD+ R ++ F G+R C G + H +F +EP
Sbjct: 407 DKDGLINKDLTSR-----VMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPA 461
Query: 180 DMSEGVGLTNLKATPLQVLLTPR 202
M+ GLT +K +V +T R
Sbjct: 462 KMNFSYGLT-IKPKSFKVNVTLR 483
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 4/201 (1%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
LI+ GT+TT L WA+ + + ++ + Q E+D +G + + D K+ Y +A++
Sbjct: 281 LIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLH 340
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E LR PL + H + ED + GY +P GT + N+ + D W P F PERFL
Sbjct: 341 EVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFL 400
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDEPLDMSE 183
+ + L+PF GRR C G A F P + D+
Sbjct: 401 DSSGYF---AKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKP 457
Query: 184 GVGLTNLKATPLQVLLTPRLH 204
+G+T L+ P + R H
Sbjct: 458 RLGMT-LQPQPYLICAERRHH 477
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 3/185 (1%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
LI+ GT+TT L WA+ + + ++ + Q E+D +G + + D K+ Y +A++
Sbjct: 281 LIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLH 340
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E LR PL + H + ED + GY +P GT + N+ + D W P F PERFL
Sbjct: 341 EVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFL 400
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDEPLDMSE 183
+ + L+PF GRR C G A F P + D+
Sbjct: 401 DSSGYF---AKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKP 457
Query: 184 GVGLT 188
+G+T
Sbjct: 458 RLGMT 462
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 9/174 (5%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L GT+T TL + L++ H +V K +E+D IG+ RQ D K+ Y +A++
Sbjct: 276 LFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIH 335
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E R P+ + H +D + +P GT +F + + RDP + P +F P+ FL
Sbjct: 336 EIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFL 395
Query: 124 TTHKDIDVRGQ---NFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATP 174
D +GQ + +PF G+R C G A F F +P
Sbjct: 396 ------DKKGQFKKSDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSP 443
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L +GGT+T TL + L++ H +V K +E+D IG+ RQ D K+ Y++A++
Sbjct: 276 LFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIH 335
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E R P+S+ +D + +P GT ++ + + RDP+ + P +F P+ FL
Sbjct: 336 EIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL 395
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
++ +PF G+R C G A
Sbjct: 396 NEKGQFK---KSDAFVPFSIGKRNCFGEGLA 423
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L +GGT+T TL + L++ H +V K +E+D IG+ RQ D K+ Y++A++
Sbjct: 276 LFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIH 335
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E R P+S+ +D + +P GT ++ + + RDP+ + P +F P+ FL
Sbjct: 336 EIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL 395
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
++ +PF G+R C G A
Sbjct: 396 NEKGQFK---KSDAFVPFSIGKRNCFGEGLA 423
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L +GGT+T TL + L++ H +V K +E+D IG+ RQ D K+ Y++A++
Sbjct: 276 LFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIH 335
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E R P+S+ +D + +P GT ++ + + RDP+ + P +F P+ FL
Sbjct: 336 EIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL 395
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
++ +PF G+R C G A
Sbjct: 396 NEKGQFK---KSDAFVPFSIGKRNCFGEGLA 423
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L +GGT+T TL + L++ H +V K +E+D IG+ RQ D K+ Y++A++
Sbjct: 276 LFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIH 335
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E R P+S+ +D + +P GT ++ + + RDP+ + P +F P+ FL
Sbjct: 336 EIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL 395
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
++ +PF G+R C G A
Sbjct: 396 NEKGQFK---KSDAFVPFSIGKRNCFGEGLA 423
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 3/172 (1%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIV 62
+L GT+TT TL + L+L + V ++ Q E++ IG R D K+ Y A++
Sbjct: 275 SLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVI 334
Query: 63 KETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERF 122
E RL P VPH +D GY +P T +F + DP +E PN F P F
Sbjct: 335 HEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF 394
Query: 123 LTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATP 174
L + + R + F +PF G+R C G A F A+P
Sbjct: 395 LDANGALK-RNEGF--MPFSLGKRICAGEGIARTELFLFFTTILQNFSIASP 443
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 3/172 (1%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIV 62
+L GT+TT TL + L+L + V ++ Q E++ IG R D K+ Y A++
Sbjct: 275 SLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVI 334
Query: 63 KETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERF 122
E RL P VPH +D GY +P T +F + DP +E PN F P F
Sbjct: 335 HEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF 394
Query: 123 LTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATP 174
L + + R + F +PF G+R C G A F A+P
Sbjct: 395 LDANGALK-RNEGF--MPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 3/172 (1%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIV 62
+L GT+TT TL + L+L + V ++ Q E++ IG R D K+ Y A++
Sbjct: 275 SLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVI 334
Query: 63 KETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERF 122
E RL P VPH +D GY +P T +F + DP +E PN F P F
Sbjct: 335 HEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF 394
Query: 123 LTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATP 174
L + + R + F +PF G+R C G A F A+P
Sbjct: 395 LDANGALK-RNEGF--MPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 3/172 (1%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIV 62
+L GT+TT TL + L+L + V ++ Q E++ IG R D K+ Y A++
Sbjct: 275 SLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVI 334
Query: 63 KETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERF 122
E RL P VPH +D GY +P T +F + DP +E PN F P F
Sbjct: 335 HEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF 394
Query: 123 LTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATP 174
L + + R + F +PF G+R C G A F A+P
Sbjct: 395 LDANGALK-RNEGF--MPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
I G +TT L++ + + H DV +K Q+E+D + + ++ YL +V
Sbjct: 281 FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVN 340
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
ETLRL+P + + +D I G +P G + + + RDP W +P +F PERF
Sbjct: 341 ETLRLFPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFS 399
Query: 124 TTHKD-IDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE---PL 179
+KD ID + PFGSG R C G+ FA F F P E PL
Sbjct: 400 KKNKDNID----PYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK-PCKETQIPL 454
Query: 180 DMSEGVGLTNLKATPLQV 197
+S G L K L+V
Sbjct: 455 KLSLGGLLQPEKPVVLKV 472
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
I G +TT L++ + + H DV +K Q+E+D + + ++ YL +V
Sbjct: 282 FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVN 341
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
ETLRL+P + + +D I G +P G + + + RDP W +P +F PERF
Sbjct: 342 ETLRLFPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFS 400
Query: 124 TTHKD-IDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE---PL 179
+KD ID + PFGSG R C G+ FA F F P E PL
Sbjct: 401 KKNKDNID----PYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK-PCKETQIPL 455
Query: 180 DMSEGVGLTNLKATPLQV 197
+S G L K L+V
Sbjct: 456 KLSLGGLLQPEKPVVLKV 473
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
I G +TT L++ + + H DV +K Q+E+D + + ++ YL +V
Sbjct: 280 FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVN 339
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
ETLRL+P + + +D I G +P G + + + RDP W +P +F PERF
Sbjct: 340 ETLRLFPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFS 398
Query: 124 TTHKD-IDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE---PL 179
+KD ID + PFGSG R C G+ FA F F P E PL
Sbjct: 399 KKNKDNID----PYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK-PCKETQIPL 453
Query: 180 DMSEGVGLTNLKATPLQV 197
+S G L K L+V
Sbjct: 454 KLSLGGLLQPEKPVVLKV 471
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIV 62
+L GT+TT TL + L+L + V ++ E++ IG R D K+ Y +A++
Sbjct: 275 SLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVI 334
Query: 63 KETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERF 122
E R P+ VPH + + GY +P T +F+ + DP+ +EKP+ F P+ F
Sbjct: 335 YEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHF 394
Query: 123 LTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATP-GDEPLDM 181
L + + + IPF G+R C G A F A+P E +D+
Sbjct: 395 LDANGALK---KTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDL 451
Query: 182 S-EGVGLTNLKATPLQVLLTPRLH 204
+ + G+ + T Q+ PR H
Sbjct: 452 TPQECGVGKIPPT-YQIRFLPRHH 474
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 3/172 (1%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIV 62
+L GT+TT TL + L+L + V ++ Q E++ IG R D K+ Y A++
Sbjct: 275 SLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVI 334
Query: 63 KETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERF 122
E RL P VPH +D GY +P T +F + DP +E PN F P F
Sbjct: 335 HEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF 394
Query: 123 LTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATP 174
L + + R + F +PF G+R C G A F A+P
Sbjct: 395 LDANGALK-RNEGF--MPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L GT+T TL + L++ H +V K +E+D IG+ RQ D K+ Y++A++
