BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028423
(209 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0AEW6|INGK_ECOLI Inosine-guanosine kinase OS=Escherichia coli (strain K12) GN=gsk
PE=1 SV=1
Length = 434
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPS 72
+ AA ++G+ L+D A+VD +++ G S+ + + E + E+K L
Sbjct: 31 TSAAWVVGID-QTLVDIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNL---- 85
Query: 73 PIKTIAGGSVTNTIRGLSVG-------FGVPCG--LIGAYGDDQQGQLFVSNMQFSGVDV 123
AGG++ NT+ SV GV C IG+Y ++ N S D+
Sbjct: 86 ITHQFAGGTIGNTMHNYSVLADDRSVLLGVMCSNIEIGSYA-----YRYLCNTS-SRTDL 139
Query: 124 SRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKVLHLALYL 180
+ L+ GP G+C L+ SG RT + +++A+ + + + G+ L L YL
Sbjct: 140 NYLQGVDGPIGRCFTLIGESGERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYL 196
>sp|P0AEW7|INGK_ECOL6 Inosine-guanosine kinase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=gsk PE=3 SV=1
Length = 434
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPS 72
+ AA ++G+ L+D A+VD +++ G S+ + + E + E+K L
Sbjct: 31 TSAAWVVGID-QTLVDIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNL---- 85
Query: 73 PIKTIAGGSVTNTIRGLSVG-------FGVPCG--LIGAYGDDQQGQLFVSNMQFSGVDV 123
AGG++ NT+ SV GV C IG+Y ++ N S D+
Sbjct: 86 ITHQFAGGTIGNTMHNYSVLADDRSVLLGVMCSNIEIGSYA-----YRYLCNTS-SRTDL 139
Query: 124 SRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKVLHLALYL 180
+ L+ GP G+C L+ SG RT + +++A+ + + + G+ L L YL
Sbjct: 140 NYLQGVDGPIGRCFTLIGESGERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYL 196
>sp|P0AEW8|INGK_ECO57 Inosine-guanosine kinase OS=Escherichia coli O157:H7 GN=gsk PE=3
SV=1
Length = 434
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPS 72
+ AA ++G+ L+D A+VD +++ G S+ + + E + E+K L
Sbjct: 31 TSAAWVVGID-QTLVDIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNL---- 85
Query: 73 PIKTIAGGSVTNTIRGLSVG-------FGVPCG--LIGAYGDDQQGQLFVSNMQFSGVDV 123
AGG++ NT+ SV GV C IG+Y ++ N S D+
Sbjct: 86 ITHQFAGGTIGNTMHNYSVLADDRSVLLGVMCSNIEIGSYA-----YRYLCNTS-SRTDL 139
Query: 124 SRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKVLHLALYL 180
+ L+ GP G+C L+ SG RT + +++A+ + + + G+ L L YL
Sbjct: 140 NYLQGVDGPIGRCFTLIGESGERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYL 196
>sp|A7ZAH9|IOLC_BACA2 5-dehydro-2-deoxygluconokinase OS=Bacillus amyloliquefaciens
(strain FZB42) GN=iolC PE=3 SV=1
Length = 330
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 68 LDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR 127
++E GGS N G S G+ G IG DDQ G+ VS MQ GVD S++
Sbjct: 32 MEETMTFSKYVGGSPANIAIG-SAKLGLKAGFIGKIPDDQHGRFIVSYMQGKGVDTSQMT 90
Query: 128 MKR 130
+ R
Sbjct: 91 VDR 93
>sp|Q9LZG0|ADK2_ARATH Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2 PE=1 SV=1
Length = 345
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 74 IKTIAGGSVTNTIRGLSVGFGVP--CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG 131
++ IAGG+ N+I+ +P +G+ G D+ G+ + +GV+V +
Sbjct: 60 VEYIAGGATQNSIKVAQWMLQIPGATSYMGSIGKDKYGEAMKKDATAAGVNVHYYEDESA 119
Query: 132 PTGQC-VCLVDASGNRTMRPCLSNAVKIQADEL 163
