Query 028423
Match_columns 209
No_of_seqs 151 out of 1793
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 18:42:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028423.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028423hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e3a_A Sugar kinase protein; s 100.0 2.3E-29 7.9E-34 219.5 20.3 177 14-200 24-210 (352)
2 3uq6_A Adenosine kinase, putat 100.0 2.9E-28 9.8E-33 213.9 16.8 178 14-200 25-217 (372)
3 3otx_A Adenosine kinase, putat 100.0 1.3E-27 4.4E-32 207.2 17.4 180 12-200 4-199 (347)
4 3vas_A Putative adenosine kina 99.9 8E-27 2.7E-31 204.6 17.4 178 14-200 23-215 (370)
5 3loo_A Anopheles gambiae adeno 99.9 6.8E-26 2.3E-30 198.1 18.8 179 13-200 21-213 (365)
6 2rbc_A Sugar kinase, AGR_C_456 99.9 7.5E-25 2.6E-29 190.3 18.0 159 14-200 28-190 (343)
7 3go6_A Ribokinase RBSK; phosph 99.9 1.5E-24 5.1E-29 185.9 19.1 160 11-201 15-178 (310)
8 3ikh_A Carbohydrate kinase; tr 99.9 7E-25 2.4E-29 186.6 13.6 159 15-201 2-166 (299)
9 3ry7_A Ribokinase; transferase 99.9 2.6E-24 8.8E-29 182.8 16.2 160 15-201 2-168 (304)
10 3ljs_A Fructokinase; fructokia 99.9 3.9E-24 1.3E-28 184.7 16.6 155 13-200 2-168 (338)
11 1rkd_A Ribokinase; carbohydrat 99.9 3.7E-24 1.3E-28 182.4 15.8 160 15-202 4-170 (309)
12 1bx4_A Protein (adenosine kina 99.9 2.4E-23 8.2E-28 180.0 19.6 177 14-200 5-198 (345)
13 2hlz_A Ketohexokinase; non-pro 99.9 1.2E-23 4E-28 180.1 17.3 160 13-200 15-187 (312)
14 2fv7_A Ribokinase; structural 99.9 1.1E-23 3.6E-28 181.7 15.7 161 13-201 22-189 (331)
15 2c4e_A Sugar kinase MJ0406; tr 99.9 9.4E-24 3.2E-28 179.6 14.8 153 16-200 6-162 (302)
16 1vm7_A Ribokinase; TM0960, str 99.9 3.6E-23 1.2E-27 177.1 17.5 158 13-201 12-172 (311)
17 2abs_A Adenosine kinase, AK; r 99.9 1.9E-22 6.6E-27 177.2 20.1 178 13-200 30-218 (383)
18 3hj6_A Fructokinase, FRK; fruc 99.9 4.4E-23 1.5E-27 177.5 14.2 155 14-201 20-184 (327)
19 3h49_A Ribokinase; transferase 99.9 6.9E-23 2.3E-27 176.1 13.8 154 14-198 4-171 (325)
20 4du5_A PFKB; structural genomi 99.9 2.2E-22 7.4E-27 174.0 16.8 155 13-200 24-192 (336)
21 3iq0_A Putative ribokinase II; 99.9 4.8E-22 1.7E-26 171.1 18.8 155 15-200 3-169 (330)
22 3kzh_A Probable sugar kinase; 99.9 1.7E-22 5.7E-27 173.9 15.8 158 13-200 4-168 (328)
23 2nwh_A AGR_C_3442P, carbohydra 99.9 2.2E-22 7.5E-27 172.4 16.2 156 16-200 4-168 (317)
24 1v1a_A 2-keto-3-deoxygluconate 99.9 5.9E-22 2E-26 168.9 18.6 153 16-201 2-166 (309)
25 3ktn_A Carbohydrate kinase, PF 99.9 4.3E-22 1.5E-26 172.2 17.7 152 15-199 2-168 (346)
26 3lhx_A Ketodeoxygluconokinase; 99.9 1.4E-22 4.7E-27 173.6 13.6 147 14-200 3-170 (319)
27 2qcv_A Putative 5-dehydro-2-de 99.9 7.1E-22 2.4E-26 169.8 17.9 157 13-201 9-178 (332)
28 2pkf_A Adenosine kinase; trans 99.9 2E-22 6.8E-27 174.1 14.2 169 4-201 3-182 (334)
29 3pl2_A Sugar kinase, ribokinas 99.9 2.4E-22 8.1E-27 171.9 13.3 154 13-199 6-172 (319)
30 3bf5_A Ribokinase related prot 99.9 4.6E-22 1.6E-26 170.1 15.0 154 8-200 13-168 (306)
31 3b1n_A Ribokinase, putative; r 99.9 5.6E-22 1.9E-26 170.8 15.1 158 17-201 2-169 (326)
32 3ewm_A Uncharacterized sugar k 99.9 1.2E-21 4.1E-26 167.4 15.6 150 16-200 2-162 (313)
33 4e69_A 2-dehydro-3-deoxyglucon 99.9 9E-22 3.1E-26 169.7 13.9 149 13-200 21-186 (328)
34 3ie7_A LIN2199 protein; phosph 99.9 3.9E-21 1.3E-25 164.5 17.4 151 18-200 4-171 (320)
35 2ajr_A Sugar kinase, PFKB fami 99.9 3E-21 1E-25 166.3 15.9 157 14-200 11-184 (331)
36 4gm6_A PFKB family carbohydrat 99.9 1.9E-21 6.4E-26 168.5 14.0 154 13-199 22-189 (351)
37 1tyy_A Putative sugar kinase; 99.9 4E-21 1.4E-25 166.3 14.7 145 16-201 25-181 (339)
38 3umo_A 6-phosphofructokinase i 99.9 9.8E-21 3.3E-25 161.1 16.5 153 16-200 2-168 (309)
39 2dcn_A Hypothetical fructokina 99.9 9.3E-21 3.2E-25 161.4 16.1 151 16-200 2-164 (311)
40 3cqd_A 6-phosphofructokinase i 99.9 1.2E-20 4.3E-25 160.5 16.7 151 17-200 3-168 (309)
41 2v78_A Fructokinase; transfera 99.9 9.1E-21 3.1E-25 161.8 15.6 151 16-200 2-164 (313)
42 2f02_A Tagatose-6-phosphate ki 99.8 4.4E-20 1.5E-24 158.4 17.1 152 15-200 2-167 (323)
43 2jg1_A Tagatose-6-phosphate ki 99.8 1.3E-19 4.3E-24 156.2 17.1 151 16-200 21-185 (330)
44 4e84_A D-beta-D-heptose 7-phos 99.8 4.8E-20 1.7E-24 160.6 13.6 159 12-201 50-223 (352)
45 2qhp_A Fructokinase; NP_810670 99.8 2.3E-19 7.9E-24 151.6 13.9 140 15-200 3-154 (296)
46 2abq_A Fructose 1-phosphate ki 99.8 7.8E-19 2.7E-23 149.3 15.8 147 19-200 4-163 (306)
47 2jg5_A Fructose 1-phosphate ki 99.8 1.2E-18 4.1E-23 147.9 16.1 148 18-200 3-163 (306)
48 2afb_A 2-keto-3-deoxygluconate 99.8 3.4E-18 1.2E-22 148.0 16.7 127 73-201 38-179 (351)
49 3kd6_A Carbohydrate kinase, PF 99.7 9E-17 3.1E-21 137.3 14.5 143 15-199 2-150 (313)
50 1vk4_A PFKB carbohydrate kinas 99.7 1.1E-16 3.6E-21 135.9 10.7 120 73-200 30-153 (298)
51 2yxt_A Pyridoxal kinase; beta 96.8 0.00025 8.6E-09 59.7 0.8 84 96-199 12-114 (312)
52 2ddm_A Pyridoxine kinase; pyri 95.3 0.012 4.2E-07 48.5 3.8 91 92-199 18-126 (283)
53 3drw_A ADP-specific phosphofru 93.9 0.21 7.2E-06 44.8 8.4 89 13-110 25-148 (474)
54 1gc5_A ADP-dependent glucokina 92.9 0.065 2.2E-06 48.0 3.6 36 76-117 116-153 (467)
55 1l2l_A ADP-dependent glucokina 91.9 0.14 4.8E-06 45.7 4.3 29 76-105 111-141 (457)
56 1ua4_A Glucokinase, ADP-depend 89.5 0.66 2.3E-05 41.3 6.5 120 75-200 107-268 (455)
57 2fq6_A Cystathionine beta-lyas 77.5 23 0.00077 30.4 10.9 35 170-204 167-211 (415)
58 3ri6_A O-acetylhomoserine sulf 77.0 19 0.00065 31.2 10.3 36 170-205 167-210 (430)
59 3ndn_A O-succinylhomoserine su 74.0 21 0.00073 30.5 9.8 35 170-204 166-208 (414)
60 3qhx_A Cystathionine gamma-syn 71.6 23 0.00077 29.9 9.2 26 181-206 170-195 (392)
61 3nmy_A Xometc, cystathionine g 70.4 26 0.00089 29.8 9.4 37 170-206 152-196 (400)
62 1jxh_A Phosphomethylpyrimidine 67.9 1.3 4.5E-05 36.3 0.5 30 171-200 95-129 (288)
63 1qgn_A Protein (cystathionine 57.1 65 0.0022 27.9 9.5 35 172-206 202-244 (445)
64 1e5e_A MGL, methionine gamma-l 44.1 1.4E+02 0.0048 24.9 11.2 36 170-205 147-191 (404)
65 1gc0_A Methionine gamma-lyase; 44.1 1.4E+02 0.0047 24.8 9.4 35 170-204 150-192 (398)
66 3acz_A Methionine gamma-lyase; 43.8 1.4E+02 0.0047 24.7 10.8 36 170-205 144-187 (389)
67 2re2_A Uncharacterized protein 42.4 16 0.00055 26.5 2.7 39 79-124 65-103 (136)
68 2cb1_A O-acetyl homoserine sul 36.1 1.9E+02 0.0064 24.1 10.1 35 170-204 140-182 (412)
69 1ibj_A CBL, cystathionine beta 32.7 1.8E+02 0.0063 25.0 8.5 36 169-204 216-259 (464)
70 2p7o_A Glyoxalase family prote 32.7 72 0.0025 21.4 4.9 45 109-153 79-123 (133)
71 3tz6_A Aspartate-semialdehyde 30.3 99 0.0034 26.0 6.1 86 96-199 3-93 (344)
72 3lvm_A Cysteine desulfurase; s 29.8 1.6E+02 0.0056 24.1 7.5 31 170-200 163-201 (423)
73 3cog_A Cystathionine gamma-lya 29.8 2.4E+02 0.0081 23.5 8.5 35 170-204 151-194 (403)
74 1mkz_A Molybdenum cofactor bio 28.9 1.3E+02 0.0043 22.4 6.0 39 83-122 31-71 (172)
75 2dha_A FLJ20171 protein; RRM d 28.8 96 0.0033 21.7 5.0 43 77-120 6-48 (123)
76 3e5d_A Putative glyoxalase I; 28.7 1.3E+02 0.0043 19.8 6.1 41 109-149 85-125 (127)
77 2rfv_A Methionine gamma-lyase; 28.4 2.5E+02 0.0084 23.1 10.6 35 170-204 149-191 (398)
78 3l7t_A SMU.1112C, putative unc 27.5 1.3E+02 0.0045 19.7 5.5 40 109-148 92-131 (134)
79 3ghj_A Putative integron gene 26.8 1.2E+02 0.0042 20.9 5.3 41 109-149 98-138 (141)
80 3iwt_A 178AA long hypothetical 26.4 64 0.0022 24.0 3.9 35 95-130 16-63 (178)
81 4hvk_A Probable cysteine desul 25.9 1.8E+02 0.006 23.2 6.8 17 182-199 158-174 (382)
82 3itw_A Protein TIOX; bleomycin 25.8 1.5E+02 0.0051 20.0 5.6 43 110-152 80-122 (137)
83 2yrr_A Aminotransferase, class 25.1 1.8E+02 0.0061 22.9 6.6 32 170-201 124-163 (353)
84 2ywl_A Thioredoxin reductase r 24.5 81 0.0028 22.7 4.1 42 82-124 13-74 (180)
85 3h7a_A Short chain dehydrogena 24.5 1E+02 0.0034 24.0 4.8 48 78-128 16-63 (252)
86 3lyl_A 3-oxoacyl-(acyl-carrier 24.3 1.1E+02 0.0038 23.3 5.1 48 78-128 14-61 (247)
87 3uh9_A Metallothiol transferas 24.3 1.1E+02 0.0038 20.9 4.7 44 109-152 76-119 (145)
88 4fn4_A Short chain dehydrogena 23.6 1.2E+02 0.004 24.2 5.1 47 80-129 18-64 (254)
89 3ucx_A Short chain dehydrogena 23.2 1.3E+02 0.0046 23.3 5.4 48 78-128 20-67 (264)
90 3r1i_A Short-chain type dehydr 23.0 1.2E+02 0.004 24.1 5.0 47 79-128 42-88 (276)
91 3ffr_A Phosphoserine aminotran 22.8 2.8E+02 0.0096 21.8 8.8 51 73-127 63-113 (362)
92 3kgw_A Alanine-glyoxylate amin 22.8 2.9E+02 0.01 22.0 8.5 99 75-200 78-186 (393)
93 2ctz_A O-acetyl-L-homoserine s 22.2 3.4E+02 0.012 22.6 9.3 32 170-201 144-183 (421)
94 3uf0_A Short-chain dehydrogena 22.0 1.6E+02 0.0054 23.2 5.7 46 79-128 41-86 (273)
95 3qfa_A Thioredoxin reductase 1 21.9 1E+02 0.0035 27.0 4.8 48 75-124 213-268 (519)
96 2p25_A Glyoxalase family prote 21.7 1.7E+02 0.0058 18.9 6.0 39 110-148 85-123 (126)
97 3rag_A Uncharacterized protein 21.6 77 0.0026 25.5 3.6 44 75-119 20-66 (242)
98 3fwy_A Light-independent proto 21.5 73 0.0025 26.3 3.5 20 82-102 65-84 (314)
99 1ebd_A E3BD, dihydrolipoamide 21.5 94 0.0032 26.5 4.4 44 81-125 181-230 (455)
100 2pjk_A 178AA long hypothetical 21.4 1.8E+02 0.0063 21.7 5.6 41 82-123 42-84 (178)
101 2is8_A Molybdopterin biosynthe 20.9 1.6E+02 0.0055 21.6 5.1 40 82-122 23-64 (164)
102 2re1_A Aspartokinase, alpha an 20.7 2.2E+02 0.0076 20.7 5.9 42 96-139 102-148 (167)
103 2gf3_A MSOX, monomeric sarcosi 20.7 1E+02 0.0036 25.1 4.4 23 79-102 12-34 (389)
104 1rdu_A Conserved hypothetical 20.7 30 0.001 23.9 0.9 40 79-124 48-87 (116)
105 3kbq_A Protein TA0487; structu 20.6 1.3E+02 0.0046 22.6 4.6 34 82-118 25-58 (172)
106 2raf_A Putative dinucleotide-b 20.5 2.6E+02 0.0089 21.0 6.5 25 100-124 22-46 (209)
107 3dgh_A TRXR-1, thioredoxin red 20.4 1.1E+02 0.0038 26.3 4.7 42 82-125 199-246 (483)
108 3sju_A Keto reductase; short-c 20.1 1.5E+02 0.0051 23.4 5.1 46 80-128 35-80 (279)
No 1
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=99.97 E-value=2.3e-29 Score=219.46 Aligned_cols=177 Identities=22% Similarity=0.296 Sum_probs=161.4
Q ss_pred CCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhc
Q 028423 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rL 93 (209)
++++|+|+| ++++|+++++++.+++++..++|.+++++.+..+++++++. +....+||+++|+|++|+ ||
T Consensus 24 ~~~~v~~iG-~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~--------~~~~~~GG~~~N~A~~la-~L 93 (352)
T 4e3a_A 24 TRFDVLTVG-NAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMG--------PALEASGGSAGNTAAGVA-NL 93 (352)
T ss_dssp CSEEEEEEC-CCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSC--------SCEEEECCHHHHHHHHHH-HH
T ss_pred CcccEEEEC-CceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhh--------hccEecCCHHHHHHHHHH-Hc
Confidence 468999999 99999999999999999989999999999999999998753 568899999999999999 89
Q ss_pred CCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEeeccccccCCCccccchhhcCCcc
Q 028423 94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSK 172 (209)
Q Consensus 94 G~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~~~i~~~d 172 (209)
|.++.|+|+||+|.+|+++++.|++.||+++++.+.+ .+|+.|+++++++|+|+++.++++...+++++++.+.+++++
T Consensus 94 G~~~~~ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~~~~~~~~ 173 (352)
T 4e3a_A 94 GGKAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEADVVADAK 173 (352)
T ss_dssp TCCEEEECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCHHHHHTEE
T ss_pred CCCeEEEEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCHHHHhhCC
Confidence 9999999999999999999999999999999998765 489999999999999999999998889999999888899999
Q ss_pred EEEEeCCcc---------HHHHHHHHhcCCeEEEecC
Q 028423 173 VLHLALYLK---------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 173 ~v~i~g~~~---------~~~~~~ar~~g~~vsfd~~ 200 (209)
++|++||++ ...++.||++|++|+||..
T Consensus 174 ~v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 210 (352)
T 4e3a_A 174 VTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLS 210 (352)
T ss_dssp EEEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 999999863 2345678999999999974
No 2
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=99.96 E-value=2.9e-28 Score=213.85 Aligned_cols=178 Identities=18% Similarity=0.254 Sum_probs=154.4
Q ss_pred CCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhc
Q 028423 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rL 93 (209)
+...|++|| |++||++++++++||+++..++|.+++++ ++...++.++.+. .+....+||+++|+|++++ +|
T Consensus 25 ~~~~v~giG-nalvDi~~~v~d~~l~~~~l~kg~m~l~~-~~~~~~~~~~~~~-----~~~~~~~GGsa~N~a~~la-~L 96 (372)
T 3uq6_A 25 SEGYVFGMG-NPLLDIIVDADDFMYRKYNLKKDNIVLAE-EKHMTIYDEIQKK-----KKLNYIAGGATLNTVKMIQ-WI 96 (372)
T ss_dssp CTTCEEEEE-CCEEEEEEECCTHHHHHTTCCTTEEEECC-GGGTTHHHHHHTS-----SSCEEEECCHHHHHHHHHH-HH
T ss_pred CCCeEEEEC-CceeeEEEEeCHHHHHHcCCCCCceEEcC-HHHHHHHHHHhcc-----CCeEEeCCcHHHHHHHHHH-Hc
Confidence 345599999 99999999999999999999999999998 4556777777654 3678899999999999999 79
Q ss_pred CCC---eEEEEEecCChhHHHHHHHHHhCCCccceeEecCC-CCeeEEEEEcCCCCeeEeeccccccCCCccccch----
Q 028423 94 GVP---CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA---- 165 (209)
Q Consensus 94 G~~---~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~-~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~---- 165 (209)
|.+ +.|+|+||+|.+|+++++.|++.||+++++...++ +|+.|+++++ +|+|+++++.+++..+++++++.
T Consensus 97 G~~~~~~~fiG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~~ga~~~l~~~~i~~~~~~ 175 (372)
T 3uq6_A 97 IQKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDLSLAHIEQPHVW 175 (372)
T ss_dssp HCSTTSEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHHHHTSHHHH
T ss_pred CCCCCcEEEEeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEeccchhhcchhhhhhhhHH
Confidence 965 89999999999999999999999999999887754 7899988876 89999999999999999887763
Q ss_pred hhcCCccEEEEeCCccHH-------HHHHHHhcCCeEEEecC
Q 028423 166 EDVKGSKVLHLALYLKKL-------LFNLARDSLSSFSFYSI 200 (209)
Q Consensus 166 ~~i~~~d~v~i~g~~~~~-------~~~~ar~~g~~vsfd~~ 200 (209)
+.+++++++|++||.++. ..+.|+++|++++||-.
T Consensus 176 ~~i~~a~~~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ldls 217 (372)
T 3uq6_A 176 SLVEKAQVYYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLS 217 (372)
T ss_dssp HHHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHhhcccEEEEecccccccHHHHHHHHHHHHHcCCeEeeccc
Confidence 468899999999998642 34667999999999963
No 3
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=99.95 E-value=1.3e-27 Score=207.24 Aligned_cols=180 Identities=18% Similarity=0.254 Sum_probs=154.1
Q ss_pred cCCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHH
Q 028423 12 ASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSV 91 (209)
Q Consensus 12 ~~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~ 91 (209)
++.+++|+++| ++++|+++.++++||++++.++|...+++ ++....+.++.. .......+||+++|+|++++
T Consensus 4 ~~~~~~v~~iG-~~~lD~~~~v~~~~l~~~~l~~g~~~l~~-~~~~p~~~~~~~-----~~~~~~~~GG~~~N~a~~la- 75 (347)
T 3otx_A 4 ASAPLRVYVQC-NPLLDVSAHVSDEFLVKYGLERGTAILLS-ERQKGIFDDIEK-----MPNVRYVPGGSGLNVARVAQ- 75 (347)
T ss_dssp --CCCCEEEEC-CCEEEEEEECCHHHHHHTTCCTTCEEECC-GGGTTHHHHHHT-----STTCEEEECCHHHHHHHHHH-
T ss_pred CcCCCcEEEEC-CceeeEEEecCHHHHHHcCCCCCceEEcC-HHHHHHHHHHhc-----cCCeEEecCCHHHHHHHHHH-
Confidence 46778999999 99999999999999999999999999998 444445554432 23688999999999999999
Q ss_pred hc----CCC-eEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeeccccccCCCccccch-
Q 028423 92 GF----GVP-CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA- 165 (209)
Q Consensus 92 rL----G~~-~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~- 165 (209)
+| |.+ +.|+|+||+|.+|+.+++.|++.||+++++...+.+|+.|+++++ +|+|+++.+++++..+++++++.
T Consensus 76 ~L~~~~G~~~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~-~g~r~~~~~~ga~~~~~~~~~~~~ 154 (347)
T 3otx_A 76 WMQQAYKGKFVTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCIT-GKERTLVADLGAANHLSSEHMRSP 154 (347)
T ss_dssp HTTGGGTTSSEEEECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEE-TTEEEEEEEEEGGGGCCHHHHTSH
T ss_pred HhcccCCCCeEEEEEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEE-CCceeeeechhhhhcCCHHHcCch
Confidence 79 999 999999999999999999999999999998654568999999998 99999999999888898887763
Q ss_pred ---hhcCCccEEEEeCCccH-------HHHHHHHhcCCeEEEecC
Q 028423 166 ---EDVKGSKVLHLALYLKK-------LLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 166 ---~~i~~~d~v~i~g~~~~-------~~~~~ar~~g~~vsfd~~ 200 (209)
+.+++++++|++|+.+. ..++.||++|+++++|..
T Consensus 155 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~ 199 (347)
T 3otx_A 155 AVVRAMDESRIFYFSGFTLTVDVNHVLQACRKAREVDGLFMINLS 199 (347)
T ss_dssp HHHHHHHHCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhHHHHhhCCEEEEeeeecccCHHHHHHHHHHHHHhCCEEEeeCc
Confidence 57889999999998642 345678999999999974
No 4
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.95 E-value=8e-27 Score=204.64 Aligned_cols=178 Identities=18% Similarity=0.249 Sum_probs=153.7
Q ss_pred CCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhc
Q 028423 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rL 93 (209)
+..+|+++| ++++|+++.++++||+++..++|...+++ ++..+...+... .......+||+++|+|++|+ +|
T Consensus 23 ~~~~v~~iG-~~~vD~~~~v~~~~l~~~~l~~g~~~l~~-~~~~P~~ge~~~-----~~~~~~~~GG~~~N~A~~la-~L 94 (370)
T 3vas_A 23 SEGYVFGMG-NPLLDIIVDADDFMYRKYNLKKDNIVLAE-EKHMTIYDEIQK-----KKKLNYIAGGATLNTVKMIQ-WI 94 (370)
T ss_dssp CTTCEEEEE-CCEEEEEEECCTHHHHHTTCCTTEEEECC-GGGTHHHHHHTT-----SSSCEEEEECHHHHHHHHHH-HH
T ss_pred CCccEEEEC-CcceeEEEecCHHHHHHcCCCCCceEEcc-HHHHHHHHHHhh-----cCCeEEecCCHHHHHHHHHH-Hh
Confidence 457899999 99999999999999999999999999987 344444444321 23788999999999999999 89
Q ss_pred ---CCCeEEEEEecCChhHHHHHHHHHhCCCccceeEec-CCCCeeEEEEEcCCCCeeEeeccccccCCCccccch----
Q 028423 94 ---GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMK-RGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA---- 165 (209)
Q Consensus 94 ---G~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~-~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~---- 165 (209)
|.++.|+|.||+|.+|+++++.|++.||+++++... +.+|+.|+++++ +|+|+++.+++++..+++++++.
T Consensus 95 ~~~G~~~~~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~~ga~~~l~~~~~~~~~~~ 173 (370)
T 3vas_A 95 IQKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDLSLAHIEQPHVW 173 (370)
T ss_dssp HCCTTCEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHHHHTSHHHH
T ss_pred cCCCCcEEEEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEccchhhhCCHHHcCchhhH
Confidence 999999999999999999999999999999999874 568999999998 89999999999888899888764
Q ss_pred hhcCCccEEEEeCCccH-------HHHHHHHhcCCeEEEecC
Q 028423 166 EDVKGSKVLHLALYLKK-------LLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 166 ~~i~~~d~v~i~g~~~~-------~~~~~ar~~g~~vsfd~~ 200 (209)
+.++++|++|++|+.+. ..++.||++|+++++|..