Sbjct: 276 LFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIH 335
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E R P+ + +D + +P GT ++ + + RDP+ + P +F P+ FL
Sbjct: 336 EIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL 395
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
++ +PF G+R C G A
Sbjct: 396 NEKGQFK---KSDAFVPFSIGKRNCFGEGLA 423
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 3/151 (1%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L GT+TT TL + L +++ + ++ +K +E+D IG R D +++ Y+ A+V
Sbjct: 275 LFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVH 334
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E R P ++PHE+ D GY +P GT + + + D + P +F+PE FL
Sbjct: 335 EIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFL 394
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
+ PF +G+R C G A
Sbjct: 395 NENGKFKYSDY---FKPFSTGKRVCAGEGLA 422
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L + GT+TT TL + L L+L H +V K Q+E+D IGR R D + Y A+V
Sbjct: 276 LFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVH 335
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E R P VPH D Y +P GT + + + D + PN F P FL
Sbjct: 336 EIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFL 395
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
K+ + + ++ +PF +G+R C G A
Sbjct: 396 D--KNGNFKKSDY-FMPFSAGKRICAGEGLA 423
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L GT+TT TL +AL L+L H +V K Q+E++ IGR R D + Y A+V
Sbjct: 275 LFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVH 334
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E R P S+PH D Y +P GT + +++ + D + P F P FL
Sbjct: 335 EVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFL 394
Query: 124 TTHKDIDVRGQNFE----LIPFGSGRRGCPGISFA 154
G NF+ +PF +G+R C G + A
Sbjct: 395 D-------EGGNFKKSKYFMPFSAGKRICVGEALA 422
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L GT+TT TL +AL L+L H +V K Q+E++ IGR R D + Y A+V
Sbjct: 277 LFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVH 336
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E R P S+PH D Y +P GT + +++ + D + P F P FL
Sbjct: 337 EVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFL 396
Query: 124 TTHKDIDVRGQNFE----LIPFGSGRRGCPGISFA 154
G NF+ +PF +G+R C G + A
Sbjct: 397 D-------EGGNFKKSKYFMPFSAGKRICVGEALA 424
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 262 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 316
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 317 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R CPG FA F+F +
Sbjct: 376 RPERFENPSA---IPQHAFK--PFGNGQRACPGQQFALHEATLVLGMMLKHFDFEDHTNY 430
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 431 ELDIKETLTL 440
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L+ GT+TT TL +AL L+L H +V K Q+E++ +GR R D + Y A+V
Sbjct: 277 LLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVH 336
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E R P S+PH D Y +P GT + ++ + D + P F P FL
Sbjct: 337 EVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFL 396
Query: 124 TTHKDIDVRGQNFE----LIPFGSGRRGCPGISFA 154
G NF+ +PF +G+R C G A
Sbjct: 397 D-------EGGNFKKSNYFMPFSAGKRICVGEGLA 424
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 264 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 318
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P +P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 319 MVLNEALRLWPTSP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 377
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 378 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 432
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 433 ELDIKETLTL 442
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACEGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L GT+TT TL ++L L+L H +V + Q+E++ IGR R D ++ Y A++
Sbjct: 273 LFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIH 332
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E R P ++PH D Y +P GT + ++ + D + P F P FL
Sbjct: 333 EIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFL 392
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
+ ++ +PF +G+R C G A
Sbjct: 393 DESGNFK---KSDYFMPFSAGKRMCVGEGLA 420
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT LT+AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 262 FLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 316
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LR++P P + + ED + G Y + G L V IP++ RD VW + EF
Sbjct: 317 MVLNEALRIWPTAP-AFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEF 375
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 376 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 430
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 431 ELDIEETLTL 440
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIV 62
A++ G++T T+ W L + +H + + +DE++ G R V D +KL + ++
Sbjct: 270 AILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG-GRPVAFEDVRKLRHTGNVI 328
Query: 63 KETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERF 122
E +RL PA + ++ + + GY +PAG + + IQRDP ++ EF P+R+
Sbjct: 329 VEAMRLRPAV-WVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRW 387
Query: 123 LTTHKDIDVRGQN---FELIPFGSGRRGCPGISFA 154
L R N + + PF +G+R CP F+
Sbjct: 388 LPE------RAANVPKYAMKPFSAGKRKCPSDHFS 416
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGKQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 262 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 316
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 317 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 376 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 430
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 431 ELDIKETLTL 440
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 262 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 316
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 317 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 376 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 430
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 431 ELDIKETLTL 440
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 264 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 318
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 319 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 377
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 378 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 432
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 433 ELDIKETLTL 442
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 264 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 318
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 319 MVLNEALRLWPTVP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 377
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 378 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 432
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 433 ELDIKETLTL 442
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 4/151 (2%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L+ G +T L+ L+ H D+ ++ + E + +++ KK+ YL +++
Sbjct: 251 LLFAGHETLTSALSSFCLLLGQHSDIRERVRQE-QNKLQLSQELTAETLKKMPYLDQVLQ 309
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E LRL P E I+DC G+H P G + I + DP+++ P +F PERF
Sbjct: 310 EVLRLIPPVGGGF-RELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERF- 367
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
T F +PFG G R C G FA
Sbjct: 368 -TPDGSATHNPPFAHVPFGGGLRECLGKEFA 397
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 5 ILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQA 60
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 262 LIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGM 316
Query: 61 IVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEFR 118
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EFR
Sbjct: 317 VLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFR 375
Query: 119 PERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDEP 178
PERF + F+ PFG+G+R C G FA F+F +
Sbjct: 376 PERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 430
Query: 179 LDMSEGVGL 187
LD+ E + L
Sbjct: 431 LDIKETLTL 439
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 19/191 (9%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 262 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 316
Query: 60 AIVKETLRLYP-ATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNE 116
++ E LRL+P A P S+ + ED + G Y + G L V IP++ RD +W + E
Sbjct: 317 MVLNEALRLWPTAPPFSL--YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 374
Query: 117 FRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGD 176
FRPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 FRPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTN 429
Query: 177 EPLDMSEGVGL 187
LD+ E + L
Sbjct: 430 YELDIKETLTL 440
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ P+G+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PYGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 9/186 (4%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
++ G +TT L++AL ++ + VL+K +E T + + + K+L Y+ ++
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEA-TRVLVDPVPSYKQVKQLKYVGMVLN 319
Query: 64 ETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEFRPER 121
E LRL+P P + + ED + G Y + G + V IP++ RD +W + EFRPER
Sbjct: 320 EALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPER 378
Query: 122 FLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDEPLDM 181
F + F+ PFG+G+R C G FA F+F + LD+
Sbjct: 379 FENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDI 433
Query: 182 SEGVGL 187
E + L
Sbjct: 434 KETLTL 439
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
