Query 028420
Match_columns 209
No_of_seqs 159 out of 1888
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 11:15:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028420.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028420hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158 Cytochrome P450 CYP3/C 100.0 7.5E-52 1.6E-56 349.8 17.2 199 1-203 299-499 (499)
2 KOG0156 Cytochrome P450 CYP2 s 100.0 8.1E-51 1.8E-55 346.3 17.0 198 1-203 291-488 (489)
3 PLN02394 trans-cinnamate 4-mon 100.0 3.2E-50 6.9E-55 347.5 17.7 202 2-203 299-502 (503)
4 PLN02971 tryptophan N-hydroxyl 100.0 5.9E-50 1.3E-54 348.5 18.2 203 1-204 332-535 (543)
5 PTZ00404 cytochrome P450; Prov 100.0 1.4E-49 3.1E-54 341.8 17.2 193 2-202 289-482 (482)
6 PLN02183 ferulate 5-hydroxylas 100.0 1.9E-49 4.1E-54 343.6 17.9 204 2-207 310-516 (516)
7 PLN03234 cytochrome P450 83B1; 100.0 1.7E-49 3.8E-54 342.6 17.5 201 2-202 294-498 (499)
8 PLN00110 flavonoid 3',5'-hydro 100.0 1.6E-48 3.6E-53 336.7 17.9 203 2-204 295-498 (504)
9 PLN00168 Cytochrome P450; Prov 100.0 1.7E-48 3.7E-53 337.8 17.8 203 2-204 312-518 (519)
10 PLN03112 cytochrome P450 famil 100.0 4.6E-48 1E-52 334.8 18.6 206 2-207 302-512 (514)
11 PLN02738 carotene beta-ring hy 100.0 5.4E-48 1.2E-52 339.7 18.8 203 2-207 397-599 (633)
12 KOG0157 Cytochrome P450 CYP4/C 100.0 4.1E-48 8.8E-53 333.2 17.0 199 1-204 296-497 (497)
13 KOG0159 Cytochrome P450 CYP11/ 100.0 2.1E-48 4.5E-53 324.1 13.4 196 2-203 322-518 (519)
14 PLN02169 fatty acid (omega-1)- 100.0 6.3E-48 1.4E-52 332.7 16.9 192 2-203 307-500 (500)
15 PLN02966 cytochrome P450 83A1 100.0 1.4E-47 3E-52 331.0 18.6 197 2-202 295-497 (502)
16 PLN02290 cytokinin trans-hydro 100.0 1.5E-47 3.3E-52 331.7 16.8 194 2-204 322-516 (516)
17 PF00067 p450: Cytochrome P450 100.0 3E-48 6.4E-53 328.0 11.5 195 2-199 268-463 (463)
18 PLN02687 flavonoid 3'-monooxyg 100.0 3.1E-47 6.6E-52 329.9 17.9 202 2-203 303-509 (517)
19 PLN02500 cytochrome P450 90B1 100.0 2.3E-47 4.9E-52 328.8 17.0 195 2-201 285-488 (490)
20 PLN02426 cytochrome P450, fami 100.0 4.2E-47 9.1E-52 327.6 17.6 201 2-205 299-502 (502)
21 PLN03018 homomethionine N-hydr 100.0 8.3E-47 1.8E-51 327.7 18.5 202 2-204 320-525 (534)
22 PLN02655 ent-kaurene oxidase 100.0 6.3E-47 1.4E-51 324.2 17.1 198 2-204 268-465 (466)
23 PLN03195 fatty acid omega-hydr 100.0 6.7E-47 1.5E-51 327.7 15.3 197 2-203 298-516 (516)
24 PLN02936 epsilon-ring hydroxyl 100.0 2.2E-46 4.8E-51 322.5 17.0 199 2-203 284-482 (489)
25 PLN02774 brassinosteroid-6-oxi 100.0 2.7E-46 5.8E-51 320.1 16.7 190 2-201 270-462 (463)
26 PLN03141 3-epi-6-deoxocathaste 100.0 4.1E-46 8.8E-51 318.1 16.4 191 2-204 257-451 (452)
27 PLN02196 abscisic acid 8'-hydr 100.0 5.8E-45 1.3E-49 311.8 15.2 190 2-202 270-462 (463)
28 PLN02302 ent-kaurenoic acid ox 100.0 1.3E-44 2.8E-49 311.5 16.1 193 2-204 293-489 (490)
29 PLN02987 Cytochrome P450, fami 100.0 3.1E-44 6.7E-49 307.7 16.8 194 2-203 273-469 (472)
30 KOG0684 Cytochrome P450 [Secon 100.0 9.2E-44 2E-48 290.7 13.6 200 2-203 279-485 (486)
31 COG2124 CypX Cytochrome P450 [ 100.0 2.1E-39 4.6E-44 273.4 12.4 146 2-176 242-387 (411)
32 PLN02648 allene oxide synthase 100.0 1.2E-37 2.7E-42 266.5 13.5 166 6-177 282-463 (480)
33 PF09201 SRX: SRX; InterPro: 56.0 10 0.00023 27.0 2.2 24 146-169 18-41 (148)
34 PF05952 ComX: Bacillus compet 54.0 16 0.00034 21.9 2.4 24 18-41 4-27 (57)
35 PF08492 SRP72: SRP72 RNA-bind 53.3 11 0.00024 22.8 1.7 8 118-125 44-51 (59)
36 COG1759 5-formaminoimidazole-4 49.8 39 0.00084 28.0 4.8 70 58-162 275-351 (361)
37 PRK06789 flagellar motor switc 47.7 22 0.00049 22.5 2.5 40 61-100 21-62 (74)
38 PF12508 DUF3714: Protein of u 43.4 21 0.00045 27.4 2.3 44 54-99 51-94 (200)
39 PF14129 DUF4296: Domain of un 32.8 1.1E+02 0.0024 19.8 4.2 36 6-41 43-78 (87)
40 PF14550 Peptidase_U35_2: Puta 32.3 33 0.00073 24.0 1.7 30 79-111 72-101 (122)
41 KOG3506 40S ribosomal protein 29.8 25 0.00053 20.8 0.6 11 139-149 12-22 (56)
42 PRK05933 type III secretion sy 26.7 62 0.0013 26.8 2.6 43 58-100 317-362 (372)
43 PF11227 DUF3025: Protein of u 25.1 46 0.001 25.7 1.5 23 99-121 188-211 (212)
44 PF11138 DUF2911: Protein of u 24.8 65 0.0014 23.4 2.2 24 79-102 51-74 (145)
45 COG0851 MinE Septum formation 24.6 50 0.0011 21.7 1.4 33 11-43 13-52 (88)
46 COG2101 SPT15 TATA-box binding 24.6 25 0.00054 26.3 0.0 36 115-152 35-70 (185)
47 PF07849 DUF1641: Protein of u 24.5 1E+02 0.0022 17.0 2.5 19 16-34 12-30 (42)
48 PF14483 Cut8_M: Cut8 dimerisa 24.5 1.3E+02 0.0027 16.3 2.8 21 15-35 14-35 (38)
49 PHA03162 hypothetical protein; 22.3 55 0.0012 23.2 1.3 24 142-165 2-25 (135)
50 PF12444 Sox_N: Sox developmen 21.0 65 0.0014 21.0 1.4 20 156-175 60-79 (84)
51 PF15300 INT_SG_DDX_CT_C: INTS 20.9 47 0.001 20.5 0.7 14 56-69 41-54 (65)
52 PF13993 YccJ: YccJ-like prote 20.8 88 0.0019 19.0 1.8 32 6-37 8-40 (69)
53 PF10264 Stork_head: Winged he 20.6 1.6E+02 0.0035 19.0 3.1 39 13-51 13-53 (80)
54 PF08285 DPM3: Dolichol-phosph 20.5 1.5E+02 0.0032 19.6 3.0 26 15-40 55-80 (91)
55 PF14824 Sirohm_synth_M: Siroh 20.1 1.4E+02 0.0029 15.4 2.2 15 26-40 15-29 (30)
56 TIGR03779 Bac_Flav_CT_M Bacter 20.0 80 0.0017 27.1 2.1 20 81-100 279-298 (410)
No 1
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.5e-52 Score=349.76 Aligned_cols=199 Identities=32% Similarity=0.576 Sum_probs=177.9
Q ss_pred CeeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceec
Q 028420 1 MQALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHES 80 (209)
Q Consensus 1 ~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~ 80 (209)
|+.+++||+||||+++++++|+|++||++|+|||+||+++..+....+++.+.+++||++||+||||+||+++. ..|.+
T Consensus 299 afvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C 377 (499)
T KOG0158|consen 299 AFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNREC 377 (499)
T ss_pred HHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-cccee
Confidence 35689999999999999999999999999999999999997665559999999999999999999999999998 47999
Q ss_pred cccceec-cEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHHH
Q 028420 81 IEDCTIA-GYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLL 159 (209)
Q Consensus 81 ~~d~~i~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~ 159 (209)
++|++++ ++.|+||+.|.++.+++|+||++||||++|+||||.+++.. ..++.+|+|||.|||+|+|.+||.+|+|
T Consensus 378 ~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~---~~~~~~ylPFG~GPR~CIGmRfa~mq~K 454 (499)
T KOG0158|consen 378 TKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK---SRHPGAYLPFGVGPRNCIGMRFALMEAK 454 (499)
T ss_pred cCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc---ccCCccccCCCCCccccHHHHHHHHHHH
Confidence 9999999 99999999999999999999999999999999999977632 2367899999999999999999999999
Q ss_pred HHHHHHHhhceeecCCCCCCCCc-CccceeeccCcCeEEEEEecC
Q 028420 160 LTLASLLHGFEFATPGDEPLDMS-EGVGLTNLKATPLQVLLTPRL 203 (209)
Q Consensus 160 ~~l~~ll~~fd~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~R~ 203 (209)
++|++||++|+++..+.+..... ...+++..+..++++++++|.
T Consensus 455 ~~L~~lL~~f~~~~~~~t~~~~~~~~~~~~l~pk~gi~Lkl~~r~ 499 (499)
T KOG0158|consen 455 LALAHLLRNFSFEVCPTTIIPLEGDPKGFTLSPKGGIWLKLEPRD 499 (499)
T ss_pred HHHHHHHhhCEEecCCcccCcccCCccceeeecCCceEEEEEeCC
Confidence 99999999999999874322221 122566678888999999984
No 2
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.1e-51 Score=346.35 Aligned_cols=198 Identities=52% Similarity=0.895 Sum_probs=180.5
Q ss_pred CeeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceec
Q 028420 1 MQALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHES 80 (209)
Q Consensus 1 ~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~ 80 (209)
|+++++||+|||++++.|++.+|++||++|+|+++||+++++.+..++.++..++||++|+|+|++|++|++|+.++|.+
T Consensus 291 ~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~ 370 (489)
T KOG0156|consen 291 ILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRET 370 (489)
T ss_pred HHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccc
Confidence 45789999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred cccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHHHH
Q 028420 81 IEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLL 160 (209)
Q Consensus 81 ~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~ 160 (209)
.+|+.|+||.|||||.|+++.|++|+||++|+||++|+||||++++ + .+.....++|||.|+|.|+|..+|++++.+
T Consensus 371 ~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d--~~~~~~~~iPFG~GRR~CpG~~La~~~l~l 447 (489)
T KOG0156|consen 371 TEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-D--GKGLDFKLIPFGSGRRICPGEGLARAELFL 447 (489)
T ss_pred cCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-c--ccCCceEecCCCCCcCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999874 1 122578899999999999999999999999
Q ss_pred HHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEecC
Q 028420 161 TLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPRL 203 (209)
Q Consensus 161 ~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 203 (209)
+++.++++||++.+++ .+++... +.+...+.++.+...+|.
