Query 028427
Match_columns 209
No_of_seqs 126 out of 180
Neff 3.3
Searched_HMMs 46136
Date Fri Mar 29 11:22:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028427.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028427hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02777 photosystem I P subun 100.0 5.1E-34 1.1E-38 238.7 7.3 90 117-206 76-166 (167)
2 PF14159 CAAD: CAAD domains of 100.0 7.1E-30 1.5E-34 194.2 2.6 84 122-205 2-90 (90)
3 PF11364 DUF3165: Protein of u 57.6 2.8 6E-05 32.5 -0.5 58 133-190 23-80 (81)
4 TIGR00949 2A76 The Resistance 47.4 4.4 9.6E-05 32.7 -0.9 36 149-184 39-74 (185)
5 PF11351 DUF3154: Protein of u 46.0 12 0.00026 29.9 1.4 20 164-183 97-116 (123)
6 PRK10520 rhtB homoserine/homos 45.7 4.9 0.00011 33.3 -0.9 39 147-185 55-93 (205)
7 TIGR00948 2a75 L-lysine export 43.8 6.3 0.00014 31.9 -0.5 39 147-185 38-76 (177)
8 PRK10958 leucine export protei 43.3 5.6 0.00012 33.6 -0.9 35 150-184 62-96 (212)
9 PRK10229 threonine efflux syst 39.3 7.2 0.00016 32.2 -0.8 36 149-184 56-91 (206)
10 PF01810 LysE: LysE type trans 38.9 10 0.00022 30.6 -0.0 42 149-190 44-85 (191)
11 PRK09304 arginine exporter pro 35.4 9.1 0.0002 32.0 -0.8 34 151-184 56-89 (207)
12 PRK10323 cysteine/O-acetylseri 30.2 12 0.00026 31.1 -0.9 45 141-185 48-93 (195)
13 PF06716 DUF1201: Protein of u 28.3 33 0.00072 24.6 1.2 34 135-188 7-40 (54)
14 PRK07193 fliF flagellar MS-rin 25.5 71 0.0015 31.8 3.3 17 115-131 3-19 (552)
15 PF06072 Herpes_US9: Alphaherp 24.9 1.8E+02 0.0039 21.6 4.5 46 112-157 6-55 (60)
16 PF05251 UPF0197: Uncharacteri 23.3 8.2 0.00018 29.6 -2.8 35 161-195 17-51 (77)
17 KOG2927 Membrane component of 21.7 42 0.00091 32.4 0.9 43 140-182 224-278 (372)
18 PLN02777 photosystem I P subun 20.7 94 0.002 27.0 2.7 61 112-175 78-138 (167)
No 1
>PLN02777 photosystem I P subunit (PSI-P)
Probab=100.00 E-value=5.1e-34 Score=238.71 Aligned_cols=90 Identities=36% Similarity=0.764 Sum_probs=87.9
Q ss_pred hHHHHHHhhhhccc-cCcchhhhhhHHHHHHHHHHHHHHHHhccCCCccchheeeeeeeeeeehhhhcccccchHHHHHH
Q 028427 117 TNELLDNLKIKFDS-EDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATK 195 (209)
Q Consensus 117 ~~Evl~~L~~kwd~-e~K~~v~l~g~gaiVal~v~~aVL~AIdsIPLLp~lLELVGLgYt~WFvyRyLLf~e~RqEL~~k 195 (209)
.+|+++.++++||. |||++++++++++||++|++.+||+|||+|||+|++||||||||++||+||||+|+++|+||+++
T Consensus 76 ~~ei~k~~~e~Wd~~EdK~av~~l~~aaiVal~v~~~VL~AId~lPLlP~lLELVGigYs~WF~yRyLLfke~ReeL~~k 155 (167)
T PLN02777 76 LPEIVKTVQEAWDKVEDKYAVSSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFAYKNLVFKPDREALIEK 155 (167)
T ss_pred HHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHhhhhhhhhhhhhHhcCcccHHHHHHH
Confidence 56999999999995 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcCC
Q 028427 196 IEELKQQVLGS 206 (209)
Q Consensus 196 I~~lk~~IlG~ 206 (209)
|+++|++|+|+
T Consensus 156 i~~lk~~IlG~ 166 (167)
T PLN02777 156 IKDTYKEIIGS 166 (167)
T ss_pred HHHHHHHhhCC
Confidence 99999999996
No 2
>PF14159 CAAD: CAAD domains of cyanobacterial aminoacyl-tRNA synthetase