+++ DT V+L + L LI H +V + E+ T IG ER + D +KL ++ +
Sbjct: 303 MLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-ERDIKIDDIQKLKVMENFIY 361
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E++R P L V +++ED I GY V GT + +NI ++ R + KPNEF E F
Sbjct: 362 ESMRYQPVVDL-VMRKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPKPNEFTLENFA 419
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDEPLDMSE 183
+V + F+ PFG G RGC G A F T + ++ +
Sbjct: 420 K-----NVPYRYFQ--PFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQ 472
Query: 184 GVGLTNLK----ATPLQVLLTPR 202
+ +L L+++ TPR
Sbjct: 473 KIHDLSLHPDETKNMLEMIFTPR 495
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L L +TT +L W L + + ++ E+ + + + D + + YL+A +K
Sbjct: 291 LQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLK 350
Query: 64 ETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERF 122
E++RL P+ P + +++ T+ G Y +P GT L +N + + +E ++FRPER+
Sbjct: 351 ESMRLTPSVPFTT--RTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERW 408
Query: 123 LTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDEPLDM 181
L K I+ F +PFG G+R C G A ++ +EP++M
Sbjct: 409 LQKEKKIN----PFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEM 463
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G + T L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G + T L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G + T L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G + T L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G ++T L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLLL 439
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G ++T L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 262 FLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 316
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 317 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 376 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 430
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 431 ELDIKETLLL 440
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ P+G+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PWGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 17/186 (9%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G ++T L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSE 183
LD+ E
Sbjct: 430 ELDIKE 435
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ P G+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PHGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++ L ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 267 FLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 321
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G + V IP++ RD +W + EF
Sbjct: 322 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEF 380
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 381 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 435
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 436 ELDIKETLTL 445
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L G DTT L L + + DV + + E + + T +L L+A +K
Sbjct: 285 LTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALK 344
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
ETLRLYP L + D + YH+PAGT + V + + R+ ++ +P + P+R+L
Sbjct: 345 ETLRLYPVG-LFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWL 403
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPG 150
DI G+NF +PFG G R C G
Sbjct: 404 ----DIRGSGRNFHHVPFGFGMRQCLG 426
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
++ G +TT L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ P G+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PAGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
+ G + T L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 262 FLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 316
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 317 MVLNEALRLWPTGP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 375
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 376 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 430
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 431 ELDIKETLVL 440
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
+ G + T L++AL ++ + VL+KA +E L + +QV K+L Y+
Sbjct: 261 FLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTGP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLVL 439
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
+ G + T L++AL ++ + L+KA +E L + +QV K+L Y+
Sbjct: 262 FLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSHKQV-----KQLKYVG 316
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD VW + EF
Sbjct: 317 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEF 375
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 376 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 430
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 431 ELDIKETLTL 440
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDE----LDTHIGRERQVNESDTKKLVYLQ 59
+ G + T L++AL ++ + L+KA +E L + +QV K+L Y+
Sbjct: 261 FLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSYKQV-----KQLKYVG 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAG-YHVPAGTRLFVNIPKIQRDPNVW-EKPNEF 117
++ E LRL+P P + + ED + G Y + G L V IP++ RD +W + EF
Sbjct: 316 MVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEF 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
RPERF + F+ PFG+G+R C G FA F+F +
Sbjct: 375 RPERFENPSA---IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNY 429
Query: 178 PLDMSEGVGL 187
LD+ E + L
Sbjct: 430 ELDIKETLTL 439
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLV----YLQ 59
++ GG +TT +TL W L + +V Q+ L + R+ E D K++ L+
Sbjct: 284 MLAGGVNTTSMTLQWHLYEMARSLNV----QEMLREEVLNARRQAEGDISKMLQMVPLLK 339
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRP 119
A +KETLRL+P + +++ D + Y +PA T + V I + RDP + P++F P
Sbjct: 340 ASIKETLRLHPIS-VTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDP 398
Query: 120 ERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
R+L+ KD+ +F + FG G R C G A
Sbjct: 399 TRWLSKDKDL----IHFRNLGFGWGVRQCVGRRIA 429
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLV----YLQ 59
++ GG DTT +TL W L + + K QD L + R + D ++ L+
Sbjct: 280 MLAGGVDTTSMTLQWHLYEMARN----LKVQDMLRAEVLAARHQAQGDMATMLQLVPLLK 335
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRP 119
A +KETLRL+P + +++ + D + Y +PA T + V I + R+P + P F P
Sbjct: 336 ASIKETLRLHPIS-VTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDP 394
Query: 120 ERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
R+L+ K+I F + FG G R C G A
Sbjct: 395 TRWLSKDKNITY----FRNLGFGWGVRQCLGRRIA 425
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLV----YLQ 59
++ GG DTT +TL W L + + K QD L + R + D ++ L+
Sbjct: 283 MLAGGVDTTSMTLQWHLYEMARN----LKVQDMLRAEVLAARHQAQGDMATMLQLVPLLK 338
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRP 119
A +KETLRL+P + +++ + D + Y +PA T + V I + R+P + P F P
Sbjct: 339 ASIKETLRLHPIS-VTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDP 397
Query: 120 ERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
R+L+ K+I F + FG G R C G A
Sbjct: 398 TRWLSKDKNITY----FRNLGFGWGVRQCLGRRIA 428
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 5/170 (2%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQ-VNESDTKKLVYLQAI 61
L+L G T+ T W + + KK E T G + K L L
Sbjct: 259 GLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRC 318
Query: 62 VKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPER 121
+KETLRL P + + T+AGY +P G ++ V+ QR + W + +F P+R
Sbjct: 319 IKETLRLRPPIMIMMRMARTPQ-TVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDR 377
Query: 122 FLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEF 171
+L +D G+ F +PFG+GR C G +FA +EF
Sbjct: 378 YL---QDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEF 424
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIV 62
+++ G T+ T +W L ++ H D DELD G R V+ +++ L+ ++
Sbjct: 252 SMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVL 311
Query: 63 KETLRLYPATPLSVPHESIE-DCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPER 121
KETLRL+P PL + + + + G+ + G + + R P + P++F P R
Sbjct: 312 KETLRLHP--PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 122 FLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEF 171
+ ++ + + IPFG+GR C G +FA +EF
Sbjct: 370 YEQPRQEDLL--NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIV 62
+++ G T+ T +W L ++ H D DELD G R V+ +++ L+ ++
Sbjct: 252 SMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVL 311
Query: 63 KETLRLYPATPLSVPHESIE-DCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPER 121
KETLRL+P PL + + + + G+ + G + + R P + P++F P R
Sbjct: 312 KETLRLHP--PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 122 FLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEF 171
+ ++ + + IPFG+GR C G +FA +EF
Sbjct: 370 YEQPRQEDLL--NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIV 62
+++ G T+ T +W L ++ H D DELD G R V+ +++ L+ ++
Sbjct: 252 SMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVL 311
Query: 63 KETLRLYPATPLSVPHESIE-DCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPER 121
KETLRL+P PL + + + + G+ + G + + R P + P++F P R
Sbjct: 312 KETLRLHP--PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 122 FLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEF 171
+ ++ + + IPFG+GR C G +FA +EF
Sbjct: 370 YEQPRQEDLL--NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIV 62
+++ G T+ T +W L ++ H D DELD G R V+ +++ L+ ++
Sbjct: 252 SMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVL 311
Query: 63 KETLRLYPATPLSVPHESIE-DCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPER 121
KETLRL+P PL + + + + G+ + G + + R P + P++F P R