T Consensus 448 ~la~llq~F~w~~~~~-~~d~~e~-~~~~~~~~pl~~~~~~r~ 488 (489)
T KOG0156|consen 448 FLANLLQRFDWKLPGG-KVDMEEA-GLTLKKKKPLKAVPVPRL 488 (489)
T ss_pred HHHHHHheeeeecCCC-CCCCccc-ccceecCCcceeeeecCC
Confidence 9999999999999987 6666555 455566677777777764
No 3
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=3.2e-50 Score=347.50 Aligned_cols=202 Identities=42% Similarity=0.776 Sum_probs=176.3
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceecc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESI 81 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~~ 81 (209)
.++++||+|||+++++|++++|++||++|++|++|++++.+.+..++.+++.++||++|||+|++|++|+++...+|.+.
T Consensus 299 ~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~ 378 (503)
T PLN02394 299 ENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNL 378 (503)
T ss_pred HHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecC
Confidence 35679999999999999999999999999999999999988766678888999999999999999999999988789999
Q ss_pred ccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHHHHH
Q 028420 82 EDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLT 161 (209)
Q Consensus 82 ~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~ 161 (209)
+|++++|+.||+||.|.++.+++|+||++|+||++|+||||+++..+........+|+|||.|+|+|+|++||++|++++
T Consensus 379 ~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~ 458 (503)
T PLN02394 379 EDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIV 458 (503)
T ss_pred CCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999965422111223567999999999999999999999999
Q ss_pred HHHHHhhceeecCCCC-CCCCcCccc-eeeccCcCeEEEEEecC
Q 028420 162 LASLLHGFEFATPGDE-PLDMSEGVG-LTNLKATPLQVLLTPRL 203 (209)
Q Consensus 162 l~~ll~~fd~~~~~~~-~~~~~~~~~-~~~~~~~~~~v~~~~R~ 203 (209)
++.++++|++++.++. .++.....| +....+.++++++.||+
T Consensus 459 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 502 (503)
T PLN02394 459 LGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPRS 502 (503)
T ss_pred HHHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeecCC
Confidence 9999999999987664 344443343 44545679999999996
No 4
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=5.9e-50 Score=348.47 Aligned_cols=203 Identities=32% Similarity=0.690 Sum_probs=179.1
Q ss_pred CeeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceec
Q 028420 1 MQALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHES 80 (209)
Q Consensus 1 ~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~ 80 (209)
+.++++||+|||+++++|++++|++||++|+|+++||+++++.+..++.+++.++||++|||+|++|++|+++...+|.+
T Consensus 332 ~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~ 411 (543)
T PLN02971 332 IKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVA 411 (543)
T ss_pred HHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceec
Confidence 45789999999999999999999999999999999999999877788999999999999999999999999998678999
Q ss_pred cccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHHHH
Q 028420 81 IEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLL 160 (209)
Q Consensus 81 ~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~ 160 (209)
.+|+.++||.||||+.|.++.|++|+||++|+||++|+||||+++..+......+..|+|||.|+|+|+|++||+.|+++
T Consensus 412 ~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~ 491 (543)
T PLN02971 412 LSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTM 491 (543)
T ss_pred CCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997542211112356899999999999999999999999
Q ss_pred HHHHHHhhceeecCCCC-CCCCcCccceeeccCcCeEEEEEecCC
Q 028420 161 TLASLLHGFEFATPGDE-PLDMSEGVGLTNLKATPLQVLLTPRLH 204 (209)
Q Consensus 161 ~l~~ll~~fd~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~R~~ 204 (209)
+++.|+++|+++..++. .+++....+ +...+.++.+.+++|..
T Consensus 492 ~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 535 (543)
T PLN02971 492 MLARLLQGFKWKLAGSETRVELMESSH-DMFLSKPLVMVGELRLS 535 (543)
T ss_pred HHHHHHHhCEEEeCCCCCCcchhhhcC-cccccccceeeeeecCC
Confidence 99999999999987643 456655555 44355689999999943
No 5
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=1.4e-49 Score=341.82 Aligned_cols=193 Identities=30% Similarity=0.574 Sum_probs=172.4
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceecc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESI 81 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~~ 81 (209)
+++++||+|||+++++|++++|++||++|+|+++|++++++++..++.+++.++||+++|++|++|++|+++...+|.+.
T Consensus 289 ~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~ 368 (482)
T PTZ00404 289 LDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTS 368 (482)
T ss_pred HHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceecc
Confidence 46789999999999999999999999999999999999988766678889999999999999999999999875689999
Q ss_pred cccee-ccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHHHH
Q 028420 82 EDCTI-AGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLL 160 (209)
Q Consensus 82 ~d~~i-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~ 160 (209)
+|+++ +|+.||+|+.|.++.+++|+||++|+||++|+||||++.. ...+|+|||.|+|+|+|++||++|+++
T Consensus 369 ~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-------~~~~~~pFg~G~R~C~G~~~A~~e~~~ 441 (482)
T PTZ00404 369 NDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-------SNDAFMPFSIGPRNCVGQQFAQDELYL 441 (482)
T ss_pred CCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-------CCCceeccCCCCCCCccHHHHHHHHHH
Confidence 99999 9999999999999999999999999999999999998643 356899999999999999999999999
Q ss_pred HHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEec
Q 028420 161 TLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPR 202 (209)
Q Consensus 161 ~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R 202 (209)
+++.++++|+++..+++++......+.+.. +.++++.+++|
T Consensus 442 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R 482 (482)
T PTZ00404 442 AFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR 482 (482)
T ss_pred HHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence 999999999999876544333333445554 56789999887
No 6
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=1.9e-49 Score=343.57 Aligned_cols=204 Identities=44% Similarity=0.782 Sum_probs=178.7
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceecc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESI 81 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~~ 81 (209)
+++++||+|||+++++|++++|++||++|+|+++|++++++.+..++.+++.++||+++||+|++|++|+++.. .|.+.
T Consensus 310 ~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~ 388 (516)
T PLN02183 310 MDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETA 388 (516)
T ss_pred HHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeecc
Confidence 46789999999999999999999999999999999999988666678899999999999999999999999987 59999
Q ss_pred ccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHHHHH
Q 028420 82 EDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLT 161 (209)
Q Consensus 82 ~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~ 161 (209)
+|++++|+.||||+.|.++.+++|+||++|+||++|+||||++++.. ........|+|||.|+|+|+|++||++|++++
T Consensus 389 ~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~-~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~ 467 (516)
T PLN02183 389 EDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVP-DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLA 467 (516)
T ss_pred CceeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCc-cccCCcceecCCCCCCCCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999965421 11124568999999999999999999999999
Q ss_pred HHHHHhhceeecCCCCC---CCCcCccceeeccCcCeEEEEEecCCCCC
Q 028420 162 LASLLHGFEFATPGDEP---LDMSEGVGLTNLKATPLQVLLTPRLHAPL 207 (209)
Q Consensus 162 l~~ll~~fd~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~R~~~~~ 207 (209)
++.|+++|+++..++.. ......++.+.+...++.+.+++|..||+
T Consensus 468 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 516 (516)
T PLN02183 468 VAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPTYRLQCPL 516 (516)
T ss_pred HHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEeecCCCCCC
Confidence 99999999999876532 32223345554567789999999999985
No 7
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=1.7e-49 Score=342.59 Aligned_cols=201 Identities=39% Similarity=0.715 Sum_probs=175.7
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceecc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESI 81 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~~ 81 (209)
+++++||+|||+++++|++++|++||++|+++++|++++.++....+.+++.++||+++||+|++|++|+++...+|.+.
T Consensus 294 ~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~ 373 (499)
T PLN03234 294 LDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETI 373 (499)
T ss_pred HHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccC
Confidence 46899999999999999999999999999999999999988766788899999999999999999999999986679999
Q ss_pred ccceeccEEeCCCCEEEEcccccccCCCCC-CCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHHHH
Q 028420 82 EDCTIAGYHVPAGTRLFVNIPKIQRDPNVW-EKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLL 160 (209)
Q Consensus 82 ~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~ 160 (209)
+|++++|+.||+||.|.++.+++|+||++| +||++||||||+++............|+|||.|+|+|+|+++|++|+++
T Consensus 374 ~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~ 453 (499)
T PLN03234 374 ADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEI 453 (499)
T ss_pred CCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHH
Confidence 999999999999999999999999999999 8999999999997543212223466899999999999999999999999
Q ss_pred HHHHHHhhceeecCCCC---CCCCcCccceeeccCcCeEEEEEec
Q 028420 161 TLASLLHGFEFATPGDE---PLDMSEGVGLTNLKATPLQVLLTPR 202 (209)
Q Consensus 161 ~l~~ll~~fd~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~R 202 (209)
+++.++++|+++++++. .+......|+...++.++.+.+++|
T Consensus 454 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (499)
T PLN03234 454 PFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH 498 (499)
T ss_pred HHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence 99999999999998752 2344445677776777776666655
No 8
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=1.6e-48 Score=336.73 Aligned_cols=203 Identities=47% Similarity=0.848 Sum_probs=178.6
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceecc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESI 81 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~~ 81 (209)
+++++||+|||+++++|++++|++||++|+|+++|++++.+.+..++.+++.++||+++||+|++|++|+++...+|.+.