Probab=99.95 E-value=7.1e-30 Score=194.21 Aligned_cols=84 Identities=49% Similarity=0.890 Sum_probs=72.9
Q ss_pred HHhhhhccc-cCcchhhhhhH----HHHHHHHHHHHHHHHhccCCCccchheeeeeeeeeeehhhhcccccchHHHHHHH
Q 028427 122 DNLKIKFDS-EDKYSLVLYGT----GALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKI 196 (209)
Q Consensus 122 ~~L~~kwd~-e~K~~v~l~g~----gaiVal~v~~aVL~AIdsIPLLp~lLELVGLgYt~WFvyRyLLf~e~RqEL~~kI 196 (209)
++++++|+. .++|...++++ ++++++|++.+|++|||+|||+|++|||||+||++||+||||+++++||||.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~ii~~iv~l~v~~~vl~aIn~iPll~~llElvGlgyt~wF~~ryLL~~~~R~el~~~i 81 (90)
T PF14159_consen 2 SKLPEYWGEFFDKYKRPLLTIGAIIAVIVALWVSAAVLDAINSIPLLPGLLELVGLGYTGWFVYRYLLFAENRQELLQKI 81 (90)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHhHHHHHHHcChHhHHHHHHHH
Confidence 445555653 45555554444 5599999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcC
Q 028427 197 EELKQQVLG 205 (209)
Q Consensus 197 ~~lk~~IlG 205 (209)
+++|++|+|
T Consensus 82 ~~~k~~i~G 90 (90)
T PF14159_consen 82 QSLKKEILG 90 (90)
T ss_pred HHHHHHhcC
Confidence 999999998
No 3
>PF11364 DUF3165: Protein of unknown function (DUF3165); InterPro: IPR021506 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=57.57 E-value=2.8 Score=32.51 Aligned_cols=58 Identities=17% Similarity=0.224 Sum_probs=49.3
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHhccCCCccchheeeeeeeeeeehhhhcccccchH
Q 028427 133 KYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRD 190 (209)
Q Consensus 133 K~~v~l~g~gaiVal~v~~aVL~AIdsIPLLp~lLELVGLgYt~WFvyRyLLf~e~Rq 190 (209)
|.++=.++..+++++.++.++++.+.-.-+-|-+|=-+|+...++|.+|.+.+=++|+
T Consensus 23 r~Tln~i~~v~~~vlLivla~ls~~ki~q~P~Eifv~~~Mi~l~y~alrDi~~l~~k~ 80 (81)
T PF11364_consen 23 RGTLNMIGLVGLVVLLIVLAVLSFIKIFQLPPEIFVGLAMIVLGYFALRDISKLSTKK 80 (81)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCcCC
Confidence 4566677888888899999999999988888999999999999999999888766653
No 4
>TIGR00949 2A76 The Resistance to Homoserine/Threonine (RhtB) Family protein.
Probab=47.37 E-value=4.4 Score=32.66 Aligned_cols=36 Identities=11% Similarity=0.161 Sum_probs=30.0
Q ss_pred HHHHHHHHhccCCCccchheeeeeeeeeeehhhhcc
Q 028427 149 LTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLL 184 (209)
Q Consensus 149 v~~aVL~AIdsIPLLp~lLELVGLgYt~WFvyRyLL 184 (209)
...++-.-++..|.+-..+.++|-.|..|+.||-+.
T Consensus 39 ~~~Gl~~l~~~~~~~~~~l~~~Ga~yLl~lg~~~~~ 74 (185)
T TIGR00949 39 SLLGLAVLISKSVILFTVIKWLGGAYLIYLGIKMLR 74 (185)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566677788999999999999999999998664
No 5
>PF11351 DUF3154: Protein of unknown function (DUF3154); InterPro: IPR021497 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=46.04 E-value=12 Score=29.94 Aligned_cols=20 Identities=25% Similarity=0.260 Sum_probs=17.3
Q ss_pred cchheeeeeeeeeeehhhhc
Q 028427 164 PKLMEVVGLGYTLWFSWRYL 183 (209)
Q Consensus 164 p~lLELVGLgYt~WFvyRyL 183 (209)
.++..|.|+|++++|+.|..