Sbjct: 312 KETLRLHP--PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 122 FLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEF 171
+ ++ + + IPFG+GR C G +FA +EF
Sbjct: 370 YEQPRQEDLL--NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 81/200 (40%), Gaps = 10/200 (5%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
+ G +T+ L + + + +++ + Q E+D IG +R ++ D +L YL ++K
Sbjct: 251 FFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLK 310
Query: 64 ETLRLYPATPLSVPHESIEDCT-IAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERF 122
E+LRLYP P +E+ T I G VP T L + + R +E P F P+RF
Sbjct: 311 ESLRLYP--PAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRF 368
Query: 123 LTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDEPLDMS 182
F PF G R C G FA EF + +
Sbjct: 369 -----GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQ 423
Query: 183 EGVGLTNLKATPLQVLLTPR 202
E L L P+ L PR
Sbjct: 424 EQATLKPLD--PVLCTLRPR 441
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Query: 57 YLQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNE 116
Y + V+E R YP P V S +D G P G ++ +++ D W P E
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 117 FRPERFLTTHKDIDVRGQNFELIPFGSGR----RGCPG 150
FRPERF +D +F IP G G CPG
Sbjct: 324 FRPERFRAWDED------SFNFIPQGGGDHYLGHRCPG 355
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Query: 57 YLQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNE 116
Y + V+E R YP P V S +D G P G ++ +++ D W P E
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 117 FRPERFLTTHKDIDVRGQNFELIPFGSGR----RGCPG 150
FRPERF +D +F IP G G CPG
Sbjct: 324 FRPERFRAWDED------SFNFIPQGGGDHYLGHRCPG 355
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Query: 57 YLQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNE 116
Y + V+E R YP P V S +D G P G ++ +++ D W P E
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 117 FRPERFLTTHKDIDVRGQNFELIPFGSGR----RGCPG 150
FRPERF +D +F IP G G CPG
Sbjct: 324 FRPERFRAWDED------SFNFIPQGGGDHYLGHRCPG 355
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Query: 57 YLQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNE 116
Y + V+E R YP P V S +D G P G ++ +++ D W P E
Sbjct: 273 YAELFVQEVRRFYPFGPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 117 FRPERFLTTHKDIDVRGQNFELIPFGSGR----RGCPG 150
FRPERF +D +F IP G G CPG
Sbjct: 332 FRPERFRAWDED------SFNFIPQGGGDHYLGHRCPG 363
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Query: 57 YLQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNE 116
Y + V+E R YP P V S +D G P G ++ +++ D W P E
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 117 FRPERFLTTHKDIDVRGQNFELIPFGSGR----RGCPG 150
FRPERF +D +F IP G G CPG
Sbjct: 332 FRPERFRAWDED------SFNFIPQGGGDHYLGHRCPG 363
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Query: 57 YLQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNE 116
Y + V+E R YP P V S +D G P G ++ +++ D W P E
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 117 FRPERFLTTHKDIDVRGQNFELIPFGSGR----RGCPG 150
FRPERF +D +F IP G G CPG
Sbjct: 332 FRPERFRAWDED------SFNFIPQGGGDHYLGHRCPG 363
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 11/120 (9%)
Query: 59 QAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFR 118
+ V+E R YP P + +D GT + +++ DP +W+ P+EFR
Sbjct: 277 EMFVQEVRRYYPFGPF-LGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFR 335
Query: 119 PERFLTTHKDIDVRGQNFELIPFGSGR----RGCPGISFAXXXXXXXXXXXXHGFEFATP 174
PERF +++ F++IP G G CPG H E+ P
Sbjct: 336 PERFAEREENL------FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVP 389
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 18 WALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVP 77
W + +L H + L+ ++E+ G+ ++ E V+ +++ ETLRL A ++
Sbjct: 275 WVMGYLLTHPEALRAVREEIQG--GKHLRLEERQKNTPVF-DSVLWETLRLTAAALIT-- 329
Query: 78 HESIED---CTIAG--YHVPAGTRLFVNIPKI--QRDPNVWEKPNEFRPERFL----TTH 126
+ +D C G YH+ G RL V P I Q DP + ++P F+ +RFL T
Sbjct: 330 RDVTQDKKICLSNGQEYHLRRGDRLCV-FPFISPQMDPQIHQQPEMFQFDRFLNADRTEK 388
Query: 127 KDIDVRGQNFEL--IPFGSGRRGCPGISFA 154
KD G + +P+G+ CPG FA
Sbjct: 389 KDFFKNGARVKYPSVPWGTEDNLCPGRHFA 418
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Query: 62 VKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPER 121
+ ETLR P L +P + +D + G + T +F I RDP +E+P+ F R
Sbjct: 306 IAETLRYKPPVQL-IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHR 364
Query: 122 FLTTHKDIDVRGQ---NFELIPFGSGRRGCPGISFA 154
+D+ ++ + FGSG C G +FA
Sbjct: 365 -----EDLGIKSAFSGAARHLAFGSGIHNCVGTAFA 395
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 30/152 (19%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIV 62
A+I GTDTT+ + +A+ +L + L+ + E ++ +
Sbjct: 250 AIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG------------------LMRNAL 291
Query: 63 KETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERF 122
E LR + + +D G + G +F+ IP RD V+ +P+ F
Sbjct: 292 DEVLRFENILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVF----- 346
Query: 123 LTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
DVR + +G G CPG+S A
Sbjct: 347 -------DVRRDTSASLAYGRGPHVCPGVSLA 371
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 30/152 (19%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIV 62
A+I GTDTT+ + +A+ +L + L+ + E ++ +
Sbjct: 250 AIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG------------------LMRNAL 291
Query: 63 KETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERF 122
E LR + + +D G + G +F+ IP RD V+ +P+ F
Sbjct: 292 DEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVF----- 346
Query: 123 LTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
DVR + +G G CPG+S A
Sbjct: 347 -------DVRRDTSASLAYGRGPHVCPGVSLA 371
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
Query: 62 VKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPER 121
V+E LR P P++ + ED + G +P GT +F+ RDP V+ + F
Sbjct: 280 VEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF---- 335
Query: 122 FLTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
DI V+ + I FG G C G + A
Sbjct: 336 ------DITVK-REAPSIAFGGGPHFCLGTALA 361
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
Query: 62 VKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPER 121
V+E LR P P++ + ED + G +P GT +F+ RDP V+ + F
Sbjct: 290 VEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF---- 345
Query: 122 FLTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
DI V+ + I FG G C G + A
Sbjct: 346 ------DITVK-REAPSIAFGGGPHFCLGTALA 371
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 20/180 (11%)
Query: 3 ALILGGTDTTMVTLTWALTLILN-----HGDVLKKAQDELDTHIGRERQVNESDTKKLVY 57
A + G T+ +T TW++ +++ H + L+K +E + ++E + +
Sbjct: 273 AAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPF 327
Query: 58 LQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEF 117
+ +E++R P L + + + D + Y VP G + + D + +P +
Sbjct: 328 AERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRW 386
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
PER D V G I FG+G C G F ++F DE
Sbjct: 387 DPER------DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDE 437
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 20/180 (11%)
Query: 3 ALILGGTDTTMVTLTWALTLILN-----HGDVLKKAQDELDTHIGRERQVNESDTKKLVY 57
A + G T+ +T TW++ +++ H + L+K +E + ++E + +
Sbjct: 261 AAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPF 315
Query: 58 LQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEF 117
+ +E++R P L + + + D + Y VP G + + D + +P +
Sbjct: 316 AERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRW 374
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
PER D V G I FG+G C G F ++F DE
Sbjct: 375 DPER------DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDE 425
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 20/180 (11%)
Query: 3 ALILGGTDTTMVTLTWALTLILN-----HGDVLKKAQDELDTHIGRERQVNESDTKKLVY 57
A + G T+ +T TW++ +++ H + L+K +E + ++E + +
Sbjct: 259 AAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPF 313
Query: 58 LQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEF 117
+ +E++R P L + + + D + Y VP G + + D + +P +
Sbjct: 314 AERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRW 372
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
PER D V G I FG+G C G F ++F DE
Sbjct: 373 DPER------DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDE 423
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 58 LQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEF 117
+ +V+E LR + + + V + D TI G +P+GT + +P RDP ++ P+ F
Sbjct: 287 VDTVVEEVLR-WTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTF 345
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
P R H I FG G C G + A
Sbjct: 346 LPGRKPNRH------------ITFGHGMHHCLGSALA 370
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 20/180 (11%)
Query: 3 ALILGGTDTTMVTLTWALTLILN-----HGDVLKKAQDELDTHIGRERQVNESDTKKLVY 57
A + G T+ +T TW++ +++ H + L+K +E + ++E + +
Sbjct: 260 AAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPF 314
Query: 58 LQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEF 117
+ +E++R P L + + + D + Y VP G + + D + +P +
Sbjct: 315 AERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRW 373
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
PER D V G I FG+G C G F ++F DE
Sbjct: 374 DPER------DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDE 424
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 20/180 (11%)
Query: 3 ALILGGTDTTMVTLTWALTLILN-----HGDVLKKAQDELDTHIGRERQVNESDTKKLVY 57
A + G T+ +T TW++ +++ H + L+K +E + ++E + +
Sbjct: 273 AAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPF 327
Query: 58 LQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEF 117
+ +E++R P L + + + D + Y VP G + + D + +P +