T Consensus 174 ~~~~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~ 215 (370)
T 3vas_A 174 SLVEKAQVYYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLS 215 (370)
T ss_dssp HHHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHhhCCEEEEEeeeccCCHHHHHHHHHHHHHcCCEEEEECC
Confidence 56889999999998753 345677999999999974
No 5
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=6.8e-26 Score=198.13 Aligned_cols=179 Identities=22% Similarity=0.309 Sum_probs=151.0
Q ss_pred CCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHh
Q 028423 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~r 92 (209)
.++++|+++| ++++|+++.+++.||+++..++|...+.+ +.....+.++... ......+||+++|+|++++ +
T Consensus 21 ~~~~~v~~iG-~~~vD~~~~v~~~~l~~~~l~~g~~~l~~-~~~~p~~~e~~~~-----~~~~~~~GG~~~N~a~~~~-~ 92 (365)
T 3loo_A 21 LRDGMLVGLG-NPLLDISAVVEKDLLNKYDMQPNNAILAE-EKHMPMYQELIEK-----YQAEYIAGGSVQNSLRVAQ-W 92 (365)
T ss_dssp CCTTSEEEEC-CCEEEEEEECCHHHHHHTTCCSSEEEECC-GGGTHHHHHHHHH-----HCCEEEEECHHHHHHHHHH-H
T ss_pred CCCccEEEEC-CCeEeEEEecCHHHHHHcCCCCCCceech-hHHHHHHHHHhhc-----CCeEEecCCHHHHHHHHHH-H
Confidence 4677899999 99999999999999999999999988754 3333344433211 1678999999999999999 6
Q ss_pred c---CCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeeccccccCCCccccch----
Q 028423 93 F---GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA---- 165 (209)
Q Consensus 93 L---G~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~---- 165 (209)
| |.++.++|+||+|.+|+++++.|++.||+++++...+.+|+.|+++++ +|+|+++.+++++..+++++++.
T Consensus 93 L~~lG~~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~-~~~r~~~~~~ga~~~~~~~~~~~~~~~ 171 (365)
T 3loo_A 93 ILQRPRTAIFFGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVT-GTQRSLCANLAAANDFTPEHLRSDGNR 171 (365)
T ss_dssp HHTCTTSEEEEEEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEE-TTEEEEEEECGGGGGCCGGGGGSHHHH
T ss_pred hhcCCCcEEEEEEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEE-CCceEEEeccchHhhCCHhHcCchhhH
Confidence 7 999999999999999999999999999999999875558999999998 89999999999988999888764
Q ss_pred hhcCCccEEEEeCCccH-------HHHHHHHhcCCeEEEecC
Q 028423 166 EDVKGSKVLHLALYLKK-------LLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 166 ~~i~~~d~v~i~g~~~~-------~~~~~ar~~g~~vsfd~~ 200 (209)
+.++++|++|++||.+. ..++.||++|+++++|..
T Consensus 172 ~~~~~~~~v~i~G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~ 213 (365)
T 3loo_A 172 AYLQGAQFFYVSGFFFTVSFESALSVAKEAAATGRMFMMNLS 213 (365)
T ss_dssp HHHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHhhCCEEEEeeeeccCCHHHHHHHHHHHHHcCCEEEEECC
Confidence 56889999999998753 234667899999999963
No 6
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=7.5e-25 Score=190.26 Aligned_cols=159 Identities=20% Similarity=0.303 Sum_probs=136.0
Q ss_pred CCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhc
Q 028423 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rL 93 (209)
++++|+++| ++++|+++.+ +++|.+++.. . .......+||+++|+|++|+ ||
T Consensus 28 ~~~~i~viG-~~~iD~~~~~-----~~~p~~~~~~-~--------------------~~~~~~~~GG~~~NvA~~la-~L 79 (343)
T 2rbc_A 28 GGKHVLCVG-AAVLDTLFRV-----ADMPKGEGKV-L--------------------PYEVLQIAEGMASSAAYAVH-RM 79 (343)
T ss_dssp CCCEEEEES-CCEEEEEEEC-----SSCCCSSSCC-C--------------------CSEEEEEEECHHHHHHHHHH-HT
T ss_pred cCCeEEEEC-cceEEEEeec-----CCCCCCCCeE-e--------------------eeeeEEcCCcHHHHHHHHHH-Hc
Confidence 356899999 9999999999 6777654321 1 12578899999999999999 89
Q ss_pred CCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEeeccccccCCCccccchhhcCCcc
Q 028423 94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSK 172 (209)
Q Consensus 94 G~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~~~i~~~d 172 (209)
|.++.++|.||+|.+|+++++.|++.|||++++.+.+ .+|+.++++++++|+|+++.+++++..+++++++.+.++++|
T Consensus 80 G~~~~~i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~~~~l~~~~ 159 (343)
T 2rbc_A 80 GGRASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFD 159 (343)
T ss_dssp TCEEEEECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCCHHHHTTCS
T ss_pred CCceEEEEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcccCChhHhcHhhhCCCC
Confidence 9999999999999999999999999999999998764 489999999998999999888887777777777767789999
Q ss_pred EEEEeCCccH---HHHHHHHhcCCeEEEecC
Q 028423 173 VLHLALYLKK---LLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 173 ~v~i~g~~~~---~~~~~ar~~g~~vsfd~~ 200 (209)
+||++++.++ ..++.+|+.|++|+||..
T Consensus 160 ~v~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~ 190 (343)
T 2rbc_A 160 AVLVDVRWPELALDVLTVARALGKPAILDGD 190 (343)
T ss_dssp EEEECSSSHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEcCCCHHHHHHHHHHHHHCCCEEEEECC
Confidence 9999998764 345677889999999974
No 7
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=99.93 E-value=1.5e-24 Score=185.86 Aligned_cols=160 Identities=18% Similarity=0.236 Sum_probs=134.5
Q ss_pred ccCCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHH
Q 028423 11 EASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLS 90 (209)
Q Consensus 11 ~~~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la 90 (209)
-.++.++|+++| ++++|+++.+ +++|.++.. .. .......+||+++|+|++|+
T Consensus 15 ~~~mm~~i~viG-~~~iD~~~~v-----~~~p~~g~~-~~--------------------~~~~~~~~GG~~~NvA~~la 67 (310)
T 3go6_A 15 VGPMAPRVCVVG-SVNMDLTFVV-----DALPRPGET-VL--------------------AASLTRTPGGKGANQAVAAA 67 (310)
T ss_dssp ----CCEEEEEC-CCEEEEEEEC-----SSCCCTTCC-CC--------------------CSEEEEEEECHHHHHHHHHH
T ss_pred cccccCCEEEEC-CceEEEEEec-----CCCCCCCCe-EE--------------------ecceeecCCCHHHHHHHHHH
Confidence 456788999999 9999999999 788865432 11 12678999999999999999
Q ss_pred HhcCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeeccccccCCCccccchhhcCC
Q 028423 91 VGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKG 170 (209)
Q Consensus 91 ~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~~~i~~ 170 (209)
|||.++.++|.+|+|.+|+++++.|++.||+++++...+++|+.++++++++|+|+++.++++...++ ++ .+.+++
T Consensus 68 -~LG~~~~~i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~--~~-~~~l~~ 143 (310)
T 3go6_A 68 -RAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT--PV-PSAVAN 143 (310)
T ss_dssp -HTTCEEEEECEECSSHHHHHHHHHHHHTTCBCTTCEECSSCCEEEEEEECTTSCEEEEEECGGGGGCC--CC-TTTTTT
T ss_pred -HCCCCeEEEEEECCCHHHHHHHHHHHHcCCccceeEecCCCCCEEEEEEcCCCCEEEEecCChhhhHH--HH-HHHhhc
Confidence 89999999999999999999999999999999999766679999999999899999999888777776 44 567899
Q ss_pred ccEEEEeCCccH----HHHHHHHhcCCeEEEecCc
Q 028423 171 SKVLHLALYLKK----LLFNLARDSLSSFSFYSII 201 (209)
Q Consensus 171 ~d~v~i~g~~~~----~~~~~ar~~g~~vsfd~~~ 201 (209)
+|++|+++.... ..++.+|+.|++|+||..+
T Consensus 144 ~~~v~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 178 (310)
T 3go6_A 144 CDVLLTQLEIPVATALAAARAAQSADAVVMVNASP 178 (310)
T ss_dssp CSEEEECSSSCHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCCc
Confidence 999999986643 3557789999999999864
No 8
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=99.92 E-value=7e-25 Score=186.65 Aligned_cols=159 Identities=19% Similarity=0.190 Sum_probs=135.8
Q ss_pred CCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcC
Q 028423 15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (209)
Q Consensus 15 ~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG 94 (209)
.++|+++| ++++|+++.+ +++|.++. .... ......+||+++|+|++|+ |||
T Consensus 2 ~~~i~viG-~~~iD~~~~~-----~~~p~~g~-~~~~--------------------~~~~~~~GG~~~NvA~~la-~lG 53 (299)
T 3ikh_A 2 SLRVYVTG-NITVDETWSI-----PDIPKKGA-SIHG--------------------VKVSQDIGGKGANQAIILS-RCG 53 (299)
T ss_dssp CCCEEEEC-CCEEEEEEEC-----SSCCCTTC-EEEC--------------------EEEEEEEECHHHHHHHHHH-HTT
T ss_pred CceEEEEC-ceEEEEEEec-----CCCCCCCC-eEEe--------------------eeeeeccCCHHHHHHHHHH-HCC
Confidence 46899999 9999999999 78887642 2221 2578999999999999999 899
Q ss_pred CCeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeeccccccCCCccccc--hhhcCCcc
Q 028423 95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELI--AEDVKGSK 172 (209)
Q Consensus 95 ~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~--~~~i~~~d 172 (209)
.++.++|.+|+|.+|+.+++.|++.||+++++...+.+|+.++++++++|+|+++.++++...+++++++ .+.++++|
T Consensus 54 ~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 133 (299)
T 3ikh_A 54 IETRLIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIPHMADAVAGD 133 (299)
T ss_dssp CCEEEECCCCSSHHHHHHHHHGGGSSCEEESSSCCSSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGGGGTTCCTTC
T ss_pred CCeEEEEEECCCHHHHHHHHHHHHcCCceeeeEecCCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHHHHhhhccCC
Confidence 9999999999999999999999999999999864455899999999989999999888887788887765 34688999
Q ss_pred EEEEeCCccH----HHHHHHHhcCCeEEEecCc
Q 028423 173 VLHLALYLKK----LLFNLARDSLSSFSFYSII 201 (209)
Q Consensus 173 ~v~i~g~~~~----~~~~~ar~~g~~vsfd~~~ 201 (209)
++|+++.... ..++.+|+.|++|+||...
T Consensus 134 ~v~~~g~~~~~~~~~~~~~a~~~g~~v~~D~~~ 166 (299)
T 3ikh_A 134 ILLQQGNFSLDKTRALFQYARSRGMTTVFNPSP 166 (299)
T ss_dssp EEEECSCSCHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred EEEECCCCCHHHHHHHHHHHHHcCCEEEEcccc
Confidence 9999987653 3456789999999999754
No 9
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.92 E-value=2.6e-24 Score=182.78 Aligned_cols=160 Identities=14% Similarity=0.194 Sum_probs=136.3
Q ss_pred CCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcC
Q 028423 15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (209)
Q Consensus 15 ~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG 94 (209)
.++|+++| ++++|+++.+ +++|.++..... .......+||+++|+|++|+ |||
T Consensus 2 m~~v~viG-~~~~D~~~~~-----~~~p~~g~~~~~--------------------~~~~~~~~GG~~~NvA~~la-~lG 54 (304)
T 3ry7_A 2 TNKVVILG-STNVDQFLTV-----ERYAQPGETLHV--------------------EEAQKAFGGGKGANQAIATA-RMQ 54 (304)
T ss_dssp CCEEEEEC-CCEEEEEEEC-----SSCCCTTCCCCC--------------------SSCCEEEEECHHHHHHHHHH-HTT
T ss_pred CCcEEEEc-cceeEEEEec-----cCCCCCCCceec--------------------ccceeecCCCHHHHHHHHHH-HCC
Confidence 46899999 9999999998 788866432101 12688999999999999999 899
Q ss_pred CCeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEeeccccccCCCccccch--hhcCCc
Q 028423 95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--EDVKGS 171 (209)
Q Consensus 95 ~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~--~~i~~~ 171 (209)
.++.++|.+|+|.+|+++++.|++.||+++++.+.+ .+|+.++++++++|+|+++.++++...+++++++. +.++++
T Consensus 55 ~~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~~~~~ 134 (304)
T 3ry7_A 55 ADTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVINAKDAIINA 134 (304)
T ss_dssp CEEEEECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHTTHHHHHTC
T ss_pred CCeEEEEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHHHHHHhccC
Confidence 999999999999999999999999999999998764 58999999999889999999988888888877653 468899
Q ss_pred cEEEEeCCccH----HHHHHHHhcCCeEEEecCc
Q 028423 172 KVLHLALYLKK----LLFNLARDSLSSFSFYSII 201 (209)
Q Consensus 172 d~v~i~g~~~~----~~~~~ar~~g~~vsfd~~~ 201 (209)
|++|+++.... ..++.+|++|++|+||...
T Consensus 135 ~~v~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~ 168 (304)
T 3ry7_A 135 DFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAP 168 (304)
T ss_dssp SEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred CEEEEcCCCCHHHHHHHHHHHHHcCCEEEEeCCc
Confidence 99999986643 3557789999999999744
No 10
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.92 E-value=3.9e-24 Score=184.67 Aligned_cols=155 Identities=19% Similarity=0.222 Sum_probs=132.0
Q ss_pred CCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHh
Q 028423 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~r 92 (209)
+++++|+++| .+++|++... +++|.+ .......+||+++|+|++|+ |
T Consensus 2 ~~~~~v~viG-~~~iD~~~~~-----~~~~~~--------------------------~~~~~~~~GG~~~NvA~~la-~ 48 (338)
T 3ljs_A 2 SLKKTILCFG-EALIDMLAQP-----LVKKGM--------------------------PRAFLQCAGGAPANVAVAVA-R 48 (338)
T ss_dssp --CCEEEEES-CCEEEEEECC-----CSSTTS--------------------------CCCEEEEEECHHHHHHHHHH-H
T ss_pred CCCCCEEEEC-hhhhheeccC-----CCCccc--------------------------hhceeecCCChHHHHHHHHH-h
Confidence 3578999999 9999999998 445532 02688999999999999999 8
Q ss_pred cCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEeecc--ccccCCCccccchhhcC
Q 028423 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDVK 169 (209)
Q Consensus 93 LG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~~~~--g~~~~l~~~~i~~~~i~ 169 (209)
||.++.++|.||+|.+|+++++.|++.||+++++.+.+ .+|+.++++++++|+|++.++. ++...+++++++.+.++
T Consensus 49 LG~~~~~ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~~ 128 (338)
T 3ljs_A 49 LGGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFS 128 (338)
T ss_dssp HTCCEEEESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHHH
T ss_pred CCCCEEEEeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHhc
Confidence 99999999999999999999999999999999998764 5899999999988999987665 66667888888877889
Q ss_pred CccEEEEeCCcc---------HHHHHHHHhcCCeEEEecC
Q 028423 170 GSKVLHLALYLK---------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 170 ~~d~v~i~g~~~---------~~~~~~ar~~g~~vsfd~~ 200 (209)
++|++|++++.+ ...++.+|+.|++|+||..
T Consensus 129 ~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~ 168 (338)
T 3ljs_A 129 DALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLN 168 (338)
T ss_dssp TEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 999999998753 2345677899999999973
No 11
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.92 E-value=3.7e-24 Score=182.39 Aligned_cols=160 Identities=15% Similarity=0.220 Sum_probs=135.0
Q ss_pred CCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcC
Q 028423 15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (209)
Q Consensus 15 ~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG 94 (209)
.++|+++| ++++|+++.+ +++|.++.. .. .......+||+++|+|++|+ |||
T Consensus 4 ~~~v~viG-~~~iD~~~~~-----~~~p~~g~~-~~--------------------~~~~~~~~GG~~~N~A~~la-~lG 55 (309)
T 1rkd_A 4 AGSLVVLG-SINADHILNL-----QSFPTPGET-VT--------------------GNHYQVAFGGKGANQAVAAG-RSG 55 (309)
T ss_dssp CCEEEEEC-CCEEEEEEEC-----SSCCCTTCC-CC--------------------CCCEEEEEECHHHHHHHHHH-HHT
T ss_pred CCeEEEEC-cceEeEEEec-----CCCCCCCCe-ee--------------------cCceeecCCCHHHHHHHHHH-hCC
Confidence 45899999 9999999998 778865321 11 13678899999999999999 899
Q ss_pred CCeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEeeccccccCCCccccch--hhcCCc
Q 028423 95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--EDVKGS 171 (209)
Q Consensus 95 ~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~--~~i~~~ 171 (209)
.++.++|.+|+|.+|+++++.|++.||+++++.+.+ .+|+.++++++++|+|+++.+++++..+++++++. +.++++
T Consensus 56 ~~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 135 (309)
T 1rkd_A 56 ANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANA 135 (309)
T ss_dssp CEEEEEEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHTTHHHHHHC
T ss_pred CceEEEEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHHHHHhcccC
Confidence 999999999999999999999999999999998764 48999999999889999998888877888777653 467889
Q ss_pred cEEEEeCCccH----HHHHHHHhcCCeEEEecCcc
Q 028423 172 KVLHLALYLKK----LLFNLARDSLSSFSFYSIII 202 (209)
Q Consensus 172 d~v~i~g~~~~----~~~~~ar~~g~~vsfd~~~~ 202 (209)
|++|+++..+. ..++.+|++|++++||....
T Consensus 136 ~~v~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~ 170 (309)
T 1rkd_A 136 SALLMQLESPLESVMAAAKIAHQNKTIVALNPAPA 170 (309)
T ss_dssp SEEEECSSSCHHHHHHHHHHHHHTTCEEEECCCSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 99999887653 34566789999999997543
No 12
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=99.91 E-value=2.4e-23 Score=180.03 Aligned_cols=177 Identities=21% Similarity=0.288 Sum_probs=142.4
Q ss_pred CCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHH-HhhccCCCCCCceEecCchHHHHHHHHHHh
Q 028423 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSE-VKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 14 ~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~-l~~~~~~~~~~~~~~~GG~a~N~A~~la~r 92 (209)
++.+|+++| ++++|+++.++.+++++++...|...+++ +.......+ +.. ......+||+++|+|++|+ +
T Consensus 5 ~~~~v~viG-~~~~D~~~~~~~~~~~~~~~~~g~~~~~~-~~~~p~~~~~~~~------~~~~~~~GG~~~NvA~~la-~ 75 (345)
T 1bx4_A 5 RENILFGMG-NPLLDISAVVDKDFLDKYSLKPNDQILAE-DKHKELFDELVKK------FKVEYHAGGSTQNSIKVAQ-W 75 (345)
T ss_dssp CTTCEEEEC-CCEEEEEEECCHHHHHHTTCCSSEEEECC-GGGHHHHHHHHHH------SCCEEEEECHHHHHHHHHH-H
T ss_pred ccccEEEEC-CcceeEEEecCHHHHHHcCCCCCcEEEch-HHHHHHHHHHhcc------CCceecCCcHHHHHHHHHH-H
Confidence 456899999 99999999998877788887777766653 111111111 111 2788999999999999999 8
Q ss_pred cC----CCeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeeccccccCCCcc-ccc---
Q 028423 93 FG----VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQAD-ELI--- 164 (209)
Q Consensus 93 LG----~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~-~i~--- 164 (209)
|| .++.|+|.||+|.+|+++++.|++.||+++++...+.+|+.++++++ +|+|+++.+.+++..++++ +++
T Consensus 76 lgg~~~~~~~~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~~~~~~~~~~~~ 154 (345)
T 1bx4_A 76 MIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACIT-GDNRSLIANLAAANCYKKEKHLDLEK 154 (345)
T ss_dssp HHCSSTTCEEEEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEE-TTEEEEEEECGGGGGCCGGGTTTSHH
T ss_pred hcCCCCCcEEEEEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEc-CCceEeeeccchHhhcCcccccCcHH
Confidence 96 99999999999999999999999999999998754568999999987 7899998888887788887 775
Q ss_pred -hhhcCCccEEEEeCCcc-------HHHHHHHHhcCCeEEEecC
Q 028423 165 -AEDVKGSKVLHLALYLK-------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 165 -~~~i~~~d~v~i~g~~~-------~~~~~~ar~~g~~vsfd~~ 200 (209)
.+.++++|++|++|+.+ ...++.+|++|+++++|-.
T Consensus 155 ~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~ 198 (345)
T 1bx4_A 155 NWMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLS 198 (345)
T ss_dssp HHHHHHHCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHhhCCEEEEEEEeccCCHHHHHHHHHHHHHcCCEEEEeCC
Confidence 34577899999998753 2345677889999999963
No 13
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=99.91 E-value=1.2e-23 Score=180.07 Aligned_cols=160 Identities=19% Similarity=0.269 Sum_probs=131.4
Q ss_pred CCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHh
Q 028423 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~r 92 (209)
.++++|+++| ++++|+++.+ +++|.++. .... ......+||+++|+|++|+ |
T Consensus 15 ~~~~~i~viG-~~~iD~~~~~-----~~~p~~~~-~~~~--------------------~~~~~~~GG~~~NvA~~la-~ 66 (312)
T 2hlz_A 15 PRGSQILCVG-LVVLDVISLV-----DKYPKEDS-EIRC--------------------LSQRWQRGGNASNSCTILS-L 66 (312)
T ss_dssp --CCEEEEES-CCEEEEEEEE-----SSCCCTTC-EEEC--------------------SEEEEEEESHHHHHHHHHH-H
T ss_pred CCCCcEEEEC-cceEEEeecc-----ccCCCccc-eeec--------------------ccceeccCccHHHHHHHHH-H
Confidence 4567899999 9999999998 77775532 1111 2467889999999999999 8
Q ss_pred cCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEec-CCCCeeEEEEEc-CCCCeeEeeccccccCCCccccchhhcCC
Q 028423 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMK-RGPTGQCVCLVD-ASGNRTMRPCLSNAVKIQADELIAEDVKG 170 (209)
Q Consensus 93 LG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~-~~~T~~~~v~i~-~~GeR~~~~~~g~~~~l~~~~i~~~~i~~ 170 (209)
||.++.++|.||+|.+|+++++.|++.||+++++.+. +++|+.++++++ ++|+|+++.++++...+++++++...+++
T Consensus 67 LG~~v~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~~l~~ 146 (312)
T 2hlz_A 67 LGAPCAFMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKVDLTQ 146 (312)
T ss_dssp HTCCEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHTSCGGG
T ss_pred cCCceEEEEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhHhhhcc
Confidence 9999999999999999999999999999999999877 458898888776 57999999888877788887776566789
Q ss_pred ccEEEEeCCccHH---HHHHHHhc--------CCeEEEecC
Q 028423 171 SKVLHLALYLKKL---LFNLARDS--------LSSFSFYSI 200 (209)
Q Consensus 171 ~d~v~i~g~~~~~---~~~~ar~~--------g~~vsfd~~ 200 (209)
+|+||++++.++. .++.++++ +++++||..
T Consensus 147 ~~~v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~ 187 (312)
T 2hlz_A 147 FKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSVEVE 187 (312)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHTTSCGGGCCEEEEEEC
T ss_pred CCEEEEeccCHHHHHHHHHHHHHhcccccCCCCeEEEEEcc
Confidence 9999999987543 34566666 789999863
No 14
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.91 E-value=1.1e-23 Score=181.71 Aligned_cols=161 Identities=16% Similarity=0.220 Sum_probs=134.0
Q ss_pred CCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHh
Q 028423 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~r 92 (209)
++.++|+++| ++++|+++.+ +++|.++.. .. .......+||+++|+|++|+ |
T Consensus 22 ~~~~~vlviG-~~~iD~~~~~-----~~~p~~g~~-~~--------------------~~~~~~~~GG~~~NvA~~la-~ 73 (331)
T 2fv7_A 22 EEVAAVVVVG-SCMTDLVSLT-----SRLPKTGET-IH--------------------GHKFFIGFGGKGANQCVQAA-R 73 (331)
T ss_dssp --CCSEEEEC-CCEEEEEEEC-----SSCCCTTCC-CC--------------------CSEEEEEEECHHHHHHHHHH-H
T ss_pred cccCCEEEEC-cccEEEEEec-----CCCCCCCce-Ee--------------------cCceEECcCCHHHHHHHHHH-H
Confidence 3446899999 9999999998 778865321 11 12578899999999999999 8
Q ss_pred cCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEeeccccccCCCccccch--hhcC
Q 028423 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--EDVK 169 (209)
Q Consensus 93 LG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~--~~i~ 169 (209)
||.++.++|.||+|.+|+++++.|++.||+++++.+.+ .+|+.++++++++|+|+++.+++++..+++++++. +.++
T Consensus 74 LG~~~~~i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~l~ 153 (331)
T 2fv7_A 74 LGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAANVIS 153 (331)
T ss_dssp TTCCEEEEEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHHTHHHHH
T ss_pred CCCCeEEEEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecCCccccCCHHHHHHHHHhhc
Confidence 99999999999999999999999999999999998764 58999999999889999998888877788777653 3578
Q ss_pred CccEEEEeCCccH----HHHHHHHhcCCeEEEecCc
Q 028423 170 GSKVLHLALYLKK----LLFNLARDSLSSFSFYSII 201 (209)
Q Consensus 170 ~~d~v~i~g~~~~----~~~~~ar~~g~~vsfd~~~ 201 (209)
++|++|+++..+. ..++.+++.|++++||...