PTG C VC+V G R++ LS A + D L
Sbjct: 120 PTGTCGVCVV--GGERSLIANLSAANCYKVDHL 150
>sp|O29891|Y356_ARCFU Uncharacterized sugar kinase AF_0356 OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=AF_0356 PE=3 SV=1
Length = 250
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 14/122 (11%)
Query: 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTM--RP 150
G+ IG G D++G++ +++ + GV + G +G + VD GNR + P
Sbjct: 6 LGIETAYIGKVGSDEEGRILLADFEREGVSTDFVIRAEGRSGTAMIFVDEKGNRAILVDP 65
Query: 151 CLSNAVKIQADELIAEDVKGSKVLHLALYLKKLLFNLARDSLSSFSFYSIIITFF---SF 207
+++ I DE+ + + ++HL + + ++ L S + I+ F SF
Sbjct: 66 GVNDT--IAYDEIDVDSARKYDLIHLTSF-------ICKNGLDSLNSQKRIVEEFDSVSF 116
Query: 208 SP 209
P
Sbjct: 117 DP 118
>sp|Q9KAG8|IOLC_BACHD 5-dehydro-2-deoxygluconokinase OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=iolC PE=1 SV=1
Length = 331
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 13/80 (16%)
Query: 68 LDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR 127
++E GGS N + G S G+ G IG DDQ G+ S M+ GVD S L
Sbjct: 32 MEETMTFSKYVGGSPANIVIG-SSKLGLKAGFIGKIADDQHGRFIESYMRGVGVDTSNL- 89
Query: 128 MKRGPTGQCVCLVDASGNRT 147
+VD G++T
Sbjct: 90 -----------VVDQEGHKT 98
>sp|Q5WKY9|IOLC_BACSK 5-dehydro-2-deoxygluconokinase OS=Bacillus clausii (strain KSM-K16)
GN=iolC PE=3 SV=1
Length = 326
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 68 LDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR 127
++E GGS N G S G+ G +G DDQ G+ S M+ +GVD S+L
Sbjct: 32 MEETRSFTKYVGGSPANIAIG-SAKLGLKVGFVGKIPDDQHGRFISSYMREAGVDTSQLV 90
Query: 128 MKR 130
+ R
Sbjct: 91 IDR 93
>sp|Q55480|YZ37_SYNY3 Uncharacterized sugar kinase slr0537 OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=slr0537 PE=3 SV=1
Length = 333
Score = 38.5 bits (88), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 75 KTIAGGSVTNTIRGLSVGFGVPCGLIGAY----GDDQQGQLFVSNMQFSGVDVS--RLRM 128
K +GGS NT+ L+ G G Y G D+ G ++ ++ G+D +
Sbjct: 57 KQSSGGSAANTLVSLA-----QLGGTGFYACKVGKDEAGAFYLQDLNDCGLDTNPHHETA 111
Query: 129 KRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKVLHLALYL 180
G TG+C+ V +RTM L + + E+ +K S+ L+L YL
Sbjct: 112 GEGITGKCLVFVTPDADRTMNAFLGISGSLSVTEMDWSALKQSQYLYLEGYL 163
>sp|Q9TVW2|ADK_TOXGO Adenosine kinase OS=Toxoplasma gondii GN=AK PE=1 SV=1
Length = 363
Score = 38.1 bits (87), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 26 LIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNT 85
++D VA V S LD+ +RG + +A E I S LD+ +P ++ GGS N+
Sbjct: 22 ILDLVAEVPSSFLDEFFLKRGDAT-LATPEQMRIYS-----TLDQFNPT-SLPGGSALNS 74
Query: 86 IRGLSVGFGVP--CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVD 141
+R + P G +GA GDD +GQ+ G+ + TG C L++
Sbjct: 75 VRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLIN 132
>sp|Q9SF85|ADK1_ARATH Adenosine kinase 1 OS=Arabidopsis thaliana GN=ADK1 PE=1 SV=1
Length = 344
Score = 37.7 bits (86), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 19/142 (13%)
Query: 26 LIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSP---IKTIAGGSV 82
L+D A VD LD+ + +I + E +H+ + DE S ++ IAGG+
Sbjct: 17 LLDVSAVVDQQFLDKYDIKLNNAI---LAEDKHL------PMYDEMSQKFNVEYIAGGAT 67
