BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028423
MGAEHLIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHIL
SEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSG
VDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKVLHLALYL
KKLLFNLARDSLSSFSFYSIIITFFSFSP

High Scoring Gene Products

Symbol, full name Information P value
AT1G19600 protein from Arabidopsis thaliana 8.4e-58
DET_0711
carbohydrate kinase, PfkB family 		protein from Dehalococcoides ethenogenes 195 7.4e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028423
        (209 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2013094 - symbol:AT1G19600 species:3702 "Arabi...   594  8.4e-58   1
TIGR_CMR|DET_0711 - symbol:DET_0711 "carbohydrate kinase,...   138  7.4e-09   1


>TAIR|locus:2013094 [details] [associations]
            symbol:AT1G19600 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0016301 "kinase activity"
            evidence=ISS] Pfam:PF00294 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0016301 eggNOG:COG0524 InterPro:IPR011611 EMBL:AC024609
            EMBL:AC025808 HSSP:Q9TVW2 EMBL:BT004821 EMBL:AK227761
            IPI:IPI00525669 PIR:F86328 RefSeq:NP_173390.1 UniGene:At.26831
            ProteinModelPortal:Q9LN35 SMR:Q9LN35 PRIDE:Q9LN35
            EnsemblPlants:AT1G19600.1 GeneID:838547 KEGG:ath:AT1G19600
            TAIR:At1g19600 HOGENOM:HOG000235949 InParanoid:Q9LN35 OMA:LEECCKV
            PhylomeDB:Q9LN35 ProtClustDB:PLN02379 Genevestigator:Q9LN35
            Uniprot:Q9LN35
        Length = 355

 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 117/158 (74%), Positives = 133/158 (84%)

Query:    14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSP 73
             +A L+LGLQPAALID+VA VDWSLLDQIPG+RGGSI V  +ELEH+L E+  HI    +P
Sbjct:    11 EAPLVLGLQPAALIDNVAPVDWSLLDQIPGDRGGSIAVQKDELEHMLKELDAHI--SVAP 68

Query:    74 IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPT 133
             +K +AGGSVTNT+RGLSVGFGV  G+IGAYGDD+QGQLFVSNM FSGV +SRLR K+G T
Sbjct:    69 LKKMAGGSVTNTVRGLSVGFGVATGIIGAYGDDEQGQLFVSNMGFSGVSISRLRKKKGST 128

Query:   134 GQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGS 171
              QCVCLVD SGNRTMRPCLS+AVKIQADEL  ED  GS
Sbjct:   129 AQCVCLVDDSGNRTMRPCLSSAVKIQADELSKEDFTGS 166


>TIGR_CMR|DET_0711 [details] [associations]
            symbol:DET_0711 "carbohydrate kinase, PfkB family"
            species:243164 "Dehalococcoides ethenogenes 195" [GO:0005975
            "carbohydrate metabolic process" evidence=ISS] [GO:0019200
            "carbohydrate kinase activity" evidence=ISS] Pfam:PF00294
            GO:GO:0016301 EMBL:CP000027 GenomeReviews:CP000027_GR
            eggNOG:COG0524 InterPro:IPR011611 HOGENOM:HOG000235950 KO:K00852
            RefSeq:YP_181452.1 ProteinModelPortal:Q3Z8J7 STRING:Q3Z8J7
            GeneID:3229948 KEGG:det:DET0711 PATRIC:21608485
            ProtClustDB:CLSK837320 BioCyc:DETH243164:GJNF-712-MONOMER
            Uniprot:Q3Z8J7
        Length = 328

 Score = 138 (53.6 bits), Expect = 7.4e-09, P = 7.4e-09
 Identities = 38/103 (36%), Positives = 56/103 (54%)

Query:    47 GSIPVA-IEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGD 105
             G++ V  I  +E IL + +  + +  S      GGS  NTI GLS   G+ CG IGA G+
Sbjct:    12 GAVHVDHIYTVEQILHDGECVVTESAS----FPGGSGANTIHGLS-RLGLKCGFIGAVGN 66

Query:   106 DQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRT 147
             D  G L +S+ + +G+D   L +K    TG  V L ++SG R+
Sbjct:    67 DPDGNLLISDFENAGIDNRYLLVKNEAQTGSVVSLSESSGRRS 109


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.137   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      209       175   0.00078  109 3  11 22  0.42    32
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  572 (61 KB)
  Total size of DFA:  137 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.35u 0.09s 16.44t   Elapsed:  00:00:01
  Total cpu time:  16.35u 0.09s 16.44t   Elapsed:  00:00:01
  Start:  Mon May 20 17:22:38 2013   End:  Mon May 20 17:22:39 2013

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