T Consensus 295 ~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~ 374 (504)
T PLN00110 295 LNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVST 374 (504)
T ss_pred HhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccC
Confidence 56899999999999999999999999999999999999988766788899999999999999999999999986689999
Q ss_pred ccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCc-cccCCCCcccccCCCCCCCccHHHHHHHHHH
Q 028420 82 EDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDI-DVRGQNFELIPFGSGRRGCPGISFALQVLLL 160 (209)
Q Consensus 82 ~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~-~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~ 160 (209)
+|++++|+.||+|+.|.++.+++|+||++|+||++|+|+||+++.... .......+++|||.|+|.|+|++||+.|+++
T Consensus 375 ~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~ 454 (504)
T PLN00110 375 QACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEY 454 (504)
T ss_pred CCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999653211 1111235799999999999999999999999
Q ss_pred HHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEecCC
Q 028420 161 TLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPRLH 204 (209)
Q Consensus 161 ~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 204 (209)
+++.++++||+++.++.+.+.....+.+..+..++++++++|.+
T Consensus 455 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 498 (504)
T PLN00110 455 ILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRLH 498 (504)
T ss_pred HHHHHHHhceeecCCCCccCcccccccccccCCCceEeeccCCC
Confidence 99999999999987765444433456666678899999999963
No 9
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=1.7e-48 Score=337.81 Aligned_cols=203 Identities=33% Similarity=0.628 Sum_probs=175.8
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCC-CCCCccccCCCccHHHHHHHHccCCCCCCCCcceec
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRE-RQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHES 80 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~ 80 (209)
+++++||+|||+++++|++++|++||++|+|+++|++++++.+ ..++.+++.++||+++|++|++|++|+++..++|.+
T Consensus 312 ~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~ 391 (519)
T PLN00168 312 SEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKA 391 (519)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccC
Confidence 4678999999999999999999999999999999999998753 567888999999999999999999999988778999
Q ss_pred cccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCc--c-ccCCCCcccccCCCCCCCccHHHHHHH
Q 028420 81 IEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDI--D-VRGQNFELIPFGSGRRGCPGISFALQV 157 (209)
Q Consensus 81 ~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~--~-~~~~~~~~~~Fg~G~~~C~G~~lA~~e 157 (209)
.+|++++|+.||||+.|.++.+++|+||++|+||++|+|+||+++.... . ....+..|+|||.|+|+|+|++||++|
T Consensus 392 ~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e 471 (519)
T PLN00168 392 AEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLH 471 (519)
T ss_pred CCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999743110 0 111346799999999999999999999
Q ss_pred HHHHHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEecCC
Q 028420 158 LLLTLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPRLH 204 (209)
Q Consensus 158 ~~~~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 204 (209)
++++++.|+++|++++.++.+++.....++...++.++.+.+++|+.
T Consensus 472 ~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~ 518 (519)
T PLN00168 472 LEYFVANMVREFEWKEVPGDEVDFAEKREFTTVMAKPLRARLVPRRT 518 (519)
T ss_pred HHHHHHHHHHHccceeCCCCcCChhhhceeEEeecCCcEEEEEeccC
Confidence 99999999999999987654444333334455566789999999975
No 10
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=4.6e-48 Score=334.81 Aligned_cols=206 Identities=41% Similarity=0.773 Sum_probs=179.2
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceecc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESI 81 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~~ 81 (209)
+++++||+|||+++++|++++|++||++|+++++|++++++++..++.+++.++||++++|+|++|++|+++...+|.+.
T Consensus 302 ~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~ 381 (514)
T PLN03112 302 QDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESL 381 (514)
T ss_pred HHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccC
Confidence 56889999999999999999999999999999999999988777788999999999999999999999999976679999
Q ss_pred ccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCc-c-ccCCCCcccccCCCCCCCccHHHHHHHHH
Q 028420 82 EDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDI-D-VRGQNFELIPFGSGRRGCPGISFALQVLL 159 (209)
Q Consensus 82 ~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~-~-~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~ 159 (209)
+|++++|+.||||+.|.++.+++|+||++|+||++|||+||+.+.+.. . ....+.+|+|||.|+|+|+|++||++|++
T Consensus 382 ~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~ 461 (514)
T PLN03112 382 RATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVL 461 (514)
T ss_pred CCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHH
Confidence 999999999999999999999999999999999999999987543211 1 11235689999999999999999999999
Q ss_pred HHHHHHHhhceeecCCCC---CCCCcCccceeeccCcCeEEEEEecCCCCC
Q 028420 160 LTLASLLHGFEFATPGDE---PLDMSEGVGLTNLKATPLQVLLTPRLHAPL 207 (209)
Q Consensus 160 ~~l~~ll~~fd~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~R~~~~~ 207 (209)
++++.++++||+++.++. ++......++..++..++.++++||.....
T Consensus 462 ~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 512 (514)
T PLN03112 462 MALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRLAPHL 512 (514)
T ss_pred HHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCCcccc
Confidence 999999999999987542 233333446666677899999999976544
No 11
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=5.4e-48 Score=339.71 Aligned_cols=203 Identities=30% Similarity=0.582 Sum_probs=175.8
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceecc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESI 81 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~~ 81 (209)
+++++||+|||+++++|++++|++||++|+||++|+++++++ ..++.+++.++|||+|||+|+|||+|+++.. .|.+.
T Consensus 397 ~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~-~R~a~ 474 (633)
T PLN02738 397 MTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPVL-IRRSL 474 (633)
T ss_pred HHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCcccc-ceeec
Confidence 467899999999999999999999999999999999999874 5678899999999999999999999999986 58899
Q ss_pred ccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHHHHH
Q 028420 82 EDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLT 161 (209)
Q Consensus 82 ~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~ 161 (209)
+|.+++||.||+||.|.++.+.+|+||++|+||++|+||||+..............|+|||.|+|+|+|++||++|++++
T Consensus 475 ~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~ 554 (633)
T PLN02738 475 ENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVA 554 (633)
T ss_pred cCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999853211111224568999999999999999999999999
Q ss_pred HHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEecCCCCC
Q 028420 162 LASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPRLHAPL 207 (209)
Q Consensus 162 l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~~~~ 207 (209)
++.|+++|++++.++.+ +.....+.+..+..++++.+++|...+.
T Consensus 555 LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~~~~~ 599 (633)
T PLN02738 555 TAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRTKPPV 599 (633)
T ss_pred HHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECCCCCC
Confidence 99999999999876532 2222234556677899999999977664
No 12
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=4.1e-48 Score=333.15 Aligned_cols=199 Identities=35% Similarity=0.663 Sum_probs=173.8
Q ss_pred CeeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCC-CCccccCCCccHHHHHHHHccCCCCCCCCccee
Q 028420 1 MQALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQ-VNESDTKKLVYLQAIVKETLRLYPATPLSVPHE 79 (209)
Q Consensus 1 ~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~ 79 (209)
+.+|++||+|||+++++|+++.|+.||++|+++++|+.++++++.. .+.....+++|+++||+|+|||||++|.. .|.
T Consensus 296 v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~-~R~ 374 (497)
T KOG0157|consen 296 VDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLV-ARK 374 (497)
T ss_pred HHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchh-hcc
Confidence 4578999999999999999999999999999999999999975433 23333346999999999999999999987 699
Q ss_pred ccccceec-cEEeCCCCEEEEcccccccCCCCCC-CCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHH
Q 028420 80 SIEDCTIA-GYHVPAGTRLFVNIPKIQRDPNVWE-KPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQV 157 (209)
Q Consensus 80 ~~~d~~i~-g~~ip~g~~v~~~~~~~~~d~~~~~-~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e 157 (209)
+.+|++++ |+.||||+.|.++++++|||+.+|+ ||++|||+||+++.... ..++++|+|||+|+|.|+|++||++|
T Consensus 375 ~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~--~~~~~~fipFsaGpR~CiG~~fA~le 452 (497)
T KOG0157|consen 375 ATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKA--KRHPFAFIPFSAGPRNCIGQKFAMLE 452 (497)
T ss_pred cCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcC--CCCCccccCCCCCcccchhHHHHHHH
Confidence 99999995 8999999999999999999999996 99999999999754221 23578999999999999999999999
Q ss_pred HHHHHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEecCC
Q 028420 158 LLLTLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPRLH 204 (209)
Q Consensus 158 ~~~~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 204 (209)
++++++.++++|++++..+.. .......+.++..+++|++++|..
T Consensus 453 mKv~l~~ll~~f~~~~~~~~~--~~~~~~~~l~~~~gl~v~~~~r~~ 497 (497)
T KOG0157|consen 453 MKVVLAHLLRRFRIEPVGGDK--PKPVPELTLRPKNGLKVKLRPRGS 497 (497)
T ss_pred HHHHHHHHHHheEEEecCCCC--ceeeeEEEEEecCCeEEEEEeCCC
Confidence 999999999999999876643 334556777889999999999963
No 13
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-48 Score=324.06 Aligned_cols=196 Identities=33% Similarity=0.528 Sum_probs=179.5
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCC-CCCCCccccCCCccHHHHHHHHccCCCCCCCCcceec
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGR-ERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHES 80 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~ 80 (209)
+++++||.|||+.++.|++|+|++||+.|++|++|+.+++.+ +...+.+.+.++|||+|||||++|+||.++.. .|+.
T Consensus 322 ~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~-~R~l 400 (519)
T KOG0159|consen 322 MDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN-GRVL 400 (519)
T ss_pred HHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc-cccc
Confidence 578999999999999999999999999999999999999887 67788899999999999999999999999987 6999
Q ss_pred cccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHHHH
Q 028420 81 IEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLL 160 (209)
Q Consensus 81 ~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~ 160 (209)
.+|..++||.|||||.|.+..+.+.+||++|++|++|+|+||++++. ...+++.++|||.|+|+|+|++||.+|+.+
T Consensus 401 ~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~---~~~~pF~~LPFGfG~R~C~GRRiAElEl~l 477 (519)
T KOG0159|consen 401 PKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST---KTIHPFASLPFGFGPRMCLGRRIAELELHL 477 (519)
T ss_pred chhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccccc---CCCCCceecCCCCCccccchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998873 234789999999999999999999999999
Q ss_pred HHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEecC
Q 028420 161 TLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPRL 203 (209)
Q Consensus 161 ~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 203 (209)
+|++++++|+++...++++. ....++..|..++.+++++|.
T Consensus 478 lLarllr~f~V~~~~~~pv~--~~~~~il~P~~~l~f~f~~r~ 518 (519)
T KOG0159|consen 478 LLARLLRNFKVEFLHEEPVE--YVYRFILVPNRPLRFKFRPRN 518 (519)
T ss_pred HHHHHHHhcceeecCCCCcc--ceeEEEEcCCCCcceeeeeCC
Confidence 99999999999998765554 344466678899999999884
No 14
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=6.3e-48 Score=332.73 Aligned_cols=192 Identities=27% Similarity=0.525 Sum_probs=165.3
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceecc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESI 81 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~~ 81 (209)
.++++||+|||+++++|++++|++||++|+|+++|+++++ +.+++.++||+++|++|++|++|+++... |.+.
T Consensus 307 ~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~ 379 (500)
T PLN02169 307 FSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPA 379 (500)
T ss_pred HHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecC
Confidence 4689999999999999999999999999999999998764 56788999999999999999999999874 6655
Q ss_pred ccce-eccEEeCCCCEEEEcccccccCCCCC-CCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHHH
Q 028420 82 EDCT-IAGYHVPAGTRLFVNIPKIQRDPNVW-EKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLL 159 (209)
Q Consensus 82 ~d~~-i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~ 159 (209)
+|.. ++|+.||||+.|.++.|++||||++| +||++|+||||+++++... ...+.+|+|||+|+|+|+|++||++|++
T Consensus 380 ~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~-~~~~~~~lPFG~GpR~CiG~~~A~~e~k 458 (500)
T PLN02169 380 KPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLR-HEPSYKFMAFNSGPRTCLGKHLALLQMK 458 (500)
T ss_pred CCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCcc-CCCCccccCCCCCCCCCcCHHHHHHHHH
Confidence 5544 59999999999999999999999999 8999999999996543211 1136789999999999999999999999
Q ss_pred HHHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEecC
Q 028420 160 LTLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPRL 203 (209)
Q Consensus 160 ~~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 203 (209)
++++.|+++|+++..++.++. ...+.+..+..++.+++++|.