T Consensus 97 e~lw~Llg~~vlgy~~~Rs~ 116 (123)
T PF11351_consen 97 EPLWWLLGAGVLGYFGARSQ 116 (123)
T ss_pred HHHHHHHHHHHhhhHHHhhH
Confidence 47789999999999999854
No 6
>PRK10520 rhtB homoserine/homoserine lactone efflux protein; Provisional
Probab=45.74 E-value=4.9 Score=33.29 Aligned_cols=39 Identities=10% Similarity=0.181 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhccCCCccchheeeeeeeeeeehhhhccc
Q 028427 147 LWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLF 185 (209)
Q Consensus 147 l~v~~aVL~AIdsIPLLp~lLELVGLgYt~WFvyRyLLf 185 (209)
.....++-.-++..|.+=.++.++|.+|..|+.+|-+..
T Consensus 55 ~~~~~Gl~~l~~~~p~~~~~lk~~Ga~YL~~lg~~~~~s 93 (205)
T PRK10520 55 VLVGVGLGALFSQSLLAFEVLKWAGAAYLIWLGIQQWRA 93 (205)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 334456666778899999999999999999999997754
No 7
>TIGR00948 2a75 L-lysine exporter.
Probab=43.81 E-value=6.3 Score=31.90 Aligned_cols=39 Identities=13% Similarity=0.176 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhccCCCccchheeeeeeeeeeehhhhccc
Q 028427 147 LWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLF 185 (209)
Q Consensus 147 l~v~~aVL~AIdsIPLLp~lLELVGLgYt~WFvyRyLLf 185 (209)
+....++-..++..|.+=..+.++|-.|..|..||-+..
T Consensus 38 ~~~~~Gl~~ll~~~p~~~~~l~~~Ga~YLlylg~~~~r~ 76 (177)
T TIGR00948 38 AAGVFGVAALLAASPILLAVLTWGGALFLLWYGFLAAKT 76 (177)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455556678899999999999999999999987654
No 8
>PRK10958 leucine export protein LeuE; Provisional
Probab=43.28 E-value=5.6 Score=33.57 Aligned_cols=35 Identities=20% Similarity=0.429 Sum_probs=29.1
Q ss_pred HHHHHHHhccCCCccchheeeeeeeeeeehhhhcc
Q 028427 150 TTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLL 184 (209)
Q Consensus 150 ~~aVL~AIdsIPLLp~lLELVGLgYt~WFvyRyLL 184 (209)
..++-.-+...|.+-..+.++|.+|..|+.||-+-
T Consensus 62 ~~G~~~l~~~~p~~~~~l~~~G~~yL~~la~~~~~ 96 (212)
T PRK10958 62 AAGVASLLKATPLLFNVVKYLGAAYLLYLGVKMLR 96 (212)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555667788999999999999999999998663
No 9
>PRK10229 threonine efflux system; Provisional
Probab=39.29 E-value=7.2 Score=32.24 Aligned_cols=36 Identities=14% Similarity=0.241 Sum_probs=30.0
Q ss_pred HHHHHHHHhccCCCccchheeeeeeeeeeehhhhcc
Q 028427 149 LTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLL 184 (209)
Q Consensus 149 v~~aVL~AIdsIPLLp~lLELVGLgYt~WFvyRyLL 184 (209)
...++-.-+...|.+-.++.++|..|..|+.|+-+.