T Consensus 154 ~~~~v~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~ 189 (331)
T 2fv7_A 154 RAKVMVCQLEITPATSLEALTMARRSGVKTLFNPAP 189 (331)
T ss_dssp HCSEEEECSSSCHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred cCCEEEEecCCCHHHHHHHHHHHHHcCCEEEEeCCc
Confidence 8999999876543 3456778899999999754
No 15
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=99.91 E-value=9.4e-24 Score=179.61 Aligned_cols=153 Identities=16% Similarity=0.157 Sum_probs=129.6
Q ss_pred CeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcCC
Q 028423 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (209)
Q Consensus 16 ~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG~ 95 (209)
++|+++| ++++|+++.+ +++|.++... . .......+||+++|+|++|+ |||.
T Consensus 6 ~~i~viG-~~~iD~~~~~-----~~~p~~~~~~-~--------------------~~~~~~~~GG~~~N~A~~la-~LG~ 57 (302)
T 2c4e_A 6 EKITCVG-HTALDYIFNV-----EKFPEPNTSI-Q--------------------IPSARKYYGGAAANTAVGIK-KLGV 57 (302)
T ss_dssp EEEEEES-CCEEEEEEEC-----SSCCCTTCCC-C--------------------CSCEEEEEECHHHHHHHHHH-HTTC
T ss_pred CcEEEEC-ceeEEEEecc-----cccCCCCcee-e--------------------ecceeecCCCHHHHHHHHHH-HCCC
Confidence 3799999 9999999998 7787654321 1 12678899999999999999 8999
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCccceeEecCC-CCeeEEEEEcCCCCeeEeeccccccCCCccccchhhcCCccEE
Q 028423 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKVL 174 (209)
Q Consensus 96 ~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~-~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~~~i~~~d~v 174 (209)
++.++|.+|+|.+|+++++.|++.||+++++...++ +|+.++++++++|+|+++.++++...+++++++. +++|++
T Consensus 58 ~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~v 134 (302)
T 2c4e_A 58 NSELLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPN---FNTEIV 134 (302)
T ss_dssp EEEEECEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEECGGGGGGGGCCCCC---CCEEEE
T ss_pred ceEEEEEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeCChhhhCCHhhcCc---ccCCEE
Confidence 999999999999999999999999999998887654 7999999998899999998888777777777654 789999
Q ss_pred EEeCCccH---HHHHHHHhcCCeEEEecC
Q 028423 175 HLALYLKK---LLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 175 ~i~g~~~~---~~~~~ar~~g~~vsfd~~ 200 (209)
|+++..++ ..++.+|++| +++||..
T Consensus 135 ~~~~~~~~~~~~~~~~a~~~g-~v~~D~~ 162 (302)
T 2c4e_A 135 HIATGDPEFNLKCAKKAYGNN-LVSFDPG 162 (302)
T ss_dssp EECSSCHHHHHHHHHHHBTTB-EEEECCG
T ss_pred EEeCCCcHHHHHHHHHHHhcC-CEEEeCc
Confidence 99987653 3456678889 9999975
No 16
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.91 E-value=3.6e-23 Score=177.12 Aligned_cols=158 Identities=17% Similarity=0.220 Sum_probs=134.1
Q ss_pred CCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHh
Q 028423 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~r 92 (209)
.+-.+|+++| ++++|+++.+ +++|.++ ..... ......+||+++|+|++|+ |
T Consensus 12 ~~~~~v~vvG-~~~iD~~~~~-----~~~p~~g-~~~~~--------------------~~~~~~~GG~~~NvA~~la-~ 63 (311)
T 1vm7_A 12 HMFLVISVVG-SSNIDIVLKV-----DHFTKPG-ETQKA--------------------IEMNVFPGGKGANQAVTVA-K 63 (311)
T ss_dssp -CCCCEEEEC-CCEEEEEEEC-----SSCCCTT-CEEEC--------------------SEEEEEEECHHHHHHHHHH-H
T ss_pred cccCCEEEEC-cceeeEEEec-----ccCCCCC-ceEec--------------------CeeeecCCCHHHHHHHHHH-H
Confidence 3556899999 9999999999 7888763 32221 2678899999999999999 8
Q ss_pred cCCC-eEEEEEecCChhHHHHHHHHHhCCCccceeEec-CCCCeeEEEEEcCCCCeeEeeccccccCCCccccchhhcCC
Q 028423 93 FGVP-CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMK-RGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKG 170 (209)
Q Consensus 93 LG~~-~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~-~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~~~i~~ 170 (209)
||.+ +.++|.+|+|.+|+++++.|++.|| ++.+. +.+|+.++++++++|+|+++.++++...+++++++.+.+++
T Consensus 64 LG~~~~~~i~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~~ 140 (311)
T 1vm7_A 64 IGEKGCRFVTCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELIDWNTLSE 140 (311)
T ss_dssp HHSSCEEEEEEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCCHHHHTT
T ss_pred cCCCceEEEEEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEecCccccCCHHHhChhhccc
Confidence 9999 9999999999999999999999999 66664 45899999999988999999888887788888887677899
Q ss_pred ccEEEEeCCccH-HHHHHHHhcCCeEEEecCc
Q 028423 171 SKVLHLALYLKK-LLFNLARDSLSSFSFYSII 201 (209)
Q Consensus 171 ~d~v~i~g~~~~-~~~~~ar~~g~~vsfd~~~ 201 (209)
++++|+++..+. ...+.+|+.|++++||...
T Consensus 141 ~~~v~~~~~~~~~~~~~~a~~~~~~v~~Dp~~ 172 (311)
T 1vm7_A 141 SDILLLQNEIPFETTLECAKRFNGIVIFDPAP 172 (311)
T ss_dssp CSEEEECSSSCHHHHHHHHHHCCSEEEECCCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHcCCEEEEeCcc
Confidence 999999887653 4456689999999999754
No 17
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=99.90 E-value=1.9e-22 Score=177.15 Aligned_cols=178 Identities=21% Similarity=0.288 Sum_probs=138.7
Q ss_pred CCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHh
Q 028423 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~r 92 (209)
.++++|+++| ++++|+++.++..++++++...|...+++ ++...++.++. .......+||+++|+|++|+ |
T Consensus 30 ~~~~~vlviG-~~~lD~~~~~~~~~~~~~~~~~g~~~~~~-~~~~p~~~~~~------~~~~~~~~GG~~~NvA~~la-~ 100 (383)
T 2abs_A 30 TGPMRVFAIG-NPILDLVAEVPSSFLDEFFLKRGDATLAT-PEQMRIYSTLD------QFNPTSLPGGSALNSVRVVQ-K 100 (383)
T ss_dssp CCCCCEEEEC-CCEEEEEEECCHHHHHHTTCCTTCEEECC-GGGGGGGGTGG------GGCCEEEEESHHHHHHHHHH-H
T ss_pred CCCceEEEEC-cchheeEeccCHHHHHhcCCCCCceeech-hhHHHHHHhhc------cccceeeCCChHHHHHHHHH-H
Confidence 3456899999 99999999997666666655556554332 11111111110 12678899999999999999 8
Q ss_pred c---CCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeeccccccCCCccccchhhcC
Q 028423 93 F---GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVK 169 (209)
Q Consensus 93 L---G~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~~~i~ 169 (209)
| |.++.|+|.||+|.+|+++++.|++.||++.++...+.+|+.++++++ +|+|+++.+.++...+++++...+.++
T Consensus 101 Lg~~g~~v~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~l~~~~~~~~~l~ 179 (383)
T 2abs_A 101 LLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLIN-EKERTLCTHLGACGSFRLPEDWTTFAS 179 (383)
T ss_dssp HHCSTTSEEEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEE-TTEEEEEEECGGGGGCCCCTTHHHHTT
T ss_pred hccCCCcEEEEEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEc-CCceeEeeccChhhhCChhhhhHHHhh
Confidence 9 899999999999999999999999999999998754558999999997 799999888888777877655556789
Q ss_pred CccEEEEeCCcc-------HHHHHHHHh-cCCeEEEecC
Q 028423 170 GSKVLHLALYLK-------KLLFNLARD-SLSSFSFYSI 200 (209)
Q Consensus 170 ~~d~v~i~g~~~-------~~~~~~ar~-~g~~vsfd~~ 200 (209)
++|+||++|+.+ ...++.+|+ .|+++++|-.
T Consensus 180 ~~~~v~~~g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~ 218 (383)
T 2abs_A 180 GALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLS 218 (383)
T ss_dssp TCCEEEEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECC
T ss_pred cCCEEEEeeecccCCHHHHHHHHHHHHHhcCCEEEEeCC
Confidence 999999998763 234567788 8999999953
No 18
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=99.90 E-value=4.4e-23 Score=177.45 Aligned_cols=155 Identities=21% Similarity=0.249 Sum_probs=129.0
Q ss_pred CCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhc
Q 028423 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rL 93 (209)
++++|+++| ++++|++... +++|... .......+||+++|+|++|+ ||
T Consensus 20 ~~~~v~viG-~~~~D~~~~~-----~~~p~~~-------------------------~~~~~~~~GG~~~NvA~~la-~L 67 (327)
T 3hj6_A 20 GDLDVVSLG-EILVDMISTE-----EVNSLSQ-------------------------SREYTRHFGGSPANIAVNLS-RL 67 (327)
T ss_dssp --CCEEEES-CCEEEEECCC-----CCSSGGG-------------------------CCEEEEEEECHHHHHHHHHH-HT
T ss_pred CCCCEEEEc-cceEEEeccC-----CCCCccc-------------------------cceeeeecCcHHHHHHHHHH-Hc
Confidence 347899999 9999999988 5556321 12678899999999999999 89
Q ss_pred CCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEeeccccccCCCccccchhhcCCcc
Q 028423 94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSK 172 (209)
Q Consensus 94 G~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~~~i~~~d 172 (209)
|.++.++|.+|+|.+|+++++.|++.||+++++.+.+ .+|+.+++..+ +|+|+++.++++...++++++..+.++++|
T Consensus 68 G~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~-~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 146 (327)
T 3hj6_A 68 GKKVALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKS-TRTPDWLPYREADMYLQEDDIIFELIKRSK 146 (327)
T ss_dssp TCCEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCC-TTCCCEEEECSGGGGCCSCCCHHHHHC--C
T ss_pred CCcEEEEEEeCCCHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEec-CCCccEEEecChhhhCChhhcCHhHhccCC
Confidence 9999999999999999999999999999999998664 58888888765 799999988888888888888777899999
Q ss_pred EEEEeCCcc---------HHHHHHHHhcCCeEEEecCc
Q 028423 173 VLHLALYLK---------KLLFNLARDSLSSFSFYSII 201 (209)
Q Consensus 173 ~v~i~g~~~---------~~~~~~ar~~g~~vsfd~~~ 201 (209)
++|++++.+ ...++.+|+.|++|+||...
T Consensus 147 ~v~~~g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 184 (327)
T 3hj6_A 147 VFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCY 184 (327)
T ss_dssp EEEEESHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEEECchHhcCchhHHHHHHHHHHHHHCCCEEEEECCC
Confidence 999999743 13456788999999999853
No 19
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=99.89 E-value=6.9e-23 Score=176.09 Aligned_cols=154 Identities=21% Similarity=0.261 Sum_probs=124.7
Q ss_pred CCCeEEEecCceeEEEEeecCHHH---HhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHH
Q 028423 14 QAALILGLQPAALIDHVARVDWSL---LDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLS 90 (209)
Q Consensus 14 ~~~~Il~iG~~~~vD~i~~v~~~~---l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la 90 (209)
++++|+|+| .+++|++....... .+.+|. ......+||+++|+|++|+
T Consensus 4 ~~~~v~~iG-~~~~D~~~~~~~~~~~~~~~~p~----------------------------~~~~~~~GG~~~NvA~~la 54 (325)
T 3h49_A 4 DNLDVICIG-AAIVDIPLQPVSKNIFDVDSYPL----------------------------ERIAMTTGGDAINEATIIS 54 (325)
T ss_dssp -CEEEEEES-CCEEEEEECSCCGGGGGSSCCCC----------------------------SCCCCEEESHHHHHHHHHH
T ss_pred CCCeEEEEC-hhhheeeccCCCCccccccccch----------------------------heeEEccCcHHHHHHHHHH
Confidence 467899999 99999976542111 122331 2568899999999999999
Q ss_pred HhcCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEeeccc-cccCCCccccchhhc
Q 028423 91 VGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLS-NAVKIQADELIAEDV 168 (209)
Q Consensus 91 ~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~~~~g-~~~~l~~~~i~~~~i 168 (209)
|||.++.++|.||+|.+|+++++.|++.||+++++.+.+ .+|+.++++++++|+|+++.+++ +...+++++++.+.+
T Consensus 55 -~LG~~~~~ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 133 (325)
T 3h49_A 55 -RLGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARF 133 (325)
T ss_dssp -HTTCEEEEECEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCCGGGG
T ss_pred -HCCCCeEEEEEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccCcccccCChhhcChhhh
Confidence 899999999999999999999999999999999998765 58999999999999999998775 335678888887788
Q ss_pred CCccEEEEeCCcc---------HHHHHHHHhcCCeEEEe
Q 028423 169 KGSKVLHLALYLK---------KLLFNLARDSLSSFSFY 198 (209)
Q Consensus 169 ~~~d~v~i~g~~~---------~~~~~~ar~~g~~vsfd 198 (209)
++++++|++++.. ...++.||+++ +++||
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~-~~~~d 171 (325)
T 3h49_A 134 SQAKLLSLASIFNSPLLDGKALTEIFTQAKARQ-MIICA 171 (325)
T ss_dssp GGCSEEEEEEETTSTTSCHHHHHHHHHHHHHTT-CEEEE
T ss_pred ccCCEEEEecccCCcccCHHHHHHHHHHHHhcC-CEEEe
Confidence 9999999998641 23456778888 45555
No 20
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.89 E-value=2.2e-22 Score=173.96 Aligned_cols=155 Identities=20% Similarity=0.203 Sum_probs=126.7
Q ss_pred CCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHh
Q 028423 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~r 92 (209)
+++++|+++| .+++|++...+ |.... .......+||+++|+|++|+ |
T Consensus 24 ~~~~~vlviG-~~~iD~~~~~~-----------g~~~~--------------------~~~~~~~~GG~~~NvA~~la-~ 70 (336)
T 4du5_A 24 TSALDVITFG-EAMMLLVADRP-----------GPLEH--------------------AEAFHKRTAGAETNVAIGLA-R 70 (336)
T ss_dssp --CEEEEEEC-CCEEEEEESSS-----------SCGGG--------------------CCEEEEEEECHHHHHHHHHH-H
T ss_pred CCCCCEEEEC-hhhhhccCCCC-----------Cccch--------------------hhheeecCCCHHHHHHHHHH-h
Confidence 4567899999 99999987751 11101 13678999999999999999 8
Q ss_pred cCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEe-ec--cccccCCCccccchhhc
Q 028423 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMR-PC--LSNAVKIQADELIAEDV 168 (209)
Q Consensus 93 LG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~-~~--~g~~~~l~~~~i~~~~i 168 (209)
||.++.++|.+|+|.+|+++++.|++.||+++++.+.+ .+|+.+++.++++|+++++ ++ .++...+++++++.+.+
T Consensus 71 LG~~~~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~~~l 150 (336)
T 4du5_A 71 LGLKVGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWL 150 (336)
T ss_dssp TTCCEEEEEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCHHHH
T ss_pred CCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCHhHh
Confidence 99999999999999999999999999999999998875 4899999998888965433 33 36677889999888889
Q ss_pred CCccEEEEeCCcc----------HHHHHHHHhcCCeEEEecC
Q 028423 169 KGSKVLHLALYLK----------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 169 ~~~d~v~i~g~~~----------~~~~~~ar~~g~~vsfd~~ 200 (209)
+++|++|++|+.+ ...++.+|+.|++|+||..
T Consensus 151 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~ 192 (336)
T 4du5_A 151 LSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPN 192 (336)
T ss_dssp TTEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred ccCCEEEEcCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCc
Confidence 9999999999764 1345678899999999985
No 21
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.89 E-value=4.8e-22 Score=171.13 Aligned_cols=155 Identities=19% Similarity=0.253 Sum_probs=122.6
Q ss_pred CCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcC
Q 028423 15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (209)
Q Consensus 15 ~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG 94 (209)
.++|+++| .+++|++... |.+. .. . .. ......+||+++|+|++|+ |||
T Consensus 3 m~~i~viG-~~~~D~~~~~--------~~~~-~~-~-------------~~------~~~~~~~GG~~~NvA~~la-~LG 51 (330)
T 3iq0_A 3 LSKVFTIG-EILVEIMASK--------IGQP-FD-Q-------------PG------IWNGPYPSGAPAIFIDQVT-RLG 51 (330)
T ss_dssp -CEEEEES-CCEEEEEEEE--------ETCC-SS-S-------------CE------EEEEEEEECHHHHHHHHHH-HTT
T ss_pred CCCEEEEc-ceeEEEeccC--------CCCC-cc-c-------------cc------cccCcCCCCHHHHHHHHHH-HCC
Confidence 35899999 9999999874 1111 00 0 00 0246789999999999999 899
Q ss_pred CCeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEeec-c-ccccCCCccccchhhcCCc
Q 028423 95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPC-L-SNAVKIQADELIAEDVKGS 171 (209)
Q Consensus 95 ~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~~~-~-g~~~~l~~~~i~~~~i~~~ 171 (209)
.++.++|.+|+|.+|+++++.|++.||+++++.+.+ .+|+.++++++++|+|++.++ . ++...+++++++.+.++++
T Consensus 52 ~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 131 (330)
T 3iq0_A 52 VPCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDENILKDC 131 (330)
T ss_dssp CCEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCGGGGTTE
T ss_pred CcEEEEEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCHhHhccC
Confidence 999999999999999999999999999999998765 589999999998999955433 3 4566788888887889999
Q ss_pred cEEEEeCCcc---------HHHHHHHHhcCCeEEEecC
Q 028423 172 KVLHLALYLK---------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 172 d~v~i~g~~~---------~~~~~~ar~~g~~vsfd~~ 200 (209)
+++|++|+.+ ...++.+++.|++|+||..
T Consensus 132 ~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 169 (330)
T 3iq0_A 132 THFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPN 169 (330)
T ss_dssp EEEEEEGGGCSSHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEechhhcCcchHHHHHHHHHHHHHcCCEEEEcCC
Confidence 9999999864 2345677899999999974
No 22
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.89 E-value=1.7e-22 Score=173.88 Aligned_cols=158 Identities=16% Similarity=0.231 Sum_probs=131.0
Q ss_pred CCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHh
Q 028423 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~r 92 (209)
.++++|+++| .+++|+++.+ +.+|.++ .... ......+||+++|+|++|+ |
T Consensus 4 ~~~~~v~viG-~~~vD~~~~~-----~~~~~~g-~~~~---------------------~~~~~~~GG~~~NvA~~la-~ 54 (328)
T 3kzh_A 4 RKEPYLLVFG-ASVVDVFGFS-----KASYRPY-NSTP---------------------GHVKISFGGVCRNIAENMA-R 54 (328)
T ss_dssp CCCCCEEEEC-CCEEEEEEEE-----SSCCCTT-SEEE---------------------EEEEEEEECHHHHHHHHHH-H
T ss_pred CCCCcEEEEC-cEEeeeeecc-----CCCCCCC-CCce---------------------EEEEEccCcHHHHHHHHHH-H
Confidence 4667899999 9999999999 6777653 2222 1578899999999999999 8
Q ss_pred cCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecCC-CCeeEEEEEcCCCCeeEe-eccccccCCCccccc--hhhc
Q 028423 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMR-PCLSNAVKIQADELI--AEDV 168 (209)
Q Consensus 93 LG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~-~T~~~~v~i~~~GeR~~~-~~~g~~~~l~~~~i~--~~~i 168 (209)
||.++.++|.+|+|.+|+.+++.|++.||+++++...++ +|+.++++++++|+|++. .++++...++++.++ .+.+
T Consensus 55 LG~~v~~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (328)
T 3kzh_A 55 VGVNTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDSKREIF 134 (328)
T ss_dssp TTCCEEEECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHHTHHHH
T ss_pred cCCCcEEEEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHHHHHhh
Confidence 999999999999999999999999999999999887654 799999999999999885 456666677766654 3568
Q ss_pred CCccEEEEeCCccHH---HHHHHHhcCCeEEEecC
Q 028423 169 KGSKVLHLALYLKKL---LFNLARDSLSSFSFYSI 200 (209)
Q Consensus 169 ~~~d~v~i~g~~~~~---~~~~ar~~g~~vsfd~~ 200 (209)
+.++++++++..++. ..+ +++.|++|+||..
T Consensus 135 ~~~~~~~~~~~~~~~~~~l~~-a~~~~~~v~~D~~ 168 (328)
T 3kzh_A 135 ENAEYTVLDSDNPEIMEYLLK-NFKDKTNFILDPV 168 (328)
T ss_dssp HTCSEEEEESSCHHHHHHHHH-HHTTTSEEEEECC
T ss_pred ccCCEEEEeCCcHHHHHHHHH-HhhcCCcEEEEeC
Confidence 899999999987632 223 6789999999974
No 23
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=2.2e-22 Score=172.36 Aligned_cols=156 Identities=21% Similarity=0.228 Sum_probs=126.0
Q ss_pred CeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcCC
Q 028423 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (209)
Q Consensus 16 ~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG~ 95 (209)
++|+++| ++++|+++.+ ++.|.++.. .. ......+||+++|+|++|+ |||.
T Consensus 4 ~~i~viG-~~~~D~~~~~-----~~~~~~~~~-~~---------------------~~~~~~~GG~~~NvA~~la-~LG~ 54 (317)
T 2nwh_A 4 KKILVLG-GAHIDRRGMI-----ETETAPGAS-NP---------------------GSWMEEAGGGGFNAARNLS-RLGF 54 (317)
T ss_dssp CEEEEES-CCEEEEEEEE-----SSSCCTTSC-CC---------------------EEEEEEEECHHHHHHHHHH-HTTC
T ss_pred CeEEEEC-chheEEeecc-----CCCCCCCCC-ce---------------------EeEEEeCCcHHHHHHHHHH-hcCC
Confidence 4799999 9999999998 555654321 11 1467899999999999999 8999
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeecc-ccccCCCccccch----hhcCC
Q 028423 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL-SNAVKIQADELIA----EDVKG 170 (209)
Q Consensus 96 ~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~-g~~~~l~~~~i~~----~~i~~ 170 (209)
++.++|.+|+|.+|+++++.|++.|||++++...+.+|+.++++++++|+|+++.+. +.+..++++.++. +.++.
T Consensus 55 ~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (317)
T 2nwh_A 55 EVRIIAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAIIA 134 (317)
T ss_dssp EEEEECEEESSHHHHHHHHHHHHTTCEECCEEETTSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHH
T ss_pred CcEEEEeecCCchHHHHHHHHHHcCCCCCCcccCCCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhcc
Confidence 999999999999999999999999999999444345899999999989999877555 4455677665542 46788
Q ss_pred ccEEEEeCCccH----HHHHHHHhcCCeEEEecC
Q 028423 171 SKVLHLALYLKK----LLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 171 ~d~v~i~g~~~~----~~~~~ar~~g~~vsfd~~ 200 (209)
++++|+++.... ..++.+|+.|++|+||..
T Consensus 135 ~~~v~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~ 168 (317)
T 2nwh_A 135 SDFLLCDANLPEDTLTALGLIARACEKPLAAIAI 168 (317)
T ss_dssp CSEEEEETTSCHHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhcCCeEEEeCC
Confidence 999999876543 345677889999999974
No 24
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=99.89 E-value=5.9e-22 Score=168.87 Aligned_cols=153 Identities=19% Similarity=0.248 Sum_probs=126.4
Q ss_pred CeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcCC
Q 028423 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (209)
Q Consensus 16 ~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG~ 95 (209)
++|+++| ++++|++...+ +.. . . .......+||+++|+|++|+ |||.
T Consensus 2 ~~i~viG-~~~~D~~~~~~-----------~~~-~-------------~------~~~~~~~~GG~~~NvA~~la-~LG~ 48 (309)
T 1v1a_A 2 LEVVTAG-EPLVALVPQEP-----------GHL-R-------------G------KRLLEVYVGGAEVNVAVALA-RLGV 48 (309)
T ss_dssp CSEEEES-CCEEEEECSSS-----------SCG-G-------------G------CCEEEEEEECHHHHHHHHHH-HHTC
T ss_pred CcEEEEc-cceEEEecCCC-----------Ccc-c-------------c------hheeeeecCcHHHHHHHHHH-HcCC
Confidence 4799999 99999985321 110 0 0 12578899999999999999 8999
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeecc--ccccCCCccccchhhcCCccE
Q 028423 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDVKGSKV 173 (209)
Q Consensus 96 ~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~--g~~~~l~~~~i~~~~i~~~d~ 173 (209)
++.++|.+|+|.+|+++++.|++.||+++++.+.+++|+.+++.++++|+|++++++ ++...+++++++.+.++++|+
T Consensus 49 ~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 128 (309)
T 1v1a_A 49 KVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRF 128 (309)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHTCBCTTEEECSSCCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSE
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHcCCCCceEEEcCCCCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCChhHhcCCCE
Confidence 999999999999999999999999999999987644999999998888999887664 456678888887778899999
Q ss_pred EEEeCCccH----------HHHHHHHhcCCeEEEecCc
Q 028423 174 LHLALYLKK----------LLFNLARDSLSSFSFYSII 201 (209)
Q Consensus 174 v~i~g~~~~----------~~~~~ar~~g~~vsfd~~~ 201 (209)
+|++++.+. ..++.+++.|++++||...