T Consensus 459 ~~la~ll~~f~~~~~~~~~~~--~~~~~~l~~~~gl~l~l~~~~ 500 (500)
T PLN02169 459 IVALEIIKNYDFKVIEGHKIE--AIPSILLRMKHGLKVTVTKKI 500 (500)
T ss_pred HHHHHHHHHCEEEEcCCCCcc--cccceEEecCCCEEEEEEeCC
Confidence 999999999999987654332 233456667889999999873
No 15
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=1.4e-47 Score=330.97 Aligned_cols=197 Identities=42% Similarity=0.754 Sum_probs=168.9
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCC--CCCCccccCCCccHHHHHHHHccCCCCCCCCccee
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRE--RQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHE 79 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~--~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~ 79 (209)
+++++||+|||+++++|++++|++||++|+|+++|+.++++.+ ...+.+++.++||++|+|+|++|++|+++...+|.
T Consensus 295 ~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~ 374 (502)
T PLN02966 295 LDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRA 374 (502)
T ss_pred HHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcc
Confidence 4689999999999999999999999999999999999998743 34688899999999999999999999999866799
Q ss_pred ccccceeccEEeCCCCEEEEcccccccCCCCC-CCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHH
Q 028420 80 SIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVW-EKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVL 158 (209)
Q Consensus 80 ~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~ 158 (209)
+.+|++++|+.||+||.|.++.+++||||++| ++|++|+||||+++..+ ....+..|+|||.|+|+|+|++||++|+
T Consensus 375 ~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~--~~~~~~~~~pFg~G~R~C~G~~~A~~el 452 (502)
T PLN02966 375 CIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVD--FKGTDYEFIPFGSGRRMCPGMRLGAAML 452 (502)
T ss_pred cCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCC--cCCCcCCccCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999 99999999999965421 1123568999999999999999999999
Q ss_pred HHHHHHHHhhceeecCCCC---CCCCcCccceeeccCcCeEEEEEec
Q 028420 159 LLTLASLLHGFEFATPGDE---PLDMSEGVGLTNLKATPLQVLLTPR 202 (209)
Q Consensus 159 ~~~l~~ll~~fd~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~R 202 (209)
+++++.++++|+++..++. .++.+...|....++..+. +++|
T Consensus 453 ~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 497 (502)
T PLN02966 453 EVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLK--LVPE 497 (502)
T ss_pred HHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeE--EEEE
Confidence 9999999999999987663 2333344466554444554 4444
No 16
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=1.5e-47 Score=331.73 Aligned_cols=194 Identities=29% Similarity=0.525 Sum_probs=171.9
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceecc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESI 81 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~~ 81 (209)
+++++||+|||+++++|++++|++||++|+|+++|++++++.+ .++.+++.++||++|||+|++|++|+++. .+|.+.
T Consensus 322 ~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~ 399 (516)
T PLN02290 322 KTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAF 399 (516)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeec
Confidence 4678999999999999999999999999999999999998864 67888999999999999999999999986 489999
Q ss_pred ccceeccEEeCCCCEEEEcccccccCCCCC-CCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHHHH
Q 028420 82 EDCTIAGYHVPAGTRLFVNIPKIQRDPNVW-EKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLL 160 (209)
Q Consensus 82 ~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~ 160 (209)
+|++++|+.||+|+.|.++.+++|+||++| +||++|+||||++... .....|+|||.|+|+|+|++||++|+++
T Consensus 400 ~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~-----~~~~~~~pFG~G~R~C~G~~lA~~el~l 474 (516)
T PLN02290 400 EDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF-----APGRHFIPFAAGPRNCIGQAFAMMEAKI 474 (516)
T ss_pred CCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC-----CCCCeEecCCCCCCCCccHHHHHHHHHH
Confidence 999999999999999999999999999999 8999999999995421 1345799999999999999999999999
Q ss_pred HHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEecCC
Q 028420 161 TLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPRLH 204 (209)
Q Consensus 161 ~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 204 (209)
+++.|+++|++++.++... ....+.+..+..++++++++|.+
T Consensus 475 ~la~ll~~f~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~ 516 (516)
T PLN02290 475 ILAMLISKFSFTISDNYRH--APVVVLTIKPKYGVQVCLKPLNP 516 (516)
T ss_pred HHHHHHHhceEeeCCCccc--CccceeeecCCCCCeEEEEeCCC
Confidence 9999999999998765221 12224666778899999999863
No 17
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=3e-48 Score=328.00 Aligned_cols=195 Identities=38% Similarity=0.695 Sum_probs=167.1
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceecc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESI 81 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~~ 81 (209)
+.+++||+|||+.+++|++++|++||++|+++++|++++.+++...+.+++.++||++|||+|++|++|+++..++|.+.
T Consensus 268 ~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~ 347 (463)
T PF00067_consen 268 LTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVAT 347 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEES
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 46789999999999999999999999999999999999997667788899999999999999999999999955689999
Q ss_pred ccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHHHHH
Q 028420 82 EDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLT 161 (209)
Q Consensus 82 ~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~ 161 (209)
+|++++|+.||+|+.|.++.+++|+||++|+||++|+|+||++... ........|+|||.|+|.|+|++||++|++++
T Consensus 348 ~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~ 425 (463)
T PF00067_consen 348 EDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERG--ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVF 425 (463)
T ss_dssp SSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTS--TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998764 11235788999999999999999999999999
Q ss_pred HHHHHhhceeecCCCCCCCCcCcc-ceeeccCcCeEEEE
Q 028420 162 LASLLHGFEFATPGDEPLDMSEGV-GLTNLKATPLQVLL 199 (209)
Q Consensus 162 l~~ll~~fd~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~ 199 (209)
++.++++||+++.++......... ++.. ++.++.|.|
T Consensus 426 la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 463 (463)
T PF00067_consen 426 LAKLLRRFDFELVPGSEPEPQEQQNGFLL-PPKPLKVKF 463 (463)
T ss_dssp HHHHHHHEEEEESTTSSGGEEECSCSSSE-EESSSEEEE
T ss_pred HHHHHHhCEEEECCCCCCCCccccCceEe-eCCCcEEeC
Confidence 999999999999765433222221 3443 455666654
No 18
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=3.1e-47 Score=329.88 Aligned_cols=202 Identities=50% Similarity=0.891 Sum_probs=175.1
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceecc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESI 81 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~~ 81 (209)
+++++||+|||+++++|++++|++||++|+++++|++++.+.+..++.+++.++||++++|+|++|++|+++...+|.+.
T Consensus 303 ~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~ 382 (517)
T PLN02687 303 LNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAA 382 (517)
T ss_pred HHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCC
Confidence 46789999999999999999999999999999999999988777788899999999999999999999999976689999
Q ss_pred ccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCc--cccCCCCcccccCCCCCCCccHHHHHHHHH
Q 028420 82 EDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDI--DVRGQNFELIPFGSGRRGCPGISFALQVLL 159 (209)
Q Consensus 82 ~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~--~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~ 159 (209)
+|++++|+.||+|+.|.++.+++|+||++|+||++|+|+||++..... .....+..|+|||.|+|.|+|++||++|++
T Consensus 383 ~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~ 462 (517)
T PLN02687 383 EECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVT 462 (517)
T ss_pred CCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHH
Confidence 999999999999999999999999999999999999999999753211 111235679999999999999999999999
Q ss_pred HHHHHHHhhceeecCCCC---CCCCcCccceeeccCcCeEEEEEecC
Q 028420 160 LTLASLLHGFEFATPGDE---PLDMSEGVGLTNLKATPLQVLLTPRL 203 (209)
Q Consensus 160 ~~l~~ll~~fd~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~R~ 203 (209)
++++.|+++|++++.++. ++......+....+..++.+++++|.
T Consensus 463 ~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~ 509 (517)
T PLN02687 463 LLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRL 509 (517)
T ss_pred HHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCC
Confidence 999999999999987653 22222233445555678899999985
No 19
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=2.3e-47 Score=328.79 Aligned_cols=195 Identities=20% Similarity=0.373 Sum_probs=165.6
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhC-----CCCCCCccccCCCccHHHHHHHHccCCCCCCCCc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIG-----RERQVNESDTKKLVYLQAIVKETLRLYPATPLSV 76 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~-----~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~ 76 (209)
.++++||+|||+++++|++++|++||++|+|+++|++++.+ .+..++.+++.++||+++||+|++|++|+++..
T Consensus 285 ~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~- 363 (490)
T PLN02500 285 LSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL- 363 (490)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-
Confidence 46899999999999999999999999999999999998864 233578889999999999999999999999986
Q ss_pred ceeccccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccc----cCCCCcccccCCCCCCCccHH
Q 028420 77 PHESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDV----RGQNFELIPFGSGRRGCPGIS 152 (209)
Q Consensus 77 ~R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~----~~~~~~~~~Fg~G~~~C~G~~ 152 (209)
+|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||++++..... ...+..|+|||.|+|.|+|++
T Consensus 364 ~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~ 443 (490)
T PLN02500 364 HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSE 443 (490)
T ss_pred eeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHH
Confidence 7999999999999999999999999999999999999999999999965421110 113568999999999999999
Q ss_pred HHHHHHHHHHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEe
Q 028420 153 FALQVLLLTLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTP 201 (209)
Q Consensus 153 lA~~e~~~~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 201 (209)
||++|++++++.|+++|+++..++... .. .. .. .++.++.+++++
T Consensus 444 ~A~~el~~~la~ll~~f~~~~~~~~~~-~~-~~-~~-~~~~~l~~~~~~ 488 (490)
T PLN02500 444 LAKLEMAVFIHHLVLNFNWELAEADQA-FA-FP-FV-DFPKGLPIRVRR 488 (490)
T ss_pred HHHHHHHHHHHHHHhccEEEEcCCCcc-ee-cc-cc-cCCCCceEEEEe
Confidence 999999999999999999998765321 11 11 12 234588887765
No 20
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=4.2e-47 Score=327.58 Aligned_cols=201 Identities=26% Similarity=0.394 Sum_probs=172.7
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCC-CCCCccccCCCccHHHHHHHHccCCCCCCCCcceec
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRE-RQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHES 80 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~ 80 (209)
+++++||+|||+++++|++|+|++||++|+|+++|++++.+.+ ..++.+++.++||++|||+|++|++|+++.. .|.+
T Consensus 299 ~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~ 377 (502)
T PLN02426 299 VSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFD-SKFA 377 (502)
T ss_pred HHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCc-ceee
Confidence 4678999999999999999999999999999999999988753 3578899999999999999999999999987 5888
Q ss_pred ccccee-ccEEeCCCCEEEEcccccccCCCCC-CCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHH
Q 028420 81 IEDCTI-AGYHVPAGTRLFVNIPKIQRDPNVW-EKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVL 158 (209)
Q Consensus 81 ~~d~~i-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~ 158 (209)
.+|..+ +|+.||+||.|.++.+++||||++| +||++|+||||+++.. . ....+..++|||.|+|.|+|+++|++|+
T Consensus 378 ~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~-~-~~~~~~~~~pFg~G~R~CiG~~~A~~e~ 455 (502)
T PLN02426 378 AEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGV-F-VPENPFKYPVFQAGLRVCLGKEMALMEM 455 (502)
T ss_pred ccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCC-c-CCCCCcccCCCCCCCCCCccHHHHHHHH
Confidence 888777 8999999999999999999999999 9999999999997421 1 1123567899999999999999999999
Q ss_pred HHHHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEecCCC
Q 028420 159 LLTLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPRLHA 205 (209)
Q Consensus 159 ~~~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~~ 205 (209)
+++++.++++|+++..++.........+.+..+..++++++++|.++
T Consensus 456 ~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~~~ 502 (502)
T PLN02426 456 KSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERVRT 502 (502)
T ss_pred HHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEccCC
Confidence 99999999999999864322111223346666788999999999753
No 21
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=8.3e-47 Score=327.68 Aligned_cols=202 Identities=32% Similarity=0.628 Sum_probs=175.1
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceecc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESI 81 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~~ 81 (209)
+++++||+|||+++++|++++|++||++|+++++|++++++.+..++.+++.++||+++|++|++|++|+++...+|.+.