Sbjct: 328 AERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRW 386
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
PER D V G I FG+G C G F ++F DE
Sbjct: 387 DPER------DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDE 437
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 20/180 (11%)
Query: 3 ALILGGTDTTMVTLTWALTLILN-----HGDVLKKAQDELDTHIGRERQVNESDTKKLVY 57
A + G T+ +T TW++ +++ H + L+K +E + ++E + +
Sbjct: 260 AAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPF 314
Query: 58 LQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEF 117
+ +E++R P L + + + D + Y VP G + + D + +P +
Sbjct: 315 AERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRW 373
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDE 177
PER D V G I FG+G C G F ++F DE
Sbjct: 374 DPER------DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDE 424
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Query: 59 QAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFR 118
A+++ET+R P L V + +D TI + VP G + + + RDP + P+ F
Sbjct: 290 SAVIEETMRYDPPVQL-VSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFD 348
Query: 119 PERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
P+R H + FG G C G A
Sbjct: 349 PDRAQIRH------------LGFGKGAHFCLGAPLA 372
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 18 WALTLILNHGDVLKKAQDELDTHIGRERQ----------VNESDTKKLVYLQAIVKETLR 67
W+L ++ + + +K A +E+ + Q +++++ L L +I+KE+LR
Sbjct: 279 WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLR 338
Query: 68 LYPATPLSVPHESIEDCTI----AGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
L A+ L++ + ED T+ Y++ + + + DP ++ P F+ +R+L
Sbjct: 339 LSSAS-LNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYL 396
Query: 124 ----TTHKDIDVRGQN--FELIPFGSGRRGCPGISFA 154
T G + +PFGSG CPG FA
Sbjct: 397 DENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFA 433
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 18 WALTLILNHGDVLKKAQDELDTHIGRERQ----------VNESDTKKLVYLQAIVKETLR 67
W+L ++ + + +K A +E+ + Q +++++ L L +I+KE+LR
Sbjct: 279 WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLR 338
Query: 68 LYPATPLSVPHESIEDCTI----AGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
L A+ L++ + ED T+ Y++ + + + DP ++ P F+ +R+L
Sbjct: 339 LSSAS-LNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYL 396
Query: 124 ----TTHKDIDVRGQN--FELIPFGSGRRGCPGISFA 154
T G + +PFGSG CPG FA
Sbjct: 397 DENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFA 433
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 53 KKLVYLQAIVKETLRLYPATPLSVPH-ESIEDCTI----AGYHVPAGTRLFVNIPKIQRD 107
+K+ +++V E LR P P++ + + +D I A + V AG L+ P RD
Sbjct: 342 EKMELTKSVVYECLRFEP--PVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRD 399
Query: 108 PNVWEKPNEFRPERFL 123
P ++++ +EF PERF+
Sbjct: 400 PKIFDRADEFVPERFV 415
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 53 KKLVYLQAIVKETLRLYPATPLSVPH-ESIEDCTI----AGYHVPAGTRLFVNIPKIQRD 107
+K+ +++V E LR P P++ + + +D I A + V AG L+ P RD
Sbjct: 342 EKMELTKSVVYECLRFEP--PVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRD 399
Query: 108 PNVWEKPNEFRPERFL 123
P ++++ +EF PERF+
Sbjct: 400 PKIFDRADEFVPERFV 415
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 28/152 (18%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L++ G +T LTW+ L+ + D K+ + + A +
Sbjct: 218 LLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA------------------LAAFQ 259
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGY-HVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERF 122
E LRLYP P + +E + G +P GT L ++ QR + + F+PERF
Sbjct: 260 EALRLYP--PAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPERF 315
Query: 123 LTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
L G+ F PFG G+R C G FA
Sbjct: 316 LAERGTPS--GRYF---PFGLGQRLCLGRDFA 342
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 59 QAIVKETLRLYPATPLSVPHESIEDCTI----AGYHVPAGTRLFVNIPKIQRDPNVWEKP 114
+++V E+LR+ P P ++ + TI A + V G LF P +DP V+++P
Sbjct: 331 KSVVYESLRIEPPVPPQY-GKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRP 389
Query: 115 NEFRPERFL 123
E+ P+RF+
Sbjct: 390 EEYVPDRFV 398
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 61/152 (40%), Gaps = 28/152 (18%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L++ G +T LTW+ L+ + D K+ + A +
Sbjct: 218 LLVAGHETVASALTWSFLLLSHRPDWQKRV------------------AESEEAALAAFQ 259
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGY-HVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERF 122
E LRLYP P + +E + G +P GT L ++ QR + FRPERF
Sbjct: 260 EALRLYP--PAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQR--LHFPDGEAFRPERF 315
Query: 123 LTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
L G+ F PFG G+R C G FA
Sbjct: 316 LEERGTPS--GRYF---PFGLGQRLCLGRDFA 342
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 58 LQAIVKETLRLYPATPLSVPHESIEDCTI-----AGYHVPAGTRLFVNIPKI--QRDPNV 110
L +++ E+LRL A P + E + D + +++ G RL + P + QRDP +
Sbjct: 331 LDSVLSESLRL-TAAPF-ITREVVVDLAMPMADGREFNLRRGDRLLL-FPFLSPQRDPEI 387
Query: 111 WEKPNEFRPERFL----TTHKDIDVRGQNFE--LIPFGSGRRGCPGISFA 154
+ P F+ RFL + KD G+ + +P+G+G C G S+A
Sbjct: 388 YTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYA 437
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 58 LQAIVKETLRLYPATPLSVPHESIEDCTI-----AGYHVPAGTRLFVNIPKI--QRDPNV 110
L +++ E+LRL A P + E + D + +++ G RL + P + QRDP +
Sbjct: 319 LDSVLSESLRL-TAAPF-ITREVVVDLAMPMADGREFNLRRGDRLLL-FPFLSPQRDPEI 375
Query: 111 WEKPNEFRPERFL----TTHKDIDVRGQNFE--LIPFGSGRRGCPGISFA 154
+ P F+ RFL + KD G+ + +P+G+G C G S+A
Sbjct: 376 YTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYA 425
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 13/94 (13%)
Query: 61 IVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
+V E +R + A S ++ D + G ++ G R+ ++ P RD V+ P+EF
Sbjct: 303 LVDEAVR-WTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDIT 361
Query: 121 RFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
RF H + FG G C G A
Sbjct: 362 RFPNRH------------LGFGWGAHMCLGQHLA 383
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 13/90 (14%)
Query: 62 VKETLRLYP-ATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
+ E LR P + + ++ED I G + AG ++V+ RDP V+ P+ E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 121 RFLTTHKDIDVRGQNFELIPFGSGRRGCPG 150
R H + FG G CPG
Sbjct: 338 RSPNPH------------VSFGFGPHYCPG 355
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 13/90 (14%)
Query: 62 VKETLRLYP-ATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
+ E LR P + + ++ED I G + AG ++V+ RDP V+ P+ E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 121 RFLTTHKDIDVRGQNFELIPFGSGRRGCPG 150
R H + FG G CPG
Sbjct: 338 RSPNPH------------VSFGFGPHYCPG 355
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 13/90 (14%)
Query: 62 VKETLRLYP-ATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
+ E LR P + + ++ED I G + AG ++V+ RDP V+ P+ E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 121 RFLTTHKDIDVRGQNFELIPFGSGRRGCPG 150
R H + FG G CPG
Sbjct: 338 RSPNPH------------VSFGFGPHYCPG 355
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 13/90 (14%)
Query: 62 VKETLRLYP-ATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
+ E LR P + + ++ED I G + AG ++V+ RDP V+ P+ E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 121 RFLTTHKDIDVRGQNFELIPFGSGRRGCPG 150
R H + FG G CPG
Sbjct: 338 RSPNPH------------VSFGFGPHYCPG 355
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 13/90 (14%)
Query: 62 VKETLRLYP-ATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
+ E LR P + + ++ED I G + AG ++V+ RDP V+ P+ E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 121 RFLTTHKDIDVRGQNFELIPFGSGRRGCPG 150
R H + FG G CPG
Sbjct: 338 RSPNPH------------VSFGFGPHYCPG 355
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 13/90 (14%)
Query: 62 VKETLRLYP-ATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
+ E LR P + + ++ED I G + AG ++V+ RDP V+ P+ E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 121 RFLTTHKDIDVRGQNFELIPFGSGRRGCPG 150
R H + FG G CPG
Sbjct: 338 RSPNPH------------VSFGFGPHYCPG 355
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 13/90 (14%)
Query: 62 VKETLRLYP-ATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
+ E LR P + + ++ED I G + AG ++V+ RDP V+ P+ E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 121 RFLTTHKDIDVRGQNFELIPFGSGRRGCPG 150
R H + FG G CPG
Sbjct: 338 RSPNPH------------VSFGFGPHYCPG 355
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 10/96 (10%)
Query: 59 QAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFR 118
A+V+ETLR T + + ED + +PAG L V+ + RD E+ +
Sbjct: 276 SAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRD----ERAHGPT 331
Query: 119 PERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
+RF T R I FG G CPG + +
Sbjct: 332 ADRFDLT------RTSGNRHISFGHGPHVCPGAALS 361
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 72/179 (40%), Gaps = 15/179 (8%)
Query: 3 ALILGGTDTTMVTLTWALTLILN--HGDVLKKAQDELDTHIGRERQVNESDT-KKLVYLQ 59
A + G T+ +T TW+L +++ + L K E+D Q+N + +++ + +
Sbjct: 259 AAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPA---QLNYDNVMEEMPFAE 315
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRP 119
+E++R P + + + ++ + Y VP G + + +D + P E+ P
Sbjct: 316 QCARESIRRDPPLVMLM-RKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNP 374
Query: 120 ERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFAXXXXXXXXXXXXHGFEFATPGDEP 178
ER +++ + FG+G C G F ++F G P
Sbjct: 375 ER--------NMKLVDGAFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDFELLGPLP 425
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 34.7 bits (78), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 31/151 (20%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L + G +TT+ ++ ++ +L H + L K ++ D IG V+