T Consensus 129 v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 166 (309)
T 1v1a_A 129 LHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNY 166 (309)
T ss_dssp EEEETTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCC
T ss_pred EEEeCchhccCchHHHHHHHHHHHHHHcCCEEEEeCCC
Confidence 999998751 2356678899999999754
No 25
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.89 E-value=4.3e-22 Score=172.22 Aligned_cols=152 Identities=12% Similarity=0.036 Sum_probs=123.9
Q ss_pred CCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcC
Q 028423 15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (209)
Q Consensus 15 ~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG 94 (209)
.++|+++| .+++|++... | +.. . ........+||+++|+|++|+ |||
T Consensus 2 ~~~v~viG-~~~~D~~~~~--------~---~~~-~-------------------~~~~~~~~~GG~~~NvA~~la-~LG 48 (346)
T 3ktn_A 2 SLKIAAFG-EVMLRFTPPE--------Y---LML-E-------------------QTEQLRMNFVGTGVNLLANLA-HFQ 48 (346)
T ss_dssp CCEEEEEC-CCEEEEECST--------T---CCT-T-------------------TCSCCEEEEECHHHHHHHHHH-HTT
T ss_pred CCcEEEeC-hhhhhhcCCC--------C---Ccc-c-------------------ccceeEEeccCHHHHHHHHHH-HcC
Confidence 46899999 9999988532 1 110 0 013788999999999999999 899
Q ss_pred CCeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeec----cccccCCCccccc-hhhcC
Q 028423 95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPC----LSNAVKIQADELI-AEDVK 169 (209)
Q Consensus 95 ~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~----~g~~~~l~~~~i~-~~~i~ 169 (209)
.++.++|.||+|.+|+++++.|++.||+++++...+.+|+.+++.++++++++++.+ .++...+++++++ .+.++
T Consensus 49 ~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~ 128 (346)
T 3ktn_A 49 LETALITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLA 128 (346)
T ss_dssp CEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECCSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCHHHHHT
T ss_pred CCeEEEEecCCCHHHHHHHHHHHHcCCcceEEEeCCCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcChHHHhC
Confidence 999999999999999999999999999999998766689999998776566677766 2455678888887 56789
Q ss_pred CccEEEEeCCcc----------HHHHHHHHhcCCeEEEec
Q 028423 170 GSKVLHLALYLK----------KLLFNLARDSLSSFSFYS 199 (209)
Q Consensus 170 ~~d~v~i~g~~~----------~~~~~~ar~~g~~vsfd~ 199 (209)
++|++|++|+.+ ...++.+|+.|++|+||.
T Consensus 129 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~ 168 (346)
T 3ktn_A 129 EVDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDF 168 (346)
T ss_dssp TCSEEEECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeC
Confidence 999999999864 124567789999999997
No 26
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.89 E-value=1.4e-22 Score=173.65 Aligned_cols=147 Identities=18% Similarity=0.128 Sum_probs=117.8
Q ss_pred CCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhc
Q 028423 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rL 93 (209)
++++|+++| ++++|++... ......+||+++|+|++|+ ||
T Consensus 3 m~~~i~viG-~~~~D~~~~~--------------------------------------~~~~~~~GG~~~NvA~~la-~L 42 (319)
T 3lhx_A 3 LSKKIAVIG-ECMIELSEKG--------------------------------------ADVKRGFGGDTLNTSVYIA-RQ 42 (319)
T ss_dssp -CEEEEEES-CCEEEEEC-----------------------------------------CCEEEEECHHHHHHHHHH-TT
T ss_pred ccCceeeec-hhhhhhccCC--------------------------------------CceEEecCChHHHHHHHHH-Hc
Confidence 456899999 9999997543 0467889999999999999 89
Q ss_pred C----CCeEEEEEecCChhHHHHHHHHHhCCCccceeEecCC-CCeeEEEEEcCCCCeeEeeccccc---cCCCccccc-
Q 028423 94 G----VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNA---VKIQADELI- 164 (209)
Q Consensus 94 G----~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~-~T~~~~v~i~~~GeR~~~~~~g~~---~~l~~~~i~- 164 (209)
| .++.|+|.||+|.+|+++++.|++.|||++++.+.++ +|+.++++++++|+|+++.+++.. ..+++++++
T Consensus 43 G~~~~~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~ 122 (319)
T 3lhx_A 43 VDPAALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAA 122 (319)
T ss_dssp SCTTTEEEEEECEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHH
T ss_pred CCCCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhh
Confidence 9 9999999999999999999999999999999988754 899999999889999999887642 345555443
Q ss_pred -hhhcCCccEEEEeCCcc-----------HHHHHHHHhcCCeEEEecC
Q 028423 165 -AEDVKGSKVLHLALYLK-----------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 165 -~~~i~~~d~v~i~g~~~-----------~~~~~~ar~~g~~vsfd~~ 200 (209)
.+.++++|++|++|+.+ ...++.+|+.|++|+||..
T Consensus 123 ~~~~l~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~ 170 (319)
T 3lhx_A 123 ICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNN 170 (319)
T ss_dssp HHHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHhcCCCEEEEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCc
Confidence 25689999999998653 1345677899999999974
No 27
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=99.89 E-value=7.1e-22 Score=169.80 Aligned_cols=157 Identities=23% Similarity=0.263 Sum_probs=128.3
Q ss_pred CCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHh
Q 028423 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~r 92 (209)
.++++|+++| ++++|++... ...|... .......+||+++|+|++|+ |
T Consensus 9 ~~~~~i~viG-~~~~D~~~~~-----~~~~~~~-------------------------~~~~~~~~GG~~~NvA~~la-~ 56 (332)
T 2qcv_A 9 DREFDLIAIG-RACIDLNAVE-----YNRPMEE-------------------------TMTFSKYVGGSPANIVIGSS-K 56 (332)
T ss_dssp CCSEEEEEES-CCEEEEEESS-----CSSCGGG-------------------------CCCEEEEEESHHHHHHHHHH-H
T ss_pred ccCCcEEEEC-cceEEEecCC-----CCCCccc-------------------------cceeEecCCCHHHHHHHHHH-H
Confidence 3567899999 9999999876 3333110 12678999999999999999 8
Q ss_pred cCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecC--CCCeeEEEEEcCCCCeeEeecc--ccccCCCccccchhhc
Q 028423 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR--GPTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDV 168 (209)
Q Consensus 93 LG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~--~~T~~~~v~i~~~GeR~~~~~~--g~~~~l~~~~i~~~~i 168 (209)
||.++.|+|.||+|.+|+++++.|++.|||++++.+.+ .+|+.+++.++.+|+|.++.++ ++...+++++++...+
T Consensus 57 LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~ 136 (332)
T 2qcv_A 57 LGLKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYI 136 (332)
T ss_dssp TTCCEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHHHH
T ss_pred cCCceEEEEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHHHH
Confidence 99999999999999999999999999999999998763 3799999987767888776655 3455788888877778
Q ss_pred CCccEEEEeCCcc------H---HHHHHHHhcCCeEEEecCc
Q 028423 169 KGSKVLHLALYLK------K---LLFNLARDSLSSFSFYSII 201 (209)
Q Consensus 169 ~~~d~v~i~g~~~------~---~~~~~ar~~g~~vsfd~~~ 201 (209)
+++|++|++|+.+ + ..++.+|++|++++||...
T Consensus 137 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 178 (332)
T 2qcv_A 137 RRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDY 178 (332)
T ss_dssp TTEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred ccCCEEEEeCccccCchhHHHHHHHHHHHHHCCCEEEEcCcC
Confidence 9999999999853 1 2356778899999999753
No 28
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.88 E-value=2e-22 Score=174.08 Aligned_cols=169 Identities=14% Similarity=0.119 Sum_probs=131.9
Q ss_pred ceeeeecccCCCCeEEEecCceeEEEEeecCHHHH-----hhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEec
Q 028423 4 EHLIINREASQAALILGLQPAALIDHVARVDWSLL-----DQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIA 78 (209)
Q Consensus 4 ~~~~~~~~~~~~~~Il~iG~~~~vD~i~~v~~~~l-----~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~ 78 (209)
|.++++.. ++|+++| ++++|+++.+++.++ +++|.+.... . .......+
T Consensus 3 ~~~~~~~~----m~i~v~G-~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------------~~~~~~~~ 56 (334)
T 2pkf_A 3 EDLYFQSH----MTIAVTG-SIATDHLMRFPGRFSEQLLPEHLHKVSLSF-L--------------------VDDLVMHR 56 (334)
T ss_dssp CCSSSCCS----SEEEEES-CCEEEEEEECSSCTHHHHTTSCGGGCCCCC-C--------------------CSEEEEEE
T ss_pred ccccCccC----CeEEEEC-ChhheEEEecChHHhhhhchhhcccccccc-c--------------------cccceecC
Confidence 44444443 5899999 999999998743222 2334322110 0 12577899
Q ss_pred CchHHHHHHHHHHhcCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEeeccccccC
Q 028423 79 GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLSNAVK 157 (209)
Q Consensus 79 GG~a~N~A~~la~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~~~~g~~~~ 157 (209)
||+++|+|++|+ |||.++.++|.+|+| +|+ +++.|++.||+++++.+.+ .+|+.++++++++|+|++..++++...
T Consensus 57 GG~~~NvA~~la-~LG~~~~~i~~vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~ 133 (334)
T 2pkf_A 57 GGVAGNMAFAIG-VLGGEVALVGAAGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSE 133 (334)
T ss_dssp ECHHHHHHHHHH-HTTCEEEEECEECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGG
T ss_pred CChHHHHHHHHH-HcCCCeEEEEEEeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhh
Confidence 999999999999 899999999999999 999 9999999999999998764 589999999998899998877877666
Q ss_pred CCccccchh--hcCCccEEEEeCCccHH---HHHHHHhcCCeEEEecCc
Q 028423 158 IQADELIAE--DVKGSKVLHLALYLKKL---LFNLARDSLSSFSFYSII 201 (209)
Q Consensus 158 l~~~~i~~~--~i~~~d~v~i~g~~~~~---~~~~ar~~g~~vsfd~~~ 201 (209)
+++++++.. .++++|++|++++..+. .++.+|++|++++||...
T Consensus 134 ~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 182 (334)
T 2pkf_A 134 ARNIKLADVVSAIGKPELVIIGANDPEAMFLHTEECRKLGLAFAADPSQ 182 (334)
T ss_dssp GGGCCHHHHHHHHCSCSEEEEESCCHHHHHHHHHHHHHHTCCEEEECGG
T ss_pred CCHhhcChhhhhhcCCCEEEEcCCChHHHHHHHHHHHhcCCeEEEeccc
Confidence 766666543 35899999999987643 456678899999999743
No 29
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=99.88 E-value=2.4e-22 Score=171.87 Aligned_cols=154 Identities=14% Similarity=0.174 Sum_probs=125.8
Q ss_pred CCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHh
Q 028423 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~r 92 (209)
.++++|+++| ++++|++... +..|.+. ...+...+||+++|+|++|+ |
T Consensus 6 ~~~~~v~~iG-~~~~D~~~~~-----~~~p~~~-------------------------~~~~~~~~GG~~~NvA~~la-~ 53 (319)
T 3pl2_A 6 TSTHEVLAIG-RLGVDIYPLQ-----SGVGLAD-------------------------VQSFGKYLGGSAANVSVAAA-R 53 (319)
T ss_dssp -CCCSEEEES-CCEEEECBSS-----SSCCGGG-------------------------CCCBCCEEECHHHHHHHHHH-H
T ss_pred ccCCCEEEEC-hhheeeeccc-----CCCCccc-------------------------cceeeecCCCcHHHHHHHHH-H
Confidence 4567899999 9999998876 4555321 12678999999999999999 8
Q ss_pred cCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEeecc--cc-ccCCCccccchhhc
Q 028423 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCL--SN-AVKIQADELIAEDV 168 (209)
Q Consensus 93 LG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~~~~--g~-~~~l~~~~i~~~~i 168 (209)
||.++.++|.+|+|.+|+++++.|++.||+++++.+.+ .+|+.+++.++++|+|+++.++ ++ ...+++++++.+.+
T Consensus 54 LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~ 133 (319)
T 3pl2_A 54 HGHNSALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSLDDV 133 (319)
T ss_dssp TTCCEEEEEEEESSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCHHHH
T ss_pred CCCceEEEEEeCCCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCHHHh
Confidence 99999999999999999999999999999999998764 5899999988888999888774 34 45788888888889
Q ss_pred CCccEEEEeCCccH---------HHHHHHHhcCCeEEEec
Q 028423 169 KGSKVLHLALYLKK---------LLFNLARDSLSSFSFYS 199 (209)
Q Consensus 169 ~~~d~v~i~g~~~~---------~~~~~ar~~g~~vsfd~ 199 (209)
+++|++|++|+.+. ..++.+++ +.+++||.
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~v~~D~ 172 (319)
T 3pl2_A 134 READILWFTLTGFSEEPSRGTHREILTTRAN-RRHTIFDL 172 (319)
T ss_dssp HHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-CSCEEEEC
T ss_pred ccCCEEEEecccccCchhHHHHHHHHHHHHH-CCcEEEeC
Confidence 99999999987631 12233444 67889996
No 30
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.88 E-value=4.6e-22 Score=170.08 Aligned_cols=154 Identities=16% Similarity=0.163 Sum_probs=122.4
Q ss_pred eecccCCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHH
Q 028423 8 INREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIR 87 (209)
Q Consensus 8 ~~~~~~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~ 87 (209)
-|-+..++++|+++| ++++|+++.+ +++| + |....+ ......+||+++|+|+
T Consensus 13 ~~~~~~~~~~v~viG-~~~iD~~~~~-----~~~p-~-g~~~~~--------------------~~~~~~~GG~~~NvA~ 64 (306)
T 3bf5_A 13 ENLYFQGMRFLAYFG-HLNIDVLISV-----DSIP-R-EGSVNV--------------------KDLRPRFGGTAGNFAI 64 (306)
T ss_dssp ------CCEEEEEEC-CCEEEEEEEC-----SCCC-S-SEEEEC--------------------SEEEEEEEHHHHHHHH
T ss_pred cceeccCCCcEEEEC-CceEEEEEec-----CCCC-C-CceEEC--------------------cceEecCCChHHHHHH
Confidence 355567888999999 9999999998 7777 3 333221 2578899999999999
Q ss_pred HHHHhcCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEeeccccccCCCccccchh
Q 028423 88 GLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAE 166 (209)
Q Consensus 88 ~la~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~~ 166 (209)
+|+ |||.++.++|.+|+| +|+++++.|++.||+++++.+.+ .+|+.+++++++ |+|+++.++++...++ ++++
T Consensus 65 ~la-~LG~~~~~i~~vG~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~~ga~~~~~-~~l~-- 138 (306)
T 3bf5_A 65 VAQ-KFRIPFDLYSAVGMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDG-KKQVSFMHQGAMAAWA-PQLA-- 138 (306)
T ss_dssp HHH-HTTCCCEEEEEEETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECS-SCEEEEEECTHHHHCC-CCCC--
T ss_pred HHH-HcCCCeEEEEEEeCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcC-CeeEEEEeCChhhhhh-Hhhc--
Confidence 999 899999999999999 99999999999999999987654 479999999987 9999998888766666 5443
Q ss_pred hcCCccEEEEeCCc-cHHHHHHHHhcCCeEEEecC
Q 028423 167 DVKGSKVLHLALYL-KKLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 167 ~i~~~d~v~i~g~~-~~~~~~~ar~~g~~vsfd~~ 200 (209)
+++|++|++++. ....++.||+ +|+||..
T Consensus 139 --~~~~~v~~~~~~~~~~~~~~a~~---~v~~D~~ 168 (306)
T 3bf5_A 139 --DEYEYVHFSTGPNYLDMAKSIRS---KIIFDPS 168 (306)
T ss_dssp --SCEEEEEECSSSSHHHHHHHCCS---EEEECCG
T ss_pred --CCCCEEEECChHHHHHHHHHhCC---cEEEcCc
Confidence 789999999876 2333344443 9999975
No 31
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=99.88 E-value=5.6e-22 Score=170.84 Aligned_cols=158 Identities=15% Similarity=0.101 Sum_probs=126.1
Q ss_pred eEEEecCceeEEEEeecCHHHH-----hhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHH
Q 028423 17 LILGLQPAALIDHVARVDWSLL-----DQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSV 91 (209)
Q Consensus 17 ~Il~iG~~~~vD~i~~v~~~~l-----~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~ 91 (209)
+|+++| ++++|+++.++..++ +++|.+. ....+ ......+||+++|+|++|+
T Consensus 2 ~i~v~G-~~~iD~~~~~~~~~~~~~~~~~~p~~~-~~~~~--------------------~~~~~~~GG~~~NvA~~la- 58 (326)
T 3b1n_A 2 ATLICG-SIAYDNIMTFEGRFREHILPDQVHLIN-LSFLV--------------------PTMRREFGGCAGNIAYALN- 58 (326)
T ss_dssp CEEEES-CCEEEEEEECSSCGGGGCCTTSSSSCE-EEEEC--------------------CSCCCEEECHHHHHHHHHH-
T ss_pred cEEEEC-cceEEEEEecchhhhhhccccccCCCC-cceec--------------------ccceeccCCHHHHHHHHHH-
Confidence 699999 999999999843333 3344332 11110 2567789999999999999
Q ss_pred hcCCCeEEEEEecC-ChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEeeccccccCCCccccchhhcC
Q 028423 92 GFGVPCGLIGAYGD-DQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVK 169 (209)
Q Consensus 92 rLG~~~~lig~VG~-D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~~~i~ 169 (209)
|||.++.++|.+|+ | +|+ +++.|++.|||++++.+.+ .+|+.++++++++|+|++..++++...+.+++++.. +
T Consensus 59 ~LG~~~~~i~~vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~~~--~ 134 (326)
T 3b1n_A 59 LLGGDARMMGTLGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGEA--K 134 (326)
T ss_dssp HTTCCEEEEEEEETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGGGC--C
T ss_pred HcCCCeeEEEEECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhhcChhhcccc--c
Confidence 89999999999999 9 899 9999999999999998764 589999999998899988777777666666665433 7
Q ss_pred CccEEEEeCCccH---HHHHHHHhcCCeEEEecCc
Q 028423 170 GSKVLHLALYLKK---LLFNLARDSLSSFSFYSII 201 (209)
Q Consensus 170 ~~d~v~i~g~~~~---~~~~~ar~~g~~vsfd~~~ 201 (209)
++|++|++++..+ ..++.+|+.|++|+||...
T Consensus 135 ~~~~v~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 169 (326)
T 3b1n_A 135 DIKLAIVGPDGFQGMVQHTEELAQAGVPFIFDPGQ 169 (326)
T ss_dssp SCSEEEECSCCHHHHHHHHHHHHHHTCCEEECCGG
T ss_pred CCCEEEECCccHHHHHHHHHHHHHCCCEEEEeCch
Confidence 8999999988754 3456778899999999743
No 32
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.87 E-value=1.2e-21 Score=167.38 Aligned_cols=150 Identities=17% Similarity=0.253 Sum_probs=123.9
Q ss_pred CeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcCC
Q 028423 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (209)
Q Consensus 16 ~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG~ 95 (209)
++|+++| ++++|++...+ |.... .......+||+++|+|++|+ |||.
T Consensus 2 ~~v~viG-~~~iD~~~~~~-----------g~~~~--------------------~~~~~~~~GG~~~NvA~~la-~LG~ 48 (313)
T 3ewm_A 2 SLIASIG-ELLIDLISVEE-----------GDLKD--------------------VRLFEKHPGGAPANVAVGVS-RLGV 48 (313)
T ss_dssp CEEEEES-CCEEEEEESSS-----------SCTTT--------------------CCEEEEEEECHHHHHHHHHH-HTTC
T ss_pred CcEEEEC-ceeeeeecCCC-----------CCccc--------------------ccceeecCCCHHHHHHHHHH-HCCC
Confidence 5799999 99999987651 11000 12678999999999999999 8999
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEeeccc-cccCCCccccchhhcCCccE
Q 028423 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLS-NAVKIQADELIAEDVKGSKV 173 (209)
Q Consensus 96 ~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~~~~g-~~~~l~~~~i~~~~i~~~d~ 173 (209)
++.++|.+|+|.+|+++++.|++.||+++++.+.+ .+|+.+++.+++ |+|+++.+.+ +...+++++++.+.++++++
T Consensus 49 ~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~-g~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~ 127 (313)
T 3ewm_A 49 KSSLISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKG-ASPSFLLYDDVAYFNMTLNDINWDIVEEAKI 127 (313)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSS-SSCEEEECCSSGGGCCCGGGCCHHHHHHCSE
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEecC-CCcceEeeccCHHHhCChhhCCHHHhCCCCE
Confidence 99999999999999999999999999999998664 589999998875 9999998876 44678888888788889999
Q ss_pred EEEeCCccH---------HHHHHHHhcCCeEEEecC
Q 028423 174 LHLALYLKK---------LLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 174 v~i~g~~~~---------~~~~~ar~~g~~vsfd~~ 200 (209)
+|++++.+. ..++.+| .+++|+||..
T Consensus 128 ~~~~g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~ 162 (313)
T 3ewm_A 128 VNFGSVILARNPSRETVMKVIKKIK-GSSLIAFDVN 162 (313)
T ss_dssp EEEESGGGGSTTHHHHHHHHHHHHB-TTBEEEEECC
T ss_pred EEEcCcccCCcchHHHHHHHHHHhc-cCCEEEEeCC
Confidence 999998631 2345556 4789999984
No 33
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.87 E-value=9e-22 Score=169.67 Aligned_cols=149 Identities=17% Similarity=0.173 Sum_probs=123.5
Q ss_pred CCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHh
Q 028423 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~r 92 (209)
++.++|+++| .+++|++... .+ ..+...+||+++|+|++|+ |
T Consensus 21 ~~m~~i~viG-~~~iD~~~~~---------~~---------------------------~~~~~~~GG~~~NvA~~la-~ 62 (328)
T 4e69_A 21 QSMMHILSIG-ECMAELAPAD---------LP---------------------------GTYRLGFAGDTFNTAWYLA-R 62 (328)
T ss_dssp BSSCEEEEES-CCEEEEEECS---------ST---------------------------TEEEEEEECHHHHHHHHHH-H
T ss_pred ccCCcEEEec-CcEEEEecCC---------CC---------------------------CceEEecCCHHHHHHHHHH-h
Confidence 3457899999 9999998862 01 1578899999999999999 8
Q ss_pred c--CCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecCC-CCeeEEEEEcCCCCeeEeecccccc---CCCccccchh
Q 028423 93 F--GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG-PTGQCVCLVDASGNRTMRPCLSNAV---KIQADELIAE 166 (209)
Q Consensus 93 L--G~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~-~T~~~~v~i~~~GeR~~~~~~g~~~---~l~~~~i~~~ 166 (209)
| |.++.++|.||+|.+|+++++.|++.||+++++.+.++ +|+.++++++ +|+|+++++++... .++..++..+
T Consensus 63 Lg~G~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~ 141 (328)
T 4e69_A 63 LRPESRISYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALAA 141 (328)
T ss_dssp HCTTSEEEEECEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHHHHH
T ss_pred cCCCCcEEEEEeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccccchH
Confidence 9 89999999999999999999999999999999988755 8999999999 99999998876532 2344444457
Q ss_pred hcCCccEEEEeCCcc-----------HHHHHHHHhcCCeEEEecC
Q 028423 167 DVKGSKVLHLALYLK-----------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 167 ~i~~~d~v~i~g~~~-----------~~~~~~ar~~g~~vsfd~~ 200 (209)
.++++|++|++++.+ ...++.+|+.|++|+||..
T Consensus 142 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~ 186 (328)
T 4e69_A 142 AMARADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPN 186 (328)
T ss_dssp HHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HhcCCCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 789999999998742 1345677899999999983
No 34
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.87 E-value=3.9e-21 Score=164.50 Aligned_cols=151 Identities=16% Similarity=0.147 Sum_probs=122.9
Q ss_pred EEEecCceeEEE-EeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcCCC
Q 028423 18 ILGLQPAALIDH-VARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP 96 (209)
Q Consensus 18 Il~iG~~~~vD~-i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG~~ 96 (209)
|+++.+|+++|+ ++.+ +++ . .|....+ ......+||+++|+|++|+ |||.+
T Consensus 4 i~tvt~np~iD~~~~~v-----~~~-~-~g~~~~~--------------------~~~~~~~GG~~~NvA~~la-~LG~~ 55 (320)
T 3ie7_A 4 IYTITLNPAIDRLLFIR-----GEL-E-KRKTNRV--------------------IKTEFDCGGKGLHVSGVLS-KFGIK 55 (320)
T ss_dssp EEEEESSCEEEEEEEES-----SSC-C-TTSCCCC--------------------SEEEEEEESHHHHHHHHHH-HHTCC
T ss_pred EEEEecchHHeeeEEEc-----CCc-c-CCCeeEe--------------------ceeeecCCchHHHHHHHHH-HcCCC
Confidence 445545999999 9999 666 3 3443321 3688999999999999999 89999
Q ss_pred eEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCC--eeEeeccccccCCCccccch------hhc
Q 028423 97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGN--RTMRPCLSNAVKIQADELIA------EDV 168 (209)
Q Consensus 97 ~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~Ge--R~~~~~~g~~~~l~~~~i~~------~~i 168 (209)
+.++|.+|+| +|+++++.|++.||+++++...+++|+.++++++ +|+ |+++..++. .+++++++. +.+
T Consensus 56 ~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~-~g~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~ 131 (320)
T 3ie7_A 56 NEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGTSTRECFVVLS-DDTNGSTMIPEAGF--TVSQTNKDNLLKQIAKKV 131 (320)
T ss_dssp EEEEEEEEST-THHHHHHHHHHTTCCBCCEEETTCCCEEEEEEEE-TTCSCCEEEECCCC--CCCHHHHHHHHHHHHHHC
T ss_pred eEEEEEecCc-hHHHHHHHHHHcCCceEEEEecCCCCceEEEEEE-CCCceeEEEeCCCC--CCCHHHHHHHHHHHHHHh
Confidence 9999999998 9999999999999999999555568999999998 888 988877664 566665542 568
Q ss_pred CCccEEEEeCCcc--------HHHHHHHHhcCCeEEEecC
Q 028423 169 KGSKVLHLALYLK--------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 169 ~~~d~v~i~g~~~--------~~~~~~ar~~g~~vsfd~~ 200 (209)
+++|++|++|+.+ ...++.+|+.|++++||..