T Consensus 320 ~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~ 399 (534)
T PLN03018 320 VEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVAR 399 (534)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccC
Confidence 46789999999999999999999999999999999999988767788889999999999999999999999987679999
Q ss_pred ccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCcc---ccCCCCcccccCCCCCCCccHHHHHHHH
Q 028420 82 EDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDID---VRGQNFELIPFGSGRRGCPGISFALQVL 158 (209)
Q Consensus 82 ~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~---~~~~~~~~~~Fg~G~~~C~G~~lA~~e~ 158 (209)
+|++++|+.||||+.|.++.+++|+||++|+||++|+|+||++.++... .......|+|||.|+|.|+|++||++|+
T Consensus 400 ~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~ 479 (534)
T PLN03018 400 QDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMM 479 (534)
T ss_pred CCeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHH
Confidence 9999999999999999999999999999999999999999996542110 1123567999999999999999999999
Q ss_pred HHHHHHHHhhceeecCCCC-CCCCcCccceeeccCcCeEEEEEecCC
Q 028420 159 LLTLASLLHGFEFATPGDE-PLDMSEGVGLTNLKATPLQVLLTPRLH 204 (209)
Q Consensus 159 ~~~l~~ll~~fd~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~R~~ 204 (209)
+++++.|+++|++++.++. +++.....+... .+.++++.+++|..
T Consensus 480 ~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~p~~~~v~~~~R~~ 525 (534)
T PLN03018 480 VMMLARFLQGFNWKLHQDFGPLSLEEDDASLL-MAKPLLLSVEPRLA 525 (534)
T ss_pred HHHHHHHHHhceEEeCCCCCCCCcccccccee-cCCCeEEEEEeccc
Confidence 9999999999999976653 333333334444 45699999999953
No 22
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=6.3e-47 Score=324.18 Aligned_cols=198 Identities=35% Similarity=0.589 Sum_probs=174.4
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceecc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESI 81 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~~ 81 (209)
+++++||+|||+++++|++++|++||++|+++++|++++++.+. ++.+++.++||++++++|++|++|+++...+|.+.
T Consensus 268 ~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~ 346 (466)
T PLN02655 268 WEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVH 346 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccC
Confidence 56789999999999999999999999999999999999988644 88899999999999999999999999987679999
Q ss_pred ccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHHHHH
Q 028420 82 EDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLT 161 (209)
Q Consensus 82 ~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~ 161 (209)
+|++++|+.||||+.|.++.+++|+||++|+||++|+|+||++.... ......++|||.|+|.|+|++||..|++++
T Consensus 347 ~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~ 423 (466)
T PLN02655 347 EDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYE---SADMYKTMAFGAGKRVCAGSLQAMLIACMA 423 (466)
T ss_pred CCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcc---cCCcccccCCCCCCCCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999975421 113467899999999999999999999999
Q ss_pred HHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEecCC
Q 028420 162 LASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPRLH 204 (209)
Q Consensus 162 l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 204 (209)
++.|+++|++++.++.. ......+++..++.++.+++++|..
T Consensus 424 l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~ 465 (466)
T PLN02655 424 IARLVQEFEWRLREGDE-EKEDTVQLTTQKLHPLHAHLKPRGS 465 (466)
T ss_pred HHHHHHHeEEEeCCCCc-cccchhheeEeecCCcEEEEeecCC
Confidence 99999999999876532 1223445556577899999988864
No 23
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=6.7e-47 Score=327.71 Aligned_cols=197 Identities=28% Similarity=0.413 Sum_probs=166.3
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCC--------------------CCCCCccccCCCccHHHH
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGR--------------------ERQVNESDTKKLVYLQAI 61 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~--------------------~~~~~~~~~~~~~~l~~~ 61 (209)
+++++||+|||+++++|++++|++||++|+||++|++++.++ +..++.+++.++||++||
T Consensus 298 ~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Av 377 (516)
T PLN03195 298 LNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAV 377 (516)
T ss_pred HHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHH
Confidence 467899999999999999999999999999999999987642 234678889999999999
Q ss_pred HHHHccCCCCCCCCcceecccccee-ccEEeCCCCEEEEcccccccCCCCC-CCCCCCCCCccCCCCCCccccCCCCccc
Q 028420 62 VKETLRLYPATPLSVPHESIEDCTI-AGYHVPAGTRLFVNIPKIQRDPNVW-EKPNEFRPERFLTTHKDIDVRGQNFELI 139 (209)
Q Consensus 62 i~E~lRl~~~~~~~~~R~~~~d~~i-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~f~p~R~~~~~~~~~~~~~~~~~~ 139 (209)
|+|+||++|+++.. .|.+.+|..+ +|+.||||+.|.++.+++|+||++| +||++|+||||++.... ....+..|+
T Consensus 378 i~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~--~~~~~~~~~ 454 (516)
T PLN03195 378 ITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVF--QNASPFKFT 454 (516)
T ss_pred HHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCc--CCCCCceEe
Confidence 99999999999987 4666666555 8999999999999999999999999 99999999999964310 111346799
Q ss_pred ccCCCCCCCccHHHHHHHHHHHHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEecC
Q 028420 140 PFGSGRRGCPGISFALQVLLLTLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPRL 203 (209)
Q Consensus 140 ~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 203 (209)
|||.|+|+|+|++||++|++++++.++++|++++.++.+... ....+..+..+++|++++|.
T Consensus 455 pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~r~ 516 (516)
T PLN03195 455 AFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVKY--RMMTILSMANGLKVTVSRRS 516 (516)
T ss_pred ccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCccee--eeeeEEecCCCEEEEEEeCC
Confidence 999999999999999999999999999999999865543322 22334456788999999884
No 24
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=2.2e-46 Score=322.50 Aligned_cols=199 Identities=34% Similarity=0.587 Sum_probs=171.9
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceecc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESI 81 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~~ 81 (209)
+++++||+|||+++++|++++|++||++|+++++|++++++. ...+.+++.++||++|||+|++|++|+++...+|.+.
T Consensus 284 ~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~ 362 (489)
T PLN02936 284 LSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQV 362 (489)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceecc
Confidence 568899999999999999999999999999999999998875 3467888999999999999999999999888777778
Q ss_pred ccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHHHHH
Q 028420 82 EDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLT 161 (209)
Q Consensus 82 ~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~ 161 (209)
+|+.++|+.||+|+.|+++.+++|+||++|+||++|+|+||+.+.........+..|+|||.|+|.|+|++||++|++++
T Consensus 363 ~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~ 442 (489)
T PLN02936 363 EDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVA 442 (489)
T ss_pred CccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHH
Confidence 88888999999999999999999999999999999999999964321111223458999999999999999999999999
Q ss_pred HHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEecC
Q 028420 162 LASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPRL 203 (209)
Q Consensus 162 l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 203 (209)
++.|+++|+++..+++++.. ..++...++.+++|++++|-
T Consensus 443 la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~R~ 482 (489)
T PLN02936 443 LAVLLQRLDLELVPDQDIVM--TTGATIHTTNGLYMTVSRRR 482 (489)
T ss_pred HHHHHHhCeEEecCCCccce--ecceEEeeCCCeEEEEEeee
Confidence 99999999999876544332 22344556778999999884
No 25
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=2.7e-46 Score=320.10 Aligned_cols=190 Identities=23% Similarity=0.375 Sum_probs=164.6
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCC---CCCCCccccCCCccHHHHHHHHccCCCCCCCCcce
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGR---ERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPH 78 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R 78 (209)
.++++||+|||+++++|++++|++||++|+|+++|++++.+. +..++.+++.++||++++|+|++|++|+++.. .|
T Consensus 270 ~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R 348 (463)
T PLN02774 270 ITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV-LR 348 (463)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-cc
Confidence 467899999999999999999999999999999999998753 34578889999999999999999999999865 69
Q ss_pred eccccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHH
Q 028420 79 ESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVL 158 (209)
Q Consensus 79 ~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~ 158 (209)
.+.+|++++|+.||||+.|+++.+++|+||++|+||++|+||||++++.. ....|+|||+|+|.|+|++||++|+
T Consensus 349 ~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~ 423 (463)
T PLN02774 349 KTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE-----SHNYFFLFGGGTRLCPGKELGIVEI 423 (463)
T ss_pred ccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC-----CCccccCcCCCCCcCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999965411 1235899999999999999999999
Q ss_pred HHHHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEe
Q 028420 159 LLTLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTP 201 (209)
Q Consensus 159 ~~~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 201 (209)
+++++.|+++|++++.++.+... . ....+..++++++++
T Consensus 424 ~~~la~Ll~~f~~~~~~~~~~~~--~--~~~~p~~g~~~~~~~ 462 (463)
T PLN02774 424 STFLHYFVTRYRWEEVGGDKLMK--F--PRVEAPNGLHIRVSP 462 (463)
T ss_pred HHHHHHHHHhceEEECCCCcccc--C--CCCCCCCCceEEeee
Confidence 99999999999999976543211 1 122256778888764
No 26
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=4.1e-46 Score=318.09 Aligned_cols=191 Identities=22% Similarity=0.335 Sum_probs=168.1
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCC----CCCCCccccCCCccHHHHHHHHccCCCCCCCCcc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGR----ERQVNESDTKKLVYLQAIVKETLRLYPATPLSVP 77 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~----~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~ 77 (209)
+++++||+|||+++++|++++|++||++|+++++|+.++++. ....+.+++.++||++|||+|++|++|+++.. +
T Consensus 257 ~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~ 335 (452)
T PLN03141 257 IDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV-M 335 (452)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc-c
Confidence 467899999999999999999999999999999999887532 33467788899999999999999999998755 7
Q ss_pred eeccccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHH
Q 028420 78 HESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQV 157 (209)
Q Consensus 78 R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e 157 (209)
|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||++.+. .+..|+|||.|+|.|+|++||.+|
T Consensus 336 R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~------~~~~~~pFG~G~R~C~G~~lA~~e 409 (452)
T PLN03141 336 RKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM------NNSSFTPFGGGQRLCPGLDLARLE 409 (452)
T ss_pred eeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC------CCCCCCCCCCCCCCCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999997531 356799999999999999999999
Q ss_pred HHHHHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEecCC
Q 028420 158 LLLTLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPRLH 204 (209)
Q Consensus 158 ~~~~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 204 (209)
++++++.|+++|+++..++.... ..+..+..++.+.+++|.+
T Consensus 410 l~~~la~ll~~f~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 451 (452)
T PLN03141 410 ASIFLHHLVTRFRWVAEEDTIVN-----FPTVRMKRKLPIWVTRIDD 451 (452)
T ss_pred HHHHHHHHHhcCeeecCCCCeee-----cccccCCCCceEEEEeCCC
Confidence 99999999999999987653221 1344567799999999953
No 27
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=5.8e-45 Score=311.84 Aligned_cols=190 Identities=24% Similarity=0.454 Sum_probs=165.8
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCC---CCCCCccccCCCccHHHHHHHHccCCCCCCCCcce
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGR---ERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPH 78 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R 78 (209)
+++++||+|||+++++|++++|++||++|+++++|++++.+. +...+.+++.++||++|+++|++|++|+++.. .|
T Consensus 270 ~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R 348 (463)
T PLN02196 270 IGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FR 348 (463)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ce
Confidence 467899999999999999999999999999999999988764 34578888999999999999999999999887 59
Q ss_pred eccccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHH
Q 028420 79 ESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVL 158 (209)
Q Consensus 79 ~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~ 158 (209)
.+.+|+.++||.||||+.|.++.+++|+||++|+||++|+||||++.. .+..++|||.|+|.|+|+++|++|+
T Consensus 349 ~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-------~~~~~lpFG~G~r~C~G~~~A~~e~ 421 (463)
T PLN02196 349 EAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-------KPNTFMPFGNGTHSCPGNELAKLEI 421 (463)
T ss_pred eeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-------CCCcccCcCCCCCCCchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999632 3567999999999999999999999
Q ss_pred HHHHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEec
Q 028420 159 LLTLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPR 202 (209)
Q Consensus 159 ~~~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R 202 (209)
+++++.|+++|++++.+++ .... ...+..|..++.++++.+
T Consensus 422 ~~~la~ll~~f~~~~~~~~-~~~~--~~~~~~p~~~~~~~~~~~ 462 (463)
T PLN02196 422 SVLIHHLTTKYRWSIVGTS-NGIQ--YGPFALPQNGLPIALSRK 462 (463)
T ss_pred HHHHHHHHHhcEEEEcCCC-CceE--EcccccCCCCceEEEecC
Confidence 9999999999999987653 2222 122334667777777643
No 28
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=1.3e-44 Score=311.51 Aligned_cols=193 Identities=23% Similarity=0.400 Sum_probs=168.4
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCC----CCCCccccCCCccHHHHHHHHccCCCCCCCCcc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRE----RQVNESDTKKLVYLQAIVKETLRLYPATPLSVP 77 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~----~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~ 77 (209)
+++++||+|||+++++|++++|++||++|+|+++|++++.+.. ...+.+++.++||++++|+|++|++|+++.. .