Sbjct: 231 LAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDL-IG-----------------TAVE 272
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E LR T ++ S ED I G + G ++++ + RDP+++ P+ F R
Sbjct: 273 ECLRYESPTQMTARVAS-EDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSP 331
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
H + FG G C G S A
Sbjct: 332 NPH------------LSFGHGHHVCLGSSLA 350
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 58 LQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEF 117
+ +V+E LR + + + + ED + G + AG + V+I + RD +E P+ F
Sbjct: 276 VSGVVEELLR-FTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIF 334
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
R H + FG G C G + A
Sbjct: 335 DARRNARHH------------VGFGHGIHQCLGQNLA 359
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 15/98 (15%)
Query: 58 LQAIVKETLRLYPATPLS-VPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNE 116
L IV+E +R TP+ + D + G + AG L +N DP + +P +
Sbjct: 322 LPGIVEEAIRW--TTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRK 379
Query: 117 FRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
F P R H + FG+G C G+ A
Sbjct: 380 FDPTRPANRH------------LAFGAGSHQCLGLHLA 405
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRP 119
AI+ E +R+ P LS ED I G + AG+ + I RDP V++ P+ F
Sbjct: 268 AIINEMVRMDPPQ-LSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 326
Query: 120 ERFLTTHKDIDVRGQNFELIPFGSGRRGCPG 150
R +++ FG G C G
Sbjct: 327 TRPPAASRNLS----------FGLGPHSCAG 347
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 33.5 bits (75), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 60 AIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRP 119
AI+ E +R+ P LS ED I G + AG+ + I RDP V++ P+ F
Sbjct: 266 AIINEMVRMDPPQ-LSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 324
Query: 120 ERFLTTHKDIDVRGQNFELIPFGSGRRGCPG 150
R +++ FG G C G
Sbjct: 325 TRPPAASRNLS----------FGLGPHSCAG 345
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 59 QAIVKETLRLYPATPLS-VPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEF 117
Q V E +R Y P S P + ED T+AG + G + ++P RDP + P+
Sbjct: 270 QRAVDELIR-YLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPAL--APDVD 326
Query: 118 RPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
R +DV + + FG G C G + A
Sbjct: 327 R----------LDVTREPIPHVAFGHGVHHCLGAALA 353
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 33.5 bits (75), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 61 IVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
V+E R + AT L++ + ED I V A + + RD V+E P+EF
Sbjct: 275 FVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 334
Query: 121 R 121
R
Sbjct: 335 R 335
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 61 IVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
V+E R + AT L++ + ED I V A + + RD V+E P+EF
Sbjct: 274 FVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 121 R 121
R
Sbjct: 334 R 334
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 29/152 (19%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIV 62
AL+L G TT V L G++++ LD H E + + AIV
Sbjct: 237 ALLLAGHITTTVLL----------GNIVRT----LDEHPAHWDAAAEDPGR----IPAIV 278
Query: 63 KETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERF 122
+E LR P P + + + +AG +PA + + RD + + P+ F P R
Sbjct: 279 EEVLRYRPPFP-QMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR- 336
Query: 123 LTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
+ + FG G C G A
Sbjct: 337 ---------KSGGAAQLSFGHGVHFCLGAPLA 359
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 29/152 (19%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIV 62
AL+L G TT V L G++++ LD H E + + AIV
Sbjct: 257 ALLLAGHITTTVLL----------GNIVRT----LDEHPAHWDAAAEDPGR----IPAIV 298
Query: 63 KETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERF 122
+E LR P P + + + +AG +PA + + RD + + P+ F P R
Sbjct: 299 EEVLRYRPPFP-QMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR- 356
Query: 123 LTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
+ + FG G C G A
Sbjct: 357 ---------KSGGAAQLSFGHGVHFCLGAPLA 379
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 61 IVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
V+E R + A+ L++ + ED I V A + + RD V+E P+EF
Sbjct: 275 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 334
Query: 121 R 121
R
Sbjct: 335 R 335
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 61 IVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
V+E R + A+ L++ + ED I V A + + RD V+E P+EF
Sbjct: 274 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 121 R 121
R
Sbjct: 334 R 334
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 61 IVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
V+E R + A+ L++ + ED I V A + + RD V+E P+EF
Sbjct: 275 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 334
Query: 121 R 121
R
Sbjct: 335 R 335
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 61 IVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
V+E R + A+ L++ + ED I V A + + RD V+E P+EF
Sbjct: 276 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 335
Query: 121 R 121
R
Sbjct: 336 R 336
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 61 IVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
V+E R + A+ L++ + ED I V A + + RD V+E P+EF
Sbjct: 274 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 121 R 121
R
Sbjct: 334 R 334
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 61 IVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
V+E R + A+ L++ + ED I V A + + RD V+E P+EF
Sbjct: 274 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 121 R 121
R
Sbjct: 334 R 334
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 61 IVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
V+E R + A+ L++ + ED I V A + + RD V+E P+EF
Sbjct: 274 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 121 R 121
R
Sbjct: 334 R 334
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 61 IVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
V+E R + A+ L++ + ED I V A + + RD V+E P+EF
Sbjct: 274 FVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 121 R 121
R
Sbjct: 334 R 334
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 61 IVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
V+E R + A L++ + ED I V A + + RD V+E P+EF
Sbjct: 275 FVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 334
Query: 121 R 121
R
Sbjct: 335 R 335
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 61 IVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPE 120
V+E R + A L++ + ED I V A + + RD V+E P+EF
Sbjct: 274 FVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMN 333
Query: 121 R 121
R
Sbjct: 334 R 334
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 58/151 (38%), Gaps = 31/151 (20%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L+ G +TT L A+ + H DVL DEL R ES A V+
Sbjct: 251 LLTAGHETTTNFLAKAVLTLRAHRDVL----DEL-------RTTPES-------TPAAVE 292
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E +R P +V + ED + + +P G+R+ + RDP + P+
Sbjct: 293 ELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDV------- 344
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
+DV + FG G C G + A
Sbjct: 345 -----LDVHRAAERQVGFGLGIHYCLGATLA 370
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 23/122 (18%)
Query: 1 MQALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQA 60
+ LI+GG +TT + + +I + D++ A L
Sbjct: 182 IMLLIIGGNETTTNLIGNMIRVIDENPDIIDDA---------------------LKNRSG 220
Query: 61 IVKETLRLYPATPLSVPHE-SIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRP 119
V+ETLR Y +PH + ED I + G ++ V + RD +++P+ F+
Sbjct: 221 FVEETLRYYSPIQF-LPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKI 279
Query: 120 ER 121
R
Sbjct: 280 GR 281
>pdb|3AXH|A Chain A, Crystal Structure Of Isomaltase In Complex With Isomaltose
pdb|3AXI|A Chain A, Crystal Structure Of Isomaltase In Complex With Maltose
Length = 589
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 41 IGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLF-- 98
I E N + KK + A++ R + TP+ E AG+ P+ F
Sbjct: 419 IKEEHGENSEEMKKFLEAIALIS---RDHARTPMQWSREEPN----AGFSGPSAKPWFYL 471
Query: 99 -------VNIPKIQRDPN----VWEKPNEFRPERFLTTHKDIDVRGQNFELI 139
+N+ +DPN W++ +FR HKDI V G +FE I
Sbjct: 472 NDSFREGINVEDEIKDPNSVLNFWKEALKFR-----KAHKDITVYGYDFEFI 518
>pdb|3A47|A Chain A, Crystal Structure Of Isomaltase From Saccharomyces
Cerevisiae
pdb|3A4A|A Chain A, Crystal Structure Of Isomaltase From Saccharomyces
Cerevisiae
pdb|3AJ7|A Chain A, Crystal Structure Of Isomaltase From Saccharomyces
Cerevisiae
Length = 589
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 41 IGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLF-- 98
I E N + KK + A++ R + TP+ E AG+ P+ F
Sbjct: 419 IKEEHGENSEEMKKFLEAIALIS---RDHARTPMQWSREEPN----AGFSGPSAKPWFYL 471
Query: 99 -------VNIPKIQRDPN----VWEKPNEFRPERFLTTHKDIDVRGQNFELI 139
+N+ +DPN W++ +FR HKDI V G +FE I
Sbjct: 472 NDSFREGINVEDEIKDPNSVLNFWKEALKFR-----KAHKDITVYGYDFEFI 518
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 72 TPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDV 131
T + + ++ED + G + AG ++V+ RDP+V+ P+ +R H
Sbjct: 292 TSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDPNPH----- 346
Query: 132 RGQNFELIPFGSGRRGCPGISFA 154
+ +G+G C G A
Sbjct: 347 -------LAYGNGHHFCTGAVLA 362
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 72 TPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDV 131
T + + ++ED + G + AG ++V+ RDP+V+ P+ +R H
Sbjct: 292 TSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDPNPH----- 346
Query: 132 RGQNFELIPFGSGRRGCPGISFA 154
+ +G+G C G A