Query: 83 TNTIRGLSVGFGVP--CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQC-VCL 139
N+I+ VP +G+ G D+ G+ + +GV V + PTG C VC+
Sbjct: 68 QNSIKVAQWMLQVPGATSYMGSIGKDKYGEAMKKDATAAGVYVHYYEDEATPTGTCGVCV 127
Query: 140 VDASGNRTMRPCLS--NAVKIQ 159
+ G R++ LS N K++
Sbjct: 128 L--GGERSLIANLSAANCYKVE 147
>sp|P42414|IOLC_BACSU 5-dehydro-2-deoxygluconokinase OS=Bacillus subtilis (strain 168)
GN=iolC PE=1 SV=1
Length = 325
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 68 LDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRL 126
++E GGS N G S G+ G IG DDQ G+ S M+ +GVD +++
Sbjct: 32 MEETMTFSKYVGGSPANIAIG-SAKLGLKAGFIGKIPDDQHGRFIESYMRKTGVDTTQM 89
>sp|O49923|ADK_PHYPA Adenosine kinase OS=Physcomitrella patens subsp. patens GN=ADK PE=2
SV=1
Length = 343
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 74 IKTIAGGSVTNTIR--GLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG 131
++ IAGG+ NTIR +G G G D+ G GV++ +
Sbjct: 56 VEYIAGGATQNTIRIAQWMLGESNATSYFGCVGKDEYGDRMFKLASEGGVNIRYDVDEDL 115
Query: 132 PTGQCVCLVDASGNRTMRPCLSNAVKIQADEL 163
PTG C LV G R++ LS A K + D L
Sbjct: 116 PTGTCGVLV-VKGERSLVANLSAANKYKIDHL 146
>sp|P97328|KHK_MOUSE Ketohexokinase OS=Mus musculus GN=Khk PE=1 SV=1
Length = 298
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 79 GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVC 138
GG+ +N+ LS+ G C +G+ V++ + GVDVS++ + C C
Sbjct: 40 GGNASNSCTVLSL-LGARCAFMGSLAPGHVADFLVADFRQRGVDVSQVTWQSQGDTPCSC 98
Query: 139 LV--DASGNRTMRPCLSNAVKIQADELIAEDVKGSKVLHL 176
+ +++G+RT+ +N + A + D+ K +H+
Sbjct: 99 CIVNNSNGSRTIILYDTNLPDVSAKDFEKVDLTRFKWIHI 138
>sp|Q02974|KHK_RAT Ketohexokinase OS=Rattus norvegicus GN=Khk PE=1 SV=1
Length = 298
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 79 GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVC 138
GG+ +N+ LS+ G C +G+ V++ + GVDVS++ + C C
Sbjct: 40 GGNASNSCTVLSL-LGARCAFMGSLAHGHVADFLVADFRRRGVDVSQVAWQSQGDTPCSC 98
Query: 139 LV--DASGNRTMRPCLSNAVKIQADELIAEDVKGSKVLHL 176
+ +++G+RT+ +N + A + D+ K +H+
Sbjct: 99 CIVNNSNGSRTIILYDTNLPDVSAKDFEKVDLTRFKWIHI 138
>sp|Q65D02|IOLC_BACLD 5-dehydro-2-deoxygluconokinase OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=iolC PE=3 SV=1
Length = 325
Score = 35.0 bits (79), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 79 GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR 130
GGS N G S G+ G IG DDQ G+ + M+ +GVD S++ + +
Sbjct: 43 GGSPANIAIG-SSKLGLKTGFIGKIPDDQHGRFIETYMRNTGVDTSQMAVDK 93
>sp|A4IPB3|IOLC_GEOTN 5-dehydro-2-deoxygluconokinase OS=Geobacillus thermodenitrificans
(strain NG80-2) GN=iolC PE=3 SV=1
Length = 337
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 68 LDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRL 126
++E GGS N G++ G+ G IG DDQ G+ V ++ +G+D S +
Sbjct: 33 MEETVTFTKYVGGSPANIAIGMA-RLGMKTGFIGRVADDQMGRFIVQYLKNNGIDTSHV 90
>sp|Q8X839|FRLD_ECO57 Fructoselysine kinase OS=Escherichia coli O157:H7 GN=frlD PE=3 SV=2
Length = 261
Score = 34.3 bits (77), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 71 PSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR 130