T Consensus 293 ~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~ 371 (490)
T PLN02302 293 LMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-F 371 (490)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-h
Confidence 4678999999999999999999999999999999999987642 1267888999999999999999999999876 6
Q ss_pred eeccccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHH
Q 028420 78 HESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQV 157 (209)
Q Consensus 78 R~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e 157 (209)
|.+.+|++++|+.||+|+.|.++.+++|+||++|+||++|+|+||++.. ..+..++|||.|+|.|+|++||.+|
T Consensus 372 R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~------~~~~~~~pFG~G~r~C~G~~lA~~e 445 (490)
T PLN02302 372 REAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT------PKAGTFLPFGLGSRLCPGNDLAKLE 445 (490)
T ss_pred hcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC------CCCCCccCCCCCCcCCCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999643 1356789999999999999999999
Q ss_pred HHHHHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEecCC
Q 028420 158 LLLTLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPRLH 204 (209)
Q Consensus 158 ~~~~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 204 (209)
++++++.++++|++++.++. .+.. ......+..++.+++++|..
T Consensus 446 ~~~~la~ll~~f~~~~~~~~-~~~~--~~~~~~p~~~~~~~~~~~~~ 489 (490)
T PLN02302 446 ISIFLHHFLLGYRLERLNPG-CKVM--YLPHPRPKDNCLARITKVAS 489 (490)
T ss_pred HHHHHHHHHhcCeeEEcCCC-Ccce--eCCCCCCCCCceEEEEeccC
Confidence 99999999999999987542 2222 11224567788999998864
No 29
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=3.1e-44 Score=307.70 Aligned_cols=194 Identities=23% Similarity=0.348 Sum_probs=169.2
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCC---CCCCCccccCCCccHHHHHHHHccCCCCCCCCcce
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGR---ERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPH 78 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R 78 (209)
+++++||+|||+++++|++++|++||++++++++|++++.+. +...+.+++.++||++++++|++|++|+++.. +|
T Consensus 273 ~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R 351 (472)
T PLN02987 273 VALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FR 351 (472)
T ss_pred HHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cc
Confidence 467899999999999999999999999999999999988642 34467788899999999999999999999755 69
Q ss_pred eccccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHH
Q 028420 79 ESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVL 158 (209)
Q Consensus 79 ~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~ 158 (209)
.+.+|++++|+.||+|+.|.++.+.+|+||++|++|++|+|+||++.... ......++|||.|+|.|+|++||+.|+
T Consensus 352 ~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~---~~~~~~~l~FG~G~r~C~G~~lA~~e~ 428 (472)
T PLN02987 352 RAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT---TVPSNVFTPFGGGPRLCPGYELARVAL 428 (472)
T ss_pred cCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC---CCCCcceECCCCCCcCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999965421 113467999999999999999999999
Q ss_pred HHHHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEecC
Q 028420 159 LLTLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPRL 203 (209)
Q Consensus 159 ~~~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 203 (209)
+++++.|+++|++++.++.++.. +.+..+..++.+++++|.
T Consensus 429 ~~~la~ll~~f~~~~~~~~~~~~----~~~~~p~~~~~~~~~~r~ 469 (472)
T PLN02987 429 SVFLHRLVTRFSWVPAEQDKLVF----FPTTRTQKRYPINVKRRD 469 (472)
T ss_pred HHHHHHHHhceEEEECCCCceee----cccccCCCCceEEEEecc
Confidence 99999999999999876543222 235556778999999984
No 30
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.2e-44 Score=290.68 Aligned_cols=200 Identities=26% Similarity=0.493 Sum_probs=175.1
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCC-CCccccCCCccHHHHHHHHccCCCCCCCCcceec
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQ-VNESDTKKLVYLQAIVKETLRLYPATPLSVPHES 80 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~ 80 (209)
+.++|||..||+.+.+|++++|++||++++.+++|+.++++++.. .+.+.++++|+|++||+||+||+||.+.. .|.+
T Consensus 279 i~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~-~R~v 357 (486)
T KOG0684|consen 279 IGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSL-MRKV 357 (486)
T ss_pred HHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhH-HHhh
Confidence 456899999999999999999999999999999999999998665 89999999999999999999999988776 5999
Q ss_pred cccceecc----EEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCc--ccccCCCCCCCccHHHH
Q 028420 81 IEDCTIAG----YHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFE--LIPFGSGRRGCPGISFA 154 (209)
Q Consensus 81 ~~d~~i~g----~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~--~~~Fg~G~~~C~G~~lA 154 (209)
.+|.++.+ |.||+|..|.++++.+|+||++|++|+.|+|+||++++++.+....... +||||+|.|.|||+.||
T Consensus 358 ~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA 437 (486)
T KOG0684|consen 358 HEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFA 437 (486)
T ss_pred ccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHH
Confidence 99999976 9999999999999999999999999999999999987655432333444 49999999999999999
Q ss_pred HHHHHHHHHHHHhhceeecCCCCCCCCcCccceeeccCcCeEEEEEecC
Q 028420 155 LQVLLLTLASLLHGFEFATPGDEPLDMSEGVGLTNLKATPLQVLLTPRL 203 (209)
Q Consensus 155 ~~e~~~~l~~ll~~fd~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~ 203 (209)
.+|++.++..++++||+++.+++....+ ....+..|..++.++.+.|.
T Consensus 438 ~~eIk~~~~l~L~~fdleLid~~~P~~d-~s~~v~~P~g~v~irYK~R~ 485 (486)
T KOG0684|consen 438 YLEIKQFISLLLRHFDLELIDGPFPEVD-YSRMVMQPEGDVRIRYKRRP 485 (486)
T ss_pred HHHHHHHHHHHHHHcceeecCCCCCCCC-HHHhhcCCCCCceEEEeecC
Confidence 9999999999999999999987322332 22335567888999888875
No 31
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.1e-39 Score=273.39 Aligned_cols=146 Identities=41% Similarity=0.713 Sum_probs=137.5
Q ss_pred eeeecccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhhCCCCCCCccccCCCccHHHHHHHHccCCCCCCCCcceecc
Q 028420 2 QALILGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHIGRERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESI 81 (209)
Q Consensus 2 ~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~~ 81 (209)
+.+++||+|||+++++|+++.|++||+.++++++|.+. ||+.++++|++|++|+++. ..|.++
T Consensus 242 ~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~-~~R~~~ 304 (411)
T COG2124 242 ITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPL-ARRVAT 304 (411)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhc-cceecc
Confidence 46789999999999999999999999999999998764 6799999999999999998 689999
Q ss_pred ccceeccEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHHHHHHHHHHH
Q 028420 82 EDCTIAGYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGISFALQVLLLT 161 (209)
Q Consensus 82 ~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~ 161 (209)
+|++++|+.||+|+.|.++++++||||++|++|++|||+||. ..++|||+|+|.|+|.+||++|++++
T Consensus 305 ~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------------~~~l~FG~G~H~ClG~~lA~~E~~~~ 372 (411)
T COG2124 305 EDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------------NAHLPFGGGPHRCLGAALARLELKVA 372 (411)
T ss_pred CCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------------CCCcCCCCCCccccCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999996 35799999999999999999999999
Q ss_pred HHHHHhhceeecCCC
Q 028420 162 LASLLHGFEFATPGD 176 (209)
Q Consensus 162 l~~ll~~fd~~~~~~ 176 (209)
++.++++|+.....+
T Consensus 373 l~~ll~r~~~~~~~~ 387 (411)
T COG2124 373 LAELLRRFPLLLLAE 387 (411)
T ss_pred HHHHHHhCchhhcCC
Confidence 999999999877654
No 32
>PLN02648 allene oxide synthase
Probab=100.00 E-value=1.2e-37 Score=266.53 Aligned_cols=166 Identities=23% Similarity=0.447 Sum_probs=143.4
Q ss_pred cccchhHHHHHHHHHHHHHhCHH-HHHHHHHHHhHhhCC-CCCCCccccCCCccHHHHHHHHccCCCCCCCCcceecccc
Q 028420 6 LGGTDTTMVTLTWALTLILNHGD-VLKKAQDELDTHIGR-ERQVNESDTKKLVYLQAIVKETLRLYPATPLSVPHESIED 83 (209)
Q Consensus 6 ~ag~~tt~~~l~~~~~~l~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~R~~~~d 83 (209)
+++++|++++++|++++|++||+ ++++|++|++.+.+. +..++.+++.++||++++++|++|++|+++.. .|.+.+|
T Consensus 282 ~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~-~r~a~~d 360 (480)
T PLN02648 282 FNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ-YGRARED 360 (480)
T ss_pred HHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc-cceecCC
Confidence 44566677899999999999995 999999999998863 34678888999999999999999999999987 4788999
Q ss_pred ceec----cEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCccccCCCCccccc---------CCCCCCCcc
Q 028420 84 CTIA----GYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDIDVRGQNFELIPF---------GSGRRGCPG 150 (209)
Q Consensus 84 ~~i~----g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~~~~~~~~~~~F---------g~G~~~C~G 150 (209)
++++ ||.||||+.|.++.+.+|+||++|+||++|||+||+++... ....+++| |.|+|.|+|
T Consensus 361 ~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~-----~~~~~~~f~~g~~~~~~G~G~R~C~G 435 (480)
T PLN02648 361 FVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE-----KLLKYVFWSNGRETESPTVGNKQCAG 435 (480)
T ss_pred EEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc-----ccccccccCCCcccCCCCCCCccCcc
Confidence 9996 79999999999999999999999999999999999865321 11233443 677899999
Q ss_pred HHHHHHHHHHHHHHHHhhce-eecCCCC
Q 028420 151 ISFALQVLLLTLASLLHGFE-FATPGDE 177 (209)
Q Consensus 151 ~~lA~~e~~~~l~~ll~~fd-~~~~~~~ 177 (209)
++||++|++++++.|+++|+ +++.++.