Sbjct: 347 -------LAYGNGHHFCTGAVLA 362
>pdb|1BX2|B Chain B, Crystal Structure Of Hla-Dr2 (Dra0101,Drb11501) Complexed
With A Peptide From Human Myelin Basic Protein
pdb|1BX2|E Chain E, Crystal Structure Of Hla-Dr2 (Dra0101,Drb11501) Complexed
With A Peptide From Human Myelin Basic Protein
Length = 191
Score = 30.0 bits (66), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 25 NHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDC 84
+ D+L++A+ +DT+ V ES T +Q V+ + +YP+ + H ++ C
Sbjct: 61 SQKDILEQARAAVDTYCRHNYGVVESFT-----VQRRVQPKVTVYPSKTQPLQHHNLLVC 115
Query: 85 TIAGYHVPAG--TRLFVN 100
+++G++ P R F+N
Sbjct: 116 SVSGFY-PGSIEVRWFLN 132
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 17/109 (15%)
Query: 51 DTKKLV-----YLQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQ 105
D +KL+ + + V+E LR + + ED T +G +PAG + + +
Sbjct: 257 DQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAAN 316
Query: 106 RDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
RD + +P+ R D G F FG G C G A
Sbjct: 317 RDADWMPEPDRLDITR--------DASGGVF----FGHGIHFCLGAQLA 353
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 30.0 bits (66), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 12/71 (16%)
Query: 80 SIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELI 139
+ D +AG + G ++ + + RDP W+ P+ + R + H +
Sbjct: 305 TTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKTSGH------------V 352
Query: 140 PFGSGRRGCPG 150
FGSG C G
Sbjct: 353 GFGSGVHMCVG 363
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 30.0 bits (66), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 17/109 (15%)
Query: 51 DTKKLV-----YLQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQ 105
D +KL+ + + V+E LR + + ED T +G +PAG + + +
Sbjct: 257 DQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAAN 316
Query: 106 RDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
RD + +P+ R D G F FG G C G A
Sbjct: 317 RDADWMPEPDRLDITR--------DASGGVF----FGHGIHFCLGAQLA 353
>pdb|1YMM|B Chain B, TcrHLA-Dr2bMBP-Peptide Complex
Length = 198
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 25 NHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDC 84
+ D+L++A+ +DT+ V ES T +Q V+ + +YP+ + H ++ C
Sbjct: 63 SQKDILEQARAAVDTYCRHNYGVVESFT-----VQRRVQPKVTVYPSKTQPLQHHNLLVC 117
Query: 85 TIAGYHVPAG--TRLFVN 100
+++G++ P R F+N
Sbjct: 118 SVSGFY-PGSIEVRWFLN 134
>pdb|2WBJ|B Chain B, Tcr Complex
pdb|2WBJ|F Chain F, Tcr Complex
Length = 200
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 25 NHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDC 84
+ D+L++A+ +DT+ V ES T +Q V+ + +YP+ + H ++ C
Sbjct: 63 SQKDILEQARAAVDTYCRHNYGVVESFT-----VQRRVQPKVTVYPSKTQPLQHHNLLVC 117
Query: 85 TIAGYHVPAG--TRLFVN 100
+++G++ P R F+N
Sbjct: 118 SVSGFY-PGSIEVRWFLN 134
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 53/151 (35%), Gaps = 30/151 (19%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L++ G +TT+ + + +L+H D L + ++ L V+
Sbjct: 260 LLVAGHETTVNLIANGMYALLSHPDQLAALRADM------------------TLLDGAVE 301
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E LR + +E + G +PAG + V + R P + P+ F
Sbjct: 302 EMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF------ 355
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
D+R + FG G C G A
Sbjct: 356 ------DIRRDTAGHLAFGHGIHFCIGAPLA 380
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 53/151 (35%), Gaps = 30/151 (19%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L++ G +TT+ + + +L+H D L + ++ L V+
Sbjct: 260 LLVAGHETTVNLIANGMYALLSHPDQLAALRADM------------------TLLDGAVE 301
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E LR + +E + G +PAG + V + R P + P+ F
Sbjct: 302 EMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF------ 355
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
D+R + FG G C G A
Sbjct: 356 ------DIRRDTAGHLAFGHGIHFCIGAPLA 380
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 53/151 (35%), Gaps = 30/151 (19%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
L++ G +TT+ + + +L+H D L + ++ L V+
Sbjct: 260 LLVAGHETTVNLIANGMYALLSHPDQLAALRADM------------------TLLDGAVE 301
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
E LR + +E + G +PAG + V + R P + P+ F
Sbjct: 302 EMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF------ 355
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
D+R + FG G C G A
Sbjct: 356 ------DIRRDTAGHLAFGHGIHFCIGAPLA 380
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 30/152 (19%)
Query: 3 ALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIV 62
ALILGG +T + + + +L++ Q EL + ES K + +V
Sbjct: 241 ALILGGVETVAGMIGFGVLALLDN-----PGQIEL---------LFESPEKA----ERVV 282
Query: 63 KETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERF 122
E +R P +I+D I G + AG + +I RD + P+ R
Sbjct: 283 NELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRA 342
Query: 123 LTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
+ + FG G C G + A
Sbjct: 343 AVSD------------VGFGHGIHYCVGAALA 362
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 13/93 (13%)
Query: 62 VKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPER 121
V+E LR P ++ + E I + G + V I RD V++ P+ F P+R
Sbjct: 244 VEEALRFSPPVMRTI-RVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR 302
Query: 122 FLTTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
H + FGSG C G A
Sbjct: 303 TPNPH------------LSFGSGIHLCLGAPLA 323
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 31/151 (20%)
Query: 4 LILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVK 63
+++GG +TT TL+ +L H D ++D G ++++ + VK
Sbjct: 230 ILIGGDETTRHTLSGGTEQLLRHRDQWDALVADVDLLPGA--------IEEMLRWTSPVK 281
Query: 64 ETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFL 123
R A D G + AG ++ + D +V+ P+ FR +R
Sbjct: 282 NMCRTLTA-----------DTVFHGTELRAGEKIMLMFESANFDESVFGDPDNFRIDRNP 330
Query: 124 TTHKDIDVRGQNFELIPFGSGRRGCPGISFA 154
+H + FG G C G A
Sbjct: 331 NSH------------VAFGFGTHFCLGNQLA 349
>pdb|4FQX|B Chain B, Crystal Structure Of Hla-Dm Bound To Hla-Dr1
pdb|4GBX|B Chain B, Crystal Structure Of An Immune Complex At Ph 6.5
Length = 208
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 28 DVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDCTIA 87
D+L++ + +DT+ V ES T +Q V+ + +YP+ + H ++ C+++
Sbjct: 72 DLLEQRRAAVDTYCRHNYGVGESFT-----VQRRVEPKVTVYPSKTQPLQHHNLLVCSVS 126
Query: 88 GYH 90
G++
Sbjct: 127 GFY 129
>pdb|4AH2|B Chain B, Hla-Dr1 With Covalently Linked Clip106-120 In Canonical
Orientation
Length = 229
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 25 NHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDC 84
+ D+L++ + +DT+ V ES T +Q V+ + +YP+ + H ++ C
Sbjct: 94 SQKDLLEQRRAAVDTYCRHNYGVGESFT-----VQRRVEPKVTVYPSKTQPLQHHNLLVC 148
Query: 85 TIAGYH 90
+++G++
Sbjct: 149 SVSGFY 154
>pdb|1DLH|B Chain B, Crystal Structure Of The Human Class Ii Mhc Protein
Hla-dr1 Complexed With An Influenza Virus Peptide
pdb|1DLH|E Chain E, Crystal Structure Of The Human Class Ii Mhc Protein
Hla-dr1 Complexed With An Influenza Virus Peptide
pdb|1KG0|B Chain B, Structure Of The Epstein-Barr Virus Gp42 Protein Bound To
The Mhc Class Ii Receptor Hla-Dr1
Length = 188
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 25 NHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDC 84
+ D+L++ + +DT+ V ES T +Q V+ + +YP+ + H ++ C
Sbjct: 61 SQKDLLEQRRAAVDTYCRHNYGVGESFT-----VQRRVEPKVTVYPSKTQPLQHHNLLVC 115
Query: 85 TIAGYH 90
+++G++
Sbjct: 116 SVSGFY 121
>pdb|3L6F|B Chain B, Structure Of Mhc Class Ii Molecule Hla-Dr1 Complexed With
Phosphopeptide Mart-1
pdb|3S4S|B Chain B, Crystal Structure Of Cd4 Mutant Bound To Hla-Dr1
pdb|3S4S|E Chain E, Crystal Structure Of Cd4 Mutant Bound To Hla-Dr1
pdb|3S5L|B Chain B, Crystal Structure Of Cd4 Mutant Bound To Hla-Dr1
pdb|3S5L|E Chain E, Crystal Structure Of Cd4 Mutant Bound To Hla-Dr1
Length = 193
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 25 NHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDC 84
+ D+L++ + +DT+ V ES T +Q V+ + +YP+ + H ++ C
Sbjct: 64 SQKDLLEQRRAAVDTYCRHNYGVGESFT-----VQRRVEPKVTVYPSKTQPLQHHNLLVC 118
Query: 85 TIAGYH 90
+++G++
Sbjct: 119 SVSGFY 124
>pdb|1SEB|B Chain B, Complex Of The Human Mhc Class Ii Glycoprotein Hla-Dr1 And
The Bacterial Superantigen Seb
pdb|1SEB|F Chain F, Complex Of The Human Mhc Class Ii Glycoprotein Hla-Dr1 And
The Bacterial Superantigen Seb
pdb|1FYT|B Chain B, Crystal Structure Of A Complex Of A Human AlphaBETA-T Cell
Receptor, Influenza Ha Antigen Peptide, And Mhc Class Ii
Molecule, Hla-Dr1
Length = 192
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 25 NHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDC 84
+ D+L++ + +DT+ V ES T +Q V+ + +YP+ + H ++ C
Sbjct: 63 SQKDLLEQRRAAVDTYCRHNYGVGESFT-----VQRRVEPKVTVYPSKTQPLQHHNLLVC 117
Query: 85 TIAGYH 90
+++G++
Sbjct: 118 SVSGFY 123
>pdb|1HXY|B Chain B, Crystal Structure Of Staphylococcal Enterotoxin H In
Complex With Human Mhc Class Ii
pdb|1KLG|B Chain B, Crystal Structure Of Hla-Dr1TPI(23-37, Thr28-->ile Mutant)
Complexed With Staphylococcal Enterotoxin C3 Variant 3b2
(Sec3-3b2)
pdb|1KLU|B Chain B, Crystal Structure Of Hla-Dr1TPI(23-37) Complexed With
Staphylococcal Enterotoxin C3 Variant 3b2 (Sec3-3b2)
pdb|1LO5|B Chain B, Crystal Structure Of The D227a Variant Of Staphylococcal
Enterotoxin A In Complex With Human Mhc Class Ii
pdb|1JWM|B Chain B, Crystal Structure Of The Complex Of The Mhc Class Ii
Molecule Hla-Dr1(Ha Peptide 306-318) With The
Superantigen Sec3
pdb|1JWS|B Chain B, Crystal Structure Of The Complex Of The Mhc Class Ii
Molecule Hla-Dr1 (Ha Peptide 306-318) With The
Superantigen Sec3 Variant 3b1
pdb|1JWU|B Chain B, Crystal Structure Of The Complex Of The Mhc Class Ii
Molecule Hla-Dr1 (Ha Peptide 306-318) With The