P K +GG+ N + +G+ G I GDD G ++ GVD+S + K
Sbjct: 16 PQLNKAFSGGNAVN-VAVYCTRYGIKPGCITWVGDDDYGTKLKQDLASMGVDISHVHTKH 74
Query: 131 GPTGQ 135
G T Q
Sbjct: 75 GVTAQ 79
>sp|Q5KYR3|IOLC_GEOKA 5-dehydro-2-deoxygluconokinase OS=Geobacillus kaustophilus (strain
HTA426) GN=iolC PE=3 SV=1
Length = 335
Score = 34.3 bits (77), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 68 LDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRL 126
++E GGS N G++ G+ G IG DDQ G+ V ++ +G+D S +
Sbjct: 33 MEETMTFTKYVGGSPANIAIGMAR-LGMKTGFIGRVADDQMGRFIVRYLKNNGIDTSHV 90
>sp|Q83JB1|FRLD_SHIFL Fructoselysine kinase OS=Shigella flexneri GN=frlD PE=3 SV=1
Length = 261
Score = 33.9 bits (76), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 71 PSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR 130
P K +GG+ N + +G+ G I GDD G ++ GVD+S + K
Sbjct: 16 PQLNKAFSGGNAVN-VAVYCTRYGIQPGCITWVGDDDYGTKLKQDLARMGVDISHVHTKH 74
Query: 131 GPTGQ 135
G T Q
Sbjct: 75 GVTAQ 79
>sp|P45543|FRLD_ECOLI Fructoselysine kinase OS=Escherichia coli (strain K12) GN=frlD PE=3
SV=1
Length = 261
Score = 33.9 bits (76), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 71 PSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR 130
P K +GG+ N + +G+ G I GDD G ++ GVD+S + K
Sbjct: 16 PQLNKAFSGGNAVN-VAVYCTRYGIQPGCITWVGDDDYGTKLKQDLARMGVDISHVHTKH 74
Query: 131 GPTGQ 135
G T Q
Sbjct: 75 GVTAQ 79
>sp|O60281|ZN292_HUMAN Zinc finger protein 292 OS=Homo sapiens GN=ZNF292 PE=1 SV=3
Length = 2723
Score = 33.5 bits (75), Expect = 1.0, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 15/121 (12%)
Query: 34 DWSLLDQ----IPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGL 89
DW L + + GE SI +I+EL SEV ++D K ++ GL
Sbjct: 448 DWKTLKRQCLALMGEEA-SIVSSIDELND--SEVYEKVVDYQEESKE-------TSMNGL 497
Query: 90 SVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCV-CLVDASGNRTM 148
S G G GL+ GD++Q + + ++ G +R R + CV C + G+R +
Sbjct: 498 SGGVGANSGLLKDIGDEKQKKREIKQLRERGFISARFRNWQAYMQYCVLCDKEFLGHRIV 557
Query: 149 R 149
R
Sbjct: 558 R 558
>sp|Q4AAB0|IOLC_MYCHJ 5-dehydro-2-deoxygluconokinase OS=Mycoplasma hyopneumoniae (strain
J / ATCC 25934 / NCTC 10110) GN=iolC PE=3 SV=1
Length = 338
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 68 LDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR 127
L+ S K GGS N GLS G G+ DDQ G ++ + +D+SR++
Sbjct: 26 LENSSLFKKYIGGSAANIAIGLS-RLKNKVGFFGSVSDDQFGNFVLNVFENEKIDISRIK 84
Query: 128 MKR 130
+
Sbjct: 85 KTK 87
>sp|Q8XP78|IOLC_CLOPE 5-dehydro-2-deoxygluconokinase OS=Clostridium perfringens (strain
13 / Type A) GN=iolC PE=3 SV=1
Length = 338
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 68 LDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR 127
L E GGS N GL+ G G IG DD+ G+ V+ + G+DVS +
Sbjct: 33 LSESRNFNKYLGGSPANIAVGLAR-LGKKVGFIGKVSDDRFGEFVVNYFKKEGIDVSEI- 90
Query: 128 MKRGPTGQCVCLV 140
+ G+ + L
Sbjct: 91 -SKAKNGESLGLT 102
>sp|Q0TUZ4|IOLC_CLOP1 5-dehydro-2-deoxygluconokinase OS=Clostridium perfringens (strain
ATCC 13124 / NCTC 8237 / Type A) GN=iolC PE=3 SV=1
Length = 338