T Consensus 56 ~~~Gl~~ll~~~p~~~~~l~~~Ga~yLlylg~~~~~ 91 (206)
T PRK10229 56 ALLGLHLILEKMAWLHTIIMVGGGLYLCWMGYQMLR 91 (206)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 335565667888999999999999999999998775
No 10
>PF01810 LysE: LysE type translocator; InterPro: IPR001123 Lysine exporter protein is involved in the efflux of excess L-lysine as a control for intracellular levels of L-lysine. A number of proteins belong to this family. These include the chemotactic transduction protein from Pseudomonas aeruginosa, the threonine efflux protein and a number of uncharacterised proteins from a variety of sources.; GO: 0006865 amino acid transport, 0016020 membrane
Probab=38.95 E-value=10 Score=30.61 Aligned_cols=42 Identities=17% Similarity=0.288 Sum_probs=32.0
Q ss_pred HHHHHHHHhccCCCccchheeeeeeeeeeehhhhcccccchH
Q 028427 149 LTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRD 190 (209)
Q Consensus 149 v~~aVL~AIdsIPLLp~lLELVGLgYt~WFvyRyLLf~e~Rq 190 (209)
...++-.-++..|.+-..++++|..|..|+.|+.+..+.+.+
T Consensus 44 ~~~g~~~l~~~~~~~~~~l~~~G~~~L~~lg~~~~~~~~~~~ 85 (191)
T PF01810_consen 44 AVFGLSALLKSSPWLFMILKLLGALYLLYLGYKLLRSKFSSK 85 (191)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcccCcc
Confidence 333443344679999999999999999999999887554443
No 11
>PRK09304 arginine exporter protein; Provisional
Probab=35.37 E-value=9.1 Score=32.05 Aligned_cols=34 Identities=15% Similarity=0.298 Sum_probs=28.3
Q ss_pred HHHHHHhccCCCccchheeeeeeeeeeehhhhcc
Q 028427 151 TVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLL 184 (209)
Q Consensus 151 ~aVL~AIdsIPLLp~lLELVGLgYt~WFvyRyLL 184 (209)
.++-.-+...|.+=.++.++|..|..|..|+-+-
T Consensus 56 ~Gl~~Ll~~~p~~~~~l~~~Ga~YLlyLg~~~~r 89 (207)
T PRK09304 56 FGGSALLMQSPWLLALVTWGGVAFLLWYGFGAFK 89 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444457899999999999999999999998664
No 12
>PRK10323 cysteine/O-acetylserine exporter; Provisional
Probab=30.16 E-value=12 Score=31.11 Aligned_cols=45 Identities=20% Similarity=0.411 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHH-HHhccCCCccchheeeeeeeeeeehhhhccc
Q 028427 141 TGALLALWLTTVVV-GAIDSIPLFPKLMEVVGLGYTLWFSWRYLLF 185 (209)
Q Consensus 141 ~gaiVal~v~~aVL-~AIdsIPLLp~lLELVGLgYt~WFvyRyLLf 185 (209)
.|.++...+..+.+ .-+...|.+=.++.++|..|..|..||-+..
T Consensus 48 ~g~~~~~~~~~~g~~~l~~~~p~~~~vlk~~Ga~YLlyLg~~~~~s 93 (195)
T PRK10323 48 LGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATS 93 (195)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34333333333444 3456889999999999999999999997753
No 13
>PF06716 DUF1201: Protein of unknown function (DUF1201); InterPro: IPR009591 This entry consists of several Beet yellows virus (BYV) putative membrane-binding proteins of around 54 residues in length. The function of this currently unknown.
Probab=28.30 E-value=33 Score=24.62 Aligned_cols=34 Identities=35% Similarity=0.763 Sum_probs=24.7
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHhccCCCccchheeeeeeeeeeehhhhcccccc
Q 028427 135 SLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKN 188 (209)
Q Consensus 135 ~v~l~g~gaiVal~v~~aVL~AIdsIPLLp~lLELVGLgYt~WFvyRyLLf~e~ 188 (209)
+.+.+|+|.++-+.+.-.+ |-.||+|+.+||..+
T Consensus 7 s~L~~~F~~lIC~Fl~~~~--------------------~F~~F~~Kqilfr~~ 40 (54)
T PF06716_consen 7 SYLLLAFGFLICLFLFCLV--------------------VFIWFVYKQILFRNN 40 (54)
T ss_pred HHHHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHccC
Confidence 5567788887777765543 568999999987654
No 14
>PRK07193 fliF flagellar MS-ring protein; Reviewed
Probab=25.48 E-value=71 Score=31.81 Aligned_cols=17 Identities=47% Similarity=0.743 Sum_probs=13.1
Q ss_pred chhHHHHHHhhhhcccc
Q 028427 115 GLTNELLDNLKIKFDSE 131 (209)
Q Consensus 115 ~q~~Evl~~L~~kwd~e 131 (209)
+.+++++.+++++|..-
T Consensus 3 ~~~~~~~~~l~~~w~~l 19 (552)
T PRK07193 3 GLMNDMLDKLKQKWSPF 19 (552)
T ss_pred hhHHHHHHHHHHHHHhh
Confidence 45678899999988754
No 15
>PF06072 Herpes_US9: Alphaherpesvirus tegument protein US9; InterPro: IPR009278 This family consists of several US9 and related proteins from the Alphaherpesviruses. The function of the US9 protein is unknown although in Bovine herpesvirus 5 Us9 is essential for the anterograde spread of the virus from the olfactory mucosa to the bulb [].; GO: 0019033 viral tegument
Probab=24.91 E-value=1.8e+02 Score=21.56 Aligned_cols=46 Identities=15% Similarity=0.111 Sum_probs=28.3
Q ss_pred CCcchhHHHHHHhhhhcc---ccCcchh-hhhhHHHHHHHHHHHHHHHHh
Q 028427 112 PVDGLTNELLDNLKIKFD---SEDKYSL-VLYGTGALLALWLTTVVVGAI 157 (209)
Q Consensus 112 ~v~~q~~Evl~~L~~kwd---~e~K~~v-~l~g~gaiVal~v~~aVL~AI 157 (209)
++++.++|+|..++..=. .-.+... .+.++.+++++-++++.++++
T Consensus 6 SDnETA~~FL~RvGr~q~~~r~RrRrc~~~v~~v~~~~~~c~~S~~lG~~ 55 (60)
T PF06072_consen 6 SDNETATEFLRRVGRQQHASRRRRRRCRLAVAIVFAVVALCVLSGGLGAL 55 (60)
T ss_pred cccccHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457778999998872110 1122233 344455666778888888876
No 16
>PF05251 UPF0197: Uncharacterised protein family (UPF0197); InterPro: IPR007915 This family of proteins is functionally uncharacterised, but is thought to be a transmembrane protein.