Superantigen Sec3 Variant 3b2
pdb|1PYW|B Chain B, Human Class Ii Mhc Protein Hla-Dr1 Bound To A Designed
Peptide Related To Influenza Virus Hemagglutinin,
Fvkqna(Maa)al, In Complex With Staphylococcal
Enterotoxin C3 Variant 3b2 (Sec3-3b2)
pdb|1R5I|B Chain B, Crystal Structure Of The Mam-Mhc Complex
pdb|1R5I|F Chain F, Crystal Structure Of The Mam-Mhc Complex
pdb|1SJE|B Chain B, Hla-Dr1 Complexed With A 16 Residue Hiv Capsid Peptide
Bound In A Hairpin Conformation
pdb|1SJH|B Chain B, Hla-Dr1 Complexed With A 13 Residue Hiv Capsid Peptide
pdb|1T5W|B Chain B, Hla-Dr1 In Complex With A Synthetic Peptide
(Aaysdqatplllspr)
pdb|1T5W|E Chain E, Hla-Dr1 In Complex With A Synthetic Peptide
(Aaysdqatplllspr)
pdb|1T5X|B Chain B, Hla-Dr1 In Complex With A Synthetic Peptide
(Aaysdqatplllspr) And The Superantigen Sec3-3b2
pdb|2G9H|B Chain B, Crystal Structure Of Staphylococcal Enterotoxin I (Sei) In
Complex With A Human Mhc Class Ii Molecule
pdb|2OJE|B Chain B, Mycoplasma Arthritidis-Derived Mitogen Complexed With
Class Ii Mhc Molecule Hla-Dr1HA COMPLEX IN THE PRESENCE
OF EDTA
pdb|2OJE|F Chain F, Mycoplasma Arthritidis-Derived Mitogen Complexed With
Class Ii Mhc Molecule Hla-Dr1HA COMPLEX IN THE PRESENCE
OF EDTA
pdb|2IAM|B Chain B, Structural Basis For Recognition Of Mutant Self By A
Tumor- Specific, Mhc Class Ii-Restricted Tcr
pdb|2IAN|B Chain B, Structural Basis For Recognition Of Mutant Self By A
Tumor- Specific, Mhc Class Ii-Restricted Tcr
pdb|2IAN|G Chain G, Structural Basis For Recognition Of Mutant Self By A
Tumor- Specific, Mhc Class Ii-Restricted Tcr
pdb|2IAN|L Chain L, Structural Basis For Recognition Of Mutant Self By A
Tumor- Specific, Mhc Class Ii-Restricted Tcr
pdb|2IAN|Q Chain Q, Structural Basis For Recognition Of Mutant Self By A
Tumor- Specific, Mhc Class Ii-Restricted Tcr
pdb|2ICW|B Chain B, Crystal Structure Of A Complete Ternary Complex Between
Tcr, Superantigen, And Peptide-Mhc Class Ii Molecule
pdb|2ICW|E Chain E, Crystal Structure Of A Complete Ternary Complex Between
Tcr, Superantigen, And Peptide-Mhc Class Ii Molecule
pdb|2IPK|B Chain B, Crystal Structure Of The Mhc Class Ii Molecule Hla-Dr1 In
Complex With The Fluorogenic Peptide, Acpkxvkqntlklat
(X3-
[5-(Dimethylamino)-1,3-Dioxo-1,
3-Dihydro-2h-Isoindol-2-Yl]- L-Alanine) And The
Superantigen, Sec3 Variant 3b2
pdb|2XN9|E Chain E, Crystal Structure Of The Ternary Complex Between Human T
Cell Receptor, Staphylococcal Enterotoxin H And Human
Major Histocompatibility Complex Class Ii
pdb|3QXA|B Chain B, Hla-Dr1 Bound With Clip Peptide
pdb|3QXA|E Chain E, Hla-Dr1 Bound With Clip Peptide
pdb|3QXD|B Chain B, F54c Hla-Dr1 Bound With Clip Peptide
pdb|3QXD|E Chain E, F54c Hla-Dr1 Bound With Clip Peptide
pdb|4E41|B Chain B, Structural Basis For The Recognition Of Mutant Self By A
Tumor- Specific, Mhc Class Ii-Restricted T Cell Receptor
G4
pdb|4E41|G Chain G, Structural Basis For The Recognition Of Mutant Self By A
Tumor- Specific, Mhc Class Ii-Restricted T Cell Receptor
G4
Length = 190
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 25 NHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDC 84
+ D+L++ + +DT+ V ES T +Q V+ + +YP+ + H ++ C
Sbjct: 63 SQKDLLEQRRAAVDTYCRHNYGVGESFT-----VQRRVEPKVTVYPSKTQPLQHHNLLVC 117
Query: 85 TIAGYH 90
+++G++
Sbjct: 118 SVSGFY 123
>pdb|3O6F|B Chain B, Crystal Structure Of A Human Autoimmune Tcr Ms2-3c8 Bound
To Mhc Class Ii Self-Ligand MbpHLA-Dr4
pdb|3O6F|F Chain F, Crystal Structure Of A Human Autoimmune Tcr Ms2-3c8 Bound
To Mhc Class Ii Self-Ligand MbpHLA-Dr4
pdb|3T0E|B Chain B, Crystal Structure Of A Complete Ternary Complex Of T Cell
Receptor, Peptide-Mhc And Cd4
Length = 221
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 28 DVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDCTIA 87
D+L++ + +DT+ V ES T +Q V + +YPA + H ++ C++
Sbjct: 95 DLLEQKRAAVDTYCRHNYGVGESFT-----VQRRVYPEVTVYPAKTQPLQHHNLLVCSVN 149
Query: 88 GYH 90
G++
Sbjct: 150 GFY 152
>pdb|3PDO|B Chain B, Crystal Structure Of Hla-Dr1 With Clip102-120
pdb|3PGC|B Chain B, Crystal Structure Of Hla-Dr1 With Clip106-120, Flipped
Peptide Orientation
pdb|3PGC|E Chain E, Crystal Structure Of Hla-Dr1 With Clip106-120, Flipped
Peptide Orientation
pdb|3PGD|B Chain B, Crystal Structure Of Hla-Dr1 With Clip106-120, Canonical
Peptide Orientation
pdb|3PGD|E Chain E, Crystal Structure Of Hla-Dr1 With Clip106-120, Canonical
Peptide Orientation
pdb|4AEN|B Chain B, Hla-Dr1 With Covalently Linked Clip106-120 In Reversed
Orientation
Length = 199
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 25 NHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDC 84
+ D+L++ + +DT+ V ES T +Q V+ + +YP+ + H ++ C
Sbjct: 64 SQKDLLEQRRAAVDTYCRHNYGVGESFT-----VQRRVEPKVTVYPSKTQPLQHHNLLVC 118
Query: 85 TIAGYH 90
+++G++
Sbjct: 119 SVSGFY 124
>pdb|1AQD|B Chain B, Hla-Dr1 (Dra, Drb1 0101) Human Class Ii Histocompatibility
Protein (Extracellular Domain) Complexed With Endogenous
Peptide
pdb|1AQD|E Chain E, Hla-Dr1 (Dra, Drb1 0101) Human Class Ii Histocompatibility
Protein (Extracellular Domain) Complexed With Endogenous
Peptide
pdb|1AQD|H Chain H, Hla-Dr1 (Dra, Drb1 0101) Human Class Ii Histocompatibility
Protein (Extracellular Domain) Complexed With Endogenous
Peptide
pdb|1AQD|K Chain K, Hla-Dr1 (Dra, Drb1 0101) Human Class Ii Histocompatibility
Protein (Extracellular Domain) Complexed With Endogenous
Peptide
Length = 198
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 25 NHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDC 84
+ D+L++ + +DT+ V ES T +Q V+ + +YP+ + H ++ C
Sbjct: 63 SQKDLLEQRRAAVDTYCRHNYGVGESFT-----VQRRVEPKVTVYPSKTQPLQHHNLLVC 117
Query: 85 TIAGYH 90
+++G++
Sbjct: 118 SVSGFY 123
>pdb|4H1L|B Chain B, Tcr Interaction With Peptide Mimics Of Nickel Offers
Structural Insights In Nickel Contact Allergy
pdb|4H1L|E Chain E, Tcr Interaction With Peptide Mimics Of Nickel Offers
Structural Insights In Nickel Contact Allergy
Length = 187
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 28 DVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDCTIA 87
D+L++ + ++D + V ES T +Q V + +YPA + H ++ C+++
Sbjct: 63 DLLEQKRGQVDNYCRHNYGVVESFT-----VQRRVHPQVTVYPAKTQPLQHHNLLVCSVS 117
Query: 88 GYH 90
G++
Sbjct: 118 GFY 120
>pdb|3C5J|B Chain B, Crystal Structure Of Hla Dr52c
Length = 190
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 28 DVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDCTIA 87
D+L++ + ++D + V ES T +Q V + +YPA + H ++ C+++
Sbjct: 66 DLLEQKRGQVDNYCRHNYGVVESFT-----VQRRVHPQVTVYPAKTQPLQHHNLLVCSVS 120
Query: 88 GYH 90
G++
Sbjct: 121 GFY 123
>pdb|2Q6W|B Chain B, The Structure Of Hla-Dra, Drb30101 (Dr52a) With Bound
Platelet Integrin Peptide Associated With Fetal And
Neonatal Alloimmune Thrombocytopenia
pdb|2Q6W|E Chain E, The Structure Of Hla-Dra, Drb30101 (Dr52a) With Bound
Platelet Integrin Peptide Associated With Fetal And
Neonatal Alloimmune Thrombocytopenia
Length = 190
Score = 26.9 bits (58), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 28 DVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDCTIA 87
D+L++ + +D + V ES T +Q V + +YPA + H ++ C+++
Sbjct: 66 DLLEQKRGRVDNYCRHNYGVGESFT-----VQRRVHPQVTVYPAKTQPLQHHNLLVCSVS 120
Query: 88 GYH 90
G++
Sbjct: 121 GFY 123
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 71 ATPLSV-PHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEF 117
ATP+S ++ED + G + G R+ ++ D V+E P+ F
Sbjct: 293 ATPVSAFQRTALEDVELGGVQIKKGQRVVMSYRSANFDEEVFEDPHTF 340
>pdb|1FV1|B Chain B, Structural Basis For The Binding Of An Immunodominant
Peptide From Myelin Basic Protein In Different Registers
By Two Hla-Dr2 Alleles
pdb|1FV1|E Chain E, Structural Basis For The Binding Of An Immunodominant
Peptide From Myelin Basic Protein In Different Registers
By Two Hla-Dr2 Alleles
pdb|1HQR|B Chain B, Crystal Structure Of A Superantigen Bound To The High-
Affinity, Zinc-Dependent Site On Mhc Class Ii
pdb|1H15|B Chain B, X-Ray Crystal Structure Of Hla-Dra10101DRB50101 Complexed
With A Peptide From Epstein Barr Virus Dna Polymerase
pdb|1H15|E Chain E, X-Ray Crystal Structure Of Hla-Dra10101DRB50101 Complexed
With A Peptide From Epstein Barr Virus Dna Polymerase
Length = 190
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 28 DVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDCTIA 87
D L+ + +DT+ V ES T +Q V+ + +YPA ++ H ++ C++
Sbjct: 66 DFLEDRRAAVDTYCRHNYGVGESFT-----VQRRVEPKVTVYPARTQTLQHHNLLVCSVN 120
Query: 88 GYH 90
G++
Sbjct: 121 GFY 123
>pdb|1ZGL|B Chain B, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a
pdb|1ZGL|E Chain E, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a
pdb|1ZGL|H Chain H, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a
pdb|1ZGL|K Chain K, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a
Length = 192
Score = 26.6 bits (57), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 28 DVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIEDCTIA 87
D L+ + +DT+ V ES T +Q V+ + +YPA ++ H ++ C++
Sbjct: 66 DFLEDRRAAVDTYCRHNYGVGESFT-----VQRRVEPKVTVYPARTQTLQHHNLLVCSVN 120
Query: 88 GYH 90
G++
Sbjct: 121 GFY 123
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,306,785
Number of Sequences: 62578
Number of extensions: 253018
Number of successful extensions: 651
Number of sequences better than 100.0: 182
Number of HSP's better than 100.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 432
Number of HSP's gapped (non-prelim): 183
length of query: 209
length of database: 14,973,337
effective HSP length: 94
effective length of query: 115
effective length of database: 9,091,005
effective search space: 1045465575
effective search space used: 1045465575
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)