T Consensus 132 ~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 171 (320)
T 3ie7_A 132 KKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNS 171 (320)
T ss_dssp CTTCEEEEESCCCTTCCHHHHHHHHHHHHHHTCEEEEECC
T ss_pred cCCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 8999999999864 2345678899999999974
No 35
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.87 E-value=3e-21 Score=166.34 Aligned_cols=157 Identities=13% Similarity=0.131 Sum_probs=125.0
Q ss_pred CCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhc
Q 028423 14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF 93 (209)
Q Consensus 14 ~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rL 93 (209)
..+.++++| ++++|+++.+ ++ |.+ |+...++ ++......+||+++|+|++|+ ||
T Consensus 11 ~~~~~~v~G-~~~vD~~~~~-----~~-~~~-g~~~~~s-----------------~~~~~~~~~GG~~~NvA~~la-~L 64 (331)
T 2ajr_A 11 HHMVLTVTL-NPALDREIFI-----ED-FQV-NRLYRIN-----------------DLSKTQMSPGGKGINVSIALS-KL 64 (331)
T ss_dssp -CCEEEEES-SCEEEEEEEC-----TT-CCS-SCEEECC-----------------SGGGEEEEEESHHHHHHHHHH-HT
T ss_pred cceEEEEec-chHHeEEEEc-----CC-ccC-CceEEec-----------------cccceEEecCcHHHHHHHHHH-Hc
Confidence 357799999 9999999999 55 544 4433320 012688999999999999999 89
Q ss_pred CCCeEEEEEecCChhHHHHHHHHHhCC--CccceeEecCCCCeeEEEEEcCCCCe-eEeeccccccCCCccccch-----
Q 028423 94 GVPCGLIGAYGDDQQGQLFVSNMQFSG--VDVSRLRMKRGPTGQCVCLVDASGNR-TMRPCLSNAVKIQADELIA----- 165 (209)
Q Consensus 94 G~~~~lig~VG~D~~G~~i~~~L~~~G--Vd~~~v~~~~~~T~~~~v~i~~~GeR-~~~~~~g~~~~l~~~~i~~----- 165 (209)
|.++.++|.+|+| +|+++++.|++.| |+++++...+ +|++++++++++|+| +++..+++ .+++++++.
T Consensus 65 G~~~~~~~~vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~-~t~~~~~~v~~~g~~~~~~~~~g~--~l~~~~~~~~~~~~ 140 (331)
T 2ajr_A 65 GVPSVATGFVGGY-MGKILVEELRKISKLITTNFVYVEG-ETRENIEIIDEKNKTITAINFPGP--DVTDMDVNHFLRRY 140 (331)
T ss_dssp TCCEEEEEEEEHH-HHHHHHHHHHHHCTTEEEEEEEESS-CCEEEEEEEETTTTEEEEEECCCC--CCCHHHHHHHHHHH
T ss_pred CCCeEEEEEecCc-hHHHHHHHHHHcCCccceEEEEcCC-CCeEEEEEEeCCCceEEEEeCCCC--CCCHHHHHHHHHHH
Confidence 9999999999998 9999999999999 9999988754 588998888888999 77666665 466655432
Q ss_pred -hhcCCccEEEEeCCcc--------HHHHHHHHhcCCeEEEecC
Q 028423 166 -EDVKGSKVLHLALYLK--------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 166 -~~i~~~d~v~i~g~~~--------~~~~~~ar~~g~~vsfd~~ 200 (209)
+.++++|++|++|+.+ ...++.||++|++|+||..
T Consensus 141 ~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 184 (331)
T 2ajr_A 141 KMTLSKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQT 184 (331)
T ss_dssp HHHHTTCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECC
T ss_pred HHhcccCCEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECC
Confidence 3578999999998764 2346778999999999964
No 36
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=99.86 E-value=1.9e-21 Score=168.49 Aligned_cols=154 Identities=17% Similarity=0.142 Sum_probs=116.3
Q ss_pred CCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHh
Q 028423 13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG 92 (209)
Q Consensus 13 ~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~r 92 (209)
++..+|+++| .+++|+.... ..|... ...+...+||+++|+|++|+ |
T Consensus 22 ~mm~kv~~~G-E~m~~l~p~~------~~~~~~-------------------------~~~~~~~~GG~~aNvA~~la-r 68 (351)
T 4gm6_A 22 SMMKQVVTIG-ELLMRLSTQQ------GIPFSQ-------------------------TTALDIHIGGAEANVAVNLS-K 68 (351)
T ss_dssp ---CEEEEEC-CCEEEEECCT------TCCGGG-------------------------CSEEEEEEECHHHHHHHHHH-H
T ss_pred hccCCEEEEc-ceeEEecCCC------CCCccc-------------------------cCeEEEecCChHHHHHHHHH-H
Confidence 5667999999 9999976433 112100 12678999999999999999 8
Q ss_pred cCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEE-EcCCCCeeEeecccc--ccCCCccccc-hhhc
Q 028423 93 FGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCL-VDASGNRTMRPCLSN--AVKIQADELI-AEDV 168 (209)
Q Consensus 93 LG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~-i~~~GeR~~~~~~g~--~~~l~~~~i~-~~~i 168 (209)
||.++.|+|+||+|.+|+++++.|++.|||++++...+.+++.+++. .+..+++.+++++.. ...+.+.+++ .+.+
T Consensus 69 LG~~~~~ig~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~ 148 (351)
T 4gm6_A 69 LGHPTRIATVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWDLSELL 148 (351)
T ss_dssp TTCCEEEEEEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCCHHHHH
T ss_pred cCCCeEEEEEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccCHHHHH
Confidence 99999999999999999999999999999999998876654444444 345667777766532 2344555554 4578
Q ss_pred CCccEEEEeCCcc----------HHHHHHHHhcCCeEEEec
Q 028423 169 KGSKVLHLALYLK----------KLLFNLARDSLSSFSFYS 199 (209)
Q Consensus 169 ~~~d~v~i~g~~~----------~~~~~~ar~~g~~vsfd~ 199 (209)
++++++|++|+.+ ...++.||++|++|+||.
T Consensus 149 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~ 189 (351)
T 4gm6_A 149 KGIRVLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDM 189 (351)
T ss_dssp TTEEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhcccceecccchhhchhHHHHHHHHHHHHHHcCCCcccCC
Confidence 9999999998753 124577899999999996
No 37
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=99.86 E-value=4e-21 Score=166.28 Aligned_cols=145 Identities=19% Similarity=0.219 Sum_probs=114.4
Q ss_pred CeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcCC
Q 028423 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (209)
Q Consensus 16 ~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG~ 95 (209)
.+|+++| ++++|++... + ......+||+++|+|++|+ |||.
T Consensus 25 ~~ilviG-~~~~D~~~~~--------~-----------------------------~~~~~~~GG~~~NvA~~la-~LG~ 65 (339)
T 1tyy_A 25 NKVWVIG-DASVDLVPEK--------Q-----------------------------NSYLKCPGGASANVGVCVA-RLGG 65 (339)
T ss_dssp CCEEEES-CCEEEEEECS--------S-----------------------------SEEEEEEECHHHHHHHHHH-HTTC
T ss_pred CCEEEEC-cceeEEeccC--------C-----------------------------CceEEcCCCHHHHHHHHHH-HcCC
Confidence 4799999 9999998764 1 1467889999999999999 8999
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEeecc--ccccCCCccccchhhcCCcc
Q 028423 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCL--SNAVKIQADELIAEDVKGSK 172 (209)
Q Consensus 96 ~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~~~~--g~~~~l~~~~i~~~~i~~~d 172 (209)
++.++|.+|+|.+|+++++.|++.|||++++.+.+ .+|+.+++.++++|+|++.++. ++...++++ ..+.++++|
T Consensus 66 ~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~--~~~~l~~~~ 143 (339)
T 1tyy_A 66 ECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQ--DLPPFRQYE 143 (339)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGG--GCCCCCTTC
T ss_pred CeEEEEeeCCCHHHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcc--hhhHhccCC
Confidence 99999999999999999999999999999998864 5899999988888999887655 555556554 335678999
Q ss_pred EEEEeCCcc---------HHHHHHHHhcCCeEEEecCc
Q 028423 173 VLHLALYLK---------KLLFNLARDSLSSFSFYSII 201 (209)
Q Consensus 173 ~v~i~g~~~---------~~~~~~ar~~g~~vsfd~~~ 201 (209)
+||++++.+ ...++.+|+.|++|+||...
T Consensus 144 ~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~ 181 (339)
T 1tyy_A 144 WFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNL 181 (339)
T ss_dssp EEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCC
Confidence 999988632 12456778999999999753
No 38
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.86 E-value=9.8e-21 Score=161.14 Aligned_cols=153 Identities=22% Similarity=0.178 Sum_probs=121.2
Q ss_pred CeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcCC
Q 028423 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (209)
Q Consensus 16 ~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG~ 95 (209)
+.|+++++|+++|+++.+ +++ . .|..... ......+||+++|+|++|+ |||.
T Consensus 2 ~~i~~v~~n~~~D~~~~v-----~~~-~-~g~~~~~--------------------~~~~~~~GG~~~NvA~~la-~LG~ 53 (309)
T 3umo_A 2 VRIYTLTLAPSLDSATIT-----PQI-Y-PEGKLRC--------------------TAPVFEPGGGGINVARAIA-HLGG 53 (309)
T ss_dssp CCEEEECSSCEEEEEEEE-----SCC-C-SSSEEEC--------------------CCCEEEEESHHHHHHHHHH-HTTC
T ss_pred CcEEEEecchhheEEEEc-----Ccc-c-CCCeEEe--------------------ceeeecCCchHHHHHHHHH-HcCC
Confidence 347777669999999999 676 3 3444332 3789999999999999999 8999
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEc-CCCCeeEeeccccccCCCccccch--h---hcC
Q 028423 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVD-ASGNRTMRPCLSNAVKIQADELIA--E---DVK 169 (209)
Q Consensus 96 ~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~-~~GeR~~~~~~g~~~~l~~~~i~~--~---~i~ 169 (209)
++.++|.+|+| +|+++++.|++.||+++++... ++|+.++++++ ++|+|+++.++++ .+++++++. + .++
T Consensus 54 ~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~-~~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~ 129 (309)
T 3umo_A 54 SATAIFPAGGA-TGEHLVSLLADENVPVATVEAK-DWTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIE 129 (309)
T ss_dssp CEEEEEEECHH-HHHHHHHHHHHTTCCEEEEECS-SCCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHTTSC
T ss_pred CeEEEEEecCc-hHHHHHHHHHHcCCceEEEEec-CCCeeEEEEEECCCCcEEEEEcCCC--CCCHHHHHHHHHHHHhcC
Confidence 99999999999 9999999999999999998765 45666665554 4899999988876 366665531 1 146
Q ss_pred CccEEEEeCCcc--------HHHHHHHHhcCCeEEEecC
Q 028423 170 GSKVLHLALYLK--------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 170 ~~d~v~i~g~~~--------~~~~~~ar~~g~~vsfd~~ 200 (209)
.++++|++|+.+ ...++.+|+.|++++||..
T Consensus 130 ~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~ 168 (309)
T 3umo_A 130 SGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSS 168 (309)
T ss_dssp TTCEEEEESCCCTTCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEccCCCCCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 789999999763 2355778999999999974
No 39
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=99.86 E-value=9.3e-21 Score=161.42 Aligned_cols=151 Identities=23% Similarity=0.234 Sum_probs=122.0
Q ss_pred CeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcCC
Q 028423 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (209)
Q Consensus 16 ~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG~ 95 (209)
++|+++| ++++|++...+ |.... .......+||+++|+|++|+ |||.
T Consensus 2 ~~v~viG-~~~~D~~~~~~-----------~~~~~--------------------~~~~~~~~GG~~~NvA~~la-~LG~ 48 (311)
T 2dcn_A 2 AKLITLG-EILIEFNALSP-----------GPLRH--------------------VSYFEKHVAGSEANYCVAFI-KQGN 48 (311)
T ss_dssp CEEEEES-CCEEEEEESSS-----------SCGGG--------------------CCEEEEEEECHHHHHHHHHH-HTTC
T ss_pred CCEEEEC-CceEEEecCCC-----------Ccccc--------------------cceeeecCCChHHHHHHHHH-HCCC
Confidence 4799999 99999987431 11000 12578899999999999999 8999
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCC--eeEeecc--ccccCCCccccchhhcCC
Q 028423 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGN--RTMRPCL--SNAVKIQADELIAEDVKG 170 (209)
Q Consensus 96 ~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~Ge--R~~~~~~--g~~~~l~~~~i~~~~i~~ 170 (209)
++.++|.+|+|.+|+++++.|++.||+++++.+.+ .+|+.+++.++++|+ |++++++ ++...+++++++.+.+++
T Consensus 49 ~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 128 (311)
T 2dcn_A 49 ECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKS 128 (311)
T ss_dssp EEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTT
T ss_pred ceEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcChHHHcC
Confidence 99999999999999999999999999999998765 489999999988899 9887664 556778888888778899
Q ss_pred ccEEEEeCCcc-------HHHHHHHHhcCCeEEEecC
Q 028423 171 SKVLHLALYLK-------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 171 ~d~v~i~g~~~-------~~~~~~ar~~g~~vsfd~~ 200 (209)
+|++|++++.+ +...++++.+... +||..
T Consensus 129 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~-~~D~~ 164 (311)
T 2dcn_A 129 ADLVHSSGITLAISSTAKEAVYKAFEIASNR-SFDTN 164 (311)
T ss_dssp CSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE-EEECC
T ss_pred CCEEEEeCcccccChHHHHHHHHHHHHHHHh-CcCcc
Confidence 99999998764 2233445555555 88864
No 40
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.86 E-value=1.2e-20 Score=160.49 Aligned_cols=151 Identities=23% Similarity=0.174 Sum_probs=119.7
Q ss_pred eEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcCCC
Q 028423 17 LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVP 96 (209)
Q Consensus 17 ~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG~~ 96 (209)
.|++++|++++|+++.+ ++ |. .|..... ......+||+++|+|++|+ |||.+
T Consensus 3 ~I~~v~g~~~~D~~~~~-----~~-~~-~g~~~~~--------------------~~~~~~~GG~~~NvA~~la-~LG~~ 54 (309)
T 3cqd_A 3 RIYTLTLAPSLDSATIT-----PQ-IY-PEGKLRC--------------------TAPVFEPGGGGINVARAIA-HLGGS 54 (309)
T ss_dssp CEEEECSSCEEEEEEEE-----SC-CC-SSSEEEC--------------------CCCEEEEESHHHHHHHHHH-HTTCC
T ss_pred eEEEEeccchheEEEEc-----CC-Cc-CCCeeec--------------------cceeecCCchHHHHHHHHH-HcCCC
Confidence 57766559999999999 55 33 3443332 2688999999999999999 89999
Q ss_pred eEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEE-EcCCCCeeEeeccccccCCCccccch------hhcC
Q 028423 97 CGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCL-VDASGNRTMRPCLSNAVKIQADELIA------EDVK 169 (209)
Q Consensus 97 ~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~-i~~~GeR~~~~~~g~~~~l~~~~i~~------~~i~ 169 (209)
+.++|.+|+| +|+++++.|++.|||++++...+ .|+.++++ ++++|+|+++..+++ .+++++++. +.++
T Consensus 55 ~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~ 130 (309)
T 3cqd_A 55 ATAIFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIES 130 (309)
T ss_dssp EEEEEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHHTSCT
T ss_pred eEEEEEecCc-hHHHHHHHHHHcCCCceeEEcCC-CCeeEEEEEEcCCCCEEEEEcCCC--CCCHHHHHHHHHHHHHhhc
Confidence 9999999997 99999999999999999987654 47777777 888899988777765 356555431 3477
Q ss_pred CccEEEEeCCcc--------HHHHHHHHhcCCeEEEecC
Q 028423 170 GSKVLHLALYLK--------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 170 ~~d~v~i~g~~~--------~~~~~~ar~~g~~vsfd~~ 200 (209)
+ |++|++|+.+ ...++.+|++|++++||..
T Consensus 131 ~-~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 168 (309)
T 3cqd_A 131 G-AILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSS 168 (309)
T ss_dssp T-CEEEEESCCCTTCCHHHHHHHHHHHHTTTCEEEEECC
T ss_pred C-CEEEEECCCCCCCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 8 9999999764 2345677899999999964
No 41
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=99.85 E-value=9.1e-21 Score=161.77 Aligned_cols=151 Identities=16% Similarity=0.172 Sum_probs=121.8
Q ss_pred CeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcCC
Q 028423 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (209)
Q Consensus 16 ~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG~ 95 (209)
++|+++| ++++|++...+ +.. . . .......+||+++|+|++|+ |||.
T Consensus 2 ~~v~viG-~~~~D~~~~~~-----------~~~-~-------------~------~~~~~~~~GG~~~N~A~~la-~LG~ 48 (313)
T 2v78_A 2 VDVIALG-EPLIQFNSFNP-----------GPL-R-------------F------VNYFEKHVAGSELNFCIAVV-RNHL 48 (313)
T ss_dssp CCEEEEC-CCEEEEEESSS-----------SCG-G-------------G------CCEEEEEEECHHHHHHHHHH-HTTC
T ss_pred CeEEEEC-cceEEEecCCC-----------Ccc-c-------------c------cceeEecCCChHHHHHHHHH-HCCC
Confidence 3799999 99999986331 110 0 0 12678899999999999999 8999
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEE--EcCCCCeeEeecc--ccccCCCccccchhhcCC
Q 028423 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCL--VDASGNRTMRPCL--SNAVKIQADELIAEDVKG 170 (209)
Q Consensus 96 ~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~--i~~~GeR~~~~~~--g~~~~l~~~~i~~~~i~~ 170 (209)
++.++|.+|+|.+|+++++.|++.||+++++.+.+ .+|+.+++. ++++|+|++++++ ++...+++++++.+.+++
T Consensus 49 ~~~~i~~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~ 128 (313)
T 2v78_A 49 SCSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRN 128 (313)
T ss_dssp CEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCHHHHHT
T ss_pred cEEEEEEeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCHHHhcC
Confidence 99999999999999999999999999999998765 489999998 8888999987665 556778888888777889
Q ss_pred ccEEEEeCCcc-------HHHHHHHHhcCCeEEEecC
Q 028423 171 SKVLHLALYLK-------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 171 ~d~v~i~g~~~-------~~~~~~ar~~g~~vsfd~~ 200 (209)
+|++|++++.+ +...++++.+... +||..
T Consensus 129 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~-~~D~~ 164 (313)
T 2v78_A 129 SRLVHSTGITLAISDNAKEAVIKAFELAKSR-SLDTN 164 (313)
T ss_dssp SSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE-EEECC
T ss_pred CCEEEEcCchhhcChHHHHHHHHHHHHHHHh-CcCCc
Confidence 99999998865 2233445555555 88864
No 42
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.84 E-value=4.4e-20 Score=158.42 Aligned_cols=152 Identities=14% Similarity=0.153 Sum_probs=121.9
Q ss_pred CCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcC
Q 028423 15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (209)
Q Consensus 15 ~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG 94 (209)
++.++++| ++++|+++.+ ++ |.+ |....+ ......+||+++|+|++|+ |||
T Consensus 2 ~m~i~v~g-~~~~D~~~~v-----~~-~~~-g~~~~~--------------------~~~~~~~GG~~~NvA~~la-~LG 52 (323)
T 2f02_A 2 SLIVTVTM-NPSIDISYLL-----DH-LKL-DTVNRT--------------------SQVTKTPGGKGLNVTRVIH-DLG 52 (323)
T ss_dssp CCEEEEES-SCEEEEEEEC-----SC-CCT-TSEEEE--------------------SCEEEEEESHHHHHHHHHH-HHT
T ss_pred ceEEEEec-CceeEEEEec-----CC-ccc-CCEEEe--------------------ceEEEcCCcHHHHHHHHHH-HcC
Confidence 36799999 9999999999 55 433 444332 2688999999999999999 899
Q ss_pred CCeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeeccccccCCCccccch------hhc
Q 028423 95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA------EDV 168 (209)
Q Consensus 95 ~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~------~~i 168 (209)
.++.++|.+|+ ++|+++++.|++.||+++++...+ .|++++++++++ +|+++..+++ .+++++++. +.+
T Consensus 53 ~~~~~~~~vG~-~~G~~i~~~L~~~gV~~~~v~~~~-~t~~~~~~~~~~-~~~~~~~~g~--~l~~~~~~~~~~~~~~~~ 127 (323)
T 2f02_A 53 GDVIATGVLGG-FHGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEG-NQTEILEAGP--TVSPEEISNFLENFDQLI 127 (323)
T ss_dssp CCEEEEEEEEH-HHHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEETT-EEEEEEECCC--BCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEecc-chHHHHHHHHHHCCCceeEEEcCC-CCeeEEEEEcCC-CeEEEECCCC--CCCHHHHHHHHHHHHHhc
Confidence 99999999996 699999999999999999988754 588888888866 7777666664 466665442 246
Q ss_pred CCccEEEEeCCcc--------HHHHHHHHhcCCeEEEecC
Q 028423 169 KGSKVLHLALYLK--------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 169 ~~~d~v~i~g~~~--------~~~~~~ar~~g~~vsfd~~ 200 (209)
+++|++|++|+.+ ...++.+|+.|++++||..
T Consensus 128 ~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~ 167 (323)
T 2f02_A 128 KQAEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTS 167 (323)
T ss_dssp TTCSEEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECC
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHHHHHHCCCEEEEECC
Confidence 8999999998764 2346778899999999964
No 43
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.83 E-value=1.3e-19 Score=156.23 Aligned_cols=151 Identities=14% Similarity=0.179 Sum_probs=120.1
Q ss_pred CeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcCC
Q 028423 16 ALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV 95 (209)
Q Consensus 16 ~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG~ 95 (209)
+.++++| ++++|+++.+ +++ ..|..... ......+||+++|+|++|+ |||.
T Consensus 21 Mi~~v~G-~~~~D~~~~~-----~~~--~~g~~~~~--------------------~~~~~~~GG~~~NvA~~la-~LG~ 71 (330)
T 2jg1_A 21 MILTLTL-NPSVDISYPL-----TAL--KLDDVNRV--------------------QEVSKTAGGKGLNVTRVLA-QVGE 71 (330)
T ss_dssp CEEEEES-SCEEEEEEEE-----SCC--CTTSEEEE--------------------SCCEEEEECHHHHHHHHHH-HHTC
T ss_pred EEEEEec-chhheEEEec-----CCc--cCCceEEe--------------------ceEEEcCCchHHHHHHHHH-HhCC
Confidence 3566788 9999999999 555 23444332 2688999999999999999 8999
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeeccccccCCCccccch------hhcC
Q 028423 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA------EDVK 169 (209)
Q Consensus 96 ~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~------~~i~ 169 (209)
++.++|.+|+ ++|+++++.|++.|||++++...+ .|++++++++++ +|+++..+++ .+++++++. +.++
T Consensus 72 ~~~~i~~vG~-~~G~~l~~~L~~~gV~~~~v~~~~-~t~~~~~~v~~~-~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~ 146 (330)
T 2jg1_A 72 PVLASGFIGG-ELGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHEG-QQTEILEQGP--EIDNQEAAGFIKHFEQMME 146 (330)
T ss_dssp CEEEEEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEEEETT-EEEEEEECCC--BCCHHHHHHHHHHHHHHGG
T ss_pred CeEEEEEecc-hhHHHHHHHHHHCCCceeEEEccC-CCeeEEEEEeCC-CcEEEECCCC--CCCHHHHHHHHHHHHHhcC
Confidence 9999999996 799999999999999999988754 588998888866 7777666654 466555432 2368
Q ss_pred CccEEEEeCCcc--------HHHHHHHHhcCCeEEEecC
Q 028423 170 GSKVLHLALYLK--------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 170 ~~d~v~i~g~~~--------~~~~~~ar~~g~~vsfd~~ 200 (209)
++|++|++|+.+ ...++.||++|++|+||..