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 68 LDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR 127
L E GGS N GL+ G G IG DD+ G+ V+ + G+DVS +
Sbjct: 33 LSESRNFNKYLGGSPANIAVGLAR-LGKKVGFIGKVSDDRFGEFVVNYFKKEGIDVSEI- 90
Query: 128 MKRGPTGQCVCLV 140
+ G+ + L
Sbjct: 91 -SKAKNGESLGLT 102
>sp|D2QYP6|NNRE_PIRSD NAD(P)H-hydrate epimerase OS=Pirellula staleyi (strain ATCC 27377 /
DSM 6068 / ICPB 4128) GN=nnrE PE=3 SV=1
Length = 227
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 25 ALIDHVARVDWSLLDQI-----PGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAG 79
A+ H A DW L+D + GE G++ +AIE + S V+T +D P+ I +G
Sbjct: 118 AIATHFAEADW-LVDAMLGTGATGEPRGAMRLAIEAINQ--SSVRTLAVDLPTGIDCDSG 174
Query: 80 GSVTNTIRG 88
G+ T +R
Sbjct: 175 GAATVAVRA 183
>sp|Q898F0|IOLC_CLOTE 5-dehydro-2-deoxygluconokinase OS=Clostridium tetani (strain
Massachusetts / E88) GN=iolC PE=3 SV=1
Length = 339
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 68 LDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRL- 126
L+E GGS N GL+ G G + DDQ G V+ ++ G+D+S++
Sbjct: 33 LEESRTFTKYLGGSPGNIAVGLAR-LGKKVGFLSTVSDDQFGNFVVNYLKNEGIDISQIN 91
Query: 127 RMKRG 131
R K G
Sbjct: 92 RAKNG 96
>sp|A5YBJ5|IOLC_LACCA 5-dehydro-2-deoxygluconokinase OS=Lactobacillus casei GN=iolC PE=3
SV=1
Length = 326
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Query: 68 LDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR 127
L++ GGS N G S G G IG DDQ G M G+D S
Sbjct: 26 LEDTKTFAKFVGGSPANIAIG-SAKLGQKVGFIGKVSDDQLGHYVTQYMASVGIDTS--N 82
Query: 128 MKRGPTGQCVCLV 140
M + TG + L
Sbjct: 83 MVKDDTGHKIGLT 95
>sp|C3KDB8|HLDE_PSEFS Bifunctional protein HldE OS=Pseudomonas fluorescens (strain SBW25)
GN=hldE PE=3 SV=1
Length = 474
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 14/102 (13%)
Query: 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTM---- 148
G P L+G GDD+ + ++++ +GV R+ PT V L S ++ +
Sbjct: 63 LGAPASLVGVTGDDEAAESLANSLRGAGVRALFQRIAHQPT--IVKLRVMSRHQQLLRID 120
Query: 149 --RPCLSNAVKI--QADELIAEDVKGSKVLHLALYLKKLLFN 186
P ++A+ + Q DEL+ +G KVL L+ Y K L N
Sbjct: 121 FEEPFATDALALNGQVDELL----EGVKVLVLSDYGKGALKN 158
>sp|Q4KJA9|HLDE_PSEF5 Bifunctional protein HldE OS=Pseudomonas fluorescens (strain Pf-5 /
ATCC BAA-477) GN=hldE PE=3 SV=1
Length = 477
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTM---- 148
G P L+G GDD+ +++Q +GV R+K PT V L S ++ +
Sbjct: 63 LGAPASLVGVTGDDEAADSLANSLQGAGVRALFQRIKHQPT--IVKLRVMSRHQQLLRID 120
Query: 149 --RPCLSNAVKIQADELIAEDVKGSKVLHLALYLKKLLFN 186
P ++A+ + A+ + + G KVL L+ Y K L N
Sbjct: 121 FEEPFATDALALAAE--VDALLDGIKVLVLSDYGKGALRN 158
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,648,032
Number of Sequences: 539616
Number of extensions: 3145245
Number of successful extensions: 7880
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 7866
Number of HSP's gapped (non-prelim): 45
length of query: 209
length of database: 191,569,459
effective HSP length: 112
effective length of query: 97
effective length of database: 131,132,467
effective search space: 12719849299
effective search space used: 12719849299
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)