Probab=23.30 E-value=8.2 Score=29.55 Aligned_cols=35 Identities=23% Similarity=0.413 Sum_probs=24.6
Q ss_pred CCccchheeeeeeeeeeehhhhcccccchHHHHHH
Q 028427 161 PLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATK 195 (209)
Q Consensus 161 PLLp~lLELVGLgYt~WFvyRyLLf~e~RqEL~~k 195 (209)
|.+.-+|=.+|+.+++||........+.++.+.++
T Consensus 17 p~La~vll~iGl~fta~Ffiyevts~k~~r~i~kE 51 (77)
T PF05251_consen 17 PHLAVVLLAIGLFFTAWFFIYEVTSTKKTRSIAKE 51 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCcccccHHHH
Confidence 45555667789999999998888866554444443
No 17
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.68 E-value=42 Score=32.37 Aligned_cols=43 Identities=35% Similarity=0.509 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHHHHHHHh------------ccCCCccchheeeeeeeeeeehhhh
Q 028427 140 GTGALLALWLTTVVVGAI------------DSIPLFPKLMEVVGLGYTLWFSWRY 182 (209)
Q Consensus 140 g~gaiVal~v~~aVL~AI------------dsIPLLp~lLELVGLgYt~WFvyRy 182 (209)
|+|+|++++++.++|..| -.+=++|-|+|=||+.=+-|=.|-|
T Consensus 224 g~~gfl~~IlvLaIvRlILF~I~~il~~g~~g~W~FPNL~eDvGfleSF~PLy~~ 278 (372)
T KOG2927|consen 224 GAGGFLAFILVLAIVRLILFGITWILTGGKHGFWLFPNLTEDVGFLESFKPLYEY 278 (372)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEeccchhhhhhHHHhhcccccc
Confidence 444566666666665555 3455899999999998776444443
No 18
>PLN02777 photosystem I P subunit (PSI-P)
Probab=20.67 E-value=94 Score=27.04 Aligned_cols=61 Identities=18% Similarity=0.170 Sum_probs=45.5
Q ss_pred CCcchhHHHHHHhhhhccccCcchhhhhhHHHHHHHHHHHHHHHHhccCCCccchheeeeeeee
Q 028427 112 PVDGLTNELLDNLKIKFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYT 175 (209)
Q Consensus 112 ~v~~q~~Evl~~L~~kwd~e~K~~v~l~g~gaiVal~v~~aVL~AIdsIPLLp~lLELVGLgYt 175 (209)
.+...+.|.+++..+||..- .+++.++.++.+...+...||.|=-+|-+=-|.=++=.+|-
T Consensus 78 ei~k~~~e~Wd~~EdK~av~---~l~~aaiVal~v~~~VL~AId~lPLlP~lLELVGigYs~WF 138 (167)
T PLN02777 78 EIVKTVQEAWDKVEDKYAVS---SLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWF 138 (167)
T ss_pred HHHHHHHHHHhhhcchhHHH---HHHHHHHHHHHHHHHHHHHHhccccccchHHHhhhhhhhhh
Confidence 44556789999999888754 78888888888888888889999888876555544444433
Done!