T Consensus 147 ~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 185 (330)
T 2jg1_A 147 KVEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCS 185 (330)
T ss_dssp GCSEEEEESCCCBTSCTTHHHHHHHHHHTTTCCEEEECC
T ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECC
Confidence 999999998764 2346778999999999974
No 44
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.83 E-value=4.8e-20 Score=160.61 Aligned_cols=159 Identities=18% Similarity=0.136 Sum_probs=119.2
Q ss_pred cCCCCeEEEecCceeEEEEee--cCHHHHhhC----CCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHH
Q 028423 12 ASQAALILGLQPAALIDHVAR--VDWSLLDQI----PGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNT 85 (209)
Q Consensus 12 ~~~~~~Il~iG~~~~vD~i~~--v~~~~l~~~----p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~ 85 (209)
..++.+|+++| ++++|+++. + +++ |.+. . .+ ......+||+ +|+
T Consensus 50 ~~~~~~ilvvG-~~~~D~~~~g~v-----~r~~p~~p~~~--~-~~--------------------~~~~~~~GG~-~Nv 99 (352)
T 4e84_A 50 QLARSRVLVVG-DVMLDRYWFGNV-----DRISPEAPVPV--V-HV--------------------QRQEERLGGA-ANV 99 (352)
T ss_dssp HHTTCEEEEEE-CEEEEEEEEEEE-----EEECSSSSSEE--E-EE--------------------EEEEEEEEEH-HHH
T ss_pred hcCCCcEEEEC-ccceEEEEeecc-----cccCCCCCcce--E-Ee--------------------eEEEEecChH-HHH
Confidence 35678899999 999999987 4 444 4321 1 11 2578899997 899
Q ss_pred HHHHHHhcCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeec-cccccCCCcccc-
Q 028423 86 IRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPC-LSNAVKIQADEL- 163 (209)
Q Consensus 86 A~~la~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~-~g~~~~l~~~~i- 163 (209)
|++|+ |||.++.++|.||+|.+|+++++.|++.||++..+...+.+|+.+++++++++++..+.+ .+.+..+.++.+
T Consensus 100 A~~la-~LG~~v~~ig~vG~D~~G~~i~~~L~~~GV~~~~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (352)
T 4e84_A 100 ARNAV-TLGGQAGLLCVVGCDEPGERIVELLGSSGVTPHLERDPALPTTIKLRVLARQQQLLRVDFEAMPTHEVLLAGLA 178 (352)
T ss_dssp HHHHH-HTTCEEEEEEEEESSHHHHHHHHHHTTTSCEEEEEEETTSCCCEEEEEEESSCEEEEEEECCCCCHHHHHHHHH
T ss_pred HHHHH-HcCCCEEEEEEeCCChhHHHHHHHHHHcCCceeeEECCCCCCceEEEEEcCCceEEEEEcCCCCCHHHHHHHHH
Confidence 99999 899999999999999999999999999999995444334589999999986666554433 232222222111
Q ss_pred -chhhcCCccEEEEeCCc------cHHHHHHHHhcCCeEEEecCc
Q 028423 164 -IAEDVKGSKVLHLALYL------KKLLFNLARDSLSSFSFYSII 201 (209)
Q Consensus 164 -~~~~i~~~d~v~i~g~~------~~~~~~~ar~~g~~vsfd~~~ 201 (209)
..+.++++|++|+++|. ....++.||++|++|+||...
T Consensus 179 ~~~~~l~~~~~v~~~g~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 223 (352)
T 4e84_A 179 RFDVLLPQHDVVLMSDYAKGGLTHVTTMIEKARAAGKAVLVDPKG 223 (352)
T ss_dssp HHHHHGGGCSEEEEECCSSSSCSSHHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHhcccCCEEEEeCCCCCCHHHHHHHHHHHHhcCCEEEEECCC
Confidence 13468899999999765 245678899999999999754
No 45
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.81 E-value=2.3e-19 Score=151.62 Aligned_cols=140 Identities=17% Similarity=0.194 Sum_probs=106.1
Q ss_pred CCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcC
Q 028423 15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (209)
Q Consensus 15 ~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG 94 (209)
+++|+++| ++++|++ | . ...+||+++|+|++|+ |||
T Consensus 3 ~~~v~viG-~~~~D~~-----------p------------------------------~-~~~~GG~~~N~A~~la-~LG 38 (296)
T 2qhp_A 3 NNIIVGMG-EALWDVL-----------P------------------------------E-GKKIGGAPANFAYHVS-QFG 38 (296)
T ss_dssp CCEEEEES-CCEEEEE-----------T------------------------------T-EEEEECHHHHHHHHHH-HTT
T ss_pred cceEEEEc-hhheEec-----------C------------------------------C-CCCCCCHHHHHHHHHH-HcC
Confidence 45899999 9999996 2 1 2469999999999999 899
Q ss_pred CCeEEEEEecCChhHHHHHHHHHhCCCccceeEec-CCCCeeEEEEEcCCCCeeEeecccc-ccCCCccccchhhcCCcc
Q 028423 95 VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMK-RGPTGQCVCLVDASGNRTMRPCLSN-AVKIQADELIAEDVKGSK 172 (209)
Q Consensus 95 ~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~-~~~T~~~~v~i~~~GeR~~~~~~g~-~~~l~~~~i~~~~i~~~d 172 (209)
.++.++|.+|+|.+|+.+++.|++.|| +++.+. +.+|+.+++.++++|+|++..+.+. ...+.+++...+.++++|
T Consensus 39 ~~~~~~~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 116 (296)
T 2qhp_A 39 FDSRVVSAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEGVAWDNIPFTDELKRLALNTR 116 (296)
T ss_dssp CEEEEEEEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSSCGGGCCCCCHHHHHHHHTEE
T ss_pred CCeeEEEEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecCChhhhCCcchhhHhhhcCCC
Confidence 999999999999999999999999999 777766 4589999998888899988777654 345654444445688999
Q ss_pred EEEEeCCcc--H-------HHHHHHHh-cCCeEEEecC
Q 028423 173 VLHLALYLK--K-------LLFNLARD-SLSSFSFYSI 200 (209)
Q Consensus 173 ~v~i~g~~~--~-------~~~~~ar~-~g~~vsfd~~ 200 (209)
++|++++.. + ..++.+|+ .+++++||..
T Consensus 117 ~v~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~ 154 (296)
T 2qhp_A 117 AVCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDIN 154 (296)
T ss_dssp EEEECSGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECC
T ss_pred EEEECChHhcChHHHHHHHHHHHHHHhcCCCEEEEECc
Confidence 999987542 1 12334455 5889999974
No 46
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.80 E-value=7.8e-19 Score=149.29 Aligned_cols=147 Identities=17% Similarity=0.163 Sum_probs=116.3
Q ss_pred EEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcCCCeE
Q 028423 19 LGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCG 98 (209)
Q Consensus 19 l~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG~~~~ 98 (209)
.+.| ++++|+++.+ +++ . .|..... ......+||+++|+|++|+ |||.++.
T Consensus 4 tv~~-n~~~D~~~~~-----~~~-~-~g~~~~~--------------------~~~~~~~GG~~~N~A~~la-~LG~~~~ 54 (306)
T 2abq_A 4 TVTL-NPSIDYIVQV-----ENF-Q-QGVVNRS--------------------ERDRKQPGGKGINVSRVLK-RLGHETK 54 (306)
T ss_dssp EEES-SCEEEEEEEC-----TTC-C-SSSEEEC--------------------SEEEEEEECHHHHHHHHHH-HTTCCCE
T ss_pred EEec-CchheEEEEc-----CCc-c-cCCeEEe--------------------ceeEecCCchHHHHHHHHH-HcCCCce
Confidence 3455 9999999999 555 2 3444332 2678899999999999999 8999999
Q ss_pred EEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeeccccccCCCccccch--hh---cCCccE
Q 028423 99 LIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--ED---VKGSKV 173 (209)
Q Consensus 99 lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~--~~---i~~~d~ 173 (209)
++|.+|+ .+|+++++.|++.|||++++...+ .|+.++++ ++|+|+++..+++ .+++++++. +. ++++|+
T Consensus 55 ~~~~vG~-~~g~~i~~~L~~~gv~~~~v~~~~-~t~~~~~~--~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~ 128 (306)
T 2abq_A 55 ALGFLGG-FTGAYVRNALEKEEIGLSFIEVEG-DTRINVKI--KGKQETELNGTAP--LIKKEHVQALLEQLTELEKGDV 128 (306)
T ss_dssp EEEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEE--ESSSCEEEBCCCC--CCCHHHHHHHHHHHTTCCTTCE
T ss_pred EEEEecc-hhHHHHHHHHHHcCCceEEEEcCC-CCceEEEE--eCCceEEEECCCC--CCCHHHHHHHHHHHHhccCCCE
Confidence 9999998 899999999999999999998754 58888776 4789987766654 466655542 11 678999
Q ss_pred EEEeCCcc--------HHHHHHHHhcCCeEEEecC
Q 028423 174 LHLALYLK--------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 174 v~i~g~~~--------~~~~~~ar~~g~~vsfd~~ 200 (209)
+|++|+.+ ...++.+|++|++++||..
T Consensus 129 v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 163 (306)
T 2abq_A 129 LVLAGSVPQAMPQTIYRSMTQIAKERGAFVAVDTS 163 (306)
T ss_dssp EEEESCCCTTSCTTHHHHHHHHHHTTTCEEEEECC
T ss_pred EEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 99998764 2356778899999999964
No 47
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.80 E-value=1.2e-18 Score=147.89 Aligned_cols=148 Identities=15% Similarity=0.130 Sum_probs=116.2
Q ss_pred EEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcCCCe
Q 028423 18 ILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPC 97 (209)
Q Consensus 18 Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG~~~ 97 (209)
+.+.| ++++|+++.+ ++ |. .|..... ......+||+++|+|++|+ |||.++
T Consensus 3 ~tvt~-n~~~D~~~~~-----~~-~~-~g~~~~~--------------------~~~~~~~GG~~~N~A~~la-~LG~~~ 53 (306)
T 2jg5_A 3 YTVTF-NPSIDYVIFT-----ND-FK-IDGLNRA--------------------TATYKFAGGKGINVSRVLK-TLDVES 53 (306)
T ss_dssp EEEES-SCEEEEEEEC-----SS-CC-TTSEEEC--------------------SEEEEEEESHHHHHHHHHH-HTTCCC
T ss_pred EEEec-CceEEEEEEc-----CC-cc-cCceEEe--------------------ceeEecCCchHHHHHHHHH-HcCCCe
Confidence 34556 9999999999 55 33 3444332 2678899999999999999 899999
Q ss_pred EEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeeccccccCCCccccch--h-h--cCCcc
Q 028423 98 GLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--E-D--VKGSK 172 (209)
Q Consensus 98 ~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~--~-~--i~~~d 172 (209)
.++|.+|+ ++|+++++.|++.||+++++...+ +|+.++++ ++|+|+++..+++ .+++++++. + . ++++|
T Consensus 54 ~~~~~vG~-~~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~--~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~ 127 (306)
T 2jg5_A 54 TALGFAGG-FPGKFIIDTLNNSAIQSNFIEVDE-DTRINVKL--KTGQETEINAPGP--HITSTQFEQLLQQIKNTTSED 127 (306)
T ss_dssp EEEEEECH-HHHHHHHHHHHHTTCEECCEECSS-CCEEEEEE--ESSSEEEEECCCC--CCCHHHHHHHHHHHTTCCTTC
T ss_pred eEEEEecC-cchHHHHHHHHHCCCceeEEEcCC-CCeEEEEE--cCCCEEEEECCCC--CCCHHHHHHHHHHHHhccCCC
Confidence 99999999 799999999999999999988753 58888776 4789987777664 456555442 1 1 67899
Q ss_pred EEEEeCCcc--------HHHHHHHHhcCCeEEEecC
Q 028423 173 VLHLALYLK--------KLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 173 ~v~i~g~~~--------~~~~~~ar~~g~~vsfd~~ 200 (209)
++|++|+.+ ...++.+|++|++++||..
T Consensus 128 ~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 163 (306)
T 2jg5_A 128 IVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAE 163 (306)
T ss_dssp EEEEESCCCTTSCTTHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEeCCCCCCCChHHHHHHHHHHHHCCCEEEEECC
Confidence 999998764 2346778889999999963
No 48
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.79 E-value=3.4e-18 Score=148.04 Aligned_cols=127 Identities=13% Similarity=0.128 Sum_probs=102.8
Q ss_pred CceEecCchHHHHHHHHHHhcCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCe-eEeec
Q 028423 73 PIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNR-TMRPC 151 (209)
Q Consensus 73 ~~~~~~GG~a~N~A~~la~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR-~~~~~ 151 (209)
.....+||+++|+|++|+ |||.++.++|.+|+|.+|+++++.|++.||+++++...+.+|+.+++..++ |+| +++.+
T Consensus 38 ~~~~~~GG~~~NvA~~la-~LG~~~~~i~~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~t~~~~v~~~~-~~r~~~v~~ 115 (351)
T 2afb_A 38 SFDVTYGGAEANVAAFLA-QMGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGA-SQRPSKVVY 115 (351)
T ss_dssp EEEEEEECHHHHHHHHHH-HTTSEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCEEEEECCB-TTBCCEEEE
T ss_pred eeeEecCChHHHHHHHHH-HcCCCeEEEEEeCCCHHHHHHHHHHHHcCCcceeEEECCCcceEEEEEecC-CCCcceEEE
Confidence 678899999999999999 899999999999999999999999999999999998755689999887664 555 44443
Q ss_pred c---ccccCCCccccchh-hcCCccEEEEeCCcc----------HHHHHHHHhcCCeEEEecCc
Q 028423 152 L---SNAVKIQADELIAE-DVKGSKVLHLALYLK----------KLLFNLARDSLSSFSFYSII 201 (209)
Q Consensus 152 ~---g~~~~l~~~~i~~~-~i~~~d~v~i~g~~~----------~~~~~~ar~~g~~vsfd~~~ 201 (209)
. ++...+++++++.+ .++++|+||++++.+ ...++.+++.|++++||...
T Consensus 116 ~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~ 179 (351)
T 2afb_A 116 DRAHSAISEAKREDFDWEKILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNY 179 (351)
T ss_dssp ECTTCTTTTCCGGGCCHHHHTTTEEEEEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCC
T ss_pred eCCCChhhhCChhhCCHHHhhcCCCEEEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCC
Confidence 3 23345677776643 478999999999864 22456778899999999753
No 49
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.72 E-value=9e-17 Score=137.27 Aligned_cols=143 Identities=17% Similarity=0.200 Sum_probs=108.2
Q ss_pred CCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcC
Q 028423 15 AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFG 94 (209)
Q Consensus 15 ~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG 94 (209)
.++|+++| ++++|++... .| .....+||+++|+|++|+ |||
T Consensus 2 ~~~ilviG-~~~iD~~~~~-----------~~--------------------------~~~~~~GG~~~NvA~~la-~LG 42 (313)
T 3kd6_A 2 SLSLLVIG-SLAFDDIETP-----------FG--------------------------RSDNTLGGSSTYIALSAS-YFT 42 (313)
T ss_dssp -CCEEEES-CCEEEEEECS-----------SC--------------------------EEEEEEECHHHHHHHHHT-TTC
T ss_pred CccEEEEe-EEEEeeecCC-----------CC--------------------------cccccCCCHHHHHHHHHH-HhC
Confidence 35799999 9999999643 11 357889999999999999 899
Q ss_pred C-CeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEE--EEEcCCCCeeEeeccccccCCCccccchhhcCC
Q 028423 95 V-PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCV--CLVDASGNRTMRPCLSNAVKIQADELIAEDVKG 170 (209)
Q Consensus 95 ~-~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~--v~i~~~GeR~~~~~~g~~~~l~~~~i~~~~i~~ 170 (209)
. ++.++|.||+| +|+++++.|++.|||++++.+.+ ++|.... ...+.++++++....++...+.++ ..+.+++
T Consensus 43 ~~~~~~ig~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 119 (313)
T 3kd6_A 43 DEPIRMVGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPH--VPQYYRD 119 (313)
T ss_dssp SSCEEEEEEEETT-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCC--CCGGGTT
T ss_pred CCceEEEEecCCC-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCcc--chHHHcc
Confidence 9 99999999999 99999999999999999998875 4663221 122345667777666666666543 2356889
Q ss_pred ccEEEEeCCccHHHHHHHH--hcCCeEEEec
Q 028423 171 SKVLHLALYLKKLLFNLAR--DSLSSFSFYS 199 (209)
Q Consensus 171 ~d~v~i~g~~~~~~~~~ar--~~g~~vsfd~ 199 (209)
+|++|+++..++...+.++ +.+.+|+||.
T Consensus 120 ~~~v~~~~~~~~~~~~~~~~~~~~~~v~~Dp 150 (313)
T 3kd6_A 120 SKFVCLGNIDPELQLKVLDQIDDPKLVVCDT 150 (313)
T ss_dssp CSEEEECSSCHHHHHHHHTTCSSCSEEEEEC
T ss_pred CCEEEEcCCCHHHHHHHHHHHhhCCEEEEcC
Confidence 9999997765543333332 4678999996
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.69 E-value=1.1e-16 Score=135.93 Aligned_cols=120 Identities=17% Similarity=0.081 Sum_probs=96.1
Q ss_pred CceEecCchHHHHHHHHHHhcCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeecc
Q 028423 73 PIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL 152 (209)
Q Consensus 73 ~~~~~~GG~a~N~A~~la~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~ 152 (209)
.....+||+++|+|++|+ |||.++.++|.||+|. +.+++.|++.|||++++.. +.+|+.+.++ +++|+|+++.+.
T Consensus 30 ~~~~~~GG~~~NvA~~la-~LG~~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~~-~~~t~~~~i~-~~~g~~~~~~~~ 104 (298)
T 1vk4_A 30 KREIAYGGGVVMGAITSS-LLGVKTKVITKCTRED--VSKFSFLRDNGVEVVFLKS-PRTTSIENRY-GSDPDTRESFLI 104 (298)
T ss_dssp EEEEEEECHHHHHHHHHH-HTTCEEEEEEEECTTT--GGGGTTTGGGTCEEEEEEC-SSCEEEEEEC------CCEEEEE
T ss_pred eEEEecCCHHHHHHHHHH-HcCCceEEEEEEcCCH--HHHHHHHHHcCCceEEEec-CCCcEEEEEE-cCCCCeeEEEec
Confidence 467889999999999999 8999999999999998 7899999999999998764 4567767665 557898888777
Q ss_pred ccccCCCccccchhhcCCccEEEEeCCc----cHHHHHHHHhcCCeEEEecC
Q 028423 153 SNAVKIQADELIAEDVKGSKVLHLALYL----KKLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 153 g~~~~l~~~~i~~~~i~~~d~v~i~g~~----~~~~~~~ar~~g~~vsfd~~ 200 (209)
++...+++++++. .+++++|++++. ....++.++++|++|+||..
T Consensus 105 ~~~~~l~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~v~~D~~ 153 (298)
T 1vk4_A 105 SAADPFTESDLAF---IEGEAVHINPLWYGEFPEDLIPVLRRKVMFLSADAQ 153 (298)
T ss_dssp ECCCCCCGGGGGG---CCSSEEEECCSSTTSSCGGGHHHHHHHCSEEEEETH
T ss_pred cccccCCHHHcCc---CCCCEEEECCcccccccHHHHHHHHHcCCEEEEecC
Confidence 7777777776643 689999998873 24567888899999999975
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=96.81 E-value=0.00025 Score=59.73 Aligned_cols=84 Identities=13% Similarity=0.158 Sum_probs=54.5
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCCccceeEec--CCCCeeEEEEEcCCCCeeEeeccccccCCCccccch--hh----
Q 028423 96 PCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMK--RGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA--ED---- 167 (209)
Q Consensus 96 ~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~--~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~--~~---- 167 (209)
.+.++|.+|+|. |+++ |++.||+++++... .++|++++ ..+ ..+++++++. +.
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~~t~~~~-------------~~g--~~l~~~~i~~~~~~~~~~ 72 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSNHTGYAH-------------WKG--QVLNSDELQELYEGLRLN 72 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESSCTTSSC-------------CCE--EECCHHHHHHHHHHHHHT
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecCCCCcCC-------------ccC--ccCCHHHHHHHHHHHHhc
Confidence 567889999999 9999 99999999988753 22333221 112 2445554431 11
Q ss_pred -cCCccEEEEeCCccH--------HHHHHHHhcCCe--EEEec
Q 028423 168 -VKGSKVLHLALYLKK--------LLFNLARDSLSS--FSFYS 199 (209)
Q Consensus 168 -i~~~d~v~i~g~~~~--------~~~~~ar~~g~~--vsfd~ 199 (209)
++++|++|+ |+... ..++.+|++|.+ ++||-
T Consensus 73 ~~~~~~~v~~-G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp 114 (312)
T 2yxt_A 73 NMNKYDYVLT-GYTRDKSFLAMVVDIVQELKQQNPRLVYVCDP 114 (312)
T ss_dssp TCCCCSEEEE-CCCCCHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CCccCCEEEE-CCCCCHHHHHHHHHHHHHHHhhCCCCeEEECC
Confidence 678999886 54431 334667777765 88994
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=95.31 E-value=0.012 Score=48.45 Aligned_cols=91 Identities=12% Similarity=0.103 Sum_probs=57.3
Q ss_pred hcCCCeEE-EEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeeccccccCCCccccch-----
Q 028423 92 GFGVPCGL-IGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIA----- 165 (209)
Q Consensus 92 rLG~~~~l-ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~----- 165 (209)
-|++.... +|.+|.|. .+..|++.||++.++.. + ++.+..|.|.+ .+ ..++++++..
T Consensus 18 vL~i~~~~~~g~~G~d~----~~~~l~~~Gv~~~~v~t-------~-i~~~~~g~~~~---~g--~~~~~~~~~~~~~~l 80 (283)
T 2ddm_A 18 IVAVQSQVVYGSVGNSI----AVPAIKQNGLNVFAVPT-------V-LLSNTPHYDTF---YG--GAIPDEWFSGYLRAL 80 (283)
T ss_dssp EEEEEEEESSSSSTHHH----HHHHHHHTTCCEEEEEE-------E-EESSCTTSSCC---CE--EECCHHHHHHHHHHH
T ss_pred EEEEecccCCCcchHHH----HHHHHHHcCCeeeEEeE-------E-EeccCCCcCce---ee--eeCCHHHHHHHHHHH
Confidence 36777555 88899883 56799999999998753 1 22355676652 11 2334343321
Q ss_pred -h--hcCCccEEEEeCCccH-------HHHHHHHh--cCCeEEEec
Q 028423 166 -E--DVKGSKVLHLALYLKK-------LLFNLARD--SLSSFSFYS 199 (209)
Q Consensus 166 -~--~i~~~d~v~i~g~~~~-------~~~~~ar~--~g~~vsfd~ 199 (209)
+ .++++++|+++..... ..++.+|+ .|++|+||-
T Consensus 81 ~~~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp 126 (283)
T 2ddm_A 81 QERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDP 126 (283)
T ss_dssp HHTTCCTTCCEEEECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred HhcCCcccCCEEEECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECC
Confidence 1 4668999999654332 23455666 789999994
No 53
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=93.88 E-value=0.21 Score=44.77 Aligned_cols=89 Identities=10% Similarity=0.145 Sum_probs=57.0
Q ss_pred CCCCeEEEecCceeEEEEeecCHHHH----hhCCC------------------------------CCCCeeeecHHHHHH
Q 028423 13 SQAALILGLQPAALIDHVARVDWSLL----DQIPG------------------------------ERGGSIPVAIEELEH 58 (209)
Q Consensus 13 ~~~~~Il~iG~~~~vD~i~~v~~~~l----~~~p~------------------------------~~g~~~~~~~~~~~~ 58 (209)
.+...|++-= |+|||.+++.+.+.+ +++.. -.+.++.+..++..+
T Consensus 25 ~~~~~i~~ay-N~NVDai~~~~~~~i~~li~~~~~~~v~~~~~~~p~~I~s~~dl~~~~~~~~~~G~aaE~~v~~~~~~~ 103 (474)
T 3drw_A 25 PEHLSIYTAY-NANIAAIVKLNQETIQNLINAFDPDEVKRRIEEYPREINEPIDFVARLVHTLKLGKPAAVPLVNEKMNE 103 (474)
T ss_dssp CTTCEEEEES-CCEEEEEEECCHHHHHHHHHTSCHHHHHHHHHHCCSSBSSHHHHHHHHHHHHHHTCCEEEEECCTTHHH
T ss_pred cccCceEEEe-cccEEEEEEcCHHHHHHHHHhcChHHhhhhhhcCCccCCCHHHHHHHHHHHHhCCCceEEecccHhHHH
Confidence 3456788888 999999999976432 22221 123344444333444
Q ss_pred HHHHHhhccCCCCCCceEecCchHHHHHHHHHHhcCC-CeEEEEEecCChhHH
Q 028423 59 ILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGV-PCGLIGAYGDDQQGQ 110 (209)
Q Consensus 59 i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rLG~-~~~lig~VG~D~~G~ 110 (209)
++..-. +......||.|+-.|..|| ++|+ ++.+.+..+.....+
T Consensus 104 ~~~~~~-------~~~~~~~GGnA~imAn~La-~lg~~~Vi~~~p~~sk~~~~ 148 (474)
T 3drw_A 104 WFDKTF-------RYEEERLGGQAGIIANTLA-GLKIRKVIAYTPFLPKRLAE 148 (474)
T ss_dssp HHHHHC-------CCSEEEEESHHHHHHHHHH-HTTCSEEEECCSCCCHHHHT
T ss_pred HHHHhc-------ccceEecCChHHHHHHHHH-HcCCCcEEEecCcCCHHHHH
Confidence 443111 2347889999999999999 7999 577777776544333
No 54
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=92.94 E-value=0.065 Score=47.99 Aligned_cols=36 Identities=14% Similarity=-0.013 Sum_probs=28.2
Q ss_pred EecCchHHHHHHHHHHhcCCCeEE--EEEecCChhHHHHHHHHH
Q 028423 76 TIAGGSVTNTIRGLSVGFGVPCGL--IGAYGDDQQGQLFVSNMQ 117 (209)
Q Consensus 76 ~~~GG~a~N~A~~la~rLG~~~~l--ig~VG~D~~G~~i~~~L~ 117 (209)
...||.|+-.|..+| ++|+++.+ .+.+|. ..++.|.