T Consensus 436 ~~~A~~e~~~~la~Ll~~f~~~~l~~~~ 463 (480)
T PLN02648 436 KDFVVLVARLFVAELFLRYDSFEIEVDT 463 (480)
T ss_pred HHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence 99999999999999999998 9986653
No 33
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=56.02 E-value=10 Score=27.04 Aligned_cols=24 Identities=17% Similarity=0.271 Sum_probs=17.1
Q ss_pred CCCccHHHHHHHHHHHHHHHHhhc
Q 028420 146 RGCPGISFALQVLLLTLASLLHGF 169 (209)
Q Consensus 146 ~~C~G~~lA~~e~~~~l~~ll~~f 169 (209)
.+|.|+.||...+-.++.+++..-
T Consensus 18 yN~~gKKFsE~QiN~FIs~lItsP 41 (148)
T PF09201_consen 18 YNCLGKKFSETQINAFISHLITSP 41 (148)
T ss_dssp EETTS----HHHHHHHHHHHHHS-
T ss_pred ecccchHHHHHHHHHHHHHHhcCC
Confidence 479999999999999999999753
No 34
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=54.04 E-value=16 Score=21.94 Aligned_cols=24 Identities=17% Similarity=0.270 Sum_probs=18.5
Q ss_pred HHHHHHHhCHHHHHHHHHHHhHhh
Q 028420 18 WALTLILNHGDVLKKAQDELDTHI 41 (209)
Q Consensus 18 ~~~~~l~~~p~~~~~l~~Ei~~~~ 41 (209)
-++.+|.+||++.++|.+.=.+++
T Consensus 4 ~iV~YLv~nPevl~kl~~g~asLI 27 (57)
T PF05952_consen 4 EIVNYLVQNPEVLEKLKEGEASLI 27 (57)
T ss_pred HHHHHHHHChHHHHHHHcCCeeEe
Confidence 467899999999999987544443
No 35
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=53.28 E-value=11 Score=22.79 Aligned_cols=8 Identities=50% Similarity=0.974 Sum_probs=6.3
Q ss_pred CCCccCCC
Q 028420 118 RPERFLTT 125 (209)
Q Consensus 118 ~p~R~~~~ 125 (209)
||||||..
T Consensus 44 DPERWLP~ 51 (59)
T PF08492_consen 44 DPERWLPK 51 (59)
T ss_pred CccccCch
Confidence 78899864
No 36
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and metabolism]
Probab=49.84 E-value=39 Score=27.98 Aligned_cols=70 Identities=16% Similarity=0.267 Sum_probs=42.6
Q ss_pred HHHHHHHHccCCCCC---CCCcceeccccceec----cEEeCCCCEEEEcccccccCCCCCCCCCCCCCCccCCCCCCcc
Q 028420 58 LQAIVKETLRLYPAT---PLSVPHESIEDCTIA----GYHVPAGTRLFVNIPKIQRDPNVWEKPNEFRPERFLTTHKDID 130 (209)
Q Consensus 58 l~~~i~E~lRl~~~~---~~~~~R~~~~d~~i~----g~~ip~g~~v~~~~~~~~~d~~~~~~p~~f~p~R~~~~~~~~~ 130 (209)
-+.+++.+..+.||. |+.+.-.++.|..+- .-.|..||.|.++ .
T Consensus 275 ger~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~-G---------------------------- 325 (361)
T COG1759 275 GERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG-G---------------------------- 325 (361)
T ss_pred HHHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC-C----------------------------
Confidence 356777888888865 444555666665552 3456677766554 1
Q ss_pred ccCCCCcccccCCCCCCCccHHHHHHHHHHHH
Q 028420 131 VRGQNFELIPFGSGRRGCPGISFALQVLLLTL 162 (209)
Q Consensus 131 ~~~~~~~~~~Fg~G~~~C~G~~lA~~e~~~~l 162 (209)
.+.+++-||- -+-.|+++|. |++.++
T Consensus 326 ---spYs~l~~~~--pms~GrRIA~-EIk~A~ 351 (361)
T COG1759 326 ---SPYSNLYWGE--PMSTGRRIAR-EIKEAI 351 (361)
T ss_pred ---CcchhhhcCC--CcchhhHHHH-HHHHHH
Confidence 1222233433 3679999998 787765
No 37
>PRK06789 flagellar motor switch protein; Validated
Probab=47.67 E-value=22 Score=22.52 Aligned_cols=40 Identities=13% Similarity=0.178 Sum_probs=31.3
Q ss_pred HHHHHccCCCCCCCCcceecccc--ceeccEEeCCCCEEEEc
Q 028420 61 IVKETLRLYPATPLSVPHESIED--CTIAGYHVPAGTRLFVN 100 (209)
Q Consensus 61 ~i~E~lRl~~~~~~~~~R~~~~d--~~i~g~~ip~g~~v~~~ 100 (209)
-++|.+.|.+..-..+.+.+.+. +.++|..|.+|..|.++
T Consensus 21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~ 62 (74)
T PRK06789 21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN 62 (74)
T ss_pred EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence 46888999987766666766664 55689999999999876
No 38
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=43.37 E-value=21 Score=27.37 Aligned_cols=44 Identities=25% Similarity=0.372 Sum_probs=32.4
Q ss_pred CCccHHHHHHHHccCCCCCCCCcceeccccceeccEEeCCCCEEEE
Q 028420 54 KLVYLQAIVKETLRLYPATPLSVPHESIEDCTIAGYHVPAGTRLFV 99 (209)
Q Consensus 54 ~~~~l~~~i~E~lRl~~~~~~~~~R~~~~d~~i~g~~ip~g~~v~~ 99 (209)
.-....|||.|..-+...... .=...+|+.++|..||+|+.+..
T Consensus 51 ~~n~I~A~V~~~qtv~~Gs~v--rlRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 51 EKNTIRAVVDGTQTVVDGSRV--RLRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CCCeEEEEEecceEEeCCCEE--EEEEcCceEECCEEeCCCCEEEE
Confidence 344578899999877654322 12457899999999999998765
No 39
>PF14129 DUF4296: Domain of unknown function (DUF4296)
Probab=32.80 E-value=1.1e+02 Score=19.77 Aligned_cols=36 Identities=6% Similarity=0.055 Sum_probs=28.5
Q ss_pred cccchhHHHHHHHHHHHHHhCHHHHHHHHHHHhHhh
Q 028420 6 LGGTDTTMVTLTWALTLILNHGDVLKKAQDELDTHI 41 (209)
Q Consensus 6 ~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~ 41 (209)
+--+..++..+...+.+.++||+..+++.+.+..-+
T Consensus 43 ~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL 78 (87)
T PF14129_consen 43 FKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL 78 (87)
T ss_pred HHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 334566777888889999999999999999887543
No 40
>PF14550 Peptidase_U35_2: Putative phage protease XkdF
Probab=32.29 E-value=33 Score=24.03 Aligned_cols=30 Identities=30% Similarity=0.461 Sum_probs=21.2
Q ss_pred eccccceeccEEeCCCCEEEEcccccccCCCCC
Q 028420 79 ESIEDCTIAGYHVPAGTRLFVNIPKIQRDPNVW 111 (209)
Q Consensus 79 ~~~~d~~i~g~~ip~g~~v~~~~~~~~~d~~~~ 111 (209)
.++.|.+++|..||+|+.|..--. .|+++|
T Consensus 72 I~~~d~~~~g~~i~~GtWv~~~k~---~ddelW 101 (122)
T PF14550_consen 72 IAPEDMEIGGETIPKGTWVVGVKI---TDDELW 101 (122)
T ss_pred ecCCCcccCCeeecceEEEEEEEe---cCHHHH
Confidence 445688999999999999865422 344555
No 41
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=29.83 E-value=25 Score=20.81 Aligned_cols=11 Identities=45% Similarity=0.996 Sum_probs=9.0
Q ss_pred cccCCCCCCCc
Q 028420 139 IPFGSGRRGCP 149 (209)
Q Consensus 139 ~~Fg~G~~~C~ 149 (209)
-+||-|.|.|-
T Consensus 12 ~kfg~GsrsC~ 22 (56)
T KOG3506|consen 12 RKFGQGSRSCR 22 (56)
T ss_pred cccCCCCccee
Confidence 36999999885
No 42
>PRK05933 type III secretion system protein; Validated
Probab=26.67 E-value=62 Score=26.85 Aligned_cols=43 Identities=23% Similarity=0.210 Sum_probs=33.4
Q ss_pred HHHHHHHHccCCCCCCCCcceec---cccceeccEEeCCCCEEEEc
Q 028420 58 LQAIVKETLRLYPATPLSVPHES---IEDCTIAGYHVPAGTRLFVN 100 (209)
Q Consensus 58 l~~~i~E~lRl~~~~~~~~~R~~---~~d~~i~g~~ip~g~~v~~~ 100 (209)
.+--|+|.++|.+..-.-+.|.+ .-|+.++|..|.+|..|.++
T Consensus 317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd 362 (372)
T PRK05933 317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG 362 (372)
T ss_pred ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence 45678999999987765554543 34677799999999999886
No 43
>PF11227 DUF3025: Protein of unknown function (DUF3025); InterPro: IPR021390 Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function.
Probab=25.06 E-value=46 Score=25.73 Aligned_cols=23 Identities=26% Similarity=0.429 Sum_probs=18.2
Q ss_pred Ecccc-cccCCCCCCCCCCCCCCc
Q 028420 99 VNIPK-IQRDPNVWEKPNEFRPER 121 (209)
Q Consensus 99 ~~~~~-~~~d~~~~~~p~~f~p~R 121 (209)
++-|. -+.|+.+|.|.+.|+|.|
T Consensus 188 iPGW~~~n~~~~FY~d~~~FRp~R 211 (212)
T PF11227_consen 188 IPGWWPDNEDPAFYDDTDVFRPGR 211 (212)
T ss_pred CCCCCCCCCCcccccCccccCCCC
Confidence 34343 388999999999999987
No 44
>PF11138 DUF2911: Protein of unknown function (DUF2911); InterPro: IPR021314 This bacterial family of proteins has no known function.
Probab=24.78 E-value=65 Score=23.36 Aligned_cols=24 Identities=38% Similarity=0.505 Sum_probs=19.4
Q ss_pred eccccceeccEEeCCCCEEEEccc
Q 028420 79 ESIEDCTIAGYHVPAGTRLFVNIP 102 (209)
Q Consensus 79 ~~~~d~~i~g~~ip~g~~v~~~~~ 102 (209)
...+|+.++|..||+|+.-+....
T Consensus 51 ~f~~dv~igGk~l~AG~Ysl~tiP 74 (145)
T PF11138_consen 51 TFSKDVTIGGKKLKAGTYSLFTIP 74 (145)
T ss_pred EECCCeEECCEEcCCeeEEEEEec
Confidence 456899999999999998766543
No 45
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=24.61 E-value=50 Score=21.65 Aligned_cols=33 Identities=27% Similarity=0.302 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHHHh-------CHHHHHHHHHHHhHhhCC
Q 028420 11 TTMVTLTWALTLILN-------HGDVLKKAQDELDTHIGR 43 (209)
Q Consensus 11 tt~~~l~~~~~~l~~-------~p~~~~~l~~Ei~~~~~~ 43 (209)
+|+...---+..++. .|++.+.+|+||-+++..
T Consensus 13 ~Sa~~AkeRLQiilA~eR~~~~~pd~l~~Lr~eIl~VI~K 52 (88)
T COG0851 13 NSAETAKERLQLILAHERAAGLQPDYLEQLRKEILEVISK 52 (88)
T ss_pred CcHHHHHHHHHHhhhhhhhcCCCcchHHHHHHHHHHHHHH
Confidence 555554444433332 378889999999887654
No 46
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=24.60 E-value=25 Score=26.27 Aligned_cols=36 Identities=25% Similarity=0.457 Sum_probs=24.0
Q ss_pred CCCCCCccCCCCCCccccCCCCcccccCCCCCCCccHH
Q 028420 115 NEFRPERFLTTHKDIDVRGQNFELIPFGSGRRGCPGIS 152 (209)
Q Consensus 115 ~~f~p~R~~~~~~~~~~~~~~~~~~~Fg~G~~~C~G~~ 152 (209)
.++||++|-.-- -....+..+.+-|..|+-.|.|..
T Consensus 35 aeYnP~qFpGlv--~Rl~ePk~a~LIF~SGK~VcTGaK 70 (185)
T COG2101 35 AEYNPEQFPGLV--YRLEEPKTAALIFRSGKVVCTGAK 70 (185)
T ss_pred CccCHhHCCeeE--EEecCCcceEEEEecCcEEEeccC
Confidence 467888875210 011224567799999999999975
No 47
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=24.52 E-value=1e+02 Score=17.00 Aligned_cols=19 Identities=21% Similarity=0.127 Sum_probs=15.3
Q ss_pred HHHHHHHHHhCHHHHHHHH
Q 028420 16 LTWALTLILNHGDVLKKAQ 34 (209)
Q Consensus 16 l~~~~~~l~~~p~~~~~l~ 34 (209)
-.|.+.-++++||+|.-|.
T Consensus 12 gl~gl~~~l~DpdvqrgL~ 30 (42)
T PF07849_consen 12 GLFGLLRALRDPDVQRGLG 30 (42)
T ss_pred CHHHHHHHHcCHHHHHHHH
Confidence 3477888999999988765
No 48
>PF14483 Cut8_M: Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=24.48 E-value=1.3e+02 Score=16.34 Aligned_cols=21 Identities=14% Similarity=0.248 Sum_probs=14.6
Q ss_pred HHHHHHHHHH-hCHHHHHHHHH
Q 028420 15 TLTWALTLIL-NHGDVLKKAQD 35 (209)
Q Consensus 15 ~l~~~~~~l~-~~p~~~~~l~~ 35 (209)
.+-..+..++ +||++++.++.
T Consensus 14 qL~~lL~~l~~~HPei~~~i~~ 35 (38)
T PF14483_consen 14 QLQSLLQSLCERHPEIQQEIRS 35 (38)
T ss_dssp HHHHHHHHHHHHSTHHHHHHHT
T ss_pred HHHHHHHHHHHhChhHHHHHHh
Confidence 4555666666 79999887764
No 49
>PHA03162 hypothetical protein; Provisional
Probab=22.26 E-value=55 Score=23.19 Aligned_cols=24 Identities=25% Similarity=0.494 Sum_probs=18.6
Q ss_pred CCCCCCCccHHHHHHHHHHHHHHH
Q 028420 142 GSGRRGCPGISFALQVLLLTLASL 165 (209)
Q Consensus 142 g~G~~~C~G~~lA~~e~~~~l~~l 165 (209)
++|.+.||+++..+-++-.=|+.|
T Consensus 2 ~~~~k~~pk~~~tmEeLaaeL~kL 25 (135)
T PHA03162 2 AGGSKKCPKAQPTMEDLAAEIAKL 25 (135)
T ss_pred CCCcCCCCccCCCHHHHHHHHHHH
Confidence 468999999998887776666654
No 50
>PF12444 Sox_N: Sox developmental protein N terminal ; InterPro: IPR022151 This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes.
Probab=20.96 E-value=65 Score=21.00 Aligned_cols=20 Identities=10% Similarity=0.320 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHhhceeecCC
Q 028420 156 QVLLLTLASLLHGFEFATPG 175 (209)
Q Consensus 156 ~e~~~~l~~ll~~fd~~~~~ 175 (209)
..|+-++.++|+-|||.+.+
T Consensus 60 ~~IrdAVsqVLkGYDWtLVP 79 (84)
T PF12444_consen 60 VCIRDAVSQVLKGYDWTLVP 79 (84)
T ss_pred HHHHHHHHHHhccCCceeee
Confidence 46888999999999998864
No 51
>PF15300 INT_SG_DDX_CT_C: INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=20.95 E-value=47 Score=20.48 Aligned_cols=14 Identities=29% Similarity=0.579 Sum_probs=11.9
Q ss_pred ccHHHHHHHHccCC
Q 028420 56 VYLQAIVKETLRLY 69 (209)
Q Consensus 56 ~~l~~~i~E~lRl~ 69 (209)
.+++.+|+|++|+.
T Consensus 41 ~fv~~~IkEA~RFk 54 (65)
T PF15300_consen 41 QFVEMIIKEAARFK 54 (65)
T ss_pred HHHHHHHHHHHHHH
Confidence 47899999999974
No 52
>PF13993 YccJ: YccJ-like protein
Probab=20.79 E-value=88 Score=19.00 Aligned_cols=32 Identities=22% Similarity=0.239 Sum_probs=22.9
Q ss_pred cccchhHHHHHHHHHHHHHhCHHHH-HHHHHHH
Q 028420 6 LGGTDTTMVTLTWALTLILNHGDVL-KKAQDEL 37 (209)
Q Consensus 6 ~ag~~tt~~~l~~~~~~l~~~p~~~-~~l~~Ei 37 (209)
+|..-.||.-++-++++|+++.+.+ +++-+|-
T Consensus 8 WA~~ReTS~EIAeAIFElA~~dE~lAekIWeeG 40 (69)
T PF13993_consen 8 WANVRETSIEIAEAIFELANNDEVLAEKIWEEG 40 (69)
T ss_pred HHHHhcCCHHHHHHHHHHhcccHHHHHHHHHcc
Confidence 3445567778899999999987754 6666653
No 53
>PF10264 Stork_head: Winged helix Storkhead-box1 domain; InterPro: IPR019391 In humans the Storkhead-box protein controls polyploidization of extravillus trophoblast and is implicated in pre-eclampsia []. This entry represents the conserved N-terminal winged-helix domain, which is likely to bind DNA.
Probab=20.57 E-value=1.6e+02 Score=18.99 Aligned_cols=39 Identities=10% Similarity=0.131 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHh--CHHHHHHHHHHHhHhhCCCCCCCccc
Q 028420 13 MVTLTWALTLILN--HGDVLKKAQDELDTHIGRERQVNESD 51 (209)
Q Consensus 13 ~~~l~~~~~~l~~--~p~~~~~l~~Ei~~~~~~~~~~~~~~ 51 (209)
+-++.|++..|-. .+.-++.|++.+.+....-..++.+.
T Consensus 13 ~EvlC~~I~dln~~~~~at~E~l~~~L~~~yp~i~~Ps~e~ 53 (80)
T PF10264_consen 13 PEVLCWVISDLNAAGQPATQETLREHLRKHYPGIAIPSQEV 53 (80)
T ss_pred HHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCCCCHHH
Confidence 4568888888876 44568889988887766544444443
No 54
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=20.54 E-value=1.5e+02 Score=19.64 Aligned_cols=26 Identities=19% Similarity=0.289 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHhHh
Q 028420 15 TLTWALTLILNHGDVLKKAQDELDTH 40 (209)
Q Consensus 15 ~l~~~~~~l~~~p~~~~~l~~Ei~~~ 40 (209)
++.|.+.-.-..|+..+.|.+||++.
T Consensus 55 ~lgy~v~tFnDcpeA~~eL~~eI~eA 80 (91)
T PF08285_consen 55 TLGYGVATFNDCPEAAKELQKEIKEA 80 (91)
T ss_pred HHHHhhhccCCCHHHHHHHHHHHHHH
Confidence 45566666667899999999999874
No 55
>PF14824 Sirohm_synth_M: Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=20.06 E-value=1.4e+02 Score=15.38 Aligned_cols=15 Identities=7% Similarity=0.164 Sum_probs=10.8
Q ss_pred CHHHHHHHHHHHhHh
Q 028420 26 HGDVLKKAQDELDTH 40 (209)
Q Consensus 26 ~p~~~~~l~~Ei~~~ 40 (209)
.|.+..++|+|+.+.
T Consensus 15 sP~la~~iR~~ie~~ 29 (30)
T PF14824_consen 15 SPRLARLIRKEIERL 29 (30)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHh
Confidence 577788888888753
No 56
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=20.03 E-value=80 Score=27.10 Aligned_cols=20 Identities=25% Similarity=0.436 Sum_probs=15.9
Q ss_pred cccceeccEEeCCCCEEEEc
Q 028420 81 IEDCTIAGYHVPAGTRLFVN 100 (209)
Q Consensus 81 ~~d~~i~g~~ip~g~~v~~~ 100 (209)
.+|+.++|..||+||.|+..
T Consensus 279 le~~~v~~~~ipkgt~l~g~ 298 (410)
T TIGR03779 279 LEPIQAGDLVIPKGTVLYGT 298 (410)
T ss_pred cCceeeCCEEecCCCEEEEE
Confidence 46777789999999987654
Done!