T Consensus 116 ~~mGGnAgimAn~la-~lg~~~vl~~~~~~s~-----~~~~l~~ 153 (467)
T 1gc5_A 116 LRIGGQAGIMANLLG-GVYRIPTIVHVPQNPK-----LQAELFV 153 (467)
T ss_dssp EEEESHHHHHHHHHH-HTSCCCEEECCSCCCH-----HHHTTSC
T ss_pred cccCccHHHHHHHHH-hcCCCEEEEcCCCCCH-----HHHHhcC
Confidence 399999999999999 79999987 565553 4555554
No 55
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=91.85 E-value=0.14 Score=45.74 Aligned_cols=29 Identities=17% Similarity=0.060 Sum_probs=24.7
Q ss_pred EecCchHHHHHHHHHHhcCCCeEE--EEEecC
Q 028423 76 TIAGGSVTNTIRGLSVGFGVPCGL--IGAYGD 105 (209)
Q Consensus 76 ~~~GG~a~N~A~~la~rLG~~~~l--ig~VG~ 105 (209)
...||.|+-.|..+| ++|+++.+ .+.+|.
T Consensus 111 ~~mGGnA~imAn~la-~lg~~~vl~~~~~~s~ 141 (457)
T 1l2l_A 111 LRMGGQVGIMANLLG-GVYGIPVIAHVPQLSE 141 (457)
T ss_dssp EEEESHHHHHHHHHT-TTSCCCEEECCSSCCH
T ss_pred cccCchHHHHHHHHH-HcCCCEEEEcCCCCCH
Confidence 399999999999999 89999877 565654
No 56
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=89.53 E-value=0.66 Score=41.33 Aligned_cols=120 Identities=12% Similarity=-0.013 Sum_probs=65.5
Q ss_pred eEecCchHHHHHHHHHHhcCCCeEE--EEEecCChhHHHHHHHHHhCCCcccee-----E-------ecCCCCeeEEEEE
Q 028423 75 KTIAGGSVTNTIRGLSVGFGVPCGL--IGAYGDDQQGQLFVSNMQFSGVDVSRL-----R-------MKRGPTGQCVCLV 140 (209)
Q Consensus 75 ~~~~GG~a~N~A~~la~rLG~~~~l--ig~VG~D~~G~~i~~~L~~~GVd~~~v-----~-------~~~~~T~~~~v~i 140 (209)
....||.|...|..++ ++|+++.+ ++.+|.. +.+.|...+|....+ . ....+....+|+-
T Consensus 107 ~~~~GGnA~imAn~la-~lg~~~vl~~~~~l~~~-----~~~lf~~~~i~~p~~~~~~~~l~~~~e~~~~~~~~iH~I~E 180 (455)
T 1ua4_A 107 ELRMGGQAGIMANLLG-GVYGVPVIVHVPQLSRL-----QANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCIHYIYE 180 (455)
T ss_dssp EEEEESHHHHHHHHHT-TTTCCCEEECCSCCCHH-----HHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCEEEEEE
T ss_pred ccccCCcHHHHHHHHH-HcCCCEEEEeCCCCCHH-----HHHhcCCCCeEeecccCCccccccchhhccCCCCCceEEEE
Confidence 3499999999999999 89999988 7777643 455554333433111 0 0012344454543
Q ss_pred cCCCCe-----------eEeeccccccCCC-ccccch---hhcCCccEEEEeCCcc--H----HHH-------HHHHhcC
Q 028423 141 DASGNR-----------TMRPCLSNAVKIQ-ADELIA---EDVKGSKVLHLALYLK--K----LLF-------NLARDSL 192 (209)
Q Consensus 141 ~~~GeR-----------~~~~~~g~~~~l~-~~~i~~---~~i~~~d~v~i~g~~~--~----~~~-------~~ar~~g 192 (209)
=++|++ -++.+.-.+..+. .+++.. +...++|.+.++|+.+ + ..+ +..+..+
T Consensus 181 f~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~ 260 (455)
T 1ua4_A 181 FPRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNERE 260 (455)
T ss_dssp ECTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCC
Confidence 245553 2333333233332 233321 1223499999999863 1 111 1225666
Q ss_pred CeEEEecC
Q 028423 193 SSFSFYSI 200 (209)
Q Consensus 193 ~~vsfd~~ 200 (209)
++|-|+-+
T Consensus 261 ~~iH~ElA 268 (455)
T 1ua4_A 261 IPVHLEFA 268 (455)
T ss_dssp CCEEEECC
T ss_pred ceEEEEeC
Confidence 77777653
No 57
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=77.46 E-value=23 Score=30.45 Aligned_cols=35 Identities=9% Similarity=-0.054 Sum_probs=24.7
Q ss_pred CccEEEEeCCc--------cHHHHHHHHh--cCCeEEEecCcccc
Q 028423 170 GSKVLHLALYL--------KKLLFNLARD--SLSSFSFYSIIITF 204 (209)
Q Consensus 170 ~~d~v~i~g~~--------~~~~~~~ar~--~g~~vsfd~~~~~~ 204 (209)
+.++|++.... ++...++||+ +|+.+..|..--++
T Consensus 167 ~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~ 211 (415)
T 2fq6_A 167 NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAG 211 (415)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTT
T ss_pred CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCccc
Confidence 35677765432 3567788999 99999999965443
No 58
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=77.03 E-value=19 Score=31.19 Aligned_cols=36 Identities=11% Similarity=0.077 Sum_probs=25.3
Q ss_pred CccEEEEeCCc--------cHHHHHHHHhcCCeEEEecCccccc
Q 028423 170 GSKVLHLALYL--------KKLLFNLARDSLSSFSFYSIIITFF 205 (209)
Q Consensus 170 ~~d~v~i~g~~--------~~~~~~~ar~~g~~vsfd~~~~~~~ 205 (209)
+.++|+++... ++...++|+++|+.+..|..-.+..
T Consensus 167 ~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~ 210 (430)
T 3ri6_A 167 TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPY 210 (430)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTT
T ss_pred CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccc
Confidence 45667765432 3567788999999999998655443
No 59
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=74.04 E-value=21 Score=30.52 Aligned_cols=35 Identities=9% Similarity=0.015 Sum_probs=24.6
Q ss_pred CccEEEEeCCc--------cHHHHHHHHhcCCeEEEecCcccc
Q 028423 170 GSKVLHLALYL--------KKLLFNLARDSLSSFSFYSIIITF 204 (209)
Q Consensus 170 ~~d~v~i~g~~--------~~~~~~~ar~~g~~vsfd~~~~~~ 204 (209)
+.++|+++... ++...++|+++|+.+..|.+-.+.
T Consensus 166 ~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~ 208 (414)
T 3ndn_A 166 PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATP 208 (414)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHH
T ss_pred CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCccc
Confidence 45677765432 356678899999999999865444
No 60
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=71.55 E-value=23 Score=29.88 Aligned_cols=26 Identities=12% Similarity=-0.083 Sum_probs=20.0
Q ss_pred cHHHHHHHHhcCCeEEEecCcccccc
Q 028423 181 KKLLFNLARDSLSSFSFYSIIITFFS 206 (209)
Q Consensus 181 ~~~~~~~ar~~g~~vsfd~~~~~~~~ 206 (209)
++...++||++|+.+..|..-.+++.
T Consensus 170 l~~i~~la~~~g~~li~D~~~~~~~~ 195 (392)
T 3qhx_A 170 IAGIAQLGADSSAKVLVDNTFASPAL 195 (392)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTCTTT
T ss_pred HHHHHHHHHHcCCEEEEECCCccccc
Confidence 35677889999999999997555443
No 61
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=70.39 E-value=26 Score=29.82 Aligned_cols=37 Identities=8% Similarity=-0.065 Sum_probs=25.7
Q ss_pred CccEEEEeCCc--------cHHHHHHHHhcCCeEEEecCcccccc
Q 028423 170 GSKVLHLALYL--------KKLLFNLARDSLSSFSFYSIIITFFS 206 (209)
Q Consensus 170 ~~d~v~i~g~~--------~~~~~~~ar~~g~~vsfd~~~~~~~~ 206 (209)
+.++|+++... ++...++|+++|+.+..|..-.+++.
T Consensus 152 ~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~ 196 (400)
T 3nmy_A 152 DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPML 196 (400)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHH
T ss_pred CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc
Confidence 45666665422 35677889999999999997655443
No 62
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=67.87 E-value=1.3 Score=36.25 Aligned_cols=30 Identities=0% Similarity=0.024 Sum_probs=20.6
Q ss_pred ccEEEEeCCcc----HHHHHHHHhcCCe-EEEecC
Q 028423 171 SKVLHLALYLK----KLLFNLARDSLSS-FSFYSI 200 (209)
Q Consensus 171 ~d~v~i~g~~~----~~~~~~ar~~g~~-vsfd~~ 200 (209)
+|+++++.... ....+.+++.+++ |+||-.
T Consensus 95 ~~~v~~G~l~~~~~~~~~~~~~~~~~~~~vvlDp~ 129 (288)
T 1jxh_A 95 IDTTKIGMLAETDIVEAVAERLQRHHVRNVVLDTV 129 (288)
T ss_dssp CSEEEECCCCSHHHHHHHHHHHHHTTCCSEEEECC
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHCCCCeEEEcCc
Confidence 78888754322 2345677889996 999953
No 63
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=57.06 E-value=65 Score=27.89 Aligned_cols=35 Identities=9% Similarity=0.022 Sum_probs=25.3
Q ss_pred cEEEEeCCc--------cHHHHHHHHhcCCeEEEecCcccccc
Q 028423 172 KVLHLALYL--------KKLLFNLARDSLSSFSFYSIIITFFS 206 (209)
Q Consensus 172 d~v~i~g~~--------~~~~~~~ar~~g~~vsfd~~~~~~~~ 206 (209)
++|+++... ++...++||++|+.+..|..-.+++.
T Consensus 202 ~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~ 244 (445)
T 1qgn_A 202 NLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLN 244 (445)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT
T ss_pred CEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 677775432 35677889999999999997655543
No 64
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=44.13 E-value=1.4e+02 Score=24.93 Aligned_cols=36 Identities=6% Similarity=-0.104 Sum_probs=25.3
Q ss_pred CccEEEEeCCc--------cHHHHHHHHh-cCCeEEEecCccccc
Q 028423 170 GSKVLHLALYL--------KKLLFNLARD-SLSSFSFYSIIITFF 205 (209)
Q Consensus 170 ~~d~v~i~g~~--------~~~~~~~ar~-~g~~vsfd~~~~~~~ 205 (209)
+.++|+++... ++...++|++ +|+.+..|.+-..|.
T Consensus 147 ~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~ 191 (404)
T 1e5e_A 147 NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPM 191 (404)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTT
T ss_pred CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhh
Confidence 46677775321 3567788999 999999999655443
No 65
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=44.06 E-value=1.4e+02 Score=24.78 Aligned_cols=35 Identities=11% Similarity=-0.000 Sum_probs=23.0
Q ss_pred CccEEEEeCCc--------cHHHHHHHHhcCCeEEEecCcccc
Q 028423 170 GSKVLHLALYL--------KKLLFNLARDSLSSFSFYSIIITF 204 (209)
Q Consensus 170 ~~d~v~i~g~~--------~~~~~~~ar~~g~~vsfd~~~~~~ 204 (209)
+.++|+++... ++...++++++|+.+..|.+-.++
T Consensus 150 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~ 192 (398)
T 1gc0_A 150 ATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTP 192 (398)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHH
T ss_pred CCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCccc
Confidence 45566664321 356678888999999999865433
No 66
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=43.78 E-value=1.4e+02 Score=24.74 Aligned_cols=36 Identities=8% Similarity=-0.026 Sum_probs=25.5
Q ss_pred CccEEEEeCCc--------cHHHHHHHHhcCCeEEEecCccccc
Q 028423 170 GSKVLHLALYL--------KKLLFNLARDSLSSFSFYSIIITFF 205 (209)
Q Consensus 170 ~~d~v~i~g~~--------~~~~~~~ar~~g~~vsfd~~~~~~~ 205 (209)
+.++|+++... ++...++++++|+.+..|..-.+++
T Consensus 144 ~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~ 187 (389)
T 3acz_A 144 NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPC 187 (389)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTT
T ss_pred CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccc
Confidence 45667765321 3567788999999999999766554
No 67
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=42.42 E-value=16 Score=26.52 Aligned_cols=39 Identities=10% Similarity=0.082 Sum_probs=31.2
Q ss_pred CchHHHHHHHHHHhcCCCeEEEEEecCChhHHHHHHHHHhCCCccc
Q 028423 79 GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVS 124 (209)
Q Consensus 79 GG~a~N~A~~la~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~ 124 (209)
+|.+...+..|+ ..|+++.+.+.+|.. .++.|++ ||++-
T Consensus 65 ~g~g~~~~~~L~-~~gv~~VI~g~iG~~-----a~~~L~~-GI~v~ 103 (136)
T 2re2_A 65 AARGVFMLKSAL-DHGANALVLSEIGSP-----GFNFIKN-KMDVY 103 (136)
T ss_dssp SCHHHHHHHHHH-HTTCSEEEESCCBHH-----HHHHHTT-TSEEE
T ss_pred CCccHHHHHHHH-HcCCCEEEECCCCHh-----HHHHHHC-CCEEE
Confidence 466668888888 699999999998754 4488999 99864
No 68
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=36.05 E-value=1.9e+02 Score=24.07 Aligned_cols=35 Identities=9% Similarity=0.030 Sum_probs=24.7
Q ss_pred CccEEEEeCCc--------cHHHHHHHHhcCCeEEEecCcccc
Q 028423 170 GSKVLHLALYL--------KKLLFNLARDSLSSFSFYSIIITF 204 (209)
Q Consensus 170 ~~d~v~i~g~~--------~~~~~~~ar~~g~~vsfd~~~~~~ 204 (209)
+.++|+++... ++...++++++|+.+..|.+-..+
T Consensus 140 ~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~ 182 (412)
T 2cb1_A 140 KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAA 182 (412)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTT
T ss_pred CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccc
Confidence 45677764321 356778899999999999865544
No 69
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=32.74 E-value=1.8e+02 Score=25.01 Aligned_cols=36 Identities=11% Similarity=0.018 Sum_probs=26.2
Q ss_pred CCccEEEEeCCc--------cHHHHHHHHhcCCeEEEecCcccc
Q 028423 169 KGSKVLHLALYL--------KKLLFNLARDSLSSFSFYSIIITF 204 (209)
Q Consensus 169 ~~~d~v~i~g~~--------~~~~~~~ar~~g~~vsfd~~~~~~ 204 (209)
.+.++|+++... ++...++|+++|+.+..|.+-.+.
T Consensus 216 ~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g 259 (464)
T 1ibj_A 216 PQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSP 259 (464)
T ss_dssp SSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCT
T ss_pred cCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCccc
Confidence 356788885432 356778899999999999975543
No 70
>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A
Probab=32.65 E-value=72 Score=21.44 Aligned_cols=45 Identities=11% Similarity=0.114 Sum_probs=28.9
Q ss_pred HHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeeccc
Q 028423 109 GQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLS 153 (209)
Q Consensus 109 G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~g 153 (209)
=+.+.+.|++.|+............+..+.+.||+|.+--+..+.
T Consensus 79 ~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~ 123 (133)
T 2p7o_A 79 VDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGT 123 (133)
T ss_dssp HHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSS
T ss_pred HHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCC
Confidence 455778888999876433222112346667789999987666543
No 71
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=30.29 E-value=99 Score=26.03 Aligned_cols=86 Identities=15% Similarity=0.184 Sum_probs=43.2
Q ss_pred CeEEEEEecCChhHHHHHHHHHhCCC---ccceeEecCCCCeeEEEEEcCCCCeeEeeccccccCCCccccchhhcCCcc
Q 028423 96 PCGLIGAYGDDQQGQLFVSNMQFSGV---DVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSK 172 (209)
Q Consensus 96 ~~~lig~VG~D~~G~~i~~~L~~~GV---d~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~~~i~~~d 172 (209)
++.++|.- ...|+.+++.|.+... +...+.. ....|..+.+ . |. .+..++.+.+.++++|
T Consensus 3 ~VaIvGat--G~vG~el~~lL~~h~fp~~el~~~~s-~~~aG~~~~~-~--~~-----------~~~~~~~~~~~~~~~D 65 (344)
T 3tz6_A 3 SIGIVGAT--GQVGQVMRTLLDERDFPASAVRFFAS-ARSQGRKLAF-R--GQ-----------EIEVEDAETADPSGLD 65 (344)
T ss_dssp EEEEETTT--SHHHHHHHHHHHHTTCCEEEEEEEEC-TTTSSCEEEE-T--TE-----------EEEEEETTTSCCTTCS
T ss_pred EEEEECCC--ChHHHHHHHHHHhCCCCceEEEEEEC-cccCCCceee-c--CC-----------ceEEEeCCHHHhccCC
Confidence 44444444 4679999999998742 2222221 2223333322 1 11 1111222233457899
Q ss_pred EEEEeCCcc--HHHHHHHHhcCCeEEEec
Q 028423 173 VLHLALYLK--KLLFNLARDSLSSFSFYS 199 (209)
Q Consensus 173 ~v~i~g~~~--~~~~~~ar~~g~~vsfd~ 199 (209)
+++.+.-.. ......+.++|++ .+|.
T Consensus 66 vvf~a~~~~~s~~~a~~~~~~G~~-vID~ 93 (344)
T 3tz6_A 66 IALFSAGSAMSKVQAPRFAAAGVT-VIDN 93 (344)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCE-EEEC
T ss_pred EEEECCChHHHHHHHHHHHhCCCE-EEEC
Confidence 998864321 2334455678875 4554
No 72
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=29.83 E-value=1.6e+02 Score=24.12 Aligned_cols=31 Identities=3% Similarity=-0.040 Sum_probs=22.1
Q ss_pred CccEEEEeCCc--------cHHHHHHHHhcCCeEEEecC
Q 028423 170 GSKVLHLALYL--------KKLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 170 ~~d~v~i~g~~--------~~~~~~~ar~~g~~vsfd~~ 200 (209)
+.+++++.... ++...++|+++|+.+..|.+
T Consensus 163 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea 201 (423)
T 3lvm_A 163 DTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDAT 201 (423)
T ss_dssp TEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECT
T ss_pred CcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhh
Confidence 45666665321 35677889999999999974
No 73
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=29.77 E-value=2.4e+02 Score=23.52 Aligned_cols=35 Identities=3% Similarity=-0.078 Sum_probs=24.6
Q ss_pred CccEEEEeCCc--------cHHHHHHHHhcC-CeEEEecCcccc
Q 028423 170 GSKVLHLALYL--------KKLLFNLARDSL-SSFSFYSIIITF 204 (209)
Q Consensus 170 ~~d~v~i~g~~--------~~~~~~~ar~~g-~~vsfd~~~~~~ 204 (209)
+.++|+++... ++...++|+++| +.+..|..-.++
T Consensus 151 ~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~ 194 (403)
T 3cog_A 151 ETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSP 194 (403)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCT
T ss_pred CCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCccc
Confidence 45677765422 356678889999 999999965554
No 74
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=28.92 E-value=1.3e+02 Score=22.41 Aligned_cols=39 Identities=5% Similarity=-0.126 Sum_probs=26.2
Q ss_pred HHHHHHHHHhcCCCeEEEEEecCCh--hHHHHHHHHHhCCCc
Q 028423 83 TNTIRGLSVGFGVPCGLIGAYGDDQ--QGQLFVSNMQFSGVD 122 (209)
Q Consensus 83 ~N~A~~la~rLG~~~~lig~VG~D~--~G~~i~~~L~~~GVd 122 (209)
.-.+..|. ++|.++...+.|+||. ..+.+.+.+++.+.|
T Consensus 31 ~~l~~~L~-~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~D 71 (172)
T 1mkz_A 31 HYLRDSAQ-EAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQ 71 (172)
T ss_dssp HHHHHHHH-HTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHH-HCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCC
Confidence 34566777 6999999999999994 335555554433444
No 75
>2dha_A FLJ20171 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.76 E-value=96 Score=21.72 Aligned_cols=43 Identities=12% Similarity=-0.048 Sum_probs=33.8
Q ss_pred ecCchHHHHHHHHHHhcCCCeEEEEEecCChhHHHHHHHHHhCC
Q 028423 77 IAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSG 120 (209)
Q Consensus 77 ~~GG~a~N~A~~la~rLG~~~~lig~VG~D~~G~~i~~~L~~~G 120 (209)
..||..-.....+. +-...+.+++.+.-+.--+.|++.+.+.|
T Consensus 6 ~~~g~~~~~~~~~~-~~~~~~v~V~nLp~~~te~dl~~~F~~~g 48 (123)
T 2dha_A 6 SGGGTSNEVAQFLS-KENQVIVRMRGLPFTATAEEVVAFFGQHC 48 (123)
T ss_dssp SSCCCCHHHHHHHH-CCSCCEEEECSCCTTCCHHHHHHHHHTTS
T ss_pred CCCCCchhHHhhcc-CCCCCEEEEeCCCCCCCHHHHHHHHHhhC
Confidence 35665555555566 45667899999999999999999999987
No 76
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=28.70 E-value=1.3e+02 Score=19.77 Aligned_cols=41 Identities=15% Similarity=0.137 Sum_probs=26.6
Q ss_pred HHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEe
Q 028423 109 GQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMR 149 (209)
Q Consensus 109 G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~ 149 (209)
=+.+.+.|++.|+....-......-...+.+.||+|.+--+
T Consensus 85 v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel 125 (127)
T 3e5d_A 85 VDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEI 125 (127)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred HHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEE
Confidence 45788899999998764333222223456677899887543
No 77
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=28.41 E-value=2.5e+02 Score=23.06 Aligned_cols=35 Identities=9% Similarity=0.032 Sum_probs=24.5
Q ss_pred CccEEEEeCCc--------cHHHHHHHHhcCCeEEEecCcccc
Q 028423 170 GSKVLHLALYL--------KKLLFNLARDSLSSFSFYSIIITF 204 (209)
Q Consensus 170 ~~d~v~i~g~~--------~~~~~~~ar~~g~~vsfd~~~~~~ 204 (209)
+.++|+++... ++...++++++|+.+..|.+-.++
T Consensus 149 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~ 191 (398)
T 2rfv_A 149 ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSP 191 (398)
T ss_dssp TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCT
T ss_pred CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccc
Confidence 45677765432 356678899999999999965443
No 78
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=27.52 E-value=1.3e+02 Score=19.65 Aligned_cols=40 Identities=13% Similarity=0.091 Sum_probs=25.8
Q ss_pred HHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeE
Q 028423 109 GQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTM 148 (209)
Q Consensus 109 G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~ 148 (209)
=+.+.+.|++.|+...........-...+.+.||+|.+--
T Consensus 92 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie 131 (134)
T 3l7t_A 92 VEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLE 131 (134)
T ss_dssp HHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEE
T ss_pred HHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEE
Confidence 3567889999999876443332223455666688887643
No 79
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=26.83 E-value=1.2e+02 Score=20.87 Aligned_cols=41 Identities=12% Similarity=0.064 Sum_probs=27.3
Q ss_pred HHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEe
Q 028423 109 GQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMR 149 (209)
Q Consensus 109 G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~ 149 (209)
=+.+.+.|++.|+............+..+.+.||+|.+--+
T Consensus 98 ld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel 138 (141)
T 3ghj_A 98 IEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEF 138 (141)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEE
T ss_pred HHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEE
Confidence 35578899999998763322222235677778999987544
No 80
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=26.41 E-value=64 Score=24.01 Aligned_cols=35 Identities=11% Similarity=0.182 Sum_probs=0.0
Q ss_pred CCeEEEEEecC-------------ChhHHHHHHHHHhCCCccceeEecC
Q 028423 95 VPCGLIGAYGD-------------DQQGQLFVSNMQFSGVDVSRLRMKR 130 (209)
Q Consensus 95 ~~~~lig~VG~-------------D~~G~~i~~~L~~~GVd~~~v~~~~ 130 (209)
.+++++ .+|| |..|.++.+.|++.|+++....+.+
T Consensus 16 ~~v~ii-tvsd~~~~~~~~~g~i~D~ng~~L~~~L~~~G~~v~~~~iV~ 63 (178)
T 3iwt_A 16 LNFYVI-TISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVP 63 (178)
T ss_dssp CEEEEE-EECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CEEEEE-EEcCCCccccccCCCCCcchHHHHHHHHHHCCCEEEEEEEeC
No 81
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=25.87 E-value=1.8e+02 Score=23.20 Aligned_cols=17 Identities=0% Similarity=0.012 Sum_probs=12.8
Q ss_pred HHHHHHHHhcCCeEEEec
Q 028423 182 KLLFNLARDSLSSFSFYS 199 (209)
Q Consensus 182 ~~~~~~ar~~g~~vsfd~ 199 (209)
+...++|+++|+ +..|.
T Consensus 158 ~~i~~l~~~~~~-li~D~ 174 (382)
T 4hvk_A 158 EEISEVLAGKAA-LHIDA 174 (382)
T ss_dssp HHHHHHHSSSSE-EEEEC
T ss_pred HHHHHHHHHcCE-EEEEh
Confidence 456677788888 88886
No 82
>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}
Probab=25.84 E-value=1.5e+02 Score=20.00 Aligned_cols=43 Identities=9% Similarity=-0.091 Sum_probs=28.1
Q ss_pred HHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeecc
Q 028423 110 QLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL 152 (209)
Q Consensus 110 ~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~ 152 (209)
+.+.+.|++.|+....-......-...+.+.||+|.+--+..+
T Consensus 80 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~ 122 (137)
T 3itw_A 80 DEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRH 122 (137)
T ss_dssp HHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEEC
T ss_pred HHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEE
Confidence 5677889999987643222212234677778999998766543
No 83
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=25.11 E-value=1.8e+02 Score=22.92 Aligned_cols=32 Identities=13% Similarity=0.098 Sum_probs=22.5
Q ss_pred CccEEEEeCCc--------cHHHHHHHHhcCCeEEEecCc
Q 028423 170 GSKVLHLALYL--------KKLLFNLARDSLSSFSFYSII 201 (209)
Q Consensus 170 ~~d~v~i~g~~--------~~~~~~~ar~~g~~vsfd~~~ 201 (209)
+.++|+++... ++...++++++|+.+..|.+-
T Consensus 124 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~ 163 (353)
T 2yrr_A 124 RYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVT 163 (353)
T ss_dssp CCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTT
T ss_pred CCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCc
Confidence 45666665321 356678889999999999854
No 84
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=24.48 E-value=81 Score=22.74 Aligned_cols=42 Identities=10% Similarity=0.023 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhcCCCeEEEEEec--------------------CChhHHHHHHHHHhCCCccc
Q 028423 82 VTNTIRGLSVGFGVPCGLIGAYG--------------------DDQQGQLFVSNMQFSGVDVS 124 (209)
Q Consensus 82 a~N~A~~la~rLG~~~~lig~VG--------------------~D~~G~~i~~~L~~~GVd~~ 124 (209)
+.-.|..|+ ++|.++.++-+-. .....+.+.+.+++.||+..
T Consensus 13 Gl~~A~~l~-~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~ 74 (180)
T 2ywl_A 13 GLSAALFLA-RAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVR 74 (180)
T ss_dssp HHHHHHHHH-HTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHH-HCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 567788888 7999999996421 13456788888999998754
No 85
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=24.47 E-value=1e+02 Score=24.02 Aligned_cols=48 Identities=6% Similarity=0.010 Sum_probs=34.4
Q ss_pred cCchHHHHHHHHHHhcCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEe
Q 028423 78 AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM 128 (209)
Q Consensus 78 ~GG~a~N~A~~la~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~ 128 (209)
.||-+.-+|..|+ +.|.++.++++ +....+.+.+++++.|-....+..
T Consensus 16 s~GIG~aia~~l~-~~G~~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~ 63 (252)
T 3h7a_A 16 GDYIGAEIAKKFA-AEGFTVFAGRR--NGEKLAPLVAEIEAAGGRIVARSL 63 (252)
T ss_dssp SSHHHHHHHHHHH-HTTCEEEEEES--SGGGGHHHHHHHHHTTCEEEEEEC
T ss_pred CchHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHHHHhcCCeEEEEEC
Confidence 3555778889999 79999888766 234456788888888766655543
No 86
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=24.31 E-value=1.1e+02 Score=23.32 Aligned_cols=48 Identities=15% Similarity=0.167 Sum_probs=34.1
Q ss_pred cCchHHHHHHHHHHhcCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEe
Q 028423 78 AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM 128 (209)
Q Consensus 78 ~GG~a~N~A~~la~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~ 128 (209)
.||-+..+|..|+ +.|.++.++++ +....+.+.+.+++.+.+...+..
T Consensus 14 s~gIG~~~a~~l~-~~G~~v~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~ 61 (247)
T 3lyl_A 14 SRGIGFEVAHALA-SKGATVVGTAT--SQASAEKFENSMKEKGFKARGLVL 61 (247)
T ss_dssp SSHHHHHHHHHHH-HTTCEEEEEES--SHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CChHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHHHHhcCCceEEEEe
Confidence 3556778899999 79998877665 234456778888888876665543
No 87
>3uh9_A Metallothiol transferase FOSB 2; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol; HET: MSE; 1.60A {Bacillus anthracis}
Probab=24.29 E-value=1.1e+02 Score=20.91 Aligned_cols=44 Identities=9% Similarity=0.028 Sum_probs=29.1
Q ss_pred HHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeecc
Q 028423 109 GQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCL 152 (209)
Q Consensus 109 G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~ 152 (209)
=+.+.+.|++.|+....-.......+..+.+.||+|.+--+..+
T Consensus 76 ~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~ 119 (145)
T 3uh9_A 76 LDHLKEVLIQNDVNILPGRERDERDQRSLYFTDPDGHKFEFHTG 119 (145)
T ss_dssp HHHHHHHHHHTTCCBCCCCCCCGGGCCEEEEECTTCCEEEEESS
T ss_pred HHHHHHHHHHCCCeEecCCccCCCCeeEEEEEcCCCCEEEEEcC
Confidence 35678889999988753322222345666778999998766554
No 88
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=23.58 E-value=1.2e+02 Score=24.22 Aligned_cols=47 Identities=9% Similarity=0.010 Sum_probs=34.7
Q ss_pred chHHHHHHHHHHhcCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEec
Q 028423 80 GSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMK 129 (209)
Q Consensus 80 G~a~N~A~~la~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~ 129 (209)
|-+.-+|..++ +.|.++.+.++ +....+.+.+++++.|.+...+..+
T Consensus 18 GIG~aiA~~la-~~Ga~Vv~~~~--~~~~~~~~~~~i~~~g~~~~~~~~D 64 (254)
T 4fn4_A 18 GIGRAIAKKFA-LNDSIVVAVEL--LEDRLNQIVQELRGMGKEVLGVKAD 64 (254)
T ss_dssp HHHHHHHHHHH-HTTCEEEEEES--CHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHHH-HcCCEEEEEEC--CHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 44566788889 79999888665 3345678889999999877766543
No 89
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=23.21 E-value=1.3e+02 Score=23.33 Aligned_cols=48 Identities=10% Similarity=-0.035 Sum_probs=34.3
Q ss_pred cCchHHHHHHHHHHhcCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEe
Q 028423 78 AGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM 128 (209)
Q Consensus 78 ~GG~a~N~A~~la~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~ 128 (209)
.||-+..+|..|+ +.|.++.++++ +....+.+.+++++.|.+...+..
T Consensus 20 s~gIG~aia~~l~-~~G~~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~ 67 (264)
T 3ucx_A 20 GPALGTTLARRCA-EQGADLVLAAR--TVERLEDVAKQVTDTGRRALSVGT 67 (264)
T ss_dssp CTTHHHHHHHHHH-HTTCEEEEEES--CHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcHHHHHHHHHHH-HCcCEEEEEeC--CHHHHHHHHHHHHhcCCcEEEEEc
Confidence 3566788999999 79999887765 224456777888887766665543
No 90
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=22.97 E-value=1.2e+02 Score=24.06 Aligned_cols=47 Identities=11% Similarity=0.085 Sum_probs=32.9
Q ss_pred CchHHHHHHHHHHhcCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEe
Q 028423 79 GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM 128 (209)
Q Consensus 79 GG~a~N~A~~la~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~ 128 (209)
||-+..+|..|+ +.|.++.++++ +....+.+.+++++.|.....+..
T Consensus 42 ~GIG~aia~~la-~~G~~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~ 88 (276)
T 3r1i_A 42 TGIGKKVALAYA-EAGAQVAVAAR--HSDALQVVADEIAGVGGKALPIRC 88 (276)
T ss_dssp SHHHHHHHHHHH-HTTCEEEEEES--SGGGGHHHHHHHHHTTCCCEEEEC
T ss_pred CHHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHHHHhcCCeEEEEEc
Confidence 345667888888 79999888776 334456778888887766555543
No 91
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=22.84 E-value=2.8e+02 Score=21.83 Aligned_cols=51 Identities=6% Similarity=-0.121 Sum_probs=30.4
Q ss_pred CceEecCchHHHHHHHHHHhcCCCeEEEEEecCChhHHHHHHHHHhCCCccceeE
Q 028423 73 PIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLR 127 (209)
Q Consensus 73 ~~~~~~GG~a~N~A~~la~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~ 127 (209)
......||..++.++..+ -+ .+-.+ .+-.+.++....+.++..|+.+..+.
T Consensus 63 ~v~~~~g~t~al~~~~~~-l~-~~~~i--~~~~~~~~~~~~~~~~~~g~~~~~v~ 113 (362)
T 3ffr_A 63 EVLFLASATEIWERIIQN-CV-EKKSF--HCVNGSFSKRFYEFAGELGREAYKEE 113 (362)
T ss_dssp EEEEESCHHHHHHHHHHH-HC-SSEEE--EEECSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCchHHHHHHHHh-cc-CCcEE--EEcCcHHHHHHHHHHHHhCCCeEEEe
Confidence 355667888888777766 33 33222 23445677666667777777665443
No 92
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=22.76 E-value=2.9e+02 Score=22.02 Aligned_cols=99 Identities=12% Similarity=-0.019 Sum_probs=55.0
Q ss_pred eEecCchHHHHHHHHHHhcC-CCeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeeccc
Q 028423 75 KTIAGGSVTNTIRGLSVGFG-VPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLS 153 (209)
Q Consensus 75 ~~~~GG~a~N~A~~la~rLG-~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~g 153 (209)
....||+.++.+...+ -+. .+..++.. ...+|......++..|.....+... +++
T Consensus 78 ~~~~gg~~al~~~~~~-~~~~gd~vl~~~--~~~~~~~~~~~~~~~g~~~~~~~~~------------~~~--------- 133 (393)
T 3kgw_A 78 VVSGSGHCAMETALFN-LLEPGDSFLTGT--NGIWGMRAAEIADRIGARVHQMIKK------------PGE--------- 133 (393)
T ss_dssp EESCCTTTHHHHHHHH-HCCTTCEEEEEE--SSHHHHHHHHHHHHTTCEEEEEECC------------TTC---------
T ss_pred EEeCCcHHHHHHHHHh-cCCCCCEEEEEe--CCchhHHHHHHHHHcCCceEEEeCC------------CCC---------
Confidence 4557888887666655 343 23344442 3356666677777777655433221 111
Q ss_pred cccCCCccccchhhcC-CccEEEEeCCc--------cHHHHHHHHhcCCeEEEecC
Q 028423 154 NAVKIQADELIAEDVK-GSKVLHLALYL--------KKLLFNLARDSLSSFSFYSI 200 (209)
Q Consensus 154 ~~~~l~~~~i~~~~i~-~~d~v~i~g~~--------~~~~~~~ar~~g~~vsfd~~ 200 (209)
.++.+++....-+ +.++|++.... ++...++++++|+.+..|.+
T Consensus 134 ---~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~ 186 (393)
T 3kgw_A 134 ---HYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSV 186 (393)
T ss_dssp ---CCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECT
T ss_pred ---CCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECC
Confidence 1223333221111 45666665421 35677889999999999974
No 93
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=22.22 E-value=3.4e+02 Score=22.59 Aligned_cols=32 Identities=9% Similarity=0.001 Sum_probs=23.9
Q ss_pred CccEEEEeCCc--------cHHHHHHHHhcCCeEEEecCc
Q 028423 170 GSKVLHLALYL--------KKLLFNLARDSLSSFSFYSII 201 (209)
Q Consensus 170 ~~d~v~i~g~~--------~~~~~~~ar~~g~~vsfd~~~ 201 (209)
+.++|+++... ++...++||++|+.+..|.+-
T Consensus 144 ~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~ 183 (421)
T 2ctz_A 144 KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTF 183 (421)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGG
T ss_pred CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCc
Confidence 46677775432 356778899999999999865
No 94
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=21.98 E-value=1.6e+02 Score=23.20 Aligned_cols=46 Identities=11% Similarity=0.055 Sum_probs=32.4
Q ss_pred CchHHHHHHHHHHhcCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEe
Q 028423 79 GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM 128 (209)
Q Consensus 79 GG~a~N~A~~la~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~ 128 (209)
||-+..+|..|+ +.|.++.+++ .+...+...+++++.+.....+..
T Consensus 41 ~GIG~aia~~la-~~G~~V~~~~---r~~~~~~~~~~~~~~~~~~~~~~~ 86 (273)
T 3uf0_A 41 SGIGRAIAHGYA-RAGAHVLAWG---RTDGVKEVADEIADGGGSAEAVVA 86 (273)
T ss_dssp SHHHHHHHHHHH-HTTCEEEEEE---SSTHHHHHHHHHHTTTCEEEEEEC
T ss_pred cHHHHHHHHHHH-HCCCEEEEEc---CHHHHHHHHHHHHhcCCcEEEEEe
Confidence 345668888899 7999988776 344566777788877766655543
No 95
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=21.92 E-value=1e+02 Score=27.04 Aligned_cols=48 Identities=15% Similarity=0.241 Sum_probs=35.3
Q ss_pred eEecCc--hHHHHHHHHHHhcCCCeEEEEEec------CChhHHHHHHHHHhCCCccc
Q 028423 75 KTIAGG--SVTNTIRGLSVGFGVPCGLIGAYG------DDQQGQLFVSNMQFSGVDVS 124 (209)
Q Consensus 75 ~~~~GG--~a~N~A~~la~rLG~~~~lig~VG------~D~~G~~i~~~L~~~GVd~~ 124 (209)
....|| .++-.|..++ ++|.++.++.. + +....+.+.+.|++.||++.
T Consensus 213 vvVIGgG~ig~E~A~~l~-~~G~~Vtlv~~-~~~l~~~d~~~~~~~~~~l~~~GV~v~ 268 (519)
T 3qfa_A 213 TLVVGASYVALECAGFLA-GIGLDVTVMVR-SILLRGFDQDMANKIGEHMEEHGIKFI 268 (519)
T ss_dssp EEEECCSHHHHHHHHHHH-HTTCCEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred EEEECCcHHHHHHHHHHH-HcCCeEEEEec-ccccccCCHHHHHHHHHHHHHCCCEEE
Confidence 334444 3456788888 79999999865 2 23577889999999999875
No 96
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=21.68 E-value=1.7e+02 Score=18.89 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=24.1
Q ss_pred HHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeE
Q 028423 110 QLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTM 148 (209)
Q Consensus 110 ~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~ 148 (209)
+.+.+.|++.|+...........-...+.+.||+|.+--
T Consensus 85 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie 123 (126)
T 2p25_A 85 EEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLE 123 (126)
T ss_dssp HHHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEE
T ss_pred HHHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEE
Confidence 446788999998875433322222245556788887643
No 97
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=21.62 E-value=77 Score=25.51 Aligned_cols=44 Identities=16% Similarity=0.197 Sum_probs=31.7
Q ss_pred eEecCchHHHHHHHHHHhcCCCeEEEEEecCChhH---HHHHHHHHhC
Q 028423 75 KTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQG---QLFVSNMQFS 119 (209)
Q Consensus 75 ~~~~GG~a~N~A~~la~rLG~~~~lig~VG~D~~G---~~i~~~L~~~ 119 (209)
....|+.+.-+|..++ +.|++++-||..+.|.++ +..++.+.+.
T Consensus 20 ~~~~g~~p~~aa~~a~-~~gi~v~tIGig~~~~~~~~~~~~L~~IA~~ 66 (242)
T 3rag_A 20 CSNIGPDPVEAARRAH-RHGIVVNVIGIVGRGDAGEQGYQEAHSIADA 66 (242)
T ss_dssp CCCSSSCHHHHHHHHH-HTTCEEEEEEECCSSSCTTCCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHH-HCCCEEEEEEecCCccccchhHHHHHHHHHh
Confidence 3446678888898888 799999999996665443 3556666554
No 98
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=21.50 E-value=73 Score=26.30 Aligned_cols=20 Identities=25% Similarity=0.200 Sum_probs=17.8
Q ss_pred HHHHHHHHHHhcCCCeEEEEE
Q 028423 82 VTNTIRGLSVGFGVPCGLIGA 102 (209)
Q Consensus 82 a~N~A~~la~rLG~~~~lig~ 102 (209)
++|.|.+|| ++|.+|.++..
T Consensus 65 avNLA~aLA-~~GkkVllID~ 84 (314)
T 3fwy_A 65 SSNLSAAFS-ILGKRVLQIGC 84 (314)
T ss_dssp HHHHHHHHH-HTTCCEEEEEE
T ss_pred HHHHHHHHH-HCCCeEEEEec
Confidence 689999999 79999988865
No 99
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=21.46 E-value=94 Score=26.50 Aligned_cols=44 Identities=16% Similarity=0.278 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHhcCCCeEEEEEec------CChhHHHHHHHHHhCCCccce
Q 028423 81 SVTNTIRGLSVGFGVPCGLIGAYG------DDQQGQLFVSNMQFSGVDVSR 125 (209)
Q Consensus 81 ~a~N~A~~la~rLG~~~~lig~VG------~D~~G~~i~~~L~~~GVd~~~ 125 (209)
.+.-.|..++ ++|.++.++..-. +....+.+.+.|++.||+...
T Consensus 181 ~g~e~A~~l~-~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~ 230 (455)
T 1ebd_A 181 IGIELGTAYA-NFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVT 230 (455)
T ss_dssp HHHHHHHHHH-HTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHH-HcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEe
Confidence 3466788888 7999999987532 234678889999999998653
No 100
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=21.45 E-value=1.8e+02 Score=21.72 Aligned_cols=41 Identities=20% Similarity=0.033 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhcCCCeEEEEEecCChh--HHHHHHHHHhCCCcc
Q 028423 82 VTNTIRGLSVGFGVPCGLIGAYGDDQQ--GQLFVSNMQFSGVDV 123 (209)
Q Consensus 82 a~N~A~~la~rLG~~~~lig~VG~D~~--G~~i~~~L~~~GVd~ 123 (209)
+.-.+..|. ++|.++...+.++||.. .+.+.+.+++.+.|.
T Consensus 42 ~~~L~~~l~-~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~Dl 84 (178)
T 2pjk_A 42 GDIIKQLLI-ENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDV 84 (178)
T ss_dssp HHHHHHHHH-HTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCE
T ss_pred HHHHHHHHH-HCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCE
Confidence 345566777 69999999999999952 233444443334443
No 101
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=20.87 E-value=1.6e+02 Score=21.56 Aligned_cols=40 Identities=13% Similarity=0.011 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhcCCCeEEEEEecCCh--hHHHHHHHHHhCCCc
Q 028423 82 VTNTIRGLSVGFGVPCGLIGAYGDDQ--QGQLFVSNMQFSGVD 122 (209)
Q Consensus 82 a~N~A~~la~rLG~~~~lig~VG~D~--~G~~i~~~L~~~GVd 122 (209)
+.-.+..|. ++|.++...+.++||. ..+.+.+.+++.+.|
T Consensus 23 ~~~l~~~l~-~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~D 64 (164)
T 2is8_A 23 HLAIREVLA-GGPFEVAAYELVPDEPPMIKKVLRLWADREGLD 64 (164)
T ss_dssp HHHHHHHHT-TSSEEEEEEEEECSCHHHHHHHHHHHHHTSCCS
T ss_pred HHHHHHHHH-HCCCeEeEEEEcCCCHHHHHHHHHHHHhcCCCC
Confidence 345666777 6899999999999994 334454444432444
No 102
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=20.74 E-value=2.2e+02 Score=20.69 Aligned_cols=42 Identities=10% Similarity=0.133 Sum_probs=31.5
Q ss_pred CeEEEEEecCC-----hhHHHHHHHHHhCCCccceeEecCCCCeeEEEE
Q 028423 96 PCGLIGAYGDD-----QQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCL 139 (209)
Q Consensus 96 ~~~lig~VG~D-----~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~ 139 (209)
.++.++.+|.+ .....+.+.|.++||+..++.. .....++++
T Consensus 102 ~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~ist--se~~is~vv 148 (167)
T 2re1_A 102 TVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMIST--SEIKVSVLI 148 (167)
T ss_dssp SEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEEE--CSSEEEEEE
T ss_pred CEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEEc--ccCEEEEEE
Confidence 47889999987 3567899999999999998752 344555554
No 103
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=20.72 E-value=1e+02 Score=25.06 Aligned_cols=23 Identities=26% Similarity=0.150 Sum_probs=17.7
Q ss_pred CchHHHHHHHHHHhcCCCeEEEEE
Q 028423 79 GGSVTNTIRGLSVGFGVPCGLIGA 102 (209)
Q Consensus 79 GG~a~N~A~~la~rLG~~~~lig~ 102 (209)
|-.++-+|..|+ +.|.++.++-+
T Consensus 12 G~~Gl~~A~~La-~~G~~V~vie~ 34 (389)
T 2gf3_A 12 GSMGMAAGYQLA-KQGVKTLLVDA 34 (389)
T ss_dssp SHHHHHHHHHHH-HTTCCEEEECS
T ss_pred CHHHHHHHHHHH-hCCCeEEEEeC
Confidence 335578889999 79999998843
No 104
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=20.71 E-value=30 Score=23.90 Aligned_cols=40 Identities=20% Similarity=0.328 Sum_probs=29.6
Q ss_pred CchHHHHHHHHHHhcCCCeEEEEEecCChhHHHHHHHHHhCCCccc
Q 028423 79 GGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVS 124 (209)
Q Consensus 79 GG~a~N~A~~la~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~ 124 (209)
+|.+...+..|+ ..|+++.+.+.+|... .+.|++.||.+-
T Consensus 48 ~g~g~~~~~~l~-~~gv~~vi~~~iG~~a-----~~~L~~~GI~v~ 87 (116)
T 1rdu_A 48 HGTGPKVVQSLV-SKGVEYLIASNVGRNA-----FETLKAAGVKVY 87 (116)
T ss_dssp CCSSCSHHHHHH-TTTCCEEECSSCCSSC-----HHHHHTTTCEEE
T ss_pred CCccHHHHHHHH-HcCCCEEEECCCCHhH-----HHHHHHCCCEEE
Confidence 343446677778 6899999999888774 567888888763
No 105
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=20.61 E-value=1.3e+02 Score=22.61 Aligned_cols=34 Identities=12% Similarity=-0.192 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhcCCCeEEEEEecCChhHHHHHHHHHh
Q 028423 82 VTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQF 118 (209)
Q Consensus 82 a~N~A~~la~rLG~~~~lig~VG~D~~G~~i~~~L~~ 118 (209)
+.-.+..|. ++|.++...+.|+||. +.+.+.|++
T Consensus 25 ~~~l~~~L~-~~G~~v~~~~iv~Dd~--~~I~~~l~~ 58 (172)
T 3kbq_A 25 AAFIGNFLT-YHGYQVRRGFVVMDDL--DEIGWAFRV 58 (172)
T ss_dssp HHHHHHHHH-HTTCEEEEEEEECSCH--HHHHHHHHH
T ss_pred HHHHHHHHH-HCCCEEEEEEEeCCCH--HHHHHHHHH
Confidence 345667778 6999999999999985 334444433
No 106
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=20.53 E-value=2.6e+02 Score=20.98 Aligned_cols=25 Identities=28% Similarity=0.549 Sum_probs=20.4
Q ss_pred EEEecCChhHHHHHHHHHhCCCccc
Q 028423 100 IGAYGDDQQGQLFVSNMQFSGVDVS 124 (209)
Q Consensus 100 ig~VG~D~~G~~i~~~L~~~GVd~~ 124 (209)
++.+|-...|..+-..|.+.|.++.
T Consensus 22 I~iiG~G~mG~~la~~l~~~g~~V~ 46 (209)
T 2raf_A 22 ITIFGKGNMGQAIGHNFEIAGHEVT 46 (209)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEE
Confidence 6777888999999999998886544
No 107
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=20.36 E-value=1.1e+02 Score=26.29 Aligned_cols=42 Identities=21% Similarity=0.259 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhcCCCeEEEEEec------CChhHHHHHHHHHhCCCccce
Q 028423 82 VTNTIRGLSVGFGVPCGLIGAYG------DDQQGQLFVSNMQFSGVDVSR 125 (209)
Q Consensus 82 a~N~A~~la~rLG~~~~lig~VG------~D~~G~~i~~~L~~~GVd~~~ 125 (209)
+.=.|..++ ++|.++.++.. + +....+.+.+.|++.||++..
T Consensus 199 g~E~A~~l~-~~g~~Vtlv~~-~~~l~~~d~~~~~~l~~~l~~~Gv~i~~ 246 (483)
T 3dgh_A 199 GLECAGFLK-GLGYEPTVMVR-SIVLRGFDQQMAELVAASMEERGIPFLR 246 (483)
T ss_dssp HHHHHHHHH-HTTCEEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHH-HcCCEEEEEeC-CCCCcccCHHHHHHHHHHHHhCCCEEEe
Confidence 456778888 79999999865 2 335678899999999998753
No 108
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=20.05 E-value=1.5e+02 Score=23.36 Aligned_cols=46 Identities=20% Similarity=0.161 Sum_probs=31.8
Q ss_pred chHHHHHHHHHHhcCCCeEEEEEecCChhHHHHHHHHHhCCCccceeEe
Q 028423 80 GSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRM 128 (209)
Q Consensus 80 G~a~N~A~~la~rLG~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~ 128 (209)
|-+.-+|..|+ +.|.++.++++ +....+.+.+.|++.|.+...+..
T Consensus 35 GIG~aia~~la-~~G~~V~~~~r--~~~~~~~~~~~l~~~~~~~~~~~~ 80 (279)
T 3sju_A 35 GIGLAVARTLA-ARGIAVYGCAR--DAKNVSAAVDGLRAAGHDVDGSSC 80 (279)
T ss_dssp HHHHHHHHHHH-HTTCEEEEEES--CHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred HHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHHHHhcCCcEEEEEC
Confidence 44667888889 79999877654 223456777888887776665543
Done!